Query 007552
Match_columns 599
No_of_seqs 348 out of 2715
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 04:37:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007552.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007552hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 2.9E-93 1E-97 795.9 64.6 551 10-577 29-604 (605)
2 3d2f_A Heat shock protein homo 100.0 4.9E-93 1.7E-97 799.7 60.9 556 13-578 32-627 (675)
3 2kho_A Heat shock protein 70; 100.0 1.6E-91 5.3E-96 782.0 55.9 548 13-577 32-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 1.2E-86 4E-91 735.9 47.8 503 14-517 35-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 1.7E-75 5.8E-80 641.6 48.2 471 13-507 32-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 9.6E-56 3.3E-60 472.6 39.3 333 13-346 53-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 6.2E-55 2.1E-59 464.8 39.1 335 10-345 45-394 (394)
8 4gni_A Putative heat shock pro 100.0 4.6E-53 1.6E-57 452.6 32.9 333 12-347 42-404 (409)
9 1dkg_D Molecular chaperone DNA 100.0 2.9E-51 1E-55 434.8 36.3 326 14-345 33-383 (383)
10 4e81_A Chaperone protein DNAK; 100.0 6.6E-38 2.3E-42 302.5 26.3 215 356-577 2-216 (219)
11 1u00_A HSC66, chaperone protei 100.0 1.6E-35 5.4E-40 288.7 27.5 215 358-579 1-215 (227)
12 1jce_A ROD shape-determining p 100.0 4.5E-36 1.6E-40 313.4 18.6 285 17-345 28-327 (344)
13 3n8e_A Stress-70 protein, mito 100.0 5.2E-31 1.8E-35 245.9 15.6 165 352-517 17-181 (182)
14 3h0x_A 78 kDa glucose-regulate 100.0 1.2E-28 4.3E-33 224.1 17.5 151 357-507 2-152 (152)
15 3dob_A Heat shock 70 kDa prote 100.0 9E-29 3.1E-33 224.6 15.6 151 357-507 2-152 (152)
16 3dqg_A Heat shock 70 kDa prote 100.0 1.6E-28 5.3E-33 222.8 14.2 150 357-507 2-151 (151)
17 2op6_A Heat shock 70 kDa prote 99.9 1.3E-26 4.5E-31 211.9 16.4 151 357-507 2-152 (152)
18 3h1q_A Ethanolamine utilizatio 99.9 2E-24 6.9E-29 217.5 19.1 203 82-341 70-272 (272)
19 2fsj_A Hypothetical protein TA 99.9 1.1E-24 3.6E-29 226.9 10.1 228 78-342 94-343 (346)
20 4a2a_A Cell division protein F 99.9 1.7E-22 5.8E-27 214.9 20.0 240 73-343 47-393 (419)
21 2ych_A Competence protein PILM 99.9 1.8E-22 6.1E-27 213.0 12.1 217 77-324 96-335 (377)
22 1q5l_A Chaperone protein DNAK; 99.9 3.1E-21 1.1E-25 171.7 12.3 119 352-470 14-132 (135)
23 1k8k_A ARP3, actin-like protei 99.8 3.1E-21 1.1E-25 206.3 12.8 227 104-343 107-387 (418)
24 2fxu_A Alpha-actin-1, actin, a 99.8 3.9E-21 1.3E-25 202.5 12.5 221 105-342 101-348 (375)
25 2zgy_A Plasmid segregation pro 99.8 4.2E-19 1.4E-23 182.9 8.5 228 77-341 72-319 (320)
26 1k8k_B ARP2, actin-like protei 99.6 2.9E-16 1E-20 166.2 4.1 214 105-342 105-363 (394)
27 4ehu_A Activator of 2-hydroxyi 99.6 8.4E-15 2.9E-19 147.4 13.0 230 59-344 18-255 (276)
28 3js6_A Uncharacterized PARM pr 99.6 1.9E-15 6.4E-20 157.2 7.8 206 105-346 114-339 (355)
29 3lof_A Heat shock 70 kDa prote 99.4 5.4E-13 1.9E-17 115.0 10.9 85 495-580 3-87 (113)
30 4apw_A ALP12; actin-like prote 99.4 8.6E-14 2.9E-18 143.4 6.9 202 105-343 106-324 (329)
31 2p32_A Heat shock 70 kDa prote 99.2 7.2E-12 2.5E-16 109.0 6.6 89 496-585 13-101 (120)
32 3dwl_A Actin-related protein 3 99.2 1.4E-11 4.7E-16 131.0 7.2 222 105-342 124-395 (427)
33 1ud0_A HSC70, 70 kDa heat-shoc 99.2 2.5E-11 8.5E-16 104.6 6.5 85 499-584 2-86 (113)
34 2d0o_A DIOL dehydratase-reacti 99.1 2E-11 6.9E-16 128.4 3.9 197 117-342 367-603 (610)
35 1nbw_A Glycerol dehydratase re 99.1 3.1E-11 1.1E-15 127.4 3.8 195 119-342 371-605 (607)
36 3qb0_A Actin-related protein 4 99.0 5.2E-10 1.8E-14 120.2 10.5 93 106-207 116-209 (498)
37 4fo0_A Actin-related protein 8 98.8 6.9E-08 2.4E-12 107.4 15.5 111 88-207 176-293 (593)
38 1hux_A Activator of (R)-2-hydr 98.2 1.7E-05 5.9E-10 78.8 14.2 73 267-344 185-257 (270)
39 4am6_A Actin-like protein ARP8 98.1 6.4E-06 2.2E-10 89.7 9.3 139 87-241 197-346 (655)
40 2ews_A Pantothenate kinase; PA 97.2 0.0032 1.1E-07 62.5 13.2 76 261-341 207-286 (287)
41 2i7n_A Pantothenate kinase 1; 96.9 0.0096 3.3E-07 60.8 13.1 47 295-341 306-358 (360)
42 3l0q_A Xylulose kinase; xlylul 96.1 0.0085 2.9E-07 65.6 7.6 87 259-347 407-493 (554)
43 2itm_A Xylulose kinase, xylulo 96.1 0.0073 2.5E-07 64.9 6.8 82 261-346 356-437 (484)
44 4bc3_A Xylulose kinase; transf 96.0 0.011 3.7E-07 64.5 7.8 77 267-345 407-483 (538)
45 2zf5_O Glycerol kinase; hypert 95.9 0.013 4.4E-07 63.3 7.6 76 268-346 368-443 (497)
46 3hz6_A Xylulokinase; xylulose, 95.8 0.012 4.2E-07 63.6 7.3 80 261-347 374-454 (511)
47 3ll3_A Gluconate kinase; xylul 95.8 0.013 4.4E-07 63.3 7.2 81 262-347 364-444 (504)
48 3i8b_A Xylulose kinase; strain 95.7 0.01 3.5E-07 64.3 6.2 78 262-347 395-475 (515)
49 3g25_A Glycerol kinase; IDP007 95.3 0.016 5.6E-07 62.5 6.0 81 262-347 374-455 (501)
50 2dpn_A Glycerol kinase; thermu 95.2 0.028 9.6E-07 60.5 7.5 80 262-346 368-448 (495)
51 3jvp_A Ribulokinase; PSI-II, N 95.2 0.017 5.8E-07 63.5 5.8 80 262-346 410-490 (572)
52 3ifr_A Carbohydrate kinase, FG 95.2 0.016 5.4E-07 62.7 5.3 52 294-347 400-451 (508)
53 4e1j_A Glycerol kinase; struct 95.1 0.015 5.3E-07 63.0 4.8 52 294-347 425-476 (520)
54 3ezw_A Glycerol kinase; glycer 95.1 0.031 1.1E-06 60.7 7.3 53 293-347 401-453 (526)
55 3h3n_X Glycerol kinase; ATP-bi 95.1 0.02 6.8E-07 61.9 5.7 52 294-347 403-454 (506)
56 2p3r_A Glycerol kinase; glycer 95.0 0.019 6.4E-07 62.2 5.1 52 294-347 401-452 (510)
57 3mdq_A Exopolyphosphatase; str 94.9 0.32 1.1E-05 48.9 13.7 76 121-201 93-170 (315)
58 2d4w_A Glycerol kinase; alpha 94.8 0.025 8.4E-07 61.1 5.4 51 294-346 403-453 (504)
59 1t6c_A Exopolyphosphatase; alp 94.7 0.1 3.6E-06 52.4 9.4 76 121-201 101-177 (315)
60 2w40_A Glycerol kinase, putati 94.5 0.033 1.1E-06 60.1 5.6 52 294-347 406-458 (503)
61 2uyt_A Rhamnulokinase; rhamnos 94.0 0.045 1.6E-06 58.8 5.5 47 294-343 393-439 (489)
62 3eno_A Putative O-sialoglycopr 94.0 1.9 6.5E-05 43.5 17.0 69 273-346 233-306 (334)
63 2e2o_A Hexokinase; acetate and 92.5 4.1 0.00014 40.0 16.8 49 294-343 239-287 (299)
64 3r8e_A Hypothetical sugar kina 92.1 0.67 2.3E-05 46.5 10.4 88 80-174 55-161 (321)
65 3h6e_A Carbohydrate kinase, FG 91.9 0.2 6.7E-06 53.6 6.4 71 267-343 362-435 (482)
66 2ivn_A O-sialoglycoprotein end 91.6 12 0.00041 37.5 20.3 64 275-343 230-298 (330)
67 4db3_A Glcnac kinase, N-acetyl 91.3 13 0.00043 37.1 22.1 88 80-174 59-163 (327)
68 3vgl_A Glucokinase; ROK family 90.6 12 0.0004 37.2 17.9 88 79-174 35-139 (321)
69 2ch5_A NAGK protein; transfera 88.6 21 0.00071 35.6 18.9 84 80-169 44-133 (347)
70 2hoe_A N-acetylglucosamine kin 88.5 16 0.00055 37.1 17.4 89 80-174 123-229 (380)
71 3en9_A Glycoprotease, O-sialog 88.0 11 0.00039 40.4 16.5 207 79-318 44-272 (540)
72 3cer_A Possible exopolyphospha 87.7 0.98 3.4E-05 45.8 7.3 115 78-201 62-191 (343)
73 2ap1_A Putative regulator prot 87.0 18 0.0006 35.9 16.3 88 80-174 59-163 (327)
74 3hi0_A Putative exopolyphospha 86.2 1.5 5.2E-05 47.0 8.1 115 78-200 60-178 (508)
75 1u6z_A Exopolyphosphatase; alp 84.5 2.4 8.2E-05 45.5 8.7 113 78-201 56-176 (513)
76 2qm1_A Glucokinase; alpha-beta 84.4 33 0.0011 33.7 19.6 90 80-174 42-151 (326)
77 1z6r_A MLC protein; transcript 83.7 35 0.0012 34.9 17.2 90 80-174 120-229 (406)
78 3ven_A O-carbamoyltransferase 81.8 50 0.0017 35.6 17.6 80 263-347 280-361 (576)
79 3qbx_A Anhydro-N-acetylmuramic 81.5 3.1 0.00011 42.3 7.5 72 269-343 261-336 (371)
80 1z05_A Transcriptional regulat 77.0 71 0.0024 32.9 17.1 90 80-174 143-251 (429)
81 3ttc_A HYPF, transcriptional r 75.3 4.8 0.00016 44.3 7.3 50 294-343 599-651 (657)
82 3cqy_A Anhydro-N-acetylmuramic 74.0 5.4 0.00019 40.5 6.8 70 268-343 267-342 (370)
83 3vth_A Hydrogenase maturation 72.7 3.8 0.00013 45.9 5.8 52 294-345 693-749 (761)
84 4g9i_A Hydrogenase maturation 70.9 8.8 0.0003 43.2 8.2 61 278-343 694-759 (772)
85 3aap_A Ectonucleoside triphosp 68.4 6.9 0.00024 39.7 6.2 44 131-175 108-158 (353)
86 2gup_A ROK family protein; sug 66.4 14 0.00047 35.9 7.9 50 294-343 227-287 (292)
87 4htl_A Beta-glucoside kinase; 59.2 17 0.00057 35.6 6.9 50 294-343 237-291 (297)
88 3cet_A Conserved archaeal prot 58.8 6.1 0.00021 39.5 3.5 38 135-175 108-145 (334)
89 2aa4_A Mannac kinase, putative 55.7 14 0.00048 35.8 5.7 48 294-341 233-286 (289)
90 2e1z_A Propionate kinase; TDCD 54.0 1.7E+02 0.0057 30.0 13.3 26 293-318 329-355 (415)
91 1sz2_A Glucokinase, glucose ki 53.5 1.7E+02 0.0058 28.6 15.9 71 101-175 64-156 (332)
92 1zc6_A Probable N-acetylglucos 53.1 12 0.0004 36.9 4.6 64 269-342 227-292 (305)
93 3cj1_A Ectonucleoside triphosp 53.1 23 0.00078 37.2 6.9 43 133-175 150-208 (456)
94 3zx3_A Ectonucleoside triphosp 49.4 48 0.0016 34.6 8.6 95 80-175 83-199 (452)
95 2zqm_A Prefoldin beta subunit 49.3 74 0.0025 25.9 8.4 52 529-584 65-116 (117)
96 1zbs_A Hypothetical protein PG 47.2 11 0.00038 36.7 3.3 67 269-343 211-280 (291)
97 3htv_A D-allose kinase, alloki 45.9 41 0.0014 33.0 7.3 50 293-342 238-298 (310)
98 2cpt_A SKD1 protein, vacuolar 45.6 1.3E+02 0.0044 24.9 9.1 14 556-569 71-84 (117)
99 3vov_A Glucokinase, hexokinase 44.7 38 0.0013 33.1 6.8 87 82-174 37-141 (302)
100 1saz_A Probable butyrate kinas 44.2 15 0.00053 37.4 3.9 49 294-342 295-347 (381)
101 3o8m_A Hexokinase; rnaseh-like 43.8 69 0.0024 33.7 8.9 25 155-179 78-102 (485)
102 3sk3_A Acetate kinase, acetoki 43.3 1.5E+02 0.0051 30.4 11.0 26 293-318 338-364 (415)
103 4ijn_A Acetate kinase, acetoki 40.8 2.4E+02 0.0082 28.7 11.9 26 293-318 322-348 (398)
104 2yhx_A Hexokinase B; transfera 38.8 1.2E+02 0.0041 31.6 9.8 26 155-180 59-84 (457)
105 1hnj_A Beta-ketoacyl-acyl carr 36.8 43 0.0015 32.8 5.8 48 269-319 212-259 (317)
106 4am6_A Actin-like protein ARP8 36.2 17 0.00057 39.7 2.7 24 295-318 501-524 (655)
107 4gic_A HDH, histidinol dehydro 35.7 37 0.0013 34.8 5.0 71 104-175 160-249 (423)
108 1zxo_A Conserved hypothetical 35.5 6.2 0.00021 38.6 -0.8 66 271-342 211-277 (291)
109 3bex_A Type III pantothenate k 34.3 77 0.0026 30.0 6.9 45 262-307 179-223 (249)
110 1msz_A DNA-binding protein smu 33.0 41 0.0014 26.3 3.8 28 107-134 34-61 (86)
111 2yhw_A Bifunctional UDP-N-acet 31.3 94 0.0032 30.7 7.3 90 80-174 64-174 (343)
112 1ub7_A 3-oxoacyl-[acyl-carrier 30.8 57 0.0019 31.9 5.5 45 271-318 216-260 (322)
113 2q2r_A Glucokinase 1, putative 30.8 50 0.0017 33.2 5.2 67 80-147 67-144 (373)
114 2ebd_A 3-oxoacyl-[acyl-carrier 30.7 61 0.0021 31.4 5.7 44 272-318 207-250 (309)
115 3epq_A Putative fructokinase; 30.1 59 0.002 31.7 5.4 43 130-174 97-140 (302)
116 4fla_A Regulation of nuclear P 28.7 1.8E+02 0.0063 25.2 7.7 46 530-575 96-144 (152)
117 3f9m_A Glucokinase; hexokinase 27.1 1.5E+02 0.0051 31.0 8.0 25 155-179 75-99 (470)
118 3zyy_X Iron-sulfur cluster bin 25.2 1.1E+02 0.0037 33.4 6.7 47 259-306 500-546 (631)
119 2x3e_A 3-oxoacyl-[acyl-carrier 24.9 63 0.0022 31.8 4.6 44 272-318 221-264 (331)
120 3r9p_A ACKA; ssgcid, seattle s 24.5 5.6E+02 0.019 25.9 12.6 43 272-318 296-339 (391)
121 1zow_A 3-oxoacyl-[acyl-carrier 24.4 68 0.0023 31.2 4.7 46 270-318 207-252 (313)
122 1mzj_A Beta-ketoacylsynthase I 24.0 58 0.002 32.2 4.2 44 272-318 228-271 (339)
123 2qm1_A Glucokinase; alpha-beta 22.9 1.8E+02 0.0062 28.1 7.6 26 157-182 6-31 (326)
124 3eno_A Putative O-sialoglycopr 22.7 1.3E+02 0.0046 29.7 6.5 44 271-314 50-93 (334)
125 2wl8_A Peroxisomal biogenesis 22.6 1.9E+02 0.0065 24.3 6.3 24 534-557 34-58 (126)
126 2nr5_A Hypothetical protein SO 22.0 1.3E+02 0.0044 20.8 4.1 25 525-549 39-63 (67)
127 1kae_A HDH, histidinol dehydro 21.6 92 0.0031 32.0 5.0 46 104-153 154-200 (434)
128 3nq4_A 6,7-dimethyl-8-ribityll 20.8 97 0.0033 27.1 4.3 61 272-342 25-86 (156)
129 1bdg_A Hexokinase; phosphotran 20.6 2.3E+02 0.0078 29.4 8.0 24 155-178 66-89 (451)
130 4dfe_A 3-oxoacyl-[acyl-carrier 20.5 1.4E+02 0.0048 29.3 6.2 47 269-318 228-274 (333)
131 2ivn_A O-sialoglycoprotein end 20.5 1.4E+02 0.0049 29.3 6.2 43 270-312 44-86 (330)
132 1t0c_A Insulin; type I beta-tu 20.2 37 0.0012 20.0 0.9 9 579-587 12-20 (31)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=2.9e-93 Score=795.91 Aligned_cols=551 Identities=50% Similarity=0.802 Sum_probs=518.7
Q ss_pred hhcccccCceEEecCCC-cccccc---------------cchhhccCCCCChHHHHhhccCCcEEEe-cCCceEEEEEEe
Q 007552 10 NASFFKCLFICVDFSPL-KKKGGW---------------RLIEFVFARFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIR 72 (599)
Q Consensus 10 ~~~~~r~~p~~v~~~~~-~~~~~~---------------~~k~llG~~~~d~~~~~~~~~~~~~~v~-~~g~~~~~v~~~ 72 (599)
|..-.|.||++|+|.+. .+..|+ ++|||||++|+|+.++.+.+.|||+++. .+|.+.+.+
T Consensus 29 n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~--- 105 (605)
T 4b9q_A 29 NAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--- 105 (605)
T ss_dssp CTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHHHHHHHTTCSSEEEECTTSBEEEEE---
T ss_pred CCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHHHHHHhhcCCeEEEEcCCCceEEEE---
Confidence 55667999999999754 455543 7999999999999999999999999996 677766654
Q ss_pred CCceeEechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhcccc
Q 007552 73 DGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDK 152 (599)
Q Consensus 73 ~g~~~~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~ 152 (599)
+| +.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++.|||+++++++||+|||++|+...
T Consensus 106 ~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~ 183 (605)
T 4b9q_A 106 KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK 183 (605)
T ss_dssp TT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTS
T ss_pred CC--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhc
Confidence 56 6899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCccEEEEEEcCCCEEEEEEEEEeC----CeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHH
Q 007552 153 KGGEKNILVFDLGGGTFDVSILTIDN----GVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLR 228 (599)
Q Consensus 153 ~~~~~~vlVvD~Gggt~dvsv~~~~~----~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~ 228 (599)
...+.+++|||+||||||++++++.+ +.++++++.++.++||.+||..|++|+.++|+.+++.++..+++++.+|+
T Consensus 184 ~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~ 263 (605)
T 4b9q_A 184 GTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLK 263 (605)
T ss_dssp CCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHH
T ss_pred cCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHH
Confidence 66678999999999999999999988 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcceEEEEecccCC----ccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCC
Q 007552 229 REAERAKRALSSQHQVRVEIESLFDG----IDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGS 304 (599)
Q Consensus 229 ~~~e~~K~~Ls~~~~~~i~i~~l~~~----~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~ 304 (599)
.+||++|+.||....+.+.++.+..+ .++.++|||++|++++.|+++++..+|+++|+.+++...+|+.|+||||+
T Consensus 264 ~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~ 343 (605)
T 4b9q_A 264 EAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQ 343 (605)
T ss_dssp HHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGG
T ss_pred HHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCc
Confidence 99999999999999998888766543 67889999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcCCCCCCCcceEEeeecccccceEeeCCeeEEEEeCCCCC
Q 007552 305 TRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVI 384 (599)
Q Consensus 305 srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~g~~i 384 (599)
||+|+|++.|++.| +.++..+.||++|||+|||++|+.+++. .+++.+.|++|++||+++.+|.|.++||+|++|
T Consensus 344 sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l~dv~p~slgie~~~g~~~~ii~rnt~i 418 (605)
T 4b9q_A 344 TRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTI 418 (605)
T ss_dssp GGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEEECBCSSCEEEEETTTEEEEEECTTCBS
T ss_pred cCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEEEeeeeeEEEEEEcCCEEEEEEeCCCcC
Confidence 99999999999999 7888999999999999999999999987 568999999999999999999999999999999
Q ss_pred CCcceeeeeeccCCceeEEEEEEecCCcccccCccceeEEecCCCCCCCCCCeEEEEEEEcCCceEEEEEeecCCCceeE
Q 007552 385 PTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEK 464 (599)
Q Consensus 385 P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~~~~~~~ 464 (599)
|++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||.|.|.++|+|+|++|.||+|+|++.+..||+..+
T Consensus 419 P~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~ 498 (605)
T 4b9q_A 419 PTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQK 498 (605)
T ss_dssp SEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTSCEEEEEEETTTCCEEC
T ss_pred CcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcCCcEEEEEEEecCCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhccHHHHHHHHHHHhchhhhhhccCCHHHHHHHHHHHHHHHH
Q 007552 465 ITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALE 544 (599)
Q Consensus 465 ~~i~~~~~~l~~~~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~i~~~~~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~ 544 (599)
++|++. ..||++++++++++++++..+|+..+++.+++|+||+|+|++++.|++ +.+++++++++++...++++++
T Consensus 499 i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 574 (605)
T 4b9q_A 499 ITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALET 574 (605)
T ss_dssp CEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHH
T ss_pred EEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhCCHHHHHHHHHHHHHHHH
Confidence 999887 689999999999999999999999999999999999999999999975 7788999999999999999999
Q ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 007552 545 WLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 577 (599)
Q Consensus 545 WL~~~~~~t~~~~~~kl~~L~~~~~~i~~r~~e 577 (599)
||+.+ +.++|++++++|++.+.|+..++++
T Consensus 575 ~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 575 ALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99987 6899999999999999999999875
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=4.9e-93 Score=799.65 Aligned_cols=556 Identities=27% Similarity=0.446 Sum_probs=518.1
Q ss_pred ccccCceEEecCCCcccccc---------------cchhhccCCCCChHHHHhhccCCcEEEe-cCCceEEEEEEeCCce
Q 007552 13 FFKCLFICVDFSPLKKKGGW---------------RLIEFVFARFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGET 76 (599)
Q Consensus 13 ~~r~~p~~v~~~~~~~~~~~---------------~~k~llG~~~~d~~~~~~~~~~~~~~v~-~~g~~~~~v~~~~g~~ 76 (599)
=.|.||++|+|.+..+..|+ ++|||||++++|+.++.+.++|||+++. .+|.+.+.+.+ .|+.
T Consensus 32 g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~v~~~~~g~~~~~~~~-~g~~ 110 (675)
T 3d2f_A 32 SNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRF-AGEK 110 (675)
T ss_dssp SCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHHHHHTTCCSEEEECTTSBEEEEEEE-TTEE
T ss_pred CCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHHHHHhhCCeeEEEcCCCceEEEEEe-CCCC
Confidence 35899999999988877775 5699999999999999999999999996 68899999888 8878
Q ss_pred eEechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhccccC---
Q 007552 77 KVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK--- 153 (599)
Q Consensus 77 ~~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~--- 153 (599)
+.|+|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++.||++++++++||+|||++|++.+.
