Query 007553
Match_columns 599
No_of_seqs 413 out of 4651
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 04:38:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007553.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007553hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.1E-49 7.3E-54 441.7 31.2 392 19-412 269-738 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.5E-48 8.5E-53 433.1 29.4 385 9-394 284-744 (768)
3 3t6q_A CD180 antigen; protein- 100.0 1.4E-43 4.8E-48 386.0 37.7 387 4-392 42-515 (606)
4 3t6q_A CD180 antigen; protein- 100.0 2.1E-43 7.1E-48 384.7 34.5 407 4-412 66-558 (606)
5 4eco_A Uncharacterized protein 100.0 3.6E-44 1.2E-48 390.5 27.1 322 60-389 198-578 (636)
6 3j0a_A TOLL-like receptor 5; m 100.0 2.3E-43 8E-48 397.0 32.6 385 4-391 33-561 (844)
7 3vq2_A TLR4, TOLL-like recepto 100.0 6.1E-43 2.1E-47 381.0 31.2 402 4-413 41-557 (606)
8 4eco_A Uncharacterized protein 100.0 4.2E-43 1.4E-47 382.1 27.0 354 31-393 194-603 (636)
9 3vq2_A TLR4, TOLL-like recepto 100.0 3.3E-42 1.1E-46 375.2 30.9 398 5-412 21-532 (606)
10 4ecn_A Leucine-rich repeat pro 100.0 2.1E-42 7E-47 382.6 28.4 321 60-389 440-818 (876)
11 3v47_A TOLL-like receptor 5B a 100.0 5.6E-42 1.9E-46 360.0 29.0 366 4-374 19-413 (455)
12 2z63_A TOLL-like receptor 4, v 100.0 7.4E-42 2.5E-46 369.8 30.0 402 5-412 38-529 (570)
13 1ziw_A TOLL-like receptor 3; i 100.0 6.9E-41 2.4E-45 369.7 37.5 387 4-391 34-494 (680)
14 3j0a_A TOLL-like receptor 5; m 100.0 2.8E-41 9.7E-46 380.0 33.1 386 4-394 13-543 (844)
15 1ziw_A TOLL-like receptor 3; i 100.0 2.8E-40 9.7E-45 364.8 39.9 364 5-369 59-517 (680)
16 4ecn_A Leucine-rich repeat pro 100.0 2.7E-41 9.2E-46 373.7 27.6 348 36-393 440-843 (876)
17 2z63_A TOLL-like receptor 4, v 100.0 1.9E-40 6.4E-45 358.8 30.9 397 6-411 18-504 (570)
18 2z81_A CD282 antigen, TOLL-lik 100.0 2.2E-40 7.5E-45 356.5 27.5 394 5-412 15-508 (549)
19 2z7x_B TOLL-like receptor 1, v 100.0 4.9E-40 1.7E-44 351.2 28.4 372 4-392 9-483 (520)
20 3v47_A TOLL-like receptor 5B a 100.0 5.4E-40 1.8E-44 344.9 28.0 368 22-394 13-412 (455)
21 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-39 4.1E-44 350.8 27.0 379 4-394 35-514 (549)
22 2z7x_B TOLL-like receptor 1, v 100.0 2.3E-39 7.9E-44 346.0 26.5 377 22-413 3-480 (520)
23 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.5E-38 5.3E-43 342.5 30.5 371 5-391 41-511 (562)
24 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.1E-38 2.8E-42 336.8 29.9 383 15-413 27-509 (562)
25 2id5_A Lingo-1, leucine rich r 100.0 5.2E-38 1.8E-42 331.7 27.7 322 22-347 14-335 (477)
26 2id5_A Lingo-1, leucine rich r 100.0 5.5E-38 1.9E-42 331.5 26.9 326 46-374 13-338 (477)
27 1o6v_A Internalin A; bacterial 100.0 7.6E-37 2.6E-41 321.3 32.1 347 16-392 43-390 (466)
28 4g8a_A TOLL-like receptor 4; l 100.0 2.5E-36 8.4E-41 330.9 33.7 151 6-161 42-194 (635)
29 1o6v_A Internalin A; bacterial 100.0 4.5E-36 1.5E-40 315.4 31.0 335 5-371 56-390 (466)
30 3bz5_A Internalin-J, INLJ; leu 100.0 3.9E-36 1.3E-40 313.3 27.3 344 10-394 33-391 (457)
31 4g8a_A TOLL-like receptor 4; l 100.0 3.6E-35 1.2E-39 321.7 34.1 150 4-154 61-215 (635)
32 3o6n_A APL1; leucine-rich repe 100.0 5.8E-36 2E-40 307.4 24.8 317 42-376 43-359 (390)
33 3oja_B Anopheles plasmodium-re 100.0 1.7E-35 5.9E-40 320.4 24.1 317 42-376 49-365 (597)
34 4fmz_A Internalin; leucine ric 100.0 1.2E-34 4.2E-39 292.8 27.5 306 41-369 41-346 (347)
35 4fmz_A Internalin; leucine ric 100.0 1.3E-34 4.4E-39 292.6 27.1 309 13-345 38-346 (347)
36 3o6n_A APL1; leucine-rich repe 100.0 7E-35 2.4E-39 299.3 25.3 312 17-347 43-354 (390)
37 3oja_B Anopheles plasmodium-re 100.0 1.4E-34 4.8E-39 313.2 25.5 313 17-348 49-361 (597)
38 3bz5_A Internalin-J, INLJ; leu 100.0 5.2E-34 1.8E-38 297.3 28.8 324 34-392 32-370 (457)
39 1jl5_A Outer protein YOPM; leu 100.0 1.1E-33 3.7E-38 294.7 27.4 339 4-391 20-371 (454)
40 2ft3_A Biglycan; proteoglycan, 100.0 6E-33 2E-37 278.3 26.4 287 45-342 34-330 (332)
41 1jl5_A Outer protein YOPM; leu 100.0 4.6E-33 1.6E-37 289.9 26.3 329 17-391 9-351 (454)
42 1ogq_A PGIP-2, polygalacturona 100.0 4.8E-34 1.6E-38 283.3 17.6 249 44-319 50-302 (313)
43 2ft3_A Biglycan; proteoglycan, 100.0 7.2E-33 2.4E-37 277.8 26.3 304 4-319 13-331 (332)
44 1xku_A Decorin; proteoglycan, 100.0 1.9E-32 6.6E-37 274.5 28.6 288 45-366 32-329 (330)
45 1xku_A Decorin; proteoglycan, 100.0 3.8E-32 1.3E-36 272.3 29.3 286 68-387 31-329 (330)
46 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-33 5E-38 279.8 17.2 252 92-346 50-306 (313)
47 1z7x_W Ribonuclease inhibitor; 100.0 8.9E-36 3E-40 313.4 -9.0 369 18-387 2-437 (461)
48 1z7x_W Ribonuclease inhibitor; 100.0 2.1E-34 7.1E-39 303.0 -10.1 368 5-373 13-444 (461)
49 2z80_A TOLL-like receptor 2, v 100.0 3.5E-30 1.2E-34 260.5 15.5 277 41-321 28-314 (353)
50 2z66_A Variable lymphocyte rec 100.0 9.6E-30 3.3E-34 252.0 17.6 280 47-354 10-296 (306)
51 2z80_A TOLL-like receptor 2, v 100.0 7.1E-30 2.4E-34 258.3 16.4 279 17-300 29-317 (353)
52 2z66_A Variable lymphocyte rec 100.0 2.5E-29 8.7E-34 249.0 18.3 281 71-379 10-297 (306)
53 4fcg_A Uncharacterized protein 100.0 6.3E-29 2.2E-33 247.8 20.8 226 43-273 80-314 (328)
54 4fcg_A Uncharacterized protein 100.0 6.4E-29 2.2E-33 247.8 20.8 226 67-297 80-314 (328)
55 3zyi_A Leucine-rich repeat-con 100.0 5.8E-28 2E-32 252.6 26.5 249 45-298 55-304 (452)
56 1ozn_A Reticulon 4 receptor; N 100.0 5.6E-29 1.9E-33 243.8 16.7 225 47-274 14-239 (285)
57 3zyj_A Leucine-rich repeat-con 100.0 6.9E-28 2.4E-32 251.1 25.9 248 45-297 44-292 (440)
58 3zyi_A Leucine-rich repeat-con 100.0 4.8E-28 1.6E-32 253.2 24.7 248 69-321 55-303 (452)
59 3zyj_A Leucine-rich repeat-con 100.0 8.8E-28 3E-32 250.3 25.3 248 69-321 44-292 (440)
60 1ozn_A Reticulon 4 receptor; N 100.0 9.5E-29 3.3E-33 242.1 16.2 254 22-280 14-268 (285)
61 1wwl_A Monocyte differentiatio 99.9 2.8E-29 9.5E-34 249.1 4.4 249 40-298 39-310 (312)
62 1wwl_A Monocyte differentiatio 99.9 5E-29 1.7E-33 247.2 5.6 249 64-322 39-310 (312)
63 3o53_A Protein LRIM1, AGAP0063 99.9 3.1E-29 1.1E-33 249.3 2.7 254 49-340 15-270 (317)
64 3g06_A SSPH2 (leucine-rich rep 99.9 8.4E-26 2.9E-30 242.2 29.4 264 45-352 41-304 (622)
65 3o53_A Protein LRIM1, AGAP0063 99.9 1.3E-28 4.5E-33 244.8 5.3 265 72-374 14-281 (317)
66 3g06_A SSPH2 (leucine-rich rep 99.9 1.5E-25 5E-30 240.3 28.7 267 68-378 40-306 (622)
67 3oja_A Leucine-rich immune mol 99.9 4.6E-27 1.6E-31 247.1 10.5 232 117-362 35-268 (487)
68 3oja_A Leucine-rich immune mol 99.9 2.1E-27 7.3E-32 249.6 7.6 215 69-297 35-250 (487)
69 2z62_A TOLL-like receptor 4, v 99.9 4E-25 1.4E-29 215.2 20.1 133 45-177 29-162 (276)
70 2z62_A TOLL-like receptor 4, v 99.9 4.6E-25 1.6E-29 214.8 20.0 226 47-276 10-240 (276)
71 3ogk_B Coronatine-insensitive 99.9 3.8E-29 1.3E-33 271.4 -10.4 379 12-391 66-527 (592)
72 2o6q_A Variable lymphocyte rec 99.9 1.9E-24 6.4E-29 209.6 23.1 202 46-250 18-219 (270)
73 3ogk_B Coronatine-insensitive 99.9 6.3E-29 2.1E-33 269.7 -10.6 353 17-372 110-529 (592)
74 2o6q_A Variable lymphocyte rec 99.9 6.8E-24 2.3E-28 205.7 23.0 216 6-225 3-218 (270)
75 3rfs_A Internalin B, repeat mo 99.9 2.2E-24 7.6E-29 209.3 15.7 229 19-261 19-247 (272)
76 3rfs_A Internalin B, repeat mo 99.9 1.4E-24 4.9E-29 210.6 13.8 224 45-281 20-243 (272)
77 1p9a_G Platelet glycoprotein I 99.9 2.1E-23 7.3E-28 203.9 20.3 202 40-248 6-207 (290)
78 1p9a_G Platelet glycoprotein I 99.9 3.6E-23 1.2E-27 202.3 20.8 205 14-226 5-209 (290)
79 2p1m_B Transport inhibitor res 99.9 6.7E-27 2.3E-31 253.9 -9.9 374 14-389 61-518 (594)
80 2p1m_B Transport inhibitor res 99.9 1.1E-26 3.8E-31 252.1 -9.9 351 16-369 102-519 (594)
81 2xwt_C Thyrotropin receptor; s 99.9 7.2E-23 2.5E-27 194.7 17.2 196 69-270 32-236 (239)
82 2xwt_C Thyrotropin receptor; s 99.9 7.2E-23 2.5E-27 194.7 17.1 204 35-247 25-237 (239)
83 4glp_A Monocyte differentiatio 99.9 3E-23 1E-27 205.5 13.6 226 44-274 64-308 (310)
84 3goz_A Leucine-rich repeat-con 99.9 1.1E-24 3.7E-29 220.8 3.2 250 30-299 8-299 (362)
85 2ca6_A RAN GTPase-activating p 99.9 5.2E-25 1.8E-29 225.4 0.8 245 36-300 24-319 (386)
86 4glp_A Monocyte differentiatio 99.9 7.7E-23 2.6E-27 202.5 16.2 226 68-298 64-308 (310)
87 2ast_B S-phase kinase-associat 99.9 1E-24 3.6E-29 218.9 2.6 197 46-246 49-257 (336)
88 2ast_B S-phase kinase-associat 99.9 1E-24 3.4E-29 219.0 2.4 253 20-281 48-314 (336)
89 3goz_A Leucine-rich repeat-con 99.9 1.1E-24 3.7E-29 220.7 1.7 196 6-202 9-239 (362)
90 2ca6_A RAN GTPase-activating p 99.9 2.4E-25 8.2E-30 227.9 -3.3 250 59-325 23-320 (386)
91 3m19_A Variable lymphocyte rec 99.9 8.2E-22 2.8E-26 188.8 19.0 178 20-201 15-192 (251)
92 3m19_A Variable lymphocyte rec 99.9 7.9E-22 2.7E-26 188.9 18.8 179 44-225 14-192 (251)
93 1h6u_A Internalin H; cell adhe 99.9 4.3E-22 1.5E-26 196.6 16.4 191 67-273 40-230 (308)
94 1h6u_A Internalin H; cell adhe 99.9 5.5E-22 1.9E-26 195.9 16.3 195 40-250 37-231 (308)
95 4ay9_X Follicle-stimulating ho 99.9 3.3E-21 1.1E-25 194.1 20.2 200 47-250 12-216 (350)
96 4asz_A BDNF/NT-3 growth factor 99.9 3.7E-22 1.3E-26 194.3 9.6 114 483-599 13-155 (299)
97 4aoj_A High affinity nerve gro 99.9 5.7E-22 2E-26 195.8 10.3 114 483-599 41-185 (329)
98 4gt4_A Tyrosine-protein kinase 99.9 5.9E-22 2E-26 193.8 9.0 112 485-599 28-172 (308)
99 4ay9_X Follicle-stimulating ho 99.9 2.4E-20 8.4E-25 187.7 20.2 240 71-318 12-256 (350)
100 2o6s_A Variable lymphocyte rec 99.8 9.3E-21 3.2E-25 175.9 14.8 150 47-199 10-159 (208)
101 2o6s_A Variable lymphocyte rec 99.8 1.5E-20 5.3E-25 174.4 15.6 181 22-213 10-190 (208)
102 3omv_A RAF proto-oncogene seri 99.8 2.5E-21 8.6E-26 188.4 8.8 110 483-599 36-159 (307)
103 3hmm_A TGF-beta receptor type- 99.8 3E-21 1E-25 189.3 9.2 111 484-599 4-135 (303)
104 3cvr_A Invasion plasmid antige 99.8 1.1E-19 3.8E-24 192.4 15.5 187 45-259 60-253 (571)
105 3cvr_A Invasion plasmid antige 99.8 2.2E-19 7.7E-24 190.0 16.7 187 69-283 60-253 (571)
106 2v9t_B SLIT homolog 2 protein 99.8 5.4E-19 1.9E-23 165.1 15.9 151 47-200 14-164 (220)
107 2v9t_B SLIT homolog 2 protein 99.8 6.1E-19 2.1E-23 164.8 16.0 153 22-178 14-166 (220)
108 1h6t_A Internalin B; cell adhe 99.8 1.7E-19 5.8E-24 176.3 12.1 126 66-201 44-169 (291)
109 1h6t_A Internalin B; cell adhe 99.8 2.3E-19 7.9E-24 175.4 12.7 172 41-226 43-214 (291)
110 4ase_A Vascular endothelial gr 99.8 4.4E-20 1.5E-24 183.8 7.4 123 474-599 55-212 (353)
111 2v70_A SLIT-2, SLIT homolog 2 99.8 8.9E-19 3E-23 163.7 15.6 152 47-201 14-166 (220)
112 1m9s_A Internalin B; cell inva 99.8 5.8E-19 2E-23 189.0 16.1 173 15-202 39-211 (605)
113 2xot_A Amphoterin-induced prot 99.8 5.1E-19 1.8E-23 178.8 14.5 176 47-225 21-202 (361)
114 1m9s_A Internalin B; cell inva 99.8 2.8E-19 9.5E-24 191.5 12.7 171 41-225 40-210 (605)
115 2xot_A Amphoterin-induced prot 99.8 5.6E-19 1.9E-23 178.5 13.8 176 22-201 21-202 (361)
116 2v70_A SLIT-2, SLIT homolog 2 99.8 2.8E-18 9.6E-23 160.3 16.3 156 215-373 14-170 (220)
117 4b9d_A Serine/threonine-protei 99.8 1.1E-19 3.9E-24 179.4 6.8 113 483-599 24-152 (350)
118 3e6j_A Variable lymphocyte rec 99.8 3.1E-18 1E-22 161.2 16.2 153 46-202 21-173 (229)
119 4fih_A Serine/threonine-protei 99.8 1.1E-19 3.8E-24 179.1 6.2 109 484-599 75-197 (346)
120 4g31_A Eukaryotic translation 99.8 2.1E-19 7E-24 175.3 7.8 114 483-599 5-145 (299)
121 4ezg_A Putative uncharacterize 99.8 1.3E-18 4.3E-23 159.8 12.2 153 41-201 41-194 (197)
122 3fpq_A Serine/threonine-protei 99.8 2.3E-19 7.9E-24 173.3 7.0 109 487-599 30-158 (290)
123 4ezg_A Putative uncharacterize 99.8 1.4E-18 4.8E-23 159.6 11.8 156 14-178 39-195 (197)
124 3e6j_A Variable lymphocyte rec 99.8 1.2E-17 4E-22 157.2 18.1 156 214-373 21-176 (229)
125 4fie_A Serine/threonine-protei 99.8 3.1E-19 1E-23 180.5 6.8 110 483-599 151-274 (423)
126 4aw0_A HPDK1, 3-phosphoinositi 99.8 3.1E-19 1E-23 173.3 6.0 111 483-599 32-159 (311)
127 4g3f_A NF-kappa-beta-inducing 99.8 4.6E-19 1.6E-23 174.2 6.1 107 483-599 58-177 (336)
128 3hyh_A Carbon catabolite-derep 99.7 9.6E-19 3.3E-23 167.4 6.9 111 483-599 13-139 (275)
129 3ubd_A Ribosomal protein S6 ki 99.7 6.5E-19 2.2E-23 171.0 4.8 111 483-599 24-153 (304)
130 1dce_A Protein (RAB geranylger 99.7 1.9E-20 6.6E-25 199.3 -7.1 203 90-315 347-567 (567)
131 1dce_A Protein (RAB geranylger 99.7 2.4E-20 8.2E-25 198.6 -6.6 217 113-363 346-567 (567)
132 3sb4_A Hypothetical leucine ri 99.7 2.5E-18 8.4E-23 171.5 8.3 222 115-339 100-328 (329)
133 1xeu_A Internalin C; cellular 99.7 3.3E-18 1.1E-22 164.4 8.0 168 18-201 18-185 (263)
134 3sb4_A Hypothetical leucine ri 99.7 2.2E-18 7.6E-23 171.8 6.8 102 211-314 225-327 (329)
135 4b99_A Mitogen-activated prote 99.7 5.7E-18 2E-22 171.6 8.9 110 484-599 55-185 (398)
136 1xeu_A Internalin C; cellular 99.7 5.4E-17 1.8E-21 156.0 14.1 160 4-179 28-187 (263)
137 3uim_A Brassinosteroid insensi 99.7 2.3E-17 7.9E-22 164.4 9.3 130 470-599 17-161 (326)
138 2ell_A Acidic leucine-rich nuc 99.7 9.9E-17 3.4E-21 143.1 11.4 132 44-177 24-160 (168)
139 4fdw_A Leucine rich hypothetic 99.7 2.1E-15 7.3E-20 153.4 22.3 267 16-296 110-382 (401)
140 4fs7_A Uncharacterized protein 99.7 3.7E-15 1.3E-19 152.4 23.9 317 6-340 58-374 (394)
141 4b8c_D Glucose-repressible alc 99.7 7E-18 2.4E-22 185.3 3.8 191 44-246 173-369 (727)
142 1w8a_A SLIT protein; signaling 99.7 2E-16 6.8E-21 144.3 12.8 128 47-177 11-139 (192)
143 4b8c_D Glucose-repressible alc 99.7 6.1E-18 2.1E-22 185.8 2.3 191 19-222 173-369 (727)
144 4fdw_A Leucine rich hypothetic 99.7 5.2E-15 1.8E-19 150.6 23.4 268 41-321 110-383 (401)
145 1w8a_A SLIT protein; signaling 99.7 1.8E-16 6.1E-21 144.6 11.2 109 237-345 30-139 (192)
146 2ell_A Acidic leucine-rich nuc 99.7 3.1E-16 1.1E-20 139.9 12.0 133 67-201 23-160 (168)
147 2qkw_B Protein kinase; three-h 99.7 6.8E-17 2.3E-21 160.6 7.8 124 473-599 29-166 (321)
148 2je0_A Acidic leucine-rich nuc 99.7 1E-16 3.6E-21 139.9 7.6 127 44-172 17-148 (149)
149 2c30_A Serine/threonine-protei 99.7 2.1E-16 7.2E-21 156.9 10.0 122 471-599 23-168 (321)
150 2nru_A Interleukin-1 receptor- 99.7 2.7E-16 9.3E-21 155.2 10.6 125 471-599 13-160 (307)
151 3uto_A Twitchin; kinase, muscl 99.6 1.3E-16 4.4E-21 169.9 8.1 112 483-599 157-282 (573)
152 2je0_A Acidic leucine-rich nuc 99.6 1.7E-16 5.8E-21 138.5 7.4 130 17-149 15-149 (149)
153 2wfh_A SLIT homolog 2 protein 99.6 1.3E-15 4.4E-20 138.9 13.2 127 47-177 13-139 (193)
154 4f9c_A Cell division cycle 7-r 99.6 1.3E-16 4.4E-21 159.9 6.6 110 480-599 18-144 (361)
155 2qol_A Ephrin receptor; recept 99.6 4.5E-16 1.5E-20 157.7 8.9 112 483-599 45-174 (373)
156 2wfh_A SLIT homolog 2 protein 99.6 2.4E-15 8.2E-20 137.1 12.8 128 22-154 13-140 (193)
157 4hcu_A Tyrosine-protein kinase 99.6 7.3E-16 2.5E-20 149.0 9.8 112 483-599 10-133 (269)
158 3v5w_A G-protein coupled recep 99.6 3E-16 1E-20 166.1 7.2 111 483-599 189-319 (689)
159 1qcf_A Haematopoetic cell kina 99.6 3.1E-16 1.1E-20 163.4 7.2 115 481-599 186-311 (454)
160 2o6r_A Variable lymphocyte rec 99.6 4.1E-15 1.4E-19 133.8 13.4 128 47-177 10-137 (177)
161 1opk_A P150, C-ABL, proto-onco 99.6 7.6E-16 2.6E-20 162.1 8.4 114 482-599 219-345 (495)
162 4aw2_A Serine/threonine-protei 99.6 1.8E-16 6.2E-21 163.2 3.5 121 474-599 65-202 (437)
163 1fmk_A C-SRC, P60-SRC, tyrosin 99.6 6E-16 2.1E-20 161.1 7.2 114 482-599 183-307 (452)
164 2o6r_A Variable lymphocyte rec 99.6 8.1E-15 2.8E-19 131.8 13.7 133 21-157 9-141 (177)
165 3s95_A LIMK-1, LIM domain kina 99.6 1E-15 3.4E-20 151.3 8.5 112 483-599 10-135 (310)
166 3soc_A Activin receptor type-2 99.6 1E-15 3.4E-20 152.1 8.4 112 483-599 24-158 (322)
167 3cbl_A C-FES, proto-oncogene t 99.6 4.9E-16 1.7E-20 157.9 6.1 113 482-599 113-240 (377)
168 2eva_A TAK1 kinase - TAB1 chim 99.6 1.8E-15 6.2E-20 149.2 10.1 115 483-599 8-132 (307)
169 3gen_A Tyrosine-protein kinase 99.6 1.3E-15 4.3E-20 148.5 8.8 113 482-599 23-147 (283)
170 4fs7_A Uncharacterized protein 99.6 9.1E-14 3.1E-18 142.0 22.7 312 38-366 65-376 (394)
171 3qd2_B Eukaryotic translation 99.6 1.6E-15 5.5E-20 151.4 9.5 115 482-599 5-191 (332)
172 3kul_A Ephrin type-A receptor 99.6 1.6E-15 5.3E-20 150.9 9.2 111 484-599 50-178 (325)
173 2psq_A Fibroblast growth facto 99.6 1.7E-15 6E-20 153.3 9.5 115 482-599 80-230 (370)
174 3p86_A Serine/threonine-protei 99.6 1.1E-15 3.8E-20 150.7 7.8 116 480-599 34-166 (309)
175 2h8h_A Proto-oncogene tyrosine 99.6 9.2E-16 3.2E-20 163.0 7.0 114 482-599 266-390 (535)
176 3sxs_A Cytoplasmic tyrosine-pr 99.6 1.2E-15 4.2E-20 147.3 7.0 112 483-599 8-131 (268)
177 4euu_A Serine/threonine-protei 99.6 2.3E-15 7.9E-20 149.4 8.8 113 484-599 10-139 (319)
178 3q4u_A Activin receptor type-1 99.6 2.7E-15 9.2E-20 147.6 8.9 111 482-599 7-140 (301)
179 3niz_A Rhodanese family protei 99.6 2.6E-15 8.9E-20 148.3 8.8 112 483-599 21-146 (311)
180 3t9t_A Tyrosine-protein kinase 99.6 3.3E-15 1.1E-19 144.1 9.3 112 483-599 8-131 (267)
181 3ugc_A Tyrosine-protein kinase 99.6 1.6E-15 5.3E-20 148.8 7.1 112 483-599 10-141 (295)
182 1tki_A Titin; serine kinase, m 99.6 2.6E-15 8.8E-20 148.9 8.5 112 483-599 5-129 (321)
183 3vhe_A Vascular endothelial gr 99.6 1.8E-15 6E-20 152.9 7.4 124 473-599 12-220 (359)
184 3kmu_A ILK, integrin-linked ki 99.6 5.7E-15 1.9E-19 142.8 10.6 114 483-599 10-140 (271)
185 3l9p_A Anaplastic lymphoma kin 99.6 3.2E-15 1.1E-19 151.3 8.9 114 483-599 71-208 (367)
186 1a9n_A U2A', U2A'; complex (nu 99.6 3.6E-15 1.2E-19 134.0 8.2 131 40-176 15-152 (176)
187 1k9a_A Carboxyl-terminal SRC k 99.6 2.9E-15 9.8E-20 155.9 8.4 112 482-599 192-316 (450)
188 2vd5_A DMPK protein; serine/th 99.6 9.2E-16 3.1E-20 156.8 4.4 122 473-599 51-189 (412)
189 3fe3_A MAP/microtubule affinit 99.6 2.4E-15 8.1E-20 149.5 7.2 112 482-599 14-141 (328)
190 1luf_A Muscle-specific tyrosin 99.6 4.8E-15 1.6E-19 148.7 9.4 117 480-599 44-201 (343)
191 1ob3_A PFPK5, cell division co 99.6 4.7E-15 1.6E-19 144.9 8.9 111 484-599 3-127 (288)
192 3fxz_A Serine/threonine-protei 99.6 2.8E-15 9.7E-20 147.0 7.4 110 483-599 20-143 (297)
193 4eut_A Serine/threonine-protei 99.6 4.7E-15 1.6E-19 151.7 9.3 113 484-599 10-139 (396)
194 3e7e_A HBUB1, BUB1A, mitotic c 99.6 3.7E-15 1.3E-19 150.9 8.1 113 482-599 64-199 (365)
195 3zgw_A Maternal embryonic leuc 99.6 2.5E-15 8.6E-20 150.2 6.6 112 482-599 9-135 (347)
196 3v8s_A RHO-associated protein 99.6 1.4E-15 4.8E-20 155.4 4.9 118 475-599 61-195 (410)
197 3tki_A Serine/threonine-protei 99.6 5E-15 1.7E-19 147.0 8.4 111 483-599 7-132 (323)
198 1qpc_A LCK kinase; alpha beta 99.5 3.2E-15 1.1E-19 145.3 6.7 114 482-599 12-136 (279)
199 3uc3_A Serine/threonine-protei 99.5 3.7E-15 1.3E-19 150.3 7.1 111 483-599 20-143 (361)
200 2zv2_A Calcium/calmodulin-depe 99.5 7.7E-15 2.6E-19 144.1 9.2 110 483-599 13-164 (298)
201 2x4f_A Myosin light chain kina 99.5 3.6E-15 1.2E-19 151.0 6.9 109 486-599 92-214 (373)
202 2i1m_A Macrophage colony-stimu 99.5 2.5E-15 8.4E-20 150.2 5.6 117 480-599 43-191 (333)
203 3uqc_A Probable conserved tran 99.5 4.8E-15 1.6E-19 144.3 7.5 108 484-599 32-156 (286)
204 1a9n_A U2A', U2A'; complex (nu 99.5 1E-14 3.5E-19 131.0 9.0 135 13-154 13-154 (176)
205 1kob_A Twitchin; kinase, intra 99.5 9.3E-15 3.2E-19 148.4 9.4 112 483-599 51-176 (387)
206 1o6l_A RAC-beta serine/threoni 99.5 4.1E-15 1.4E-19 148.2 6.4 111 483-599 5-132 (337)
207 2yab_A Death-associated protei 99.5 7.7E-15 2.6E-19 147.6 8.4 111 483-599 12-142 (361)
208 1mp8_A Focal adhesion kinase 1 99.5 1.1E-14 3.6E-19 141.8 9.1 112 483-599 15-143 (281)
209 3o0g_A Cell division protein k 99.5 6E-15 2.1E-19 144.4 7.2 111 484-599 3-128 (292)
210 1ds9_A Outer arm dynein; leuci 99.5 5.3E-17 1.8E-21 149.1 -7.0 151 44-201 18-185 (198)
211 1ds9_A Outer arm dynein; leuci 99.5 6.7E-17 2.3E-21 148.4 -6.4 150 15-170 14-180 (198)
212 3c1x_A Hepatocyte growth facto 99.5 1.1E-14 3.6E-19 147.5 9.0 110 485-599 91-219 (373)
213 3kfa_A Tyrosine-protein kinase 99.5 3.2E-15 1.1E-19 146.0 5.0 115 481-599 11-138 (288)
214 4fvq_A Tyrosine-protein kinase 99.5 7.6E-15 2.6E-19 143.4 7.5 112 483-599 8-140 (289)
215 2bdw_A Hypothetical protein K1 99.5 1E-14 3.4E-19 147.2 8.6 112 482-599 28-155 (362)
216 1rjb_A FL cytokine receptor; k 99.5 1E-14 3.5E-19 146.3 8.6 116 481-599 43-199 (344)
217 2y0a_A Death-associated protei 99.5 1.1E-14 3.6E-19 144.9 8.4 111 483-599 11-141 (326)
218 3dtc_A Mitogen-activated prote 99.5 1.3E-14 4.5E-19 140.3 8.9 112 483-599 7-135 (271)
219 1fot_A TPK1 delta, CAMP-depend 99.5 1E-14 3.4E-19 144.3 8.1 112 482-599 5-133 (318)
220 2ozo_A Tyrosine-protein kinase 99.5 8.4E-15 2.9E-19 157.9 8.1 105 490-599 343-463 (613)
221 3tt0_A Basic fibroblast growth 99.5 1.4E-14 4.7E-19 147.5 9.2 114 483-599 69-218 (382)
222 3i6u_A CDS1, serine/threonine- 99.5 1.1E-14 3.7E-19 150.0 8.4 112 482-599 134-266 (419)
223 3g2f_A Bone morphogenetic prot 99.5 1.3E-14 4.4E-19 145.1 8.8 112 483-599 13-147 (336)
224 1t46_A HOMO sapiens V-KIT hard 99.5 1.4E-14 4.7E-19 143.3 8.8 115 482-599 22-172 (313)
225 2ivs_A Proto-oncogene tyrosine 99.5 1.2E-14 4.3E-19 143.7 8.4 115 482-599 22-177 (314)
226 2pvf_A Fibroblast growth facto 99.5 1.8E-14 6E-19 144.0 9.5 115 482-599 34-184 (334)
227 4eqm_A Protein kinase; transfe 99.5 8.4E-15 2.9E-19 143.4 7.0 110 484-599 12-138 (294)
228 1u5q_A Serine/threonine protei 99.5 7.3E-15 2.5E-19 147.3 6.6 112 483-599 54-181 (348)
229 4fr4_A YANK1, serine/threonine 99.5 1.1E-14 3.8E-19 147.3 7.6 111 483-599 15-142 (384)
230 1x8b_A WEE1HU, WEE1-like prote 99.5 8.9E-15 3E-19 142.8 6.7 115 482-599 10-142 (289)
231 2w4o_A Calcium/calmodulin-depe 99.5 1.2E-14 4E-19 146.0 7.5 111 482-599 52-175 (349)
232 3pg1_A Mitogen-activated prote 99.5 1.5E-14 5.2E-19 146.2 8.4 121 474-599 13-161 (362)
233 4f0f_A Serine/threonine-protei 99.5 2.6E-14 8.7E-19 139.5 9.5 112 483-599 19-151 (287)
234 2clq_A Mitogen-activated prote 99.5 1.6E-14 5.3E-19 141.6 8.0 112 485-599 24-149 (295)
235 1p4o_A Insulin-like growth fac 99.5 3.3E-15 1.1E-19 148.5 3.1 121 476-599 18-165 (322)
236 3lb7_A RAF proto-oncogene seri 99.5 2.6E-14 8.9E-19 140.8 9.5 110 483-599 36-159 (307)
237 2pmi_A Negative RE, cyclin-dep 99.5 1.9E-14 6.4E-19 142.6 8.4 114 483-599 5-135 (317)
238 3c0i_A Peripheral plasma membr 99.5 7.8E-15 2.7E-19 147.5 5.8 114 483-599 24-157 (351)
239 3is5_A Calcium-dependent prote 99.5 1E-14 3.5E-19 142.1 6.5 114 483-599 22-151 (285)
240 3gni_B Strad alpha; kinase fol 99.5 1.4E-14 4.9E-19 147.9 7.7 114 482-599 24-155 (389)
241 1xjd_A Protein kinase C, theta 99.5 7.7E-15 2.6E-19 146.7 5.6 114 480-599 14-145 (345)
242 3p1a_A MYT1 kinase, membrane-a 99.5 1.3E-14 4.4E-19 143.3 7.2 112 483-599 57-184 (311)
243 2y94_A 5'-AMP-activated protei 99.5 2E-14 6.7E-19 149.6 8.8 111 483-599 16-143 (476)
244 2xir_A Vascular endothelial gr 99.5 1.6E-14 5.5E-19 143.1 7.8 124 473-599 17-175 (316)
245 3a62_A Ribosomal protein S6 ki 99.5 1.1E-14 3.8E-19 144.9 6.6 112 482-599 16-148 (327)
246 2acx_A G protein-coupled recep 99.5 1.5E-14 5E-19 152.8 7.8 114 482-599 183-313 (576)
247 3ork_A Serine/threonine protei 99.5 9.9E-15 3.4E-19 144.2 6.2 111 483-599 12-143 (311)
248 2yfx_A Tyrosine-protein kinase 99.5 2.5E-14 8.7E-19 142.4 9.2 115 482-599 29-167 (327)
249 1rdq_E PKA C-alpha, CAMP-depen 99.5 1.1E-14 3.7E-19 146.0 6.5 111 483-599 41-168 (350)
250 3poz_A Epidermal growth factor 99.5 1.2E-14 4.1E-19 144.6 6.8 112 483-599 15-144 (327)
251 3txo_A PKC-L, NPKC-ETA, protei 99.5 8.8E-15 3E-19 146.8 5.7 112 482-599 22-151 (353)
252 2w1i_A JAK2; chromosomal rearr 99.5 2.6E-14 8.8E-19 142.3 9.1 112 483-599 41-172 (326)
253 3mdy_A Bone morphogenetic prot 99.5 2.1E-14 7.2E-19 143.6 8.4 114 481-599 35-169 (337)
254 4e5w_A Tyrosine-protein kinase 99.5 1.8E-14 6.2E-19 141.7 7.8 111 484-599 22-153 (302)
255 2vuw_A Serine/threonine-protei 99.5 1.2E-14 3.9E-19 145.4 6.4 111 482-599 19-189 (336)
256 3cok_A Serine/threonine-protei 99.5 2.2E-14 7.4E-19 139.3 8.1 113 482-599 10-139 (278)
257 1mqb_A Ephrin type-A receptor 99.5 2.4E-14 8.3E-19 142.8 8.6 110 485-599 46-174 (333)
258 4ejn_A RAC-alpha serine/threon 99.5 9.8E-15 3.4E-19 151.8 5.9 112 482-599 147-276 (446)
259 3lxl_A Tyrosine-protein kinase 99.5 1.6E-14 5.3E-19 143.9 7.1 112 483-599 23-154 (327)
260 3lxp_A Non-receptor tyrosine-p 99.5 3.4E-14 1.2E-18 140.8 9.5 108 485-599 33-161 (318)
261 3f66_A Hepatocyte growth facto 99.5 3.6E-14 1.2E-18 139.2 9.5 111 484-599 26-155 (298)
262 1u59_A Tyrosine-protein kinase 99.5 3.1E-14 1.1E-18 138.9 8.9 106 489-599 16-137 (287)
263 4fl3_A Tyrosine-protein kinase 99.5 1.4E-14 4.8E-19 156.6 7.0 105 489-599 375-496 (635)
264 3soa_A Calcium/calmodulin-depe 99.5 2E-14 6.7E-19 148.6 7.7 112 482-599 10-137 (444)
265 4gt6_A Cell surface protein; l 99.5 4.7E-12 1.6E-16 129.3 25.2 335 7-367 51-389 (394)
266 3a8x_A Protein kinase C IOTA t 99.5 1.7E-14 5.8E-19 144.4 6.6 111 483-599 9-137 (345)
267 2yex_A Serine/threonine-protei 99.5 4.7E-14 1.6E-18 136.8 9.5 112 482-599 6-132 (276)
268 3cc6_A Protein tyrosine kinase 99.5 3.2E-14 1.1E-18 138.3 8.2 113 482-599 11-140 (281)
269 2buj_A Serine/threonine-protei 99.5 2.3E-14 7.9E-19 142.0 7.3 114 483-599 29-161 (317)
270 3c4z_A Rhodopsin kinase; Ser/T 99.5 2.8E-14 9.5E-19 150.3 8.2 114 483-599 185-316 (543)
271 3f3z_A Calcium/calmodulin-depe 99.5 2E-14 6.9E-19 139.5 6.6 112 482-599 8-133 (277)
272 3fdn_A Serine/threonine-protei 99.5 2.1E-14 7.3E-19 139.4 6.8 112 482-599 8-136 (279)
273 3rp9_A Mitogen-activated prote 99.5 3E-14 1E-18 148.8 8.4 111 483-599 53-183 (458)
274 2pml_X PFPK7, Ser/Thr protein 99.5 3.3E-14 1.1E-18 142.9 8.3 112 483-599 31-179 (348)
275 3og7_A AKAP9-BRAF fusion prote 99.5 3.1E-14 1E-18 139.1 7.8 110 483-599 24-147 (289)
276 3gbz_A Kinase, CMGC CDK; ssgci 99.5 1.6E-14 5.6E-19 143.8 6.0 113 481-599 32-159 (329)
277 3gxj_A TGF-beta receptor type- 99.5 8.9E-15 3E-19 144.0 4.0 110 483-599 3-135 (303)
278 1zy4_A Serine/threonine-protei 99.5 2.3E-14 7.9E-19 140.9 7.0 113 482-599 5-143 (303)
279 2a2a_A Death-associated protei 99.5 2.9E-14 1E-18 141.5 7.5 111 483-599 12-142 (321)
280 4dc2_A Protein kinase C IOTA t 99.5 1.6E-14 5.6E-19 146.7 5.6 112 482-599 51-180 (396)
281 3kn6_A Ribosomal protein S6 ki 99.5 3.1E-14 1E-18 141.5 7.4 104 488-599 16-133 (325)
282 3ttj_A Mitogen-activated prote 99.5 3.8E-14 1.3E-18 147.6 8.4 109 483-599 62-191 (464)
283 1ua2_A CAK, cell division prot 99.5 3.5E-14 1.2E-18 142.5 7.8 114 481-599 8-139 (346)
284 2r5t_A Serine/threonine-protei 99.5 2.1E-14 7.2E-19 145.0 6.1 112 482-599 37-166 (373)
285 4agu_A Cyclin-dependent kinase 99.5 3.5E-14 1.2E-18 140.3 7.6 111 483-599 3-129 (311)
286 3bhy_A Death-associated protei 99.5 3.4E-14 1.2E-18 138.3 7.3 111 483-599 5-135 (283)
287 2izr_A Casein kinase I isoform 99.5 1.6E-14 5.5E-19 144.0 5.0 110 483-599 9-132 (330)
288 2j7t_A Serine/threonine-protei 99.5 3.4E-14 1.2E-18 139.7 7.3 112 483-599 19-144 (302)
289 3h4j_B AMPK kdaid, SNF1-like p 99.5 1.7E-14 6E-19 143.5 5.2 111 483-599 9-135 (336)
290 2qr7_A Ribosomal protein S6 ki 99.5 2.8E-14 9.6E-19 142.6 6.7 109 482-599 21-143 (342)
291 2ac3_A MAP kinase-interacting 99.5 3.2E-14 1.1E-18 140.9 7.0 106 488-599 18-138 (316)
292 2i0e_A Protein kinase C-beta I 99.5 2.2E-14 7.7E-19 143.8 5.8 112 482-599 19-148 (353)
293 3qup_A Tyrosine-protein kinase 99.5 3.1E-14 1.1E-18 141.4 6.7 116 481-599 21-164 (323)
294 2eue_A Carbon catabolite derep 99.5 5.5E-14 1.9E-18 136.2 8.0 110 484-599 14-139 (275)
295 3pls_A Macrophage-stimulating 99.5 1E-13 3.4E-18 136.1 9.9 109 486-599 24-151 (298)
296 3g39_A Variable lymphocyte rec 99.5 2.9E-13 1E-17 120.5 11.9 107 46-155 11-117 (170)
297 3kex_A Receptor tyrosine-prote 99.5 1.6E-14 5.4E-19 143.7 4.0 111 484-599 14-142 (325)
298 3a7i_A MST3 kinase, serine/thr 99.5 5.6E-14 1.9E-18 138.2 7.9 109 484-599 23-146 (303)
299 2ycf_A Serine/threonine-protei 99.5 4.1E-14 1.4E-18 140.5 6.9 112 482-599 9-141 (322)
300 3llt_A Serine/threonine kinase 99.5 5.1E-14 1.7E-18 142.2 7.7 116 479-599 31-164 (360)
301 3fme_A Dual specificity mitoge 99.5 3.8E-14 1.3E-18 138.5 6.5 115 482-599 6-137 (290)
302 3n9x_A Phosphotransferase; mal 99.5 5.7E-14 1.9E-18 145.3 8.1 111 483-599 26-156 (432)
303 3an0_A Dual specificity mitoge 99.5 3.5E-14 1.2E-18 142.2 6.3 115 482-599 50-181 (340)
304 2wtk_C Serine/threonine-protei 99.5 6.4E-14 2.2E-18 138.0 7.9 113 483-599 5-136 (305)
305 3mtl_A Cell division protein k 99.5 1.7E-14 5.9E-19 143.3 3.8 111 484-599 3-127 (324)
306 3eqc_A Dual specificity mitoge 99.5 6E-14 2.1E-18 141.7 7.8 111 483-599 33-159 (360)
307 2vwi_A Serine/threonine-protei 99.5 4.1E-14 1.4E-18 139.2 6.4 115 482-599 14-148 (303)
308 3q5i_A Protein kinase; CDPK, m 99.5 4.4E-14 1.5E-18 149.2 7.0 112 482-599 35-173 (504)
309 2y7j_A Phosphorylase B kinase 99.5 7.5E-14 2.6E-18 141.0 8.4 116 478-599 89-227 (365)
310 1nxk_A MAP kinase-activated pr 99.5 4.1E-14 1.4E-18 144.6 6.5 103 489-599 68-188 (400)
311 2w5a_A Serine/threonine-protei 99.5 4.2E-14 1.4E-18 137.3 6.3 118 482-599 5-143 (279)
312 3kk8_A Calcium/calmodulin depe 99.5 4.4E-14 1.5E-18 137.6 6.4 111 483-599 6-132 (284)
313 3nyv_A Calmodulin-domain prote 99.5 8E-14 2.7E-18 146.7 8.8 111 483-599 26-153 (484)
314 2jam_A Calcium/calmodulin-depe 99.5 5.4E-14 1.9E-18 138.4 7.0 111 483-599 9-133 (304)
315 2j0j_A Focal adhesion kinase 1 99.5 7.7E-14 2.6E-18 151.4 8.8 113 482-599 389-518 (656)
316 2x7f_A TRAF2 and NCK-interacti 99.5 1.5E-14 5.2E-19 143.9 2.9 120 476-599 17-156 (326)
317 3dbq_A Dual specificity protei 99.5 5.7E-14 2E-18 140.7 7.1 110 484-599 10-135 (343)
318 1byg_A CSK, protein (C-termina 99.5 3.8E-14 1.3E-18 137.6 5.6 112 482-599 20-144 (278)
319 3mi9_A Cell division protein k 99.5 7.6E-14 2.6E-18 140.4 8.0 112 483-599 17-151 (351)
320 3oz6_A Mitogen-activated prote 99.5 6.6E-14 2.2E-18 142.9 7.6 111 482-599 8-136 (388)
321 1xbb_A Tyrosine-protein kinase 99.4 6.4E-14 2.2E-18 137.0 7.1 111 483-599 16-144 (291)
322 4aaa_A Cyclin-dependent kinase 99.4 6.9E-14 2.4E-18 139.4 7.4 111 483-599 25-151 (331)
323 2wqm_A Serine/threonine-protei 99.4 6.9E-14 2.4E-18 138.1 7.3 114 483-599 32-163 (310)
324 3hko_A Calcium/calmodulin-depe 99.4 3.1E-14 1E-18 142.9 4.8 119 478-599 21-195 (345)
325 1vzo_A Ribosomal protein S6 ki 99.4 2.1E-14 7.3E-19 144.5 3.6 112 482-599 53-186 (355)
326 2vgo_A Serine/threonine-protei 99.4 6.1E-14 2.1E-18 136.6 6.6 111 483-599 14-141 (284)
327 1fvr_A Tyrosine-protein kinase 99.4 7.4E-14 2.5E-18 139.0 7.3 114 483-599 25-169 (327)
328 3lij_A Calcium/calmodulin depe 99.4 6E-14 2.1E-18 147.8 7.0 111 483-599 37-163 (494)
329 3brb_A Proto-oncogene tyrosine 99.4 1E-13 3.5E-18 137.1 8.2 116 481-599 32-174 (313)
330 1t4h_A Serine/threonine-protei 99.4 8.8E-14 3E-18 135.9 7.5 111 485-599 28-158 (290)
331 2h6d_A 5'-AMP-activated protei 99.4 6.6E-14 2.3E-18 135.7 6.5 111 483-599 11-138 (276)
332 2b9h_A MAP kinase FUS3, mitoge 99.4 1E-13 3.4E-18 139.7 8.0 110 483-599 11-139 (353)
333 3lzb_A Epidermal growth factor 99.4 8.3E-14 2.8E-18 138.5 7.2 112 483-599 15-144 (327)
334 3lm5_A Serine/threonine-protei 99.4 1.2E-13 4.3E-18 137.3 8.5 107 489-599 35-158 (327)
335 2r9u_A Variable lymphocyte rec 99.4 4.8E-13 1.6E-17 119.5 11.4 105 47-154 15-119 (174)
336 1b6c_B TGF-B superfamily recep 99.4 1.7E-13 5.8E-18 137.3 9.5 113 480-599 39-174 (342)
337 3mwu_A Calmodulin-domain prote 99.4 5.7E-14 1.9E-18 147.8 6.3 111 483-599 22-148 (486)
338 3dls_A PAS domain-containing s 99.4 4.3E-14 1.5E-18 141.0 5.0 112 482-599 23-157 (335)
339 2i6l_A Mitogen-activated prote 99.4 1.3E-13 4.5E-18 136.6 8.6 109 484-599 12-147 (320)
340 3eb0_A Putative uncharacterize 99.4 5.3E-14 1.8E-18 143.3 5.8 114 480-599 4-168 (383)
341 2a19_B Interferon-induced, dou 99.4 5.2E-14 1.8E-18 137.0 5.5 111 482-599 10-149 (284)
342 2owb_A Serine/threonine-protei 99.4 7.8E-14 2.7E-18 139.3 6.8 111 483-599 41-168 (335)
343 2h34_A Serine/threonine-protei 99.4 7.9E-14 2.7E-18 137.5 6.8 112 482-599 33-161 (309)
344 3ll6_A Cyclin G-associated kin 99.4 8.9E-14 3.1E-18 139.0 7.2 113 484-599 29-165 (337)
345 3nsz_A CK II alpha, casein kin 99.4 1.5E-13 5.1E-18 137.0 8.7 106 483-599 36-157 (330)
346 3op5_A Serine/threonine-protei 99.4 5.9E-14 2E-18 141.9 5.8 112 482-599 34-179 (364)
347 2pzi_A Probable serine/threoni 99.4 1.1E-13 3.8E-18 151.6 8.4 109 483-599 80-209 (681)
348 1cm8_A Phosphorylated MAP kina 99.4 1.1E-13 3.6E-18 140.0 7.6 109 483-599 25-155 (367)
349 2rku_A Serine/threonine-protei 99.4 7.1E-14 2.4E-18 136.9 6.2 111 483-599 15-142 (294)
350 3kvw_A DYRK2, dual specificity 99.4 9E-14 3.1E-18 143.5 7.2 112 484-599 98-227 (429)
351 2r3i_A Cell division protein k 99.4 1.2E-13 4E-18 135.6 7.6 113 483-599 3-130 (299)
352 3qyz_A Mitogen-activated prote 99.4 1.3E-13 4.3E-18 139.5 7.9 110 483-599 27-155 (364)
353 2zmd_A Dual specificity protei 99.4 1.3E-13 4.3E-18 140.6 7.7 109 484-599 57-182 (390)
354 1csn_A Casein kinase-1; phosph 99.4 9.7E-14 3.3E-18 136.1 6.6 110 483-599 10-133 (298)
355 1wak_A Serine/threonine-protei 99.4 1.1E-13 3.7E-18 141.8 7.2 113 483-599 37-174 (397)
356 2wei_A Calmodulin-domain prote 99.4 1.3E-13 4.4E-18 134.5 7.3 112 482-599 21-148 (287)
357 3byv_A Rhoptry kinase; malaria 99.4 6.1E-14 2.1E-18 142.5 5.0 114 482-599 72-233 (377)
358 3uzp_A CKI-delta, CKID, casein 99.4 1E-13 3.5E-18 135.8 6.5 110 483-599 9-132 (296)
359 4gt6_A Cell surface protein; l 99.4 3.5E-11 1.2E-15 122.8 25.5 295 63-368 58-369 (394)
360 1phk_A Phosphorylase kinase; g 99.4 1.1E-13 3.8E-18 135.7 6.6 112 482-599 16-151 (298)
361 3qa8_A MGC80376 protein; kinas 99.4 6.1E-14 2.1E-18 149.6 4.9 114 483-599 14-148 (676)
362 1j1b_A Glycogen synthase kinas 99.4 6.1E-14 2.1E-18 144.4 4.7 110 484-599 55-183 (420)
363 3rgf_A Cyclin-dependent kinase 99.4 6.6E-14 2.3E-18 143.7 4.9 108 488-599 26-155 (405)
364 3fhr_A MAP kinase-activated pr 99.4 2E-13 6.9E-18 136.3 8.1 112 483-599 28-155 (336)
365 3g39_A Variable lymphocyte rec 99.4 8.1E-13 2.8E-17 117.6 11.0 107 69-178 10-116 (170)
366 3com_A Serine/threonine-protei 99.4 1.5E-13 5.1E-18 135.9 6.8 112 482-599 28-152 (314)
367 3g33_A Cell division protein k 99.4 1.9E-13 6.4E-18 134.8 7.4 114 482-599 8-147 (308)
368 2y4i_B KSR2, HKSR2, kinase sup 99.4 1E-13 3.6E-18 137.4 5.5 111 482-599 32-157 (319)
369 2jii_A Serine/threonine-protei 99.4 5.1E-14 1.7E-18 141.7 3.3 108 483-599 42-186 (352)
370 2eu9_A Dual specificity protei 99.4 1.7E-13 5.9E-18 137.9 7.1 113 483-599 19-150 (355)
371 2xrw_A Mitogen-activated prote 99.4 2.1E-13 7.3E-18 138.1 7.7 109 483-599 25-154 (371)
372 3pfq_A PKC-B, PKC-beta, protei 99.4 1.3E-13 4.5E-18 150.0 6.4 113 481-599 339-469 (674)
373 3m2w_A MAP kinase-activated pr 99.4 1.9E-13 6.5E-18 134.2 6.9 103 489-599 24-144 (299)
374 4hgt_A Casein kinase I isoform 99.4 1.2E-13 4E-18 135.4 5.5 111 482-599 8-132 (296)
375 1z57_A Dual specificity protei 99.4 1.7E-13 6E-18 136.9 6.8 112 484-599 15-145 (339)
376 3e3p_A Protein kinase, putativ 99.4 2.1E-13 7.2E-18 137.7 7.4 123 476-599 16-158 (360)
377 3sv0_A Casein kinase I-like; t 99.4 1.8E-13 6.1E-18 142.7 6.7 110 483-599 7-130 (483)
378 2fst_X Mitogen-activated prote 99.4 3.3E-13 1.1E-17 136.3 8.4 110 483-599 29-159 (367)
379 2r9u_A Variable lymphocyte rec 99.4 1.4E-12 4.7E-17 116.5 11.1 106 70-178 14-119 (174)
380 4exu_A Mitogen-activated prote 99.4 4.5E-13 1.6E-17 135.7 8.8 109 483-599 42-171 (371)
381 3coi_A Mitogen-activated prote 99.4 5.9E-13 2E-17 133.9 9.4 109 483-599 24-153 (353)
382 2vx3_A Dual specificity tyrosi 99.4 3.6E-13 1.2E-17 137.0 7.6 116 482-599 53-186 (382)
383 3q60_A ROP5B; pseudokinase, tr 99.4 1.2E-13 4.2E-18 139.9 4.0 112 483-599 62-221 (371)
384 1u46_A ACK-1, activated CDC42 99.4 1.9E-13 6.7E-18 133.5 5.3 112 483-599 18-148 (291)
385 3aln_A Dual specificity mitoge 99.4 3.6E-13 1.2E-17 134.0 7.1 114 483-599 22-153 (327)
386 2v62_A Serine/threonine-protei 99.4 1.7E-13 5.9E-18 137.4 4.6 110 483-599 37-178 (345)
387 1zar_A RIO2 kinase; serine kin 99.4 8.6E-13 2.9E-17 127.7 8.5 103 484-599 91-220 (282)
388 3p23_A Serine/threonine-protei 99.4 2.3E-13 7.8E-18 140.4 4.3 110 483-599 24-145 (432)
389 4e7w_A Glycogen synthase kinas 99.4 2.9E-13 9.8E-18 138.2 4.9 110 484-599 41-168 (394)
390 3cek_A Dual specificity protei 99.3 8.1E-13 2.8E-17 130.6 7.5 111 482-599 27-154 (313)
391 1blx_A Cyclin-dependent kinase 99.3 4.1E-13 1.4E-17 133.5 5.3 115 481-599 9-147 (326)
392 2rio_A Serine/threonine-protei 99.3 5.7E-13 1.9E-17 137.8 6.3 109 486-599 18-142 (434)
393 2iwi_A Serine/threonine-protei 99.3 2.6E-13 8.8E-18 134.1 3.3 112 482-599 30-166 (312)
394 1q8y_A SR protein kinase; tran 99.3 7.2E-13 2.5E-17 134.4 6.5 112 483-599 19-159 (373)
395 2dyl_A Dual specificity mitoge 99.3 1.8E-12 6.2E-17 128.3 7.2 113 482-599 24-152 (318)
396 3un9_A NLR family member X1; l 99.3 2.9E-14 1E-18 143.6 -6.3 160 68-227 72-254 (372)
397 3a99_A Proto-oncogene serine/t 99.3 6.2E-13 2.1E-17 131.8 2.4 112 482-599 42-176 (320)
398 3un9_A NLR family member X1; l 99.3 6.5E-14 2.2E-18 141.1 -5.5 206 67-273 46-283 (372)
399 3en9_A Glycoprotease, O-sialog 99.3 2.5E-12 8.7E-17 136.0 6.3 98 487-599 340-458 (540)
400 2ifg_A High affinity nerve gro 99.3 9.8E-12 3.4E-16 124.7 9.4 104 48-154 12-117 (347)
401 4h09_A Hypothetical leucine ri 99.2 1.1E-08 3.7E-13 103.7 28.5 301 41-355 43-355 (379)
402 3dzo_A Rhoptry kinase domain; 99.2 6.2E-12 2.1E-16 129.1 4.3 115 482-599 77-238 (413)
403 2ifg_A High affinity nerve gro 99.2 7.5E-11 2.6E-15 118.2 10.1 104 71-177 11-116 (347)