T Consensus 111 ~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~ 190 (675)
T 3d2f_A 111 HVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLP 190 (675)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCC
T ss_pred ceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999988653
Q ss_pred ---CCccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHH
Q 007552 154 ---GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRRE 230 (599)
Q Consensus 154 ---~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 230 (599)
..+.++||||+||||||+|++++.++.++++++.|+.++||++||+.|++|+.++|+++++.++..+++++.+|+.+
T Consensus 191 ~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~ 270 (675)
T 3d2f_A 191 EGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTA 270 (675)
T ss_dssp CSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHH
T ss_pred cccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 24678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCcceEEEEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHH
Q 007552 231 AERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKV 310 (599)
Q Consensus 231 ~e~~K~~Ls~~~~~~i~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v 310 (599)
||++|+.||...++.+.++.+.++.++.++|||++|+++|.|+++++..+|+++|+++++++.+|+.|+||||+||+|+|
T Consensus 271 aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v 350 (675)
T 3d2f_A 271 AEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTL 350 (675)
T ss_dssp HHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHH
T ss_pred HHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHH
Confidence 99999999999888999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcCCCCCCCcceEEeeecccccceEeeCC----eeEEEEeCCCCCCC
Q 007552 311 QQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGG----VMTKLIPRNTVIPT 386 (599)
Q Consensus 311 ~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~~~~~~~~~~~~d~~~~s~gi~~~~~----~~~~ii~~g~~iP~ 386 (599)
++.|++.| +.++..+.||++|||+|||++|+.+++. ++++++.+.|++|++||+++.++ .+.++||+|++||+
T Consensus 351 ~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~~--~~v~~~~l~Dv~p~slgi~~~~~~~~~~~~~li~rnt~iP~ 427 (675)
T 3d2f_A 351 KQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPT--LRVRPFKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPS 427 (675)
T ss_dssp HHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCSS--CCCCCCEEEEEECSCEEEEECCTTCSCSEEEEECTTEEESE
T ss_pred HHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCCC--CcccceEEEeeeecceEeeecCCCCCcceEEEEcCCCCCCc
Confidence 99999999 6788889999999999999999999987 45788999999999999999876 49999999999999
Q ss_pred cceeeeeeccCCceeEEEEE-EecCCcccc-cCccceeEEecCCCCCCCCCC-eEEEEEEEcCCceEEEEEe--------
Q 007552 387 KKSQVFTTYQDQQTTVSIQV-FEGERSLTK-DCRLLGKFDLSGIPPAPRGTP-QIEVTFEVDANGILNVKAE-------- 455 (599)
Q Consensus 387 ~~~~~~~~~~d~q~~~~i~i-~~g~~~~~~-~~~~lg~~~l~~~~~~~~g~~-~i~v~f~~d~~g~l~v~~~-------- 455 (599)
+++.+|++..+++ +.+ |+|++..+. +|..||+|.|.|+||.|.|.+ +|+|+|++|.||+|+|++.
T Consensus 428 ~k~~~f~~~~~~~----~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~ 503 (675)
T 3d2f_A 428 TKLITLNRTGDFS----MAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEA 503 (675)
T ss_dssp EEEEEEEESSCEE----EEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEEEEEEEECTTSCEEEEEEEEECC---
T ss_pred ccceeeeecCCce----EEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceEEEEEEEcCCCcEEEEEEEEeecccc
Confidence 9999998876543 444 679888887 899999999999999999985 9999999999999999995
Q ss_pred --ecCCCceeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhccHHHHHHHHHHHhchhhhhhccCCHHHHH
Q 007552 456 --DKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKD 533 (599)
Q Consensus 456 --~~~~~~~~~~~i~~~~~~l~~~~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~i~~~~~~l~~~~~~~~~~~~~e~~ 533 (599)
++.+|+..+++|+....+||++++++++++++++..+|+..+++.+++|+||+|+|++|+.|.+ .+.+++++++++
T Consensus 504 ~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~--~~~~~~~~~~~~ 581 (675)
T 3d2f_A 504 GSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEE--EYAPFASDAEKT 581 (675)
T ss_dssp ---CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TTGGGSCHHHHH
T ss_pred cccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhCCHHHHH
Confidence 6888999999999875689999999999999999999999999999999999999999999976 388899999999
Q ss_pred HHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007552 534 KIETAVKEALEWLDDN-QSAEKEDYEEKLKEVEAVCNPIITAVYQR 578 (599)
Q Consensus 534 ~i~~~l~e~~~WL~~~-~~~t~~~~~~kl~~L~~~~~~i~~r~~e~ 578 (599)
++...|+++++|||++ .+++.++|++++++|+++++||..|++|+
T Consensus 582 ~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~ 627 (675)
T 3d2f_A 582 KLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAK 627 (675)
T ss_dssp HHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999876 57899999999999999999999998886
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.6e-91 Score=782.00 Aligned_cols=548 Identities=50% Similarity=0.805 Sum_probs=512.7
Q ss_pred ccccCceEEecCC-Ccccccc---------------cchhhccCCCCChHHHHhhccCCcEEE-ecCCceEEEEEEeCCc
Q 007552 13 FFKCLFICVDFSP-LKKKGGW---------------RLIEFVFARFEDKEVQRDMKLAPYKIV-NRDGKPYIQVQIRDGE 75 (599)
Q Consensus 13 ~~r~~p~~v~~~~-~~~~~~~---------------~~k~llG~~~~d~~~~~~~~~~~~~~v-~~~g~~~~~v~~~~g~ 75 (599)
=.|.||++|+|.. ..+..|+ ++||+||++|+|+.++.+.+.|||+++ ..+|.+.+.+ +|
T Consensus 32 g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~---~g- 107 (605)
T 2kho_A 32 GDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV---KG- 107 (605)
T ss_dssp SCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTHHHHHHHCSSCEEECTTSBEEEEE---TT-
T ss_pred CCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHHHHHhhcCCeEEEECCCCceEEEE---CC-
Confidence 3589999999954 3444443 689999999999999999999999998 4778777665 67
Q ss_pred eeEechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhccccCCC
Q 007552 76 TKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGG 155 (599)
Q Consensus 76 ~~~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~ 155 (599)
+.++|++|++++|++|++.|+.+++.++.++|||||++|++.||+++++|++.||++++++++||+|||++|+.+....
T Consensus 108 -~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~~~ 186 (605)
T 2kho_A 108 -QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTG 186 (605)
T ss_dssp -EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSSSS
T ss_pred -EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHhhhcccCC
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999876535
Q ss_pred ccEEEEEEcCCCEEEEEEEEEe----CCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHH
Q 007552 156 EKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREA 231 (599)
Q Consensus 156 ~~~vlVvD~Gggt~dvsv~~~~----~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 231 (599)
+.++||||+||||||+|++++. ++.++++++.|+.++||++||+.|++|+.++|+++++.++..+++++.+|+.+|
T Consensus 187 ~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~a 266 (605)
T 2kho_A 187 NRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAA 266 (605)
T ss_dssp EEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHH
T ss_pred CCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHH
Confidence 7899999999999999999998 789999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHccCCcceEEEEecccCC----ccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCc
Q 007552 232 ERAKRALSSQHQVRVEIESLFDG----IDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRI 307 (599)
Q Consensus 232 e~~K~~Ls~~~~~~i~i~~l~~~----~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sri 307 (599)
|++|+.||....+.+.++.+.++ .++.++|||++|+++|+|+++++..+|+++|+++++.+.+|+.|+||||+|++
T Consensus 267 E~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~sri 346 (605)
T 2kho_A 267 EKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRM 346 (605)
T ss_dssp HHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGS
T ss_pred HHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccC
Confidence 99999999999888888866542 46778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcCCCCCCCcceEEeeecccccceEeeCCeeEEEEeCCCCCCCc
Q 007552 308 PKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTK 387 (599)
Q Consensus 308 p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~ 387 (599)
|+|++.|++.| +.++....||++|||+|||++|+.+++. .+++.+.|++|++||+++.+|.|.++|++|++||++
T Consensus 347 p~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~l~dv~p~slgi~~~~g~~~~li~r~t~iP~~ 421 (605)
T 2kho_A 347 PMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTK 421 (605)
T ss_dssp HHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCCCSBCCCCCEEEEETTTEEEEEECTTBCSSEE
T ss_pred hHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCceEEeeeeeeccccccCCceEEEEecccccCcc
Confidence 99999999999 6788899999999999999999999876 568899999999999999999999999999999999
Q ss_pred ceeeeeeccCCceeEEEEEEecCCcccccCccceeEEecCCCCCCCCCCeEEEEEEEcCCceEEEEEeecCCCceeEEEE
Q 007552 388 KSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITI 467 (599)
Q Consensus 388 ~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i 467 (599)
++.+|++..|+|+.+.|.+|+|++..+.+|..||+|.|.++||.|.|.++|+|+|.+|.||+|+|++.+..+|+..+++|
T Consensus 422 ~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i 501 (605)
T 2kho_A 422 HSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITI 501 (605)
T ss_dssp EEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEE
T ss_pred ceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEcCCCceeEEEEEcCCCceeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhccHHHHHHHHHHHhchhhhhhccCCHHHHHHHHHHHHHHHHHHh
Q 007552 468 TNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLD 547 (599)
Q Consensus 468 ~~~~~~l~~~~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~i~~~~~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~ 547 (599)
++. ..||++++++++++++++..+|+..+++.+++|+||+|+|++++.|.+ +.+++++++++++...++++++||+
T Consensus 502 ~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~---~~~~~~~~~~~~i~~~~~~~~~~l~ 577 (605)
T 2kho_A 502 KAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALK 577 (605)
T ss_dssp CTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred ccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhccCCHHHHHHHHHHHHHHHHHHh
Confidence 987 889999999999999999999999999999999999999999999976 7889999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 007552 548 DNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 577 (599)
Q Consensus 548 ~~~~~t~~~~~~kl~~L~~~~~~i~~r~~e 577 (599)
.+ +.++|++++++|+++++||..|+++
T Consensus 578 ~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 578 GE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp SS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred cC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 65 8999999999999999999999875
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.2e-86 Score=735.91 Aligned_cols=503 Identities=65% Similarity=0.993 Sum_probs=477.9
Q ss_pred cccCceEEecCCCcccccc---------------cchhhccCCCCChHHHHhhccCCcEEEecCCceEEEEEEeCCceeE
Q 007552 14 FKCLFICVDFSPLKKKGGW---------------RLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKV 78 (599)
Q Consensus 14 ~r~~p~~v~~~~~~~~~~~---------------~~k~llG~~~~d~~~~~~~~~~~~~~v~~~g~~~~~v~~~~g~~~~ 78 (599)
.|.||++|+|.+..+..|+ ++|||||++|+|+.++.+++.|||.+++.+|.+.+.+.+ +|..+.
T Consensus 35 ~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~v~~~~g~~~~~v~~-~~~~~~ 113 (554)
T 1yuw_A 35 NRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEY-KGETKS 113 (554)
T ss_dssp CSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHHHHHTTCSSEEEEETTEEEEEEEE-TTEEEE
T ss_pred CeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHHHHhhcCCeEEEecCCceEEEEEE-CCCceE
Confidence 4899999999888777774 589999999999999999999999999888999999988 888889
Q ss_pred echHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhccccCC-Ccc
Q 007552 79 FSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEK 157 (599)
Q Consensus 79 ~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~-~~~ 157 (599)
++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++.||++++++++||+|||++|+..... .+.
T Consensus 114 ~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~ 193 (554)
T 1yuw_A 114 FYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAER 193 (554)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCE
T ss_pred EcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987653 467
Q ss_pred EEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHH
Q 007552 158 NILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRA 237 (599)
Q Consensus 158 ~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ 237 (599)
.+||||+||||||++++++.++.++++++.++.++||++||+.|++++.++|+++++.++..+++++.+|+.+||++|+.
T Consensus 194 ~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ 273 (554)
T 1yuw_A 194 NVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 273 (554)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhh
Confidence 89999999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred ccCCcceEEEEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhH
Q 007552 238 LSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDY 317 (599)
Q Consensus 238 Ls~~~~~~i~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~ 317 (599)
||....+.+.++.+.+|.++...|+|++|++++.|+++++..+|+++|+++++.+.+|+.|+||||+|++|+|++.|++.
T Consensus 274 ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~ 353 (554)
T 1yuw_A 274 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDF 353 (554)
T ss_dssp HTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHH
T ss_pred cccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHH
Confidence 99999999999988888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCchhhhchHHHhhhhhcCCCCCCCcceEEeeecccccceEeeCCeeEEEEeCCCCCCCcceeeeeeccC
Q 007552 318 FDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQD 397 (599)
Q Consensus 318 f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~~~~~~~~~~d 397 (599)
|++.++..+.||++|||+|||++|+.+++...++.+++.+.|++|++||+++.+|.|.++|++|+++|++++.+|++..|
T Consensus 354 f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d 433 (554)
T 1yuw_A 354 FNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSD 433 (554)
T ss_dssp TTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESST
T ss_pred cCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEEEEEecCceEEEEEECCCccCceeEEEeeeccC
Confidence 97788888999999999999999999988533456789999999999999999999999999999999999999999999
Q ss_pred CceeEEEEEEecCCcccccCccceeEEecCCCCCCCCCCeEEEEEEEcCCceEEEEEeecCCCceeEEEEecCCCCCCHH
Q 007552 398 QQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQE 477 (599)
Q Consensus 398 ~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ 477 (599)
+|+.+.|.+|||++....+|..||+|.|.++||.|.|.++|+|+|.+|.||+|+|++.+..+|+..+++|+++..+||++
T Consensus 434 ~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~ 513 (554)
T 1yuw_A 434 NQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 513 (554)
T ss_dssp TCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHH
T ss_pred CCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887789999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHhhccHHHHHHHHHHHh
Q 007552 478 EIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQI 517 (599)
Q Consensus 478 ~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~i~~~~~~l 517 (599)
++++++++++++..+|+..+++.+++|+||+|+|.+|+.|
T Consensus 514 ~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 514 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp HHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999988765
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1.7e-75 Score=641.62 Aligned_cols=471 Identities=56% Similarity=0.876 Sum_probs=422.4
Q ss_pred ccccCceEEecCCCcccccccchhhccCCCCChHHHHhhccC---CcEEEecCCceEEEEEEeCCceeEechHHHHHHHH
Q 007552 13 FFKCLFICVDFSPLKKKGGWRLIEFVFARFEDKEVQRDMKLA---PYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMIL 89 (599)
Q Consensus 13 ~~r~~p~~v~~~~~~~~~~~~~k~llG~~~~d~~~~~~~~~~---~~~~v~~~g~~~~~v~~~~g~~~~~s~e~v~a~~L 89 (599)
=.|.||++|+|.+..+..|+..++...... . .-...|++ ||+ +.. +| +.++|+++++++|
T Consensus 32 g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~--~~~~~Kr~lg~p~~-----------~~~-~g--~~~~~~ei~a~~L 94 (509)
T 2v7y_A 32 GNRTTPSVVAFKNGERLVGEVAKRQAITNP-N--TIISIKRHMGTDYK-----------VEI-EG--KQYTPQEISAIIL 94 (509)
T ss_dssp SCSSEECEEEESSSSEEESHHHHTTTTTCS-S--EEECGGGTTTSCCC-----------EEE-TT--EEECHHHHHHHHH
T ss_pred CCcccceEEEECCCcEEECHHHHHhHHhCC-C--cHHHHHHhcCCCcE-----------EEE-CC--EEEcHHHHHHHHH
Confidence 358899999997666666654443332211 0 00111211 333 233 66 5789999999999
Q ss_pred HHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhccccCCCccEEEEEEcCCCEE
Q 007552 90 TKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTF 169 (599)
Q Consensus 90 ~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlVvD~Gggt~ 169 (599)
++|++.|+.+++.++.++|||||++|++.||+++++|++.||++++++++||+|||++|+.... .+.++||||+|||||
T Consensus 95 ~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~AGl~~~~li~Ep~AAAlay~~~~~-~~~~vlV~D~GgGT~ 173 (509)
T 2v7y_A 95 QYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKE-EDQTILVYDLGGGTF 173 (509)
T ss_dssp HHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTGGGS-CSEEEEEEEECSSCE
T ss_pred HHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHHHhhccC-CCCEEEEEECCCCeE
Confidence 9999999999999999999999999999999999999999999999999999999999998765 578999999999999
Q ss_pred EEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHccCCcceEEEEe
Q 007552 170 DVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIE 249 (599)
Q Consensus 170 dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~ 249 (599)
|++++++.++.++++++.++..+||.+||+.|++++.++|+++++.++..+++.+.+|+.+||++|+.||......+.++
T Consensus 174 Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~ 253 (509)
T 2v7y_A 174 DVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLP 253 (509)
T ss_dssp EEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred EEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999988888888
Q ss_pred cccC---C-ccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCC
Q 007552 250 SLFD---G-IDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNK 325 (599)
Q Consensus 250 ~l~~---~-~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~ 325 (599)
.+.+ | .++.++|||++|+++++|+++++..+|+++|+++++.+.+|+.|+|+||+|++|+|++.|++.| +.++..
T Consensus 254 ~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~ 332 (509)
T 2v7y_A 254 FISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHK 332 (509)
T ss_dssp EEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBC
T ss_pred ccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCc
Confidence 6654 2 4577899999999999999999999999999999999899999999999999999999999999 677888
Q ss_pred CCCCchhhhchHHHhhhhhcCCCCCCCcceEEeeecccccceEeeCCeeEEEEeCCCCCCCcceeeeeeccCCceeEEEE
Q 007552 326 GVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQ 405 (599)
Q Consensus 326 ~~~p~~aVA~GAa~~a~~ls~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~~~~~~~~~~d~q~~~~i~ 405 (599)
+.||++|||+|||++|+.+++. .+++.+.|++|++||+++.+|.|.++|++|+++|++++.+|++..|+|+.+.|.
T Consensus 333 ~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p~slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~ 408 (509)
T 2v7y_A 333 GVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIH 408 (509)
T ss_dssp CSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBCSSEEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEE
T ss_pred CCCchhhhHhhHHHHHHHhcCC----ccCceEEEeeccccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEE
Confidence 9999999999999999999876 467889999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcccccCccceeEEecCCCCCCCCCCeEEEEEEEcCCceEEEEEeecCCCceeEEEEecCCCCCCHHHHHHHHHH
Q 007552 406 VFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVRE 485 (599)
Q Consensus 406 i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~~i~~~~~~ 485 (599)
+|+|++..+.+|..||+|.|.++||.|.|.++|+++|++|.||+|+|++.+..+|+..+++|+++ ..||++++++++++
T Consensus 409 v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~ 487 (509)
T 2v7y_A 409 VLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKE 487 (509)
T ss_dssp EEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHH
T ss_pred EEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988 78999999999999
Q ss_pred HHHHHHhhhhHHHHHHhhccHH
Q 007552 486 AEEFAEEDKKVKEKIDARNSLE 507 (599)
Q Consensus 486 ~~~~~~~D~~~~~~~~a~N~LE 507 (599)
+++|..+|+..+++.+++|+||
T Consensus 488 ~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 488 AEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp HHHSCGGGGGGGGCCCC-----
T ss_pred HHHhhhccHHHHHHHHHHhhcC
Confidence 9999999999999999999987
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=9.6e-56 Score=472.63 Aligned_cols=333 Identities=64% Similarity=0.962 Sum_probs=315.4
Q ss_pred ccccCceEEecCCCcccccc---------------cchhhccCCCCChHHHHhhccCCcEEEecCCceEEEEEEeCCcee
Q 007552 13 FFKCLFICVDFSPLKKKGGW---------------RLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETK 77 (599)
Q Consensus 13 ~~r~~p~~v~~~~~~~~~~~---------------~~k~llG~~~~d~~~~~~~~~~~~~~v~~~g~~~~~v~~~~g~~~ 77 (599)
-.|.||++|+|.+..+..|+ .+||+||++++|+.++.+.+.|||.+++.+|.+.+.+.+ +|+..
T Consensus 53 g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~~~~~~~~p~~~~~~~g~~~~~v~~-~~~~~ 131 (404)
T 3i33_A 53 GNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEY-KGETK 131 (404)
T ss_dssp SCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHHHHHHTTCSSEEEEETTEEEEEEEE-TTEEE
T ss_pred CCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHHHHHHhhCCceEEccCCceEEEEEe-CCCce
Confidence 35899999999887766654 789999999999999999999999999989999999998 88888
Q ss_pred EechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhccccCC---
Q 007552 78 VFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG--- 154 (599)
Q Consensus 78 ~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~--- 154 (599)
.++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|+.....
T Consensus 132 ~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~ 211 (404)
T 3i33_A 132 TFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAG 211 (404)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSS
T ss_pred EEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887652
Q ss_pred CccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Q 007552 155 GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERA 234 (599)
Q Consensus 155 ~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 234 (599)
.+..++|||+||||||++++++.++.++++++.++..+||.+||+.|++++.++|+++++.++..+++.+.+|+.+||++
T Consensus 212 ~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~ 291 (404)
T 3i33_A 212 GEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERA 291 (404)
T ss_dssp SCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred HHHccCCcceEEEEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHH
Q 007552 235 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLL 314 (599)
Q Consensus 235 K~~Ls~~~~~~i~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l 314 (599)
|+.||......+.++.+.++.++.+.|+|++|+++++|+++++.++|.++|+.+++...+|+.|+|+||+|++|+|++.|
T Consensus 292 K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l 371 (404)
T 3i33_A 292 KRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLL 371 (404)
T ss_dssp HHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHH
T ss_pred HHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHH
Confidence 99999999999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHcCCCCCCCCCCCchhhhchHHHhhhhhcC
Q 007552 315 KDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 346 (599)
Q Consensus 315 ~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~ 346 (599)
++.|++.++..+.||++|||+|||++|+.+++
T Consensus 372 ~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 372 QDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99998888989999999999999999999875
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=6.2e-55 Score=464.76 Aligned_cols=335 Identities=63% Similarity=0.980 Sum_probs=316.9
Q ss_pred hhcccccCceEEecCCCcccccc---------------cchhhccCCCCChHHHHhhccCCcEEEecCCceEEEEEEeCC
Q 007552 10 NASFFKCLFICVDFSPLKKKGGW---------------RLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDG 74 (599)
Q Consensus 10 ~~~~~r~~p~~v~~~~~~~~~~~---------------~~k~llG~~~~d~~~~~~~~~~~~~~v~~~g~~~~~v~~~~g 74 (599)
|..-.|.||++|+|.+..+..|+ .+||+||++++++.++...+.|||.+++.+|.+.+.+.+ +|
T Consensus 45 ~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 123 (394)
T 3qfu_A 45 NEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSV-KG 123 (394)
T ss_dssp CTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHHHHHTTCSSEEEEETTEEEEEEES-SS
T ss_pred CCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHHHHhhcCCeEEEcCCCceEEEEEe-CC
Confidence 33445789999999887766664 689999999999999999999999999989999999988 88
Q ss_pred ceeEechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhccccCC
Q 007552 75 ETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG 154 (599)
Q Consensus 75 ~~~~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~ 154 (599)
+.+.++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|+.....
T Consensus 124 ~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~ 203 (394)
T 3qfu_A 124 EKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSD 203 (394)
T ss_dssp SEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSCS
T ss_pred CceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999887766
Q ss_pred CccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Q 007552 155 GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERA 234 (599)
Q Consensus 155 ~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 234 (599)
.+..++|||+||||||++++++.++.++++++.++..+||.+||+.|++++.++|+++++.++..+++.+.+|+.+||++
T Consensus 204 ~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~ 283 (394)
T 3qfu_A 204 KEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKA 283 (394)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHccCCcceEEEEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHH
Q 007552 235 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLL 314 (599)
Q Consensus 235 K~~Ls~~~~~~i~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l 314 (599)
|+.||......+.++.+.++.++.+.++|++|+++++++++++..+|.++|+.+++...+|+.|+|+||+|++|+|++.|
T Consensus 284 K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l 363 (394)
T 3qfu_A 284 KRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLL 363 (394)
T ss_dssp HHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHH
T ss_pred HHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHH
Confidence 99999999999999988889999999999999999999999999999999999999989999999999999999999999
Q ss_pred HhHcCCCCCCCCCCCchhhhchHHHhhhhhc
Q 007552 315 KDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 345 (599)
Q Consensus 315 ~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls 345 (599)
++.|++.++..+.||++|||.|||++|+.++
T Consensus 364 ~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 364 ESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999888898999999999999999998764
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=4.6e-53 Score=452.58 Aligned_cols=333 Identities=28% Similarity=0.444 Sum_probs=300.8
Q ss_pred cccccCceEEecCCCcccccc---------------cchhhccCCCCChHHHHhhccCCcEEEecCCceEEEEEEeC---
Q 007552 12 SFFKCLFICVDFSPLKKKGGW---------------RLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRD--- 73 (599)
Q Consensus 12 ~~~r~~p~~v~~~~~~~~~~~---------------~~k~llG~~~~d~~~~~~~~~~~~~~v~~~g~~~~~v~~~~--- 73 (599)
.=.|.+|++|+|.+..+..|+ ++||+||++++++.++.. .+++.+++.+|.+.+.+.. .
T Consensus 42 ~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~~~~--~~~~~~~~~~g~~~~~v~~-~~~~ 118 (409)
T 4gni_A 42 DGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDPTHN--HASAHPQEAGDNVVFTIKD-KAEE 118 (409)
T ss_dssp TSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCCGGG--TTSCCCEEETTEEEEEECC-SSCS
T ss_pred CCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhhhhh--ccccceecCCCcEEEEEec-CCCC
Confidence 345899999999887776654 679999999998766543 4566667778888888765 3
Q ss_pred -CceeEechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhcccc
Q 007552 74 -GETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDK 152 (599)
Q Consensus 74 -g~~~~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~ 152 (599)
++.+.++|+++++++|++|+++++.+++.++.++|||||++|++.||++|++|++.||++++.+++||+|||++|+...
T Consensus 119 ~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~ 198 (409)
T 4gni_A 119 DAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARP 198 (409)
T ss_dssp SCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC--
T ss_pred CCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhccc
Confidence 4668999999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred --CCCccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcC--CCCccCHHHHHHHH
Q 007552 153 --KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG--KDISKDKRAIGKLR 228 (599)
Q Consensus 153 --~~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~--~~~~~~~~~~~~L~ 228 (599)
...+..++|||+||||||++++++.++.++++++.++..+||.+||+.|++++.++|..+++ .++..+++.+.+|+
T Consensus 199 ~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (409)
T 4gni_A 199 EATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLR 278 (409)
T ss_dssp ----CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHH
T ss_pred ccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHH
Confidence 23678999999999999999999999999999999999999999999999999999999998 88888999999999
Q ss_pred HHHHHHHHHccCCcceEEEEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcH
Q 007552 229 REAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIP 308 (599)
Q Consensus 229 ~~~e~~K~~Ls~~~~~~i~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip 308 (599)
.+||++|+.||......+.++.+.++.++.+.|||++|+++++|+++++..+|+++|+++++...+|+.|+|+||+|++|
T Consensus 279 ~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p 358 (409)
T 4gni_A 279 LEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTP 358 (409)
T ss_dssp HHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCH
T ss_pred HHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHcCCC-CC------CCCCCCchhhhchHHHhhhhhcCC
Q 007552 309 KVQQLLKDYFDGK-EP------NKGVNPDEAVAYGAAVQGGILSGE 347 (599)
Q Consensus 309 ~v~~~l~~~f~~~-~i------~~~~~p~~aVA~GAa~~a~~ls~~ 347 (599)
+|++.|++.|+.. ++ ....||++|||+|||++|+.....
T Consensus 359 ~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 359 RIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 9999999999543 34 678999999999999999976543
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=2.9e-51 Score=434.81 Aligned_cols=326 Identities=51% Similarity=0.841 Sum_probs=292.8
Q ss_pred cccCceEEecCCC-ccccc---------------ccchhhccCCCCChHHHHhhccCCcEEEe-cCCceEEEEEEeCCce
Q 007552 14 FKCLFICVDFSPL-KKKGG---------------WRLIEFVFARFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGET 76 (599)
Q Consensus 14 ~r~~p~~v~~~~~-~~~~~---------------~~~k~llG~~~~d~~~~~~~~~~~~~~v~-~~g~~~~~v~~~~g~~ 76 (599)
.|.+|++|+|..+ .+..| +++||+||+.++++.++...+.+||.++. .+|.+.+.+ +|
T Consensus 33 ~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~g-- 107 (383)
T 1dkg_D 33 DRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV---KG-- 107 (383)
T ss_dssp CSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHHHHHTTTCSSEEEECSSSBEEEEE---TT--
T ss_pred CcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEE---CC--
Confidence 5889999999643 33333 36899999999999999888999999874 677766554 66
Q ss_pred eEechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhccccCCCc
Q 007552 77 KVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGE 156 (599)
Q Consensus 77 ~~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~ 156 (599)
+.++|+++++++|+++++.|+.+++.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|+......+
T Consensus 108 ~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~ 187 (383)
T 1dkg_D 108 QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGN 187 (383)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHHHTCCC-CCE
T ss_pred EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHHHhccCCCC
Confidence 58999999999999999999999998899999999999999999999999999999999999999999999987654357
Q ss_pred cEEEEEEcCCCEEEEEEEEEe----CCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Q 007552 157 KNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAE 232 (599)
Q Consensus 157 ~~vlVvD~Gggt~dvsv~~~~----~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e 232 (599)
..+||||+||||||+++++.. ++.++++++.++..+||++||+.|++++.++|+.+++.++..+++.+.+|+..||
T Consensus 188 ~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae 267 (383)
T 1dkg_D 188 RTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAE 267 (383)
T ss_dssp EEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHH
T ss_pred cEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHH
Confidence 799999999999999999998 6788999888889999999999999999999999999888888999999999999
Q ss_pred HHHHHccCCcceEEEEecccC---C-ccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcH
Q 007552 233 RAKRALSSQHQVRVEIESLFD---G-IDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIP 308 (599)
Q Consensus 233 ~~K~~Ls~~~~~~i~i~~l~~---~-~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip 308 (599)
++|+.||......+.++.+.+ | .++.+.|+|++|+++++|+++++.++|+++|+++++.+.+++.|+|+||+|++|
T Consensus 268 ~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p 347 (383)
T 1dkg_D 268 KAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMP 347 (383)
T ss_dssp HHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSH
T ss_pred HHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccH
Confidence 999999998888888876543 2 456779999999999999999999999999999998888999999999999999
Q ss_pred HHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhc
Q 007552 309 KVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 345 (599)
Q Consensus 309 ~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls 345 (599)
+|++.|++.| +.++..+.||++|||+|||++|+.++
T Consensus 348 ~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 348 MVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999999 67788889999999999999998764
No 10
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=6.6e-38 Score=302.48 Aligned_cols=215 Identities=48% Similarity=0.760 Sum_probs=206.3
Q ss_pred EEeeecccccceEeeCCeeEEEEeCCCCCCCcceeeeeeccCCceeEEEEEEecCCcccccCccceeEEecCCCCCCCCC
Q 007552 356 LLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGT 435 (599)
Q Consensus 356 ~~~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~ 435 (599)
++.|++|+|+|+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||.|.|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEEcCCceEEEEEeecCCCceeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhccHHHHHHHHHH
Q 007552 436 PQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKN 515 (599)
Q Consensus 436 ~~i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~i~~~~~ 515 (599)
++|+|+|++|.||+|+|++.+..||+...++|++. ..||++++++++++++++..+|+..+++.+++|.||+|+|.+++
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~ 160 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK 160 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999886 67999999999999999999999999999999999999999999
Q ss_pred HhchhhhhhccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 007552 516 QINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 577 (599)
Q Consensus 516 ~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~~t~~~~~~kl~~L~~~~~~i~~r~~e 577 (599)
.|.+ +.++++++++++|...++++++||+++ +.++|++++++|++++.||..|+++
T Consensus 161 ~l~~---~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 161 QVEE---AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHH---HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHH---hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9986 778999999999999999999999987 7999999999999999999999876
No 11
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=1.6e-35 Score=288.73 Aligned_cols=215 Identities=35% Similarity=0.600 Sum_probs=205.1
Q ss_pred eeecccccceEeeCCeeEEEEeCCCCCCCcceeeeeeccCCceeEEEEEEecCCcccccCccceeEEecCCCCCCCCCCe
Q 007552 358 LDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQ 437 (599)
Q Consensus 358 ~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~ 437 (599)
.|++|+++|+++.+|.|.+|||+|++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||.|.|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCceEEEEEeecCCCceeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhccHHHHHHHHHHHh
Q 007552 438 IEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQI 517 (599)
Q Consensus 438 i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~i~~~~~~l 517 (599)
|+|+|.+|.||+|+|++.+..+|+...++|+.. ..||++++++++++++++..+|+..+++.+++|.||+|+|.+|+.|
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l 159 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL 159 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887 6699999999999999999999999999999999999999999999
Q ss_pred chhhhhhccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 007552 518 NDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRS 579 (599)
Q Consensus 518 ~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~~t~~~~~~kl~~L~~~~~~i~~r~~e~~ 579 (599)
.+ +..+++++++..+...++++++||+.+ +.++|++++++|++++.||..|++.++
T Consensus 160 ~~---~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 160 AA---DAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HH---HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh---hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 678899999999999999999999965 689999999999999999999887654
No 12
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=4.5e-36 Score=313.39 Aligned_cols=285 Identities=23% Similarity=0.311 Sum_probs=221.2
Q ss_pred CceEEecCCC--cc-cccccchhhccCCCCChHHHHhhccCCcEEEecCCceEEEEEEeCCceeEe-chHHHHHHHHHHH
Q 007552 17 LFICVDFSPL--KK-KGGWRLIEFVFARFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVF-SPEEISAMILTKM 92 (599)
Q Consensus 17 ~p~~v~~~~~--~~-~~~~~~k~llG~~~~d~~~~~~~~~~~~~~v~~~g~~~~~v~~~~g~~~~~-s~e~v~a~~L~~l 92 (599)
+|++|+|... ++ ..|...++++|+.+++..+ .+|++ +|....+ .++++++++|+++
T Consensus 28 ~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~-----~~p~~---------------~g~i~~~~~~~~i~~~~l~~~ 87 (344)
T 1jce_A 28 EPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA-----IRPMR---------------DGVIADYTVALVMLRYFINKA 87 (344)
T ss_dssp EESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE-----ECCEE---------------TTEESSHHHHHHHHHHHHHHH
T ss_pred eCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE-----EecCC---------------CCeeCChHHHHHHHHHHHHHH
Confidence 7999999765 22 5788888888887655221 22322 2311112 3566666666665
Q ss_pred HHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhccccCCCccEEEEEEcCCCEEEEE
Q 007552 93 KETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVS 172 (599)
Q Consensus 93 ~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlVvD~Gggt~dvs 172 (599)
+... .++ ...+|||||++|++.||+++++|++.||++++.+++||+|||++|+.... .+..++|||+||||||++
T Consensus 88 ~~~~--~~~--~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~-~~~~~lVvDiGggttdvs 162 (344)
T 1jce_A 88 KGGM--NLF--KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVE-EPSGNMVVDIGGGTTEVA 162 (344)
T ss_dssp HTSC--CSC--CCEEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHTTCCTT-SSSCEEEEEECSSCEEEE
T ss_pred hhcc--ccC--CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHHHHHhcCCCCC-CCceEEEEEeCCCeEEEE
Confidence 4421 233 37899999999999999999999999999999999999999999987654 467899999999999999
Q ss_pred EEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHccCCcc------eEE
Q 007552 173 ILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQ------VRV 246 (599)
Q Consensus 173 v~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------~~i 246 (599)
+++.... + ..++..+||.+||+.|.+++.+++ +.++. +..||++|+.|+.... ..+
T Consensus 163 v~~~~~~----~-~~~~~~lGG~~id~~l~~~l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~ 224 (344)
T 1jce_A 163 VISLGSI----V-TWESIRIAGDEMDEAIVQYVRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELET 224 (344)
T ss_dssp EEETTEE----E-EEEEESCSHHHHHHHHHHHHHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEE
T ss_pred EEEcCCE----E-eeCCCCccChhHHHHHHHHHHHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceE
Confidence 9986432 1 235678999999999999987665 32221 3689999999987642 244
Q ss_pred EEe--cccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--ccCC-CeEEEecCCCCcHHHHHHHHhHcCCC
Q 007552 247 EIE--SLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLE--KNQI-DEIVLVGGSTRIPKVQQLLKDYFDGK 321 (599)
Q Consensus 247 ~i~--~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~--~~~i-~~ViLvGG~srip~v~~~l~~~f~~~ 321 (599)
.++ .+.+|.+..++|+|++|+++++|.++++.+.|.++|++++.. ...+ +.|+|+||+|++|+|++.|++.| +.
T Consensus 225 ~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~ 303 (344)
T 1jce_A 225 TVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GI 303 (344)
T ss_dssp EEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SS
T ss_pred EEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CC
Confidence 443 445666778999999999999999999999999999986422 2234 68999999999999999999999 56
Q ss_pred CCCCCCCCchhhhchHHHhhhhhc
Q 007552 322 EPNKGVNPDEAVAYGAAVQGGILS 345 (599)
Q Consensus 322 ~i~~~~~p~~aVA~GAa~~a~~ls 345 (599)
++....||++|||+||+++|+.++
T Consensus 304 ~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 304 SVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp CEEECSSTTTHHHHHHHHGGGCHH
T ss_pred CccccCChHHHHHHHHHHHHhChH
Confidence 777788999999999999998654
No 13
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.97 E-value=5.2e-31 Score=245.89 Aligned_cols=165 Identities=55% Similarity=0.886 Sum_probs=154.4
Q ss_pred CcceEEeeecccccceEeeCCeeEEEEeCCCCCCCcceeeeeeccCCceeEEEEEEecCCcccccCccceeEEecCCCCC
Q 007552 352 TKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPA 431 (599)
Q Consensus 352 ~~~~~~~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~ 431 (599)
...+.+.|++|+++|+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||.
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEcCCceEEEEEeecCCCceeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhccHHHHHH
Q 007552 432 PRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVY 511 (599)
Q Consensus 432 ~~g~~~i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~i~ 511 (599)
|.|.++|+|+|++|.||+|+|++.+..+|+...++|++. ..|++++++++++++++|..+|+..+++.+++|.||+|+|
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy 175 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIH 175 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 007552 512 NMKNQI 517 (599)
Q Consensus 512 ~~~~~l 517 (599)
.+|+.|
T Consensus 176 ~~~~~l 181 (182)
T 3n8e_A 176 DTETKM 181 (182)
T ss_dssp CCSCCC
T ss_pred HHHHhh
Confidence 998765
No 14
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.96 E-value=1.2e-28 Score=224.07 Aligned_cols=151 Identities=72% Similarity=1.051 Sum_probs=146.5
Q ss_pred EeeecccccceEeeCCeeEEEEeCCCCCCCcceeeeeeccCCceeEEEEEEecCCcccccCccceeEEecCCCCCCCCCC
Q 007552 357 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTP 436 (599)
Q Consensus 357 ~~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~ 436 (599)
+.|++|+|+|+++.+|.|.++||||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|.|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCceEEEEEeecCCCceeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhccHH
Q 007552 437 QIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLE 507 (599)
Q Consensus 437 ~i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE 507 (599)
+|+|+|++|.||+|+|++.+..+|+...++|+++.+.|++++++++++++++|..+|+..+++.+++|.||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999987899999999999999999999999999999999986
No 15
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.96 E-value=9e-29 Score=224.60 Aligned_cols=151 Identities=68% Similarity=1.035 Sum_probs=142.2
Q ss_pred EeeecccccceEeeCCeeEEEEeCCCCCCCcceeeeeeccCCceeEEEEEEecCCcccccCccceeEEecCCCCCCCCCC
Q 007552 357 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTP 436 (599)
Q Consensus 357 ~~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~ 436 (599)
+.|++|+|+|+++.+|.|.++||||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|.|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCceEEEEEeecCCCceeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhccHH
Q 007552 437 QIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLE 507 (599)
Q Consensus 437 ~i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE 507 (599)
+|+|+|++|.||+|+|++.+..+|+...++|+++.+.||++++++++++++++..+|+..+++.+++|.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999987789999999999999999999999999999999986
No 16
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.96 E-value=1.6e-28 Score=222.78 Aligned_cols=150 Identities=59% Similarity=0.940 Sum_probs=144.7
Q ss_pred EeeecccccceEeeCCeeEEEEeCCCCCCCcceeeeeeccCCceeEEEEEEecCCcccccCccceeEEecCCCCCCCCCC
Q 007552 357 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTP 436 (599)
Q Consensus 357 ~~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~ 436 (599)
+.|++|+|+|+++.+|.|.++||||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|.|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCceEEEEEeecCCCceeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhccHH
Q 007552 437 QIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLE 507 (599)
Q Consensus 437 ~i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE 507 (599)
+|+|+|++|.||+|+|++.+..+|+...++|+++ ..|++++++++++++++|..+|+..+++.+++|.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988 899999999999999999999999999999999885
No 17
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.94 E-value=1.3e-26 Score=211.92 Aligned_cols=151 Identities=66% Similarity=1.023 Sum_probs=145.3
Q ss_pred EeeecccccceEeeCCeeEEEEeCCCCCCCcceeeeeeccCCceeEEEEEEecCCcccccCccceeEEecCCCCCCCCCC
Q 007552 357 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTP 436 (599)
Q Consensus 357 ~~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~ 436 (599)
+.|++|++||+++.+|.|.+||++|++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||.|.|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCceEEEEEeecCCCceeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhccHH
Q 007552 437 QIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLE 507 (599)
Q Consensus 437 ~i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE 507 (599)
+|+|+|++|.||+|+|++.+..+|+...++|+...+.|++++++++++++++|..+|+..+++.++||.||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999876789999999999999999999999999999999986
No 18
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.92 E-value=2e-24 Score=217.50 Aligned_cols=203 Identities=23% Similarity=0.348 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHHHHHHhccccCCCccEEEE
Q 007552 82 EEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILV 161 (599)
Q Consensus 82 e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlV 161 (599)
.+....+|+++++.++.+.+..+..+++|+|++|+..+|+.++.+++.+|+++..++.||+|++++|+.. ..+|
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~------~~~v 143 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN------DGIV 143 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS------SEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC------CEEE
Confidence 4677899999999999988888899999999999999999999999999999999999999999998753 2599
Q ss_pred EEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHccCC
Q 007552 162 FDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQ 241 (599)
Q Consensus 162 vD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~ 241 (599)
+|+|||||+++++. ++.+. ......+||.+||+.+.+++. .+ ...++++|+.++
T Consensus 144 iDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~~-- 197 (272)
T 3h1q_A 144 VDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDFS-- 197 (272)
T ss_dssp EEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSST--
T ss_pred EEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhcC--
Confidence 99999999999986 44332 345689999999999988753 11 257888998875
Q ss_pred cceEEEEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCC
Q 007552 242 HQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGK 321 (599)
Q Consensus 242 ~~~~i~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~ 321 (599)
++.++++++.+.++++...+.+.++..+ .++.|+|+||++++|++++.+++.| +.
T Consensus 198 --------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l-~~ 252 (272)
T 3h1q_A 198 --------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL-GK 252 (272)
T ss_dssp --------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH-SS
T ss_pred --------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh-CC
Confidence 6889999999999999999999988643 4789999999999999999999999 77
Q ss_pred CCCCCCCCchhhhchHHHhh
Q 007552 322 EPNKGVNPDEAVAYGAAVQG 341 (599)
Q Consensus 322 ~i~~~~~p~~aVA~GAa~~a 341 (599)
++..+.+|++++|+|||++|
T Consensus 253 ~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 253 EVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp CCBCCSSGGGHHHHHHHTTC
T ss_pred CccccCChHHHHHHHHHhcC
Confidence 88888999999999999875
No 19
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.91 E-value=1.1e-24 Score=226.91 Aligned_cols=228 Identities=16% Similarity=0.127 Sum_probs=170.7
Q ss_pred EechHHHHHHHHHHHHHHHHHHhCCCcccEE--EEeCCCCCHHHHHHHHHHHHHc--------C------Cceeecccch
Q 007552 78 VFSPEEISAMILTKMKETAEAFLGKKIKDAV--VTVPAYFNDAQRQATKDAGIIA--------G------LNVARIINEP 141 (599)
Q Consensus 78 ~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~V--itVPa~~~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep 141 (599)
.++++...++++..|++.++...+.+ .++| |+||++|+..||+++++|+..+ | +..+.+++||
T Consensus 94 ~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep 172 (346)
T 2fsj_A 94 RLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQG 172 (346)
T ss_dssp CTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETT
T ss_pred cccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccH
Confidence 45668888888888887653222333 5799 9999999999999999997765 4 3558899999
Q ss_pred HHHHHHhcccc--CCCccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCC--CC
Q 007552 142 TAAAIAYGLDK--KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGK--DI 217 (599)
Q Consensus 142 ~Aaal~y~~~~--~~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~--~~ 217 (599)
+|||++|.... .....+++|||+||||||++++++.++. .+.+..++..+||.+|++.|.+++ +++|+. ++
T Consensus 173 ~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i----~~~~g~~~~i 247 (346)
T 2fsj_A 173 VGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKI----AKETGFVVPF 247 (346)
T ss_dssp HHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHH----HHHHCCCCCH
T ss_pred HHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHH----HHHhCCCcCC
Confidence 99999882111 1234789999999999999999987776 555556778999999999998775 445555 32
Q ss_pred ccCHHHHHHHHHHHHHHHHHccCCcceEEEEecccCCccceeecCHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCccCCC
Q 007552 218 SKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARF-EELNNDLFRKTMGPVKKAMEDAGLEKNQID 296 (599)
Q Consensus 218 ~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~l~~~~~~~~~itr~~f-e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 296 (599)
.. +.+| . ...+.+ .+. .++++++ +++++++++++.+.|++.|+++ ...++
T Consensus 248 ~~---------~~~e-------~--~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~ 298 (346)
T 2fsj_A 248 DL---------AQEA-------L--SHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVT 298 (346)
T ss_dssp HH---------HHHH-------T--TSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEE
T ss_pred CH---------HHHh-------c--CCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhccc
Confidence 21 1222 1 112222 222 3558999 9999999999999999999875 45789
Q ss_pred eEEEecCCCCcHHHHHHHHhHcCCCCC-CCCCCCchhhhchHHHhhh
Q 007552 297 EIVLVGGSTRIPKVQQLLKDYFDGKEP-NKGVNPDEAVAYGAAVQGG 342 (599)
Q Consensus 297 ~ViLvGG~srip~v~~~l~~~f~~~~i-~~~~~p~~aVA~GAa~~a~ 342 (599)
.|+|+||+|++ +++.+++.|+...+ ....||++|+|.|+..++.
T Consensus 299 ~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 299 SLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred EEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 99999999999 99999999953332 2267999999999998764
No 20
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.89 E-value=1.7e-22 Score=214.94 Aligned_cols=240 Identities=15% Similarity=0.168 Sum_probs=188.4
Q ss_pred CCceeEechHHHHHHHHHHHHHHHHHHhCCCccc-EEEEeCCC------------CCH----------------------
Q 007552 73 DGETKVFSPEEISAMILTKMKETAEAFLGKKIKD-AVVTVPAY------------FND---------------------- 117 (599)
Q Consensus 73 ~g~~~~~s~e~v~a~~L~~l~~~a~~~~~~~~~~-~VitVPa~------------~~~---------------------- 117 (599)
+| .....+.+ +..++.+++.++...|.++++ +++++|.. .+.
T Consensus 47 ~G--~I~di~~~-~~~I~~av~~ae~~~g~~i~~~v~v~i~g~~~~i~s~~~~~~i~~~~~~i~~~di~~~i~~a~~~~~ 123 (419)
T 4a2a_A 47 EG--EIKDAIAF-KESVNTLLKELEEQLQKSLRSDFVISFSSVSFEREDTVIERDFGEEKRSITLDILSEMQSEALEKLK 123 (419)
T ss_dssp TT--EESBHHHH-HHHHHHHHHHHHHHHTSCCCSEEEEEECCTTCEEEEEEEEEECCSSCEECCHHHHHHHHHHHHHHHS
T ss_pred CC--EEEcHHHH-HHHHHHHHHHHHHHcCCCcCceEEEEEcCCcCeEEEEEeEEEEeCCCCEECHHHHHHHHHHhhhhcC
Confidence 66 44555555 788999999999999999999 99999998 210
Q ss_pred --------------------------------------------HHHHHHHHHHHHcCCceeecccchHHHHHHhccccC
Q 007552 118 --------------------------------------------AQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK 153 (599)
Q Consensus 118 --------------------------------------------~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~ 153 (599)
...+.+.+|++.|||++..++.||.|||++|.....
T Consensus 124 p~d~~~l~~~p~~f~vDg~~~i~~P~Gm~g~~l~~~v~~v~~~~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~ 203 (419)
T 4a2a_A 124 ENGKTPLHIFSKRYLLDDERIVFNPLDMKASKIAIEYTSIVVPLKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE 203 (419)
T ss_dssp CTTEEEEEEEEEEEEETTTEEESCCTTCEESEEEEEEEEEEEEHHHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH
T ss_pred CCCCEEEEEEeeEEEECCccCcCCCCCCcccEEEEEEEEEEEeHHHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc
Confidence 123578899999999999999999999998864332
Q ss_pred CCccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Q 007552 154 GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAER 233 (599)
Q Consensus 154 ~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 233 (599)
++..++|||+||||||+++++ ++.+.. .++..+||++||+.|...+ +. ....||+
T Consensus 204 -~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~GG~~it~dIa~~l--------~~-----------~~~~AE~ 258 (419)
T 4a2a_A 204 -KDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVGMKHVIKDVSAVL--------DT-----------SFEESER 258 (419)
T ss_dssp -HHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCCHHHHHHHHHHHH--------TC-----------CHHHHHH
T ss_pred -ccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccHHHHHHHHHHHHH--------CC-----------CHHHHHH
Confidence 356799999999999999987 554432 3457899999999998653 12 1378999
Q ss_pred HHHHccCC-----cceEEEEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CccCCCeEEEec
Q 007552 234 AKRALSSQ-----HQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGL------EKNQIDEIVLVG 302 (599)
Q Consensus 234 ~K~~Ls~~-----~~~~i~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~------~~~~i~~ViLvG 302 (599)
+|+.++.. ....+.++... ......++|++|.++++|.++++.+.|++.|+.++. ....++.|+|+|
T Consensus 259 iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtG 336 (419)
T 4a2a_A 259 LIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTG 336 (419)
T ss_dssp HHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEES
T ss_pred HHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEEC
Confidence 99998752 34567777543 345678999999999999999999999999999987 345689999999
Q ss_pred CCCCcHHHHHHHHhHcCCCCCC--C---------------CCCCchhhhchHHHhhhh
Q 007552 303 GSTRIPKVQQLLKDYFDGKEPN--K---------------GVNPDEAVAYGAAVQGGI 343 (599)
Q Consensus 303 G~srip~v~~~l~~~f~~~~i~--~---------------~~~p~~aVA~GAa~~a~~ 343 (599)
|+|++|.|++.+++.| +.++. . ..+|..+.|.|.++++..
T Consensus 337 G~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 337 GGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp GGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC---
T ss_pred chhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCcccccCCchHHHHHHHHHHHhh
Confidence 9999999999999999 44432 1 137899999999998854
No 21
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.87 E-value=1.8e-22 Score=213.03 Aligned_cols=217 Identities=18% Similarity=0.190 Sum_probs=152.3
Q ss_pred eEechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHH--------------------HHHHHHHHHHcCCceee
Q 007552 77 KVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQ--------------------RQATKDAGIIAGLNVAR 136 (599)
Q Consensus 77 ~~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~q--------------------r~~l~~Aa~~AGl~~~~ 136 (599)
..++++++... ++..++.+++.++.++||.+|. .+.+ .+.+++|++.||+++..