404 4h09_A Hypothetical leucine ri 99.2 9.8E-09 3.3E-13 104.0 25.8 303 15-332 42-356 (379)
405 1zth_A RIO1 serine protein kin 99.2 1.4E-11 4.6E-16 117.8 4.1 110 486-599 50-198 (258)
406 4azs_A Methyltransferase WBDD; 99.2 1.4E-11 4.7E-16 131.2 4.6 100 491-599 242-366 (569)
407 4gyi_A RIO2 kinase; protein ki 99.0 3.6E-10 1.2E-14 112.2 6.2 103 485-599 97-232 (397)
408 2ra8_A Uncharacterized protein 99.0 1.4E-10 4.7E-15 115.7 2.6 180 39-223 134-341 (362)
409 2ra8_A Uncharacterized protein 99.0 2.2E-10 7.4E-15 114.3 3.4 199 44-247 107-341 (362)
410 1io0_A Tropomodulin; LRR prote 98.5 1.6E-08 5.3E-13 91.0 -0.1 16 90-105 63-78 (185)
411 1io0_A Tropomodulin; LRR prote 98.5 1.8E-08 6.2E-13 90.5 -0.4 115 38-152 30-163 (185)
412 3rw6_A Nuclear RNA export fact 98.3 2.3E-08 7.8E-13 94.4 -2.5 80 89-170 167-257 (267)
413 3rw6_A Nuclear RNA export fact 98.3 3.3E-08 1.1E-12 93.3 -2.0 79 66-146 168-257 (267)
414 3e4g_A ATP synthase subunit S, 98.2 3.4E-07 1.2E-11 79.9 2.6 83 69-151 62-150 (176)
415 3e4g_A ATP synthase subunit S, 98.2 6E-07 2.1E-11 78.4 3.4 92 84-175 53-150 (176)
416 1pgv_A TMD-1, tropomodulin TMD 97.3 3.5E-05 1.2E-09 68.6 0.0 12 187-198 156-167 (197)
417 3tm0_A Aminoglycoside 3'-phosp 97.3 0.00036 1.2E-08 66.1 7.1 98 481-587 12-123 (263)
418 1nd4_A Aminoglycoside 3'-phosp 97.2 0.00032 1.1E-08 66.3 6.0 84 492-587 29-125 (264)
419 1pgv_A TMD-1, tropomodulin TMD 97.2 0.00011 3.9E-09 65.3 2.4 61 136-196 66-134 (197)
420 3dxp_A Putative acyl-COA dehyd 96.8 0.002 7E-08 64.0 7.8 94 488-587 43-157 (359)
421 3rfe_A Platelet glycoprotein I 96.5 0.0043 1.5E-07 51.4 6.2 57 47-105 11-68 (130)
422 3rfe_A Platelet glycoprotein I 96.3 0.0062 2.1E-07 50.4 6.3 59 312-372 12-71 (130)
423 3d1u_A Putative fructosamine-3 96.1 0.0071 2.4E-07 57.9 6.1 87 487-588 19-115 (288)
424 2ks1_B Epidermal growth factor 93.7 0.06 2E-06 34.1 3.2 27 422-448 13-40 (44)
425 3sg8_A APH(2'')-ID; antibiotic 92.5 0.18 6.3E-06 48.3 6.5 89 489-587 26-132 (304)
426 3r70_A Aminoglycoside phosphot 91.6 0.39 1.3E-05 46.4 7.7 93 485-587 39-143 (320)
427 2l2t_A Receptor tyrosine-prote 88.9 0.21 7.3E-06 31.5 2.0 27 422-448 12-39 (44)
428 2jwa_A Receptor tyrosine-prote 88.4 0.19 6.6E-06 31.6 1.5 28 421-448 13-40 (44)
429 3tdw_A Gentamicin resistance p 85.1 1.9 6.7E-05 41.1 7.5 89 489-587 25-129 (306)
430 2olc_A MTR kinase, methylthior 85.0 1.3 4.3E-05 44.2 6.4 65 489-553 36-120 (397)
431 3f7w_A Putative fructosamine-3 82.1 1.1 3.9E-05 42.3 4.4 69 485-553 17-95 (288)
432 2lz0_A Uncharacterized protein 76.7 5.5 0.00019 30.5 6.0 48 5-54 6-53 (100)
433 3jr1_A Putative fructosamine-3 73.0 7 0.00024 37.3 7.0 82 488-588 41-136 (312)
434 3ovc_A Hygromycin-B 4-O-kinase 72.1 9.5 0.00032 37.2 7.9 87 488-588 46-146 (362)
435 2lz0_A Uncharacterized protein 65.9 15 0.00053 28.0 6.3 46 55-101 7-52 (100)
436 4gkh_A Aminoglycoside 3'-phosp 58.9 21 0.00073 32.7 7.3 88 491-587 32-134 (272)
437 3ats_A Putative uncharacterize 58.0 34 0.0012 32.9 8.9 99 489-587 26-157 (357)
438 1iij_A ERBB-2 receptor protein 53.0 1.1 3.7E-05 26.6 -1.8 25 422-446 10-34 (35)
439 2q83_A YTAA protein; 2635576, 52.7 32 0.0011 32.7 7.6 83 490-586 39-137 (346)
440 1zyl_A Hypothetical protein YI 50.7 61 0.0021 30.5 9.3 44 473-517 11-59 (328)
441 2pyw_A Uncharacterized protein 40.5 75 0.0026 31.3 8.3 90 489-587 40-152 (420)
442 3dxq_A Choline/ethanolamine ki 33.7 88 0.003 29.0 7.2 84 488-587 23-119 (301)
443 3cxl_A N-chimerin; SH2, RHO-GA 32.9 6 0.00021 40.2 -1.4 42 496-537 152-205 (463)
444 4ann_A ESSB; membrane protein, 27.7 57 0.0019 28.9 4.2 66 528-599 36-126 (215)
445 3i1a_A Spectinomycin phosphotr 26.9 2E+02 0.0069 27.2 8.5 85 493-588 33-131 (339)
446 1nw1_A Choline kinase (49.2 KD 25.5 1.1E+02 0.0038 30.3 6.6 89 489-587 79-182 (429)
447 2ppq_A HSK, HK, homoserine kin 25.3 2.4E+02 0.0082 26.1 8.7 44 473-517 7-55 (322)
448 3feg_A Choline/ethanolamine ki 24.4 1E+02 0.0035 30.0 5.9 88 490-588 57-161 (379)
449 4ano_A ESSB; membrane protein, 23.8 42 0.0014 29.8 2.6 56 538-599 58-131 (219)
450 3mes_A Choline kinase; malaria 20.0 1.2E+02 0.0042 30.0 5.5 89 490-587 77-180 (424)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.1e-49 Score=441.68 Aligned_cols=392 Identities=34% Similarity=0.525 Sum_probs=299.4
Q ss_pred CCCcEEeeCCCCCCeecCCcccCC-CCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCcc-CCCCCCCcE
Q 007553 19 PNLVTFRIWGTRFLSGRIPSETGA-LSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLE-FGNLKDLYD 96 (599)
Q Consensus 19 ~~L~~L~l~~~~~~~~~~~~~~~~-~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~-~~~l~~L~~ 96 (599)
++|++|++++ |.+.+.+|+.+.. +++|++|++++|.+++.+|..|+.+++|++|++++|.+++.+|.. |.++++|++
T Consensus 269 ~~L~~L~L~~-n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~ 347 (768)
T 3rgz_A 269 KSLQYLSLAE-NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKV 347 (768)
T ss_dssp TTCCEEECCS-SEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCE
T ss_pred CCCCEEECcC-CccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCE
Confidence 3333444433 3334444444433 255555555555555455555555555555555555555444433 455555555
Q ss_pred EEeecCcCCccCCccccCCC-cCCEEeeecccccccCCccccC--CCcccEEecccCccCCCCcccccCCCCCCeeeccc
Q 007553 97 LRLQGNKLDGLIPSSIGNLT-NLTHLDLSLNQLSGRLPQEVGN--LKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAY 173 (599)
Q Consensus 97 L~L~~n~~~~~~~~~~~~l~-~L~~L~l~~n~i~~~~~~~l~~--l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~ 173 (599)
|++++|++.+.+|..+..++ +|++|++++|.+.+.+|..+.. +++|++|++++|.+++.+|..+..+++|++|++++
T Consensus 348 L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 427 (768)
T 3rgz_A 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 427 (768)
T ss_dssp EECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCS
T ss_pred EeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcC
Confidence 55555555544555555544 5555555555555555554444 66788888888888778888888899999999999
Q ss_pred ccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCC
Q 007553 174 NNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLP 253 (599)
Q Consensus 174 n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 253 (599)
|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|++|++++|.+++.+|
T Consensus 428 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 507 (768)
T 3rgz_A 428 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507 (768)
T ss_dssp SEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred CcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCC
Confidence 99988888889999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccC-----------------------------
Q 007553 254 REVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPEL----------------------------- 304 (599)
Q Consensus 254 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~----------------------------- 304 (599)
.+++.+++|+.|+|++|.+.+.+|..+..+++|+.|++++|++.+.+|..+
T Consensus 508 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (768)
T 3rgz_A 508 KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC 587 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTC
T ss_pred hHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccc
Confidence 999999999999999999999999999999999999999998887766533
Q ss_pred -----------------------------------------cCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCcc
Q 007553 305 -----------------------------------------MNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNF 343 (599)
Q Consensus 305 -----------------------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 343 (599)
..+++|+.|++++|.++|.+|..++.++.|+.|++++|+
T Consensus 588 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~ 667 (768)
T 3rgz_A 588 HGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667 (768)
T ss_dssp CSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSC
T ss_pred cccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCc
Confidence 335678999999999999999999999999999999999
Q ss_pred ccccCCcccCCCCCCCEEECCCCcCcccCCccCCC---CCeeecccCccceeCCCCCCCCCCCCcccccCCC
Q 007553 344 INGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVFR---VPGLKWSENNLEVENPVISENAPPPQTQHFKGNK 412 (599)
Q Consensus 344 l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~---~~~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (599)
++|.+|..++.++.|+.||+++|.++|.+|..+.. +..+++++|++.|.+|.. ..+.......+.||+
T Consensus 668 l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~ 738 (768)
T 3rgz_A 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNP 738 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCT
T ss_pred cCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCc
Confidence 99999999999999999999999999999987654 478899999999999843 223344445566665
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.5e-48 Score=433.09 Aligned_cols=385 Identities=36% Similarity=0.548 Sum_probs=345.8
Q ss_pred ccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcC-CCCCCCCCEEeccCCcccccCCcc
Q 007553 9 ELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSE-IGSLRDLLELNLSYNILNGSIPLE 87 (599)
Q Consensus 9 ~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~-~~~l~~L~~L~L~~n~~~~~~p~~ 87 (599)
.++..-...+++|++|++++ |.+.+.+|..++.+++|++|++++|.+++.+|.. +..+++|++|++++|.+++.+|..
T Consensus 284 ~ip~~~~~~~~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~ 362 (768)
T 3rgz_A 284 EIPDFLSGACDTLTGLDLSG-NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 362 (768)
T ss_dssp SCCCCSCTTCTTCSEEECCS-SEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTT
T ss_pred ccCHHHHhhcCcCCEEECcC-CcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHH
Confidence 45544444469999999998 8999999999999999999999999998888865 899999999999999999899999
Q ss_pred CCCCC-CCcEEEeecCcCCccCCccccC--CCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCC
Q 007553 88 FGNLK-DLYDLRLQGNKLDGLIPSSIGN--LTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLN 164 (599)
Q Consensus 88 ~~~l~-~L~~L~L~~n~~~~~~~~~~~~--l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 164 (599)
+.+++ +|++|++++|++.+.+|..+.. +++|++|++++|.+++.+|..+.++++|++|++++|.+++.+|..+..++
T Consensus 363 l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 442 (768)
T 3rgz_A 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 442 (768)
T ss_dssp HHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT
T ss_pred HHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCC
Confidence 98887 9999999999998888877776 88999999999999988999999999999999999999999999999999
Q ss_pred CCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEcc
Q 007553 165 QLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLS 244 (599)
Q Consensus 165 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 244 (599)
+|+.|++++|.+.+.+|..+..+++|++|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|.++..+++|++|+++
T Consensus 443 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 522 (768)
T 3rgz_A 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 522 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECC
Confidence 99999999999998899999999999999999999999899999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCcccCCCCCCCEEeccCcceeecCCcC---------------------------------------------
Q 007553 245 SNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPT--------------------------------------------- 279 (599)
Q Consensus 245 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~--------------------------------------------- 279 (599)
+|.+++.+|..+..+++|+.|++++|.+.|.+|..
T Consensus 523 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (768)
T 3rgz_A 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSE 602 (768)
T ss_dssp SSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGG
T ss_pred CCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccch
Confidence 99999999999999999999999999988776653
Q ss_pred -------------------------ccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCC
Q 007553 280 -------------------------IGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHL 334 (599)
Q Consensus 280 -------------------------~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 334 (599)
+..+++|+.|++++|++++.+|..+..+++|+.|+|++|.++|.+|..++.+++|
T Consensus 603 ~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L 682 (768)
T 3rgz_A 603 QLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGL 682 (768)
T ss_dssp GGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred hhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCC
Confidence 3335789999999999999999999999999999999999999999999999999
Q ss_pred CEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCcc--CCCCCeeecccCccceeCC
Q 007553 335 RQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKS--VFRVPGLKWSENNLEVENP 394 (599)
Q Consensus 335 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~--~~~~~~l~~~~n~~~~~~~ 394 (599)
+.|++++|+++|.+|..+..++.|+.||+++|+++|.+|.. +..+....+.+|+.-+..|
T Consensus 683 ~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 683 NILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp CEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 99999999999999999999999999999999999999964 3334555666776544443
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.4e-43 Score=386.02 Aligned_cols=387 Identities=20% Similarity=0.195 Sum_probs=231.3
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCccccc
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGS 83 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~ 83 (599)
.+.+..++..+|+++++|++|++++ |.+.+..|..|+++++|++|++++|.+++..|..|+++++|++|++++|.+++.
T Consensus 42 ~n~i~~~~~~~~~~l~~L~~L~Ls~-n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l 120 (606)
T 3t6q_A 42 FNVLPTIQNTTFSRLINLTFLDLTR-CQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSI 120 (606)
T ss_dssp TCCCSEECTTTSTTCTTCSEEECTT-CCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCG
T ss_pred CCccCcCChhHhccCccceEEECCC-CccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccC
Confidence 4567778778888899999999988 888888888888899999999999988888888888889999999999988876
Q ss_pred CCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCccc--EEecccCccCCCCccc--
Q 007553 84 IPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLV--SLFLDNNNLTGPIPST-- 159 (599)
Q Consensus 84 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~--~L~l~~n~i~~~~~~~-- 159 (599)
.|..|.++++|++|++++|++.+..+..+..+++|++|++++|.+.+..+..+.++++|+ +|++++|.+++..|..
T Consensus 121 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~ 200 (606)
T 3t6q_A 121 DFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFD 200 (606)
T ss_dssp GGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTT
T ss_pred CcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhh
Confidence 677788888888888888888865434455588888888888888877677777777777 6677776665443332
Q ss_pred -------------------------------------------------------------------------ccCCCCC
Q 007553 160 -------------------------------------------------------------------------LYHLNQL 166 (599)
Q Consensus 160 -------------------------------------------------------------------------l~~l~~L 166 (599)
|..+++|
T Consensus 201 ~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 280 (606)
T 3t6q_A 201 SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGL 280 (606)
T ss_dssp TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTC
T ss_pred hccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCC
Confidence 3344444
Q ss_pred CeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcc-cCCCCCCCCEEEccC
Q 007553 167 STLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPP-TIGNLTYLTSLDLSS 245 (599)
Q Consensus 167 ~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~ 245 (599)
++|++++|.+. .+|..+..+++|++|++++|.+.+..+..+..+++|+.|++++|.+.+.++. .+..+++|++|++++
T Consensus 281 ~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 359 (606)
T 3t6q_A 281 QELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSH 359 (606)
T ss_dssp SEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCS
T ss_pred CEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCC
Confidence 44555444444 3344444445555555555544444444444444444444444444433322 244445555555555
Q ss_pred CcCCCCC--CcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCcc-CcCCCCCCEEEcccCcCcc
Q 007553 246 NQLSGLL--PREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPE-LMNCSQLQNLAVNHNSLSG 322 (599)
Q Consensus 246 n~l~~~~--~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~-~~~l~~L~~L~l~~n~l~~ 322 (599)
|.+.+.. +..+..+++|++|++++|.+.+..+..+..+++|++|++++|.+.+..+.. +..+++|+.|++++|.+.+
T Consensus 360 n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 439 (606)
T 3t6q_A 360 DDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDI 439 (606)
T ss_dssp SCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBT
T ss_pred CccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCC
Confidence 5444332 334444555555555555554444444444555555555555544433322 4444555555555555544
Q ss_pred CCCccccCCCCCCEEeCCCcccccc---CCcccCCCCCCCEEECCCCcCcccCCccCCC---CCeeecccCcccee
Q 007553 323 SIPSEIGNLIHLRQLDLSHNFINGT---IPSQLGKIPNVSEVDVSKNNLSGVIPKSVFR---VPGLKWSENNLEVE 392 (599)
Q Consensus 323 ~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~---~~~l~~~~n~~~~~ 392 (599)
..|..+..+++|++|++++|.+++. .+..+..+++|+.|++++|.+++..|..+.. ++.+++++|++.+.
T Consensus 440 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 515 (606)
T 3t6q_A 440 SSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSS 515 (606)
T ss_dssp TCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGG
T ss_pred cCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcC
Confidence 4444444455555555555554431 1133444455555555555555444433322 24444455544443
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.1e-43 Score=384.67 Aligned_cols=407 Identities=21% Similarity=0.173 Sum_probs=345.9
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCccccc
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGS 83 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~ 83 (599)
.+.+..+....|+++++|++|++++ |.+.+..|..++++++|++|++++|.+++..+..++.+++|++|++++|.+++.
T Consensus 66 ~n~i~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~ 144 (606)
T 3t6q_A 66 RCQIYWIHEDTFQSQHRLDTLVLTA-NPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSI 144 (606)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTT-CCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCC
T ss_pred CCccceeChhhccCccccCeeeCCC-CcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCccccc
Confidence 4567788888899999999999998 899988899999999999999999999977678899999999999999999875
Q ss_pred CCccCCCCCCCcEEEeecCcCCccCCccccCCCcCC--EEeeeccccccc------------------------------
Q 007553 84 IPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLT--HLDLSLNQLSGR------------------------------ 131 (599)
Q Consensus 84 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~--~L~l~~n~i~~~------------------------------ 131 (599)
.+..+..+++|++|++++|.+.+..|..|+.+++|+ .|++++|.+.+.
T Consensus 145 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~ 224 (606)
T 3t6q_A 145 KLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKN 224 (606)
T ss_dssp CCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTT
T ss_pred CcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccc
Confidence 545555699999999999998877777777777777 666666655433
Q ss_pred ---------------------------------------------CCccccCCCcccEEecccCccCCCCcccccCCCCC
Q 007553 132 ---------------------------------------------LPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQL 166 (599)
Q Consensus 132 ---------------------------------------------~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L 166 (599)
.+..+.++++|++|++++|.++ .+|..+..+++|
T Consensus 225 ~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L 303 (606)
T 3t6q_A 225 STIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTL 303 (606)
T ss_dssp CEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTC
T ss_pred cchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccC
Confidence 3344777899999999999998 678889999999
Q ss_pred CeeecccccccccCccccCCCCCCCEEEccCCcccccCch-hccCCCCCCEEeCCCCcCcccC--cccCCCCCCCCEEEc
Q 007553 167 STLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPS-TIGFLNLLDELRLSHNRLDGPI--PPTIGNLTYLTSLDL 243 (599)
Q Consensus 167 ~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~-~~~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l 243 (599)
++|++++|.+.+..+..+..+++|++|++++|.+.+.++. .+..+++|+.|++++|.+.+.. +..+..+++|++|++
T Consensus 304 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l 383 (606)
T 3t6q_A 304 KKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNL 383 (606)
T ss_dssp CEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEEC
T ss_pred CEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEEC
Confidence 9999999999988888999999999999999998866654 5889999999999999998765 678999999999999
Q ss_pred cCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcC-ccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCcc
Q 007553 244 SSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPT-IGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSG 322 (599)
Q Consensus 244 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~-~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 322 (599)
++|.+.+..|..+..+++|+.|++++|.+.+..+.. +..+++|++|++++|.+.+..|..+..+++|+.|++++|.+.+
T Consensus 384 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 463 (606)
T 3t6q_A 384 SYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPK 463 (606)
T ss_dssp CSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGG
T ss_pred CCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCc
Confidence 999999888999999999999999999999876544 8899999999999999998888899999999999999999986
Q ss_pred C---CCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCccCCCCC--eeecccCccceeCCCCC
Q 007553 323 S---IPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVFRVP--GLKWSENNLEVENPVIS 397 (599)
Q Consensus 323 ~---~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~~~--~l~~~~n~~~~~~~~~~ 397 (599)
. .+..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..|..+..++ .+++++|.+.+..|...
T Consensus 464 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~L~L~~N~l~~~~~~~~ 543 (606)
T 3t6q_A 464 GNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNHISIILPSLL 543 (606)
T ss_dssp GEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSCEEECCSSCCCCCCGGGH
T ss_pred cccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcccccEEECcCCcccccCHhhc
Confidence 2 335788999999999999999998899999999999999999999999888776654 56778998886554211
Q ss_pred CCCCCCCcccccCCC
Q 007553 398 ENAPPPQTQHFKGNK 412 (599)
Q Consensus 398 ~~~~~~~~~~~~~~~ 412 (599)
...+......+.+|+
T Consensus 544 ~~l~~L~~L~l~~N~ 558 (606)
T 3t6q_A 544 PILSQQRTINLRQNP 558 (606)
T ss_dssp HHHHTSSEEECTTCC
T ss_pred ccCCCCCEEeCCCCC
Confidence 122233444455555
No 5
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.6e-44 Score=390.55 Aligned_cols=322 Identities=23% Similarity=0.356 Sum_probs=182.2
Q ss_pred CCcCCCCCCCCCEEeccCCccccc-----------------CCccCC--CCCCCcEEEeecCcCCccCCccccCCCcCCE
Q 007553 60 IPSEIGSLRDLLELNLSYNILNGS-----------------IPLEFG--NLKDLYDLRLQGNKLDGLIPSSIGNLTNLTH 120 (599)
Q Consensus 60 ~~~~~~~l~~L~~L~L~~n~~~~~-----------------~p~~~~--~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~ 120 (599)
+|..++++++|++|+|++|.+++. +|..++ ++++|++|+|++|++.+.+|..|+++++|++
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCE
Confidence 455556666666666666666653 555555 6666666666666666556666666666666
Q ss_pred Eeeeccc-ccc-cCCccccCC------CcccEEecccCccCCCCcc--cccCCCCCCeeecccccccccCccccCCCCCC
Q 007553 121 LDLSLNQ-LSG-RLPQEVGNL------KNLVSLFLDNNNLTGPIPS--TLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNL 190 (599)
Q Consensus 121 L~l~~n~-i~~-~~~~~l~~l------~~L~~L~l~~n~i~~~~~~--~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L 190 (599)
|++++|. +++ .+|..+..+ ++|++|++++|.++ .+|. .+..+++|++|++++|.+.+.+| .+..+++|
T Consensus 278 L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L 355 (636)
T 4eco_A 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKL 355 (636)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEE
T ss_pred EECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCC
Confidence 6666665 555 455555544 56666666666665 4555 56666666666666666655555 55555666
Q ss_pred CEEEccCCcccccCchhccCCCC-CCEEeCCCCcCcccCcccCCCCC--CCCEEEccCCcCCCCCCcccC-------CCC
Q 007553 191 DSLLLNRNNLTGPIPSTIGFLNL-LDELRLSHNRLDGPIPPTIGNLT--YLTSLDLSSNQLSGLLPREVG-------NLK 260 (599)
Q Consensus 191 ~~L~l~~n~~~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~l~-------~l~ 260 (599)
++|++++|.+. .+|..+..++. |+.|++++|.++ .+|..+..++ +|++|++++|.+.+..|..+. .++
T Consensus 356 ~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~ 433 (636)
T 4eco_A 356 ASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGI 433 (636)
T ss_dssp SEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCC
T ss_pred CEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCC
Confidence 66666666655 45555555555 666666666655 4555544433 566666666666655555555 455
Q ss_pred CCCEEeccCcceeecCCc-CccCCCCCCEEECCCCCCccCCCcc-CcCC-------CCCCEEEcccCcCccCCCcccc--
Q 007553 261 YLDSLSLDRNNLIGPIPP-TIGYLTNLTSLNLGYNQLNSSIPPE-LMNC-------SQLQNLAVNHNSLSGSIPSEIG-- 329 (599)
Q Consensus 261 ~L~~L~L~~n~l~~~~~~-~~~~~~~L~~L~ls~n~~~~~~~~~-~~~l-------~~L~~L~l~~n~l~~~~~~~~~-- 329 (599)
+|+.|+|++|.+. .+|. .+..+++|++|++++|.++ .+|.. +... ++|+.|++++|.++ .+|..+.
T Consensus 434 ~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~ 510 (636)
T 4eco_A 434 NVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRAT 510 (636)
T ss_dssp CEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTT
T ss_pred CCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhc
Confidence 5666666666655 2332 2334556666666666655 33322 2211 15666666666655 4455444
Q ss_pred CCCCCCEEeCCCccccccCCcccCCCCCCCEEEC------CCCcCcccCCccCCC---CCeeecccCcc
Q 007553 330 NLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDV------SKNNLSGVIPKSVFR---VPGLKWSENNL 389 (599)
Q Consensus 330 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l------s~n~l~~~~~~~~~~---~~~l~~~~n~~ 389 (599)
.+++|+.|++++|++++ +|..+..+++|+.|++ ++|.+.+.+|..+.. ++.+++++|.+
T Consensus 511 ~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 511 TLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI 578 (636)
T ss_dssp TCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred cCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC
Confidence 55666666666666654 5555555566666665 334455555544332 35555555555
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-43 Score=397.01 Aligned_cols=385 Identities=24% Similarity=0.268 Sum_probs=259.9
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecC-CcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccc
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRI-PSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNG 82 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~-~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~ 82 (599)
.|.+..+...+|+++++|++|++++ +...+.+ |..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++
T Consensus 33 ~N~i~~i~~~~~~~l~~L~~LdLs~-n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~ 111 (844)
T 3j0a_A 33 FNYIRTVTASSFPFLEQLQLLELGS-QYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSD 111 (844)
T ss_dssp SCCCCEECSSSCSSCCSCSEEEECT-TCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSS
T ss_pred CCcCCccChhHCcccccCeEEeCCC-CCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCc
Confidence 3566777777888888888888887 6555555 6678888888888888888887778888888888888888888887
Q ss_pred cCCcc--CCCCCCCcEEEeecCcCCccCC-ccccCCCcCCEEeeecccccccCCccccCC--CcccEEecccCccCCCCc
Q 007553 83 SIPLE--FGNLKDLYDLRLQGNKLDGLIP-SSIGNLTNLTHLDLSLNQLSGRLPQEVGNL--KNLVSLFLDNNNLTGPIP 157 (599)
Q Consensus 83 ~~p~~--~~~l~~L~~L~L~~n~~~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l--~~L~~L~l~~n~i~~~~~ 157 (599)
..|.. |.++++|++|+|++|.+.+..+ ..|+++++|++|++++|.+.+..+..+..+ ++|+.|++++|.+.+..+
T Consensus 112 ~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~ 191 (844)
T 3j0a_A 112 AVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVS 191 (844)
T ss_dssp CCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCC
T ss_pred ccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccc
Confidence 55554 7888888888888888876644 568888888888888888876666655544 444444444444433322
Q ss_pred ccccCC--------------------------------------------------------------------CCCCee
Q 007553 158 STLYHL--------------------------------------------------------------------NQLSTL 169 (599)
Q Consensus 158 ~~l~~l--------------------------------------------------------------------~~L~~L 169 (599)
..+..+ ++|++|
T Consensus 192 ~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L 271 (844)
T 3j0a_A 192 VDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHL 271 (844)
T ss_dssp CCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEE
T ss_pred cchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEE
Confidence 222221 456666
Q ss_pred ecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCC
Q 007553 170 YLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLS 249 (599)
Q Consensus 170 ~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 249 (599)
++++|.+.+..+..|..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+..+..|..+++|++|++++|.+.
T Consensus 272 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 351 (844)
T 3j0a_A 272 DLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIA 351 (844)
T ss_dssp ECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCC
T ss_pred ECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCC
Confidence 66666666666666777777777777777777666777777777777777777777666777777777777777777777
Q ss_pred CCCCcccCCCCCCCEEeccCcceeecC------------------Cc----------------------CccCCCCCCEE
Q 007553 250 GLLPREVGNLKYLDSLSLDRNNLIGPI------------------PP----------------------TIGYLTNLTSL 289 (599)
Q Consensus 250 ~~~~~~l~~l~~L~~L~L~~n~l~~~~------------------~~----------------------~~~~~~~L~~L 289 (599)
+..+..|..+++|+.|+|++|.+++.. |. .+..+++|++|
T Consensus 352 ~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L 431 (844)
T 3j0a_A 352 IIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQIL 431 (844)
T ss_dssp CCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEE
T ss_pred ccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCcccee
Confidence 666666777777777777777665310 00 01244555666
Q ss_pred ECCCCCCccCCC------------------------------ccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeC
Q 007553 290 NLGYNQLNSSIP------------------------------PELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDL 339 (599)
Q Consensus 290 ~ls~n~~~~~~~------------------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 339 (599)
++++|++++..+ ..+..+++|+.|+|++|.+++..|..+..+++|+.|++
T Consensus 432 ~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 511 (844)
T 3j0a_A 432 ILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSL 511 (844)
T ss_dssp EEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEE
T ss_pred eCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeEC
Confidence 666555543211 22344455555666666665555555666666666666
Q ss_pred CCccccccCCcccCCCCCCCEEECCCCcCcccCCccCCCCCeeecccCccce
Q 007553 340 SHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVFRVPGLKWSENNLEV 391 (599)
Q Consensus 340 ~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~~~~l~~~~n~~~~ 391 (599)
++|++++..+..+. ++|+.|++++|.+++..|..+..+..+++++|++.+
T Consensus 512 s~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 512 NSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFIC 561 (844)
T ss_dssp ESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCC
T ss_pred CCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccc
Confidence 66666655444443 566666777777776666666666777777777765
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.1e-43 Score=380.98 Aligned_cols=402 Identities=21% Similarity=0.182 Sum_probs=290.0
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCccccc
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGS 83 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~ 83 (599)
.+.+..++...|+++++|++|++++ |.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+++.
T Consensus 41 ~n~l~~~~~~~~~~l~~L~~L~Ls~-n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 119 (606)
T 3vq2_A 41 FNPLKILKSYSFSNFSELQWLDLSR-CEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASL 119 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTT-CCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCS
T ss_pred CCCcCEeChhhccCCccCcEEeCCC-CcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccc
Confidence 3556667777777888888888887 777777777777788888888888887766677777888888888888877766
Q ss_pred CCccCCCCCCCcEEEeecCcCCc-cCCccccCCCcCCEEeeecccccccCCccccCCCccc----EEecccCccCCCCcc
Q 007553 84 IPLEFGNLKDLYDLRLQGNKLDG-LIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLV----SLFLDNNNLTGPIPS 158 (599)
Q Consensus 84 ~p~~~~~l~~L~~L~L~~n~~~~-~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~----~L~l~~n~i~~~~~~ 158 (599)
.+..|+++++|++|++++|.+.+ .+|..|+++++|++|++++|.+++..+..+..+++|+ +|++++|.+++..+.
T Consensus 120 ~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~ 199 (606)
T 3vq2_A 120 ESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQ 199 (606)
T ss_dssp SSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTT
T ss_pred cccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcc
Confidence 66677778888888888887765 3577777788888888888777766665554444333 344444443322211
Q ss_pred c-------------------------------------------------------------------------------
Q 007553 159 T------------------------------------------------------------------------------- 159 (599)
Q Consensus 159 ~------------------------------------------------------------------------------- 159 (599)
.
T Consensus 200 ~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~ 279 (606)
T 3vq2_A 200 AFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIV 279 (606)
T ss_dssp TTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGG
T ss_pred cccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccccccccccc
Confidence 1
Q ss_pred -----------------------ccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCE
Q 007553 160 -----------------------LYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDE 216 (599)
Q Consensus 160 -----------------------l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 216 (599)
+..+++|++|++++|.+ +.+| .+ .+++|++|++++|...+.. .+..+++|+.
T Consensus 280 ~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~ 354 (606)
T 3vq2_A 280 KFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSY 354 (606)
T ss_dssp SCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCE
T ss_pred ccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCE
Confidence 22223333444444443 2233 22 4444555555544332222 4567788999
Q ss_pred EeCCCCcCccc--CcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCC-cCccCCCCCCEEECCC
Q 007553 217 LRLSHNRLDGP--IPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIP-PTIGYLTNLTSLNLGY 293 (599)
Q Consensus 217 L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~ls~ 293 (599)
|++++|.+.+. .+..+..+++|++|++++|.+.+ +|..+..+++|+.|++++|.+.+..+ ..+..+++|++|++++
T Consensus 355 L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~ 433 (606)
T 3vq2_A 355 LDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISY 433 (606)
T ss_dssp EECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTT
T ss_pred EECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcC
Confidence 99999998865 36778889999999999999875 56788889999999999999988776 5788899999999999
Q ss_pred CCCccCCCccCcCCCCCCEEEcccCcCcc-CCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccC
Q 007553 294 NQLNSSIPPELMNCSQLQNLAVNHNSLSG-SIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVI 372 (599)
Q Consensus 294 n~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~ 372 (599)
|.+.+..|..+..+++|+.|++++|.+++ .+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+++..
T Consensus 434 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 513 (606)
T 3vq2_A 434 TNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLD 513 (606)
T ss_dssp SCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEE
T ss_pred CCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcC
Confidence 99988888888899999999999999887 46788888999999999999999888888889999999999999999887
Q ss_pred CccCCC---CCeeecccCccceeCCCCCCCCC-CCCcccccCCCC
Q 007553 373 PKSVFR---VPGLKWSENNLEVENPVISENAP-PPQTQHFKGNKG 413 (599)
Q Consensus 373 ~~~~~~---~~~l~~~~n~~~~~~~~~~~~~~-~~~~~~~~~~~~ 413 (599)
|..+.. ++.+++++|++...++. ....+ ......+.+|+.