T Consensus 96 ~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~ 169 (377)
T 2ych_A 96 PKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVV 169 (377)
T ss_dssp ECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEEEEEEEEEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcceeEEEEEEecHHHHHHHHHHHHHCCCceEE
Confidence 35788887653 3446777888899999999983 2222 38899999999999999
Q ss_pred cccchHHHHHHhccccC-CCccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCC
Q 007552 137 IINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGK 215 (599)
Q Consensus 137 li~Ep~Aaal~y~~~~~-~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~ 215 (599)
++.||+|||++|+.... ..+..++|+|+||||||+++++ .+.+. ..++..+||.+||+.|.+. ++.
T Consensus 170 i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~--~g~~~---~~~~~~~GG~~i~~~i~~~--------~~~ 236 (377)
T 2ych_A 170 LDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLR--GDKPL---AVRVLTLSGKDFTEAIARS--------FNL 236 (377)
T ss_dssp EEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEE--TTEEE---EEEEESCSHHHHHHHHHHH--------TTC
T ss_pred EecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEE--CCEEE---EEEeeechHHHHHHHHHHH--------hCC
Confidence 99999999999865432 2456799999999999999997 34332 2355789999999998863 333
Q ss_pred CCccCHHHHHHHHHHHHHHHHHccCCcceEEEEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCcc
Q 007552 216 DISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDA--GLEKN 293 (599)
Q Consensus 216 ~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~--~~~~~ 293 (599)
+ +..||++|+.++.........+...+-......++|++|++++++.++++...|++.|+.. +....
T Consensus 237 ~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~ 305 (377)
T 2ych_A 237 D-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEA 305 (377)
T ss_dssp C-----------HHHHHHHHHHTC-------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred C-----------HHHHHHHHhhcccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 2 3689999999886432111100001111234578999999999999999999999999963 55667
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcCCCCCC
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPN 324 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~~~~i~ 324 (599)
.++.|+|+||+|++|.+++.+++.| +.++.
T Consensus 306 ~~~~IvL~GG~s~~p~l~~~l~~~l-~~~v~ 335 (377)
T 2ych_A 306 SPEVGYLLGGGSKLRGLASLLTDTL-GVNLE 335 (377)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHH-TSEEE
T ss_pred CcCEEEEECccccchhHHHHHHHHh-CCCeE
Confidence 8999999999999999999999999 45443
No 22
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.85 E-value=3.1e-21 Score=171.69 Aligned_cols=119 Identities=58% Similarity=0.944 Sum_probs=109.4
Q ss_pred CcceEEeeecccccceEeeCCeeEEEEeCCCCCCCcceeeeeeccCCceeEEEEEEecCCcccccCccceeEEecCCCCC
Q 007552 352 TKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPA 431 (599)
Q Consensus 352 ~~~~~~~d~~~~s~gi~~~~~~~~~ii~~g~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~ 431 (599)
.+++.+.|++|+++|+++.+|.|.++|+||+++|++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEcCCceEEEEEeecCCCceeEEEEecC
Q 007552 432 PRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITND 470 (599)
Q Consensus 432 ~~g~~~i~v~f~~d~~g~l~v~~~~~~~~~~~~~~i~~~ 470 (599)
|+|.++|+|+|++|.||+|+|++.+..+|+..+++|+++
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 999999999999999999999999999999999999876
No 23
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.85 E-value=3.1e-21 Score=206.34 Aligned_cols=227 Identities=17% Similarity=0.113 Sum_probs=165.1
Q ss_pred cccEEEEeCCCCCHHHHHHHHHHH-HHcCCceeecccchHHHHHH-hccccC-CCccEEEEEEcCCCEEEEEEEEEeCCe
Q 007552 104 IKDAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIA-YGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGV 180 (599)
Q Consensus 104 ~~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~-y~~~~~-~~~~~vlVvD~Gggt~dvsv~~~~~~~ 180 (599)
...+|||+|++|+..+|++|.+++ +.+|++.+.+++||+||+++ |..... ..+.+.+|||+|+||||++++. ++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~--~G~ 184 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA--EGY 184 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE--TTE
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE--CCE
Confidence 357999999999999999999999 88999999999999999987 421111 0122679999999999999985 443
Q ss_pred EEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHccCCc-----------------c
Q 007552 181 FEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQH-----------------Q 243 (599)
Q Consensus 181 ~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~-----------------~ 243 (599)
.+....+...+||++||+.|.+++.+++ +......+ ...+|++|+.++... .
T Consensus 185 -~~~~~~~~~~lGG~~lt~~l~~~l~~~~---~~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~ 253 (418)
T 1k8k_A 185 -VIGSCIKHIPIAGRDITYFIQQLLRDRE---VGIPPEQS-------LETAKAVKERYSYVCPDLVKEFNKYDTDGSKWI 253 (418)
T ss_dssp -ECGGGCEEESCSHHHHHHHHHHHHHTTC---CCCCGGGH-------HHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTC
T ss_pred -EcccceEEEeCcHHHHHHHHHHHHHhcC---CCCCCHHH-------HHHHHHHHHhhchhcccHHHHHHhhcccccccc
Confidence 2333335678999999999999876542 11211111 246777787765421 1
Q ss_pred eEEEEecccCCccceeecCHHHH---HHHHHHHH------HHHHHHHHHHHHHhC--CCccCCCeEEEecCCCCcHHHHH
Q 007552 244 VRVEIESLFDGIDFSEPLTRARF---EELNNDLF------RKTMGPVKKAMEDAG--LEKNQIDEIVLVGGSTRIPKVQQ 312 (599)
Q Consensus 244 ~~i~i~~l~~~~~~~~~itr~~f---e~~~~~~~------~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~srip~v~~ 312 (599)
..+.+++...+....+.+++++| |.++.|.+ ..+.+.|.++|..+. +....++.|+|+||+|++|.+++
T Consensus 254 ~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~ 333 (418)
T 1k8k_A 254 KQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGR 333 (418)
T ss_dssp EEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHH
T ss_pred eeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHH
Confidence 35666655555666889999999 55665542 568888999998764 34556788999999999999999
Q ss_pred HHHhHcCC-----------------------CCCCCCCCCchhhhchHHHhhhh
Q 007552 313 LLKDYFDG-----------------------KEPNKGVNPDEAVAYGAAVQGGI 343 (599)
Q Consensus 313 ~l~~~f~~-----------------------~~i~~~~~p~~aVA~GAa~~a~~ 343 (599)
+|++.+.. .++..+.+|..++..||+++|..
T Consensus 334 rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 334 RLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 99875521 12233457789999999999963
No 24
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.84 E-value=3.9e-21 Score=202.50 Aligned_cols=221 Identities=15% Similarity=0.161 Sum_probs=153.3
Q ss_pred ccEEEEeCCCCCHHHHHHHHHH-HHHcCCceeecccchHHHHHHhccccCCCccEEEEEEcCCCEEEEEEEEEeCCeEEE
Q 007552 105 KDAVVTVPAYFNDAQRQATKDA-GIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEV 183 (599)
Q Consensus 105 ~~~VitVPa~~~~~qr~~l~~A-a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v 183 (599)
..+|||+|++++..+|+++.++ .+.+|++.+.+++||+|||++|+. ...+|||+|+|||+++.+. ++. .+
T Consensus 101 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~------~~~lVvDiG~gtt~v~~v~--~G~-~~ 171 (375)
T 2fxu_A 101 HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVTHNVPIY--EGY-AL 171 (375)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC------SSEEEEEECSSCEEEEEEE--TTE-EC
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC------CeEEEEEcCCCceEEeEeE--CCE-Ee
Confidence 4599999999999999988776 488899999999999999999985 3679999999999998764 553 23
Q ss_pred EEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHH---------HHHHHHccCCcceEEEEecccCC
Q 007552 184 LSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREA---------ERAKRALSSQHQVRVEIESLFDG 254 (599)
Q Consensus 184 ~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------e~~K~~Ls~~~~~~i~i~~l~~~ 254 (599)
....+...+||+++|+.|.+++..+ .+............+|+..+ +..|..++......+.++ ++
T Consensus 172 ~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg 245 (375)
T 2fxu_A 172 PHAIMRLDLAGRDLTDYLMKILTER---GYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DG 245 (375)
T ss_dssp GGGCEEESCCHHHHHHHHHHHHHHH---TCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TS
T ss_pred ccceEEeccCHHHHHHHHHHHHHhc---CCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CC
Confidence 3334457899999999999998754 12221111122222222221 111222233233344433 22
Q ss_pred ccceeecCHHHH---HHHHHHH-----HHHHHHHHHHHHHHhC--CCccCCCeEEEecCCCCcHHHHHHHHhHcCC----
Q 007552 255 IDFSEPLTRARF---EELNNDL-----FRKTMGPVKKAMEDAG--LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDG---- 320 (599)
Q Consensus 255 ~~~~~~itr~~f---e~~~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~srip~v~~~l~~~f~~---- 320 (599)
..+.++++.| |.++.|. ...+.++|.++|.++. +....++.|+|+||+|++|.++++|++.+..
T Consensus 246 --~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~ 323 (375)
T 2fxu_A 246 --QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPS 323 (375)
T ss_dssp --CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCT
T ss_pred --CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCC
Confidence 2467888877 4445553 2457778888887642 2234567899999999999999999987731
Q ss_pred ---CCCCCCCCCchhhhchHHHhhh
Q 007552 321 ---KEPNKGVNPDEAVAYGAAVQGG 342 (599)
Q Consensus 321 ---~~i~~~~~p~~aVA~GAa~~a~ 342 (599)
.++..+.+|..+++.||+++|.
T Consensus 324 ~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 324 TMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp TCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred CeeEEEEcCCCCCccEEcchHHhhC
Confidence 3344567999999999999997
No 25
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.76 E-value=4.2e-19 Score=182.90 Aligned_cols=228 Identities=17% Similarity=0.186 Sum_probs=149.8
Q ss_pred eEechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceeeccc
Q 007552 77 KVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAY-FNDA--QR--QATKDA------------GIIAGLNVARIIN 139 (599)
Q Consensus 77 ~~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~-~~~~--qr--~~l~~A------------a~~AGl~~~~li~ 139 (599)
..+++..+++.+ ..|++ +.. .+.+ ..+|+++|.. |... || +++.+- ++.+++..+.+++
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 467777777654 44443 211 1223 3699999987 6531 21 212111 2344567788999
Q ss_pred chHHHHHHhccccCCCccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCcc
Q 007552 140 EPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISK 219 (599)
Q Consensus 140 Ep~Aaal~y~~~~~~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~ 219 (599)
||.||+++|... ..++..++|+|+||||||+++++ ++.+.+.+..++..+||.+||+.|.+++.+ + +.++.
T Consensus 148 e~~aa~~~~~~~-~~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~----~-~~~i~- 218 (320)
T 2zgy_A 148 ESIPAGYEVLQE-LDELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSL----A-RTKGS- 218 (320)
T ss_dssp SSHHHHHHHHHH-SCTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTC----C-SBGGG-
T ss_pred CcHHHHHhhhcc-ccCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHH----c-CCCCC-
Confidence 999999988633 22467899999999999999998 444455555677899999999999988653 2 33222
Q ss_pred CHHHHHHHHHHHHHH-HHHccCCcceEEEEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeE
Q 007552 220 DKRAIGKLRREAERA-KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 298 (599)
Q Consensus 220 ~~~~~~~L~~~~e~~-K~~Ls~~~~~~i~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V 298 (599)
. ..+|++ |.. . . . ......+...-+.+++.+++.+.++++.+.|.+.+++. .+++.|
T Consensus 219 -~-------~~ae~~lk~~-~-~-------~-~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~v 276 (320)
T 2zgy_A 219 -S-------YLADDIIIHR-K-D-------N-NYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHV 276 (320)
T ss_dssp -H-------HHHHHHHHTT-T-C-------H-HHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEE
T ss_pred -H-------HHHHHHHHHh-h-h-------h-hcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeE
Confidence 1 234444 322 0 0 0 00000000112345666777777777777777766542 568999
Q ss_pred EEecCCCCcHHHHHHHHhHcCCC--CCCCCCCCchhhhchHHHhh
Q 007552 299 VLVGGSTRIPKVQQLLKDYFDGK--EPNKGVNPDEAVAYGAAVQG 341 (599)
Q Consensus 299 iLvGG~srip~v~~~l~~~f~~~--~i~~~~~p~~aVA~GAa~~a 341 (599)
+|+||+|++ +++.|++.|+.. ++....||++|+|.||+++|
T Consensus 277 vl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 277 MVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp EEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred EEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 999999987 999999999532 46778899999999999876
No 26
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.59 E-value=2.9e-16 Score=166.18 Aligned_cols=214 Identities=17% Similarity=0.154 Sum_probs=89.5
Q ss_pred ccEEEEeCCCCCHHHHHHHHHHH-HHcCCceeecccchHHHHHHhccccCCCccEEEEEEcCCCEEEEEEEEEeCCeEEE
Q 007552 105 KDAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEV 183 (599)
Q Consensus 105 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v 183 (599)
..++||+|++++..+|+++.+++ +.+|++.+.+++||+|||++++. ...+|||+|+|||+++.+. ++.. +
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~------~~~lVVDiG~g~T~v~pv~--~G~~-~ 175 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL------LTGVVVDSGDGVTHICPVY--EGFS-L 175 (394)
T ss_dssp -------------------------------------------------------CCEEEECSSCEEEECEE--TTEE-C
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC------ceEEEEEcCCCceEeeeeE--CCEE-c
Confidence 35999999999999999988865 77899999999999999998875 3569999999999998775 3432 2
Q ss_pred EEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHccCCc----------------ceEEE
Q 007552 184 LSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQH----------------QVRVE 247 (599)
Q Consensus 184 ~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------------~~~i~ 247 (599)
........+||+++|+.|.+++..+ .+........ ..+|.+|+.+..-. ...+.
T Consensus 176 ~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~ 245 (394)
T 1k8k_B 176 PHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYT 245 (394)
T ss_dssp STTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred ccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCceEEE
Confidence 1112346899999999999987653 1222211222 34455555543211 12222
Q ss_pred EecccCCccceeecCHHHH---HHHHHHH-----HHHHHHHHHHHHHHhCC--CccCCCeEEEecCCCCcHHHHHHHHhH
Q 007552 248 IESLFDGIDFSEPLTRARF---EELNNDL-----FRKTMGPVKKAMEDAGL--EKNQIDEIVLVGGSTRIPKVQQLLKDY 317 (599)
Q Consensus 248 i~~l~~~~~~~~~itr~~f---e~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~srip~v~~~l~~~ 317 (599)
++ ++. .+.|+++.| |.++.|. ...|.+.|.++|.++.. ...-.+.|+|+||+|.+|.+.++|++.
T Consensus 246 lp---dg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~e 320 (394)
T 1k8k_B 246 LP---DGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERE 320 (394)
T ss_dssp CT---TSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHH
T ss_pred CC---CCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHH
Confidence 22 222 466777777 3344442 23567788888887632 233457899999999999999999887
Q ss_pred cCC------------------CCCCCCCCCchhhhchHHHhhh
Q 007552 318 FDG------------------KEPNKGVNPDEAVAYGAAVQGG 342 (599)
Q Consensus 318 f~~------------------~~i~~~~~p~~aVA~GAa~~a~ 342 (599)
+.. .++..+.+|..++..|++++|.
T Consensus 321 l~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 321 LKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 621 1223355778999999999986
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.58 E-value=8.4e-15 Score=147.42 Aligned_cols=230 Identities=16% Similarity=0.115 Sum_probs=148.4
Q ss_pred EecCCceEEEEEEeCCceeEechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecc
Q 007552 59 VNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARII 138 (599)
Q Consensus 59 v~~~g~~~~~v~~~~g~~~~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li 138 (599)
+++++.+...... +...|.++.+.+|+.+++.+. ....++.......+. ..++..+...|
T Consensus 18 ~d~~~~il~~~~~-----~~g~~~e~a~~vl~~~~~~a~----~~~~~~~~~a~t~~~-----------~~a~~~~~~~V 77 (276)
T 4ehu_A 18 LKNGEDIVASETI-----SSGTGTTGPSRVLEKLYGKTG----LAREDIKKVVVTGYG-----------RMNYSDADKQI 77 (276)
T ss_dssp EETTTEEEEEEEE-----SCCTTSSHHHHHHHHHHHHHC----CCGGGEEEEEEESTT-----------GGGCCSCSEEC
T ss_pred EECCCeEEEEEEe-----cCCCCHHHHHHHHHHHHHHCC----CcchhccccccCchH-----------HHHhhCCCccc
Confidence 4555555444333 235677888899988887763 333333322222221 23677788999
Q ss_pred cchHHHHHHhccccCCCccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCc
Q 007552 139 NEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDIS 218 (599)
Q Consensus 139 ~Ep~Aaal~y~~~~~~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~ 218 (599)
+||+|+++++..... ....|+|+|||+++++++. .++.++.....++...|+.+|++.+++++.-.+.
T Consensus 78 ne~~aha~a~~~~~~---~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~-------- 145 (276)
T 4ehu_A 78 SELSCHARGVNFIIP---ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVS-------- 145 (276)
T ss_dssp CHHHHHHHHHHHHST---TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGG--------
T ss_pred chHHHHHHHHHHhCC---CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChh--------
Confidence 999999988765543 2447899999999999884 5677888888888999999999888887642221
Q ss_pred cCHHHHHHHHHHHHHHHHHccCCcceEEEEecccCCcccee--------ecCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 007552 219 KDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSE--------PLTRARFEELNNDLFRKTMGPVKKAMEDAGL 290 (599)
Q Consensus 219 ~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~l~~~~~~~~--------~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~ 290 (599)
.-+ .+ .+....... +. ..+..+ .-.....++++..+.+.+.+.+.....+.
T Consensus 146 ~~~----~~---------~~~a~~~~~--i~----~~~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~~~~~-- 204 (276)
T 4ehu_A 146 ELG----SI---------SMNSQNEVS--IS----STCTVFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLVKRI-- 204 (276)
T ss_dssp GHH----HH---------HTTCSSCCC--CC----CCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred hhH----HH---------HhcCCCCCC--cC----CccchhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 100 00 000000000 00 000000 00011134566666666655554444433
Q ss_pred CccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhh
Q 007552 291 EKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 344 (599)
Q Consensus 291 ~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~l 344 (599)
..++.|+|+||.+++|.|++.+++.| +.++..+.+|++++|+|||++|...
T Consensus 205 --~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 205 --GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp --CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred --ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHH
Confidence 45788999999999999999999999 7888899999999999999999653
No 28
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.57 E-value=1.9e-15 Score=157.24 Aligned_cols=206 Identities=18% Similarity=0.223 Sum_probs=138.8
Q ss_pred ccEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeecccchHHHHHHhccccCC-----CccEEEEEEcCC
Q 007552 105 KDAVVTVPAYFNDAQR-QATKDAGIIAGL------------NVARIINEPTAAAIAYGLDKKG-----GEKNILVFDLGG 166 (599)
Q Consensus 105 ~~~VitVPa~~~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~Aaal~y~~~~~~-----~~~~vlVvD~Gg 166 (599)
..+++++|..+...+| +++++++..++- ..+.+++||.||++++..+... .+..++|+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3799999999988887 589988875542 4577999999999998765421 367899999999
Q ss_pred CEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHccCCcceEE
Q 007552 167 GTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRV 246 (599)
Q Consensus 167 gt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i 246 (599)
||||++++ .++.+ +....+...+||..+++.+.+++.+++. +.++.. ...++.+. +
T Consensus 194 gTtd~~v~--~~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~~---------~~i~~g~~---------~ 249 (355)
T 3js6_A 194 GTTIIDTY--QNMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASITP---------RMIEKGLE---------Y 249 (355)
T ss_dssp SCEEEEEE--ETTEE-CGGGCEEESCCHHHHHHHHHHHTC-----------CH---------HHHHSCCC----------
T ss_pred CcEEEEEE--cCCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCCH---------HHHhcCCc---------c
Confidence 99999998 34432 1112334679999999999998766531 222221 11111110 0
Q ss_pred EEecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHH--HHHHHHhHcCCCCCC
Q 007552 247 EIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPK--VQQLLKDYFDGKEPN 324 (599)
Q Consensus 247 ~i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~--v~~~l~~~f~~~~i~ 324 (599)
..... +..-.+.+ .+.+++.+++.+++|.+.|++.+.+ +..++.|+|+||++.++. |.+.+++.|+..
T Consensus 250 ~~~~~--~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~--- 319 (355)
T 3js6_A 250 KQCKL--NQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA--- 319 (355)
T ss_dssp --------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC---
T ss_pred ccccc--cccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC---
Confidence 00000 00001112 2356777777888888777777753 466899999999999998 899999998432
Q ss_pred CCCCCchhhhchHHHhhhhhcC
Q 007552 325 KGVNPDEAVAYGAAVQGGILSG 346 (599)
Q Consensus 325 ~~~~p~~aVA~GAa~~a~~ls~ 346 (599)
.||..|+|.|+..++..+..
T Consensus 320 --~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 --DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp --SSGGGHHHHHHHHHHHHHHH
T ss_pred --CCcHHHHHHHHHHHHHHHHh
Confidence 79999999999999987653
No 29
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.43 E-value=5.4e-13 Score=114.97 Aligned_cols=85 Identities=42% Similarity=0.807 Sum_probs=77.5
Q ss_pred hHHHHHHhhccHHHHHHHHHHHhchhhhhhccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 007552 495 KVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITA 574 (599)
Q Consensus 495 ~~~~~~~a~N~LE~~i~~~~~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~~t~~~~~~kl~~L~~~~~~i~~r 574 (599)
.++++.++||.||+|||.++..|.+. .+..+++++++..|...|+++.+||+.+.+++.++|+.++++|++++.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~-~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDE-GLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCG-GGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcch-hhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999874 48889999999999999999999999987889999999999999999999999
Q ss_pred HHhhcC
Q 007552 575 VYQRSG 580 (599)
Q Consensus 575 ~~e~~~ 580 (599)
+++..|
T Consensus 82 ~y~~~~ 87 (113)
T 3lof_A 82 LYQGAG 87 (113)
T ss_dssp HHHC--
T ss_pred HHHhcc
Confidence 998643
No 30
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.43 E-value=8.6e-14 Score=143.44 Aligned_cols=202 Identities=17% Similarity=0.214 Sum_probs=140.7
Q ss_pred ccEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeecccchHHHHHHhccccCCCccEEEEEEcCCCE
Q 007552 105 KDAVVTVPAYFND--AQRQATKDAGIIA--------G------LNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGT 168 (599)
Q Consensus 105 ~~~VitVPa~~~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaal~y~~~~~~~~~~vlVvD~Gggt 168 (599)
..+|+++|..+-. .+|+.+++....- | +..+.+++||.+|.+.+. ...+...++|+|+||||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~--~~~~~~~v~vvDiGggT 183 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ--ENFKNKNVAVIDFGGLN 183 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC--CCCTTCEEEEEEECSSC
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc--hhhccCCEEEEEeCCCc
Confidence 4799999998774 3677787766521 1 133668899998887652 22256899999999999
Q ss_pred EEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHh-hcCCCCccCHHHHHHHHHHHHHHHHHccCCcceEEE
Q 007552 169 FDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKK-KHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVE 247 (599)
Q Consensus 169 ~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~-~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~ 247 (599)
||++++. ++.+ +....+...+||..+++.|.+++. + +|+..+.. ..++++|+. .. .
T Consensus 184 td~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~----~~~~g~~i~~---------~~~e~i~~~--g~--~--- 240 (329)
T 4apw_A 184 MGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALT----DLNNGNLITN---------EQAESALNN--GY--M--- 240 (329)
T ss_dssp EEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSS----SCSSCSCTTS---------BTTTTCSSS--CS--S---
T ss_pred EEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHH----hhccCCCCCH---------HHHHHHHhc--CC--c---
Confidence 9999998 4443 222334568999999999987744 4 56655433 133333332 10 0
Q ss_pred EecccCCccceeecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCC
Q 007552 248 IESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGV 327 (599)
Q Consensus 248 i~~l~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~ 327 (599)
..+.+. ..+..+.+++.+++.++.|.+.|++. +..++.++.|+|+||++.+ +.+.+++.| +.++....
T Consensus 241 ----~~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~-~~~v~v~~ 308 (329)
T 4apw_A 241 ----KKGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTY-PNNSIITN 308 (329)
T ss_dssp ----CEECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHS-TTCEECCS
T ss_pred ----ccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHc-CCCCEecC
Confidence 011122 13556778888888888887777766 3455668999999999998 679999999 44566778
Q ss_pred CCchhhhchHHHhhhh
Q 007552 328 NPDEAVAYGAAVQGGI 343 (599)
Q Consensus 328 ~p~~aVA~GAa~~a~~ 343 (599)
||..|+|+|+..++..
T Consensus 309 ~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 309 NSQWTTCEGLYKVAVA 324 (329)
T ss_dssp SGGGHHHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHhh
Confidence 9999999999988754
No 31
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.24 E-value=7.2e-12 Score=109.00 Aligned_cols=89 Identities=44% Similarity=0.768 Sum_probs=74.2
Q ss_pred HHHHHHhhccHHHHHHHHHHHhchhhhhhccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 007552 496 VKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAV 575 (599)
Q Consensus 496 ~~~~~~a~N~LE~~i~~~~~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~~t~~~~~~kl~~L~~~~~~i~~r~ 575 (599)
++++.++||.||+|||.++..|.+. .+...++++++.+|...|+++.+||+++.+++.++|+.++++|++++.||..|+
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~-~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~ 91 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDE-KLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKL 91 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCT-TTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhch-hhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567889999999999999999763 377889999999999999999999987667889999999999999999999999
Q ss_pred HhhcCCCCCC
Q 007552 576 YQRSGGAPGA 585 (599)
Q Consensus 576 ~e~~~~~~~~ 585 (599)
++..|++||+
T Consensus 92 y~~~~~~~~~ 101 (120)
T 2p32_A 92 YQSAGGAPPG 101 (120)
T ss_dssp CCC-------
T ss_pred HHhccCCCCC
Confidence 8766666554
No 32
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.20 E-value=1.4e-11 Score=131.02 Aligned_cols=222 Identities=19% Similarity=0.128 Sum_probs=140.7
Q ss_pred ccEEEEeCCCCCHHHHHHHHHHH-HHcCCceeecccchHHHHHHhccccCC--CccEEEEEEcCCCEEEEEEEEEeCCeE
Q 007552 105 KDAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKG--GEKNILVFDLGGGTFDVSILTIDNGVF 181 (599)
Q Consensus 105 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~--~~~~vlVvD~Gggt~dvsv~~~~~~~~ 181 (599)
..++||.|+..+...|+.|.+.+ +..|++.+.++.+|.+|+++.+..... ...+-||+|+|+|+|+++.+. ++..
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~--~G~~ 201 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVA--EGYV 201 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEE--TTEE
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEE--CCEE
Confidence 47999999999999999998877 789999999999999999888753211 134679999999999999984 3321
Q ss_pred EEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHccCCcc-----------eEEEEe-
Q 007552 182 EVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQ-----------VRVEIE- 249 (599)
Q Consensus 182 ~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-----------~~i~i~- 249 (599)
+........+||+++|+.|.+++..+... ... ...++.+|+.+..-.. ....+.
T Consensus 202 -l~~~~~rl~~gG~~lt~~L~~lL~~~~~~------~~~-------~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~ 267 (427)
T 3dwl_A 202 -IGSSIKTMPLAGRDVTYFVQSLLRDRNEP------DSS-------LKTAERIKEECCYVCPDIVKEFSRFDREPDRYLK 267 (427)
T ss_dssp -CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CC
T ss_pred -ehhhheeccccHHHHHHHHHHHHHHcCCC------chh-------HHHHHHHHHhcCcccCCHHHHHHHhhcCccccce
Confidence 11111224799999999999886543221 000 1345555655432210 000011
Q ss_pred -cc--cCCccceeecCHHHH---HHHHHHH------HHHHHHHHHHHHHHhCC--CccCCCeEEEecCCCCcHHHHHHHH
Q 007552 250 -SL--FDGIDFSEPLTRARF---EELNNDL------FRKTMGPVKKAMEDAGL--EKNQIDEIVLVGGSTRIPKVQQLLK 315 (599)
Q Consensus 250 -~l--~~~~~~~~~itr~~f---e~~~~~~------~~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~srip~v~~~l~ 315 (599)
.+ .+|....+.+..+.| |-++.|- ...|.++|.++|.++.. .+.-...|+|+||+|.+|.+.++|+
T Consensus 268 ~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~ 347 (427)
T 3dwl_A 268 YASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQ 347 (427)
T ss_dssp BCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHH
T ss_pred eEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHH
Confidence 01 233434567777776 3455552 23577777777776431 1222356999999999999999998
Q ss_pred hHc----C---------------C--CCCCCCCCCchhhhchHHHhhh
Q 007552 316 DYF----D---------------G--KEPNKGVNPDEAVAYGAAVQGG 342 (599)
Q Consensus 316 ~~f----~---------------~--~~i~~~~~p~~aVA~GAa~~a~ 342 (599)
+.+ + . .++..+.++..++=+|++++|.
T Consensus 348 ~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 348 RDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 755 1 1 1223345667899999999986
No 33
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.17 E-value=2.5e-11 Score=104.58 Aligned_cols=85 Identities=46% Similarity=0.841 Sum_probs=73.3
Q ss_pred HHHhhccHHHHHHHHHHHhchhhhhhccCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007552 499 KIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQR 578 (599)
Q Consensus 499 ~~~a~N~LE~~i~~~~~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~~t~~~~~~kl~~L~~~~~~i~~r~~e~ 578 (599)
+.++||.||+|||.++..|.+.+ +...++++++.+|...|+++++||+++.+++.++|+.++++|++++.||..|+++.
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e-~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~ 80 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEK-LQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQS 80 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGG-GTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHHHhcchh-hhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56789999999999999997422 78899999999999999999999986555678999999999999999999999976
Q ss_pred cCCCCC
Q 007552 579 SGGAPG 584 (599)
Q Consensus 579 ~~~~~~ 584 (599)
.|++||
T Consensus 81 ~~~~~~ 86 (113)
T 1ud0_A 81 AGGMPG 86 (113)
T ss_dssp SCCCCC
T ss_pred ccCCCC
Confidence 666554
No 34
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.12 E-value=2e-11 Score=128.39 Aligned_cols=197 Identities=22% Similarity=0.218 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHc-CC--ceeecccchHHHHHHhccccCCCccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCc
Q 007552 117 DAQRQATKDAGIIA-GL--NVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLG 193 (599)
Q Consensus 117 ~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lG 193 (599)
..+-+.+.+|.+.+ |+ ++-. .||.||+++...+ ...+..+.++||||||||++++.-....+ ......|
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTe-DE~eLGvaiIDmGGGTTd~sVf~~G~lv~-----a~~ip~g 438 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTT-PGTTRPLAILDLGAGSTDASIINPKGDII-----ATHLAGA 438 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTS-TTCCSSEEEEEECSSEEEEEEECTTCCEE-----EEEEECS
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCC-CCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccc
Confidence 34567888999999 99 6666 9999999987544 33577899999999999999987444332 2235789
Q ss_pred cchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHccCC----------cceEEEE--ecccCC---c---
Q 007552 194 GEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQ----------HQVRVEI--ESLFDG---I--- 255 (599)
Q Consensus 194 G~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~i~i--~~l~~~---~--- 255 (599)
|+.++..|..-| +.+- +..||++|+ .... ....+.+ +.+... .
T Consensus 439 G~~VT~DIA~~L--------gt~d----------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv~~ 499 (610)
T 2d0o_A 439 GDMVTMIIAREL--------GLED----------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCV 499 (610)
T ss_dssp HHHHHHHHHHHH--------TCCC----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEE
T ss_pred hHHHHHHHHHHh--------CCCC----------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeec
Confidence 999998886543 2210 167889998 4221 2223444 322111 1
Q ss_pred ---cceeecCHHH--HHHHHHHHHHHHHHH--HHHHHHHhCC-----CccCCCeEEEecCCCCcHHHHHHHHhHcCCCCC
Q 007552 256 ---DFSEPLTRAR--FEELNNDLFRKTMGP--VKKAMEDAGL-----EKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP 323 (599)
Q Consensus 256 ---~~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i 323 (599)
+.-..| +.. +|+ ++-+-+++.+. +...|+..+. +..+|..|+|+||+|.+|.+.+..++.|+.-++
T Consensus 500 ~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~V 577 (610)
T 2d0o_A 500 VKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRL 577 (610)
T ss_dssp ECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSC
T ss_pred ccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCe
Confidence 112244 555 666 55555554443 3333554332 245679999999999999999999999943132
Q ss_pred -------CCCCCCchhhhchHHHhhh
Q 007552 324 -------NKGVNPDEAVAYGAAVQGG 342 (599)
Q Consensus 324 -------~~~~~p~~aVA~GAa~~a~ 342 (599)
...-.|..|+|.|.+++.+
T Consensus 578 RiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 578 VAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp EEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred EEecCCccccCCCcHHHHHHHHHHHh
Confidence 2245899999999998764
No 35
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.09 E-value=3.1e-11 Score=127.44 Aligned_cols=195 Identities=20% Similarity=0.157 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHc-CC--ceeecccchHHHHHHhccccCCCccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccc
Q 007552 119 QRQATKDAGIIA-GL--NVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGE 195 (599)
Q Consensus 119 qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~ 195 (599)
+-+.+.+|.+.+ |+ ++-. .||.||+++...+ ...+..+.++||||||||++++.-....+ ......||+
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTe-dE~elGvaiIDmGgGTTd~sVf~~g~lv~-----a~~ip~gG~ 442 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTT-PGCAAPLAILDLGAGSTDAAIVNAEGQIT-----AVHLAGAGN 442 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTS-TTCCSSEEEEEECSSEEEEEEECSSSCEE-----EEEEECCHH
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCC-CCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccchH
Confidence 446778888888 99 6666 9999999987544 33577899999999999999997444432 223578999
Q ss_pred hHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHccCC----------cceEEEE--ecccCC---c-----
Q 007552 196 DFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQ----------HQVRVEI--ESLFDG---I----- 255 (599)
Q Consensus 196 ~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~i~i--~~l~~~---~----- 255 (599)
.++..|..-|. .+- +..||++|+ .... ....+.+ +.+... .
T Consensus 443 ~VT~DIA~~Lg--------~~d----------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~~~~ 503 (607)
T 1nbw_A 443 MVSLLIKTELG--------LED----------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIK 503 (607)
T ss_dssp HHHHHHHHHHT--------CSC----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEEE
T ss_pred HHHHHHHHHhC--------CCC----------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeeccc
Confidence 99988865432 210 167889998 4221 1223444 322111 1
Q ss_pred -cceeecCHHH--HHHHHHHHHHHHHHH--HHHHHHHhCCC-----ccCCCeEEEecCCCCcHHHHHHHHhHcCCCCC--
Q 007552 256 -DFSEPLTRAR--FEELNNDLFRKTMGP--VKKAMEDAGLE-----KNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP-- 323 (599)
Q Consensus 256 -~~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~~-----~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i-- 323 (599)
+.-..| +.. +|+ ++-+-+++.+. +...|+..+.. ..+|..|+|+||+|.+|.+.+..++.|+.-++
T Consensus 504 ~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRi 581 (607)
T 1nbw_A 504 EGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVA 581 (607)
T ss_dssp TTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEE
T ss_pred ccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEE
Confidence 111234 445 666 55555554443 45557776653 34568999999999999999999999943122
Q ss_pred -----CCCCCCchhhhchHHHhhh
Q 007552 324 -----NKGVNPDEAVAYGAAVQGG 342 (599)
Q Consensus 324 -----~~~~~p~~aVA~GAa~~a~ 342 (599)
...-.|..|+|.|.+++.+
T Consensus 582 GrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 582 GQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp EECCGGGTSCSCCHHHHHHHHHHH
T ss_pred ecCCccccCCchHHHHHHHHHhhh
Confidence 2245899999999998653
No 36
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.03 E-value=5.2e-10 Score=120.22 Aligned_cols=93 Identities=18% Similarity=0.258 Sum_probs=74.9
Q ss_pred cEEEEeCCCCCHHHHHHHHHHH-HHcCCceeecccchHHHHHHhccccCCCccEEEEEEcCCCEEEEEEEEEeCCeEEEE
Q 007552 106 DAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVL 184 (599)
Q Consensus 106 ~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~ 184 (599)
.++||.|+..+...|+.|.+.+ +.+|++.+.++.+|.||+++++.. +-||||+|+|+|+++.+. +|.. +.
T Consensus 116 pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~------tglVVDiG~g~T~vvPI~--~G~~-l~ 186 (498)
T 3qb0_A 116 PALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP------NCLVVDIGHDTCSVSPIV--DGMT-LS 186 (498)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS------SEEEEEECSSCEEEEEEE--TTEE-CG
T ss_pred ceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCC------eEEEEEcCCCcEEEEEEe--CCEE-cc
Confidence 5899999999999999998865 789999999999999999888752 249999999999999985 3321 11
Q ss_pred EecCCCCCccchHhHHHHHHHHH
Q 007552 185 STNGDTHLGGEDFDQRVMEYFIK 207 (599)
Q Consensus 185 ~~~~~~~lGG~~iD~~l~~~~~~ 207 (599)
.......+||+++|+.|.++|..
T Consensus 187 ~ai~rl~vgG~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 187 KSTRRNFIAGKFINHLIKKALEP 209 (498)
T ss_dssp GGCEEESCSHHHHHHHHHHHTTT
T ss_pred ccceeccccHHHHHHHHHHHHHh
Confidence 11122579999999999988753
No 37
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=98.76 E-value=6.9e-08 Score=107.44 Aligned_cols=111 Identities=18% Similarity=0.250 Sum_probs=84.2
Q ss_pred HHHHHHHHHH-HHhCCCccc-----EEEEeCCCCCHHHHHHHHHH-HHHcCCceeecccchHHHHHHhccccCCCccEEE
Q 007552 88 ILTKMKETAE-AFLGKKIKD-----AVVTVPAYFNDAQRQATKDA-GIIAGLNVARIINEPTAAAIAYGLDKKGGEKNIL 160 (599)
Q Consensus 88 ~L~~l~~~a~-~~~~~~~~~-----~VitVPa~~~~~qr~~l~~A-a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vl 160 (599)
-+..|++++- ..++....+ ++||.|..|+...|+.|.+. .+.-|++.+.++.++.||++++|.. +-+
T Consensus 176 d~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~------tgl 249 (593)
T 4fo0_A 176 DIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS------STC 249 (593)
T ss_dssp HHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS------EEE
T ss_pred HHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC------ceE
Confidence 3566777775 456655443 99999999999999988665 5677999999999999999988753 569
Q ss_pred EEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHH
Q 007552 161 VFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIK 207 (599)
Q Consensus 161 VvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~ 207 (599)
|||+|++.|+|+-+. +|.. +........+||.++++.|.+.|..
T Consensus 250 VVDiG~~~T~v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~ 293 (593)
T 4fo0_A 250 IVDVGDQKTSVCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQR 293 (593)
T ss_dssp EEEECSSCEEEEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCceeeeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHh
Confidence 999999999999875 3321 1111122479999999999888654
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.19 E-value=1.7e-05 Score=78.79 Aligned_cols=73 Identities=19% Similarity=0.206 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhh
Q 007552 267 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 344 (599)
Q Consensus 267 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~l 344 (599)
++++..+++.+...+.+.+...+ -.+.|+++||.++.|.+++.+.+.+ +.++..+.+|+.+.|+|||++|...
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~----~~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVG----IVKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC----CCSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC----CCCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 34444455555444444444321 1367999999999999999999999 7788777788889999999998753
No 39
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.09 E-value=6.4e-06 Score=89.68 Aligned_cols=139 Identities=18% Similarity=0.236 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHH--HhCCCc-----ccEEEEeCCCCCHHHHHHHHHHH-HHcCCceeecccchHHHHHHhccccCCCccE
Q 007552 87 MILTKMKETAEA--FLGKKI-----KDAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKGGEKN 158 (599)
Q Consensus 87 ~~L~~l~~~a~~--~~~~~~-----~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~ 158 (599)
..++.+++++-. .++... ..++||.|+.++...|+.|.+.+ +..|++.+.++.+|.||+++++. ...
T Consensus 197 D~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-----~tt 271 (655)
T 4am6_A 197 SDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-----STS 271 (655)
T ss_dssp HHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-----SSC
T ss_pred HHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-----CCc
Confidence 444556655543 444443 36999999999999999998877 56899999999999999988874 235
Q ss_pred EEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcC---CCCccCHHHHHHHHHHHHHHH
Q 007552 159 ILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG---KDISKDKRAIGKLRREAERAK 235 (599)
Q Consensus 159 vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~---~~~~~~~~~~~~L~~~~e~~K 235 (599)
-||||+|+|+|+++.+. +|.. +........+||+++|..|.++|..+ .|. ..+.. . .=+..++.+|
T Consensus 272 GLVVDiG~g~T~VvPV~--eG~v-l~~ai~rL~iGG~dLT~yL~kLL~~r---gypy~~~~f~t--~---~e~eiVrdIK 340 (655)
T 4am6_A 272 TCVVNIGAAETRIACVD--EGTV-LEHSAITLDYGGDDITRLFALFLLQS---DFPLQDWKIDS--K---HGWLLAERLK 340 (655)
T ss_dssp EEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHHHHHT---TCSCCSCCTTS--H---HHHHHHHHHH
T ss_pred eEEEcCCCceEEEEEEe--CCEE-EhhheeeecchHHHHHHHHHHHHHHc---CCCccccCCCC--c---chHHHHHHHH
Confidence 69999999999999984 3321 11111225799999999999887643 110 11111 1 1125577788
Q ss_pred HHccCC
Q 007552 236 RALSSQ 241 (599)
Q Consensus 236 ~~Ls~~ 241 (599)
+.++.-
T Consensus 341 Ek~CyV 346 (655)
T 4am6_A 341 KNFTTF 346 (655)
T ss_dssp HHHCCC
T ss_pred HheEEE
Confidence 887655
No 40
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.22 E-value=0.0032 Score=62.49 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=53.9
Q ss_pred cCHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecC-CCCcHHHHHHHHhHc--CCCCCCCCCCCchhhhch
Q 007552 261 LTRARFE-ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGG-STRIPKVQQLLKDYF--DGKEPNKGVNPDEAVAYG 336 (599)
Q Consensus 261 itr~~fe-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG-~srip~v~~~l~~~f--~~~~i~~~~~p~~aVA~G 336 (599)
.+++++- .++.-+.++|..+...+.+.. .++.|+++|| .+..|.+++.+.+.+ .+.++..+.+|..+.|.|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~-----~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREF-----KTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 4555443 244444444444444433342 3557999999 899999999999974 467788888999999999
Q ss_pred HHHhh
Q 007552 337 AAVQG 341 (599)
Q Consensus 337 Aa~~a 341 (599)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99875
No 41
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.86 E-value=0.0096 Score=60.77 Aligned_cols=47 Identities=21% Similarity=0.050 Sum_probs=40.8
Q ss_pred CCeEEEecC-CCCcHHHHHHHHhHc-----CCCCCCCCCCCchhhhchHHHhh
Q 007552 295 IDEIVLVGG-STRIPKVQQLLKDYF-----DGKEPNKGVNPDEAVAYGAAVQG 341 (599)
Q Consensus 295 i~~ViLvGG-~srip~v~~~l~~~f-----~~~~i~~~~~p~~aVA~GAa~~a 341 (599)
++.|+++|| .+..|.+++.|++.+ ++.++..+.+|..+-|+|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 456999999 899999999999986 34677778899999999999976
No 42
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.09 E-value=0.0085 Score=65.62 Aligned_cols=87 Identities=18% Similarity=0.155 Sum_probs=63.9
Q ss_pred eecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHH
Q 007552 259 EPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAA 338 (599)
Q Consensus 259 ~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa 338 (599)
..-+|.++-.+++-+++.+.-.++..++...-....++.|.++||++++|.+.+.+.+.| +.++..+ ...++.|+|||
T Consensus 407 ~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA 484 (554)
T 3l0q_A 407 LSTTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSA 484 (554)
T ss_dssp SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHH
Confidence 345788875546666666665555555433222345889999999999999999999999 7877664 45689999999
Q ss_pred HhhhhhcCC
Q 007552 339 VQGGILSGE 347 (599)
Q Consensus 339 ~~a~~ls~~ 347 (599)
+.|+.-.+.
T Consensus 485 ~lA~~a~G~ 493 (554)
T 3l0q_A 485 MMGTVAAGV 493 (554)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHcCC
Confidence 999875554
No 43
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.06 E-value=0.0073 Score=64.95 Aligned_cols=82 Identities=18% Similarity=0.188 Sum_probs=57.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHh
Q 007552 261 LTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 340 (599)
Q Consensus 261 itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 340 (599)
-++.++ ++-+++.+.-.++.+++........++.|.++||++++|.+.+.+.+.+ +.++.....++.+.|+|||+.
T Consensus 356 ~~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 356 HGPNEL---ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHH
Confidence 355444 4445555544444444433212245778999999999999999999999 788877655554689999999
Q ss_pred hhhhcC
Q 007552 341 GGILSG 346 (599)
Q Consensus 341 a~~ls~ 346 (599)
|+.-.+
T Consensus 432 A~~~~g 437 (484)
T 2itm_A 432 AQIAAN 437 (484)
T ss_dssp HHHHHC
T ss_pred HHHHcC
Confidence 986554
No 44
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.98 E-value=0.011 Score=64.50 Aligned_cols=77 Identities=16% Similarity=0.132 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhc
Q 007552 267 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 345 (599)
Q Consensus 267 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls 345 (599)
..+++-+++.+.-.++..++..+.....++.|.++||++++|.+.+.+.+.| +.++... .+.++.|+|||+.|+.-.
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHh
Confidence 4556666666666666677765544456789999999999999999999999 7777654 567899999999997644
No 45
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.86 E-value=0.013 Score=63.28 Aligned_cols=76 Identities=20% Similarity=0.218 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcC
Q 007552 268 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 346 (599)
Q Consensus 268 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~ 346 (599)
.+++-+++.+.-.++..++...... .++.|.++||++++|.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 368 ~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 368 HLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHHHHHhC
Confidence 3445556666666666666543333 6788999999999999999999999 7777654 4466999999999986554
No 46
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.84 E-value=0.012 Score=63.64 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=59.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCC-CCCCCCchhhhchHHH
Q 007552 261 LTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP-NKGVNPDEAVAYGAAV 339 (599)
Q Consensus 261 itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i-~~~~~p~~aVA~GAa~ 339 (599)
-+|.++ ++-+++.+.-.++..++...- .. ++.|.++||++++|.+.+.+.+.+ +.++ .. ..+.++.|+|||+
T Consensus 374 ~~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~~e~~alGaA~ 446 (511)
T 3hz6_A 374 TTRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVK-PDAHLHPLRGLAA 446 (511)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEEC-CCGGGHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEe-cCCCCchHHHHHH
Confidence 355444 555566665555555555433 34 889999999999999999999999 7887 54 3588999999999
Q ss_pred hhhhhcCC
Q 007552 340 QGGILSGE 347 (599)
Q Consensus 340 ~a~~ls~~ 347 (599)
.|+.-.+.
T Consensus 447 lA~~a~G~ 454 (511)
T 3hz6_A 447 LAAVELEW 454 (511)
T ss_dssp HHHHHTTS
T ss_pred HHHHHhCC
Confidence 99876554
No 47
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.78 E-value=0.013 Score=63.32 Aligned_cols=81 Identities=12% Similarity=0.051 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhh
Q 007552 262 TRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQG 341 (599)
Q Consensus 262 tr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a 341 (599)
++.++ ++-+++.+.-.++..++...-....++.|.++||++++|.+.+.+.+.| +.++... .+.++.|+|||+.|
T Consensus 364 ~~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA 438 (504)
T 3ll3_A 364 QKPEM---ARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLA 438 (504)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHH
Confidence 55544 4455555544444444432111235889999999999999999999999 7777654 46779999999999
Q ss_pred hhhcCC
Q 007552 342 GILSGE 347 (599)
Q Consensus 342 ~~ls~~ 347 (599)
+.-.+.
T Consensus 439 ~~a~G~ 444 (504)
T 3ll3_A 439 RQALGL 444 (504)
T ss_dssp HHHTTS
T ss_pred HHHcCc
Confidence 875544
No 48
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.74 E-value=0.01 Score=64.32 Aligned_cols=78 Identities=23% Similarity=0.382 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHH---HHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHH
Q 007552 262 TRARFEELNNDLFRKTMGPVKK---AMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAA 338 (599)
Q Consensus 262 tr~~fe~~~~~~~~~i~~~i~~---~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa 338 (599)
++.++ ++-+++.+.-.++. .|++.+ ..++.|.++||++++|.+.+.+.+.| +.++... .+.++.|+|||
T Consensus 395 ~~~~l---~RAvlEgia~~~r~~l~~l~~~g---~~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA 466 (515)
T 3i8b_A 395 TRENL---ARAFVEGLLCSQRDCLELIRSLG---ASITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAA 466 (515)
T ss_dssp SHHHH---HHHHHHHHHHHHHHHHHHHHHTT---CCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcC---CCCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHH
Confidence 55544 44444444433333 333434 35789999999999999999999999 7777654 45779999999
Q ss_pred HhhhhhcCC
Q 007552 339 VQGGILSGE 347 (599)
Q Consensus 339 ~~a~~ls~~ 347 (599)
+.|+.-.+.
T Consensus 467 ~lA~~a~G~ 475 (515)
T 3i8b_A 467 RQAAWVLSG 475 (515)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHcCC
Confidence 999875543
No 49
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.31 E-value=0.016 Score=62.47 Aligned_cols=81 Identities=17% Similarity=0.231 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHh
Q 007552 262 TRARFEELNNDLFRKTMGPVKKAMEDAG-LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 340 (599)
Q Consensus 262 tr~~fe~~~~~~~~~i~~~i~~~l~~~~-~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 340 (599)
+|.++ ++-+++.+.-.++.+++... .....++.|.++||++++|.+.+.+.+.| +.++... .+.++.|+|||+.
T Consensus 374 ~~~~l---~RAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHF---IRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFL 448 (501)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHH
Confidence 45544 34444444444444333221 01235789999999999999999999999 7777553 4678999999999
Q ss_pred hhhhcCC
Q 007552 341 GGILSGE 347 (599)
Q Consensus 341 a~~ls~~ 347 (599)
|+.-.+.