T Consensus 514 ~~~~~~l~~L~~L~l~~N~l~~~p~~-~~~l~~~L~~l~l~~N~~ 557 (606)
T 3vq2_A 514 SSHYNQLYSLSTLDCSFNRIETSKGI-LQHFPKSLAFFNLTNNSV 557 (606)
T ss_dssp GGGTTTCTTCCEEECTTSCCCCEESC-GGGSCTTCCEEECCSCCC
T ss_pred HHHccCCCcCCEEECCCCcCcccCHh-HhhhcccCcEEEccCCCc
Confidence 876654 47888899988743332 11222 244455666654
No 8
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.2e-43 Score=382.11 Aligned_cols=354 Identities=19% Similarity=0.278 Sum_probs=315.6
Q ss_pred CCeecCCcccCCCCCCCEEEcccCcCccc-----------------CCcCCC--CCCCCCEEeccCCcccccCCccCCCC
Q 007553 31 FLSGRIPSETGALSRLKVLDLSYNRLTGT-----------------IPSEIG--SLRDLLELNLSYNILNGSIPLEFGNL 91 (599)
Q Consensus 31 ~~~~~~~~~~~~~~~L~~L~l~~n~~~~~-----------------~~~~~~--~l~~L~~L~L~~n~~~~~~p~~~~~l 91 (599)
.+++ +|+.++++++|++|+|++|.+++. +|..++ ++++|++|+|++|.+.+.+|..|+++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 3445 899999999999999999999975 999999 99999999999999999999999999
Q ss_pred CCCcEEEeecCc-CCc-cCCccccCC------CcCCEEeeecccccccCCc--cccCCCcccEEecccCccCCCCccccc
Q 007553 92 KDLYDLRLQGNK-LDG-LIPSSIGNL------TNLTHLDLSLNQLSGRLPQ--EVGNLKNLVSLFLDNNNLTGPIPSTLY 161 (599)
Q Consensus 92 ~~L~~L~L~~n~-~~~-~~~~~~~~l------~~L~~L~l~~n~i~~~~~~--~l~~l~~L~~L~l~~n~i~~~~~~~l~ 161 (599)
++|++|++++|+ +++ .+|..++.+ ++|++|++++|.++ .+|. .++++++|++|++++|.+++.+| .|.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999998 887 788888876 99999999999999 7887 89999999999999999998888 899
Q ss_pred CCCCCCeeecccccccccCccccCCCCC-CCEEEccCCcccccCchhccCCC--CCCEEeCCCCcCcccCcccCC-----
Q 007553 162 HLNQLSTLYLAYNNLVGPLPKEVGNLKN-LDSLLLNRNNLTGPIPSTIGFLN--LLDELRLSHNRLDGPIPPTIG----- 233 (599)
Q Consensus 162 ~l~~L~~L~l~~n~~~~~~~~~l~~l~~-L~~L~l~~n~~~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~----- 233 (599)
.+++|++|++++|.+. .+|..+..+++ |++|++++|.++ .+|..+..+. +|+.|++++|.+.+..|..+.
T Consensus 351 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~ 428 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPT 428 (636)
T ss_dssp EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSS
T ss_pred CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccc
Confidence 9999999999999998 77888999999 999999999998 7788777655 899999999999999988888
Q ss_pred --CCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCc-cCCC-------CCCEEECCCCCCccCCCcc
Q 007553 234 --NLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTI-GYLT-------NLTSLNLGYNQLNSSIPPE 303 (599)
Q Consensus 234 --~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~-~~~~-------~L~~L~ls~n~~~~~~~~~ 303 (599)
.+++|++|++++|.++...+..+..+++|+.|+|++|.++ .+|... .... +|++|++++|.++ .+|..
T Consensus 429 ~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~ 506 (636)
T 4eco_A 429 PFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDD 506 (636)
T ss_dssp CCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGG
T ss_pred cccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChh
Confidence 8889999999999999544445667999999999999998 555543 3232 9999999999998 67887
Q ss_pred Cc--CCCCCCEEEcccCcCccCCCccccCCCCCCEEeC------CCccccccCCcccCCCCCCCEEECCCCcCcccCCcc
Q 007553 304 LM--NCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDL------SHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKS 375 (599)
Q Consensus 304 ~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l------~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~ 375 (599)
+. .+++|+.|++++|.+++ +|..+..+++|+.|++ ++|++.+.+|..+..+++|+.|++++|.+ +.+|..
T Consensus 507 ~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~ 584 (636)
T 4eco_A 507 FRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK 584 (636)
T ss_dssp GSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC
T ss_pred hhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh
Confidence 76 99999999999999997 8899999999999999 56888889999999999999999999999 566665
Q ss_pred C-CCCCeeecccCccceeC
Q 007553 376 V-FRVPGLKWSENNLEVEN 393 (599)
Q Consensus 376 ~-~~~~~l~~~~n~~~~~~ 393 (599)
+ ..+..+++++|++....
T Consensus 585 ~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 585 ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp CCTTCCEEECCSCTTCEEE
T ss_pred HhCcCCEEECcCCCCcccc
Confidence 4 45688999999887644
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.3e-42 Score=375.22 Aligned_cols=398 Identities=22% Similarity=0.176 Sum_probs=321.5
Q ss_pred CcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccC
Q 007553 5 GNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSI 84 (599)
Q Consensus 5 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~ 84 (599)
+.++++|.. + .+++++|++++ +.+++..+..|+++++|++|++++|.+++..|.+|+++++|++|+|++|.+++..
T Consensus 21 ~~l~~ip~~-~--~~~l~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~ 96 (606)
T 3vq2_A 21 QKLSKVPDD-I--PSSTKNIDLSF-NPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFS 96 (606)
T ss_dssp SCCSSCCTT-S--CTTCCEEECTT-SCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCC
T ss_pred CCcccCCCC-C--CCCcCEEECCC-CCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccC
Confidence 456666653 2 37899999999 9999888889999999999999999999888999999999999999999999888
Q ss_pred CccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccc-cCCccccCCCcccEEecccCccCCCCcccccCC
Q 007553 85 PLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSG-RLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHL 163 (599)
Q Consensus 85 p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~-~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l 163 (599)
|..|+++++|++|++++|++.+..+..++++++|++|++++|.+.+ .+|..++++++|++|++++|.+++..+..|..+
T Consensus 97 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 176 (606)
T 3vq2_A 97 PGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFL 176 (606)
T ss_dssp TTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHH
T ss_pred hhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhh
Confidence 9999999999999999999998877889999999999999999986 569999999999999999999998777766655
Q ss_pred CCCC----eeecccccccccCccc--------------------------------------------------------
Q 007553 164 NQLS----TLYLAYNNLVGPLPKE-------------------------------------------------------- 183 (599)
Q Consensus 164 ~~L~----~L~l~~n~~~~~~~~~-------------------------------------------------------- 183 (599)
++|+ +|++++|.+.+..+..
T Consensus 177 ~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~ 256 (606)
T 3vq2_A 177 RENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIME 256 (606)
T ss_dssp HHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGT
T ss_pred hccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhh
Confidence 5443 5666665554332222
Q ss_pred ----------------------------------------------cCCCCCCCEEEccCCcccccCchhccCCCCCCEE
Q 007553 184 ----------------------------------------------VGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDEL 217 (599)
Q Consensus 184 ----------------------------------------------l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 217 (599)
+..+++|++|++++|.+ +.+| .+ .++.|+.|
T Consensus 257 ~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L 333 (606)
T 3vq2_A 257 GLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSL 333 (606)
T ss_dssp TGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEE
T ss_pred hhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccc-cC-CCCcccee
Confidence 22223344444444444 2333 22 44555555
Q ss_pred eCCCCcCcccCcccCCCCCCCCEEEccCCcCCCC--CCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCC
Q 007553 218 RLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGL--LPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQ 295 (599)
Q Consensus 218 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~ 295 (599)
++++|...+.. .+..+++|++|++++|.+++. .|..+..+++|+.|++++|.+.+ +|..+..+++|++|++++|.
T Consensus 334 ~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~ 410 (606)
T 3vq2_A 334 TLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHST 410 (606)
T ss_dssp EEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSE
T ss_pred eccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCc
Confidence 55555333222 466889999999999999875 47888999999999999999885 56789999999999999999
Q ss_pred CccCCC-ccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccc-cCCcccCCCCCCCEEECCCCcCcccCC
Q 007553 296 LNSSIP-PELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFING-TIPSQLGKIPNVSEVDVSKNNLSGVIP 373 (599)
Q Consensus 296 ~~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~L~~L~ls~n~l~~~~~ 373 (599)
+.+..| ..+..+++|+.|++++|.+.+..|..+..+++|++|++++|.+++ .+|..+..+++|+.|++++|.+++..|
T Consensus 411 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 490 (606)
T 3vq2_A 411 LKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISW 490 (606)
T ss_dssp EESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT
T ss_pred cCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccCh
Confidence 998877 678999999999999999999899999999999999999999997 478899999999999999999999988
Q ss_pred ccCCC---CCeeecccCccceeCCCCCCCCCCCCcccccCCC
Q 007553 374 KSVFR---VPGLKWSENNLEVENPVISENAPPPQTQHFKGNK 412 (599)
Q Consensus 374 ~~~~~---~~~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (599)
..+.. ++.+++++|++.+..|......+........+|.
T Consensus 491 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 532 (606)
T 3vq2_A 491 GVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNR 532 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSC
T ss_pred hhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCc
Confidence 76654 5889999999988766333434444444455544
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.1e-42 Score=382.64 Aligned_cols=321 Identities=22% Similarity=0.317 Sum_probs=186.7
Q ss_pred CCcCCCCCCCCCEEeccCCcccc-----------------cCCccCC--CCCCCcEEEeecCcCCccCCccccCCCcCCE
Q 007553 60 IPSEIGSLRDLLELNLSYNILNG-----------------SIPLEFG--NLKDLYDLRLQGNKLDGLIPSSIGNLTNLTH 120 (599)
Q Consensus 60 ~~~~~~~l~~L~~L~L~~n~~~~-----------------~~p~~~~--~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~ 120 (599)
+|..|+++++|++|+|++|.+++ .+|..++ ++++|++|+|++|.+.+.+|..|+++++|++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 55556666666666666666665 2566655 6666666666666666666666666666666
Q ss_pred Eeeeccc-ccc-cCCccccCCC-------cccEEecccCccCCCCcc--cccCCCCCCeeecccccccccCccccCCCCC
Q 007553 121 LDLSLNQ-LSG-RLPQEVGNLK-------NLVSLFLDNNNLTGPIPS--TLYHLNQLSTLYLAYNNLVGPLPKEVGNLKN 189 (599)
Q Consensus 121 L~l~~n~-i~~-~~~~~l~~l~-------~L~~L~l~~n~i~~~~~~--~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~ 189 (599)
|++++|+ +++ .+|..+..++ +|++|++++|.++ .+|. .|..+++|++|+|++|.+. .+| .+..+++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 6666665 555 4555444433 6666666666666 5555 5666666666666666666 455 5666666
Q ss_pred CCEEEccCCcccccCchhccCCCC-CCEEeCCCCcCcccCcccCCCCCC--CCEEEccCCcCCCCCCcc---cC--CCCC
Q 007553 190 LDSLLLNRNNLTGPIPSTIGFLNL-LDELRLSHNRLDGPIPPTIGNLTY--LTSLDLSSNQLSGLLPRE---VG--NLKY 261 (599)
Q Consensus 190 L~~L~l~~n~~~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~~---l~--~l~~ 261 (599)
|+.|++++|.+. .+|..+..++. |+.|++++|.+. .+|..+..++. |+.|++++|.+.+.+|.. +. .+++
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 666666666666 55555666666 666666666665 55555554433 666666666665543321 11 2235
Q ss_pred CCEEeccCcceeecCCcCc-cCCCCCCEEECCCCCCccCCCccCcC--------CCCCCEEEcccCcCccCCCcccc--C
Q 007553 262 LDSLSLDRNNLIGPIPPTI-GYLTNLTSLNLGYNQLNSSIPPELMN--------CSQLQNLAVNHNSLSGSIPSEIG--N 330 (599)
Q Consensus 262 L~~L~L~~n~l~~~~~~~~-~~~~~L~~L~ls~n~~~~~~~~~~~~--------l~~L~~L~l~~n~l~~~~~~~~~--~ 330 (599)
|+.|+|++|.+. .+|..+ ..+++|+.|+|++|.+. .+|..+.. +++|+.|+|++|.++ .+|..+. .
T Consensus 675 L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~ 751 (876)
T 4ecn_A 675 ASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATT 751 (876)
T ss_dssp EEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTT
T ss_pred cCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhcc
Confidence 666666666665 334332 35566666666666665 33332221 125666666666665 4555554 5
Q ss_pred CCCCCEEeCCCccccccCCcccCCCCCCCEEECCC------CcCcccCCccCCC---CCeeecccCcc
Q 007553 331 LIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSK------NNLSGVIPKSVFR---VPGLKWSENNL 389 (599)
Q Consensus 331 l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~------n~l~~~~~~~~~~---~~~l~~~~n~~ 389 (599)
+++|+.|++++|++++ +|..+..+++|+.|++++ |.+.+.+|..+.. ++.+++++|.+
T Consensus 752 l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 752 LPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp CTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred CCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 6666666666666664 455555666666666644 4555555544432 35555666665
No 11
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.6e-42 Score=360.05 Aligned_cols=366 Identities=20% Similarity=0.175 Sum_probs=317.3
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccC-CcCCCCCCCCCEEeccCCcccc
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTI-PSEIGSLRDLLELNLSYNILNG 82 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~-~~~~~~l~~L~~L~L~~n~~~~ 82 (599)
++.++++|. + .++|++|++++ +.+++..|..++++++|++|++++|.+.+.+ +..|.++++|++|+|++|.+++
T Consensus 19 ~~~l~~lp~--l--~~~l~~L~Ls~-n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~ 93 (455)
T 3v47_A 19 NRGLHQVPE--L--PAHVNYVDLSL-NSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQ 93 (455)
T ss_dssp SSCCSSCCC--C--CTTCCEEECCS-SCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCE
T ss_pred CCCcccCCC--C--CCccCEEEecC-CccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCc
Confidence 345666666 3 27899999999 9999888999999999999999999987554 5679999999999999999998
Q ss_pred cCCccCCCCCCCcEEEeecCcCCccCCcc--ccCCCcCCEEeeecccccccCCcc-ccCCCcccEEecccCccCCCCccc
Q 007553 83 SIPLEFGNLKDLYDLRLQGNKLDGLIPSS--IGNLTNLTHLDLSLNQLSGRLPQE-VGNLKNLVSLFLDNNNLTGPIPST 159 (599)
Q Consensus 83 ~~p~~~~~l~~L~~L~L~~n~~~~~~~~~--~~~l~~L~~L~l~~n~i~~~~~~~-l~~l~~L~~L~l~~n~i~~~~~~~ 159 (599)
..|..|.++++|++|++++|++.+..+.. |..+++|++|++++|.+.+..|.. +.++++|++|++++|.+++..+..
T Consensus 94 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 173 (455)
T 3v47_A 94 LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEED 173 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTT
T ss_pred cChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhh
Confidence 88999999999999999999998755444 899999999999999999887766 899999999999999999888887
Q ss_pred ccCC--CCCCeeecccccccccCccc--------cCCCCCCCEEEccCCcccccCchhccCC---CCCCEEeCCCCcCcc
Q 007553 160 LYHL--NQLSTLYLAYNNLVGPLPKE--------VGNLKNLDSLLLNRNNLTGPIPSTIGFL---NLLDELRLSHNRLDG 226 (599)
Q Consensus 160 l~~l--~~L~~L~l~~n~~~~~~~~~--------l~~l~~L~~L~l~~n~~~~~~~~~~~~l---~~L~~L~l~~n~l~~ 226 (599)
+..+ .+|+.|++++|.+.+..+.. +..+++|++|++++|.+.+..+..+... +.|+.|++++|...+
T Consensus 174 l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 253 (455)
T 3v47_A 174 LLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG 253 (455)
T ss_dssp SGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTS
T ss_pred hhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccc
Confidence 7766 68999999999988654433 3366899999999999988777666443 889999999886654
Q ss_pred cC----------cccCC--CCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCC
Q 007553 227 PI----------PPTIG--NLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYN 294 (599)
Q Consensus 227 ~~----------~~~~~--~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n 294 (599)
.. +..+. ..++|++|++++|.+.+..|..+..+++|+.|++++|.+.+..+..+..+++|++|++++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 333 (455)
T 3v47_A 254 SSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN 333 (455)
T ss_dssp CCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCC
Confidence 31 11222 2368999999999999988999999999999999999999888889999999999999999
Q ss_pred CCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCc
Q 007553 295 QLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPK 374 (599)
Q Consensus 295 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~ 374 (599)
.+.+..|..+..+++|+.|++++|.+++..|..+..+++|++|++++|++++..+..+..+++|+.|++++|+++|.+|.
T Consensus 334 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 334 FLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 99988888899999999999999999988889999999999999999999977777788999999999999999998873
No 12
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.4e-42 Score=369.81 Aligned_cols=402 Identities=22% Similarity=0.229 Sum_probs=241.7
Q ss_pred CcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccC
Q 007553 5 GNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSI 84 (599)
Q Consensus 5 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~ 84 (599)
+.++.++..+|.++++|++|++++ +.+.+..|..|+++++|++|++++|.+++..|..|+++++|++|++++|.+++..
T Consensus 38 n~l~~~~~~~~~~l~~L~~L~Ls~-n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 116 (570)
T 2z63_A 38 NPLRHLGSYSFFSFPELQVLDLSR-CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 116 (570)
T ss_dssp CCCCEECTTTTTTCSSCCEEECTT-CCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCST
T ss_pred CccCccChhHhhCCCCceEEECCC-CcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCC
Confidence 445556656666666666666666 5666555556666666666666666666555566666666666666666666544
Q ss_pred CccCCCCCCCcEEEeecCcCCcc-CCccccCCCcCCEEeeecccccccCCccccCCCcc----cEEecccCccCCCCccc
Q 007553 85 PLEFGNLKDLYDLRLQGNKLDGL-IPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNL----VSLFLDNNNLTGPIPST 159 (599)
Q Consensus 85 p~~~~~l~~L~~L~L~~n~~~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L----~~L~l~~n~i~~~~~~~ 159 (599)
+..|+++++|++|++++|.+.+. +|..|+++++|++|++++|.+.+..+..+..+++| +.|++++|.+.+..+..
T Consensus 117 ~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~ 196 (570)
T 2z63_A 117 NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA 196 (570)
T ss_dssp TCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTT
T ss_pred CccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHH
Confidence 44566666666666666666542 46666666666666666666665555555555555 55666655554433332
Q ss_pred ccCCCCCCeeecccc----------------------------------------------------------cccccCc
Q 007553 160 LYHLNQLSTLYLAYN----------------------------------------------------------NLVGPLP 181 (599)
Q Consensus 160 l~~l~~L~~L~l~~n----------------------------------------------------------~~~~~~~ 181 (599)
+... +|+.|++++| .+.+..+
T Consensus 197 ~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~ 275 (570)
T 2z63_A 197 FKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDII 275 (570)
T ss_dssp TTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCST
T ss_pred hccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhch
Confidence 2221 2333332222 1111122
Q ss_pred cccCCCCCCCEEEccCCcccccCchhccC--------------------CCCCCEEeCCCCcCcccCcccCCCCCCCCEE
Q 007553 182 KEVGNLKNLDSLLLNRNNLTGPIPSTIGF--------------------LNLLDELRLSHNRLDGPIPPTIGNLTYLTSL 241 (599)
Q Consensus 182 ~~l~~l~~L~~L~l~~n~~~~~~~~~~~~--------------------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 241 (599)
..+..+++|++|++++|.+. .+|..+.. ++.|+.|++++|.+.+..+. ..+++|++|
T Consensus 276 ~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L 352 (570)
T 2z63_A 276 DLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFL 352 (570)
T ss_dssp TTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC--CBCTTCCEE
T ss_pred hhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccc--ccCCCCCEE
Confidence 23333444444444444443 23333333 33444444444443333222 566777888
Q ss_pred EccCCcCCCCC--CcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCC-ccCcCCCCCCEEEcccC
Q 007553 242 DLSSNQLSGLL--PREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIP-PELMNCSQLQNLAVNHN 318 (599)
Q Consensus 242 ~l~~n~l~~~~--~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~-~~~~~l~~L~~L~l~~n 318 (599)
++++|.+++.. +..+..+++|+.|++++|.+.+..+. +..+++|++|++++|.+.+..+ ..+..+++|+.|++++|
T Consensus 353 ~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n 431 (570)
T 2z63_A 353 DLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 431 (570)
T ss_dssp ECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTS
T ss_pred eCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCC
Confidence 88877776543 55667777788888887777654433 7777777777777777776554 45677777777777777
Q ss_pred cCccCCCccccCCCCCCEEeCCCcccc-ccCCcccCCCCCCCEEECCCCcCcccCCccCCC---CCeeecccCccceeCC
Q 007553 319 SLSGSIPSEIGNLIHLRQLDLSHNFIN-GTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVFR---VPGLKWSENNLEVENP 394 (599)
Q Consensus 319 ~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~---~~~l~~~~n~~~~~~~ 394 (599)
.+.+..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++..|..+.. ++.+++++|.+.+..+
T Consensus 432 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 511 (570)
T 2z63_A 432 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPD 511 (570)
T ss_dssp CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCH
Confidence 777777777777777777777777776 467777777777777777777777776665543 4667777777766554
Q ss_pred CCCCCCCCCCcccccCCC
Q 007553 395 VISENAPPPQTQHFKGNK 412 (599)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~ 412 (599)
......+......+.+|+
T Consensus 512 ~~~~~l~~L~~L~l~~N~ 529 (570)
T 2z63_A 512 GIFDRLTSLQKIWLHTNP 529 (570)
T ss_dssp TTTTTCTTCCEEECCSSC
T ss_pred HHhhcccCCcEEEecCCc
Confidence 322333344444455554
No 13
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.9e-41 Score=369.70 Aligned_cols=387 Identities=22% Similarity=0.217 Sum_probs=225.3
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCccccc
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGS 83 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~ 83 (599)
.+.+..++...|+++++|++|++++ +.+.+..|..++++++|++|+|++|.+++..+.+|+++++|++|+|++|.+++.
T Consensus 34 ~n~l~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~ 112 (680)
T 1ziw_A 34 HNQLRRLPAANFTRYSQLTSLDVGF-NTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI 112 (680)
T ss_dssp SSCCCCCCGGGGGGGTTCSEEECCS-SCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred CCCCCCcCHHHHhCCCcCcEEECCC-CccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCcc
Confidence 3556777777788888888888887 777777777778888888888888888755555688888888888888888766
Q ss_pred CCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCcccc--CCCcccEEecccCccCCCCccccc
Q 007553 84 IPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVG--NLKNLVSLFLDNNNLTGPIPSTLY 161 (599)
Q Consensus 84 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~--~l~~L~~L~l~~n~i~~~~~~~l~ 161 (599)
.|..|+++++|++|++++|.+.+..|..+.++++|++|++++|.+++..+..+. .+++|++|++++|.+++..|..+.
T Consensus 113 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~ 192 (680)
T 1ziw_A 113 KNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFH 192 (680)
T ss_dssp CSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGG
T ss_pred ChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhh
Confidence 667788888888888888888777777777888888888888877766555443 456777777777777665554443
Q ss_pred CC---------------------------CCCCeeecccccccccCccccCCCCC--CCEEEccCCcccccCchhccCCC
Q 007553 162 HL---------------------------NQLSTLYLAYNNLVGPLPKEVGNLKN--LDSLLLNRNNLTGPIPSTIGFLN 212 (599)
Q Consensus 162 ~l---------------------------~~L~~L~l~~n~~~~~~~~~l~~l~~--L~~L~l~~n~~~~~~~~~~~~l~ 212 (599)
.+ ++|++|++++|.+.+..+..+..++. |++|++++|.+.+..+..+..++
T Consensus 193 ~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (680)
T 1ziw_A 193 AIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLP 272 (680)
T ss_dssp GSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcc
Confidence 32 23444444444444444444444432 55555555555554455555555
Q ss_pred CCCEEeCCCCcCcccCcccCCCC---------------------------------CCCCEEEccCCcCCCCCCcccCCC
Q 007553 213 LLDELRLSHNRLDGPIPPTIGNL---------------------------------TYLTSLDLSSNQLSGLLPREVGNL 259 (599)
Q Consensus 213 ~L~~L~l~~n~l~~~~~~~~~~l---------------------------------~~L~~L~l~~n~l~~~~~~~l~~l 259 (599)
+|+.|++++|.+.+..+..+..+ ++|++|++++|.+.+..+..+..+
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 352 (680)
T 1ziw_A 273 QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGL 352 (680)
T ss_dssp TCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTC
T ss_pred cccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccc
Confidence 55555555555554444444444 444444444444444444444444
Q ss_pred CCCCEEeccCcceeec--CCcCccC--CCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCC-ccccCCCCC
Q 007553 260 KYLDSLSLDRNNLIGP--IPPTIGY--LTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIP-SEIGNLIHL 334 (599)
Q Consensus 260 ~~L~~L~L~~n~l~~~--~~~~~~~--~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L 334 (599)
++|++|++++|.+... ....+.. .++|+.|++++|++.+..|..+..+++|+.|++++|.+.+.+| ..+.++++|
T Consensus 353 ~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 432 (680)
T 1ziw_A 353 INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENI 432 (680)
T ss_dssp TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTC
T ss_pred cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccc
Confidence 4444444444332111 0011111 1234444444444444445555555555566665555554333 345555555
Q ss_pred CEEeCCCccccccCCcccCCCCCCCEEECCCCcCc--ccCCccCCC---CCeeecccCccce
Q 007553 335 RQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLS--GVIPKSVFR---VPGLKWSENNLEV 391 (599)
Q Consensus 335 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~--~~~~~~~~~---~~~l~~~~n~~~~ 391 (599)
++|++++|++++..+..+..+++|+.|++++|.++ +..|..+.. ++.+++++|.+..
T Consensus 433 ~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 494 (680)
T 1ziw_A 433 FEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIAN 494 (680)
T ss_dssp CEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCC
T ss_pred cEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCc
Confidence 55555555555444444444444555555544443 223333322 2445555555543
No 14
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=380.05 Aligned_cols=386 Identities=25% Similarity=0.273 Sum_probs=276.5
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccC-CcCCCCCCCCCEEeccCCcccc
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTI-PSEIGSLRDLLELNLSYNILNG 82 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~-~~~~~~l~~L~~L~L~~n~~~~ 82 (599)
.++.+.+|. -.+++++|++++ |.+++..|..|..+++|++|+|++|.+.+.+ |.+|+++++|++|+|++|.+.+
T Consensus 13 ~~~L~~vP~----lp~~l~~LdLs~-N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~ 87 (844)
T 3j0a_A 13 FCNLTQVPQ----VLNTTERLLLSF-NYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYF 87 (844)
T ss_dssp CCCSSCCCS----SCTTCCEEEEES-CCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCE
T ss_pred CCCCCCCCC----CCCCcCEEECCC-CcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcc
Confidence 356677776 458999999999 9999889999999999999999999655455 7889999999999999999999
Q ss_pred cCCccCCCCCCCcEEEeecCcCCccCCcc--ccCCCcCCEEeeecccccccCC-ccccCCCcccEEecccCccCCCCccc
Q 007553 83 SIPLEFGNLKDLYDLRLQGNKLDGLIPSS--IGNLTNLTHLDLSLNQLSGRLP-QEVGNLKNLVSLFLDNNNLTGPIPST 159 (599)
Q Consensus 83 ~~p~~~~~l~~L~~L~L~~n~~~~~~~~~--~~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~l~~n~i~~~~~~~ 159 (599)
..|..|.++++|++|+|++|.+.+..|.. |.++++|++|++++|.+.+..+ ..++++++|++|++++|.+++..+..
T Consensus 88 ~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~ 167 (844)
T 3j0a_A 88 LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHE 167 (844)
T ss_dssp ECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGG
T ss_pred cCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHH
Confidence 99999999999999999999998766654 9999999999999999987754 57999999999999999999988888
Q ss_pred ccCC--CCCCeeecccccccccCccccCCCCC------CCEEEccCC---------------------------------
Q 007553 160 LYHL--NQLSTLYLAYNNLVGPLPKEVGNLKN------LDSLLLNRN--------------------------------- 198 (599)
Q Consensus 160 l~~l--~~L~~L~l~~n~~~~~~~~~l~~l~~------L~~L~l~~n--------------------------------- 198 (599)
+..+ ++|+.|+++.|.+.+..+..+..+++ |+.|++++|
T Consensus 168 l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~ 247 (844)
T 3j0a_A 168 LEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGF 247 (844)
T ss_dssp GHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSS
T ss_pred cccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccc
Confidence 8877 88999999998887766554444333 555555555
Q ss_pred -----------------------------cccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCC
Q 007553 199 -----------------------------NLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLS 249 (599)
Q Consensus 199 -----------------------------~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 249 (599)
.+.+..+..+..++.|+.|++++|.+.+..+..|..+++|++|++++|.++
T Consensus 248 ~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 327 (844)
T 3j0a_A 248 GFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG 327 (844)
T ss_dssp SCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCS
T ss_pred cccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCC
Confidence 444333444455555555555555555555555555555566666555555
Q ss_pred CCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCC------------------Cc---------
Q 007553 250 GLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSI------------------PP--------- 302 (599)
Q Consensus 250 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~------------------~~--------- 302 (599)
+..|..+..+++|+.|++++|.+.+..+..|..+++|++|++++|.+++.. |.
T Consensus 328 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ 407 (844)
T 3j0a_A 328 ELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIH 407 (844)
T ss_dssp CCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEE
T ss_pred ccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceee
Confidence 555555555566666666666555444445555566666666555544210 00
Q ss_pred -------------cCcCCCCCCEEEcccCcCccCC------------------------------CccccCCCCCCEEeC
Q 007553 303 -------------ELMNCSQLQNLAVNHNSLSGSI------------------------------PSEIGNLIHLRQLDL 339 (599)
Q Consensus 303 -------------~~~~l~~L~~L~l~~n~l~~~~------------------------------~~~~~~l~~L~~L~l 339 (599)
.+..+++|+.|++++|.+++.. +..+..+++|+.|++
T Consensus 408 ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~L 487 (844)
T 3j0a_A 408 LSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYL 487 (844)
T ss_dssp CCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCC
T ss_pred cccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEEC
Confidence 0113445555555555444211 123445566777777
Q ss_pred CCccccccCCcccCCCCCCCEEECCCCcCcccCCccCC-CCCeeecccCccceeCC
Q 007553 340 SHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVF-RVPGLKWSENNLEVENP 394 (599)
Q Consensus 340 ~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~-~~~~l~~~~n~~~~~~~ 394 (599)
++|.+++..|..+..+++|+.|++++|.+++..+..+. .+..+++++|.+.+..|
T Consensus 488 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~ 543 (844)
T 3j0a_A 488 NHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNP 543 (844)
T ss_dssp CHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCS
T ss_pred CCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCCh
Confidence 77777767777777888888888888888877665543 45778888888877655
No 15
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.8e-40 Score=364.81 Aligned_cols=364 Identities=25% Similarity=0.271 Sum_probs=209.8
Q ss_pred CcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccC
Q 007553 5 GNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSI 84 (599)
Q Consensus 5 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~ 84 (599)
+.+..+....|+++++|++|++++ |.+++..+..|+.+++|++|++++|.+++..|..|+++++|++|++++|.+++..
T Consensus 59 n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 137 (680)
T 1ziw_A 59 NTISKLEPELCQKLPMLKVLNLQH-NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTK 137 (680)
T ss_dssp SCCCCCCTTHHHHCTTCCEEECCS-SCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCC
T ss_pred CccCccCHHHHhcccCcCEEECCC-CccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccC
Confidence 456667777778888888888887 7776444446778888888888888887666677888888888888888887777
Q ss_pred CccCCCCCCCcEEEeecCcCCccCCcccc--CCCcCCEEeeecccccccCCc----------------------------
Q 007553 85 PLEFGNLKDLYDLRLQGNKLDGLIPSSIG--NLTNLTHLDLSLNQLSGRLPQ---------------------------- 134 (599)
Q Consensus 85 p~~~~~l~~L~~L~L~~n~~~~~~~~~~~--~l~~L~~L~l~~n~i~~~~~~---------------------------- 134 (599)
|..|.++++|++|++++|.+.+..+..+. .+++|++|++++|.+.+..|.
T Consensus 138 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~ 217 (680)
T 1ziw_A 138 LGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCL 217 (680)
T ss_dssp CCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHH
T ss_pred chhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHH
Confidence 77777788888888888777665554433 345666666666655544443
Q ss_pred -----------------------cccCCCc--ccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCC
Q 007553 135 -----------------------EVGNLKN--LVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKN 189 (599)
Q Consensus 135 -----------------------~l~~l~~--L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~ 189 (599)
.+.+++. |++|++++|.+++..+..|..+++|++|++++|.+.+..+..+..+++
T Consensus 218 ~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 297 (680)
T 1ziw_A 218 ELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFN 297 (680)
T ss_dssp HHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTT
T ss_pred HhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCC
Confidence 3333322 666666666666555556666666666666666665554444444444
Q ss_pred CCEEEccCCcccc-----cCc----hhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEc-----------------
Q 007553 190 LDSLLLNRNNLTG-----PIP----STIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDL----------------- 243 (599)
Q Consensus 190 L~~L~l~~n~~~~-----~~~----~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l----------------- 243 (599)
|++|++++|...+ .+| ..+..+++|+.|++++|.+.+..+..|..+++|++|++
T Consensus 298 L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~ 377 (680)
T 1ziw_A 298 VRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVS 377 (680)
T ss_dssp CCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGG
T ss_pred ccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcc
Confidence 4444443332211 011 13344455555555555555444444444444444433
Q ss_pred -----------cCCcCCCCCCcccCCCCCCCEEeccCcceeecCC-cCccCCCCCCEEECCCCCCccCCCccCcCCCCCC
Q 007553 244 -----------SSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIP-PTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQ 311 (599)
Q Consensus 244 -----------~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~ 311 (599)
++|.+++..|..+..+++|+.|++++|.+.+.++ ..+..+++|++|++++|.+.+..+..+..+++|+
T Consensus 378 ~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~ 457 (680)
T 1ziw_A 378 LAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQ 457 (680)
T ss_dssp GTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCC
T ss_pred cccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccc
Confidence 3334444445556666666666666666665544 3455666666666666665544444444444445
Q ss_pred EEEcccCcCc--cCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCc
Q 007553 312 NLAVNHNSLS--GSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLS 369 (599)
Q Consensus 312 ~L~l~~n~l~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~ 369 (599)
.|++++|.+. +..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|.++
T Consensus 458 ~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~ 517 (680)
T 1ziw_A 458 RLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA 517 (680)
T ss_dssp EEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCG
T ss_pred cchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCcc
Confidence 5544444443 233444444444444444444444444444444444444444444444
No 16
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.7e-41 Score=373.72 Aligned_cols=348 Identities=19% Similarity=0.291 Sum_probs=304.2
Q ss_pred CCcccCCCCCCCEEEcccCcCcc-----------------cCCcCCC--CCCCCCEEeccCCcccccCCccCCCCCCCcE
Q 007553 36 IPSETGALSRLKVLDLSYNRLTG-----------------TIPSEIG--SLRDLLELNLSYNILNGSIPLEFGNLKDLYD 96 (599)
Q Consensus 36 ~~~~~~~~~~L~~L~l~~n~~~~-----------------~~~~~~~--~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 96 (599)
+|+.++++++|++|+|++|.+++ .+|..++ ++++|++|+|++|.+.+.+|..|.++++|++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 88889999999999999999997 3899888 9999999999999999999999999999999
Q ss_pred EEeecCc-CCc-cCCccccCCC-------cCCEEeeecccccccCCc--cccCCCcccEEecccCccCCCCcccccCCCC
Q 007553 97 LRLQGNK-LDG-LIPSSIGNLT-------NLTHLDLSLNQLSGRLPQ--EVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQ 165 (599)
Q Consensus 97 L~L~~n~-~~~-~~~~~~~~l~-------~L~~L~l~~n~i~~~~~~--~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 165 (599)
|+|++|+ +++ .+|..++.++ +|++|++++|.+. .+|. .+.++++|++|++++|.++ .+| .|..+++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 9999998 887 6787676665 9999999999999 7887 8999999999999999998 777 8999999
Q ss_pred CCeeecccccccccCccccCCCCC-CCEEEccCCcccccCchhccCCCC--CCEEeCCCCcCcccCccc---CC--CCCC
Q 007553 166 LSTLYLAYNNLVGPLPKEVGNLKN-LDSLLLNRNNLTGPIPSTIGFLNL--LDELRLSHNRLDGPIPPT---IG--NLTY 237 (599)
Q Consensus 166 L~~L~l~~n~~~~~~~~~l~~l~~-L~~L~l~~n~~~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~~---~~--~l~~ 237 (599)
|+.|+|++|.+. .+|..+..+++ |++|++++|.+. .+|..+..+.. |+.|++++|.+.+.+|.. +. .+++
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 999999999998 78888999999 999999999998 67887777654 999999999999876532 22 3458
Q ss_pred CCEEEccCCcCCCCCCcc-cCCCCCCCEEeccCcceeecCCcCccCC--------CCCCEEECCCCCCccCCCccCc--C
Q 007553 238 LTSLDLSSNQLSGLLPRE-VGNLKYLDSLSLDRNNLIGPIPPTIGYL--------TNLTSLNLGYNQLNSSIPPELM--N 306 (599)
Q Consensus 238 L~~L~l~~n~l~~~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~~~~~--------~~L~~L~ls~n~~~~~~~~~~~--~ 306 (599)
|+.|++++|.++. +|.. +..+++|+.|+|++|.+. .+|..+... ++|+.|+|++|+++ .+|..+. .
T Consensus 675 L~~L~Ls~N~L~~-lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~ 751 (876)
T 4ecn_A 675 ASTVTLSYNEIQK-FPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATT 751 (876)
T ss_dssp EEEEECCSSCCCS-CCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTT
T ss_pred cCEEEccCCcCCc-cCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhcc
Confidence 9999999999994 5555 458899999999999998 666554332 38999999999998 6788876 8
Q ss_pred CCCCCEEEcccCcCccCCCccccCCCCCCEEeCCC------ccccccCCcccCCCCCCCEEECCCCcCcccCCccCC-CC
Q 007553 307 CSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSH------NFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVF-RV 379 (599)
Q Consensus 307 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~------n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~-~~ 379 (599)
+++|+.|+|++|.+++ +|..+..+++|+.|++++ |.+.+.+|..+..+++|+.|++++|.+ +.+|..+. .+
T Consensus 752 l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~~L 829 (876)
T 4ecn_A 752 LPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLTPQL 829 (876)
T ss_dssp CTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCSSS
T ss_pred CCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhcCCC
Confidence 9999999999999997 788899999999999976 788889999999999999999999999 66776543 46
Q ss_pred CeeecccCccceeC
Q 007553 380 PGLKWSENNLEVEN 393 (599)
Q Consensus 380 ~~l~~~~n~~~~~~ 393 (599)
..+++++|++....
T Consensus 830 ~~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 830 YILDIADNPNISID 843 (876)
T ss_dssp CEEECCSCTTCEEE
T ss_pred CEEECCCCCCCccC
Confidence 88999999876544
No 17
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=358.83 Aligned_cols=397 Identities=22% Similarity=0.221 Sum_probs=330.0
Q ss_pred cccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCC
Q 007553 6 NAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIP 85 (599)
Q Consensus 6 ~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p 85 (599)
+.+++|. .+ .+++++|++++ +.+++..+..|..+++|++|++++|.+++..|..|+++++|++|+|++|.+++..|
T Consensus 18 ~l~~ip~-~l--~~~l~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 93 (570)
T 2z63_A 18 NFYKIPD-NL--PFSTKNLDLSF-NPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLAL 93 (570)
T ss_dssp CCSSCCS-SS--CSSCCEEECCS-CCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECT
T ss_pred CccccCC-Cc--cccccEEEccC-CccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCH
Confidence 4556665 22 36799999999 99998888899999999999999999998888899999999999999999998888
Q ss_pred ccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccc-cCCccccCCCcccEEecccCccCCCCcccccCCC
Q 007553 86 LEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSG-RLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLN 164 (599)
Q Consensus 86 ~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~-~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 164 (599)
..|.++++|++|++++|++.+..+..++++++|++|++++|.+.+ .+|..+.++++|++|++++|.+++..+..+..++
T Consensus 94 ~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 173 (570)
T 2z63_A 94 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 173 (570)
T ss_dssp TTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHH
T ss_pred hhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchh
Confidence 999999999999999999997766679999999999999999987 3689999999999999999999988888888888
Q ss_pred CC----CeeecccccccccCccccCCCCCCCEEEccCC------------------------------------------
Q 007553 165 QL----STLYLAYNNLVGPLPKEVGNLKNLDSLLLNRN------------------------------------------ 198 (599)
Q Consensus 165 ~L----~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n------------------------------------------ 198 (599)
+| +.|++++|.+.+..+..+... +|+.|++++|
T Consensus 174 ~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~ 252 (570)
T 2z63_A 174 QMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALE 252 (570)
T ss_dssp TCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTG
T ss_pred ccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhc
Confidence 88 899999999998777777655 7888887776
Q ss_pred ----------------cccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcc-c-----
Q 007553 199 ----------------NLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPRE-V----- 256 (599)
Q Consensus 199 ----------------~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-l----- 256 (599)
.+.+..+..+..+++|+.|++++|.+. .+|..+..+ +|++|++++|.+.. +|.. +
T Consensus 253 ~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~-l~~~~l~~L~~ 329 (570)
T 2z63_A 253 GLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQ-FPTLKLKSLKR 329 (570)
T ss_dssp GGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSS-CCBCBCSSCCE
T ss_pred cccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccc-cCcccccccCE
Confidence 223345566777899999999999987 567777766 77777777776652 3221 1
Q ss_pred --------------CCCCCCCEEeccCcceeecC--CcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcC
Q 007553 257 --------------GNLKYLDSLSLDRNNLIGPI--PPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSL 320 (599)
Q Consensus 257 --------------~~l~~L~~L~L~~n~l~~~~--~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l 320 (599)
..+++|+.|++++|.+.+.. +..+..+++|++|++++|.+.+..+ .+..+++|+.|++++|.+
T Consensus 330 L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l 408 (570)
T 2z63_A 330 LTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNL 408 (570)
T ss_dssp EEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEE
T ss_pred EeCcCCccccccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCcc
Confidence 56789999999999988653 6678889999999999999986544 488999999999999999
Q ss_pred ccCCC-ccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCc-ccCCccCC---CCCeeecccCccceeCCC
Q 007553 321 SGSIP-SEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLS-GVIPKSVF---RVPGLKWSENNLEVENPV 395 (599)
Q Consensus 321 ~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~-~~~~~~~~---~~~~l~~~~n~~~~~~~~ 395 (599)
.+..+ ..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.++ +..|..+. .++.+++++|.+.+..|.
T Consensus 409 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 488 (570)
T 2z63_A 409 KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488 (570)
T ss_dssp ESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred ccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChh
Confidence 87766 57889999999999999999999999999999999999999998 56776554 458889999999887664
Q ss_pred CCCCCCCCCcccccCC
Q 007553 396 ISENAPPPQTQHFKGN 411 (599)
Q Consensus 396 ~~~~~~~~~~~~~~~~ 411 (599)
.....+......+.++
T Consensus 489 ~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 489 AFNSLSSLQVLNMASN 504 (570)
T ss_dssp TTTTCTTCCEEECCSS
T ss_pred hhhcccCCCEEeCCCC
Confidence 3333444444444444
No 18
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.2e-40 Score=356.50 Aligned_cols=394 Identities=22% Similarity=0.202 Sum_probs=268.8
Q ss_pred CcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccC
Q 007553 5 GNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSI 84 (599)
Q Consensus 5 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~ 84 (599)
+.++++|..- .++|++|++++ +.+++..|..++.+++|++|++++|.+++..|.+|+.+++|++|+|++|.+++..
T Consensus 15 ~~l~~ip~~~---~~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 90 (549)
T 2z81_A 15 RSFTSIPSGL---TAAMKSLDLSF-NKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLS 90 (549)
T ss_dssp SCCSSCCSCC---CTTCCEEECCS-SCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCC
T ss_pred CccccccccC---CCCccEEECcC-CccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccC
Confidence 4566666632 26788888888 7787777778888888888888888888777778888888888888888888766
Q ss_pred CccCCCCCCCcEEEeecCcCCcc-CCccccCCCcCCEEeeeccc-ccccCCccccCCCcccEEecccCccCCCCcccccC
Q 007553 85 PLEFGNLKDLYDLRLQGNKLDGL-IPSSIGNLTNLTHLDLSLNQ-LSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYH 162 (599)
Q Consensus 85 p~~~~~l~~L~~L~L~~n~~~~~-~~~~~~~l~~L~~L~l~~n~-i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~ 162 (599)
|..|+++++|++|++++|++.+. .|..++++++|++|++++|. +....+..+.++++|++|++++|.+++..|..+..
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 66688888888888888888753 45678888888888888887 44334457888888888888888888777777766
Q ss_pred CCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccC---------------------------c----hh----
Q 007553 163 LNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPI---------------------------P----ST---- 207 (599)
Q Consensus 163 l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~---------------------------~----~~---- 207 (599)
+++|++|+++.|.+.......+..+++|++|++++|.+.+.. + ..