T Consensus 449 a~~a~G~ 455 (501)
T 3g25_A 449 AGLAVGF 455 (501)
T ss_dssp HHHHTTS
T ss_pred HHHHhCc
Confidence 9876554
No 50
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.24 E-value=0.028 Score=60.54 Aligned_cols=80 Identities=18% Similarity=0.204 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHh
Q 007552 262 TRARFEELNNDLFRKTMGPVKKAMEDAG-LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 340 (599)
Q Consensus 262 tr~~fe~~~~~~~~~i~~~i~~~l~~~~-~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 340 (599)
++.++ ++-+++.+.-.++..++... .....++.|.++||++++|.+.+.+.+.+ +.++... .+.++.|+|||+.
T Consensus 368 ~~~~~---~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~l 442 (495)
T 2dpn_A 368 SRAHL---ARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALM 442 (495)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHH
Confidence 45443 44445555444444444331 12235678999999999999999999999 7777654 4567999999999
Q ss_pred hhhhcC
Q 007552 341 GGILSG 346 (599)
Q Consensus 341 a~~ls~ 346 (599)
|+.-.+
T Consensus 443 a~~a~G 448 (495)
T 2dpn_A 443 AGVGAG 448 (495)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 976544
No 51
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.23 E-value=0.017 Score=63.45 Aligned_cols=80 Identities=16% Similarity=0.207 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCC-CcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHh
Q 007552 262 TRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGST-RIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 340 (599)
Q Consensus 262 tr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-rip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 340 (599)
+|.+| ++-+++.+.-.++.+++...-....++.|.++||++ ++|.+.+.+.+.| +.++... .+.++.|+|||+.
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHHH
Confidence 56554 555555554444444443221234578999999999 9999999999999 7777554 4678999999999
Q ss_pred hhhhcC
Q 007552 341 GGILSG 346 (599)
Q Consensus 341 a~~ls~ 346 (599)
|+.-.+
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987555
No 52
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.17 E-value=0.016 Score=62.72 Aligned_cols=52 Identities=21% Similarity=0.168 Sum_probs=43.9
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcCC
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 347 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~ 347 (599)
.++.|.++||++++|.+.+.+.+.| +.++..... .++.|+|||+.|+.-.+.
T Consensus 400 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA~lA~~a~G~ 451 (508)
T 3ifr_A 400 APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAAWVAAIGGGD 451 (508)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHHHHHHHHhCC
Confidence 4788999999999999999999999 788766543 568999999999875553
No 53
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.08 E-value=0.015 Score=63.00 Aligned_cols=52 Identities=21% Similarity=0.146 Sum_probs=43.4
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcCC
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 347 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~ 347 (599)
.++.|.++||++++|.+.+.+.+.+ +.++..+ .+.++.|+|||++|+.-.+.
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G~ 476 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAGV 476 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcCC
Confidence 5788999999999999999999999 7777654 46789999999999876654
No 54
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.07 E-value=0.031 Score=60.66 Aligned_cols=53 Identities=23% Similarity=0.313 Sum_probs=45.4
Q ss_pred cCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcCC
Q 007552 293 NQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 347 (599)
Q Consensus 293 ~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~ 347 (599)
..++.|.++||++++|.+.+.+.+.| +.++..+ ...|+.|+|||+.|+.-.+.
T Consensus 401 ~~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~lA~~a~G~ 453 (526)
T 3ezw_A 401 IRLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVGF 453 (526)
T ss_dssp CCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHHHHHHHhCC
Confidence 35789999999999999999999999 7887654 45689999999999876654
No 55
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.06 E-value=0.02 Score=61.88 Aligned_cols=52 Identities=23% Similarity=0.298 Sum_probs=44.6
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcCC
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 347 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~ 347 (599)
.++.|.++||++++|.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.+.
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~ 454 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYLAGLAVGF 454 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHHHHHHhCc
Confidence 5788999999999999999999999 7777553 56789999999999876554
No 56
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.97 E-value=0.019 Score=62.16 Aligned_cols=52 Identities=23% Similarity=0.337 Sum_probs=44.4
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcCC
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 347 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~ 347 (599)
.++.|.++||+++++.+.+.+.+.+ +.++... .+.++.|+|||+.|+.-.+.
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~ 452 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVGF 452 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHHTS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHHhCc
Confidence 5788999999999999999999999 7777654 46789999999999876554
No 57
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=94.90 E-value=0.32 Score=48.91 Aligned_cols=76 Identities=18% Similarity=0.235 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCCceeecccchHHHHHHhccccCC--CccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHh
Q 007552 121 QATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG--GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFD 198 (599)
Q Consensus 121 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~--~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD 198 (599)
..+..+-+..|+++--+=.|-+|...+.+..... .....+|+|+|||+|.+++++ ++.+.. ....++|...+.
T Consensus 93 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vrl~ 167 (315)
T 3mdq_A 93 VLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEILW---KQSFEIGGQRLI 167 (315)
T ss_dssp HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCEEE---EEEESCCHHHHH
T ss_pred HHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeEee---eEEEechhhHHH
Confidence 3445555567998755555555544433332221 235789999999999999986 332211 223578887776
Q ss_pred HHH
Q 007552 199 QRV 201 (599)
Q Consensus 199 ~~l 201 (599)
+.+
T Consensus 168 e~f 170 (315)
T 3mdq_A 168 DRF 170 (315)
T ss_dssp HHS
T ss_pred HHh
Confidence 543
No 58
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.78 E-value=0.025 Score=61.14 Aligned_cols=51 Identities=27% Similarity=0.373 Sum_probs=43.6
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcC
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 346 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~ 346 (599)
.++.|.++||++++|.+.+.+.+.+ +.++... .+.++.|+|||+.|+.-.+
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~G 453 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYAAGIAVG 453 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHHHHhhcC
Confidence 4678999999999999999999999 7777654 4577999999999986554
No 59
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=94.68 E-value=0.1 Score=52.44 Aligned_cols=76 Identities=16% Similarity=0.085 Sum_probs=50.3
Q ss_pred HHHHHHHHHcCCceeecccchHHHHHHhccccCC-CccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhH
Q 007552 121 QATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQ 199 (599)
Q Consensus 121 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~-~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~ 199 (599)
..+..+-+..|+++-.+-.|.+|...+.+..... .....+|+|+|||+|.+++++ ++.+.. ..+.++|+..+.+
T Consensus 101 ~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~~~---~~Sl~~G~v~l~e 175 (315)
T 1t6c_A 101 EFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKVRE---VISLPIGIVNLTE 175 (315)
T ss_dssp HHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEEEE---EEEECCCHHHHHH
T ss_pred HHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCceee---EEEEeccHHHHHH
Confidence 4444455578999866666777765544433222 256799999999999999975 443321 2236899988877
Q ss_pred HH
Q 007552 200 RV 201 (599)
Q Consensus 200 ~l 201 (599)
.+
T Consensus 176 ~~ 177 (315)
T 1t6c_A 176 TF 177 (315)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 60
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.50 E-value=0.033 Score=60.08 Aligned_cols=52 Identities=21% Similarity=0.227 Sum_probs=43.4
Q ss_pred CC-CeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhhhcCC
Q 007552 294 QI-DEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 347 (599)
Q Consensus 294 ~i-~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ls~~ 347 (599)
.+ +.|.++||++++|.+.+.+.+.+ +.++... .+.++.|+|||+.|+.-.+.
T Consensus 406 ~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~~~G~ 458 (503)
T 2w40_A 406 EMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAGLEVKI 458 (503)
T ss_dssp SCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTTC
T ss_pred CccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHHHHhCc
Confidence 35 78999999999999999999999 7777654 45679999999999865543
No 61
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.05 E-value=0.045 Score=58.77 Aligned_cols=47 Identities=23% Similarity=0.248 Sum_probs=39.4
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhh
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGI 343 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ 343 (599)
.++.|.++||++++|.+.+.+.+.+ +.++.... .++.|.|||+.|..
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIGIQLM 439 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHHHHHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHHHHHH
Confidence 4678999999999999999999999 78876442 68999999666543
No 62
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=93.95 E-value=1.9 Score=43.52 Aligned_cols=69 Identities=19% Similarity=0.234 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcC--CCCCCCCC---CCchhhhchHHHhhhhhcC
Q 007552 273 LFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFD--GKEPNKGV---NPDEAVAYGAAVQGGILSG 346 (599)
Q Consensus 273 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~--~~~i~~~~---~p~~aVA~GAa~~a~~ls~ 346 (599)
+.+.+.+.+.++++..+ ++.|+|+||.+....+++.+.+.+. +.++..+. ..|.++++|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 34444555666666544 5789999999999999999998772 33433322 3588999999876554443
No 63
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=92.53 E-value=4.1 Score=40.04 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=37.7
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhh
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGI 343 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ 343 (599)
+++.|+|.||.+..|.+.+.+++.+...++.... .+.+.+.||+.++..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 5678999999887788888888887444555555 668899999988753
No 64
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=92.11 E-value=0.67 Score=46.50 Aligned_cols=88 Identities=10% Similarity=0.082 Sum_probs=51.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHH-----------------HHHHHHHHHHHc-CCceeecccch
Q 007552 80 SPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDA-----------------QRQATKDAGIIA-GLNVARIINEP 141 (599)
Q Consensus 80 s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~-----------------qr~~l~~Aa~~A-Gl~~~~li~Ep 141 (599)
++++++..+.+.+.+... ...++..+.|++|...+.. -++.+. +.. |++ +.+.|+.
T Consensus 55 ~~~~~~~~i~~~i~~~~~--~~~~i~gigi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~---~~~~~~p-V~v~NDa 128 (321)
T 3r8e_A 55 NGIGFVESMKLEIGNFLK--QYPIVKGVGIGWPGLVSLDRTKVILLPNIPSVVNVPIVEILR---SEFPHIH-FKIENDA 128 (321)
T ss_dssp TTTCHHHHHHHHHHHHHH--HCTTCCEEEEEESSEECTTSCCEEEBTTBCCCCSCCHHHHHH---HHCTTSE-EEEEEHH
T ss_pred CHHHHHHHHHHHHHHHHh--ccCCeeEEEEEecccEECCCCEEEeCCCCccccCCCHHHHHH---HHcCCCC-EEEEchH
Confidence 345565555555544433 2456777888888754311 122232 234 665 6799999
Q ss_pred HHHHHHhccccC-CCccEEEEEEcCCCEEEEEEE
Q 007552 142 TAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 174 (599)
Q Consensus 142 ~Aaal~y~~~~~-~~~~~vlVvD~Gggt~dvsv~ 174 (599)
.|+|++-..... ....+++++-+|.| .-.+++
T Consensus 129 ~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii 161 (321)
T 3r8e_A 129 KCAALGEYYFGENKRMQTFILLALGTG-VGSGVM 161 (321)
T ss_dssp HHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 999986533221 13456788888888 444444
No 65
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=91.91 E-value=0.2 Score=53.63 Aligned_cols=71 Identities=13% Similarity=0.053 Sum_probs=53.7
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhH-cCCCCCCCCCCCchhhhchHHHhhhh
Q 007552 267 EELNNDLFRK--TMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDY-FDGKEPNKGVNPDEAVAYGAAVQGGI 343 (599)
Q Consensus 267 e~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~-f~~~~i~~~~~p~~aVA~GAa~~a~~ 343 (599)
..+.+-+++. +.-.++.+++... ..+.|.++||++++|.+.+.+.+. | +.++..+ ...++.|+|||++|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~-~~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRP-DCAVYTA-NAHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHST-TSEEEEE-SSCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEc-CCCchHHHHHHHHhCc
Confidence 4556666663 5555666666543 126899999999999999999999 9 7887665 3467899999999975
No 66
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=91.65 E-value=12 Score=37.45 Aligned_cols=64 Identities=17% Similarity=0.180 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcC--CCCCCCCC---CCchhhhchHHHhhhh
Q 007552 275 RKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFD--GKEPNKGV---NPDEAVAYGAAVQGGI 343 (599)
Q Consensus 275 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~--~~~i~~~~---~p~~aVA~GAa~~a~~ 343 (599)
+.+.+.+.++.+.. .++.|+|+||.+....+++.|.+.+. +.++..+. ..|.++++|+|.+...
T Consensus 230 ~~l~~~~~~~~~~~-----~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 230 AALVEVTERAVAHT-----EKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHH-----CCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 33344445554443 36689999999999999999998762 34444433 3467888888876543
No 67
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=91.30 E-value=13 Score=37.10 Aligned_cols=88 Identities=15% Similarity=0.192 Sum_probs=53.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHH----------------HHHHHHHHHHHcCCceeecccchHH
Q 007552 80 SPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDA----------------QRQATKDAGIIAGLNVARIINEPTA 143 (599)
Q Consensus 80 s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~----------------qr~~l~~Aa~~AGl~~~~li~Ep~A 143 (599)
+++++...+...+.+..... + .+..+.|++|...+.. -++.+.+. .|++ +.+.|+..|
T Consensus 59 ~~~~~~~~i~~~i~~~~~~~-~-~~~gigi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~---~~~p-V~v~NDa~a 132 (327)
T 4db3_A 59 DYPLLLETIAGLVAKYDQEF-A-CEGKIGLGLPGMEDADDATVLTVNVPAAKGKPLRADLEAK---IGRS-VKIENDANC 132 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-T-SCCEEEEEESEEECTTTCCEEESSSGGGTTSCHHHHHHHH---HSSC-CEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhc-C-CccEEEEEeeccEeCCCCEEEcCCCccccCCCHHHHHHHH---HCCC-EEEecchhH
Confidence 56777666666655544332 2 3556778887754421 13444433 3776 689999999
Q ss_pred HHHHhccccCC-CccEEEEEEcCCCEEEEEEE
Q 007552 144 AAIAYGLDKKG-GEKNILVFDLGGGTFDVSIL 174 (599)
Q Consensus 144 aal~y~~~~~~-~~~~vlVvD~Gggt~dvsv~ 174 (599)
+|++-...... ....++++-+|.| .-.+++
T Consensus 133 aalgE~~~g~~~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 133 FALSEAWDEELQDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp HHHHHHTSTTTTTCSEEEEEEESSS-EEEEEE
T ss_pred HHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEE
Confidence 99875433222 3567888888887 444444
No 68
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=90.62 E-value=12 Score=37.20 Aligned_cols=88 Identities=20% Similarity=0.321 Sum_probs=54.3
Q ss_pred echHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHH----------------HHHHHHHHHHHcCCceeecccchH
Q 007552 79 FSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDA----------------QRQATKDAGIIAGLNVARIINEPT 142 (599)
Q Consensus 79 ~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~----------------qr~~l~~Aa~~AGl~~~~li~Ep~ 142 (599)
.+|+++...+.+.+.+... ..++..+.|++|...+.. -++.+.+. .|++ +.+.|+..
T Consensus 35 ~~~~~~~~~i~~~i~~~~~---~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~---~~~p-v~v~NDa~ 107 (321)
T 3vgl_A 35 PTAEGIVDAICAAVAGASE---GHDVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQR---VGLP-VVVENDAN 107 (321)
T ss_dssp SSHHHHHHHHHHHHHHHHT---TCCEEEEEEEESSEECTTSSCEEECSSSCCEEECHHHHHHHH---HCSC-EEEEEHHH
T ss_pred CCHHHHHHHHHHHHHHHHh---hcCceEEEEeccccEeCCCCEEEeCCCCCCcCCCHHHHHhhh---hCCC-EEEEehhh
Confidence 3566766666655554432 235777888988765432 13344433 3775 68999999
Q ss_pred HHHHHhccccC-CCccEEEEEEcCCCEEEEEEE
Q 007552 143 AAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 174 (599)
Q Consensus 143 Aaal~y~~~~~-~~~~~vlVvD~Gggt~dvsv~ 174 (599)
|+|++...... ....+++++-+|.| .-..++
T Consensus 108 aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 108 AAAWGEYRFGAGQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEE
Confidence 99987533222 13456888888888 455554
No 69
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=88.60 E-value=21 Score=35.57 Aligned_cols=84 Identities=6% Similarity=-0.054 Sum_probs=54.0
Q ss_pred chHHHHHHHHHHHHHHHHHHh--CC-CcccEEEEeCCCCCHHHHHHHHHHHHHc-C--CceeecccchHHHHHHhccccC
Q 007552 80 SPEEISAMILTKMKETAEAFL--GK-KIKDAVVTVPAYFNDAQRQATKDAGIIA-G--LNVARIINEPTAAAIAYGLDKK 153 (599)
Q Consensus 80 s~e~v~a~~L~~l~~~a~~~~--~~-~~~~~VitVPa~~~~~qr~~l~~Aa~~A-G--l~~~~li~Ep~Aaal~y~~~~~ 153 (599)
+++++...+...+.+...... .. .+..+.|++|...+......+.+..+.. | .-.+.+.|+..|||+++ . .
T Consensus 44 ~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~--~ 120 (347)
T 2ch5_A 44 GTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T--P 120 (347)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C--S
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C--C
Confidence 566677666666665554431 12 5778999999999877666666665543 3 13568999999999884 2 1
Q ss_pred CCccEEEEEEcCCCEE
Q 007552 154 GGEKNILVFDLGGGTF 169 (599)
Q Consensus 154 ~~~~~vlVvD~Gggt~ 169 (599)
...+++=+|.|.-
T Consensus 121 ---~~~v~v~~GTGig 133 (347)
T 2ch5_A 121 ---DGGVVLISGTGSN 133 (347)
T ss_dssp ---SCEEEEEESSSEE
T ss_pred ---CCcEEEEEcCCce
Confidence 2345555566653
No 70
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=88.45 E-value=16 Score=37.15 Aligned_cols=89 Identities=16% Similarity=0.238 Sum_probs=53.7
Q ss_pred chHHHHHHHHHHHHHHHHHHh--CCCcccEEEEeCCCCCHH----------------HHHHHHHHHHHcCCceeecccch
Q 007552 80 SPEEISAMILTKMKETAEAFL--GKKIKDAVVTVPAYFNDA----------------QRQATKDAGIIAGLNVARIINEP 141 (599)
Q Consensus 80 s~e~v~a~~L~~l~~~a~~~~--~~~~~~~VitVPa~~~~~----------------qr~~l~~Aa~~AGl~~~~li~Ep 141 (599)
++++++..+...+.+.....- ...+..+.|++|...+.. -++.+.+. .|++ +.+.|+.
T Consensus 123 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~---~~~p-V~v~NDa 198 (380)
T 2hoe_A 123 DREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEK---YGIE-VWVENDA 198 (380)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHH---HCSE-EEEEEHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEeeccEECCCCEEeccCCCCCcCCChHHHHHHH---hCCC-EEEechH
Confidence 577777777666665544331 245677889998854321 12333333 3665 6899999
Q ss_pred HHHHHHhccccCCCccEEEEEEcCCCEEEEEEE
Q 007552 142 TAAAIAYGLDKKGGEKNILVFDLGGGTFDVSIL 174 (599)
Q Consensus 142 ~Aaal~y~~~~~~~~~~vlVvD~Gggt~dvsv~ 174 (599)
.|||++........ ..++++-+|.|- -..++
T Consensus 199 naaalaE~~~g~~~-~~~v~l~~GtGi-G~giv 229 (380)
T 2hoe_A 199 DMGAVGEKWYTKRD-DSFAWILTGKGI-GAGII 229 (380)
T ss_dssp HHHHHHHHHHTTCC-SCEEEEEESSSC-EEEEE
T ss_pred HHHHHHHHHhCCCC-CcEEEEEeCCce-EEEEE
Confidence 99998753322222 577888888773 34444
No 71
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=88.00 E-value=11 Score=40.43 Aligned_cols=207 Identities=15% Similarity=0.161 Sum_probs=98.1
Q ss_pred echHHHHHHHHHHHHHHHHHHhC----CCcccEEEEe-CCCCCHHHHHHHHH---HHHHcCCceeecccchHHHHHHhcc
Q 007552 79 FSPEEISAMILTKMKETAEAFLG----KKIKDAVVTV-PAYFNDAQRQATKD---AGIIAGLNVARIINEPTAAAIAYGL 150 (599)
Q Consensus 79 ~s~e~v~a~~L~~l~~~a~~~~~----~~~~~~VitV-Pa~~~~~qr~~l~~---Aa~~AGl~~~~li~Ep~Aaal~y~~ 150 (599)
+-|+.....-.+.|....+..+. ..++.+++|. |..|+.-. --+-- -|...|.+.+. |+.-.|=+++...
T Consensus 44 ~~p~~a~~~h~~~l~~~i~~~l~~~~~~~id~ia~~~gPG~~~~l~-vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~ 121 (540)
T 3en9_A 44 INPREAADHHAETFPKLIKEAFEVVDKNEIDLIAFSQGPGLGPSLR-VTATVARTLSLTLKKPIIG-VNHCIAHIEIGKL 121 (540)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHHSCGGGCCEEEEEEESSCHHHHH-HHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCHhHCcEEEEecCCCchhhHH-HHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHH
Confidence 34455444444444433333332 2466676766 77666442 22222 23344666544 4444443332222
Q ss_pred ccCCCccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHH
Q 007552 151 DKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRRE 230 (599)
Q Consensus 151 ~~~~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 230 (599)
....... +++-+.||+|.+..+ ..+.+++++..-+ .--|+.||.. .+..|......+ .+.+|
T Consensus 122 ~~~~~~p--~~l~vsGg~t~~~~~--~~~~~~~lg~t~d-~s~G~~~D~~---------a~~lgl~~~gg~-~ie~l--- 183 (540)
T 3en9_A 122 TTEAEDP--LTLYVSGGNTQVIAY--VSKKYRVFGETLD-IAVGNCLDQF---------ARYVNLPHPGGP-YIEEL--- 183 (540)
T ss_dssp HSSCSSC--EEEEECSSCEEEEEE--ETTEEEEEEEBSS-SCHHHHHHHH---------HHHTTCCSSCHH-HHHHH---
T ss_pred hcCCCCC--cEEEEcCCCcEEEEE--eCCceEEEeeccc-hHhHHHHHHH---------HHHcCCCCCCHH-HHHHH---
Confidence 2222122 555566777766544 4688888887664 3346666632 222233322222 22222
Q ss_pred HHHHHHHccCCcceEEEEecccCCccceee-------------cCHHHHHHHHH-HHHHHHHHHHHHHHHHhCCCccCCC
Q 007552 231 AERAKRALSSQHQVRVEIESLFDGIDFSEP-------------LTRARFEELNN-DLFRKTMGPVKKAMEDAGLEKNQID 296 (599)
Q Consensus 231 ~e~~K~~Ls~~~~~~i~i~~l~~~~~~~~~-------------itr~~fe~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~ 296 (599)
|...+.. +.++....+.++++. .+..++-..++ -+++.+.+.+.++++..+ ++
T Consensus 184 A~~g~~~--------~~~p~~~~~~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~ 250 (540)
T 3en9_A 184 ARKGKKL--------VDLPYTVKGMDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KG 250 (540)
T ss_dssp HHTCCCC--------CCCCCCEETTEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CS
T ss_pred HHcCCcc--------CcCCCCCCCcceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CC
Confidence 2221100 111111111222111 11222222111 233444455556666544 57
Q ss_pred eEEEecCCCCcHHHHHHHHhHc
Q 007552 297 EIVLVGGSTRIPKVQQLLKDYF 318 (599)
Q Consensus 297 ~ViLvGG~srip~v~~~l~~~f 318 (599)
.|+|+||.+....+++.+.+.+
T Consensus 251 ~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 251 EVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp EEEEESGGGGCHHHHHHHHHHH
T ss_pred eEEEeCcHHhHHHHHHHHHHHH
Confidence 8999999999999999999876
No 72
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=87.72 E-value=0.98 Score=45.83 Aligned_cols=115 Identities=19% Similarity=0.198 Sum_probs=63.4
Q ss_pred EechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHH------HHHHHHHHHHcCCceeecccchHHHHHHh-cc
Q 007552 78 VFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQ------RQATKDAGIIAGLNVARIINEPTAAAIAY-GL 150 (599)
Q Consensus 78 ~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~q------r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~ 150 (599)
.+++ +.+...+..|+...+..-...+..+. .| -|..- ...+..+-+..|+++ .+|+-.+=|.+.| +.