T Consensus 171 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~ 250 (549)
T 2z81_A 171 IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYI 250 (549)
T ss_dssp CSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGC
T ss_pred cccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhh
Confidence 666666666555543221111233445555555544443310 0 00
Q ss_pred -------------------------------------------------------ccCCCCCCEEeCCCCcCcccCcccC
Q 007553 208 -------------------------------------------------------IGFLNLLDELRLSHNRLDGPIPPTI 232 (599)
Q Consensus 208 -------------------------------------------------------~~~l~~L~~L~l~~n~l~~~~~~~~ 232 (599)
+.....|+.|++++|.+. .+|..+
T Consensus 251 ~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~ 329 (549)
T 2z81_A 251 LELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSF 329 (549)
T ss_dssp TTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHH
T ss_pred ccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHH
Confidence 011134555555555554 344333
Q ss_pred -CCCCCCCEEEccCCcCCCCCC---cccCCCCCCCEEeccCcceeecCC--cCccCCCCCCEEECCCCCCccCCCccCcC
Q 007553 233 -GNLTYLTSLDLSSNQLSGLLP---REVGNLKYLDSLSLDRNNLIGPIP--PTIGYLTNLTSLNLGYNQLNSSIPPELMN 306 (599)
Q Consensus 233 -~~l~~L~~L~l~~n~l~~~~~---~~l~~l~~L~~L~L~~n~l~~~~~--~~~~~~~~L~~L~ls~n~~~~~~~~~~~~ 306 (599)
..+++|++|++++|.+.+..| ..++.+++|+.|++++|.+++..+ ..+..+++|++|++++|+++ .+|..+..
T Consensus 330 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 408 (549)
T 2z81_A 330 SQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQW 408 (549)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCC
T ss_pred HhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcc
Confidence 467888888888888887553 336778888888888888875422 34677888888888888887 57777788
Q ss_pred CCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCcc--CCCCCeeec
Q 007553 307 CSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKS--VFRVPGLKW 384 (599)
Q Consensus 307 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~--~~~~~~l~~ 384 (599)
+++|+.|++++|.+++ +|..+ .++|+.|++++|++++.. ..+++|+.|++++|.++. +|.. +..+..+++
T Consensus 409 ~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~-ip~~~~l~~L~~L~L 480 (549)
T 2z81_A 409 PEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLKT-LPDASLFPVLLVMKI 480 (549)
T ss_dssp CTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSS-CCCGGGCTTCCEEEC
T ss_pred cccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccCc-CCCcccCccCCEEec
Confidence 8888888888888873 34333 257888888888887542 467788888888888873 4432 345577888
Q ss_pred ccCccceeCCCCCCCCCCCCcccccCCC
Q 007553 385 SENNLEVENPVISENAPPPQTQHFKGNK 412 (599)
Q Consensus 385 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (599)
++|++.+..|......+......+.+|+
T Consensus 481 s~N~l~~~~~~~~~~l~~L~~L~l~~N~ 508 (549)
T 2z81_A 481 SRNQLKSVPDGIFDRLTSLQKIWLHTNP 508 (549)
T ss_dssp CSSCCCCCCTTGGGGCTTCCEEECCSSC
T ss_pred CCCccCCcCHHHHhcCcccCEEEecCCC
Confidence 8888876555322333444455555555
No 19
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=351.21 Aligned_cols=372 Identities=23% Similarity=0.240 Sum_probs=258.3
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCccccc
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGS 83 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~ 83 (599)
.+.++++|..-. ++|++|++++ |.+.+..|..+..+++|++|+|++|.+++..|..|+++++|++|+|++|+++ .
T Consensus 9 ~n~l~~ip~~~~---~~L~~L~Ls~-n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 83 (520)
T 2z7x_B 9 KNGLIHVPKDLS---QKTTILNISQ-NYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-K 83 (520)
T ss_dssp TSCCSSCCCSCC---TTCSEEECCS-SCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-E
T ss_pred CCCccccccccc---ccccEEECCC-CcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-e
Confidence 355667775322 7888888888 7887777778888888888888888888777888888888888888888888 4
Q ss_pred CCccCCCCCCCcEEEeecCcCCcc-CCccccCCCcCCEEeeecccccccCCccccCCCcc--cEEecccCcc--CCCCcc
Q 007553 84 IPLEFGNLKDLYDLRLQGNKLDGL-IPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNL--VSLFLDNNNL--TGPIPS 158 (599)
Q Consensus 84 ~p~~~~~l~~L~~L~L~~n~~~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L--~~L~l~~n~i--~~~~~~ 158 (599)
+|.. .+++|++|++++|++.+. +|..|+++++|++|++++|.+.+ ..+..+++| ++|++++|.+ .+..|.
T Consensus 84 lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~ 158 (520)
T 2z7x_B 84 ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPE 158 (520)
T ss_dssp EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTT
T ss_pred cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccc
Confidence 5544 788888888888888763 67788888888888888888875 346666677 8888888877 555554
Q ss_pred cccC--------------------------CCCC----------------------------------------------
Q 007553 159 TLYH--------------------------LNQL---------------------------------------------- 166 (599)
Q Consensus 159 ~l~~--------------------------l~~L---------------------------------------------- 166 (599)
.+.. +++|
T Consensus 159 ~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~ 238 (520)
T 2z7x_B 159 GLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFI 238 (520)
T ss_dssp TTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHH
T ss_pred cccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHH
Confidence 4444 3333
Q ss_pred -----------CeeecccccccccCcccc-----CCCCCCCEEEccCCcccccCc-hhccCC---CCCCEEeCCCCcCcc
Q 007553 167 -----------STLYLAYNNLVGPLPKEV-----GNLKNLDSLLLNRNNLTGPIP-STIGFL---NLLDELRLSHNRLDG 226 (599)
Q Consensus 167 -----------~~L~l~~n~~~~~~~~~l-----~~l~~L~~L~l~~n~~~~~~~-~~~~~l---~~L~~L~l~~n~l~~ 226 (599)
++|++++|.+.+.+|..+ ..+++|+.++++.|.+ .+| ..+..+ ..|+.|++++|.+.+
T Consensus 239 ~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~ 316 (520)
T 2z7x_B 239 RILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVH 316 (520)
T ss_dssp HHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCC
T ss_pred HHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccc
Confidence 333333343333333333 3344444444444433 122 111111 335555555555442
Q ss_pred cCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceee--cCCcCccCCCCCCEEECCCCCCccCCCc-c
Q 007553 227 PIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIG--PIPPTIGYLTNLTSLNLGYNQLNSSIPP-E 303 (599)
Q Consensus 227 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~--~~~~~~~~~~~L~~L~ls~n~~~~~~~~-~ 303 (599)
.. .+..+++|++|++++|.+++..|..+..+++|+.|++++|.+.+ .+|..+..+++|++|++++|.+.+.+|. .
T Consensus 317 ~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~ 394 (520)
T 2z7x_B 317 ML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGD 394 (520)
T ss_dssp CC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCS
T ss_pred cc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccch
Confidence 21 12577888888888888887778888888888888888888876 4556677888888888888888874554 3
Q ss_pred CcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCccCC---CCC
Q 007553 304 LMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVF---RVP 380 (599)
Q Consensus 304 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~---~~~ 380 (599)
+..+++|+.|++++|.+++..|..+. ++|+.|++++|+++ .+|..+..+++|+.|++++|+++...+..+. .+.
T Consensus 395 ~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 471 (520)
T 2z7x_B 395 CSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQ 471 (520)
T ss_dssp CCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCccc
Confidence 67788888888888888776665553 67888888888888 6777666888888888888888854333233 347
Q ss_pred eeecccCcccee
Q 007553 381 GLKWSENNLEVE 392 (599)
Q Consensus 381 ~l~~~~n~~~~~ 392 (599)
.+++++|++.+.
T Consensus 472 ~L~l~~N~~~c~ 483 (520)
T 2z7x_B 472 KIWLHTNPWDCS 483 (520)
T ss_dssp EEECCSSCBCCC
T ss_pred EEECcCCCCccc
Confidence 777888887653
No 20
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.4e-40 Score=344.95 Aligned_cols=368 Identities=21% Similarity=0.224 Sum_probs=315.9
Q ss_pred cEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccC-CccCCCCCCCcEEEee
Q 007553 22 VTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSI-PLEFGNLKDLYDLRLQ 100 (599)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~-p~~~~~l~~L~~L~L~ 100 (599)
+.++..+ +.++ .+|. + .++|++|+|++|.+++..|..|+++++|++|++++|.+.+.+ +..|.++++|++|+|+
T Consensus 13 ~~~~c~~-~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 13 YNAICIN-RGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TEEECCS-SCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred cccCcCC-CCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 4556655 5554 5665 3 378999999999999888999999999999999999997444 6789999999999999
Q ss_pred cCcCCccCCccccCCCcCCEEeeecccccccCCcc--ccCCCcccEEecccCccCCCCccc-ccCCCCCCeeeccccccc
Q 007553 101 GNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQE--VGNLKNLVSLFLDNNNLTGPIPST-LYHLNQLSTLYLAYNNLV 177 (599)
Q Consensus 101 ~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~--l~~l~~L~~L~l~~n~i~~~~~~~-l~~l~~L~~L~l~~n~~~ 177 (599)
+|++.+..|..|+++++|++|++++|.+++..+.. +.++++|++|++++|.+++..|.. +..+++|++|++++|.+.
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 99999888999999999999999999998755444 899999999999999999887775 889999999999999999
Q ss_pred ccCccccCCC--CCCCEEEccCCcccccCchh--------ccCCCCCCEEeCCCCcCcccCcccCCC---CCCCCEEEcc
Q 007553 178 GPLPKEVGNL--KNLDSLLLNRNNLTGPIPST--------IGFLNLLDELRLSHNRLDGPIPPTIGN---LTYLTSLDLS 244 (599)
Q Consensus 178 ~~~~~~l~~l--~~L~~L~l~~n~~~~~~~~~--------~~~l~~L~~L~l~~n~l~~~~~~~~~~---l~~L~~L~l~ 244 (599)
+..+..+..+ .+|+.|++++|.+.+..+.. +..+++|+.|++++|.+.+..+..+.. .++|+.|+++
T Consensus 168 ~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~ 247 (455)
T 3v47_A 168 SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILS 247 (455)
T ss_dssp CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECT
T ss_pred ccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeec
Confidence 8888887766 78999999999988654433 335688999999999999877766544 3899999999
Q ss_pred CCcCCCCC----------CcccC--CCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCE
Q 007553 245 SNQLSGLL----------PREVG--NLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQN 312 (599)
Q Consensus 245 ~n~l~~~~----------~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~ 312 (599)
+|...+.. +..+. ..++|+.|++++|.+.+..+..+..+++|++|++++|.+.+..|..+..+++|+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 327 (455)
T 3v47_A 248 NSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLK 327 (455)
T ss_dssp TCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCE
Confidence 98665431 11222 2368999999999999999999999999999999999999988889999999999
Q ss_pred EEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCccC---CCCCeeecccCcc
Q 007553 313 LAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSV---FRVPGLKWSENNL 389 (599)
Q Consensus 313 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~---~~~~~l~~~~n~~ 389 (599)
|++++|.+++..|..+..+++|++|++++|++++..|..+..+++|+.|++++|.+++..+..+ ..++.+++++|++
T Consensus 328 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 407 (455)
T 3v47_A 328 LNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407 (455)
T ss_dssp EECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCc
Confidence 9999999998888899999999999999999998889999999999999999999998766544 3458899999999
Q ss_pred ceeCC
Q 007553 390 EVENP 394 (599)
Q Consensus 390 ~~~~~ 394 (599)
.+..|
T Consensus 408 ~~~~~ 412 (455)
T 3v47_A 408 DCSCP 412 (455)
T ss_dssp CCCTT
T ss_pred ccCCC
Confidence 87665
No 21
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.2e-39 Score=350.76 Aligned_cols=379 Identities=23% Similarity=0.242 Sum_probs=299.4
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCccccc
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGS 83 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~ 83 (599)
.+.+..++..+|.++++|++|++++ |.+.+..|..|+.+++|++|++++|.+++..|..|+++++|++|++++|.+++.
T Consensus 35 ~n~l~~~~~~~~~~l~~L~~L~Ls~-n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 113 (549)
T 2z81_A 35 FNKITYIGHGDLRACANLQVLILKS-SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTL 113 (549)
T ss_dssp SSCCCEECSSTTSSCTTCCEEECTT-SCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSS
T ss_pred CCccCccChhhhhcCCcccEEECCC-CCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCccccc
Confidence 4567888888899999999999999 999988889999999999999999999977777799999999999999999863
Q ss_pred -CCccCCCCCCCcEEEeecCcCCccC-CccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCccccc
Q 007553 84 -IPLEFGNLKDLYDLRLQGNKLDGLI-PSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLY 161 (599)
Q Consensus 84 -~p~~~~~l~~L~~L~L~~n~~~~~~-~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~ 161 (599)
.|..|.++++|++|++++|++.+.+ +..|.++++|++|++++|.+.+..|..+.++++|++|+++.|.+....+..+.
T Consensus 114 ~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~ 193 (549)
T 2z81_A 114 GVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFAD 193 (549)
T ss_dssp CSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHH
T ss_pred chhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHh
Confidence 5678999999999999999844444 46899999999999999999988888888777777777776665432211223
Q ss_pred CCCCCCeeecccccccccC--c----------------------------------------------------------
Q 007553 162 HLNQLSTLYLAYNNLVGPL--P---------------------------------------------------------- 181 (599)
Q Consensus 162 ~l~~L~~L~l~~n~~~~~~--~---------------------------------------------------------- 181 (599)
.+++|++|++++|.+.+.. +
T Consensus 194 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~ 273 (549)
T 2z81_A 194 ILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSE 273 (549)
T ss_dssp STTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCT
T ss_pred hcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccc
Confidence 4556666666665554320 0
Q ss_pred -cccC-----------------------------CCCCCCEEEccCCcccccCchhc-cCCCCCCEEeCCCCcCcccCc-
Q 007553 182 -KEVG-----------------------------NLKNLDSLLLNRNNLTGPIPSTI-GFLNLLDELRLSHNRLDGPIP- 229 (599)
Q Consensus 182 -~~l~-----------------------------~l~~L~~L~l~~n~~~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~- 229 (599)
..+. ..++|+.|++++|.+. .+|..+ ..+++|+.|++++|.+.+..+
T Consensus 274 ~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~ 352 (549)
T 2z81_A 274 SDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLK 352 (549)
T ss_dssp TTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHH
T ss_pred hhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCcccccccc
Confidence 0001 1235666677777665 456555 578999999999999987654
Q ss_pred --ccCCCCCCCCEEEccCCcCCCCCC--cccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCc
Q 007553 230 --PTIGNLTYLTSLDLSSNQLSGLLP--REVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELM 305 (599)
Q Consensus 230 --~~~~~l~~L~~L~l~~n~l~~~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~ 305 (599)
..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.++ .+|..+..+++|++|++++|.+.+ +|..+
T Consensus 353 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~- 429 (549)
T 2z81_A 353 NSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI- 429 (549)
T ss_dssp HHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS-
T ss_pred chhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh-
Confidence 347889999999999999986432 45888999999999999998 678888889999999999999874 44433
Q ss_pred CCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCccCC---CCCee
Q 007553 306 NCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVF---RVPGL 382 (599)
Q Consensus 306 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~---~~~~l 382 (599)
.++|+.|++++|.+++.+ ..+++|++|++++|+++ .+|. ...+++|+.|++++|.+++..|..+. .++.+
T Consensus 430 -~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 502 (549)
T 2z81_A 430 -PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKI 502 (549)
T ss_dssp -CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEE
T ss_pred -cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEE
Confidence 268999999999998643 57889999999999998 5665 45688999999999999988876544 45788
Q ss_pred ecccCccceeCC
Q 007553 383 KWSENNLEVENP 394 (599)
Q Consensus 383 ~~~~n~~~~~~~ 394 (599)
++++|++.+..|
T Consensus 503 ~l~~N~~~~~~~ 514 (549)
T 2z81_A 503 WLHTNPWDCSCP 514 (549)
T ss_dssp ECCSSCBCCCHH
T ss_pred EecCCCccCCCc
Confidence 899998876443
No 22
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=345.98 Aligned_cols=377 Identities=24% Similarity=0.236 Sum_probs=290.8
Q ss_pred cEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeec
Q 007553 22 VTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQG 101 (599)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 101 (599)
++|++++ +.++ .+|..+. ++|++|++++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 3 ~~l~ls~-n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSK-NGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTT-SCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCC-CCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 6899998 8888 6887775 8999999999999987778899999999999999999988899999999999999999
Q ss_pred CcCCccCCccccCCCcCCEEeeecccccc-cCCccccCCCcccEEecccCccCCCCcccccCCCCC--Ceeecccccc--
Q 007553 102 NKLDGLIPSSIGNLTNLTHLDLSLNQLSG-RLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQL--STLYLAYNNL-- 176 (599)
Q Consensus 102 n~~~~~~~~~~~~l~~L~~L~l~~n~i~~-~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L--~~L~l~~n~~-- 176 (599)
|++.. +|.. .+++|++|++++|.+++ .+|..++++++|++|++++|.+++ ..+..+++| ++|++++|.+
T Consensus 79 N~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Cceee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 99984 5554 89999999999999987 478899999999999999999986 356777788 9999999988
Q ss_pred cccCccccCC--------------------------CCCCCEEEccCCc------------------------------c
Q 007553 177 VGPLPKEVGN--------------------------LKNLDSLLLNRNN------------------------------L 200 (599)
Q Consensus 177 ~~~~~~~l~~--------------------------l~~L~~L~l~~n~------------------------------~ 200 (599)
.+..|..+.. +++|+.|++++|. +
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhcccccccc
Confidence 5555555544 3334444444432 2
Q ss_pred cccCchhc---cCCCCCCEEeCCCCcCcccCcccC-----CCCCCCCEEEccCC--------------------------
Q 007553 201 TGPIPSTI---GFLNLLDELRLSHNRLDGPIPPTI-----GNLTYLTSLDLSSN-------------------------- 246 (599)
Q Consensus 201 ~~~~~~~~---~~l~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~l~~n-------------------------- 246 (599)
.+..+..+ ...+.|+.|++++|.+.+.+|..+ ..+++|+.+++++|
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n 312 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGT 312 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESS
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCC
Confidence 21100000 012356667777777766666665 55555555555444
Q ss_pred cCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCcc--CCCccCcCCCCCCEEEcccCcCccCC
Q 007553 247 QLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNS--SIPPELMNCSQLQNLAVNHNSLSGSI 324 (599)
Q Consensus 247 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~--~~~~~~~~l~~L~~L~l~~n~l~~~~ 324 (599)
.+.+.. .+..+++|++|++++|.+.+.+|..+..+++|++|++++|.+.+ .+|..+..+++|+.|++++|.+++.+
T Consensus 313 ~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l 390 (520)
T 2z7x_B 313 RMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDE 390 (520)
T ss_dssp CCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCG
T ss_pred cccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccc
Confidence 443211 12678999999999999999889999999999999999999986 45667889999999999999999856
Q ss_pred Cc-cccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCccC---CCCCeeecccCccceeCCCCCCCC
Q 007553 325 PS-EIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSV---FRVPGLKWSENNLEVENPVISENA 400 (599)
Q Consensus 325 ~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~---~~~~~l~~~~n~~~~~~~~~~~~~ 400 (599)
|. .+..+++|++|++++|++++..|..+. ++|+.|++++|.++ .+|..+ ..++.+++++|.+....+......
T Consensus 391 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l 467 (520)
T 2z7x_B 391 KKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRL 467 (520)
T ss_dssp GGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccC
Confidence 65 478899999999999999988877664 78999999999998 566544 455889999999885333212333
Q ss_pred CCCCcccccCCCC
Q 007553 401 PPPQTQHFKGNKG 413 (599)
Q Consensus 401 ~~~~~~~~~~~~~ 413 (599)
+........+|+-
T Consensus 468 ~~L~~L~l~~N~~ 480 (520)
T 2z7x_B 468 TSLQKIWLHTNPW 480 (520)
T ss_dssp TTCCEEECCSSCB
T ss_pred CcccEEECcCCCC
Confidence 4444555666653
No 23
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.5e-38 Score=342.47 Aligned_cols=371 Identities=23% Similarity=0.215 Sum_probs=224.6
Q ss_pred CcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccC
Q 007553 5 GNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSI 84 (599)
Q Consensus 5 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~ 84 (599)
++++++|..- .++|++|++++ |.+.+..|..++.+++|++|+|++|.+++..|+.|.++++|++|+|++|.++ .+
T Consensus 41 ~~L~~ip~~~---~~~L~~L~Ls~-N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~l 115 (562)
T 3a79_B 41 RNLTHVPKDL---PPRTKALSLSQ-NSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NI 115 (562)
T ss_dssp SCCCSCCTTS---CTTCCEEECCS-SCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EE
T ss_pred CCCccCCCCC---CCCcCEEECCC-CCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-cc
Confidence 4555666532 26788888887 7777666677788888888888888888777777888888888888888877 45
Q ss_pred CccCCCCCCCcEEEeecCcCCcc-CCccccCCCcCCEEeeecccccccCCccccCCCcc--cEEecccCcc--CCCCccc
Q 007553 85 PLEFGNLKDLYDLRLQGNKLDGL-IPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNL--VSLFLDNNNL--TGPIPST 159 (599)
Q Consensus 85 p~~~~~l~~L~~L~L~~n~~~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L--~~L~l~~n~i--~~~~~~~ 159 (599)
|.. .+++|++|++++|++.+. .|..|+++++|++|++++|.+.... +..+++| ++|++++|.+ ++..|..
T Consensus 116 p~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~---~~~l~~L~L~~L~L~~n~l~~~~~~~~~ 190 (562)
T 3a79_B 116 SCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLD---LLPVAHLHLSCILLDLVSYHIKGGETES 190 (562)
T ss_dssp CSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTT---TGGGTTSCEEEEEEEESSCCCCSSSCCE
T ss_pred Ccc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCc---hhhhhhceeeEEEeecccccccccCccc
Confidence 544 678888888888887753 3567888888888888888776532 3444444 8888888777 5555544
Q ss_pred ccCCC--------------------------CCCeeeccccc----------------------------cccc----Cc
Q 007553 160 LYHLN--------------------------QLSTLYLAYNN----------------------------LVGP----LP 181 (599)
Q Consensus 160 l~~l~--------------------------~L~~L~l~~n~----------------------------~~~~----~~ 181 (599)
+..+. +|+.|++++|. +.+. ++
T Consensus 191 l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~ 270 (562)
T 3a79_B 191 LQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLF 270 (562)
T ss_dssp EEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHH
T ss_pred ccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHH
Confidence 44322 33333333321 0000 00
Q ss_pred cccCCCCCCCEEEccCCcccccCchhc-----cCC--------------------------CCCCEEeCCCCcCcccCcc
Q 007553 182 KEVGNLKNLDSLLLNRNNLTGPIPSTI-----GFL--------------------------NLLDELRLSHNRLDGPIPP 230 (599)
Q Consensus 182 ~~l~~l~~L~~L~l~~n~~~~~~~~~~-----~~l--------------------------~~L~~L~l~~n~l~~~~~~ 230 (599)
..+ ..++|++|++++|.+.+.+|..+ ..+ ..|+.|++++|.+....
T Consensus 271 ~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~-- 347 (562)
T 3a79_B 271 QFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV-- 347 (562)
T ss_dssp HHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--
T ss_pred Hhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--
Confidence 000 11245555555555554444333 111 23555555555543221
Q ss_pred cCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceee--cCCcCccCCCCCCEEECCCCCCccCCCc-cCcCC
Q 007553 231 TIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIG--PIPPTIGYLTNLTSLNLGYNQLNSSIPP-ELMNC 307 (599)
Q Consensus 231 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~--~~~~~~~~~~~L~~L~ls~n~~~~~~~~-~~~~l 307 (599)
....+++|++|++++|.+++..|..+..+++|+.|++++|.+.+ .+|..+..+++|++|++++|.+.+.+|. .+..+
T Consensus 348 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l 427 (562)
T 3a79_B 348 CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWA 427 (562)
T ss_dssp CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCC
T ss_pred CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCc
Confidence 11456667777777777766666666667777777777776664 2234566667777777777777653443 35666
Q ss_pred CCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCccCC---CCCeeec
Q 007553 308 SQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVF---RVPGLKW 384 (599)
Q Consensus 308 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~---~~~~l~~ 384 (599)
++|+.|++++|.+++..|..+. ++|+.|++++|+++ .+|..+..+++|+.|++++|.++...+..+. .+..+++
T Consensus 428 ~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l 504 (562)
T 3a79_B 428 ESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWL 504 (562)
T ss_dssp TTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEEC
T ss_pred ccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEe
Confidence 6777777777776655444332 56777777777766 4555555666777777777776643322122 3355666
Q ss_pred ccCccce
Q 007553 385 SENNLEV 391 (599)
Q Consensus 385 ~~n~~~~ 391 (599)
++|++.+
T Consensus 505 ~~N~~~c 511 (562)
T 3a79_B 505 HDNPWDC 511 (562)
T ss_dssp CSCCBCC
T ss_pred cCCCcCC
Confidence 6666654
No 24
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.1e-38 Score=336.82 Aligned_cols=383 Identities=22% Similarity=0.208 Sum_probs=296.3
Q ss_pred ccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCC
Q 007553 15 FTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDL 94 (599)
Q Consensus 15 l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 94 (599)
...+...+++++++ +.+++ +|..+. ++|++|++++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|
T Consensus 27 ~~~~~~~~~l~ls~-~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 102 (562)
T 3a79_B 27 PFSNELESMVDYSN-RNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDL 102 (562)
T ss_dssp ------CCEEECTT-SCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTC
T ss_pred ccccCCCcEEEcCC-CCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCC
Confidence 34455668999998 88884 787664 899999999999998777899999999999999999999889999999999
Q ss_pred cEEEeecCcCCccCCccccCCCcCCEEeeeccccccc-CCccccCCCcccEEecccCccCCCCcccccCCCCC--Ceeec
Q 007553 95 YDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGR-LPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQL--STLYL 171 (599)
Q Consensus 95 ~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L--~~L~l 171 (599)
++|+|++|++.. +|.. .+++|++|++++|.+.+. .|..++++++|++|++++|.+++. .+..+++| ++|++
T Consensus 103 ~~L~Ls~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L 176 (562)
T 3a79_B 103 EYLDVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILL 176 (562)
T ss_dssp CEEECTTSCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEE
T ss_pred CEEECCCCcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEe
Confidence 999999999984 5555 899999999999999874 468899999999999999999864 44555555 99999
Q ss_pred ccccc--cccCccccCC--------------------------CCCCCEEEccCCc------------------------
Q 007553 172 AYNNL--VGPLPKEVGN--------------------------LKNLDSLLLNRNN------------------------ 199 (599)
Q Consensus 172 ~~n~~--~~~~~~~l~~--------------------------l~~L~~L~l~~n~------------------------ 199 (599)
++|.+ .+..|..+.. +++|+.|++++|.
T Consensus 177 ~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L 256 (562)
T 3a79_B 177 DLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTL 256 (562)
T ss_dssp EESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEE
T ss_pred ecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEe
Confidence 99988 6655555543 3456666666653
Q ss_pred ----cccc----CchhccCCCCCCEEeCCCCcCcccCcccC-----CCCC--------------------------CCCE
Q 007553 200 ----LTGP----IPSTIGFLNLLDELRLSHNRLDGPIPPTI-----GNLT--------------------------YLTS 240 (599)
Q Consensus 200 ----~~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-----~~l~--------------------------~L~~ 240 (599)
+.+. .+.. ....+|+.|++++|.+.+.+|..+ ..++ +|++
T Consensus 257 ~~~~l~~~~~~~~~~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~ 335 (562)
T 3a79_B 257 QHIETTWKCSVKLFQF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKM 335 (562)
T ss_dssp EEEEECHHHHHHHHHH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSE
T ss_pred cCCcCcHHHHHHHHHh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceE
Confidence 1100 0111 122489999999999998888765 3333 3666
Q ss_pred EEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccC--CCccCcCCCCCCEEEcccC
Q 007553 241 LDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSS--IPPELMNCSQLQNLAVNHN 318 (599)
Q Consensus 241 L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~--~~~~~~~l~~L~~L~l~~n 318 (599)
|++++|.+.... ....+++|++|++++|.+.+..|..+..+++|++|++++|.+++. +|..+..+++|+.|++++|
T Consensus 336 L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N 413 (562)
T 3a79_B 336 LSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLN 413 (562)
T ss_dssp EEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTS
T ss_pred EEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCC
Confidence 777777665321 126789999999999999998899999999999999999999863 3466889999999999999
Q ss_pred cCccCCCc-cccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCccCC---CCCeeecccCccceeCC
Q 007553 319 SLSGSIPS-EIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVF---RVPGLKWSENNLEVENP 394 (599)
Q Consensus 319 ~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~---~~~~l~~~~n~~~~~~~ 394 (599)
.+++.+|. .+..+++|+.|++++|++++..|..+. ++|+.|++++|.++ .+|..++ .+..+++++|.+...++
T Consensus 414 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~ 490 (562)
T 3a79_B 414 SLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPD 490 (562)
T ss_dssp CCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCT
T ss_pred cCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCH
Confidence 99985554 578899999999999999987776654 78999999999998 4555443 45889999999985433
Q ss_pred CCCCCCCCCCcccccCCCC
Q 007553 395 VISENAPPPQTQHFKGNKG 413 (599)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~ 413 (599)
......+........+|+-
T Consensus 491 ~~~~~l~~L~~L~l~~N~~ 509 (562)
T 3a79_B 491 GVFDRLTSLQYIWLHDNPW 509 (562)
T ss_dssp TSTTTCTTCCCEECCSCCB
T ss_pred HHHhcCCCCCEEEecCCCc
Confidence 2123334444555666653
No 25
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=331.70 Aligned_cols=322 Identities=26% Similarity=0.239 Sum_probs=242.4
Q ss_pred cEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeec
Q 007553 22 VTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQG 101 (599)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 101 (599)
+.++..+ +.++ .+|..+ .+++++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~-~~l~-~ip~~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 14 RAVLCHR-KRFV-AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TEEECCS-CCCS-SCCSCC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCC-CCcC-cCCCCC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 4566665 5554 456544 25778888888888877777788888888888888888877777888888888888888
Q ss_pred CcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCc
Q 007553 102 NKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLP 181 (599)
Q Consensus 102 n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~ 181 (599)
|++....+..|.++++|++|++++|.+....+..+.++++|++|++++|.+++..+..|..+++|++|++++|.+.+..+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 88876655667788888888888888887777778888888888888888877777777788888888888888777666
Q ss_pred cccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCC
Q 007553 182 KEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKY 261 (599)
Q Consensus 182 ~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 261 (599)
..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|...+.++.......+|++|++++|.+++..+..+..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 66777888888888888777766667777778888888877776666666556667788888888777544456777777
Q ss_pred CCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCC
Q 007553 262 LDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSH 341 (599)
Q Consensus 262 L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 341 (599)
|+.|+|++|.+.+..+..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 77777777777766666677777777777777777777777777777777777777777766666667777777777777
Q ss_pred cccccc
Q 007553 342 NFINGT 347 (599)
Q Consensus 342 n~l~~~ 347 (599)
|.+...
T Consensus 330 N~l~c~ 335 (477)
T 2id5_A 330 NPLACD 335 (477)
T ss_dssp SCEECS
T ss_pred CCccCc
Confidence 777643
No 26
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=331.51 Aligned_cols=326 Identities=24% Similarity=0.221 Sum_probs=299.8
Q ss_pred CCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeec
Q 007553 46 LKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSL 125 (599)
Q Consensus 46 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~ 125 (599)
-+.++++++.++ .+|..+ .+++++|+|++|.+++..|..|.++++|++|+|++|.+.+..|..|.++++|++|++++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCS-SCCSCC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 368999999998 677655 36899999999999988889999999999999999999988899999999999999999
Q ss_pred ccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCc
Q 007553 126 NQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIP 205 (599)
Q Consensus 126 n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~ 205 (599)
|.+....+..|.++++|++|++++|.+.+..+..|..+++|++|++++|.+.+..+..|..+++|++|++++|.+++..+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 99997777789999999999999999998888899999999999999999998888899999999999999999998777
Q ss_pred hhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCC
Q 007553 206 STIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTN 285 (599)
Q Consensus 206 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 285 (599)
..+..+++|+.|++++|.+.+..+..|..+++|++|++++|...+.+|.......+|+.|++++|.+.+..+..+..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 78999999999999999999888889999999999999999888777777767779999999999998554457888999
Q ss_pred CCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCC
Q 007553 286 LTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSK 365 (599)
Q Consensus 286 L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~ 365 (599)
|+.|++++|.+.+..+..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 99999999999988888899999999999999999998899999999999999999999987778889999999999999
Q ss_pred CcCcccCCc
Q 007553 366 NNLSGVIPK 374 (599)
Q Consensus 366 n~l~~~~~~ 374 (599)
|++.+.++.
T Consensus 330 N~l~c~c~~ 338 (477)
T 2id5_A 330 NPLACDCRL 338 (477)
T ss_dssp SCEECSGGG
T ss_pred CCccCccch
Confidence 999987654
No 27
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=7.6e-37 Score=321.33 Aligned_cols=347 Identities=30% Similarity=0.437 Sum_probs=261.7
Q ss_pred cCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCc
Q 007553 16 TCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLY 95 (599)
Q Consensus 16 ~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 95 (599)
..++++++|++.+ +.+. .+| .+..+++|++|++++|.+++..+ +..+++|++|++++|.+++..+ |.++++|+
T Consensus 43 ~~l~~l~~L~l~~-~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 115 (466)
T 1o6v_A 43 TDLDQVTTLQADR-LGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLT 115 (466)
T ss_dssp HHHHTCCEEECCS-SCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCC
T ss_pred hHhccccEEecCC-CCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCC
Confidence 3467788888887 6665 344 37778888888888888875433 7888888888888888885544 88888888
Q ss_pred EEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccccc
Q 007553 96 DLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNN 175 (599)
Q Consensus 96 ~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~ 175 (599)
+|++++|.+.+..+ +.++++|++|++++|.+.+. + .+.++++|++|+++ |.+.+. + .+..+++|++|++++|.
T Consensus 116 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~ 188 (466)
T 1o6v_A 116 GLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDL-K-PLANLTTLERLDISSNK 188 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCc-h-hhccCCCCCEEECcCCc
Confidence 88888888876532 78888888888888888753 3 47888888888886 344433 2 37788888888888888
Q ss_pred ccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcc
Q 007553 176 LVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPRE 255 (599)
Q Consensus 176 ~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 255 (599)
+.+. ..+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+. ..+..+++|++|++++|.+.+..+
T Consensus 189 l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-- 260 (466)
T 1o6v_A 189 VSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP-- 260 (466)
T ss_dssp CCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred CCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--
Confidence 7754 347778888888888888876544 66778888888888888753 357778888888888888876443
Q ss_pred cCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCC
Q 007553 256 VGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLR 335 (599)
Q Consensus 256 l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 335 (599)
+..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..| +..+++|+
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 334 (466)
T 1o6v_A 261 LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 334 (466)
T ss_dssp GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCC
T ss_pred hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCC
Confidence 7788888888888888875433 6778888888888888876433 6778888888888888886654 66788888
Q ss_pred EEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCC-ccCCCCCeeecccCcccee
Q 007553 336 QLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIP-KSVFRVPGLKWSENNLEVE 392 (599)
Q Consensus 336 ~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~-~~~~~~~~l~~~~n~~~~~ 392 (599)
.|++++|++++. ..+..+++|+.|++++|++++..| ..+..+..+++++|.+.+.
T Consensus 335 ~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 335 RLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp EEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEECC
T ss_pred EeECCCCccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccCC
Confidence 888888888754 457778888888888888887766 2233446777788777663
No 28
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.5e-36 Score=330.92 Aligned_cols=151 Identities=24% Similarity=0.197 Sum_probs=119.0
Q ss_pred cccccccccccCC-CCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccC
Q 007553 6 NAAELSQLNFTCF-PNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSI 84 (599)
Q Consensus 6 ~~~~~~~~~l~~l-~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~ 84 (599)
+.++||. .+ +++++|++++ |.+++..+..|.++++|++|+|++|.|++..|++|.++++|++|+|++|++++..
T Consensus 42 ~l~~vP~----~lp~~~~~LdLs~-N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~ 116 (635)
T 4g8a_A 42 NFYKIPD----NLPFSTKNLDLSF-NPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 116 (635)
T ss_dssp CCSSCCS----SSCTTCCEEECTT-SCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred CcCccCC----CCCcCCCEEEeeC-CCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCC
Confidence 4455554 23 3688888888 8888766778888888888888888888777778888888888888888888766
Q ss_pred CccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeeccccccc-CCccccCCCcccEEecccCccCCCCccccc
Q 007553 85 PLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGR-LPQEVGNLKNLVSLFLDNNNLTGPIPSTLY 161 (599)
Q Consensus 85 p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~ 161 (599)
+..|.++++|++|+|++|++++..+..|+++++|++|++++|.+... .|..+..+++|++|++++|++++..+..|.
T Consensus 117 ~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 194 (635)
T 4g8a_A 117 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 194 (635)
T ss_dssp GGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred HHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccccc
Confidence 67788888888888888888877667788888888888888888754 567778888888888888887765554443
No 29
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.5e-36 Score=315.44 Aligned_cols=335 Identities=28% Similarity=0.428 Sum_probs=290.2
Q ss_pred CcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccC
Q 007553 5 GNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSI 84 (599)
Q Consensus 5 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~ 84 (599)
+.+.+++. +..+++|++|++++ +.+.+..| +..+++|++|++++|.+++..+ ++.+++|++|++++|.+++..
T Consensus 56 ~~i~~l~~--~~~l~~L~~L~Ls~-n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 128 (466)
T 1o6v_A 56 LGIKSIDG--VEYLNNLTQINFSN-NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDID 128 (466)
T ss_dssp SCCCCCTT--GGGCTTCCEEECCS-SCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG
T ss_pred CCCccCcc--hhhhcCCCEEECCC-CccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCCh
Confidence 45566664 88899999999998 88875543 9999999999999999986544 899999999999999998654
Q ss_pred CccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCC
Q 007553 85 PLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLN 164 (599)
Q Consensus 85 p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 164 (599)
+ +.++++|++|++++|.+.+. + .+..+++|++|+++ +.+.+.. .+.++++|++|++++|.+.+. ..+..++
T Consensus 129 ~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~ 199 (466)
T 1o6v_A 129 P--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLT 199 (466)
T ss_dssp G--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCT
T ss_pred H--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCC
Confidence 3 89999999999999999864 3 58999999999997 4555332 389999999999999998864 3588899
Q ss_pred CCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEcc
Q 007553 165 QLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLS 244 (599)
Q Consensus 165 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 244 (599)
+|++|++++|.+.+..+ ++.+++|++|++++|.+.+. ..+..+++|+.|++++|.+.+..+ +..+++|++|+++
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~ 273 (466)
T 1o6v_A 200 NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 273 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred CCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECC
Confidence 99999999999987654 77899999999999998853 467889999999999999986654 8899999999999
Q ss_pred CCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCC
Q 007553 245 SNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSI 324 (599)
Q Consensus 245 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 324 (599)
+|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+..| +..+++|+.|++++|.+++.
T Consensus 274 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~- 346 (466)
T 1o6v_A 274 ANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV- 346 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-
T ss_pred CCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-
Confidence 999986543 8899999999999999986543 7889999999999999987655 77899999999999999865
Q ss_pred CccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCccc
Q 007553 325 PSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGV 371 (599)
Q Consensus 325 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~ 371 (599)
..+..+++|+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 347 -~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 347 -SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp -GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred -hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 468899999999999999998777 88999999999999999874
No 30
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.9e-36 Score=313.32 Aligned_cols=344 Identities=21% Similarity=0.204 Sum_probs=270.0
Q ss_pred cccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCC
Q 007553 10 LSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFG 89 (599)
Q Consensus 10 ~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~ 89 (599)
.....++++++|++|++++ +.+++ +| .++.+++|++|++++|.+++ +| ++.+++|++|++++|.+++. + |+
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~-n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~ 103 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHN-SSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VT 103 (457)
T ss_dssp TSEEEHHHHTTCCEEECCS-SCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CT
T ss_pred ccccChhHcCCCCEEEccC-CCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cC
Confidence 3344678899999999998 88886 45 68999999999999999986 44 88999999999999999864 4 88
Q ss_pred CCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCee
Q 007553 90 NLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTL 169 (599)
Q Consensus 90 ~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 169 (599)
++++|++|++++|++.+. | ++.+++|++|++++|.+++. + ++++++|++|++++|...+.+ .+..+++|++|
T Consensus 104 ~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L 175 (457)
T 3bz5_A 104 PLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTL 175 (457)
T ss_dssp TCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEE
Confidence 999999999999999864 4 88999999999999999874 3 889999999999999655555 47889999999
Q ss_pred ecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCC
Q 007553 170 YLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLS 249 (599)
Q Consensus 170 ~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 249 (599)
++++|.+.+. | +..+++|+.|++++|.+++. .+..++.|+.|++++|++++ +| +..+++|+.|++++|.++
T Consensus 176 ~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~ 246 (457)
T 3bz5_A 176 DCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLT 246 (457)
T ss_dssp ECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCS
T ss_pred ECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCC
Confidence 9999999874 3 88899999999999999865 47888999999999999997 45 889999999999999999
Q ss_pred CCCCcccCCCC-------CCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCc--------cCcCCCCCCEEE
Q 007553 250 GLLPREVGNLK-------YLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPP--------ELMNCSQLQNLA 314 (599)
Q Consensus 250 ~~~~~~l~~l~-------~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~--------~~~~l~~L~~L~ 314 (599)
+..+..+..+. +|+.|++++|.+.+.+| +..+++|+.|++++|...+.+|. .+..+++|+.|+
T Consensus 247 ~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~ 324 (457)
T 3bz5_A 247 ELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLY 324 (457)
T ss_dssp CCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred CcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEE
Confidence 86544444433 44555666666555554 35678888888888876655443 245566777777
Q ss_pred cccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCccCCCCCeeecccCccceeCC
Q 007553 315 VNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVFRVPGLKWSENNLEVENP 394 (599)
Q Consensus 315 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~~~~l~~~~n~~~~~~~ 394 (599)
+++|.+++. + +..+++|+.|++++|++++ ++.|..|++++|.++|. ..+..++.++++.|+++|..|
T Consensus 325 L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~--~~~~~l~~l~l~~N~l~g~ip 391 (457)
T 3bz5_A 325 LNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE--GQTITMPKETLTNNSLTIAVS 391 (457)
T ss_dssp CTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE--EEEEECCCBCCBTTBEEEECC
T ss_pred CCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec--ceeeecCccccccCcEEEEcC
Confidence 777777763 2 6777777777777777774 23455556677777665 233345667788888888777
No 31
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.6e-35 Score=321.72 Aligned_cols=150 Identities=25% Similarity=0.281 Sum_probs=108.9
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCccccc
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGS 83 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~ 83 (599)
.|.+++++..+|.++++|++|++++ |.+++..|..|+++++|++|+|++|++++..+..|.++++|++|+|++|++++.
T Consensus 61 ~N~i~~l~~~~f~~l~~L~~L~Ls~-N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l 139 (635)
T 4g8a_A 61 FNPLRHLGSYSFFSFPELQVLDLSR-CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASL 139 (635)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTT-CCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCS
T ss_pred CCCCCCCCHHHHhCCCCCCEEECCC-CcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCC
Confidence 4567777777788888888888877 777766666777778888888888877765566677778888888888877766
Q ss_pred CCccCCCCCCCcEEEeecCcCCcc-CCccccCCCcCCEEeeecccccccCCccccCCCccc----EEecccCccCC
Q 007553 84 IPLEFGNLKDLYDLRLQGNKLDGL-IPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLV----SLFLDNNNLTG 154 (599)
Q Consensus 84 ~p~~~~~l~~L~~L~L~~n~~~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~----~L~l~~n~i~~ 154 (599)
.+..|+++++|++|++++|++.+. .|..++.+++|++|++++|.+++..+..+..+.+++ .++++.|.+..
T Consensus 140 ~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~ 215 (635)
T 4g8a_A 140 ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF 215 (635)
T ss_dssp TTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCE
T ss_pred ChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccc
Confidence 666677788888888888777653 466677777888888888877776666666555443 56666666553
No 32
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=5.8e-36 Score=307.42 Aligned_cols=317 Identities=22% Similarity=0.188 Sum_probs=267.4
Q ss_pred CCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEE
Q 007553 42 ALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHL 121 (599)
Q Consensus 42 ~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L 121 (599)
.++++++|++++|.++...+..|..+++|++|++++|.+++..+..|.++++|++|++++|++.+..|..|+++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46888999999999885544557888999999999999988777789999999999999999988778888999999999
Q ss_pred eeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCccc
Q 007553 122 DLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLT 201 (599)
Q Consensus 122 ~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~ 201 (599)
++++|.+....+..+.++++|++|++++|.+++..+..|..+++|++|++++|.+.+. .+..+++|+.|++++|.+.
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 9999999866556678899999999999999887777888999999999999988764 3566789999999999876
Q ss_pred ccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCcc
Q 007553 202 GPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIG 281 (599)
Q Consensus 202 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~ 281 (599)
+ +.....|+.|++++|.+... +. ...++|+.|++++|.+++. ..+..+++|++|++++|.+.+..|..+.
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp E-----EECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----cCCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 4 34456899999999998854 32 3357899999999999863 5788999999999999999988888999
Q ss_pred CCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEE
Q 007553 282 YLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEV 361 (599)
Q Consensus 282 ~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 361 (599)
.+++|++|++++|++++ +|..+..+++|+.|++++|.+. .+|..+..+++|+.|++++|.++.. + +..+++|+.|
T Consensus 270 ~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L 344 (390)
T 3o6n_A 270 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNL 344 (390)
T ss_dssp TCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEE
T ss_pred ccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEE
Confidence 99999999999999985 4666678899999999999998 5677788899999999999999854 3 6778899999
Q ss_pred ECCCCcCcccCCccC
Q 007553 362 DVSKNNLSGVIPKSV 376 (599)
Q Consensus 362 ~ls~n~l~~~~~~~~ 376 (599)
++++|++++.....+
T Consensus 345 ~l~~N~~~~~~~~~~ 359 (390)
T 3o6n_A 345 TLSHNDWDCNSLRAL 359 (390)
T ss_dssp ECCSSCEEHHHHHHH
T ss_pred EcCCCCccchhHHHH
Confidence 999999988755443
No 33
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-35 Score=320.39 Aligned_cols=317 Identities=22% Similarity=0.183 Sum_probs=271.5
Q ss_pred CCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEE
Q 007553 42 ALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHL 121 (599)
Q Consensus 42 ~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L 121 (599)
.+++++.|++++|.++...+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.+.+..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46788999999999886656667889999999999999998888889999999999999999998888888999999999
Q ss_pred eeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCccc
Q 007553 122 DLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLT 201 (599)
Q Consensus 122 ~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~ 201 (599)
++++|.++...+..|.++++|++|++++|.+++..|..|..+++|++|++++|.+.+.. +..+++|+.|++++|.+.
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999766666789999999999999999888888999999999999999888652 566789999999999876
Q ss_pred ccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCcc
Q 007553 202 GPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIG 281 (599)
Q Consensus 202 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~ 281 (599)
+ +.....|+.|++++|.+....+ . ..++|+.|++++|.+++ +..+..+++|+.|+|++|.+.+..|..+.
T Consensus 206 ~-----l~~~~~L~~L~ls~n~l~~~~~-~--~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 206 T-----LAIPIAVEELDASHNSINVVRG-P--VNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp E-----EECCTTCSEEECCSSCCCEEEC-S--CCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----ccCCchhheeeccCCccccccc-c--cCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 4 3455689999999999874433 2 23689999999999986 46788999999999999999998899999
Q ss_pred CCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEE
Q 007553 282 YLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEV 361 (599)
Q Consensus 282 ~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 361 (599)
.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|.+++. + +..+++|+.|
T Consensus 276 ~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L 350 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNL 350 (597)
T ss_dssp TCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEE
T ss_pred CccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEE
Confidence 99999999999999986 5666778999999999999998 5777888899999999999999854 3 6677899999
Q ss_pred ECCCCcCcccCCccC
Q 007553 362 DVSKNNLSGVIPKSV 376 (599)
Q Consensus 362 ~ls~n~l~~~~~~~~ 376 (599)
++++|+++|.+...+
T Consensus 351 ~l~~N~~~~~~~~~~ 365 (597)
T 3oja_B 351 TLSHNDWDCNSLRAL 365 (597)
T ss_dssp ECCSSCEEHHHHHHH
T ss_pred EeeCCCCCChhHHHH
Confidence 999999988755443
No 34
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.2e-34 Score=292.75 Aligned_cols=306 Identities=30% Similarity=0.408 Sum_probs=206.5
Q ss_pred CCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCE
Q 007553 41 GALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTH 120 (599)
Q Consensus 41 ~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~ 120 (599)
..+++|++|+++++.++ .++. +..+++|++|++++|.+++..+ |.++++|++|++++|.+.+. ..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCE
Confidence 35566666777666665 3332 5666667777777776664322 66667777777777766642 34666677777
Q ss_pred EeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcc
Q 007553 121 LDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNL 200 (599)
Q Consensus 121 L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~ 200 (599)
|++++|.+.+..+ +..+++|++|++++|......+ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 7777776664322 6666777777777765444333 36667777777777776664322 66677777777777776
Q ss_pred cccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCc
Q 007553 201 TGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTI 280 (599)
Q Consensus 201 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 280 (599)
.+..+ +..++.|+.|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+.+. ..+
T Consensus 190 ~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~ 261 (347)
T 4fmz_A 190 EDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAV 261 (347)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGG
T ss_pred ccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhH
Confidence 64322 6667777777777777764433 6677777777777777775332 67777788888887777643 356
Q ss_pred cCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCE
Q 007553 281 GYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSE 360 (599)
Q Consensus 281 ~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 360 (599)
..+++|++|++++|.+.+. ..+..+++|+.|++++|.+++..+..+..+++|+.|++++|++++..| +..+++|+.
T Consensus 262 ~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 337 (347)
T 4fmz_A 262 KDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDS 337 (347)
T ss_dssp TTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSE
T ss_pred hcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccce
Confidence 7778888888888877754 456777888888888888887777778888888888888888886655 667788888
Q ss_pred EECCCCcCc
Q 007553 361 VDVSKNNLS 369 (599)
Q Consensus 361 L~ls~n~l~ 369 (599)
|++++|+++
T Consensus 338 L~l~~N~i~ 346 (347)
T 4fmz_A 338 ADFANQVIK 346 (347)
T ss_dssp ESSSCC---
T ss_pred eehhhhccc
Confidence 888888765
No 35
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.3e-34 Score=292.60 Aligned_cols=309 Identities=24% Similarity=0.379 Sum_probs=267.2
Q ss_pred ccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCC
Q 007553 13 LNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLK 92 (599)
Q Consensus 13 ~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~ 92 (599)
.++..+++|++|++.+ +.+. .++ .+..+++|++|++++|.+++. +. +..+++|++|++++|.++. + ..|.+++
T Consensus 38 ~~~~~l~~L~~L~l~~-~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~ 110 (347)
T 4fmz_A 38 VTQEELESITKLVVAG-EKVA-SIQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLT 110 (347)
T ss_dssp ECHHHHTTCSEEECCS-SCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCT
T ss_pred ccchhcccccEEEEeC-Cccc-cch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCC
Confidence 3467899999999998 7776 344 488899999999999999854 44 8999999999999999985 3 4699999
Q ss_pred CCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecc
Q 007553 93 DLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLA 172 (599)
Q Consensus 93 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~ 172 (599)
+|++|++++|.+.+.. . +..+++|++|++++|......+ .+..+++|++|++++|.+.+..+ +..+++|++|+++
T Consensus 111 ~L~~L~l~~n~i~~~~-~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~ 185 (347)
T 4fmz_A 111 NLRELYLNEDNISDIS-P-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLN 185 (347)
T ss_dssp TCSEEECTTSCCCCCG-G-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECT
T ss_pred cCCEEECcCCcccCch-h-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEcc
Confidence 9999999999998653 3 8999999999999997664444 48999999999999999886543 8899999999999
Q ss_pred cccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCC
Q 007553 173 YNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLL 252 (599)
Q Consensus 173 ~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 252 (599)
+|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++.
T Consensus 186 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~- 258 (347)
T 4fmz_A 186 YNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI- 258 (347)
T ss_dssp TSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-
T ss_pred CCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-
Confidence 999886533 8889999999999999986544 7889999999999999986543 88999999999999999863
Q ss_pred CcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCC
Q 007553 253 PREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLI 332 (599)
Q Consensus 253 ~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 332 (599)
..+..+++|+.|++++|.+.+. ..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+++..| +..++
T Consensus 259 -~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~ 333 (347)
T 4fmz_A 259 -NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLS 333 (347)
T ss_dssp -GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCT
T ss_pred -hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhh
Confidence 5688999999999999999864 458889999999999999998888889999999999999999997655 78899
Q ss_pred CCCEEeCCCcccc
Q 007553 333 HLRQLDLSHNFIN 345 (599)
Q Consensus 333 ~L~~L~l~~n~l~ 345 (599)
+|+.|++++|.++
T Consensus 334 ~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 334 KMDSADFANQVIK 346 (347)
T ss_dssp TCSEESSSCC---
T ss_pred ccceeehhhhccc
Confidence 9999999999986
No 36
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7e-35 Score=299.32 Aligned_cols=312 Identities=22% Similarity=0.222 Sum_probs=273.2
Q ss_pred CCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcE
Q 007553 17 CFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYD 96 (599)
Q Consensus 17 ~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 96 (599)
.++++++|++.+ +.+....+..+..+++|++|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++
T Consensus 43 ~l~~l~~l~l~~-~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKN-STMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEES-CEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecC-CchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 468999999998 7766444444688999999999999999888889999999999999999999888888999999999
Q ss_pred EEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccc
Q 007553 97 LRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNL 176 (599)
Q Consensus 97 L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~ 176 (599)
|++++|++....+..|.++++|++|++++|.+.+..+..+.++++|++|++++|.+++. .+..+++|++|++++|.+
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccc
Confidence 99999999966556679999999999999999988888899999999999999999865 356789999999999987
Q ss_pred cccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCccc
Q 007553 177 VGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREV 256 (599)
Q Consensus 177 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 256 (599)
.+ +...++|++|++++|.+... +. ...++|+.|++++|.+++. ..+..+++|++|++++|.+.+..|..+
T Consensus 199 ~~-----~~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~ 268 (390)
T 3o6n_A 199 ST-----LAIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPF 268 (390)
T ss_dssp SE-----EECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGG
T ss_pred cc-----cCCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHc
Confidence 64 34457899999999998754 33 2357899999999999865 578999999999999999998889999
Q ss_pred CCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCE
Q 007553 257 GNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQ 336 (599)
Q Consensus 257 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 336 (599)
..+++|+.|+|++|.+.+ ++..+..+++|++|++++|++. .+|..+..+++|+.|++++|.++.. + +..+++|+.
T Consensus 269 ~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~ 343 (390)
T 3o6n_A 269 VKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKN 343 (390)
T ss_dssp TTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSE
T ss_pred cccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCE
Confidence 999999999999999986 4556678999999999999998 5677778899999999999999854 3 677899999
Q ss_pred EeCCCcccccc
Q 007553 337 LDLSHNFINGT 347 (599)
Q Consensus 337 L~l~~n~l~~~ 347 (599)
|++++|++...
T Consensus 344 L~l~~N~~~~~ 354 (390)
T 3o6n_A 344 LTLSHNDWDCN 354 (390)
T ss_dssp EECCSSCEEHH
T ss_pred EEcCCCCccch
Confidence 99999999864
No 37
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-34 Score=313.23 Aligned_cols=313 Identities=22% Similarity=0.218 Sum_probs=276.1
Q ss_pred CCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcE
Q 007553 17 CFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYD 96 (599)
Q Consensus 17 ~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 96 (599)
.+++++.+++.+ +.+....+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++
T Consensus 49 ~l~~l~~l~l~~-~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 127 (597)
T 3oja_B 49 TLNNQKIVTFKN-STMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 127 (597)
T ss_dssp GGCCCSEEEESS-CEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCCCceEEEeeC-CCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCE
Confidence 467889999998 7776555555788999999999999999888889999999999999999999888888999999999
Q ss_pred EEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccc
Q 007553 97 LRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNL 176 (599)
Q Consensus 97 L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~ 176 (599)
|+|++|.+.+..+..|.++++|++|++++|.+.+..|..+.++++|++|++++|.+++. .+..+++|+.|++++|.+
T Consensus 128 L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 128 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL 204 (597)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCC
T ss_pred EEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcc
Confidence 99999999976666689999999999999999998898999999999999999999875 356688999999999987
Q ss_pred cccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCccc
Q 007553 177 VGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREV 256 (599)
Q Consensus 177 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 256 (599)
.+ +...++|+.|++++|.+....+. ..+.|+.|++++|.+++. ..+..+++|+.|++++|.+.+..|..+
T Consensus 205 ~~-----l~~~~~L~~L~ls~n~l~~~~~~---~~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 274 (597)
T 3oja_B 205 ST-----LAIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPF 274 (597)
T ss_dssp SE-----EECCTTCSEEECCSSCCCEEECS---CCSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGG
T ss_pred cc-----ccCCchhheeeccCCcccccccc---cCCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHh
Confidence 64 34567899999999998754332 236899999999999864 678999999999999999999889999
Q ss_pred CCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCE
Q 007553 257 GNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQ 336 (599)
Q Consensus 257 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 336 (599)
..+++|+.|+|++|.+.+ +|..+..+++|+.|+|++|.+. .+|..+..+++|+.|++++|.+++. + +..+++|+.
T Consensus 275 ~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~ 349 (597)
T 3oja_B 275 VKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKN 349 (597)
T ss_dssp TTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSE
T ss_pred cCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCE
Confidence 999999999999999986 4666778999999999999998 5777788899999999999999854 2 677899999
Q ss_pred EeCCCccccccC
Q 007553 337 LDLSHNFINGTI 348 (599)
Q Consensus 337 L~l~~n~l~~~~ 348 (599)
|++++|.+.+..
T Consensus 350 L~l~~N~~~~~~ 361 (597)
T 3oja_B 350 LTLSHNDWDCNS 361 (597)
T ss_dssp EECCSSCEEHHH
T ss_pred EEeeCCCCCChh
Confidence 999999998653
No 38
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=5.2e-34 Score=297.31 Aligned_cols=324 Identities=23% Similarity=0.235 Sum_probs=271.1
Q ss_pred ecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCcccc
Q 007553 34 GRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIG 113 (599)
Q Consensus 34 ~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~ 113 (599)
+..+..++.+++|++|++++|.+++ +| .++.+++|++|++++|.+++. | ++.+++|++|++++|++.+. + ++
T Consensus 32 ~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~ 103 (457)
T 3bz5_A 32 ATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VT 103 (457)
T ss_dssp TTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CT
T ss_pred cccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cC
Confidence 3444567889999999999999996 45 689999999999999999964 4 89999999999999999875 3 89
Q ss_pred CCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEE
Q 007553 114 NLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSL 193 (599)
Q Consensus 114 ~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L 193 (599)
++++|++|++++|.+++. + ++.+++|++|++++|++++. .+..+++|++|++++|...+.+ .+..+++|++|
T Consensus 104 ~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L 175 (457)
T 3bz5_A 104 PLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTL 175 (457)
T ss_dssp TCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEE
Confidence 999999999999999964 4 89999999999999999974 3888999999999999766555 47889999999
Q ss_pred EccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCccee
Q 007553 194 LLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLI 273 (599)
Q Consensus 194 ~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 273 (599)
++++|.+++ +| +..++.|+.|++++|.+++. .+..+++|++|++++|.+++ +| +..+++|+.|++++|.++
T Consensus 176 ~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~ 246 (457)
T 3bz5_A 176 DCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLT 246 (457)
T ss_dssp ECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCS
T ss_pred ECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCC
Confidence 999999987 44 78899999999999999975 48899999999999999997 55 889999999999999999
Q ss_pred ecCCcCccCCC-------CCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCc--------cccCCCCCCEEe
Q 007553 274 GPIPPTIGYLT-------NLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPS--------EIGNLIHLRQLD 338 (599)
Q Consensus 274 ~~~~~~~~~~~-------~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~--------~~~~l~~L~~L~ 338 (599)
+..+..+..+. +|+.|++++|.+.+.+| +..+++|+.|++++|...+.+|. .+.++++|+.|+
T Consensus 247 ~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~ 324 (457)
T 3bz5_A 247 ELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLY 324 (457)
T ss_dssp CCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred CcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEE
Confidence 86544443333 45566666666555554 46789999999999987666553 255678999999
Q ss_pred CCCccccccCCcccCCCCCCCEEECCCCcCcccCCccCCCCCeeecccCcccee
Q 007553 339 LSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVFRVPGLKWSENNLEVE 392 (599)
Q Consensus 339 l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~~~~l~~~~n~~~~~ 392 (599)
+++|++++. + +..+++|+.|++++|++++. ..+..+..+.|.+.+.
T Consensus 325 L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~l-----~~L~~L~l~~n~l~g~ 370 (457)
T 3bz5_A 325 LNNTELTEL-D--VSHNTKLKSLSCVNAHIQDF-----SSVGKIPALNNNFEAE 370 (457)
T ss_dssp CTTCCCSCC-C--CTTCTTCSEEECCSSCCCBC-----TTGGGSSGGGTSEEEE
T ss_pred CCCCccccc-c--cccCCcCcEEECCCCCCCCc-----cccccccccCCcEEec
Confidence 999999974 3 88899999999999999873 3445667788888765
No 39
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.1e-33 Score=294.65 Aligned_cols=339 Identities=25% Similarity=0.297 Sum_probs=206.2
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCC-------------CEEEcccCcCcccCCcCCCCCCCC
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRL-------------KVLDLSYNRLTGTIPSEIGSLRDL 70 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L-------------~~L~l~~n~~~~~~~~~~~~l~~L 70 (599)
++++.++|. .++++++|++|++++ +.+.|.+|+.++.+++| ++|++++|.+++ +|.. .++|
T Consensus 20 ~n~l~~iP~-~i~~L~~L~~L~l~~-n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L 93 (454)
T 1jl5_A 20 SSNLTEMPV-EAENVKSKTEYYNAW-SEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHL 93 (454)
T ss_dssp ---------------CCHHHHHHHH-HHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTC
T ss_pred cCchhhCCh-hHhcccchhhhhccC-CcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCC
Confidence 344556664 377777777777777 77777777777776654 777777777763 4432 3577
Q ss_pred CEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccC
Q 007553 71 LELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNN 150 (599)
Q Consensus 71 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n 150 (599)
++|++++|.+++ +|.. +++|++|++++|++.+. |. + .++|++|++++|.+++ +| .++++++|++|++++|
T Consensus 94 ~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~-~--~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N 163 (454)
T 1jl5_A 94 ESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SD-L--PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNN 163 (454)
T ss_dssp SEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CS-C--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSS
T ss_pred CEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cC-C--CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCC
Confidence 777777777775 5533 36777777777777642 21 1 1577888888887775 55 4777788888888888
Q ss_pred ccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcc
Q 007553 151 NLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPP 230 (599)
Q Consensus 151 ~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 230 (599)
++++ +|.. .++|++|++++|.+.+ +| .++.+++|++|++++|.+++ +|.. .++|+.|++++|.+. .+|
T Consensus 164 ~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp- 231 (454)
T 1jl5_A 164 SLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE-ELP- 231 (454)
T ss_dssp CCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-SCC-
T ss_pred cCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC-ccc-
Confidence 7775 4433 2477788888877775 44 57777788888888877764 3322 247777788777777 555
Q ss_pred cCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCC
Q 007553 231 TIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQL 310 (599)
Q Consensus 231 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L 310 (599)
.+..+++|++|++++|.+++ +|.. +++|+.|++++|.+.+ +|.. +++|++|++++|.+++. |.. .++|
T Consensus 232 ~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L 299 (454)
T 1jl5_A 232 ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNL 299 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTC
T ss_pred ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcC
Confidence 37777788888888877774 3432 3667777777777764 3432 36677777777777652 110 1455
Q ss_pred CEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCccCCCCCeeecccCccc
Q 007553 311 QNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVFRVPGLKWSENNLE 390 (599)
Q Consensus 311 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~~~~l~~~~n~~~ 390 (599)
+.|++++|.+++. +. ..++|+.|++++|++++ +|.. +++|+.|++++|.+++ +|..+..++.+++++|++.
T Consensus 300 ~~L~l~~N~l~~i-~~---~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~~l~~L~~L~L~~N~l~ 370 (454)
T 1jl5_A 300 YYLNASSNEIRSL-CD---LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPELPQNLKQLHVEYNPLR 370 (454)
T ss_dssp CEEECCSSCCSEE-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS
T ss_pred CEEECcCCcCCcc-cC---CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccchhhhccEEECCCCCCC
Confidence 5666666655531 11 11356666666666653 3332 3556666666666653 3333444556666666655
Q ss_pred e
Q 007553 391 V 391 (599)
Q Consensus 391 ~ 391 (599)
+
T Consensus 371 ~ 371 (454)
T 1jl5_A 371 E 371 (454)
T ss_dssp S
T ss_pred c
Confidence 5
No 40
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6e-33 Score=278.33 Aligned_cols=287 Identities=23% Similarity=0.312 Sum_probs=186.0
Q ss_pred CCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeee
Q 007553 45 RLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLS 124 (599)
Q Consensus 45 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~ 124 (599)
++++++++++.++ .+|..+ .++|++|++++|.+++..|..|.++++|++|++++|++.+..|..|.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5777777777776 566544 3577778888877776666677777778888887777776667777777777777777
Q ss_pred cccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccc--cCccccCCCCCCCEEEccCCcccc
Q 007553 125 LNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVG--PLPKEVGNLKNLDSLLLNRNNLTG 202 (599)
Q Consensus 125 ~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~--~~~~~l~~l~~L~~L~l~~n~~~~ 202 (599)
+|.+. .+|..+. ++|++|++++|.++...+..|..+++|++|++++|.+.. ..+..+..+ +|++|++++|.+++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 77777 3444333 677777777777776555567777777777777777642 455556655 77777777777664
Q ss_pred cCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccC
Q 007553 203 PIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGY 282 (599)
Q Consensus 203 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 282 (599)
+|..+. +.|+.|++++|.+.+..+..+..+++|++|++++|.+.+..+..+..+++|+.|++++|.+. .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 333332 56677777777776665566666777777777777776655556666667777777776665 55666666
Q ss_pred CCCCCEEECCCCCCccCCCccCcC------CCCCCEEEcccCcCc--cCCCccccCCCCCCEEeCCCc
Q 007553 283 LTNLTSLNLGYNQLNSSIPPELMN------CSQLQNLAVNHNSLS--GSIPSEIGNLIHLRQLDLSHN 342 (599)
Q Consensus 283 ~~~L~~L~ls~n~~~~~~~~~~~~------l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~l~~n 342 (599)
+++|++|++++|.+++..+..+.. .+.|+.|++++|++. +..|..+..+++|+.+++++|
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 666777777766666554444432 234555555555544 334444555555555555544
No 41
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.6e-33 Score=289.89 Aligned_cols=329 Identities=26% Similarity=0.280 Sum_probs=254.3
Q ss_pred CCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCC-------------CEEeccCCccccc
Q 007553 17 CFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDL-------------LELNLSYNILNGS 83 (599)
Q Consensus 17 ~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L-------------~~L~L~~n~~~~~ 83 (599)
..++|++|++++ +.+ +.+|+.++++++|++|++++|.+++.+|..++.+.+| ++|++++|.+++
T Consensus 9 ~~~~L~~L~l~~-n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~- 85 (454)
T 1jl5_A 9 SNTFLQEPLRHS-SNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS- 85 (454)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-
T ss_pred ccccchhhhccc-Cch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-
Confidence 458999999998 888 8999999999999999999999999999999998865 999999999985
Q ss_pred CCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCC
Q 007553 84 IPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHL 163 (599)
Q Consensus 84 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l 163 (599)
+|.. .++|++|++++|.+.+ +|.. +++|++|++++|.+.+. +.. .++|++|++++|.+++ +| .|..+
T Consensus 86 lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l 152 (454)
T 1jl5_A 86 LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNS 152 (454)
T ss_dssp CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTC
T ss_pred CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCC
Confidence 4442 3789999999999997 5643 48999999999999853 321 2799999999999996 67 59999
Q ss_pred CCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEc
Q 007553 164 NQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDL 243 (599)
Q Consensus 164 ~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 243 (599)
++|++|++++|++.+ +|.. .++|++|++++|.+.+ +| .+..+++|+.|++++|.+.+ +|.. .++|++|++
T Consensus 153 ~~L~~L~l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l 222 (454)
T 1jl5_A 153 SFLKIIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVA 222 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEEC
T ss_pred CCCCEEECCCCcCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEEC
Confidence 999999999999986 5543 3599999999999987 55 58999999999999999985 4432 369999999
Q ss_pred cCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccC
Q 007553 244 SSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGS 323 (599)
Q Consensus 244 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 323 (599)
++|.+. .+| .+..+++|+.|++++|.+.+ +|.. +++|++|++++|.+.+ +|.. .++|+.|++++|.+++.
T Consensus 223 ~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l 292 (454)
T 1jl5_A 223 GNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL 292 (454)
T ss_dssp CSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE
T ss_pred cCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc
Confidence 999998 567 48999999999999999985 4442 4899999999999986 5543 47899999999999862
Q ss_pred CCccccCCCCCCEEeCCCccccccCCcccCCC-CCCCEEECCCCcCcccCCccCCCCCeeecccCccce
Q 007553 324 IPSEIGNLIHLRQLDLSHNFINGTIPSQLGKI-PNVSEVDVSKNNLSGVIPKSVFRVPGLKWSENNLEV 391 (599)
Q Consensus 324 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~-~~L~~L~ls~n~l~~~~~~~~~~~~~l~~~~n~~~~ 391 (599)
|.. .++|+.|++++|++++ ++ .+ ++|+.|++++|.+++ +|..+..++.+++++|.+..
T Consensus 293 -~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 293 -SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPALPPRLERLIASFNHLAE 351 (454)
T ss_dssp -SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC
T ss_pred -cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-ccccCCcCCEEECCCCcccc
Confidence 221 2689999999999985 22 23 589999999999997 67677888999999998874
No 42
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.8e-34 Score=283.28 Aligned_cols=249 Identities=33% Similarity=0.470 Sum_probs=132.2
Q ss_pred CCCCEEEcccCcCcc--cCCcCCCCCCCCCEEeccC-CcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCE
Q 007553 44 SRLKVLDLSYNRLTG--TIPSEIGSLRDLLELNLSY-NILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTH 120 (599)
Q Consensus 44 ~~L~~L~l~~n~~~~--~~~~~~~~l~~L~~L~L~~-n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~ 120 (599)
.+++.|+|++|.+++ .+|..|+.+++|++|++++ |.+.+.+|..|.++++|++|+|++|++.+.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 345555555555554 4555555555555555552 5555555555555555555555555555445555555555555
Q ss_pred EeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCC-CCCeeecccccccccCccccCCCCCCCEEEccCCc
Q 007553 121 LDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLN-QLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNN 199 (599)
Q Consensus 121 L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~-~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 199 (599)
|++++|.+.+.+|..+.++++|++|++++|.+++.+|..+..++ +|++|++++|.+.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~---------------------- 187 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT---------------------- 187 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEE----------------------
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeee----------------------
Confidence 55555555544555555555555555555555444444444444 4445555444444
Q ss_pred ccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcC
Q 007553 200 LTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPT 279 (599)
Q Consensus 200 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 279 (599)
+..|..+..++ |+.|++++|.+.+..+..+..+++|++|++++|.+++..|. +..+++|++|+|++|.+.+.+|..
T Consensus 188 --~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 263 (313)
T 1ogq_A 188 --GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG 263 (313)
T ss_dssp --EECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGG
T ss_pred --ccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChH
Confidence 44444444444 55555555555544555555555555555555555543333 445555555555555555555555
Q ss_pred ccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCc
Q 007553 280 IGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNS 319 (599)
Q Consensus 280 ~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~ 319 (599)
+..+++|++|++++|++++.+|.. ..+++|+.|++++|+
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred HhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 555555556666555555555543 455556666666654
No 43
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=7.2e-33 Score=277.77 Aligned_cols=304 Identities=21% Similarity=0.237 Sum_probs=253.9
Q ss_pred CCcccccccccccCC-----CCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCC
Q 007553 4 NGNAAELSQLNFTCF-----PNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYN 78 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l-----~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 78 (599)
.+++.++|......| .+++++++++ +.+. .+|..+ .++|++|++++|.+++..|..|.++++|++|++++|
T Consensus 13 ~~~l~~lp~~~~~~cp~~c~c~l~~l~~~~-~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 88 (332)
T 2ft3_A 13 IPDLDSLPPTYSAMCPFGCHCHLRVVQCSD-LGLK-AVPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNN 88 (332)
T ss_dssp ------------CCCCSSCEEETTEEECCS-SCCS-SCCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCccccCCCcccCCCCCCCcccCCEEECCC-CCcc-ccCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCC
Confidence 344555555433333 4799999998 7766 677766 368999999999999888889999999999999999
Q ss_pred cccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCC--CC
Q 007553 79 ILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTG--PI 156 (599)
Q Consensus 79 ~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~--~~ 156 (599)
.+++..|..|.++++|++|++++|++. .+|..+. ++|++|++++|.+....+..+.++++|++|++++|.++. ..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 165 (332)
T 2ft3_A 89 KISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFE 165 (332)
T ss_dssp CCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSC
T ss_pred ccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCC
Confidence 999888999999999999999999998 4555554 899999999999998777889999999999999999963 56
Q ss_pred cccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCC
Q 007553 157 PSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLT 236 (599)
Q Consensus 157 ~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 236 (599)
+..+..+ +|++|++++|.+.+ +|..+. ++|++|++++|.+.+..+..+..+++|+.|++++|.+.+..+..+..++
T Consensus 166 ~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 241 (332)
T 2ft3_A 166 PGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLP 241 (332)
T ss_dssp TTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCT
T ss_pred cccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCC
Confidence 7778887 99999999999986 555443 7999999999999988888999999999999999999988888899999
Q ss_pred CCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccC------CCCCCEEECCCCCCc--cCCCccCcCCC
Q 007553 237 YLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGY------LTNLTSLNLGYNQLN--SSIPPELMNCS 308 (599)
Q Consensus 237 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~------~~~L~~L~ls~n~~~--~~~~~~~~~l~ 308 (599)
+|++|++++|.++ .+|..+..+++|+.|++++|.+++..+..|.. ...|+.|++++|.+. +..|..+..++
T Consensus 242 ~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~ 320 (332)
T 2ft3_A 242 TLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVT 320 (332)
T ss_dssp TCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBC
T ss_pred CCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccc
Confidence 9999999999998 68888999999999999999999766665544 467999999999987 56778899999
Q ss_pred CCCEEEcccCc
Q 007553 309 QLQNLAVNHNS 319 (599)
Q Consensus 309 ~L~~L~l~~n~ 319 (599)
+|+.+++++|+
T Consensus 321 ~L~~l~l~~n~ 331 (332)
T 2ft3_A 321 DRLAIQFGNYK 331 (332)
T ss_dssp CSTTEEC----
T ss_pred hhhhhhccccc
Confidence 99999999885
No 44
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.9e-32 Score=274.45 Aligned_cols=288 Identities=25% Similarity=0.302 Sum_probs=165.7
Q ss_pred CCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeee
Q 007553 45 RLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLS 124 (599)
Q Consensus 45 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~ 124 (599)
++++++++++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|++++|++.+..|..|..+++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 6777788777776 5555442 577777887777776666677777777777777777776667777777777777777
Q ss_pred cccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccc--cCccccCCCCCCCEEEccCCcccc
Q 007553 125 LNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVG--PLPKEVGNLKNLDSLLLNRNNLTG 202 (599)
Q Consensus 125 ~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~--~~~~~l~~l~~L~~L~l~~n~~~~ 202 (599)
+|.++ .+|..+. ++|++|++++|.+++..+..|..+++|++|++++|.+.. ..+..+..+++|++|++++|.++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 77776 3343332 567777777776666555556666666666666666542 344455555566666655555542
Q ss_pred cCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccC
Q 007553 203 PIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGY 282 (599)
Q Consensus 203 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 282 (599)
+|..+. ++|+.|++++|.+. +..|..+..+++|+.|++++|.+.+..+..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~------------------------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 238 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKIT------------------------KVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 238 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCC------------------------EECTGGGTTCTTCCEEECCSSCCCEECTTTGGG
T ss_pred -CCcccc--ccCCEEECCCCcCC------------------------ccCHHHhcCCCCCCEEECCCCcCceeChhhccC
Confidence 222221 34444444444444 444444444444444444444444444444444
Q ss_pred CCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccC------CCCCCEEeCCCccccc--cCCcccCC
Q 007553 283 LTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGN------LIHLRQLDLSHNFING--TIPSQLGK 354 (599)
Q Consensus 283 ~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~------l~~L~~L~l~~n~l~~--~~~~~~~~ 354 (599)
+++|++|++++|.+. .+|..+..+++|+.|++++|.+++..+..+.. .+.++.+++++|.+.. ..|..+..
T Consensus 239 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccccc
Confidence 455555555555544 34444445555555555555554433333321 2456666666666542 34455666
Q ss_pred CCCCCEEECCCC
Q 007553 355 IPNVSEVDVSKN 366 (599)
Q Consensus 355 ~~~L~~L~ls~n 366 (599)
+.+++.+++++|
T Consensus 318 ~~~l~~l~L~~N 329 (330)
T 1xku_A 318 VYVRAAVQLGNY 329 (330)
T ss_dssp CCCGGGEEC---
T ss_pred ccceeEEEeccc
Confidence 666666666666
No 45
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.8e-32 Score=272.28 Aligned_cols=286 Identities=22% Similarity=0.273 Sum_probs=203.8
Q ss_pred CCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEec
Q 007553 68 RDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFL 147 (599)
Q Consensus 68 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l 147 (599)
.++++++++++.++ .+|..+. ++|++|++++|++.+..+..|.++++|++|++++|.+++..|..+.++++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 46777888777776 4555443 56777777777777665556777777777777777777666666777777777777
Q ss_pred ccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcc-
Q 007553 148 DNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDG- 226 (599)
Q Consensus 148 ~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~- 226 (599)
++|.++. +|..+. ++|++|++++|.+.+. .+..+..++.|+.|++++|.+..
T Consensus 108 s~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~------------------------~~~~~~~l~~L~~L~l~~n~l~~~ 160 (330)
T 1xku_A 108 SKNQLKE-LPEKMP--KTLQELRVHENEITKV------------------------RKSVFNGLNQMIVVELGTNPLKSS 160 (330)
T ss_dssp CSSCCSB-CCSSCC--TTCCEEECCSSCCCBB------------------------CHHHHTTCTTCCEEECCSSCCCGG
T ss_pred CCCcCCc-cChhhc--ccccEEECCCCccccc------------------------CHhHhcCCccccEEECCCCcCCcc
Confidence 7666652 333221 3455555555544444 44444455555555555555532
Q ss_pred -cCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCc
Q 007553 227 -PIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELM 305 (599)
Q Consensus 227 -~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~ 305 (599)
..+..+..+++|++|++++|.++. +|..+. ++|++|++++|.+.+..+..+..+++|++|++++|.+.+..+..+.
T Consensus 161 ~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 237 (330)
T 1xku_A 161 GIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 237 (330)
T ss_dssp GBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG
T ss_pred CcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhcc
Confidence 445566777777788888777774 444443 7899999999999988888999999999999999999988887899
Q ss_pred CCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCC------CCCCCEEECCCCcCcc--cCCccCC
Q 007553 306 NCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGK------IPNVSEVDVSKNNLSG--VIPKSVF 377 (599)
Q Consensus 306 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~------~~~L~~L~ls~n~l~~--~~~~~~~ 377 (599)
.+++|+.|++++|.++ .+|..+..+++|++|++++|++++..+..+.. .+.++.+++++|++.. ..|..+.
T Consensus 238 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~ 316 (330)
T 1xku_A 238 NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 316 (330)
T ss_dssp GSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGT
T ss_pred CCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccc
Confidence 9999999999999998 78888999999999999999999776666643 3678999999999864 3444443
Q ss_pred C---CCeeecccC
Q 007553 378 R---VPGLKWSEN 387 (599)
Q Consensus 378 ~---~~~l~~~~n 387 (599)
. +..+++++|
T Consensus 317 ~~~~l~~l~L~~N 329 (330)
T 1xku_A 317 CVYVRAAVQLGNY 329 (330)
T ss_dssp TCCCGGGEEC---
T ss_pred cccceeEEEeccc
Confidence 3 355666655
No 46
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.5e-33 Score=279.78 Aligned_cols=252 Identities=34% Similarity=0.554 Sum_probs=206.6
Q ss_pred CCCcEEEeecCcCCc--cCCccccCCCcCCEEeeec-ccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCe
Q 007553 92 KDLYDLRLQGNKLDG--LIPSSIGNLTNLTHLDLSL-NQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLST 168 (599)
Q Consensus 92 ~~L~~L~L~~n~~~~--~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~ 168 (599)
.++++|+|++|.+.+ .+|..|.++++|++|++++ |.+.+.+|..+.++++|++|++++|.+++.+|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356666666666665 5566666666666666663 6666666666666666666666666666666666667777777
Q ss_pred eecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCC-CCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCc
Q 007553 169 LYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLN-LLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQ 247 (599)
Q Consensus 169 L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 247 (599)
|++++|.+.+.+|..+..+++|++|++++|.+++.+|..+..++ .|+.|++++|.+.+..|..+..++ |++|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 77777777766777777778888888888888777788888887 899999999999999999999887 9999999999
Q ss_pred CCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCcc
Q 007553 248 LSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSE 327 (599)
Q Consensus 248 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 327 (599)
+++..|..+..+++|+.|+|++|.+.+.++. +..+++|++|++++|.+++.+|..+..+++|+.|++++|.+++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9999999999999999999999999877665 788999999999999999999999999999999999999999988886
Q ss_pred ccCCCCCCEEeCCCcc-ccc
Q 007553 328 IGNLIHLRQLDLSHNF-ING 346 (599)
Q Consensus 328 ~~~l~~L~~L~l~~n~-l~~ 346 (599)
..+++|+.+++++|+ +.|
T Consensus 288 -~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp -TTGGGSCGGGTCSSSEEES
T ss_pred -ccccccChHHhcCCCCccC
Confidence 889999999999998 443
No 47
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=8.9e-36 Score=313.42 Aligned_cols=369 Identities=22% Similarity=0.165 Sum_probs=274.5
Q ss_pred CCCCcEEeeCCCCCCeecCCcc-cCCCCCCCEEEcccCcCcc----cCCcCCCCCCCCCEEeccCCcccccCCccCC-CC
Q 007553 18 FPNLVTFRIWGTRFLSGRIPSE-TGALSRLKVLDLSYNRLTG----TIPSEIGSLRDLLELNLSYNILNGSIPLEFG-NL 91 (599)
Q Consensus 18 l~~L~~L~l~~~~~~~~~~~~~-~~~~~~L~~L~l~~n~~~~----~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~l 91 (599)
.++|++|++++ +.+++..... +..+++|++|++++|.+++ .++..+..+++|++|+|++|.+.+..+..+. .+
T Consensus 2 ~~~l~~L~Ls~-~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l 80 (461)
T 1z7x_W 2 SLDIQSLDIQC-EELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGL 80 (461)
T ss_dssp CEEEEEEEEES-CCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTT
T ss_pred Cccceehhhhh-cccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHH
Confidence 36788999987 7776543333 6778899999999999874 3456677889999999999988764443332 34
Q ss_pred C----CCcEEEeecCcCCc----cCCccccCCCcCCEEeeecccccccCCccc-----cCCCcccEEecccCccCCCC--
Q 007553 92 K----DLYDLRLQGNKLDG----LIPSSIGNLTNLTHLDLSLNQLSGRLPQEV-----GNLKNLVSLFLDNNNLTGPI-- 156 (599)
Q Consensus 92 ~----~L~~L~L~~n~~~~----~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l-----~~l~~L~~L~l~~n~i~~~~-- 156 (599)
+ +|++|++++|++.. .++..+..+++|++|++++|.+.+..+..+ ...++|++|++++|.+++..
T Consensus 81 ~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 81 QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp CSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred hhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH
Confidence 4 69999999999874 357788899999999999998875443332 23568999999999888643
Q ss_pred --cccccCCCCCCeeecccccccccCccccC-----CCCCCCEEEccCCccccc----CchhccCCCCCCEEeCCCCcCc
Q 007553 157 --PSTLYHLNQLSTLYLAYNNLVGPLPKEVG-----NLKNLDSLLLNRNNLTGP----IPSTIGFLNLLDELRLSHNRLD 225 (599)
Q Consensus 157 --~~~l~~l~~L~~L~l~~n~~~~~~~~~l~-----~l~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~l~~n~l~ 225 (599)
+..+..+++|++|++++|.+....+..+. ..++|++|++++|.+++. ++..+..+++|+.|++++|.+.
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 55667788999999999987754333332 356899999999988763 4667778899999999999887
Q ss_pred ccC-----cccCCCCCCCCEEEccCCcCCCC----CCcccCCCCCCCEEeccCcceeecCCcCcc-----CCCCCCEEEC
Q 007553 226 GPI-----PPTIGNLTYLTSLDLSSNQLSGL----LPREVGNLKYLDSLSLDRNNLIGPIPPTIG-----YLTNLTSLNL 291 (599)
Q Consensus 226 ~~~-----~~~~~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~-----~~~~L~~L~l 291 (599)
+.. +..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+.+..+..+. ..++|++|++
T Consensus 241 ~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 320 (461)
T 1z7x_W 241 DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 320 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEc
Confidence 542 22344688999999999988864 466677789999999999988754332222 2368999999
Q ss_pred CCCCCccC----CCccCcCCCCCCEEEcccCcCccCCCccccC-----CCCCCEEeCCCccccc----cCCcccCCCCCC
Q 007553 292 GYNQLNSS----IPPELMNCSQLQNLAVNHNSLSGSIPSEIGN-----LIHLRQLDLSHNFING----TIPSQLGKIPNV 358 (599)
Q Consensus 292 s~n~~~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-----l~~L~~L~l~~n~l~~----~~~~~~~~~~~L 358 (599)
++|.+++. ++..+..+++|+.|++++|.+++..+..+.. .++|++|++++|.+++ .+|..+..+++|
T Consensus 321 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L 400 (461)
T 1z7x_W 321 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL 400 (461)
T ss_dssp TTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC
T ss_pred CCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCc
Confidence 99998765 4455667789999999999887654444432 6789999999999986 677778788999
Q ss_pred CEEECCCCcCccc--------CCccCCCCCeeecccC
Q 007553 359 SEVDVSKNNLSGV--------IPKSVFRVPGLKWSEN 387 (599)
Q Consensus 359 ~~L~ls~n~l~~~--------~~~~~~~~~~l~~~~n 387 (599)
+.|++++|++++. +|.....+..+.+.++
T Consensus 401 ~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~ 437 (461)
T 1z7x_W 401 RELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDI 437 (461)
T ss_dssp CEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTC
T ss_pred cEEECCCCCCCHHHHHHHHHHhccCCcchhheeeccc
Confidence 9999999988765 3333344555555444
No 48
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.1e-34 Score=302.96 Aligned_cols=368 Identities=19% Similarity=0.144 Sum_probs=284.9
Q ss_pred Cccccccccc-ccCCCCCcEEeeCCCCCCee----cCCcccCCCCCCCEEEcccCcCcccCCcCC-CCCC----CCCEEe
Q 007553 5 GNAAELSQLN-FTCFPNLVTFRIWGTRFLSG----RIPSETGALSRLKVLDLSYNRLTGTIPSEI-GSLR----DLLELN 74 (599)
Q Consensus 5 ~~~~~~~~~~-l~~l~~L~~L~l~~~~~~~~----~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~-~~l~----~L~~L~ 74 (599)
+++.+..... +..+++|++|++++ +.+.+ .++..+..+++|++|++++|.+++..+..+ ..++ +|++|+
T Consensus 13 ~~l~~~~~~~~~~~~~~L~~L~L~~-~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~ 91 (461)
T 1z7x_W 13 EELSDARWAELLPLLQQCQVVRLDD-CGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLS 91 (461)
T ss_dssp CCCCHHHHHHHHHHHTTCSEEEEES-SCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEE
T ss_pred cccCchhHHHHHhhcCCccEEEccC-CCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEE
Confidence 3444444444 77899999999999 77764 456778889999999999999976444333 2344 799999
Q ss_pred ccCCcccc----cCCccCCCCCCCcEEEeecCcCCccCCcccc-----CCCcCCEEeeecccccccC----CccccCCCc
Q 007553 75 LSYNILNG----SIPLEFGNLKDLYDLRLQGNKLDGLIPSSIG-----NLTNLTHLDLSLNQLSGRL----PQEVGNLKN 141 (599)
Q Consensus 75 L~~n~~~~----~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~-----~l~~L~~L~l~~n~i~~~~----~~~l~~l~~ 141 (599)
|++|.++. .++..|..+++|++|++++|.+.+..+..+. ..++|++|++++|.+++.. +..+..+++
T Consensus 92 L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 171 (461)
T 1z7x_W 92 LQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPD 171 (461)
T ss_dssp CTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTT
T ss_pred ccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCC
Confidence 99999984 4588899999999999999998754333332 3568999999999998643 566778899
Q ss_pred ccEEecccCccCCCCccccc-----CCCCCCeeeccccccccc----CccccCCCCCCCEEEccCCcccccC-----chh
Q 007553 142 LVSLFLDNNNLTGPIPSTLY-----HLNQLSTLYLAYNNLVGP----LPKEVGNLKNLDSLLLNRNNLTGPI-----PST 207 (599)
Q Consensus 142 L~~L~l~~n~i~~~~~~~l~-----~l~~L~~L~l~~n~~~~~----~~~~l~~l~~L~~L~l~~n~~~~~~-----~~~ 207 (599)
|++|++++|.++...+..+. ..++|++|++++|.+... ++..+..+++|++|++++|.+.+.. +..
T Consensus 172 L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~ 251 (461)
T 1z7x_W 172 FKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGL 251 (461)
T ss_dssp CCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHH
T ss_pred CCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHH
Confidence 99999999998765443332 366999999999998863 4667788999999999999887532 223
Q ss_pred ccCCCCCCEEeCCCCcCccc----CcccCCCCCCCCEEEccCCcCCCCCCcccC-----CCCCCCEEeccCcceeec---
Q 007553 208 IGFLNLLDELRLSHNRLDGP----IPPTIGNLTYLTSLDLSSNQLSGLLPREVG-----NLKYLDSLSLDRNNLIGP--- 275 (599)
Q Consensus 208 ~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-----~l~~L~~L~L~~n~l~~~--- 275 (599)
+..++.|+.|++++|.+++. ++..+..+++|++|++++|.+.+..+..+. ..++|+.|++++|.+++.