T Consensus 62 ~ls~-eai~r~~~aL~~f~~~~~~~~v~~v~-~v---ATsA~R~A~N~~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv 135 (343)
T 3cer_A 62 RFAD-EALERAYVAAREFAGVIAEHPIDGLR-FV---ATSATRDAENREEFEDEIERILGVRP-EVIPGTEEADLSFLGA 135 (343)
T ss_dssp SCCH-HHHHHHHHHHHHHHHHHTTSCCSEEE-EE---ECHHHHHCTTHHHHHHHHHHHHSSCC-EECCHHHHHHHHHHHH
T ss_pred CcCH-HHHHHHHHHHHHHHHHHHHCCCCeEE-EE---ecHHHHcCcCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHH
Confidence 3444 44566666666665554343444332 22 23322 334445555679986 5555555444444 33
Q ss_pred ccCC----CccEEEEEEcCCCEEEEEEEEE--eC--CeEEEEEecCCCCCccchHhHHH
Q 007552 151 DKKG----GEKNILVFDLGGGTFDVSILTI--DN--GVFEVLSTNGDTHLGGEDFDQRV 201 (599)
Q Consensus 151 ~~~~----~~~~vlVvD~Gggt~dvsv~~~--~~--~~~~v~~~~~~~~lGG~~iD~~l 201 (599)
.... ....++|+|+|||+|.++++.- .. +.+ . .....++|+..+.+.+
T Consensus 136 ~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~-~~~SlplG~v~lt~~~ 191 (343)
T 3cer_A 136 TSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--Q-GAFSMNIGSVRMTERH 191 (343)
T ss_dssp HSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--S-EEEEESCCHHHHHHHT
T ss_pred HhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc--c-eeEEEehhHHHHHHHh
Confidence 2211 2356999999999999999753 21 111 0 1223579998887765
No 73
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=87.00 E-value=18 Score=35.86 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=50.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHH----------------HHHHHHHHHHcCCceeecccchHH
Q 007552 80 SPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQ----------------RQATKDAGIIAGLNVARIINEPTA 143 (599)
Q Consensus 80 s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~q----------------r~~l~~Aa~~AGl~~~~li~Ep~A 143 (599)
+++++...+.+.+.+..... + .+..+.|++|...+... ++.+.+. .|++ +.+.|+..|
T Consensus 59 ~~~~~~~~i~~~i~~~~~~~-~-~i~~igi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~---~~~p-v~v~NDa~a 132 (327)
T 2ap1_A 59 SYSAFLDAVCELVEEADQRF-G-VKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSAR---LDRD-VRLDNDANC 132 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-T-SCCEEEEEESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHH---HTSC-EEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhc-C-CccEEEEEeeeeEECCCCEEEccCCCccCCCChHHHHHHH---HCCC-EEEecHHHH
Confidence 45666655555554443322 2 35668899988654321 2233332 3665 689999999
Q ss_pred HHHHhccccC-CCccEEEEEEcCCCEEEEEEE
Q 007552 144 AAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 174 (599)
Q Consensus 144 aal~y~~~~~-~~~~~vlVvD~Gggt~dvsv~ 174 (599)
+|++...... .....++++-+|.| .-.+++
T Consensus 133 aalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 133 FALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 9986432211 12457788888887 334444
No 74
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=86.22 E-value=1.5 Score=47.01 Aligned_cols=115 Identities=15% Similarity=0.173 Sum_probs=60.5
Q ss_pred EechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCC---HHHHHHHHHHHHHcCCceeecccch-HHHHHHhccccC
Q 007552 78 VFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFN---DAQRQATKDAGIIAGLNVARIINEP-TAAAIAYGLDKK 153 (599)
Q Consensus 78 ~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~---~~qr~~l~~Aa~~AGl~~~~li~Ep-~Aaal~y~~~~~ 153 (599)
.++++- ....+..|+...+..-+-.+.++ ..|=..-- ......+..+-+..|+++ .+|+-. +|...+.+....
T Consensus 60 ~Ls~ea-i~r~~~~L~~F~~~~~~~~v~~v-~~vATsA~R~A~N~~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~ 136 (508)
T 3hi0_A 60 RMHEEG-VTRALMALRRFHVLSEQAQAQKL-YVLATAAAREAENGPDFIREAEAILGCEI-EVLSGEKEALYSAYGVISG 136 (508)
T ss_dssp SCCHHH-HHHHHHHHHHHHHHHHHTTCSEE-EEEECTHHHHSTTHHHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHH
T ss_pred CcCHHH-HHHHHHHHHHHHHHHHhCCCCeE-EEEeeHHHHcCcCHHHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhc
Confidence 455543 34555555554443323334433 22221111 122344555555679987 455544 444433343332
Q ss_pred CCccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHH
Q 007552 154 GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQR 200 (599)
Q Consensus 154 ~~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~ 200 (599)
......+|+|+|||+|.+++++ ++.+. .....++|...+.+.
T Consensus 137 ~~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 137 FYQPDGIAGDLGGGSLELIDIK--DKSCG---EGITLPLGGLRLSEQ 178 (508)
T ss_dssp SSSCEEEEEEECSSCEEEEEEE--TTEEC---CCEEESCCHHHHHHH
T ss_pred CCCCCeEEEEeCCCceEEEEee--CCeee---eEEEecceEEehhhc
Confidence 2233459999999999999986 33321 122357888877653
No 75
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=84.48 E-value=2.4 Score=45.52 Aligned_cols=113 Identities=22% Similarity=0.240 Sum_probs=64.0
Q ss_pred EechHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHH------HHHHHHHHHcCCceeecccchHHHHHHh-cc
Q 007552 78 VFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQR------QATKDAGIIAGLNVARIINEPTAAAIAY-GL 150 (599)
Q Consensus 78 ~~s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr------~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~ 150 (599)
.+++ +.....+..|+...+..-+..+.++.+ | -|..-| ..+..+-+..|+++ .+|+-.+=|.+.| +.
T Consensus 56 ~Ls~-eai~r~~~~L~~f~~~~~~~~v~~v~~-v---ATsA~R~A~N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv 129 (513)
T 1u6z_A 56 MLSE-EAMTRGLNCLSLFAERLQGFSPASVCI-V---GTHTLRQALNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGV 129 (513)
T ss_dssp CBCH-HHHHHHHHHHHHHHHHTTTCCGGGEEE-E---ECHHHHHCTTHHHHHHHHTTTCSSCE-EECCHHHHHHHHHHHH
T ss_pred CcCH-HHHHHHHHHHHHHHHHHHhCCCCEEEE-E---ecHHHHcCcCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHH
Confidence 4554 445666666666665544444554332 2 233333 33344444568886 5565555444444 33
Q ss_pred ccCC-CccEEEEEEcCCCEEEEEEEEEeCCeEEEEEecCCCCCccchHhHHH
Q 007552 151 DKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRV 201 (599)
Q Consensus 151 ~~~~-~~~~vlVvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~iD~~l 201 (599)
.... .....+|+|+|||+|.+++++ ++.+.. ....++|...+.+.+
T Consensus 130 ~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 130 EHTQPEKGRKLVIDIGGGSTELVIGE--NFEPIL---VESRRMGCVSFAQLY 176 (513)
T ss_dssp HHHSCCCSCEEEEEECSSCEEEEEEE--TTEEEE---EEEESCCHHHHHHHH
T ss_pred HhhccCCCCEEEEEECCCcEEEEEEe--CCeeeE---EEEEeccHHHHHHHH
Confidence 2222 122689999999999999874 444321 223689998887665
No 76
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=84.36 E-value=33 Score=33.68 Aligned_cols=90 Identities=13% Similarity=0.249 Sum_probs=52.8
Q ss_pred chHHHHHHHHHHHHHHHHHHh--CCCcccEEEEeCCCCCH-----------------HHHHHHHHHHHHcCCceeecccc
Q 007552 80 SPEEISAMILTKMKETAEAFL--GKKIKDAVVTVPAYFND-----------------AQRQATKDAGIIAGLNVARIINE 140 (599)
Q Consensus 80 s~e~v~a~~L~~l~~~a~~~~--~~~~~~~VitVPa~~~~-----------------~qr~~l~~Aa~~AGl~~~~li~E 140 (599)
++++++..+...+.+.....- ..++..+.|++|...+. .-++.+.+. .|++ +.+.|+
T Consensus 42 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~---~~~p-v~v~ND 117 (326)
T 2qm1_A 42 DGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESA---LGIP-FALDND 117 (326)
T ss_dssp TTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHH---HCSC-EEEEEH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCccceeEEEEecccceeCCCCEEEecCCCCccCCchHHHHHHHH---hCCC-EEEecH
Confidence 466676666666555544321 12355677888875321 113334333 3665 678999
Q ss_pred hHHHHHHhccccC-CCccEEEEEEcCCCEEEEEEE
Q 007552 141 PTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 174 (599)
Q Consensus 141 p~Aaal~y~~~~~-~~~~~vlVvD~Gggt~dvsv~ 174 (599)
..|+|++...... .....++++-+|.| .-..++
T Consensus 118 ~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 118 ANVAALGERWKGAGENNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 9999986432221 13457788888988 445554
No 77
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=83.75 E-value=35 Score=34.86 Aligned_cols=90 Identities=11% Similarity=0.201 Sum_probs=50.9
Q ss_pred chHHHHHHHHHHHHHHHHHHh--CCCcccEEEEeCCC----------------CCH-HHHHHHHHHHHHcCCceeecccc
Q 007552 80 SPEEISAMILTKMKETAEAFL--GKKIKDAVVTVPAY----------------FND-AQRQATKDAGIIAGLNVARIINE 140 (599)
Q Consensus 80 s~e~v~a~~L~~l~~~a~~~~--~~~~~~~VitVPa~----------------~~~-~qr~~l~~Aa~~AGl~~~~li~E 140 (599)
++++++..+...+.+.....- ...+..+.|++|.. |.. .-++.+.+. .|++ +.+.|+
T Consensus 120 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~---~~~p-v~v~ND 195 (406)
T 1z6r_A 120 DDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQH---TGVP-VYIQHD 195 (406)
T ss_dssp CSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHH---HSSC-EEEEEH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEeecCEeCCCCEEecCCCCCCccCCCHHHHHHHH---HCCC-EEEech
Confidence 456666666655555444321 13455566777653 432 123344433 3665 678999
Q ss_pred hHHHHHHhccccC-CCccEEEEEEcCCCEEEEEEE
Q 007552 141 PTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 174 (599)
Q Consensus 141 p~Aaal~y~~~~~-~~~~~vlVvD~Gggt~dvsv~ 174 (599)
..|+|++...... .....++++-+|.| .-.+++
T Consensus 196 a~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 196 ISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 9999987432221 13456788888887 444544
No 78
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=81.84 E-value=50 Score=35.56 Aligned_cols=80 Identities=15% Similarity=0.139 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCC-CCCCchhhhchHHHh
Q 007552 263 RARFEELNNDLF-RKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNK-GVNPDEAVAYGAAVQ 340 (599)
Q Consensus 263 r~~fe~~~~~~~-~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~-~~~p~~aVA~GAa~~ 340 (599)
..++-..++..+ +-+.+.+..+.+.. .++.|+|.||.+....+++.|.+..+-..+.. +...|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~t-----g~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLART-----GERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 344444343333 33345555555554 46789999999999999999987652213222 234589999999999
Q ss_pred hhhhcCC
Q 007552 341 GGILSGE 347 (599)
Q Consensus 341 a~~ls~~ 347 (599)
+....+.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 8766544
No 79
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=81.46 E-value=3.1 Score=42.26 Aligned_cols=72 Identities=14% Similarity=0.189 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCC----CCCCchhhhchHHHhhhh
Q 007552 269 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNK----GVNPDEAVAYGAAVQGGI 343 (599)
Q Consensus 269 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~----~~~p~~aVA~GAa~~a~~ 343 (599)
+..-+.+=+...|-+.++... ..++.|+++||+++.|.|.++|++.+++.++.. .++|+.-=|..-|++|..
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 333333444444555555432 246789999999999999999999996554432 234554334446666654
No 80
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=77.04 E-value=71 Score=32.87 Aligned_cols=90 Identities=20% Similarity=0.302 Sum_probs=51.5
Q ss_pred chHHHHHHHHHHHHHHHHHHh--CCCcccEEEEeCCCCCH----------------HHHHHHHHHHHHcCCceeecccch
Q 007552 80 SPEEISAMILTKMKETAEAFL--GKKIKDAVVTVPAYFND----------------AQRQATKDAGIIAGLNVARIINEP 141 (599)
Q Consensus 80 s~e~v~a~~L~~l~~~a~~~~--~~~~~~~VitVPa~~~~----------------~qr~~l~~Aa~~AGl~~~~li~Ep 141 (599)
++++++..+...+.+.....- ...+..+.|++|...+. .-++.+.+. .|++ +.+.|+.
T Consensus 143 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~---~~~p-V~v~NDa 218 (429)
T 1z05_A 143 DQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKA---TGLP-VFVANDT 218 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTTEEEECSSSBCSSBCHHHHHHHH---HCSC-EEEEEHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHHH---hCCC-EEEechh
Confidence 467777666666655544321 12355667777764321 112334333 3665 6899999
Q ss_pred HHHHHHhccccC-CCccEEEEEEcCCCEEEEEEE
Q 007552 142 TAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 174 (599)
Q Consensus 142 ~Aaal~y~~~~~-~~~~~vlVvD~Gggt~dvsv~ 174 (599)
.|||++...... .....++++-+|.| .-.+++
T Consensus 219 ~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 219 RAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence 999987533221 13456788888887 344444
No 81
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=75.31 E-value=4.8 Score=44.27 Aligned_cols=50 Identities=18% Similarity=0.181 Sum_probs=39.3
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcCCCCCCC---CCCCchhhhchHHHhhhh
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNK---GVNPDEAVAYGAAVQGGI 343 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~---~~~p~~aVA~GAa~~a~~ 343 (599)
.++.|+|+||.+...++++.|.+.+.+.++.. ..--|-++|+|.|+.|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 46789999999999999999999874333322 233489999999998854
No 82
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=73.97 E-value=5.4 Score=40.51 Aligned_cols=70 Identities=21% Similarity=0.305 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCC----CCCCc--hhhhchHHHhh
Q 007552 268 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNK----GVNPD--EAVAYGAAVQG 341 (599)
Q Consensus 268 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~----~~~p~--~aVA~GAa~~a 341 (599)
++..-+.+=+...|-+.+.... .++.|+++||+++.|.+.++|++.+++.++.. .++|+ ||+| -|++|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~a--FA~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIA--FAWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHH--HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHH--HHHHH
Confidence 4444444444555556665432 35689999999999999999999996644422 23444 5555 45666
Q ss_pred hh
Q 007552 342 GI 343 (599)
Q Consensus 342 ~~ 343 (599)
..
T Consensus 341 ~~ 342 (370)
T 3cqy_A 341 MR 342 (370)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 83
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=72.71 E-value=3.8 Score=45.95 Aligned_cols=52 Identities=25% Similarity=0.282 Sum_probs=39.6
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcC--CCCCCC---CCCCchhhhchHHHhhhhhc
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFD--GKEPNK---GVNPDEAVAYGAAVQGGILS 345 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~--~~~i~~---~~~p~~aVA~GAa~~a~~ls 345 (599)
.++.|+|+||.+....+++.|.+.+. +.++.. ..--|-++|+|.|++|+...
T Consensus 693 g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 693 GINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp CCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 36789999999999999999998872 333322 22348999999999887544
No 84
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=70.90 E-value=8.8 Score=43.17 Aligned_cols=61 Identities=16% Similarity=0.312 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcC--CCCCCCCC---CCchhhhchHHHhhhh
Q 007552 278 MGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFD--GKEPNKGV---NPDEAVAYGAAVQGGI 343 (599)
Q Consensus 278 ~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~--~~~i~~~~---~p~~aVA~GAa~~a~~ 343 (599)
.+.+.++.++ ..++.|+|.||......+++.+.+.+. +.++..+. --|..+|+|+|++|+.
T Consensus 694 ~~~~~~a~~~-----tg~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~ 759 (772)
T 4g9i_A 694 AHTAVERARE-----FGVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGL 759 (772)
T ss_dssp HHHHHHHHHT-----TTCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----hCcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHH
Confidence 3444444444 346789999999999999999999873 33444332 2389999999988865
No 85
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=68.43 E-value=6.9 Score=39.66 Aligned_cols=44 Identities=23% Similarity=0.346 Sum_probs=28.2
Q ss_pred CCceeecccchHHHHHHh-----ccccC--CCccEEEEEEcCCCEEEEEEEE
Q 007552 131 GLNVARIINEPTAAAIAY-----GLDKK--GGEKNILVFDLGGGTFDVSILT 175 (599)
Q Consensus 131 Gl~~~~li~Ep~Aaal~y-----~~~~~--~~~~~vlVvD~Gggt~dvsv~~ 175 (599)
|+. +++|+-.+=|.+.| .+..- ..+++++|+|+|||+|.++...
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 554 46666555444433 33321 1234699999999999999873
No 86
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=66.40 E-value=14 Score=35.94 Aligned_cols=50 Identities=22% Similarity=0.124 Sum_probs=32.7
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcC-----------CCCCCCCCCCchhhhchHHHhhhh
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFD-----------GKEPNKGVNPDEAVAYGAAVQGGI 343 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~-----------~~~i~~~~~p~~aVA~GAa~~a~~ 343 (599)
+++.|+|.||.+..|.+.+.+++.+. ..++....-.+.+.++||+.++..
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 45789999998877777666665441 122333334567899999988753
No 87
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=59.17 E-value=17 Score=35.58 Aligned_cols=50 Identities=20% Similarity=0.133 Sum_probs=36.2
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcCCC-----CCCCCCCCchhhhchHHHhhhh
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFDGK-----EPNKGVNPDEAVAYGAAVQGGI 343 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~~~-----~i~~~~~p~~aVA~GAa~~a~~ 343 (599)
+++.|+|.||.+..|.+.+.|++.+... ++....-.+.+.++||+.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 4678999999998888888888877321 2223334568999999988754
No 88
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=58.83 E-value=6.1 Score=39.45 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=26.2
Q ss_pred eecccchHHHHHHhccccCCCccEEEEEEcCCCEEEEEEEE
Q 007552 135 ARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILT 175 (599)
Q Consensus 135 ~~li~Ep~Aaal~y~~~~~~~~~~vlVvD~Gggt~dvsv~~ 175 (599)
.....-|.|.|...+.. . ....+++|+||.|||+..+.
T Consensus 108 ~~aaanw~ASa~~~A~~-~--~~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 108 KVSASNWCGTAKWVSKN-I--EENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp GTBCCSSHHHHHHHHHH-T--CSSEEEEEECSSCEEEEEEE
T ss_pred HHHhcCHHHHHHHHHHh-c--CCCEEEEEcCcchhhhhhhc
Confidence 33456677777633333 1 12479999999999999887
No 89
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=55.70 E-value=14 Score=35.77 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=33.4
Q ss_pred CCCeEEEecCCCCcHHHHHHHHhHcCCC------CCCCCCCCchhhhchHHHhh
Q 007552 294 QIDEIVLVGGSTRIPKVQQLLKDYFDGK------EPNKGVNPDEAVAYGAAVQG 341 (599)
Q Consensus 294 ~i~~ViLvGG~srip~v~~~l~~~f~~~------~i~~~~~p~~aVA~GAa~~a 341 (599)
+++.|+|.||.+..|.+.+.+++.+... ++....-.+.+.++|||.++
T Consensus 233 ~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 233 DCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 4567999998887788888888777322 12222345678999999876
No 90
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=53.98 E-value=1.7e+02 Score=30.03 Aligned_cols=26 Identities=23% Similarity=0.474 Sum_probs=24.3
Q ss_pred cCCCeEEEecCCC-CcHHHHHHHHhHc
Q 007552 293 NQIDEIVLVGGST-RIPKVQQLLKDYF 318 (599)
Q Consensus 293 ~~i~~ViLvGG~s-rip~v~~~l~~~f 318 (599)
..+|.|+++||-+ ..+.||+.+.+.+
T Consensus 329 ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 329 HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred CCCCEEEECccccccCHHHHHHHHhhH
Confidence 5799999999999 9999999999877
No 91
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=53.51 E-value=1.7e+02 Score=28.62 Aligned_cols=71 Identities=24% Similarity=0.264 Sum_probs=43.4
Q ss_pred CCCcccEEEEeCCCCCH-----------HHHHHHHHHHHHcCCceeecccchHHHHHHhccc---------c--CCCccE
Q 007552 101 GKKIKDAVVTVPAYFND-----------AQRQATKDAGIIAGLNVARIINEPTAAAIAYGLD---------K--KGGEKN 158 (599)
Q Consensus 101 ~~~~~~~VitVPa~~~~-----------~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~---------~--~~~~~~ 158 (599)
+..+..+.|++|..-+. ..++.+. +..|++.+.+.|+-.|+|++-... . ......
T Consensus 64 ~~~i~gigi~~pG~vd~~~~~~~nl~w~~~~~~l~---~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~ 140 (332)
T 1sz2_A 64 KVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMK---KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKP 140 (332)
T ss_dssp CCCCCEEEEEESSCCCSSEECCSSSCCCEEHHHHH---HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCC
T ss_pred CCCccEEEEEEeCceeCCEEeeeCCCCcCCHHHHH---HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCc
Confidence 34567788888874321 1133333 335887679999999999865432 0 112456
Q ss_pred EEEEEcCCCEEEEEEEE
Q 007552 159 ILVFDLGGGTFDVSILT 175 (599)
Q Consensus 159 vlVvD~Gggt~dvsv~~ 175 (599)
++++-+|.|- -..++.
T Consensus 141 ~~~v~~GTGi-G~giv~ 156 (332)
T 1sz2_A 141 IAVYGAGTGL-GVAHLV 156 (332)
T ss_dssp EEEEEESSSE-EEEEEE
T ss_pred EEEEEcCccc-eEEEEe
Confidence 7888888874 344443
No 92
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=53.09 E-value=12 Score=36.86 Aligned_cols=64 Identities=14% Similarity=0.082 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCC--cHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhh
Q 007552 269 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTR--IPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGG 342 (599)
Q Consensus 269 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr--ip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~ 342 (599)
.+..++++....+-..+...-. . +++.|+|.||.+. .|.+.+.+++.+ . .|+.+.+.||+++|.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 3445566666666666555432 2 6788999999864 577777777754 1 256788999999874
No 93
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=53.05 E-value=23 Score=37.17 Aligned_cols=43 Identities=21% Similarity=0.333 Sum_probs=28.6
Q ss_pred ceeecccchHHHHHHh-----ccccC-----------CCccEEEEEEcCCCEEEEEEEE
Q 007552 133 NVARIINEPTAAAIAY-----GLDKK-----------GGEKNILVFDLGGGTFDVSILT 175 (599)
Q Consensus 133 ~~~~li~Ep~Aaal~y-----~~~~~-----------~~~~~vlVvD~Gggt~dvsv~~ 175 (599)
..+++|+-.+=|.+.| .+... .....++|+|+|||+|.++...
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 3567887666555544 33211 1135689999999999999874
No 94
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=49.39 E-value=48 Score=34.63 Aligned_cols=95 Identities=17% Similarity=0.218 Sum_probs=52.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhC---CCcccEEEEeCCCCC------HHHHHHHHHHHHHc----CC--ceeecccchHHH
Q 007552 80 SPEEISAMILTKMKETAEAFLG---KKIKDAVVTVPAYFN------DAQRQATKDAGIIA----GL--NVARIINEPTAA 144 (599)
Q Consensus 80 s~e~v~a~~L~~l~~~a~~~~~---~~~~~~VitVPa~~~------~~qr~~l~~Aa~~A----Gl--~~~~li~Ep~Aa 144 (599)
.|+.+. ..|+.|.+.|..... ...+.+.+---|..- ..+++.+.++++.. ++ ..+++|+-.+=+
T Consensus 83 ~p~~~~-~~l~~Ll~~a~~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg 161 (452)
T 3zx3_A 83 KTDEIA-AYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEG 161 (452)
T ss_dssp CGGGHH-HHHHHHHHHHHHHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHH
T ss_pred CHHHHH-HHHHHHHHHHHHhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhh
Confidence 466654 678888888875422 122344444434331 12334444444322 44 346778765554
Q ss_pred HHH-----hccccCC--CccEEEEEEcCCCEEEEEEEE
Q 007552 145 AIA-----YGLDKKG--GEKNILVFDLGGGTFDVSILT 175 (599)
Q Consensus 145 al~-----y~~~~~~--~~~~vlVvD~Gggt~dvsv~~ 175 (599)
.++ |.+..-. ....+.++|+|||+|.++...
T Consensus 162 ~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 162 AYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp HHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred hhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 443 3333211 235688999999999998764
No 95
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=49.32 E-value=74 Score=25.95 Aligned_cols=52 Identities=17% Similarity=0.191 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 007552 529 SDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 584 (599)
Q Consensus 529 ~~e~~~i~~~l~e~~~WL~~~~~~t~~~~~~kl~~L~~~~~~i~~r~~e~~~~~~~ 584 (599)
...+..+...|++-.+-+.. ..+.++.++..++.-...+...+++..+++||
T Consensus 65 ~~~~~ea~~~L~~~~e~ie~----~i~~le~~~~~l~~~l~~lk~~l~~~~~~~~~ 116 (117)
T 2zqm_A 65 KTTKDKAVAELKEKIETLEV----RLNALERQEKKLNEKLKELTAQIQSALRPPTA 116 (117)
T ss_dssp EECHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--
T ss_pred hccHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 34566677777777777765 47788999999999999999999998877654
No 96
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=47.22 E-value=11 Score=36.74 Aligned_cols=67 Identities=9% Similarity=-0.087 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcc-CCCeEEEecCCCCc--HHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhhh
Q 007552 269 LNNDLFRKTMGPVKKAMEDAGLEKN-QIDEIVLVGGSTRI--PKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGI 343 (599)
Q Consensus 269 ~~~~~~~~i~~~i~~~l~~~~~~~~-~i~~ViLvGG~sri--p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ 343 (599)
.+..++++....+-..+ . +..- +++.|+|.||.+.. |.+++.+++.. .++ ..|..+...||+.+|..
T Consensus 211 ~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~--~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRG--LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTT--CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcC--Cee---cccCcCHHHHHHHHHHh
Confidence 44455555555555555 2 2222 57789999998876 66777776643 122 23668999999999854
No 97
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=45.93 E-value=41 Score=33.05 Aligned_cols=50 Identities=20% Similarity=0.233 Sum_probs=33.3
Q ss_pred cCCCeEEEecCCCCc-----HHHHHHHHhHcCC------CCCCCCCCCchhhhchHHHhhh
Q 007552 293 NQIDEIVLVGGSTRI-----PKVQQLLKDYFDG------KEPNKGVNPDEAVAYGAAVQGG 342 (599)
Q Consensus 293 ~~i~~ViLvGG~sri-----p~v~~~l~~~f~~------~~i~~~~~p~~aVA~GAa~~a~ 342 (599)
-+++.|+|-||.+.. +.+++.+++.+.. .++....-.+.+.++|||.++.