T Consensus 252 ~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 331 (461)
T 1z7x_W 252 LHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCS 331 (461)
T ss_dssp TSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred hcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHH
Confidence 34688999999999999864 566777899999999999998754333332 336999999999999865
Q ss_pred -CCcCccCCCCCCEEECCCCCCccCCCccCc-----CCCCCCEEEcccCcCcc----CCCccccCCCCCCEEeCCCcccc
Q 007553 276 -IPPTIGYLTNLTSLNLGYNQLNSSIPPELM-----NCSQLQNLAVNHNSLSG----SIPSEIGNLIHLRQLDLSHNFIN 345 (599)
Q Consensus 276 -~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~-----~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~ 345 (599)
++..+..+++|++|++++|.+.+..+..+. ..++|+.|++++|.+++ .+|..+..+++|++|++++|+++
T Consensus 332 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 332 HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 455667789999999999999865443332 26799999999999986 67888888999999999999998
Q ss_pred ccCCc----cc-CCCCCCCEEECCCCcCcccCC
Q 007553 346 GTIPS----QL-GKIPNVSEVDVSKNNLSGVIP 373 (599)
Q Consensus 346 ~~~~~----~~-~~~~~L~~L~ls~n~l~~~~~ 373 (599)
+.... .+ .....|+.|++.++.+....+
T Consensus 412 ~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~ 444 (461)
T 1z7x_W 412 DAGILQLVESVRQPGCLLEQLVLYDIYWSEEME 444 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHH
T ss_pred HHHHHHHHHHhccCCcchhheeecccccCHHHH
Confidence 54221 12 224578899998887765443
No 49
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.5e-30 Score=260.47 Aligned_cols=277 Identities=21% Similarity=0.228 Sum_probs=171.3
Q ss_pred CCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCE
Q 007553 41 GALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTH 120 (599)
Q Consensus 41 ~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~ 120 (599)
..|+...+.+++++.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|++.+..|..|.++++|++
T Consensus 28 ~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp CEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 34556666777777776 5565443 47777777777777665557777777777777777777666667777777777
Q ss_pred EeeecccccccCCccccCCCcccEEecccCccCCCCc-ccccCCCCCCeeeccccc-ccccCccccCCCCCCCEEEccCC
Q 007553 121 LDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIP-STLYHLNQLSTLYLAYNN-LVGPLPKEVGNLKNLDSLLLNRN 198 (599)
Q Consensus 121 L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~l~~n~-~~~~~~~~l~~l~~L~~L~l~~n 198 (599)
|++++|.+++..+..+.++++|++|++++|+++...+ ..+..+++|++|++++|. +....+..+..+++|++|++++|
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 7777777775555557777777777777777764433 356677777777777773 55455566677777777777777
Q ss_pred cccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccC---CCCCCCEEeccCcceee-
Q 007553 199 NLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVG---NLKYLDSLSLDRNNLIG- 274 (599)
Q Consensus 199 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~---~l~~L~~L~L~~n~l~~- 274 (599)
.+.+..+..+..+++|+.|++++|.+.......+..+++|++|++++|.+++..+..+. ..+.++.+++.++.+.+
T Consensus 185 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~ 264 (353)
T 2z80_A 185 DLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE 264 (353)
T ss_dssp TCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH
T ss_pred CcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc
Confidence 77766666677777777777777776533333344466777777777777654333222 23445555555554443
Q ss_pred ---cCCcCccCCCCCCEEECCCCCCccCCCcc-CcCCCCCCEEEcccCcCc
Q 007553 275 ---PIPPTIGYLTNLTSLNLGYNQLNSSIPPE-LMNCSQLQNLAVNHNSLS 321 (599)
Q Consensus 275 ---~~~~~~~~~~~L~~L~ls~n~~~~~~~~~-~~~l~~L~~L~l~~n~l~ 321 (599)
.+|..+..+++|++|++++|+++. +|.. +..+++|+.|++++|++.
T Consensus 265 ~l~~l~~~l~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~~~ 314 (353)
T 2z80_A 265 SLFQVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWD 314 (353)
T ss_dssp HHHHHHHHHHTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBC
T ss_pred chhhhHHHHhcccCCCEEECCCCCCCc-cCHHHHhcCCCCCEEEeeCCCcc
Confidence 233344445555555555555542 2222 344444444444444444
No 50
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=9.6e-30 Score=252.01 Aligned_cols=280 Identities=24% Similarity=0.234 Sum_probs=145.8
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCcc--CCccccCCCcCCEEeee
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGL--IPSSIGNLTNLTHLDLS 124 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~--~~~~~~~l~~L~~L~l~ 124 (599)
+.++++++.++ .+|..+ .++|++|+|++|.++...+..|.++++|++|++++|++... .+..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 45666666666 455433 25677777777777644444466777777777777766532 24455556666666666
Q ss_pred cccccccCCccccCCCcccEEecccCccCCCCc-ccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccc-
Q 007553 125 LNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIP-STLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTG- 202 (599)
Q Consensus 125 ~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~- 202 (599)
+|.+. .+|..+.++++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..+..+..+++|++|++++|.+.+
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 66665 344446666666666666666654433 345555566666666555555544555555555555555555543
Q ss_pred cCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccC
Q 007553 203 PIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGY 282 (599)
Q Consensus 203 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 282 (599)
..|..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+++..+. .+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~------------------------~~~~ 221 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF------------------------PYKC 221 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSG------------------------GGTT
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChh------------------------hccC
Confidence 2344444444444444444444444344444444444444444444433333 3444
Q ss_pred CCCCCEEECCCCCCccCCCccCcCCC-CCCEEEcccCcCccCCC--ccccCCCCCCEEeCCCccccccCCcccCC
Q 007553 283 LTNLTSLNLGYNQLNSSIPPELMNCS-QLQNLAVNHNSLSGSIP--SEIGNLIHLRQLDLSHNFINGTIPSQLGK 354 (599)
Q Consensus 283 ~~~L~~L~ls~n~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 354 (599)
+++|++|++++|.+.+..|..+..++ +|+.|++++|.+.+..+ .....+...+.+.+..+.+....|..+..
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 44455555555555444444444442 45555555555543211 01112223333444445555555554443
No 51
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=7.1e-30 Score=258.26 Aligned_cols=279 Identities=23% Similarity=0.207 Sum_probs=234.7
Q ss_pred CCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcE
Q 007553 17 CFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYD 96 (599)
Q Consensus 17 ~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 96 (599)
.|+...+.+.++ +.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.+++..|..|.++++|++
T Consensus 29 ~C~~~~~c~~~~-~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 29 SCDRNGICKGSS-GSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp EECTTSEEECCS-TTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCeEeeCCC-CCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 456666788887 7766 6776654 58999999999999777778999999999999999999888888999999999
Q ss_pred EEeecCcCCccCCccccCCCcCCEEeeecccccccCC-ccccCCCcccEEecccCc-cCCCCcccccCCCCCCeeecccc
Q 007553 97 LRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLP-QEVGNLKNLVSLFLDNNN-LTGPIPSTLYHLNQLSTLYLAYN 174 (599)
Q Consensus 97 L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~l~~n~-i~~~~~~~l~~l~~L~~L~l~~n 174 (599)
|++++|++++..+..|.++++|++|++++|.+....+ ..+.++++|++|++++|+ +....+..|..+++|++|++++|
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 9999999997655668999999999999999986544 478999999999999994 66666778999999999999999
Q ss_pred cccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccC---CCCCCCCEEEccCCcCCC-
Q 007553 175 NLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTI---GNLTYLTSLDLSSNQLSG- 250 (599)
Q Consensus 175 ~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~- 250 (599)
.+.+..|..+..+++|++|++++|.+.......+..+++|+.|++++|.+++..+..+ ...+.++.++++++.+.+
T Consensus 185 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~ 264 (353)
T 2z80_A 185 DLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE 264 (353)
T ss_dssp TCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH
T ss_pred CcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc
Confidence 9998888999999999999999999875444445668999999999999987654433 346788999999998876
Q ss_pred ---CCCcccCCCCCCCEEeccCcceeecCCcC-ccCCCCCCEEECCCCCCccCC
Q 007553 251 ---LLPREVGNLKYLDSLSLDRNNLIGPIPPT-IGYLTNLTSLNLGYNQLNSSI 300 (599)
Q Consensus 251 ---~~~~~l~~l~~L~~L~L~~n~l~~~~~~~-~~~~~~L~~L~ls~n~~~~~~ 300 (599)
.+|..+..+++|+.|++++|.++ .+|.. |..+++|++|++++|.+.+..
T Consensus 265 ~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 265 SLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp HHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred chhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 36777889999999999999998 55555 588999999999999988643
No 52
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.5e-29 Score=248.98 Aligned_cols=281 Identities=25% Similarity=0.223 Sum_probs=190.7
Q ss_pred CEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeeccccccc--CCccccCCCcccEEecc
Q 007553 71 LELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGR--LPQEVGNLKNLVSLFLD 148 (599)
Q Consensus 71 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~--~~~~l~~l~~L~~L~l~ 148 (599)
+.++++++.++ .+|..+. ++|++|++++|++....+..|.++++|++|++++|.+... .+..+.++++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 45666666665 3444332 4566666666666544334455666666666666655422 13334445555555555
Q ss_pred cCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCc-hhccCCCCCCEEeCCCCcCccc
Q 007553 149 NNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIP-STIGFLNLLDELRLSHNRLDGP 227 (599)
Q Consensus 149 ~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~-~~~~~l~~L~~L~l~~n~l~~~ 227 (599)
+|.+.. ++ ..+..+++|++|++++|.+.+..+ ..+..+++|+.|++++|.+.+.
T Consensus 87 ~n~i~~-l~------------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 141 (306)
T 2z66_A 87 FNGVIT-MS------------------------SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 141 (306)
T ss_dssp SCSEEE-EE------------------------EEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEEC
T ss_pred CCcccc-Ch------------------------hhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCcc
Confidence 554442 23 334445555555555555543332 3455666667777777776666
Q ss_pred CcccCCCCCCCCEEEccCCcCCC-CCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcC
Q 007553 228 IPPTIGNLTYLTSLDLSSNQLSG-LLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMN 306 (599)
Q Consensus 228 ~~~~~~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~ 306 (599)
.+..+..+++|++|++++|.+.+ ..|..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+++..+..+..
T Consensus 142 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 142 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp STTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred chhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 66677777888888888887775 46777888888999999999888877888888999999999999999877778899
Q ss_pred CCCCCEEEcccCcCccCCCccccCCC-CCCEEeCCCccccccCCc--ccCCCCCCCEEECCCCcCcccCCccCCCC
Q 007553 307 CSQLQNLAVNHNSLSGSIPSEIGNLI-HLRQLDLSHNFINGTIPS--QLGKIPNVSEVDVSKNNLSGVIPKSVFRV 379 (599)
Q Consensus 307 l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~--~~~~~~~L~~L~ls~n~l~~~~~~~~~~~ 379 (599)
+++|+.|++++|.+++..|..+..++ +|+.|++++|.+++..+. ....+...+.+.+..+.+.|..|..+...
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~ 297 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGM 297 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTC
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCc
Confidence 99999999999999999898888884 999999999999865321 11122334445666788888888776554
No 53
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=6.3e-29 Score=247.85 Aligned_cols=226 Identities=23% Similarity=0.257 Sum_probs=168.1
Q ss_pred CCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEe
Q 007553 43 LSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLD 122 (599)
Q Consensus 43 ~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~ 122 (599)
.++++.|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..|+++++|++|+|++|.+. .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 356677777777776 56666666777777777777776 66666777777777777777776 5566677777777777
Q ss_pred eecccccccCCcccc---------CCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEE
Q 007553 123 LSLNQLSGRLPQEVG---------NLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSL 193 (599)
Q Consensus 123 l~~n~i~~~~~~~l~---------~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L 193 (599)
+++|++.+.+|..+. ++++|++|++++|.++ .+|..+..+++|++|++++|.+.+ +|..+..+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 777666666665544 3778888888888777 567777778888888888887775 45567778888888
Q ss_pred EccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCccee
Q 007553 194 LLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLI 273 (599)
Q Consensus 194 ~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 273 (599)
++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|++|++++|.+.+.+|..+..+++|+.+++..+.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 88888777777777888888888888888887788877888888888888888888888888888888888888766543
No 54
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=6.4e-29 Score=247.80 Aligned_cols=226 Identities=24% Similarity=0.300 Sum_probs=172.7
Q ss_pred CCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEe
Q 007553 67 LRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLF 146 (599)
Q Consensus 67 l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~ 146 (599)
.+++++|+|++|.++ .+|..+.++++|++|+|++|.+. .+|..++++++|++|++++|.+. .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 467778888888777 56767777888888888888777 66777777888888888888777 5677777788888888
Q ss_pred cccCccCCCCcccccC---------CCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEE
Q 007553 147 LDNNNLTGPIPSTLYH---------LNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDEL 217 (599)
Q Consensus 147 l~~n~i~~~~~~~l~~---------l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 217 (599)
+++|++.+.+|..+.. +++|++|++++|.+. .+|..+..+++|++|++++|.+++ +|..+..+++|+.|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 8887777777766543 777888888888777 566677777888888888887774 55567777788888
Q ss_pred eCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCc
Q 007553 218 RLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLN 297 (599)
Q Consensus 218 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~ 297 (599)
++++|.+.+.+|..+..+++|++|++++|.+.+.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.+++..+.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 88887777777777777888888888887777777777777888888888887777777877878888888877765443
No 55
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=5.8e-28 Score=252.61 Aligned_cols=249 Identities=24% Similarity=0.204 Sum_probs=200.8
Q ss_pred CCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeee
Q 007553 45 RLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLS 124 (599)
Q Consensus 45 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~ 124 (599)
..+.+++++..++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++.+..+..|.++++|++|+++
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 3567888888877 5665443 678888888888887778888888888888888888887777788888888888888
Q ss_pred cccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccccc-ccccCccccCCCCCCCEEEccCCccccc
Q 007553 125 LNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNN-LVGPLPKEVGNLKNLDSLLLNRNNLTGP 203 (599)
Q Consensus 125 ~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~-~~~~~~~~l~~l~~L~~L~l~~n~~~~~ 203 (599)
+|.++...++.+.++++|++|++++|.++...+..|..+++|++|++++|. +....+..|..+++|++|++++|.+++.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 888887777778888888888888888886666678888888888888844 4433444678888888888888888753
Q ss_pred CchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCC
Q 007553 204 IPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYL 283 (599)
Q Consensus 204 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~ 283 (599)
| .+..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+++..+..|..+++|+.|+|++|.+++..+..+..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 3 47778888899999998888888888888999999999998888888888888999999999998887666777888
Q ss_pred CCCCEEECCCCCCcc
Q 007553 284 TNLTSLNLGYNQLNS 298 (599)
Q Consensus 284 ~~L~~L~ls~n~~~~ 298 (599)
++|+.|++++|.+.-
T Consensus 290 ~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 290 RYLVELHLHHNPWNC 304 (452)
T ss_dssp TTCCEEECCSSCEEC
T ss_pred cCCCEEEccCCCcCC
Confidence 899999999887753
No 56
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=5.6e-29 Score=243.78 Aligned_cols=225 Identities=27% Similarity=0.285 Sum_probs=146.4
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecc
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLN 126 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n 126 (599)
++++++++.++ .+|..+ .++|++|++++|.+++..+..|.++++|++|++++|.+.+..|..|..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56666666665 444332 356667777777666655556666667777777776666655666666666777777666
Q ss_pred c-ccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCc
Q 007553 127 Q-LSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIP 205 (599)
Q Consensus 127 ~-i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~ 205 (599)
. +....|..+.++++|++|++++|.+++..+..|..+++|++|++++|.+.+..+..+..+++|++|++++|.+++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 555556666666777777777776666556666666677777777666665555556666667777777766665544
Q ss_pred hhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceee
Q 007553 206 STIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIG 274 (599)
Q Consensus 206 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 274 (599)
..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+..
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 556666666777777766666666666666777777777777665544556666666667666666654
No 57
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=6.9e-28 Score=251.10 Aligned_cols=248 Identities=26% Similarity=0.239 Sum_probs=211.3
Q ss_pred CCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeee
Q 007553 45 RLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLS 124 (599)
Q Consensus 45 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~ 124 (599)
..+.+++++..++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|++.+..+..|.++++|++|+++
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4678888888887 6776553 688999999999988888888999999999999999887777888899999999999
Q ss_pred cccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccccc-ccccCccccCCCCCCCEEEccCCccccc
Q 007553 125 LNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNN-LVGPLPKEVGNLKNLDSLLLNRNNLTGP 203 (599)
Q Consensus 125 ~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~-~~~~~~~~l~~l~~L~~L~l~~n~~~~~ 203 (599)
+|.++...++.+.++++|++|++++|.++...+..|..+++|++|++++|. +....+..|..+++|++|++++|.++.
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~- 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE- 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-
Confidence 999887777778899999999999999887767788889999999998854 443444578889999999999998874
Q ss_pred CchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCC
Q 007553 204 IPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYL 283 (599)
Q Consensus 204 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~ 283 (599)
+| .+..+++|+.|+|++|.+++..+..|..+++|++|++++|.+++..+..|..+++|+.|+|++|.+++..+..+..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 44 47788899999999999998888889999999999999999998888889999999999999999987777778889
Q ss_pred CCCCEEECCCCCCc
Q 007553 284 TNLTSLNLGYNQLN 297 (599)
Q Consensus 284 ~~L~~L~ls~n~~~ 297 (599)
++|+.|+|++|.+.
T Consensus 279 ~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 279 HHLERIHLHHNPWN 292 (440)
T ss_dssp TTCCEEECCSSCEE
T ss_pred cCCCEEEcCCCCcc
Confidence 99999999999875
No 58
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=4.8e-28 Score=253.25 Aligned_cols=248 Identities=21% Similarity=0.180 Sum_probs=216.1
Q ss_pred CCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecc
Q 007553 69 DLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLD 148 (599)
Q Consensus 69 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~ 148 (599)
..+.++.++..++ .+|..+. ++|++|+|++|.+.+..+..|.++++|++|++++|.+.+..+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4578888888887 5676554 689999999999998888889999999999999999998888889999999999999
Q ss_pred cCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCc-ccccCchhccCCCCCCEEeCCCCcCccc
Q 007553 149 NNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNN-LTGPIPSTIGFLNLLDELRLSHNRLDGP 227 (599)
Q Consensus 149 ~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~-~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 227 (599)
+|.++...+..|..+++|++|+|++|.+....+..|..+++|++|++++|. +....+..+..+++|+.|++++|.+.+.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 999997777778899999999999999987777788999999999999854 4434445688899999999999999854
Q ss_pred CcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCC
Q 007553 228 IPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNC 307 (599)
Q Consensus 228 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l 307 (599)
| .+..+++|++|++++|.+++..|..|..+++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..+..+..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 4 58889999999999999998888899999999999999999998888889999999999999999987777778889
Q ss_pred CCCCEEEcccCcCc
Q 007553 308 SQLQNLAVNHNSLS 321 (599)
Q Consensus 308 ~~L~~L~l~~n~l~ 321 (599)
++|+.|++++|++.
T Consensus 290 ~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 290 RYLVELHLHHNPWN 303 (452)
T ss_dssp TTCCEEECCSSCEE
T ss_pred cCCCEEEccCCCcC
Confidence 99999999999875
No 59
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=8.8e-28 Score=250.33 Aligned_cols=248 Identities=23% Similarity=0.230 Sum_probs=217.1
Q ss_pred CCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecc
Q 007553 69 DLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLD 148 (599)
Q Consensus 69 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~ 148 (599)
..+.++.++..++ .+|..+. ++++.|+|++|++....+..|.++++|++|++++|.+....++.|.++++|++|+++
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4678888888888 6676664 689999999999998888889999999999999999998888889999999999999
Q ss_pred cCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCc-ccccCchhccCCCCCCEEeCCCCcCccc
Q 007553 149 NNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNN-LTGPIPSTIGFLNLLDELRLSHNRLDGP 227 (599)
Q Consensus 149 ~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~-~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 227 (599)
+|+++...+..|..+++|++|+|++|.+....+..|..+++|++|++++|. +....+..+..+++|+.|++++|.++ .
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-E 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-S
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-c
Confidence 999997777789999999999999999988777788999999999999854 44344457888999999999999998 4
Q ss_pred CcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCC
Q 007553 228 IPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNC 307 (599)
Q Consensus 228 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l 307 (599)
+| .+..+++|++|++++|.+++..|..|..+++|+.|+|++|.+.+..+..|..+++|++|+|++|++++..+..+..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 44 58889999999999999998888899999999999999999998888889999999999999999998777778889
Q ss_pred CCCCEEEcccCcCc
Q 007553 308 SQLQNLAVNHNSLS 321 (599)
Q Consensus 308 ~~L~~L~l~~n~l~ 321 (599)
++|+.|+|++|++.
T Consensus 279 ~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 279 HHLERIHLHHNPWN 292 (440)
T ss_dssp TTCCEEECCSSCEE
T ss_pred cCCCEEEcCCCCcc
Confidence 99999999999875
No 60
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=9.5e-29 Score=242.14 Aligned_cols=254 Identities=24% Similarity=0.234 Sum_probs=212.1
Q ss_pred cEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeec
Q 007553 22 VTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQG 101 (599)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 101 (599)
++++..+ +.++ .+|..+ .++|++|++++|.+++..+..|..+++|++|++++|.+++..|..|.++++|++|++++
T Consensus 14 ~~~~c~~-~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQ-QGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCS-SCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCc-CCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 6777776 6665 556544 46899999999999987778899999999999999999988888999999999999999
Q ss_pred Cc-CCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccC
Q 007553 102 NK-LDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPL 180 (599)
Q Consensus 102 n~-~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~ 180 (599)
|+ +....|..|..+++|++|++++|.+.+..+..+.++++|++|++++|.+++..+..|..+++|++|++++|.+.+..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 97 77666888999999999999999999888888999999999999999999877777899999999999999998777
Q ss_pred ccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCC
Q 007553 181 PKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLK 260 (599)
Q Consensus 181 ~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 260 (599)
+..+..+++|++|++++|.+.+..+..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+....+.. ....
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHH
Confidence 777899999999999999999888899999999999999999999877777999999999999999987543211 0011
Q ss_pred CCCEEeccCcceeecCCcCc
Q 007553 261 YLDSLSLDRNNLIGPIPPTI 280 (599)
Q Consensus 261 ~L~~L~L~~n~l~~~~~~~~ 280 (599)
.++.+....+.+....|..+
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHCCSEECCCBEEESGGG
T ss_pred HHHhcccccCccccCCchHh
Confidence 23333445555555555544
No 61
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.8e-29 Score=249.06 Aligned_cols=249 Identities=22% Similarity=0.218 Sum_probs=193.4
Q ss_pred cCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCccc-ccCCccCC-------CCCCCcEEEeecCcCCccCCcc
Q 007553 40 TGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILN-GSIPLEFG-------NLKDLYDLRLQGNKLDGLIPSS 111 (599)
Q Consensus 40 ~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~-~~~p~~~~-------~l~~L~~L~L~~n~~~~~~~~~ 111 (599)
++..++|+.|++++|.+ .+|..+... |++|+|++|.+. ..+|..+. ++++|++|+|++|++.+.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34566788888888888 566655433 888888888884 34555444 6788888888888888777776
Q ss_pred c--cCCCcCCEEeeecccccccCCccccCC-----CcccEEecccCccCCCCcccccCCCCCCeeeccccccccc--Ccc
Q 007553 112 I--GNLTNLTHLDLSLNQLSGRLPQEVGNL-----KNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGP--LPK 182 (599)
Q Consensus 112 ~--~~l~~L~~L~l~~n~i~~~~~~~l~~l-----~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~--~~~ 182 (599)
+ ..+++|++|++++|.+++. |..+..+ ++|++|++++|++++..+..|..+++|++|++++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5 7888888888888888866 6667766 8888888888888877777888888888888888887653 233
Q ss_pred cc--CCCCCCCEEEccCCcccc--cCc-hhccCCCCCCEEeCCCCcCcccCc-ccCCCCCCCCEEEccCCcCCCCCCccc
Q 007553 183 EV--GNLKNLDSLLLNRNNLTG--PIP-STIGFLNLLDELRLSHNRLDGPIP-PTIGNLTYLTSLDLSSNQLSGLLPREV 256 (599)
Q Consensus 183 ~l--~~l~~L~~L~l~~n~~~~--~~~-~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~l 256 (599)
.+ ..+++|++|++++|.+++ ..+ ..+..+++|+.|++++|.+.+..| ..+..+++|++|++++|.++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 34 788899999999998873 222 344677899999999999987664 45667889999999999998 677766
Q ss_pred CCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCcc
Q 007553 257 GNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNS 298 (599)
Q Consensus 257 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~ 298 (599)
. ++|+.|+|++|++++. |. +..+++|++|++++|++++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5 7899999999999866 55 8889999999999998875
No 62
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=5e-29 Score=247.20 Aligned_cols=249 Identities=24% Similarity=0.267 Sum_probs=209.3
Q ss_pred CCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCC-ccCCcccc-------CCCcCCEEeeecccccccCCcc
Q 007553 64 IGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLD-GLIPSSIG-------NLTNLTHLDLSLNQLSGRLPQE 135 (599)
Q Consensus 64 ~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~-~~~~~~~~-------~l~~L~~L~l~~n~i~~~~~~~ 135 (599)
++..++|++|++++|.+ .+|..+... |++|+|++|.+. ..+|..+. ++++|++|++++|.+++..|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45667899999999999 677766544 899999999984 34565555 7899999999999999888887
Q ss_pred c--cCCCcccEEecccCccCCCCcccccCC-----CCCCeeecccccccccCccccCCCCCCCEEEccCCccccc--Cch
Q 007553 136 V--GNLKNLVSLFLDNNNLTGPIPSTLYHL-----NQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGP--IPS 206 (599)
Q Consensus 136 l--~~l~~L~~L~l~~n~i~~~~~~~l~~l-----~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~--~~~ 206 (599)
+ ..+++|++|++++|.+++. |..+..+ ++|++|++++|.+.+..+..++.+++|++|++++|.+.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 8999999999999999987 7777766 8999999999999988888999999999999999997764 333
Q ss_pred hc--cCCCCCCEEeCCCCcCccc--C-cccCCCCCCCCEEEccCCcCCCCCC-cccCCCCCCCEEeccCcceeecCCcCc
Q 007553 207 TI--GFLNLLDELRLSHNRLDGP--I-PPTIGNLTYLTSLDLSSNQLSGLLP-REVGNLKYLDSLSLDRNNLIGPIPPTI 280 (599)
Q Consensus 207 ~~--~~l~~L~~L~l~~n~l~~~--~-~~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~ 280 (599)
.+ ..+++|+.|++++|.+++. . ...+..+++|++|++++|.+++..| ..+..+++|+.|+|++|.++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 44 7889999999999999832 2 2345678999999999999998764 45677899999999999998 777776
Q ss_pred cCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCcc
Q 007553 281 GYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSG 322 (599)
Q Consensus 281 ~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 322 (599)
. ++|++|++++|++++. |. +..+++|+.|++++|.+++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5 8999999999999876 55 8899999999999999875
No 63
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=3.1e-29 Score=249.31 Aligned_cols=254 Identities=21% Similarity=0.185 Sum_probs=113.1
Q ss_pred EEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccc
Q 007553 49 LDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQL 128 (599)
Q Consensus 49 L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i 128 (599)
++++.+.+....+..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++.+..+ +..+++|++|++++|.+
T Consensus 15 ~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l 92 (317)
T 3o53_A 15 EKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV 92 (317)
T ss_dssp ESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEE
T ss_pred eeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcc
Confidence 3344444332222333334445555555554444434444445555555555554443322 44444555555555444
Q ss_pred cccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhc
Q 007553 129 SGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTI 208 (599)
Q Consensus 129 ~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~ 208 (599)
++.. ..++|++|++++|.+++..+. .+++|++|++++|.+.+..+..+..+++|++|++++|.+.+..+..+
T Consensus 93 ~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 164 (317)
T 3o53_A 93 QELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164 (317)
T ss_dssp EEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred cccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHH
Confidence 4221 124455555555544433221 13344444444444444333344444444444444444443333322
Q ss_pred -cCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCC
Q 007553 209 -GFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLT 287 (599)
Q Consensus 209 -~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~ 287 (599)
..++.|+.|++++|.+++. + .... +++|+.|+|++|.+.+. +..+..+++|+
T Consensus 165 ~~~l~~L~~L~L~~N~l~~~-~-~~~~------------------------l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~ 217 (317)
T 3o53_A 165 AASSDTLEHLNLQYNFIYDV-K-GQVV------------------------FAKLKTLDLSSNKLAFM-GPEFQSAAGVT 217 (317)
T ss_dssp GGGTTTCCEEECTTSCCCEE-E-CCCC------------------------CTTCCEEECCSSCCCEE-CGGGGGGTTCS
T ss_pred hhccCcCCEEECCCCcCccc-c-cccc------------------------cccCCEEECCCCcCCcc-hhhhcccCccc
Confidence 2334444444444444322 1 1122 44444444444444432 22244455555
Q ss_pred EEECCCCCCccCCCccCcCCCCCCEEEcccCcCc-cCCCccccCCCCCCEEeCC
Q 007553 288 SLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLS-GSIPSEIGNLIHLRQLDLS 340 (599)
Q Consensus 288 ~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~ 340 (599)
+|++++|.+++ +|..+..+++|+.|++++|.+. +.++..+..+++|+.+++.
T Consensus 218 ~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 218 WISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp EEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred EEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 55555555542 3444555555555555555555 4444555555555555555
No 64
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=8.4e-26 Score=242.20 Aligned_cols=264 Identities=28% Similarity=0.337 Sum_probs=146.6
Q ss_pred CCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeee
Q 007553 45 RLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLS 124 (599)
Q Consensus 45 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~ 124 (599)
++++|++++|.++ .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|++++ +|. .+++|++|+++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 4666666666666 5555443 56666666666666 3443 35666666666666653 333 45666666666
Q ss_pred cccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccC
Q 007553 125 LNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPI 204 (599)
Q Consensus 125 ~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~ 204 (599)
+|.+++. |. .+++|+.|++++|+++. +|.. +++|++|++++|.+.+. |. .+++|+.|++++|.+++ +
T Consensus 110 ~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-C
Confidence 6666642 22 44666666666666654 3332 35666666666665532 22 23456666666666553 3
Q ss_pred chhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCC
Q 007553 205 PSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLT 284 (599)
Q Consensus 205 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 284 (599)
| ..+++|+.|++++|.+++ +|. .+++|+.|++++|.++. +|. .+++|+.|+|++|.+++ +| ..++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~ 241 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPS 241 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCT
T ss_pred c---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCC
Confidence 3 334556666666666553 222 23556666666666553 332 13456666666665553 33 2345
Q ss_pred CCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCccc
Q 007553 285 NLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQL 352 (599)
Q Consensus 285 ~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 352 (599)
+|+.|++++|.++. +|. .+++|+.|++++|.++ .+|..+..+++|+.|++++|.+++..|..+
T Consensus 242 ~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l 304 (622)
T 3g06_A 242 ELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 304 (622)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHH
T ss_pred cCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHH
Confidence 56666666666552 333 3455666666666655 445555556666666666666655544443
No 65
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-28 Score=244.77 Aligned_cols=265 Identities=22% Similarity=0.222 Sum_probs=178.5
Q ss_pred EEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCc
Q 007553 72 ELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNN 151 (599)
Q Consensus 72 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~ 151 (599)
.++++.+.+....+..+..+++|++|+|++|++.+..|..|..+++|++|++++|.+++..+
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~------------------ 75 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD------------------ 75 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE------------------
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh------------------
Confidence 33444444443333333444455555555555554444445555555555555555443322
Q ss_pred cCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCccc
Q 007553 152 LTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPT 231 (599)
Q Consensus 152 i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 231 (599)
+..+++|++|++++|.+.+.. ..++|++|++++|.+++..+. .+++|+.|++++|.+++..+..
T Consensus 76 --------~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~ 139 (317)
T 3o53_A 76 --------LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLD 139 (317)
T ss_dssp --------ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBC
T ss_pred --------hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchh
Confidence 444455555555555444221 125666666666665543332 2456777777777777666667
Q ss_pred CCCCCCCCEEEccCCcCCCCCCccc-CCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCC
Q 007553 232 IGNLTYLTSLDLSSNQLSGLLPREV-GNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQL 310 (599)
Q Consensus 232 ~~~l~~L~~L~l~~n~l~~~~~~~l-~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L 310 (599)
+..+++|++|++++|.+++..+..+ ..+++|++|+|++|.+++.. ....+++|++|++++|.+++. |..+..+++|
T Consensus 140 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L 216 (317)
T 3o53_A 140 EGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGV 216 (317)
T ss_dssp TGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTC
T ss_pred hhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcc-hhhhcccCcc
Confidence 7778888888888888877666655 36788999999999887652 233589999999999999864 5568899999
Q ss_pred CEEEcccCcCccCCCccccCCCCCCEEeCCCcccc-ccCCcccCCCCCCCEEECCC-CcCcccCCc
Q 007553 311 QNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFIN-GTIPSQLGKIPNVSEVDVSK-NNLSGVIPK 374 (599)
Q Consensus 311 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~ls~-n~l~~~~~~ 374 (599)
+.|++++|.++ .+|..+..+++|+.|++++|.++ +.++..+..++.|+.+++++ +.+++..|.
T Consensus 217 ~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 217 TWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp SEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 99999999999 56778899999999999999999 77888888899999999984 445555544
No 66
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=1.5e-25 Score=240.33 Aligned_cols=267 Identities=28% Similarity=0.333 Sum_probs=223.9
Q ss_pred CCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEec
Q 007553 68 RDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFL 147 (599)
Q Consensus 68 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l 147 (599)
.++++|++++|.++ .+|..+. ++|++|+|++|.++. +|. .+++|++|++++|.++. +|. .+++|++|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 46999999999999 6777665 899999999999984 554 57999999999999984 554 7799999999
Q ss_pred ccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCccc
Q 007553 148 DNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGP 227 (599)
Q Consensus 148 ~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 227 (599)
++|.+++. |. .+++|+.|++++|.+.. +|.. +++|++|++++|.+++ +|. .+.+|+.|++++|.+++
T Consensus 109 s~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 109 FSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp CSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-
T ss_pred cCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-
Confidence 99999864 44 57899999999999886 4443 4899999999999985 343 35789999999999985
Q ss_pred CcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCC
Q 007553 228 IPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNC 307 (599)
Q Consensus 228 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l 307 (599)
+| ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++ .+|.. +++|+.|++++|.+++ +| ..+
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l 240 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLP 240 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCC
T ss_pred Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCC
Confidence 45 567899999999999985 4443 478999999999988 44543 5889999999999986 55 456
Q ss_pred CCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCCccCCC
Q 007553 308 SQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIPKSVFR 378 (599)
Q Consensus 308 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~ 378 (599)
++|+.|++++|.++ .+|. .+++|+.|++++|+++ .+|..+..+++|+.|++++|++++..|..+..
T Consensus 241 ~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~ 306 (622)
T 3g06_A 241 SELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 306 (622)
T ss_dssp TTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHH
T ss_pred CcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHh
Confidence 89999999999998 4555 5789999999999999 77888999999999999999999887765543
No 67
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=4.6e-27 Score=247.10 Aligned_cols=232 Identities=24% Similarity=0.228 Sum_probs=102.3
Q ss_pred cCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEcc
Q 007553 117 NLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLN 196 (599)
Q Consensus 117 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~ 196 (599)
+|++|++++|.+.+..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|.+.+.. ..++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 44444444444444444444444444444444444443322 444444555555444444221 11444555555
Q ss_pred CCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccC-CCCCCCEEeccCcceeec
Q 007553 197 RNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVG-NLKYLDSLSLDRNNLIGP 275 (599)
Q Consensus 197 ~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-~l~~L~~L~L~~n~l~~~ 275 (599)
+|.+++..+. .+++|+.|++++|.+++..|..+..+++|++|++++|.+++..|..+. .+++|+.|+|++|.+++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 5444433222 223444555555555444444444445555555555554444444433 344445555554444433
Q ss_pred CCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCcccc-ccCCcccCC
Q 007553 276 IPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFIN-GTIPSQLGK 354 (599)
Q Consensus 276 ~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~ 354 (599)
.+ ...+++|++|+|++|.+++. |..+..+++|+.|++++|.+++ +|..+..+++|+.|++++|.+. +.+|..+..
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred cc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 11 12244444455544444432 2224444444444444444442 3333444444444444444444 333333333
Q ss_pred CCCCCEEE
Q 007553 355 IPNVSEVD 362 (599)
Q Consensus 355 ~~~L~~L~ 362 (599)
++.++.++
T Consensus 261 l~~L~~l~ 268 (487)
T 3oja_A 261 NQRVQTVA 268 (487)
T ss_dssp CHHHHHHH
T ss_pred CCCCcEEe
Confidence 33333333
No 68
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2.1e-27 Score=249.61 Aligned_cols=215 Identities=25% Similarity=0.233 Sum_probs=90.5
Q ss_pred CCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecc
Q 007553 69 DLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLD 148 (599)
Q Consensus 69 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~ 148 (599)
+|++|+|++|.+++..|..|..+++|++|+|++|.+.+..| +..+++|++|++++|.+++.. ..++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 34444444444443333334444444444444444333222 334444444444444433211 11444444444
Q ss_pred cCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhcc-CCCCCCEEeCCCCcCccc
Q 007553 149 NNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIG-FLNLLDELRLSHNRLDGP 227 (599)
Q Consensus 149 ~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~-~l~~L~~L~l~~n~l~~~ 227 (599)
+|.+++..+. .+++|++|++++|.+.+..|..++.+++|++|++++|.+++..|..+. .++.|+.|+|++|.+++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 4444433221 233444444444444444444444444444444444444443333332 344444444544444433
Q ss_pred CcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCc
Q 007553 228 IPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLN 297 (599)
Q Consensus 228 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~ 297 (599)
+ .+..+++|+.|++++|.+++. |..+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+.
T Consensus 185 -~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 185 -K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp -E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred -c-ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 1 122344555555555555432 2224444444445554444442 3333444444444444444443
No 69
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4e-25 Score=215.23 Aligned_cols=133 Identities=26% Similarity=0.285 Sum_probs=61.3
Q ss_pred CCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeee
Q 007553 45 RLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLS 124 (599)
Q Consensus 45 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~ 124 (599)
+|++|++++|.+++..+..|.++++|++|++++|.+++..+..|.++++|++|++++|++.+..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555554444444555555555555555544444444455555555555555444444444444444444444
Q ss_pred cccccccCCccccCCCcccEEecccCccCCC-CcccccCCCCCCeeeccccccc
Q 007553 125 LNQLSGRLPQEVGNLKNLVSLFLDNNNLTGP-IPSTLYHLNQLSTLYLAYNNLV 177 (599)
Q Consensus 125 ~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~l~~n~~~ 177 (599)
+|.+.+..+..+.++++|++|++++|.+++. +|..+..+++|++|++++|.+.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC
Confidence 4444433333344444444444444444332 2333444444444444444433
No 70
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4.6e-25 Score=214.79 Aligned_cols=226 Identities=23% Similarity=0.226 Sum_probs=186.7
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecc
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLN 126 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n 126 (599)
...+..+..++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|++.+..+..|.++++|++|++++|
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp TEEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred ceEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 35666677676 5666553 57999999999998777778899999999999999998777778899999999999999
Q ss_pred cccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccccccccc-CccccCCCCCCCEEEccCCcccccCc
Q 007553 127 QLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGP-LPKEVGNLKNLDSLLLNRNNLTGPIP 205 (599)
Q Consensus 127 ~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~-~~~~l~~l~~L~~L~l~~n~~~~~~~ 205 (599)
.+.+..++.+.++++|++|++++|.+.+..+..+..+++|++|++++|.+.+. +|..+..+++|++|++++|.+++..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 99888888899999999999999999877666788899999999999998764 57888899999999999999887766
Q ss_pred hhccCCCCCC----EEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecC
Q 007553 206 STIGFLNLLD----ELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPI 276 (599)
Q Consensus 206 ~~~~~l~~L~----~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 276 (599)
..+..+..|+ .|++++|.+.+..+..+ ...+|++|++++|.+++..+..+..+++|+.|++++|.+.+..
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred HHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 6676666666 89999999986555444 3458999999999998766667788999999999999887643
No 71
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.93 E-value=3.8e-29 Score=271.41 Aligned_cols=379 Identities=16% Similarity=0.105 Sum_probs=196.7
Q ss_pred cccccCCCCCcEEeeCCCCCCe--ecCCcccC------------CCCCCCEEEcccCcCcccCCcCCCC-CCC-CCEEec
Q 007553 12 QLNFTCFPNLVTFRIWGTRFLS--GRIPSETG------------ALSRLKVLDLSYNRLTGTIPSEIGS-LRD-LLELNL 75 (599)
Q Consensus 12 ~~~l~~l~~L~~L~l~~~~~~~--~~~~~~~~------------~~~~L~~L~l~~n~~~~~~~~~~~~-l~~-L~~L~L 75 (599)
...+.++++|++|++.+|..+. +.+|..++ .+++|++|+|++|.+++..+..+.. +++ |++|+|
T Consensus 66 ~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L 145 (592)
T 3ogk_B 66 DRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKL 145 (592)
T ss_dssp HHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEE
T ss_pred HHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEEC
Confidence 3445666777777776633221 23333333 5667777777777665544444433 233 666666
Q ss_pred cCCcc-cc-cCCccCCCCCCCcEEEeecCcCCcc----CCccccCCCcCCEEeeecccccc----cCCccccCCCcccEE
Q 007553 76 SYNIL-NG-SIPLEFGNLKDLYDLRLQGNKLDGL----IPSSIGNLTNLTHLDLSLNQLSG----RLPQEVGNLKNLVSL 145 (599)
Q Consensus 76 ~~n~~-~~-~~p~~~~~l~~L~~L~L~~n~~~~~----~~~~~~~l~~L~~L~l~~n~i~~----~~~~~l~~l~~L~~L 145 (599)
++|.. +. .++....++++|++|+|++|.+.+. ++..+..+++|++|++++|.+.+ .++..+.++++|++|
T Consensus 146 ~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L 225 (592)
T 3ogk_B 146 DKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSV 225 (592)
T ss_dssp ESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEE
T ss_pred cCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEE
Confidence 66641 11 1111123556666666666655433 22233455666666666665542 223334455666666
Q ss_pred ecccCccCCCCcccccCCCCCCeeecccccc--------------------------cccCccccCCCCCCCEEEccCCc
Q 007553 146 FLDNNNLTGPIPSTLYHLNQLSTLYLAYNNL--------------------------VGPLPKEVGNLKNLDSLLLNRNN 199 (599)
Q Consensus 146 ~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~--------------------------~~~~~~~l~~l~~L~~L~l~~n~ 199 (599)
++++|.+.+ ++..+..+++|++|+++.... ...++..+..+++|++|++++|.
T Consensus 226 ~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~ 304 (592)
T 3ogk_B 226 KVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYAL 304 (592)
T ss_dssp ECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCC
T ss_pred eccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCc
Confidence 666665543 344455555555555543211 11233334445555555555555
Q ss_pred ccccCc-hhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccC-----------CcCCCC-CCcccCCCCCCCEEe
Q 007553 200 LTGPIP-STIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSS-----------NQLSGL-LPREVGNLKYLDSLS 266 (599)
Q Consensus 200 ~~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~-----------n~l~~~-~~~~l~~l~~L~~L~ 266 (599)
+++... ..+..+++|+.|+++++-..+.++..+..+++|++|++++ +.+++. ++.....+++|++|+
T Consensus 305 l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~ 384 (592)
T 3ogk_B 305 LETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMA 384 (592)
T ss_dssp CCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEE
T ss_pred CCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEE
Confidence 433221 2234555555555552211112222234456666666662 333322 111123466677777
Q ss_pred ccCcceeecCCcCccC-CCCCCEEECC----CCCCccC-----CCccCcCCCCCCEEEcccCc--CccCCCcccc-CCCC
Q 007553 267 LDRNNLIGPIPPTIGY-LTNLTSLNLG----YNQLNSS-----IPPELMNCSQLQNLAVNHNS--LSGSIPSEIG-NLIH 333 (599)
Q Consensus 267 L~~n~l~~~~~~~~~~-~~~L~~L~ls----~n~~~~~-----~~~~~~~l~~L~~L~l~~n~--l~~~~~~~~~-~l~~ 333 (599)
++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|+.|++++|. +++..+..+. .+++
T Consensus 385 l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~ 464 (592)
T 3ogk_B 385 VYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPN 464 (592)
T ss_dssp EEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTT
T ss_pred eecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCcc
Confidence 7666666544444433 6677777774 4555542 11224456777777776433 4443333332 3677
Q ss_pred CCEEeCCCccccc-cCCcccCCCCCCCEEECCCCcCcccCCc----cCCCCCeeecccCccce
Q 007553 334 LRQLDLSHNFING-TIPSQLGKIPNVSEVDVSKNNLSGVIPK----SVFRVPGLKWSENNLEV 391 (599)
Q Consensus 334 L~~L~l~~n~l~~-~~~~~~~~~~~L~~L~ls~n~l~~~~~~----~~~~~~~l~~~~n~~~~ 391 (599)
|+.|++++|.+++ .++..+..+++|+.|++++|.+++.... .+..++.+++++|+++.
T Consensus 465 L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 465 VRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp CCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred ceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 8888888887765 2344456677788888888877544221 23456777777776543
No 72
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.9e-24 Score=209.61 Aligned_cols=202 Identities=30% Similarity=0.314 Sum_probs=101.7
Q ss_pred CCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeec
Q 007553 46 LKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSL 125 (599)
Q Consensus 46 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~ 125 (599)
.++++++++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|++++|++....+..|..+++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 344444444444 2333221 3444444444444433333444444444444444444433333344444455555555
Q ss_pred ccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCc
Q 007553 126 NQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIP 205 (599)
Q Consensus 126 n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~ 205 (599)
|.+....+..+.++++|++|++++|.+++..+..|..+++|++|++++|.+.+..+..|..+++|++|++++|.+++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 44444444444445555555555555554444444555555555555555554444445555555555555555554444
Q ss_pred hhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCC
Q 007553 206 STIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSG 250 (599)
Q Consensus 206 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 250 (599)
..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+..
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 445555666666666666654444456666666666666666543
No 73
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.93 E-value=6.3e-29 Score=269.72 Aligned_cols=353 Identities=13% Similarity=0.063 Sum_probs=234.9
Q ss_pred CCCCCcEEeeCCCCCCeecCCcccCC-CCC-CCEEEcccCc-Ccc-cCCcCCCCCCCCCEEeccCCcccccC----CccC
Q 007553 17 CFPNLVTFRIWGTRFLSGRIPSETGA-LSR-LKVLDLSYNR-LTG-TIPSEIGSLRDLLELNLSYNILNGSI----PLEF 88 (599)
Q Consensus 17 ~l~~L~~L~l~~~~~~~~~~~~~~~~-~~~-L~~L~l~~n~-~~~-~~~~~~~~l~~L~~L~L~~n~~~~~~----p~~~ 88 (599)
++++|++|++++ +.+++..+..+.. ++. |++|+|++|. ++. .++.....+++|++|+|++|.+++.. +..+
T Consensus 110 ~~~~L~~L~L~~-~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~ 188 (592)
T 3ogk_B 110 NLRQLKSVHFRR-MIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELA 188 (592)
T ss_dssp HCTTCCEEEEES-CBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHH
T ss_pred hCCCCCeEEeec-cEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHH
Confidence 678888888887 6666555555544 333 7777777665 211 11122235677777777777665432 2223
Q ss_pred CCCCCCcEEEeecCcCCc----cCCccccCCCcCCEEeeecccccccCCccccCCCc-----------------------
Q 007553 89 GNLKDLYDLRLQGNKLDG----LIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKN----------------------- 141 (599)
Q Consensus 89 ~~l~~L~~L~L~~n~~~~----~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~----------------------- 141 (599)
..+++|++|++++|.+.+ .++..+.++++|++|++++|.+.+ ++..+.++++
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~ 267 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLV 267 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCC
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhh
Confidence 456667777777666652 223334456667777766666553 3344444444
Q ss_pred ----ccEEecccCccCCCCcccccCCCCCCeeecccccccccCc-cccCCCCCCCEEEccCCcccccCchhccCCCCCCE
Q 007553 142 ----LVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLP-KEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDE 216 (599)
Q Consensus 142 ----L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~-~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 216 (599)
|+.|+++++. ...+|..+..+++|++|++++|.+.+... ..+..+++|++|++..+...+.++..+..+++|+.
T Consensus 268 ~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 268 FPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp CCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCE
T ss_pred ccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCE
Confidence 4444444432 23456667788999999999998664333 34688999999999944333334445567899999
Q ss_pred EeCCC-----------CcCccc-CcccCCCCCCCCEEEccCCcCCCCCCcccCC-CCCCCEEecc----Ccceeec----
Q 007553 217 LRLSH-----------NRLDGP-IPPTIGNLTYLTSLDLSSNQLSGLLPREVGN-LKYLDSLSLD----RNNLIGP---- 275 (599)
Q Consensus 217 L~l~~-----------n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~-l~~L~~L~L~----~n~l~~~---- 275 (599)
|++++ +.+++. +......+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++.
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred EEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 99993 455533 2222456899999999999998766666655 8899999996 5566642
Q ss_pred -CCcCccCCCCCCEEECCCCC--CccCCCccC-cCCCCCCEEEcccCcCcc-CCCccccCCCCCCEEeCCCcccccc-CC
Q 007553 276 -IPPTIGYLTNLTSLNLGYNQ--LNSSIPPEL-MNCSQLQNLAVNHNSLSG-SIPSEIGNLIHLRQLDLSHNFINGT-IP 349 (599)
Q Consensus 276 -~~~~~~~~~~L~~L~ls~n~--~~~~~~~~~-~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~-~~ 349 (599)
++..+..+++|++|++++|. +++..+..+ ..+++|+.|++++|.+++ .++..+..+++|+.|++++|.+++. ++
T Consensus 427 ~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 506 (592)
T 3ogk_B 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIA 506 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHH
T ss_pred HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHH
Confidence 22335668999999998654 554433333 347899999999999876 3445567889999999999998754 34
Q ss_pred cccCCCCCCCEEECCCCcCcccC
Q 007553 350 SQLGKIPNVSEVDVSKNNLSGVI 372 (599)
Q Consensus 350 ~~~~~~~~L~~L~ls~n~l~~~~ 372 (599)
.....+++|+.|++++|+++...
T Consensus 507 ~~~~~l~~L~~L~ls~n~it~~~ 529 (592)
T 3ogk_B 507 AAVTKLPSLRYLWVQGYRASMTG 529 (592)
T ss_dssp HHHHHCSSCCEEEEESCBCCTTC
T ss_pred HHHHhcCccCeeECcCCcCCHHH
Confidence 44567899999999999988663
No 74
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=6.8e-24 Score=205.66 Aligned_cols=216 Identities=28% Similarity=0.270 Sum_probs=139.6
Q ss_pred cccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCC
Q 007553 6 NAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIP 85 (599)
Q Consensus 6 ~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p 85 (599)
+....+.....+....+++++++ +.++ .+|..+. ++|++|++++|.+++..+..|..+++|++|++++|.++...+
T Consensus 3 ~~C~~~~~~C~c~~~~~~l~~~~-~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNNKNSVDCSS-KKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCBGGGTCSBEEETTTTEEECTT-SCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred ccCCCCCCCCEeCCCCCEEEccC-CCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 33333333344445566677766 5555 3554442 466777777777765555566677777777777777765555
Q ss_pred ccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCC
Q 007553 86 LEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQ 165 (599)
Q Consensus 86 ~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 165 (599)
..|.++++|++|++++|++....+..|..+++|++|++++|.++...+..+.++++|++|++++|.+++..+..|..+++
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 158 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTS 158 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcc
Confidence 55666777777777777776555556666777777777777776666666667777777777777766555555666777
Q ss_pred CCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCc
Q 007553 166 LSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLD 225 (599)
Q Consensus 166 L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~ 225 (599)
|++|++++|.+.+..+..|..+++|++|++++|.+++..+..+..++.|+.|++++|.+.
T Consensus 159 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 159 LKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 777777777766655555666777777777777766555555666677777777777665
No 75
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.2e-24 Score=209.27 Aligned_cols=229 Identities=24% Similarity=0.247 Sum_probs=170.8
Q ss_pred CCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEE
Q 007553 19 PNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLR 98 (599)
Q Consensus 19 ~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 98 (599)
+.+..+++.. +.+.+.. ....+++|+.|++++|.++. ++ .+..+++|++|++++|.+++. ..+..+++|++|+
T Consensus 19 ~~l~~l~l~~-~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 19 AETIKANLKK-KSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHTC-SCTTSEE--CHHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEE
T ss_pred HHHHHHHhcC-ccccccc--ccccccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEE
Confidence 3444555555 4443332 24567788888888887763 33 467788888888888887752 3677788888888
Q ss_pred eecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccc
Q 007553 99 LQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVG 178 (599)
Q Consensus 99 L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~ 178 (599)
+++|.+.+..+..|..+++|++|++++|.+.+..+..+.++++|++|++++|.+++..+..|..+++|++|++++|.+.+
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 88888877666667788888888888888887767777888888888888888887666667788888888888888887
Q ss_pred cCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCC
Q 007553 179 PLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGN 258 (599)
Q Consensus 179 ~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~ 258 (599)
..+..+..+++|++|++++|.+.+..+..+..+++|+.|++++|.+.+ .+++|+.|+++.|.++|.+|.+++.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccc
Confidence 666667788888888888888887777777888888888888887663 3557788888888888888887776
Q ss_pred CCC
Q 007553 259 LKY 261 (599)
Q Consensus 259 l~~ 261 (599)
++.
T Consensus 245 ~~~ 247 (272)
T 3rfs_A 245 VAP 247 (272)
T ss_dssp BCG
T ss_pred cCC
Confidence 543
No 76
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.4e-24 Score=210.60 Aligned_cols=224 Identities=26% Similarity=0.237 Sum_probs=132.4
Q ss_pred CCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeee
Q 007553 45 RLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLS 124 (599)
Q Consensus 45 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~ 124 (599)
.+..+++..+.+.+.. ....+++|+.|++++|.++. + ..+..+++|++|++++|.+.+. ..+..+++|++|+++
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 3444555555555332 24556777777777777663 2 2466677777777777776642 356667777777777
Q ss_pred cccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccC
Q 007553 125 LNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPI 204 (599)
Q Consensus 125 ~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~ 204 (599)
+|.+++..+..+.++++|++|++++|.+++..+..|..+++|++|++++|.+.+..+..+..+++|++|++++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccC
Confidence 77776655555666677777777776666555555666666666666666666555555556666666666666655544
Q ss_pred chhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCcc
Q 007553 205 PSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIG 281 (599)
Q Consensus 205 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~ 281 (599)
+..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+.+. ++.|+.|+++.|.++|.+|.+++
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccc
Confidence 44455555555555555555554444455555555555555554422 23445555555555555554443
No 77
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.1e-23 Score=203.90 Aligned_cols=202 Identities=30% Similarity=0.267 Sum_probs=99.3
Q ss_pred cCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCC
Q 007553 40 TGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLT 119 (599)
Q Consensus 40 ~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~ 119 (599)
++++++++.++++++.++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|.+++..+ .+.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 344555566666665555 3443332 455566666666555555555555666666666655553322 24455555
Q ss_pred EEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCc
Q 007553 120 HLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNN 199 (599)
Q Consensus 120 ~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 199 (599)
+|++++|.+. .+|..+.++++|++|++++|++++..+..|..+++|++|++++|.+.+..+..|..+++|+.|++++|.
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 5555555554 334444555555555555555554444445555555555555555544433444444444545444444
Q ss_pred ccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcC
Q 007553 200 LTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQL 248 (599)
Q Consensus 200 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 248 (599)
+++..+..+..+++|+.|++++|.++ .+|..+..+++|+.|++++|.+
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 44333333344444444444444444 3333333344444444444443
No 78
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=3.6e-23 Score=202.29 Aligned_cols=205 Identities=29% Similarity=0.257 Sum_probs=184.3
Q ss_pred cccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCC
Q 007553 14 NFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKD 93 (599)
Q Consensus 14 ~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~ 93 (599)
.++++++++++++.+ +.++ .+|..+. +++++|+|++|.+++..+..|..+++|++|+|++|.+++..+ ...+++
T Consensus 5 ~~~~l~~l~~l~~~~-~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~ 78 (290)
T 1p9a_G 5 EVSKVASHLEVNCDK-RNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPV 78 (290)
T ss_dssp EEECSTTCCEEECTT-SCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTT
T ss_pred cccccCCccEEECCC-CCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCc
Confidence 378899999999998 8877 6676663 689999999999998888899999999999999999996544 378999
Q ss_pred CcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccc
Q 007553 94 LYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAY 173 (599)
Q Consensus 94 L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~ 173 (599)
|++|++++|++. .+|..+..+++|++|++++|+++...++.|.++++|++|++++|++++..+..|..+++|+.|+|++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 999999999998 5678899999999999999999988888899999999999999999988777889999999999999
Q ss_pred ccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcc
Q 007553 174 NNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDG 226 (599)
Q Consensus 174 n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 226 (599)
|++....+..|..+++|++|++++|.++ .+|..+.....|+.|++++|.+..
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 9999777777889999999999999998 677778888899999999998863
No 79
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.90 E-value=6.7e-27 Score=253.89 Aligned_cols=374 Identities=16% Similarity=0.130 Sum_probs=208.3
Q ss_pred cccCCCCCcEEeeCCCCCCee--cCCcc------------cCCCCCCCEEEcccCcCcccCCcCCC-CCCCCCEEeccCC
Q 007553 14 NFTCFPNLVTFRIWGTRFLSG--RIPSE------------TGALSRLKVLDLSYNRLTGTIPSEIG-SLRDLLELNLSYN 78 (599)
Q Consensus 14 ~l~~l~~L~~L~l~~~~~~~~--~~~~~------------~~~~~~L~~L~l~~n~~~~~~~~~~~-~l~~L~~L~L~~n 78 (599)
.+.++++|++|++.++..+.+ ..|.. ...+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 356777777777776322221 11211 23466777777777777655554443 4677777777777
Q ss_pred -ccccc-CCccCCCCCCCcEEEeecCcCCccCCccc----cCCCcCCEEeeeccc--cccc-CCccccCCCcccEEeccc
Q 007553 79 -ILNGS-IPLEFGNLKDLYDLRLQGNKLDGLIPSSI----GNLTNLTHLDLSLNQ--LSGR-LPQEVGNLKNLVSLFLDN 149 (599)
Q Consensus 79 -~~~~~-~p~~~~~l~~L~~L~L~~n~~~~~~~~~~----~~l~~L~~L~l~~n~--i~~~-~~~~l~~l~~L~~L~l~~ 149 (599)
.++.. ++..+.++++|++|+|++|.+.+..+..+ ..+++|++|++++|. +... ++..+.++++|++|++++
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~ 220 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNR 220 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCT
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCC
Confidence 44322 23333467777777777776654333223 245677777777765 2111 111223457777777776
Q ss_pred CccCCCCcccccCCCCCCeeeccccc--------------------------cc----ccCccccCCCCCCCEEEccCCc
Q 007553 150 NNLTGPIPSTLYHLNQLSTLYLAYNN--------------------------LV----GPLPKEVGNLKNLDSLLLNRNN 199 (599)
Q Consensus 150 n~i~~~~~~~l~~l~~L~~L~l~~n~--------------------------~~----~~~~~~l~~l~~L~~L~l~~n~ 199 (599)
|.....++..+..+++|++|+++.+. +. ..++..+..+++|++|++++|.
T Consensus 221 ~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~ 300 (594)
T 2p1m_B 221 AVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYAT 300 (594)
T ss_dssp TSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCC
T ss_pred CCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCC
Confidence 62212244445555566666543321 11 1122223356788888888887
Q ss_pred ccccC-chhccCCCCCCEEeCCCCcCccc-CcccCCCCCCCCEEEccC---------CcCCCCCCccc-CCCCCCCEEec
Q 007553 200 LTGPI-PSTIGFLNLLDELRLSHNRLDGP-IPPTIGNLTYLTSLDLSS---------NQLSGLLPREV-GNLKYLDSLSL 267 (599)
Q Consensus 200 ~~~~~-~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~---------n~l~~~~~~~l-~~l~~L~~L~L 267 (599)
+++.. ...+..+++|+.|++++| +... ++.....+++|++|+++. +.+++.....+ ..+++|+.|.+
T Consensus 301 l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~ 379 (594)
T 2p1m_B 301 VQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLY 379 (594)
T ss_dssp CCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEE
T ss_pred CCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHH
Confidence 65432 223557788888888877 3322 222223477788887743 33332222222 23677788877
Q ss_pred cCcceeecCCcCcc-CCCCCCEEECC--C----CCCccCC-----CccCcCCCCCCEEEcccCcCccCCCccccC-CCCC
Q 007553 268 DRNNLIGPIPPTIG-YLTNLTSLNLG--Y----NQLNSSI-----PPELMNCSQLQNLAVNHNSLSGSIPSEIGN-LIHL 334 (599)
Q Consensus 268 ~~n~l~~~~~~~~~-~~~~L~~L~ls--~----n~~~~~~-----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L 334 (599)
..|.+++.....+. .+++|+.|+++ + +.+++.. +..+..+++|+.|++++ .+++.....+.. +++|
T Consensus 380 ~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L 458 (594)
T 2p1m_B 380 FCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKM 458 (594)
T ss_dssp EESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTC
T ss_pred hcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhc
Confidence 77777654433333 46778888877 3 3443211 11145567778888766 555443334433 6778
Q ss_pred CEEeCCCccccccCCccc-CCCCCCCEEECCCCcCcccCCc----cCCCCCeeecccCcc
Q 007553 335 RQLDLSHNFINGTIPSQL-GKIPNVSEVDVSKNNLSGVIPK----SVFRVPGLKWSENNL 389 (599)
Q Consensus 335 ~~L~l~~n~l~~~~~~~~-~~~~~L~~L~ls~n~l~~~~~~----~~~~~~~l~~~~n~~ 389 (599)
+.|++++|.+++..+..+ ..+++|+.|++++|.+++.... .+..++.+++++|++
T Consensus 459 ~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 459 EMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred cEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 888887777765444333 4567778888887777543222 234456677776655
No 80
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.90 E-value=1.1e-26 Score=252.15 Aligned_cols=351 Identities=15% Similarity=0.108 Sum_probs=201.7
Q ss_pred cCCCCCcEEeeCCCCCCeecCCcccC-CCCCCCEEEcccC-cCccc-CCcCCCCCCCCCEEeccCCcccccCCccC----
Q 007553 16 TCFPNLVTFRIWGTRFLSGRIPSETG-ALSRLKVLDLSYN-RLTGT-IPSEIGSLRDLLELNLSYNILNGSIPLEF---- 88 (599)
Q Consensus 16 ~~l~~L~~L~l~~~~~~~~~~~~~~~-~~~~L~~L~l~~n-~~~~~-~~~~~~~l~~L~~L~L~~n~~~~~~p~~~---- 88 (599)
..+++|++|++++ +.+++..+..+. .+++|++|++++| .+++. ++..+..+++|++|+|++|.+++..+..+
T Consensus 102 ~~~~~L~~L~L~~-~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~ 180 (594)
T 2p1m_B 102 SSYTWLEEIRLKR-MVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 (594)
T ss_dssp HHCTTCCEEEEES-CBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSC
T ss_pred HhCCCCCeEEeeC-cEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHh
Confidence 3567777888877 666666555554 5777788888777 44422 33333467778888888777665443333
Q ss_pred CCCCCCcEEEeecCc--CCcc-CCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCc--------------
Q 007553 89 GNLKDLYDLRLQGNK--LDGL-IPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNN-------------- 151 (599)
Q Consensus 89 ~~l~~L~~L~L~~n~--~~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~-------------- 151 (599)
..+++|++|++++|. +... ++..+..+++|++|++++|.....++..+..+++|++|+++.+.
T Consensus 181 ~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~ 260 (594)
T 2p1m_B 181 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVA 260 (594)
T ss_dssp TTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHH
T ss_pred hcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHH
Confidence 256677888877775 2211 11122345777888877773222255556667777777654431
Q ss_pred ------------cCC----CCcccccCCCCCCeeecccccccccC-ccccCCCCCCCEEEccCCcccc-cCchhccCCCC
Q 007553 152 ------------LTG----PIPSTLYHLNQLSTLYLAYNNLVGPL-PKEVGNLKNLDSLLLNRNNLTG-PIPSTIGFLNL 213 (599)
Q Consensus 152 ------------i~~----~~~~~l~~l~~L~~L~l~~n~~~~~~-~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~ 213 (599)
+.. .++..+..+++|++|++++|.+.+.. ...+..+++|++|++++| +.. .++.....+++
T Consensus 261 l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 261 LSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp HHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred HhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 111 12222234567777777777754322 222456777788877776 322 22222334677
Q ss_pred CCEEeCCC---------CcCcccCcccC-CCCCCCCEEEccCCcCCCCCCcccC-CCCCCCEEecc--C----cceeec-
Q 007553 214 LDELRLSH---------NRLDGPIPPTI-GNLTYLTSLDLSSNQLSGLLPREVG-NLKYLDSLSLD--R----NNLIGP- 275 (599)
Q Consensus 214 L~~L~l~~---------n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~l~-~l~~L~~L~L~--~----n~l~~~- 275 (599)
|+.|++.+ +.+++.....+ ..+++|++|.+..|.+++..+..+. .+++|+.|+++ + +.+++.
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 77777733 33332211122 2367777777777777654444443 46777777777 2 333311
Q ss_pred ----CCcCccCCCCCCEEECCCCCCccCCCccCcC-CCCCCEEEcccCcCccCCCccc-cCCCCCCEEeCCCccccccCC
Q 007553 276 ----IPPTIGYLTNLTSLNLGYNQLNSSIPPELMN-CSQLQNLAVNHNSLSGSIPSEI-GNLIHLRQLDLSHNFINGTIP 349 (599)
Q Consensus 276 ----~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~ 349 (599)
++..+..+++|+.|++++ .+++..+..+.. +++|+.|++++|.+++.....+ ..+++|+.|++++|.+++...
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~ 498 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKAL 498 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHH
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHH
Confidence 111244567777887766 454433333333 6777788887777765433333 456777888887777754333
Q ss_pred c-ccCCCCCCCEEECCCCcCc
Q 007553 350 S-QLGKIPNVSEVDVSKNNLS 369 (599)
Q Consensus 350 ~-~~~~~~~L~~L~ls~n~l~ 369 (599)
. ....+++|+.|++++|+++
T Consensus 499 ~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 499 LANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp HHTGGGGGGSSEEEEESSCCB
T ss_pred HHHHHhCCCCCEEeeeCCCCC
Confidence 2 3344677777888777764
No 81
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=7.2e-23 Score=194.65 Aligned_cols=196 Identities=22% Similarity=0.220 Sum_probs=99.5
Q ss_pred CCCEEeccCCcccccCCccCCCCCCCcEEEeecCc-CCccCCccccCCCcCCEEeeec-ccccccCCccccCCCcccEEe
Q 007553 69 DLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNK-LDGLIPSSIGNLTNLTHLDLSL-NQLSGRLPQEVGNLKNLVSLF 146 (599)
Q Consensus 69 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~-~~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~l~~l~~L~~L~ 146 (599)
+|++|++++|++++..+..|.++++|++|++++|+ +....+..|.++++|++|++++ |.++...+..+.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 44444444444443333344444444444444443 4333333444444444444444 444443334444444444444
Q ss_pred cccCccCCCCcccccCCCCCC---eeecccc-cccccCccccCCCCCCC-EEEccCCcccccCchhccCCCCCCEEeCCC
Q 007553 147 LDNNNLTGPIPSTLYHLNQLS---TLYLAYN-NLVGPLPKEVGNLKNLD-SLLLNRNNLTGPIPSTIGFLNLLDELRLSH 221 (599)
Q Consensus 147 l~~n~i~~~~~~~l~~l~~L~---~L~l~~n-~~~~~~~~~l~~l~~L~-~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 221 (599)
+++|.+++ +|. |..+++|+ +|++++| .+.+..+..|..+++|+ +|++++|.++...+..+.. ++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 44444443 232 44444444 5555555 45444444455555555 6666555555222222333 5666666666
Q ss_pred Cc-CcccCcccCCCC-CCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCc
Q 007553 222 NR-LDGPIPPTIGNL-TYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRN 270 (599)
Q Consensus 222 n~-l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n 270 (599)
|. +++..+..|..+ ++|++|++++|.+++ +|.. .+++|+.|++.++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 63 665555566666 777777777777764 3332 4566777777654
No 82
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=7.2e-23 Score=194.67 Aligned_cols=204 Identities=21% Similarity=0.226 Sum_probs=169.4
Q ss_pred cCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCc-ccccCCccCCCCCCCcEEEeec-CcCCccCCccc
Q 007553 35 RIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNI-LNGSIPLEFGNLKDLYDLRLQG-NKLDGLIPSSI 112 (599)
Q Consensus 35 ~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~-~~~~~p~~~~~l~~L~~L~L~~-n~~~~~~~~~~ 112 (599)
.+|. +. ++|++|++++|.+++..+..|.++++|++|++++|. ++...+..|.++++|++|++++ |++....+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 5665 42 489999999999997777789999999999999997 8877777899999999999998 89987777888
Q ss_pred cCCCcCCEEeeecccccccCCccccCCCccc---EEecccC-ccCCCCcccccCCCCCC-eeecccccccccCccccCCC
Q 007553 113 GNLTNLTHLDLSLNQLSGRLPQEVGNLKNLV---SLFLDNN-NLTGPIPSTLYHLNQLS-TLYLAYNNLVGPLPKEVGNL 187 (599)
Q Consensus 113 ~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~---~L~l~~n-~i~~~~~~~l~~l~~L~-~L~l~~n~~~~~~~~~l~~l 187 (599)
.++++|++|++++|.+++ +|+ +..+++|+ +|++++| .+++..+..|..+++|+ +|++++|.+....+..+..
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~- 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG- 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-
Confidence 999999999999999986 565 88888888 9999999 88877667789999999 9999999988544444544
Q ss_pred CCCCEEEccCCc-ccccCchhccCC-CCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCc
Q 007553 188 KNLDSLLLNRNN-LTGPIPSTIGFL-NLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQ 247 (599)
Q Consensus 188 ~~L~~L~l~~n~-~~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 247 (599)
++|++|++++|. +++..+..+..+ +.|+.|++++|.+++. |.. .+++|+.|+++++.
T Consensus 179 ~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNTW 237 (239)
T ss_dssp CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC-
T ss_pred CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCcc
Confidence 899999999995 886667778888 9999999999999844 433 67889999988763
No 83
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=3e-23 Score=205.47 Aligned_cols=226 Identities=22% Similarity=0.218 Sum_probs=182.5
Q ss_pred CCCCEEEcccCcCcccCCc---CCCCCCCCCEEeccCCcccccCCccC--CCCCCCcEEEeecCcCCccCC----ccccC
Q 007553 44 SRLKVLDLSYNRLTGTIPS---EIGSLRDLLELNLSYNILNGSIPLEF--GNLKDLYDLRLQGNKLDGLIP----SSIGN 114 (599)
Q Consensus 44 ~~L~~L~l~~n~~~~~~~~---~~~~l~~L~~L~L~~n~~~~~~p~~~--~~l~~L~~L~L~~n~~~~~~~----~~~~~ 114 (599)
..++.|.+.++.++...-. .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|++.+..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578889988877532111 12235679999999999998888888 899999999999999987544 44567
Q ss_pred CCcCCEEeeecccccccCCccccCCCcccEEecccCccCCC--C--cccccCCCCCCeeecccccccccC--cc-ccCCC
Q 007553 115 LTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGP--I--PSTLYHLNQLSTLYLAYNNLVGPL--PK-EVGNL 187 (599)
Q Consensus 115 l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~--~--~~~l~~l~~L~~L~l~~n~~~~~~--~~-~l~~l 187 (599)
+++|++|++++|.+.+..+..+.++++|++|++++|++.+. + +..+..+++|++|++++|.++... +. .+..+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 89999999999999988888999999999999999997642 2 223468899999999999986321 11 24678
Q ss_pred CCCCEEEccCCcccccCchhccCC---CCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCE
Q 007553 188 KNLDSLLLNRNNLTGPIPSTIGFL---NLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDS 264 (599)
Q Consensus 188 ~~L~~L~l~~n~~~~~~~~~~~~l---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 264 (599)
++|++|++++|.+.+..|..+..+ ++|+.|++++|.++ .+|..+. ++|++|++++|.+++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999998877777666 69999999999999 6676664 8999999999999964 43 678899999
Q ss_pred EeccCcceee
Q 007553 265 LSLDRNNLIG 274 (599)
Q Consensus 265 L~L~~n~l~~ 274 (599)
|+|++|.++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999998864
No 84
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.1e-24 Score=220.78 Aligned_cols=250 Identities=21% Similarity=0.177 Sum_probs=115.5
Q ss_pred CCCeecCCcccCCCCCCCEEEcccCcCcccCC----cCCCCCC-CCCEEeccCCcccccCCccCCCC-----CCCcEEEe
Q 007553 30 RFLSGRIPSETGALSRLKVLDLSYNRLTGTIP----SEIGSLR-DLLELNLSYNILNGSIPLEFGNL-----KDLYDLRL 99 (599)
Q Consensus 30 ~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~----~~~~~l~-~L~~L~L~~n~~~~~~p~~~~~l-----~~L~~L~L 99 (599)
+.+++.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..|..+ ++|++|+|
T Consensus 8 n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~L 87 (362)
T 3goz_A 8 HPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNL 87 (362)
T ss_dssp CTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEEC
T ss_pred ccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEEC
Confidence 44444444444444445555555555543333 3344444 45555555555544434333332 44555555
Q ss_pred ecCcCCccCCccccCCCcCCEEeeecccccccCCccccCC-CcccEEecccCccCCCCccc----ccC-CCCCCeeeccc
Q 007553 100 QGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNL-KNLVSLFLDNNNLTGPIPST----LYH-LNQLSTLYLAY 173 (599)
Q Consensus 100 ~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l-~~L~~L~l~~n~i~~~~~~~----l~~-l~~L~~L~l~~ 173 (599)
++|++.+..+..+... +..+ ++|++|++++|.+++..+.. +.. .++|++|+|++
T Consensus 88 s~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~ 147 (362)
T 3goz_A 88 SGNFLSYKSSDELVKT--------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRG 147 (362)
T ss_dssp CSSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTT
T ss_pred cCCcCChHHHHHHHHH--------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccC
Confidence 5555443333322211 2222 44444444444444333222 222 13455555555
Q ss_pred ccccccC----ccccCCCC-CCCEEEccCCcccccCchh----ccCC-CCCCEEeCCCCcCccc----CcccCCC-CCCC
Q 007553 174 NNLVGPL----PKEVGNLK-NLDSLLLNRNNLTGPIPST----IGFL-NLLDELRLSHNRLDGP----IPPTIGN-LTYL 238 (599)
Q Consensus 174 n~~~~~~----~~~l~~l~-~L~~L~l~~n~~~~~~~~~----~~~l-~~L~~L~l~~n~l~~~----~~~~~~~-l~~L 238 (599)
|.+.+.. +..+..++ +|++|++++|.+++..+.. +... ++|+.|++++|.+.+. ++..+.. .++|
T Consensus 148 N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L 227 (362)
T 3goz_A 148 NDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHV 227 (362)
T ss_dssp SCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTC
T ss_pred CcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCc
Confidence 5444322 12223333 5555555555554433322 2222 3555555555555532 2223333 2366
Q ss_pred CEEEccCCcCCCCCC----cccCCCCCCCEEeccCcceee-------cCCcCccCCCCCCEEECCCCCCccC
Q 007553 239 TSLDLSSNQLSGLLP----REVGNLKYLDSLSLDRNNLIG-------PIPPTIGYLTNLTSLNLGYNQLNSS 299 (599)
Q Consensus 239 ~~L~l~~n~l~~~~~----~~l~~l~~L~~L~L~~n~l~~-------~~~~~~~~~~~L~~L~ls~n~~~~~ 299 (599)
++|++++|.+++..+ ..+..+++|+.|+|++|.+.+ .++..+..+++|+.|++++|.+.+.
T Consensus 228 ~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 228 VSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred eEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 666666666654322 223455666666666665322 1233455566677777777776554
No 85
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=5.2e-25 Score=225.41 Aligned_cols=245 Identities=20% Similarity=0.210 Sum_probs=131.5
Q ss_pred CCcccCCCCCCCEEEcccCcCccc----CCcCCCCCCCCCEEeccCCc---ccccCCccC-------CCCCCCcEEEeec
Q 007553 36 IPSETGALSRLKVLDLSYNRLTGT----IPSEIGSLRDLLELNLSYNI---LNGSIPLEF-------GNLKDLYDLRLQG 101 (599)
Q Consensus 36 ~~~~~~~~~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~L~~n~---~~~~~p~~~-------~~l~~L~~L~L~~ 101 (599)
++..+..+++|++|+|++|.+++. ++..+..+++|++|+|++|. +++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 444555566666666666666543 22335556666666666642 233333332 4555566666666
Q ss_pred CcCCc----cCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCC---------CCCCe
Q 007553 102 NKLDG----LIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHL---------NQLST 168 (599)
Q Consensus 102 n~~~~----~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l---------~~L~~ 168 (599)
|.+.. .+|..+..+++|++|++++|.+....+..+.. .+..+ ++|++
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------~l~~l~~~~~~~~~~~L~~ 163 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--------------------ALQELAVNKKAKNAPPLRS 163 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--------------------HHHHHHHHHHHHTCCCCCE
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH--------------------HHHHHhhhhhcccCCCCcE
Confidence 65554 23444555555555555555554322222211 11111 44555
Q ss_pred eeccccccc-ccCc---cccCCCCCCCEEEccCCcccc-----cCchhccCCCCCCEEeCCCCcCc----ccCcccCCCC
Q 007553 169 LYLAYNNLV-GPLP---KEVGNLKNLDSLLLNRNNLTG-----PIPSTIGFLNLLDELRLSHNRLD----GPIPPTIGNL 235 (599)
Q Consensus 169 L~l~~n~~~-~~~~---~~l~~l~~L~~L~l~~n~~~~-----~~~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~l 235 (599)
|++++|.+. ..++ ..+..+++|++|++++|.+.. ..+..+..+++|+.|+|++|.++ ..++..+..+
T Consensus 164 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~ 243 (386)
T 2ca6_A 164 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 243 (386)
T ss_dssp EECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred EECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccC
Confidence 555555443 1122 234445555555555555541 12224555566666666666654 3445556666
Q ss_pred CCCCEEEccCCcCCCC----CCccc--CCCCCCCEEeccCcceee----cCCcCc-cCCCCCCEEECCCCCCccCC
Q 007553 236 TYLTSLDLSSNQLSGL----LPREV--GNLKYLDSLSLDRNNLIG----PIPPTI-GYLTNLTSLNLGYNQLNSSI 300 (599)
Q Consensus 236 ~~L~~L~l~~n~l~~~----~~~~l--~~l~~L~~L~L~~n~l~~----~~~~~~-~~~~~L~~L~ls~n~~~~~~ 300 (599)
++|++|++++|.+++. ++..+ ..+++|+.|+|++|.+++ .+|..+ ..+++|++|++++|.+++..
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 6666666666666543 34444 236777777777777765 355555 44677888888888777554
No 86
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=7.7e-23 Score=202.48 Aligned_cols=226 Identities=20% Similarity=0.183 Sum_probs=185.5
Q ss_pred CCCCEEeccCCcccccCCc---cCCCCCCCcEEEeecCcCCccCCccc--cCCCcCCEEeeecccccccCC----ccccC
Q 007553 68 RDLLELNLSYNILNGSIPL---EFGNLKDLYDLRLQGNKLDGLIPSSI--GNLTNLTHLDLSLNQLSGRLP----QEVGN 138 (599)
Q Consensus 68 ~~L~~L~L~~n~~~~~~p~---~~~~l~~L~~L~L~~n~~~~~~~~~~--~~l~~L~~L~l~~n~i~~~~~----~~l~~ 138 (599)
..++.|.+.++.++...-. .+..+++|++|++++|.+.+..|..+ ..+++|++|++++|.+.+..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578899998877532111 12245779999999999998888888 899999999999999987555 34567
Q ss_pred CCcccEEecccCccCCCCcccccCCCCCCeeeccccccccc--C--ccccCCCCCCCEEEccCCcccccC--ch-hccCC
Q 007553 139 LKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGP--L--PKEVGNLKNLDSLLLNRNNLTGPI--PS-TIGFL 211 (599)
Q Consensus 139 l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~--~--~~~l~~l~~L~~L~l~~n~~~~~~--~~-~~~~l 211 (599)
+++|++|++++|.+.+..+..|..+++|++|++++|++.+. + +..+..+++|++|++++|.++... +. .+..+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 99999999999999988888999999999999999997642 1 233478899999999999997321 11 35778
Q ss_pred CCCCEEeCCCCcCcccCcccCCCC---CCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCE
Q 007553 212 NLLDELRLSHNRLDGPIPPTIGNL---TYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTS 288 (599)
Q Consensus 212 ~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~ 288 (599)
+.|+.|++++|.+.+..|..+..+ ++|++|++++|.++ .+|..+. ++|+.|+|++|.+++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999998878777776 79999999999999 5677664 7999999999999864 33 677899999
Q ss_pred EECCCCCCcc
Q 007553 289 LNLGYNQLNS 298 (599)
Q Consensus 289 L~ls~n~~~~ 298 (599)
|++++|.+++
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999874
No 87
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1e-24 Score=218.86 Aligned_cols=197 Identities=19% Similarity=0.251 Sum_probs=92.7
Q ss_pred CCEEEcccCcCcccCCcCCCCC--CCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCcc-CCccccCCCcCCEEe
Q 007553 46 LKVLDLSYNRLTGTIPSEIGSL--RDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGL-IPSSIGNLTNLTHLD 122 (599)
Q Consensus 46 L~~L~l~~n~~~~~~~~~~~~l--~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~-~~~~~~~l~~L~~L~ 122 (599)
++.++++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|++++|.+.+. ++..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 455555555544 2233333 5555555555555544333 33455555555555555433 444455555555555
Q ss_pred eecccccccCCccccCCCcccEEecccC-ccCCC-CcccccCCCCCCeeecccc-ccccc-CccccCCCC-CCCEEEccC
Q 007553 123 LSLNQLSGRLPQEVGNLKNLVSLFLDNN-NLTGP-IPSTLYHLNQLSTLYLAYN-NLVGP-LPKEVGNLK-NLDSLLLNR 197 (599)
Q Consensus 123 l~~n~i~~~~~~~l~~l~~L~~L~l~~n-~i~~~-~~~~l~~l~~L~~L~l~~n-~~~~~-~~~~l~~l~-~L~~L~l~~ 197 (599)
+++|.+++..+..+..+++|++|++++| .+++. ++..+..+++|++|++++| .+.+. ++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 5555555444444555555555555555 34321 3333444555555555555 44332 233344444 555555555
Q ss_pred C--ccc-ccCchhccCCCCCCEEeCCCCc-CcccCcccCCCCCCCCEEEccCC
Q 007553 198 N--NLT-GPIPSTIGFLNLLDELRLSHNR-LDGPIPPTIGNLTYLTSLDLSSN 246 (599)
Q Consensus 198 n--~~~-~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n 246 (599)
| .++ +.++..+..+++|+.|++++|. +++..+..+..+++|++|++++|
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 4 222 2233333444444444444444 33333334444444444444444
No 88
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1e-24 Score=219.01 Aligned_cols=253 Identities=22% Similarity=0.217 Sum_probs=199.7
Q ss_pred CCcEEeeCCCCCCeecCCcccCCC--CCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCccccc-CCccCCCCCCCcE
Q 007553 20 NLVTFRIWGTRFLSGRIPSETGAL--SRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGS-IPLEFGNLKDLYD 96 (599)
Q Consensus 20 ~L~~L~l~~~~~~~~~~~~~~~~~--~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~l~~L~~ 96 (599)
.++++++++ +.+. +..+..+ +++++|++++|.+.+..+. +..+++|++|++++|.+++. +|..+..+++|++
T Consensus 48 ~~~~l~l~~-~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTG-KNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTT-CBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeecccc-ccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 478999998 6665 3445566 8999999999999976665 56799999999999998865 7778899999999
Q ss_pred EEeecCcCCccCCccccCCCcCCEEeeecc-ccccc-CCccccCCCcccEEecccC-ccCCC-CcccccCCC-CCCeeec
Q 007553 97 LRLQGNKLDGLIPSSIGNLTNLTHLDLSLN-QLSGR-LPQEVGNLKNLVSLFLDNN-NLTGP-IPSTLYHLN-QLSTLYL 171 (599)
Q Consensus 97 L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n-~i~~~-~~~~l~~l~~L~~L~l~~n-~i~~~-~~~~l~~l~-~L~~L~l 171 (599)
|++++|.+.+..+..++.+++|++|++++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +|++|++
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 999999998778888999999999999999 67753 5666889999999999999 88864 566788899 9999999
Q ss_pred cccc--cc-ccCccccCCCCCCCEEEccCCc-ccccCchhccCCCCCCEEeCCCCc-CcccCcccCCCCCCCCEEEccCC
Q 007553 172 AYNN--LV-GPLPKEVGNLKNLDSLLLNRNN-LTGPIPSTIGFLNLLDELRLSHNR-LDGPIPPTIGNLTYLTSLDLSSN 246 (599)
Q Consensus 172 ~~n~--~~-~~~~~~l~~l~~L~~L~l~~n~-~~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n 246 (599)
++|. ++ +.++..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|++|++++|
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 9994 44 3456677889999999999999 776777788999999999999995 33222235777888888888887
Q ss_pred cCCCCCCcccCCC-CCCCEEeccCcceeecCCcCcc
Q 007553 247 QLSGLLPREVGNL-KYLDSLSLDRNNLIGPIPPTIG 281 (599)
Q Consensus 247 ~l~~~~~~~l~~l-~~L~~L~L~~n~l~~~~~~~~~ 281 (599)
++.. .+..+ ..+..|++++|.+++..|..++
T Consensus 283 -i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 283 -VPDG---TLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp -SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred -cCHH---HHHHHHhhCcceEEecccCccccCCccc
Confidence 4322 22222 2245555666666666655543
No 89
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.1e-24 Score=220.72 Aligned_cols=196 Identities=22% Similarity=0.142 Sum_probs=132.0
Q ss_pred cccccccccccCCCCCcEEeeCCCCCCeecCC----cccCCCC-CCCEEEcccCcCcccCCcCCCCC-----CCCCEEec
Q 007553 6 NAAELSQLNFTCFPNLVTFRIWGTRFLSGRIP----SETGALS-RLKVLDLSYNRLTGTIPSEIGSL-----RDLLELNL 75 (599)
Q Consensus 6 ~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~----~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~l-----~~L~~L~L 75 (599)
++......-+...++|++|++++ |.+.+..+ +.+..++ +|++|+|++|.+++..+..+..+ ++|++|+|
T Consensus 9 ~~~~~~~~~~~~~~~L~~L~Ls~-n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~L 87 (362)
T 3goz_A 9 PGSNPVEEFTSIPHGVTSLDLSL-NNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNL 87 (362)
T ss_dssp TTCCHHHHHHTSCTTCCEEECTT-SCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEEC
T ss_pred cchHHHHHHHhCCCCceEEEccC-CCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEEC
Confidence 33433333345556699999999 88887666 6778888 99999999999997777766664 99999999
Q ss_pred cCCcccccCCccCC----CC-CCCcEEEeecCcCCccCCcccc----C-CCcCCEEeeecccccccCC----ccccCCC-
Q 007553 76 SYNILNGSIPLEFG----NL-KDLYDLRLQGNKLDGLIPSSIG----N-LTNLTHLDLSLNQLSGRLP----QEVGNLK- 140 (599)
Q Consensus 76 ~~n~~~~~~p~~~~----~l-~~L~~L~L~~n~~~~~~~~~~~----~-l~~L~~L~l~~n~i~~~~~----~~l~~l~- 140 (599)
++|.+++..+..+. .+ ++|++|+|++|++.+..+..+. . .++|++|++++|.+++..+ ..+..++
T Consensus 88 s~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 167 (362)
T 3goz_A 88 SGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPA 167 (362)
T ss_dssp CSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCT
T ss_pred cCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCc
Confidence 99999976666444 44 8999999999999866554443 3 2588888888888875433 3334444
Q ss_pred cccEEecccCccCCCCccc----ccCC-CCCCeeeccccccccc----CccccCC-CCCCCEEEccCCcccc
Q 007553 141 NLVSLFLDNNNLTGPIPST----LYHL-NQLSTLYLAYNNLVGP----LPKEVGN-LKNLDSLLLNRNNLTG 202 (599)
Q Consensus 141 ~L~~L~l~~n~i~~~~~~~----l~~l-~~L~~L~l~~n~~~~~----~~~~l~~-l~~L~~L~l~~n~~~~ 202 (599)
+|++|++++|.+++..+.. +..+ ++|++|+|++|.+.+. ++..+.. .++|++|++++|.+++
T Consensus 168 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 168 NVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred cccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 7777777777776554432 3333 3666666666666542 2223322 2355555555555543
No 90
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.4e-25 Score=227.90 Aligned_cols=250 Identities=21% Similarity=0.230 Sum_probs=176.5
Q ss_pred cCCcCCCCCCCCCEEeccCCcccccCC----ccCCCCCCCcEEEeecCcCC---ccCCccccCCCcCCEEeeeccccccc
Q 007553 59 TIPSEIGSLRDLLELNLSYNILNGSIP----LEFGNLKDLYDLRLQGNKLD---GLIPSSIGNLTNLTHLDLSLNQLSGR 131 (599)
Q Consensus 59 ~~~~~~~~l~~L~~L~L~~n~~~~~~p----~~~~~l~~L~~L~L~~n~~~---~~~~~~~~~l~~L~~L~l~~n~i~~~ 131 (599)
.++..+..+++|++|+|++|.++...+ ..|..+++|++|+|++|.+. +.+|..+. .