T Consensus 238 ~dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 238 FDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp HCCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred hCCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 356789999998865 4577777776521 1122223356899999998874
No 98
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=45.55 E-value=1.3e+02 Score=24.91 Aligned_cols=14 Identities=7% Similarity=0.370 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHH
Q 007552 556 DYEEKLKEVEAVCN 569 (599)
Q Consensus 556 ~~~~kl~~L~~~~~ 569 (599)
+|..|.++|+.+++
T Consensus 71 eYl~RAE~LK~~l~ 84 (117)
T 2cpt_A 71 EYLDRAEKLKEYLK 84 (117)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 45556666666543
No 99
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=44.75 E-value=38 Score=33.07 Aligned_cols=87 Identities=16% Similarity=0.204 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHH-----------------HHHHHHHHHHHcCCceeecccchHHH
Q 007552 82 EEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDA-----------------QRQATKDAGIIAGLNVARIINEPTAA 144 (599)
Q Consensus 82 e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~-----------------qr~~l~~Aa~~AGl~~~~li~Ep~Aa 144 (599)
+++...+.+.+.+..... ..++..+.|++|...+.. -++.+.+ ..|++ +.+.|+..|+
T Consensus 37 ~~~~~~i~~~i~~~~~~~-~~~i~gigi~~pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~---~~~~p-v~v~NDa~aa 111 (302)
T 3vov_A 37 ERVAEALAEAAERAEREA-GVRGEAIGLGTPGPLDFRRGVIRFAPNIPGVQDFPIRRILEE---ATGRP-VFLENDANAA 111 (302)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCCCSSEEEEESSCEETTTTEEC---CCTTCTTCCHHHHHHH---HHSSC-EEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHhhc-cCCceEEEEEecccEeCCCCEEEcCCCCCCcCCCChHHHHHH---hhCCC-EEEEechHHH
Confidence 455554444444433332 456777888888653321 1233333 23665 5789999999
Q ss_pred HHHhccccC-CCccEEEEEEcCCCEEEEEEE
Q 007552 145 AIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 174 (599)
Q Consensus 145 al~y~~~~~-~~~~~vlVvD~Gggt~dvsv~ 174 (599)
|++-..... ....+++++-+|.| .-..++
T Consensus 112 al~E~~~g~~~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 112 ALAEHHLGAAQGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHhCCCCCCCCEEEEEECCc-eeEEEE
Confidence 986543222 13456788888877 334443
No 100
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=44.22 E-value=15 Score=37.42 Aligned_cols=49 Identities=22% Similarity=0.174 Sum_probs=33.4
Q ss_pred CCCeEEEecCCCCcHH-HHHHHHhHcCCC---CCCCCCCCchhhhchHHHhhh
Q 007552 294 QIDEIVLVGGSTRIPK-VQQLLKDYFDGK---EPNKGVNPDEAVAYGAAVQGG 342 (599)
Q Consensus 294 ~i~~ViLvGG~srip~-v~~~l~~~f~~~---~i~~~~~p~~aVA~GAa~~a~ 342 (599)
+++.|+|.||.+..+. +.+.+++.+... .+........+.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 6789999999987544 788888877322 122222233589999998764
No 101
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=43.79 E-value=69 Score=33.73 Aligned_cols=25 Identities=24% Similarity=0.549 Sum_probs=21.9
Q ss_pred CccEEEEEEcCCCEEEEEEEEEeCC
Q 007552 155 GEKNILVFDLGGGTFDVSILTIDNG 179 (599)
Q Consensus 155 ~~~~vlVvD~Gggt~dvsv~~~~~~ 179 (599)
....+|.+|+||+++-+.++++.+.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESS
T ss_pred cceEEEEEEecCCeEEEEEEEECCC
Confidence 3457999999999999999999765
No 102
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=43.28 E-value=1.5e+02 Score=30.41 Aligned_cols=26 Identities=23% Similarity=0.424 Sum_probs=23.1
Q ss_pred cCCCeEEEecCCC-CcHHHHHHHHhHc
Q 007552 293 NQIDEIVLVGGST-RIPKVQQLLKDYF 318 (599)
Q Consensus 293 ~~i~~ViLvGG~s-rip~v~~~l~~~f 318 (599)
..+|.|+++||-+ ..+.||+.+.+.+
T Consensus 338 G~vDaIVFTgGIGEns~~vR~~v~~~l 364 (415)
T 3sk3_A 338 GRLDAVVFTGGIGENAAMVRELSLGKL 364 (415)
T ss_dssp TCCCEEEEEHHHHTTCHHHHHHHHHTC
T ss_pred CCCCEEEECCccccCCHHHHHHHHhhc
Confidence 3599999999998 7999999998876
No 103
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=40.84 E-value=2.4e+02 Score=28.69 Aligned_cols=26 Identities=19% Similarity=0.275 Sum_probs=22.6
Q ss_pred cCCCeEEEecCCC-CcHHHHHHHHhHc
Q 007552 293 NQIDEIVLVGGST-RIPKVQQLLKDYF 318 (599)
Q Consensus 293 ~~i~~ViLvGG~s-rip~v~~~l~~~f 318 (599)
.++|.|+++||-+ +.+.+++.|.+.+
T Consensus 322 G~vDaIVfTGGIgEns~~vr~~I~~~l 348 (398)
T 4ijn_A 322 GRTDVISFTAGVGENVPPVRRDALAGL 348 (398)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred CCCcEEEECCccccccHHHHHHHHHHH
Confidence 4699999999988 5788999998876
No 104
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=38.79 E-value=1.2e+02 Score=31.60 Aligned_cols=26 Identities=19% Similarity=0.493 Sum_probs=22.5
Q ss_pred CccEEEEEEcCCCEEEEEEEEEeCCe
Q 007552 155 GEKNILVFDLGGGTFDVSILTIDNGV 180 (599)
Q Consensus 155 ~~~~vlVvD~Gggt~dvsv~~~~~~~ 180 (599)
....++.+|+||+++-+.++...+..
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTE
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCe
Confidence 45678999999999999999988765
No 105
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=36.80 E-value=43 Score=32.77 Aligned_cols=48 Identities=15% Similarity=0.145 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHcC
Q 007552 269 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFD 319 (599)
Q Consensus 269 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f~ 319 (599)
+++...+.+...++++|+++++++.+|+.|+.-|+++++ -+.+.+.|+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 344455677788999999999999999999999988664 457888883
No 106
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=36.18 E-value=17 Score=39.74 Aligned_cols=24 Identities=38% Similarity=0.755 Sum_probs=22.2
Q ss_pred CCeEEEecCCCCcHHHHHHHHhHc
Q 007552 295 IDEIVLVGGSTRIPKVQQLLKDYF 318 (599)
Q Consensus 295 i~~ViLvGG~srip~v~~~l~~~f 318 (599)
.+.|++|||+|.+|.+.-.|.+++
T Consensus 501 y~nilivGggski~g~~~~L~dri 524 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRI 524 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHH
Confidence 467999999999999999999988
No 107
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=35.71 E-value=37 Score=34.80 Aligned_cols=71 Identities=21% Similarity=0.327 Sum_probs=50.1
Q ss_pred cccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHH-HHHHhccccCCC------cc------------EEEEEEc
Q 007552 104 IKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTA-AAIAYGLDKKGG------EK------------NILVFDL 164 (599)
Q Consensus 104 ~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~A-aal~y~~~~~~~------~~------------~vlVvD~ 164 (599)
+.++|++.|+. ...---.+..||.++|.+.+.-+--..| ||++||...-.+ +. ..+-+|+
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~VgIDm 238 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQVGIDM 238 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTTBEECC
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCCcCccc
Confidence 56889999983 2222356889999999999988888888 578998765331 11 1255777
Q ss_pred CCCEEEEEEEE
Q 007552 165 GGGTFDVSILT 175 (599)
Q Consensus 165 Gggt~dvsv~~ 175 (599)
=+|-+.+.|+-
T Consensus 239 ~AGPSEilViA 249 (423)
T 4gic_A 239 VAGPSEILVIS 249 (423)
T ss_dssp CCCCCEEEEEE
T ss_pred ccccceEEEEe
Confidence 77777777664
No 108
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=35.49 E-value=6.2 Score=38.65 Aligned_cols=66 Identities=8% Similarity=-0.009 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcc-CCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhh
Q 007552 271 NDLFRKTMGPVKKAMEDAGLEKN-QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGG 342 (599)
Q Consensus 271 ~~~~~~i~~~i~~~l~~~~~~~~-~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~ 342 (599)
..++++....+-..+ . +..- +++.|+|.||.+.. +.+.|++.+.. +......+..+.+.||+++|.
T Consensus 211 ~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~--l~~~l~~~l~~-~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 211 RQLVMNSFIAFFRRN-V--MQYDYKQYPVHFIGSIAYC--YKEILQDAARQ-TGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp THHHHHHHHHHHTTT-G--GGSCTTTSCEEECSHHHHH--THHHHHHHTTT-TTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHH-h--cccCCCCceEEEECcHHHH--HHHHHHHHHhc-CCcEEeecCCCHHHHHHHHHH
Confidence 344444444444444 2 2222 56789999998765 55667766632 111112345788899998874
No 109
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=34.26 E-value=77 Score=30.04 Aligned_cols=45 Identities=13% Similarity=0.143 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCc
Q 007552 262 TRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRI 307 (599)
Q Consensus 262 tr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sri 307 (599)
-++..+.+-..++......|+..+++..-.. .--.|+++||.+.+
T Consensus 179 g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~-~~~~vi~TGG~a~~ 223 (249)
T 3bex_A 179 GKDTEENIRLGVVNGSVYALEGIIGRIKEVY-GDLPVVLTGGQSKI 223 (249)
T ss_dssp BSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEEESTTSGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCChHH
Confidence 3445566666666666555555554321111 12359999999874
No 110
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=33.03 E-value=41 Score=26.32 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=25.3
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 007552 107 AVVTVPAYFNDAQRQATKDAGIIAGLNV 134 (599)
Q Consensus 107 ~VitVPa~~~~~qr~~l~~Aa~~AGl~~ 134 (599)
-.++.|+.++..+|..+.+.|+.-||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 3688899999999999999999999864
No 111
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=31.33 E-value=94 Score=30.67 Aligned_cols=90 Identities=22% Similarity=0.219 Sum_probs=49.6
Q ss_pred chHHHHHHHHHHHHHHHHHHh--CCCcccEEEEeCCC-----------------CCH-HHHHHHHHHHHHcCCceeeccc
Q 007552 80 SPEEISAMILTKMKETAEAFL--GKKIKDAVVTVPAY-----------------FND-AQRQATKDAGIIAGLNVARIIN 139 (599)
Q Consensus 80 s~e~v~a~~L~~l~~~a~~~~--~~~~~~~VitVPa~-----------------~~~-~qr~~l~~Aa~~AGl~~~~li~ 139 (599)
+++++...+.+.+.+...... ...+..+.|++|.. |.. .-++.+.+. .|++ +.+.|
T Consensus 64 ~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~---~~~p-v~v~N 139 (343)
T 2yhw_A 64 TYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDT---LHLP-VWVDN 139 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEESSEEETTTTEEEECCTTSSSCSSEECHHHHHHH---HCSC-EEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhcccccCceEEEEEecccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHH---HCCC-EEEec
Confidence 456666666665555443321 12344555666653 331 113344433 3665 67899
Q ss_pred chHHHHHHhccccC-CCccEEEEEEcCCCEEEEEEE
Q 007552 140 EPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 174 (599)
Q Consensus 140 Ep~Aaal~y~~~~~-~~~~~vlVvD~Gggt~dvsv~ 174 (599)
+..|||++...... .....++++-+|.| .-..++
T Consensus 140 Da~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 140 DGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 99999987533221 12456788888887 344444
No 112
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=30.81 E-value=57 Score=31.93 Aligned_cols=45 Identities=22% Similarity=0.208 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHc
Q 007552 271 NDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 318 (599)
Q Consensus 271 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f 318 (599)
+-....+...++++|+++++++.+|+.|+.-|++.++ -+.+.+.|
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~l 260 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERL 260 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 3445677788999999999999999999999988664 45677777
No 113
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=30.79 E-value=50 Score=33.25 Aligned_cols=67 Identities=16% Similarity=0.150 Sum_probs=35.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccEEEEeCCCCCHHHHH----------HHHHHHHH-cCCceeecccchHHHHHH
Q 007552 80 SPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQ----------ATKDAGII-AGLNVARIINEPTAAAIA 147 (599)
Q Consensus 80 s~e~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~----------~l~~Aa~~-AGl~~~~li~Ep~Aaal~ 147 (599)
+++++...+...+.+..... ...+..+.|++|...+..... .+.+..+. .|+..+.+.|+-.|+|++
T Consensus 67 ~~~~~~~~i~~~i~~~~~~~-~~~i~gigi~~pG~vd~g~v~~~~~~~~~~~~l~~~l~~~~~~~pv~v~NDa~aaalg 144 (373)
T 2q2r_A 67 DITEIIEFFNEIIELMPASV-MKRVKAGVINVPGPVTGGAVGGPFNNLKGIARLSDYPKALFPPGHSAILNDLEAGGFG 144 (373)
T ss_dssp BGGGHHHHHHHHHHHSCHHH-HTTEEEEEEEESSCEETTTEECCCSSSBSCEEGGGSCTTTSCTTSEEEEEHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcc-cccccEEEEEeeccccCCEEeccCCCCCCcCCHHHHHHHhcCCCCEEEEccHhHHhcc
Confidence 45666666555554432221 234556788888764330000 11111111 355457899999999988
No 114
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=30.73 E-value=61 Score=31.38 Aligned_cols=44 Identities=16% Similarity=0.275 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHc
Q 007552 272 DLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 318 (599)
Q Consensus 272 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f 318 (599)
.....+...++++|+++++++.+|+.|++-|+++++ -+.+.+.|
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~l 250 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKL 250 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 345567788999999999999999999999988764 35677777
No 115
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=30.13 E-value=59 Score=31.73 Aligned_cols=43 Identities=19% Similarity=0.223 Sum_probs=27.6
Q ss_pred cCCceeecccchHHHHHHhccccC-CCccEEEEEEcCCCEEEEEEE
Q 007552 130 AGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 174 (599)
Q Consensus 130 AGl~~~~li~Ep~Aaal~y~~~~~-~~~~~vlVvD~Gggt~dvsv~ 174 (599)
.|++ +.+.|+..|+|++-..... ...++++++-+|.| .-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 3776 6899999999986543322 13456788888866 334443
No 116
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=28.74 E-value=1.8e+02 Score=25.19 Aligned_cols=46 Identities=17% Similarity=0.325 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHHH
Q 007552 530 DEKDKIETAVKEALEWLDDN---QSAEKEDYEEKLKEVEAVCNPIITAV 575 (599)
Q Consensus 530 ~e~~~i~~~l~e~~~WL~~~---~~~t~~~~~~kl~~L~~~~~~i~~r~ 575 (599)
++|..+..+|.++....... .....++|+.++..++++...+...+
T Consensus 96 ~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi 144 (152)
T 4fla_A 96 EDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHI 144 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35667777777776655554 13356788888888888777776654
No 117
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=27.12 E-value=1.5e+02 Score=31.00 Aligned_cols=25 Identities=32% Similarity=0.664 Sum_probs=21.4
Q ss_pred CccEEEEEEcCCCEEEEEEEEEeCC
Q 007552 155 GEKNILVFDLGGGTFDVSILTIDNG 179 (599)
Q Consensus 155 ~~~~vlVvD~Gggt~dvsv~~~~~~ 179 (599)
....+|.+|+||+++-|..+++.++
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC-
T ss_pred cceEEEEEEecCceEEEEEEEECCC
Confidence 3457999999999999999999764
No 118
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=25.15 E-value=1.1e+02 Score=33.35 Aligned_cols=47 Identities=17% Similarity=0.208 Sum_probs=0.0
Q ss_pred eecCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCC
Q 007552 259 EPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTR 306 (599)
Q Consensus 259 ~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr 306 (599)
+.||..+++ -+.---..|..-++-.|+.++++..+|+.|+|.||++.
T Consensus 500 i~itq~DIr-~~qlAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~ 546 (631)
T 3zyy_X 500 IVITEADIQ-NLIRAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGK 546 (631)
T ss_dssp EEEEHHHHH-HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCS
T ss_pred EEEeHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccc
No 119
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=24.87 E-value=63 Score=31.81 Aligned_cols=44 Identities=16% Similarity=0.329 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHc
Q 007552 272 DLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 318 (599)
Q Consensus 272 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f 318 (599)
-..+.+...++++|+++++++.+|+.|+.-+++.++ -+.+.+.|
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~l 264 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 345667788999999999999999999999988664 35577777
No 120
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=24.51 E-value=5.6e+02 Score=25.88 Aligned_cols=43 Identities=9% Similarity=-0.011 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCC-cHHHHHHHHhHc
Q 007552 272 DLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTR-IPKVQQLLKDYF 318 (599)
Q Consensus 272 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr-ip~v~~~l~~~f 318 (599)
-++.++...|-...... ..+|.|+++||-+. .+.|++.+.+.+
T Consensus 296 ~f~yri~k~Iga~aa~L----g~vDaIVfTGGIgens~~vR~~i~~~l 339 (391)
T 3r9p_A 296 VFTHRLRKYIGAYLAVL----GHTDVISFTAGIGENDAAVRRDAVSGM 339 (391)
T ss_dssp HHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHh----CCCCEEEECcccccCCHHHHHHHHHHH
Confidence 33444444444333332 36999999999887 699999998876
No 121
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=24.37 E-value=68 Score=31.18 Aligned_cols=46 Identities=17% Similarity=0.188 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHc
Q 007552 270 NNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 318 (599)
Q Consensus 270 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f 318 (599)
.+.....+...++++|+++++++.+|+.|++-++++++ -+.+.+.|
T Consensus 207 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~l 252 (313)
T 1zow_A 207 FKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERL 252 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 33445677788999999999999999999999887654 34567777
No 122
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=23.98 E-value=58 Score=32.20 Aligned_cols=44 Identities=23% Similarity=0.245 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHc
Q 007552 272 DLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 318 (599)
Q Consensus 272 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f 318 (599)
-....+...++++|+++++++.+|+.|+.-|++.++ -+.+.+.|
T Consensus 228 ~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~l 271 (339)
T 1mzj_A 228 WAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHh
Confidence 345667788999999999999999999999888663 34677777
No 123
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=22.89 E-value=1.8e+02 Score=28.07 Aligned_cols=26 Identities=46% Similarity=0.625 Sum_probs=21.3
Q ss_pred cEEEEEEcCCCEEEEEEEEEeCCeEE
Q 007552 157 KNILVFDLGGGTFDVSILTIDNGVFE 182 (599)
Q Consensus 157 ~~vlVvD~Gggt~dvsv~~~~~~~~~ 182 (599)
.+++.+|+|+..+.+.++......+.
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~ 31 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQ 31 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEE
Confidence 47899999999999999987655443
No 124
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=22.69 E-value=1.3e+02 Score=29.69 Aligned_cols=44 Identities=18% Similarity=0.148 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHH
Q 007552 271 NDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLL 314 (599)
Q Consensus 271 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l 314 (599)
+...+.+...|+++|++++++..+||.|...-|-...+.++--+
T Consensus 50 ~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg~ 93 (334)
T 3eno_A 50 VHHSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTA 93 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHHH
Confidence 44556777899999999999999999999998888888876544
No 125
>2wl8_A Peroxisomal biogenesis factor 19; protein transport, biogenesis disorder, zellweger syndrome, membrane, prenylation; 2.05A {Homo sapiens}
Probab=22.63 E-value=1.9e+02 Score=24.26 Aligned_cols=24 Identities=21% Similarity=0.511 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHhcC-CCCCHHHH
Q 007552 534 KIETAVKEALEWLDDN-QSAEKEDY 557 (599)
Q Consensus 534 ~i~~~l~e~~~WL~~~-~~~t~~~~ 557 (599)
.++.+.+++=.||.+| ...+.+++
T Consensus 34 pmKel~~kyP~WLe~nk~~l~~Ed~ 58 (126)
T 2wl8_A 34 SLKEITEKYPEWLQSHRESLPPEQF 58 (126)
T ss_dssp HHHHHHTTHHHHHHHHGGGSCHHHH
T ss_pred cHHHHHHHhhHHHHhCcccCCHHHH
Confidence 4666666677777766 23344443
No 126
>2nr5_A Hypothetical protein SO2669; PSI-2, MCSG, MAD, structural G protein structure initiative, midwest center for structural genomics; 1.90A {Shewanella oneidensis} SCOP: a.25.6.1
Probab=22.01 E-value=1.3e+02 Score=20.85 Aligned_cols=25 Identities=24% Similarity=0.375 Sum_probs=17.2
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHhcC
Q 007552 525 DKLESDEKDKIETAVKEALEWLDDN 549 (599)
Q Consensus 525 ~~~~~~e~~~i~~~l~e~~~WL~~~ 549 (599)
+...-.+.+--.+.+.++++||...
T Consensus 39 dssdmqeveiwtnrikeledwlwge 63 (67)
T 2nr5_A 39 DSSDMQEVEIWTNRIKELEDWLWGE 63 (67)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhhHHHHHHHHHHHHHHHHhhcC
Confidence 3344456667788999999999864
No 127
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=21.60 E-value=92 Score=32.02 Aligned_cols=46 Identities=22% Similarity=0.260 Sum_probs=36.9
Q ss_pred cccEEEEeCCCCCHHHHHHHHHHHHHcCCceeecccchHH-HHHHhccccC
Q 007552 104 IKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTA-AAIAYGLDKK 153 (599)
Q Consensus 104 ~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~A-aal~y~~~~~ 153 (599)
+.++|++.|+. ---.+.-||.++|.+.+.-+--..| ||++||...-
T Consensus 154 V~~Iv~~tPp~----i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI 200 (434)
T 1kae_A 154 CKKVVLCSPPP----IADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESV 200 (434)
T ss_dssp CSEEEEEECSS----CCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSS
T ss_pred CCeEEEECCCC----CCHHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCC
Confidence 57899999982 2246789999999999998888888 5789997543
No 128
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=20.83 E-value=97 Score=27.12 Aligned_cols=61 Identities=23% Similarity=0.373 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHhC-CCccCCCeEEEecCCCCcHHHHHHHHhHcCCCCCCCCCCCchhhhchHHHhhh
Q 007552 272 DLFRKTMGPVKKAMEDAG-LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGG 342 (599)
Q Consensus 272 ~~~~~i~~~i~~~l~~~~-~~~~~i~~ViLvGG~srip~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~ 342 (599)
.+.+++.+-..+.|.+.+ ....+|+ ++-|=|+-.+|+.-+.+.+.= +.|-.||.||++.+.
T Consensus 25 ~I~~~Ll~gA~~~l~~~G~v~~~~i~-v~~VPGafEiP~aa~~la~~~---------~yDavIaLG~VIrG~ 86 (156)
T 3nq4_A 25 FINDSLLDGAVDALTRIGQVKDDNIT-VVWVPGAYELPLATEALAKSG---------KYDAVVALGTVIRGG 86 (156)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTSEE-EEEESSTTTHHHHHHHHHHHC---------SCSEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHcCCCcccceE-EEEcCcHHHHHHHHHHHHhcC---------CCCEEEEeeeeecCC
Confidence 344555566667788888 7767777 777889999999998886541 246677777777654
No 129
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=20.60 E-value=2.3e+02 Score=29.37 Aligned_cols=24 Identities=33% Similarity=0.621 Sum_probs=21.3
Q ss_pred CccEEEEEEcCCCEEEEEEEEEeC
Q 007552 155 GEKNILVFDLGGGTFDVSILTIDN 178 (599)
Q Consensus 155 ~~~~vlVvD~Gggt~dvsv~~~~~ 178 (599)
....++.+|+||+++-+.+++..+
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC
T ss_pred ccceEEEEEeCCCeEEEEEEecCC
Confidence 346789999999999999999976
No 130
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=20.54 E-value=1.4e+02 Score=29.29 Aligned_cols=47 Identities=19% Similarity=0.106 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHHHHHhHc
Q 007552 269 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 318 (599)
Q Consensus 269 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f 318 (599)
+++...+.+...++++|++++++..+|+.+++-.++.+ +-+.+.+.+
T Consensus 228 v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~l 274 (333)
T 4dfe_A 228 VFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKL 274 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHh
Confidence 34455667778899999999999999999999988765 446777777
No 131
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=20.48 E-value=1.4e+02 Score=29.32 Aligned_cols=43 Identities=23% Similarity=0.315 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccCCCeEEEecCCCCcHHHHH
Q 007552 270 NNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQ 312 (599)
Q Consensus 270 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~ 312 (599)
-....+.+...|+++|++++++..+|+.|....|-+..+.++-
T Consensus 44 ~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lrv 86 (330)
T 2ivn_A 44 AEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRV 86 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHHH
Confidence 3445567778899999999999999999998877777766654
No 132
>1t0c_A Insulin; type I beta-turn, BEND, type III' beta-turn, hormone/growth factor complex; NMR {Homo sapiens}
Probab=20.16 E-value=37 Score=20.02 Aligned_cols=9 Identities=67% Similarity=1.343 Sum_probs=6.6
Q ss_pred cCCCCCCCC
Q 007552 579 SGGAPGAGT 587 (599)
Q Consensus 579 ~~~~~~~~~ 587 (599)
-||+||+|+
T Consensus 12 lgggpgags 20 (31)
T 1t0c_A 12 LGGGPGAGS 20 (31)
T ss_dssp CCCSTTSSS
T ss_pred ecCCCCccc
Confidence 577788875
Done!