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~-----------------~ 85 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALR-----------------L 85 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH-----------------H
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHH-----------------H
Confidence 344555666777777777777765432 23556667777777665432 22333221 0
Q ss_pred CCccccCCCcccEEecccCccCC----CCcccccCCCCCCeeecccccccccCc----cccCCC---------CCCCEEE
Q 007553 132 LPQEVGNLKNLVSLFLDNNNLTG----PIPSTLYHLNQLSTLYLAYNNLVGPLP----KEVGNL---------KNLDSLL 194 (599)
Q Consensus 132 ~~~~l~~l~~L~~L~l~~n~i~~----~~~~~l~~l~~L~~L~l~~n~~~~~~~----~~l~~l---------~~L~~L~ 194 (599)
+...+..+++|++|++++|.++. .++..+..+++|++|+|++|.+....+ ..+..+ ++|++|+
T Consensus 86 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~ 165 (386)
T 2ca6_A 86 LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSII 165 (386)
T ss_dssp HHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEE
T ss_pred HHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEE
Confidence 11223555666666666666655 245556666677777777776653322 223333 8999999
Q ss_pred ccCCccc-ccCc---hhccCCCCCCEEeCCCCcCcc-----cCcccCCCCCCCCEEEccCCcCC----CCCCcccCCCCC
Q 007553 195 LNRNNLT-GPIP---STIGFLNLLDELRLSHNRLDG-----PIPPTIGNLTYLTSLDLSSNQLS----GLLPREVGNLKY 261 (599)
Q Consensus 195 l~~n~~~-~~~~---~~~~~l~~L~~L~l~~n~l~~-----~~~~~~~~l~~L~~L~l~~n~l~----~~~~~~l~~l~~ 261 (599)
+++|.++ ...+ ..+..++.|+.|++++|.+.. ..+..+..+++|++|+|++|.++ +.+|..+..+++
T Consensus 166 L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~ 245 (386)
T 2ca6_A 166 CGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 245 (386)
T ss_dssp CCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCC
Confidence 9999997 3444 467788999999999999983 23447889999999999999996 457788899999
Q ss_pred CCEEeccCcceeec----CCcCc--cCCCCCCEEECCCCCCcc----CCCccC-cCCCCCCEEEcccCcCccCCC
Q 007553 262 LDSLSLDRNNLIGP----IPPTI--GYLTNLTSLNLGYNQLNS----SIPPEL-MNCSQLQNLAVNHNSLSGSIP 325 (599)
Q Consensus 262 L~~L~L~~n~l~~~----~~~~~--~~~~~L~~L~ls~n~~~~----~~~~~~-~~l~~L~~L~l~~n~l~~~~~ 325 (599)
|+.|+|++|.+++. ++..+ ..+++|++|+|++|.+++ .+|..+ ..+++|+.|++++|.+++..+
T Consensus 246 L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 246 LRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred cCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99999999999865 45555 348999999999999987 366666 568999999999999997653
No 91
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=8.2e-22 Score=188.75 Aligned_cols=178 Identities=28% Similarity=0.282 Sum_probs=100.8
Q ss_pred CCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEe
Q 007553 20 NLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRL 99 (599)
Q Consensus 20 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L 99 (599)
..+++++.+ +.++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 15 ~~~~l~~~~-~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 15 GKKEVDCQG-KSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGTEEECTT-CCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCeEEecCC-CCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 445566655 4444 4444432 45666666666666555555666666666666666666555555566666666666
Q ss_pred ecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccccccccc
Q 007553 100 QGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGP 179 (599)
Q Consensus 100 ~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~ 179 (599)
++|++.+..+..|..+++|++|++++|.+++..+..+.++++|++|++++|.+++..+..|..+++|++|+|++|.+.+.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 66666555445555566666666666666544444455556666666666655544444455555555555555555554
Q ss_pred CccccCCCCCCCEEEccCCccc
Q 007553 180 LPKEVGNLKNLDSLLLNRNNLT 201 (599)
Q Consensus 180 ~~~~l~~l~~L~~L~l~~n~~~ 201 (599)
.+..+..+++|++|++++|.+.
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBC
T ss_pred CHHHHhCCCCCCEEEeeCCcee
Confidence 4445555555555555555544
No 92
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=7.9e-22 Score=188.86 Aligned_cols=179 Identities=28% Similarity=0.291 Sum_probs=127.1
Q ss_pred CCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEee
Q 007553 44 SRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDL 123 (599)
Q Consensus 44 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l 123 (599)
...++++++++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++.+..+..|..+++|++|++
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 35678888888887 5665553 57888888888888777777888888888888888888777777778888888888
Q ss_pred ecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCccccc
Q 007553 124 SLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGP 203 (599)
Q Consensus 124 ~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~ 203 (599)
++|.++...+..+.++++|++|++++|.+++..+..|..+++|++|+|++|.+.+..+..|..+++|++|++++|.+.+.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 88888766666677777777777777777765555566677777777777766655555566666666666666666554
Q ss_pred CchhccCCCCCCEEeCCCCcCc
Q 007553 204 IPSTIGFLNLLDELRLSHNRLD 225 (599)
Q Consensus 204 ~~~~~~~l~~L~~L~l~~n~l~ 225 (599)
.+..+..+++|+.|++++|.+.
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBC
T ss_pred CHHHHhCCCCCCEEEeeCCcee
Confidence 4445555555555555555554
No 93
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=4.3e-22 Score=196.62 Aligned_cols=191 Identities=26% Similarity=0.395 Sum_probs=86.7
Q ss_pred CCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEe
Q 007553 67 LRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLF 146 (599)
Q Consensus 67 l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~ 146 (599)
+++|++|++++|.++. +| .+..+++|++|++++|++.+..+ +..+++|++|++++|.+.+. ..+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEE
Confidence 3444444444444432 22 23344444444444444432221 44444444444444444321 1244444444444
Q ss_pred cccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcc
Q 007553 147 LDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDG 226 (599)
Q Consensus 147 l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 226 (599)
+++|.+++. + .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+.+
T Consensus 114 l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 444444432 1 14444444444444444443211 4444555555555554443221 4445555555555555543
Q ss_pred cCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCccee
Q 007553 227 PIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLI 273 (599)
Q Consensus 227 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 273 (599)
..+ +..+++|++|++++|.+++.. .+..+++|+.|++++|.++
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred Chh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 322 455556666666666555432 2555566666666666554
No 94
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=5.5e-22 Score=195.85 Aligned_cols=195 Identities=27% Similarity=0.401 Sum_probs=155.1
Q ss_pred cCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCC
Q 007553 40 TGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLT 119 (599)
Q Consensus 40 ~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~ 119 (599)
..++++|++|++++|.++. ++ .+..+++|++|++++|.+++..+ +..+++|++|++++|++.+. ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 3457788888888888873 44 57788888888888888875443 78888888888888888753 3688888888
Q ss_pred EEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCc
Q 007553 120 HLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNN 199 (599)
Q Consensus 120 ~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 199 (599)
+|++++|.+.+. + .+..+++|++|++++|.+++..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 888888888754 3 37888888888888888876533 7788889999998888876433 8888899999999998
Q ss_pred ccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCC
Q 007553 200 LTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSG 250 (599)
Q Consensus 200 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 250 (599)
+++..+ +..+++|+.|++++|.+.+.. .+..+++|+.|++++|.+++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 875443 778889999999999998654 37889999999999999875
No 95
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=3.3e-21 Score=194.11 Aligned_cols=200 Identities=24% Similarity=0.211 Sum_probs=122.4
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCC-ccccCCCcCCE-Eeee
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIP-SSIGNLTNLTH-LDLS 124 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~-~~~~~l~~L~~-L~l~ 124 (599)
+++++++++++ .+|..+ .+++++|+|++|+++...+.+|.++++|++|+|++|++.+.+| ..|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56777777777 566544 3577788888888776555677778888888888887755443 45677777665 4455
Q ss_pred cccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccc-ccccccCccccCCCC-CCCEEEccCCcccc
Q 007553 125 LNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAY-NNLVGPLPKEVGNLK-NLDSLLLNRNNLTG 202 (599)
Q Consensus 125 ~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~-n~~~~~~~~~l~~l~-~L~~L~l~~n~~~~ 202 (599)
.|++....|+.|.++++|++|++++|.+....+..+....++..|++.+ +.+....+..|..+. .++.|++++|.++.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 6777766677777777777777777777765554555555666666654 344443334444443 45666666666653
Q ss_pred cCchhccCCCCCCEEeCCC-CcCcccCcccCCCCCCCCEEEccCCcCCC
Q 007553 203 PIPSTIGFLNLLDELRLSH-NRLDGPIPPTIGNLTYLTSLDLSSNQLSG 250 (599)
Q Consensus 203 ~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 250 (599)
++........|+.|++.+ |.++...+..|..+++|++|++++|.++.
T Consensus 169 -i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~ 216 (350)
T 4ay9_X 169 -IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS 216 (350)
T ss_dssp -ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCC
T ss_pred -CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCc
Confidence 232233344566666653 33332222345556666666666666553
No 96
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.86 E-value=3.7e-22 Score=194.33 Aligned_cols=114 Identities=22% Similarity=0.256 Sum_probs=95.2
Q ss_pred hhccccceecccCCceEEEEEeC------CCCEEEEEEecCCchh-hHHHHHHhhc--cccccC--------CCCCCcce
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS------SGRVVALKKLHRSETE-ELAFLETSST--DFRHYN--------SHTDNDDS 545 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~------~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n--------~~~~~~~l 545 (599)
++|...+.||+|+||+||+|++. +|+.||||+++....+ .++|.+|+++ +++||| .+++.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 35666778999999999999863 4788999999875543 5789999999 999999 56788999
Q ss_pred eecccccc--cccccCCC----------CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN--EHFLSAPE----------NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~----------~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||||++| .++|+.++ ....++|.+++.||.|||+||+||| +++|+|||||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlK 155 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLA 155 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccC
Confidence 99999999 88997432 2356999999999999999999999 7899999997
No 97
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.86 E-value=5.7e-22 Score=195.78 Aligned_cols=114 Identities=19% Similarity=0.251 Sum_probs=96.9
Q ss_pred hhccccceecccCCceEEEEEeC------CCCEEEEEEecCCchh-hHHHHHHhhc--cccccC--------CCCCCcce
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS------SGRVVALKKLHRSETE-ELAFLETSST--DFRHYN--------SHTDNDDS 545 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~------~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n--------~~~~~~~l 545 (599)
++|...+.||+|+||+||+|+++ +++.||||+++..... .++|.+|+++ +++||| .+.+.+++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45666778999999999999874 4789999999765443 5789999998 999999 56788999
Q ss_pred eecccccc--cccccCCC------------CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN--EHFLSAPE------------NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~------------~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||||++| .+|++.+. ...+++|.+++.||.|||+||+||| .++|||||||
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK 185 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLA 185 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeeccccc
Confidence 99999999 88887532 1246999999999999999999999 7899999997
No 98
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.85 E-value=5.9e-22 Score=193.77 Aligned_cols=112 Identities=16% Similarity=0.198 Sum_probs=93.0
Q ss_pred ccccceecccCCceEEEEEeC------CCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------CCCCCccee
Q 007553 485 FHIKYCIGTGGYGSVYRAQLS------SGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------SHTDNDDSS 546 (599)
Q Consensus 485 ~~~~~~lg~g~~g~v~~~~~~------~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~~~~~~~lv 546 (599)
+...+.||+|+||+||+|.+. +++.||||+++..... .++|.+|+.+ +++||| ...+.+++|
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 333566999999999999973 4678999999754332 5689999999 999999 567889999
Q ss_pred ecccccc--cccccCCCC-------------CCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPEN-------------YERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||||++| .+||+.+.. ...++|.++++||.|||+||+||| +.+|||||||
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK 172 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLA 172 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCcc
Confidence 9999999 899965321 246999999999999999999999 7899999997
No 99
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=2.4e-20 Score=187.70 Aligned_cols=240 Identities=18% Similarity=0.131 Sum_probs=159.3
Q ss_pred CEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccC-CccccCCCcccE-Eecc
Q 007553 71 LELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRL-PQEVGNLKNLVS-LFLD 148 (599)
Q Consensus 71 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L~~-L~l~ 148 (599)
++++.++++++ .+|..+ .+++++|+|++|+++.+.+..|.++++|++|++++|.+.+.+ ++.|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 67888888888 567655 367899999999998666677889999999999999886544 456788888775 5566
Q ss_pred cCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccC-CcccccCchhccCCC-CCCEEeCCCCcCcc
Q 007553 149 NNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNR-NNLTGPIPSTIGFLN-LLDELRLSHNRLDG 226 (599)
Q Consensus 149 ~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~-n~~~~~~~~~~~~l~-~L~~L~l~~n~l~~ 226 (599)
+|+++...|..|..+++|++|++++|.+....+..+....++..|++.+ +.+....+..|..+. .++.|++++|.++.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 7888877777888888888888888888766655666666777777755 445544444455443 46777777777763
Q ss_pred cCcccCCCCCCCCEEEccC-CcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCc
Q 007553 227 PIPPTIGNLTYLTSLDLSS-NQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELM 305 (599)
Q Consensus 227 ~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~ 305 (599)
. +.......+|++|++.+ |.++...+..|..+++|+.|+|++|+++. +|.. .+.+|+.|.+.+++-...+| .+.
T Consensus 169 i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~-lp~~--~~~~L~~L~~l~~~~l~~lP-~l~ 243 (350)
T 4ay9_X 169 I-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS-LPSY--GLENLKKLRARSTYNLKKLP-TLE 243 (350)
T ss_dssp E-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCC-CCSS--SCTTCCEEECTTCTTCCCCC-CTT
T ss_pred C-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCc-cChh--hhccchHhhhccCCCcCcCC-Cch
Confidence 3 33333445677777764 44443333456667777777777777663 3321 24455555554443333444 355
Q ss_pred CCCCCCEEEcccC
Q 007553 306 NCSQLQNLAVNHN 318 (599)
Q Consensus 306 ~l~~L~~L~l~~n 318 (599)
.+++|+.+++.++
T Consensus 244 ~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 244 KLVALMEASLTYP 256 (350)
T ss_dssp TCCSCCEEECSCH
T ss_pred hCcChhhCcCCCC
Confidence 5666666666543
No 100
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=9.3e-21 Score=175.89 Aligned_cols=150 Identities=29% Similarity=0.294 Sum_probs=70.6
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecc
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLN 126 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n 126 (599)
+.++++++.++ .+|..+ .++|++|++++|.+++..+..|.++++|++|++++|++.+..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 34444444444 233222 234555555555555443444455555555555555554433334445555555555555
Q ss_pred cccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCc
Q 007553 127 QLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNN 199 (599)
Q Consensus 127 ~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 199 (599)
.+++..+..+.++++|++|++++|.+++..+..|..+++|++|++++|.+.+..+..+..+++|++|++++|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 159 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 159 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCC
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCC
Confidence 5544434444455555555555555544333334444455555555554444333334444444444444443
No 101
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.5e-20 Score=174.42 Aligned_cols=181 Identities=24% Similarity=0.224 Sum_probs=147.9
Q ss_pred cEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeec
Q 007553 22 VTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQG 101 (599)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 101 (599)
+.++..+ +.++ .+|..+ .++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|++++
T Consensus 10 ~~v~c~~-~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYS-QGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCS-SCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecC-CCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 5666665 5544 455444 46899999999999877667788999999999999999876666788999999999999
Q ss_pred CcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCc
Q 007553 102 NKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLP 181 (599)
Q Consensus 102 n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~ 181 (599)
|++.+..+..|..+++|++|++++|.+++..+..+.++++|++|++++|.+++..+..+..+++|++|++++|.+.+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~--- 162 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC--- 162 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC---
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec---
Confidence 99987766778899999999999999987777778899999999999999987766678889999999999996653
Q ss_pred cccCCCCCCCEEEccCCcccccCchhccCCCC
Q 007553 182 KEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNL 213 (599)
Q Consensus 182 ~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~ 213 (599)
.+++|+.|+++.|.+++.+|.+++.++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 4567888888888888888877765544
No 102
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.84 E-value=2.5e-21 Score=188.44 Aligned_cols=110 Identities=22% Similarity=0.304 Sum_probs=92.8
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC-------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN-------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n-------~~~~~~~lv~e~~ 550 (599)
+++...+.||+|+||+||+|++. ..||||.++... ...++|.+|+.+ +++||| ...+.+++|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~ 113 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWC 113 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcC
Confidence 34555677999999999999975 359999987543 224679999998 999999 4567789999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .++|+... ..++|.+++.||.|||+||+||| +.+|||||||
T Consensus 114 ~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlK 159 (307)
T 3omv_A 114 EGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMK 159 (307)
T ss_dssp SSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCC
T ss_pred CCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccC
Confidence 999 88997543 35999999999999999999999 7899999997
No 103
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.84 E-value=3e-21 Score=189.27 Aligned_cols=111 Identities=18% Similarity=0.153 Sum_probs=89.9
Q ss_pred hccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CC----CCCcceeecc
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SH----TDNDDSSDEH 549 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~----~~~~~lv~e~ 549 (599)
++...+.||+|+||+||+|++ +|+.||||++.........+..|+.. +++||| .. ...+++||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 455567899999999999998 58999999997654333344456655 889999 11 1357999999
Q ss_pred cccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCC-----CccccccccC
Q 007553 550 LANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRK-----YRKSYYQRLY 599 (599)
Q Consensus 550 ~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~-----~~~i~Hrdl~ 599 (599)
|++| .++|+.+ .++|.++++|+.|||+||+|||+.+ .++|+|||||
T Consensus 83 ~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlK 135 (303)
T 3hmm_A 83 HEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135 (303)
T ss_dssp CTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCC
T ss_pred CCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCC
Confidence 9999 8899853 3999999999999999999999663 5799999997
No 104
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=1.1e-19 Score=192.38 Aligned_cols=187 Identities=28% Similarity=0.360 Sum_probs=132.5
Q ss_pred CCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeee
Q 007553 45 RLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLS 124 (599)
Q Consensus 45 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~ 124 (599)
+|++|+|++|.+++ +|..+ +++|++|+|++|.++ .+| ..+++|++|+|++|++++ +|. +.. +|++|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 67777777777774 55544 367777777777777 455 346777777777777775 454 544 77777777
Q ss_pred cccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccC
Q 007553 125 LNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPI 204 (599)
Q Consensus 125 ~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~ 204 (599)
+|.+++ +|. .+++|++|++++|.+++ +|. .+++|++|+|++|.+.+ +|. |. ++|+.|++++|.++ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 777775 444 56777778888777775 444 46677888888887776 455 54 77888888888777 44
Q ss_pred chhccCCCCC-------CEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCC
Q 007553 205 PSTIGFLNLL-------DELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNL 259 (599)
Q Consensus 205 ~~~~~~l~~L-------~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l 259 (599)
|. +.. +| +.|++++|.++ .+|..+..+++|+.|++++|.+++..|..+..+
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 54 433 56 88999999888 567777779999999999999988777776553
No 105
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=2.2e-19 Score=190.00 Aligned_cols=187 Identities=26% Similarity=0.328 Sum_probs=154.7
Q ss_pred CCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecc
Q 007553 69 DLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLD 148 (599)
Q Consensus 69 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~ 148 (599)
+|++|+|++|.+++ +|..+ .++|++|+|++|++. .+| ..+++|++|++++|.+++ +|. +.+ +|++|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999986 67655 378999999999998 456 457999999999999996 666 665 99999999
Q ss_pred cCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccC
Q 007553 149 NNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPI 228 (599)
Q Consensus 149 ~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 228 (599)
+|.+++ +|. .+++|+.|++++|.+.+ +|. .+++|++|++++|.+++ +|. +. ++|+.|+|++|.++ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999987 565 67899999999999986 554 57899999999999986 666 55 89999999999998 56
Q ss_pred cccCCCCCCC-------CEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCC
Q 007553 229 PPTIGNLTYL-------TSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYL 283 (599)
Q Consensus 229 ~~~~~~l~~L-------~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~ 283 (599)
|. +.. +| +.|++++|.++ .+|..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 65 544 77 99999999998 478878889999999999999998877766543
No 106
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=5.4e-19 Score=165.14 Aligned_cols=151 Identities=23% Similarity=0.302 Sum_probs=86.4
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecc
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLN 126 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n 126 (599)
+.++++++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++.+..|..|.++++|++|++++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45555555555 3444332 45666666666665555555556666666666666665555555666666666666666
Q ss_pred cccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcc
Q 007553 127 QLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNL 200 (599)
Q Consensus 127 ~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~ 200 (599)
.++...+..|.++++|++|++++|.+++..+..|..+++|++|+|++|.+.+..+..|..+++|++|++++|.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 66544444455566666666666666555555555556666666666655555444555555566666655554
No 107
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=6.1e-19 Score=164.82 Aligned_cols=153 Identities=26% Similarity=0.308 Sum_probs=138.1
Q ss_pred cEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeec
Q 007553 22 VTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQG 101 (599)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 101 (599)
+.++..+ +.++ .+|..+. ++|+.|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~-~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRG-KGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTT-SCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCC-CCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 6788887 6765 5676554 6899999999999987777899999999999999999988899999999999999999
Q ss_pred CcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccc
Q 007553 102 NKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVG 178 (599)
Q Consensus 102 n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~ 178 (599)
|++....+..|..+++|++|++++|.+.+..|..|.++++|++|++++|.+++..+..|..+++|++|+|++|.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99997766778999999999999999998889999999999999999999998877789999999999999998764
No 108
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.7e-19 Score=176.33 Aligned_cols=126 Identities=30% Similarity=0.436 Sum_probs=56.3
Q ss_pred CCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEE
Q 007553 66 SLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSL 145 (599)
Q Consensus 66 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 145 (599)
.+++|++|++++|.+... + .+..+++|++|++++|++.+..+ +..+++|++|++++|.+.+. ..+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEE
Confidence 344555555555554422 2 24445555555555555543322 44555555555555544431 124444555555
Q ss_pred ecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCccc
Q 007553 146 FLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLT 201 (599)
Q Consensus 146 ~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~ 201 (599)
++++|.+++. ..+..+++|+.|++++|.+.+. ..+..+++|++|++++|.++
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~ 169 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 169 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccc
Confidence 5555544432 2334444444444444444332 23333444444444444433
No 109
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=2.3e-19 Score=175.40 Aligned_cols=172 Identities=30% Similarity=0.378 Sum_probs=114.1
Q ss_pred CCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCE
Q 007553 41 GALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTH 120 (599)
Q Consensus 41 ~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~ 120 (599)
..+++|++|++++|.++. ++ .+..+++|++|++++|.+++..+ +.++++|++|++++|++.+. ..+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCE
T ss_pred hhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCE
Confidence 456667777777777663 33 36667777777777777765433 66777777777777776642 23667777777
Q ss_pred EeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcc
Q 007553 121 LDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNL 200 (599)
Q Consensus 121 L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~ 200 (599)
|++++|.+.+. ..+..+++|++|++++|.+++. ..+..+++|++|++++|.+.+..+ +..+++|++|++++|.+
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 77777776643 3466777777777777777654 456667777777777777765433 66777777777777777
Q ss_pred cccCchhccCCCCCCEEeCCCCcCcc
Q 007553 201 TGPIPSTIGFLNLLDELRLSHNRLDG 226 (599)
Q Consensus 201 ~~~~~~~~~~l~~L~~L~l~~n~l~~ 226 (599)
++. + .+..+++|+.|++++|.+..
T Consensus 191 ~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 191 SDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCC-h-hhccCCCCCEEECcCCcccC
Confidence 642 3 36677777777777777664
No 110
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.79 E-value=4.4e-20 Score=183.76 Aligned_cols=123 Identities=20% Similarity=0.213 Sum_probs=98.8
Q ss_pred cHHHHHHHhhhccccceecccCCceEEEEEeC------CCCEEEEEEecCCch--hhHHHHHHhhc--cccc-cC-----
Q 007553 474 TFEEMIQATEDFHIKYCIGTGGYGSVYRAQLS------SGRVVALKKLHRSET--EELAFLETSST--DFRH-YN----- 537 (599)
Q Consensus 474 ~~~~l~~at~~~~~~~~lg~g~~g~v~~~~~~------~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H-~n----- 537 (599)
...+++...++|...+.||+|+||+||+|.+. .++.||||++..... +.++|.+|+.+ +++| ||
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 34455555677888889999999999999863 235899999976543 25679999998 8866 88
Q ss_pred ---C-CCCCcceeecccccc--cccccCCC-------------CCCCCChHHHHHHHHHHHHHHhhhhCCCCcccccccc
Q 007553 538 ---S-HTDNDDSSDEHLANN--EHFLSAPE-------------NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRL 598 (599)
Q Consensus 538 ---~-~~~~~~lv~e~~~~G--~~~l~~~~-------------~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl 598 (599)
. .++.+++|||||++| .+||+.+. ....++|.+++.||.|||+||+||| +.+||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCcc
Confidence 2 345689999999999 88987432 1345899999999999999999999 789999999
Q ss_pred C
Q 007553 599 Y 599 (599)
Q Consensus 599 ~ 599 (599)
|
T Consensus 212 K 212 (353)
T 4ase_A 212 A 212 (353)
T ss_dssp S
T ss_pred C
Confidence 7
No 111
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=8.9e-19 Score=163.69 Aligned_cols=152 Identities=22% Similarity=0.270 Sum_probs=90.1
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCC-ccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeec
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIP-LEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSL 125 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p-~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~ 125 (599)
+++++++|.++ .+|..+ .+.+++|+|++|.+++..| ..|.++++|++|+|++|++++..+..|..+++|++|++++
T Consensus 14 ~~l~~s~n~l~-~iP~~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 45666666665 345433 2345666666666665433 3355666666666666666655555566666666666666
Q ss_pred ccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCccc
Q 007553 126 NQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLT 201 (599)
Q Consensus 126 n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~ 201 (599)
|.+++..++.+.++++|++|++++|.+++..|..|..+++|++|+|++|.+.+..|..|..+++|++|++++|.+.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 6666555555666666666666666666555555666666666666666666555555666666666666666554
No 112
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=5.8e-19 Score=189.02 Aligned_cols=173 Identities=25% Similarity=0.332 Sum_probs=101.0
Q ss_pred ccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCC
Q 007553 15 FTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDL 94 (599)
Q Consensus 15 l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 94 (599)
+..+++|+.|++.+ +.+.. +| .+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+.+ +| .+..+++|
T Consensus 39 ~~~L~~L~~L~l~~-n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L 111 (605)
T 1m9s_A 39 QNELNSIDQIIANN-SDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKL 111 (605)
T ss_dssp HHHHTTCCCCBCTT-CCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTC
T ss_pred hhcCCCCCEEECcC-CCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCC
Confidence 44566666666665 45442 22 35566666666666666654333 5566666666666666653 22 45666666
Q ss_pred cEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccc
Q 007553 95 YDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYN 174 (599)
Q Consensus 95 ~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n 174 (599)
++|+|++|++.+. ..+..+++|+.|++++|.+.+. ..+..+++|++|+|++|.+++..| +..+++|+.|+|++|
T Consensus 112 ~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 185 (605)
T 1m9s_A 112 KSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 185 (605)
T ss_dssp CEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred CEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCC
Confidence 6666666666542 3456666666666666666543 445666666666666666665433 556666666666666
Q ss_pred cccccCccccCCCCCCCEEEccCCcccc
Q 007553 175 NLVGPLPKEVGNLKNLDSLLLNRNNLTG 202 (599)
Q Consensus 175 ~~~~~~~~~l~~l~~L~~L~l~~n~~~~ 202 (599)
.+.+. ..+..+++|+.|++++|.+.+
T Consensus 186 ~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 186 HISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 66543 245566666666666665543
No 113
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=5.1e-19 Score=178.76 Aligned_cols=176 Identities=26% Similarity=0.233 Sum_probs=108.7
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCC-CCCCCcEEEeecCcCCccCCccccCCCcCCEEeeec
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFG-NLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSL 125 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~ 125 (599)
++++++++.++ .+|..+. +.+++|+|++|.+++..+..|. ++++|++|+|++|++.+..+..|..+++|++|++++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56677776666 4554332 3466777777777666565665 667777777777777665556666677777777777
Q ss_pred ccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCcccc---CCCCCCCEEEccCCcccc
Q 007553 126 NQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEV---GNLKNLDSLLLNRNNLTG 202 (599)
Q Consensus 126 n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l---~~l~~L~~L~l~~n~~~~ 202 (599)
|.+....+..|.++++|++|+|++|.++...+..|..+++|++|+|++|.+....+..| ..+++|+.|++++|.++.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 77666555566666777777777776666556666666666666666666665433333 345666666666666654
Q ss_pred cCchhccCCCC--CCEEeCCCCcCc
Q 007553 203 PIPSTIGFLNL--LDELRLSHNRLD 225 (599)
Q Consensus 203 ~~~~~~~~l~~--L~~L~l~~n~l~ 225 (599)
..+..+..++. ++.|++++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 44444444444 255555555544
No 114
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=2.8e-19 Score=191.50 Aligned_cols=171 Identities=29% Similarity=0.376 Sum_probs=92.1
Q ss_pred CCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCE
Q 007553 41 GALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTH 120 (599)
Q Consensus 41 ~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~ 120 (599)
..+++|+.|++++|.++. ++ .+..+++|++|+|++|.+++..| |..+++|+.|+|++|.+.+. | .+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-S-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-T-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-h-hhccCCCCCE
Confidence 445566666666666652 33 35556666666666666654333 55666666666666665532 2 4555666666
Q ss_pred EeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcc
Q 007553 121 LDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNL 200 (599)
Q Consensus 121 L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~ 200 (599)
|++++|.+.+. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+..| +..+++|+.|+|++|.+
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCC
Confidence 66666655532 2355555556666555555543 345555555555555555554333 45555555555555555
Q ss_pred cccCchhccCCCCCCEEeCCCCcCc
Q 007553 201 TGPIPSTIGFLNLLDELRLSHNRLD 225 (599)
Q Consensus 201 ~~~~~~~~~~l~~L~~L~l~~n~l~ 225 (599)
++. ..+..+++|+.|+|++|.+.
T Consensus 188 ~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 188 SDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CBC--GGGTTCTTCSEEECCSEEEE
T ss_pred CCC--hHHccCCCCCEEEccCCcCc
Confidence 432 23444555555555555444
No 115
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=5.6e-19 Score=178.49 Aligned_cols=176 Identities=25% Similarity=0.203 Sum_probs=154.3
Q ss_pred cEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCC-CCCCCCEEeccCCcccccCCccCCCCCCCcEEEee
Q 007553 22 VTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIG-SLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQ 100 (599)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~-~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 100 (599)
+++++.+ +.++ .+|..+. +.+++|+|++|.+++..+..|. .+++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 21 ~~l~c~~-~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSK-QQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCS-SCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCC-CCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 6888887 7776 5776553 4689999999999988888887 99999999999999998888899999999999999
Q ss_pred cCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccc---cCCCCCCeeeccccccc
Q 007553 101 GNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTL---YHLNQLSTLYLAYNNLV 177 (599)
Q Consensus 101 ~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l---~~l~~L~~L~l~~n~~~ 177 (599)
+|++....+..|..+++|++|++++|.+....+..|.++++|++|+|++|.++...+..| ..+++|+.|+|++|.+.
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998877889999999999999999998889999999999999999999997655555 56999999999999999
Q ss_pred ccCccccCCCCC--CCEEEccCCccc
Q 007553 178 GPLPKEVGNLKN--LDSLLLNRNNLT 201 (599)
Q Consensus 178 ~~~~~~l~~l~~--L~~L~l~~n~~~ 201 (599)
...+..+..++. ++.|++++|.+.
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ccCHHHhhhccHhhcceEEecCCCcc
Confidence 777677887877 489999999875
No 116
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=2.8e-18 Score=160.28 Aligned_cols=156 Identities=18% Similarity=0.226 Sum_probs=120.6
Q ss_pred CEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCC-cccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCC
Q 007553 215 DELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLP-REVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGY 293 (599)
Q Consensus 215 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~ 293 (599)
+.+++++|.++ .+|..+ .+.+++|++++|.+++..+ ..|..+++|+.|+|++|.+++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 46777777766 345433 2356778888887776543 3467788888888888888777666788888888888888
Q ss_pred CCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCC
Q 007553 294 NQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIP 373 (599)
Q Consensus 294 n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~ 373 (599)
|.+++..+..|..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88887777778888888888888888887777888888888888888888887778888888888888888888887665
No 117
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.78 E-value=1.1e-19 Score=179.38 Aligned_cols=113 Identities=15% Similarity=0.090 Sum_probs=90.0
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
++|...+.||+|+||+||+|+. .+|+.||||++.... .+...|.+|+.+ +++||| .+.+.+|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 3567778899999999999985 579999999997543 224679999998 999999 46778999999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||++| .++|..++ ...+++.+...|+.||+.||+||| ..+|+|||||
T Consensus 104 y~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlK 152 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVH---DRKILHRDIK 152 (350)
T ss_dssp CCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCC
T ss_pred CCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCC
Confidence 99999 88887432 335788999999999999999999 7899999997
No 118
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=3.1e-18 Score=161.17 Aligned_cols=153 Identities=29% Similarity=0.298 Sum_probs=105.5
Q ss_pred CCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeec
Q 007553 46 LKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSL 125 (599)
Q Consensus 46 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~ 125 (599)
.+.++++++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++....+..|..+++|++|++++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 356777777776 5554432 6777777777777766677777777777777777777655555567777777777777
Q ss_pred ccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccc
Q 007553 126 NQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTG 202 (599)
Q Consensus 126 n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~ 202 (599)
|.++...+..+..+++|++|++++|+++ .+|..+..+++|++|+|++|.+.+..+..+..+++|+.|++++|.+..
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 7777666666677777777777777776 456666667777777777777766555556667777777777776553
No 119
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.78 E-value=1.1e-19 Score=179.13 Aligned_cols=109 Identities=19% Similarity=0.200 Sum_probs=93.6
Q ss_pred hccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh-hHHHHHHhhc--cccccC--------CCCCCcceeecccc
Q 007553 484 DFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE-ELAFLETSST--DFRHYN--------SHTDNDDSSDEHLA 551 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~~ 551 (599)
.|.....||+|+||+||+|+. .+|+.||||++...... ...+.+|+.+ .++||| .+.+.+|+|||||+
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 154 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 466667799999999999996 47999999999754332 4568899998 999999 46788999999999
Q ss_pred cc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 552 NN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 552 ~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+| .+++... .+++.+...++.||+.||+||| ..+|+|||||
T Consensus 155 gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlK 197 (346)
T 4fih_A 155 GGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 197 (346)
T ss_dssp TEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred CCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCC
Confidence 99 7788742 3899999999999999999999 7899999997
No 120
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.77 E-value=2.1e-19 Score=175.28 Aligned_cols=114 Identities=17% Similarity=0.206 Sum_probs=92.4
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------CC----------
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------SH---------- 539 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~~---------- 539 (599)
.+|...+.||+|+||+||+|+. .+|+.||||+++....+ ...+.+|+.+ +++||| ..
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4688888999999999999995 47999999999754433 4678999998 999999 11
Q ss_pred --CCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 540 --TDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 540 --~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
...+++|||||++| .+++..+......++...+.|+.||+.||+||| +.+|+|||||
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlK 145 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLK 145 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCc
Confidence 11268999999999 888986544445677888999999999999999 7899999997
No 121
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.3e-18 Score=159.85 Aligned_cols=153 Identities=19% Similarity=0.270 Sum_probs=91.1
Q ss_pred CCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCE
Q 007553 41 GALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTH 120 (599)
Q Consensus 41 ~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~ 120 (599)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++.+..+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45666677777777666 444 4666666777777766554 2235666666666666666666555566666666666
Q ss_pred EeeecccccccCCccccCCCcccEEecccCc-cCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCc
Q 007553 121 LDLSLNQLSGRLPQEVGNLKNLVSLFLDNNN-LTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNN 199 (599)
Q Consensus 121 L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~-i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 199 (599)
|++++|.+++..+..+..+++|++|++++|. ++ .++ .+..+++|++|++++|.+.+. + .+..+++|++|++++|.
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 6666666665555566666666666666665 43 233 455566666666666665542 1 45555556666655555
Q ss_pred cc
Q 007553 200 LT 201 (599)
Q Consensus 200 ~~ 201 (599)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 43
No 122
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.77 E-value=2.3e-19 Score=173.27 Aligned_cols=109 Identities=19% Similarity=0.201 Sum_probs=89.2
Q ss_pred ccceecccCCceEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC----C--------CCCCcceeec
Q 007553 487 IKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN----S--------HTDNDDSSDE 548 (599)
Q Consensus 487 ~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n----~--------~~~~~~lv~e 548 (599)
....||+|+||+||+|.. .+++.||||++.... .....|.+|+.+ +++||| . ..+.+++|||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 345699999999999996 468999999996532 224679999998 999999 1 1345799999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||++| .+++... ..+++.+...|+.||++||+|||+ ..++|+|||||
T Consensus 110 y~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~-~~~~IiHRDlK 158 (290)
T 3fpq_A 110 LMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHT-RTPPIIHRDLK 158 (290)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT-SSSCCCCCCCC
T ss_pred CCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH-CCCCEEecccC
Confidence 99999 8888742 358999999999999999999993 23469999997
No 123
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.4e-18 Score=159.56 Aligned_cols=156 Identities=17% Similarity=0.190 Sum_probs=135.5
Q ss_pred cccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCC
Q 007553 14 NFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKD 93 (599)
Q Consensus 14 ~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~ 93 (599)
..+.+++|++|++++ +.+. .+| .+..+++|++|++++|.++. +..+..+++|++|++++|.+++..|..|.++++
T Consensus 39 ~~~~l~~L~~L~l~~-n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 113 (197)
T 4ezg_A 39 TEAQMNSLTYITLAN-INVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTS 113 (197)
T ss_dssp BHHHHHTCCEEEEES-SCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTT
T ss_pred ChhhcCCccEEeccC-CCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCC
Confidence 346789999999998 8877 566 68999999999999998763 346899999999999999999878889999999
Q ss_pred CcEEEeecCcCCccCCccccCCCcCCEEeeeccc-ccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecc
Q 007553 94 LYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQ-LSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLA 172 (599)
Q Consensus 94 L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~ 172 (599)
|++|++++|++.+..|..+..+++|++|++++|. +. .+| .+.++++|++|++++|.+++. + .+..+++|++|+++
T Consensus 114 L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~ 189 (197)
T 4ezg_A 114 LTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAF 189 (197)
T ss_dssp CCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEEC
T ss_pred CCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEee
Confidence 9999999999998778899999999999999998 66 445 689999999999999999864 3 78899999999999
Q ss_pred cccccc
Q 007553 173 YNNLVG 178 (599)
Q Consensus 173 ~n~~~~ 178 (599)
+|++.+
T Consensus 190 ~N~i~~ 195 (197)
T 4ezg_A 190 SQTIGG 195 (197)
T ss_dssp BC----
T ss_pred CcccCC
Confidence 998763
No 124
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=1.2e-17 Score=157.20 Aligned_cols=156 Identities=25% Similarity=0.270 Sum_probs=124.2
Q ss_pred CCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCC
Q 007553 214 LDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGY 293 (599)
Q Consensus 214 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~ 293 (599)
-+.++++++.+. .+|..+ .++|++|++++|.+++..|..|..+++|+.|+|++|.+....+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345777777766 444433 27788888888888877777788888888888888888655556677888888888888
Q ss_pred CCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccCC
Q 007553 294 NQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVIP 373 (599)
Q Consensus 294 n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~ 373 (599)
|.+++..+..|..+++|+.|++++|.++ .+|..+..+++|+.|++++|++++..+..+..+++|+.|++++|++.+.++
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8888766666788888899999988888 677778888899999999999987666778888999999999999887765
No 125
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.76 E-value=3.1e-19 Score=180.49 Aligned_cols=110 Identities=19% Similarity=0.199 Sum_probs=94.7
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh-hHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE-ELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
..|.....||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ .++||| .+.+.+|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 3466677899999999999996 46999999999765433 4568899998 999999 4678899999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++... .+++.+...|+.||+.||+||| ..+|||||||
T Consensus 231 ~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiK 274 (423)
T 4fie_A 231 EGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 274 (423)
T ss_dssp TTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred CCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCC
Confidence 999 7788643 3899999999999999999999 7899999997
No 126
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.76 E-value=3.1e-19 Score=173.26 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=95.8
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch----hhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET----EELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~----~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|...+.||+|+||+||+|+. .+|+.||||.+..... ....+.+|+.+ +++||| .+.+.+++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4688888999999999999995 5799999999975421 14568899998 999999 4677899999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++... ..+++.+...++.||+.||+||| ..+|+|||||
T Consensus 112 Ey~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlK 159 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLK 159 (311)
T ss_dssp CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCC
Confidence 999999 8888743 34899999999999999999999 7899999997
No 127
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.75 E-value=4.6e-19 Score=174.22 Aligned_cols=107 Identities=15% Similarity=0.108 Sum_probs=91.3
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCCCcceeecccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTDNDDSSDEHLA 551 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~~ 551 (599)
+.|.....||+|+||+||+|+. .+|+.||||+++.... +.+|+.+ .++||| .+.+.+++|||||+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 133 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 4566677899999999999995 5699999999975432 2468887 999999 46777899999999
Q ss_pred cc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 552 NN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 552 ~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+| .++|+.. ..+++.+...++.||++||+||| ..+|||||||
T Consensus 134 gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlK 177 (336)
T 4g3f_A 134 GGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVK 177 (336)
T ss_dssp TCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCC
T ss_pred CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccC
Confidence 99 8888743 35999999999999999999999 7899999997
No 128
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.75 E-value=9.6e-19 Score=167.41 Aligned_cols=111 Identities=18% Similarity=0.167 Sum_probs=90.1
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|...+.||+|+||+||+|.. .+|+.||||++...... ...+.+|+.+ +++||| .+.+..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 4677788899999999999985 57999999999754321 4568899998 999999 4677889999
Q ss_pred cccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||++++ .+++..+ ..+++.+...++.||+.||+||| +.+|+|||||
T Consensus 93 Ey~~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiK 139 (275)
T 3hyh_A 93 EYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLK 139 (275)
T ss_dssp ECCCEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred eCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCC
Confidence 999655 8888743 35999999999999999999999 7899999997
No 129
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.74 E-value=6.5e-19 Score=170.98 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=89.3
Q ss_pred hhccccceecccCCceEEEEEe----CCCCEEEEEEecCCch---hhHHHHHHhhc--cccccC--------CCCCCcce
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL----SSGRVVALKKLHRSET---EELAFLETSST--DFRHYN--------SHTDNDDS 545 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~----~~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n--------~~~~~~~l 545 (599)
++|...+.||+|+||+||+|+. ..++.||||.++.... +...+.+|+.+ +++||| .+.+.+++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4677788999999999999984 2478999999975432 23468889988 999999 46788999
Q ss_pred eecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||||++| .+++... ..+++.+...++.||+.||+||| +.+|+|||||
T Consensus 104 vmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlK 153 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLK 153 (304)
T ss_dssp EECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCC
T ss_pred EEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCC
Confidence 99999999 8888743 34899999999999999999999 7899999997
No 130
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=1.9e-20 Score=199.28 Aligned_cols=203 Identities=23% Similarity=0.238 Sum_probs=125.0
Q ss_pred CCCCCcEEEeecCcCCccCCccccCCCcCCEEeeeccc-------------ccccCCccccCCCcccEEe-cccCccCCC
Q 007553 90 NLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQ-------------LSGRLPQEVGNLKNLVSLF-LDNNNLTGP 155 (599)
Q Consensus 90 ~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~-------------i~~~~~~~l~~l~~L~~L~-l~~n~i~~~ 155 (599)
.+++|+.|+|++|++. .+|..++++++|+.|++++|. ..+..|..++++++|+.|+ ++.|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~--- 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL--- 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH---
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc---
Confidence 3445555555555543 344445555555555543332 3444556666777777776 554432
Q ss_pred CcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCC
Q 007553 156 IPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNL 235 (599)
Q Consensus 156 ~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 235 (599)
..|+.+.+++|.+....+ ..|+.|++++|.+++ +|. +..+++|+.|++++|.++ .+|..+..+
T Consensus 423 --------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred --------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 234445555555543211 236777777777765 454 677777777777777777 666677777
Q ss_pred CCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecC-CcCccCCCCCCEEECCCCCCccCCCcc---CcCCCCCC
Q 007553 236 TYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPI-PPTIGYLTNLTSLNLGYNQLNSSIPPE---LMNCSQLQ 311 (599)
Q Consensus 236 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-~~~~~~~~~L~~L~ls~n~~~~~~~~~---~~~l~~L~ 311 (599)
++|+.|+|++|.+++ +| .++.+++|+.|+|++|.+++.. |..+..+++|+.|++++|.+++..|.. +..+++|+
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~ 563 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 563 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCS
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccC
Confidence 777777777777775 45 6777777777777777777665 677777777777777777777654422 23367777
Q ss_pred EEEc
Q 007553 312 NLAV 315 (599)
Q Consensus 312 ~L~l 315 (599)
.|++
T Consensus 564 ~L~l 567 (567)
T 1dce_A 564 SILT 567 (567)
T ss_dssp EEEC
T ss_pred ccCC
Confidence 7753
No 131
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=2.4e-20 Score=198.58 Aligned_cols=217 Identities=21% Similarity=0.177 Sum_probs=114.3
Q ss_pred cCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCE
Q 007553 113 GNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDS 192 (599)
Q Consensus 113 ~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~ 192 (599)
..+++|+.|++++|.+. .+|..++.+++|++|++++|......+.. +..+...+..|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhccc
Confidence 45677777777777776 56777777777777777655311000000 0011122333444444555555
Q ss_pred EE-ccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcc
Q 007553 193 LL-LNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNN 271 (599)
Q Consensus 193 L~-l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 271 (599)
|+ ++.|.+. .|..+.+++|.+....+ ..|+.|++++|.+++ +|. ++.+++|+.|+|++|.
T Consensus 414 L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYLD-----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHHH-----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhcccc-----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 54 3333221 12222333333332111 125555555555554 343 5555666666666666
Q ss_pred eeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCC-CccccCCCCCCEEeCCCccccccCCc
Q 007553 272 LIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSI-PSEIGNLIHLRQLDLSHNFINGTIPS 350 (599)
Q Consensus 272 l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~ 350 (599)
++ .+|..+..+++|+.|+|++|.+++ +| .+..+++|+.|+|++|.+++.. |..++.+++|+.|++++|.+++..|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 55 455556666666666666666654 34 5566666666666666666554 66666666666666666666654332
Q ss_pred c---cCCCCCCCEEEC
Q 007553 351 Q---LGKIPNVSEVDV 363 (599)
Q Consensus 351 ~---~~~~~~L~~L~l 363 (599)
. +..+++|+.||+
T Consensus 552 ~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 552 QERLAEMLPSVSSILT 567 (567)
T ss_dssp TTHHHHHCTTCSEEEC
T ss_pred HHHHHHHCcccCccCC
Confidence 1 223566666653
No 132
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=2.5e-18 Score=171.51 Aligned_cols=222 Identities=14% Similarity=0.056 Sum_probs=121.0
Q ss_pred CCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccc----cccCccccCCCCCC
Q 007553 115 LTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNL----VGPLPKEVGNLKNL 190 (599)
Q Consensus 115 l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~----~~~~~~~l~~l~~L 190 (599)
+++|+.|.+.+ .++.+.+.+|.++++|+++++.+|.+....+..|..+.++..+.+..+.. .......|..+..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 56666666655 55545555566666666666666655544444555555555444433211 11122234444444
Q ss_pred C-EEEccCCcc-cccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEecc
Q 007553 191 D-SLLLNRNNL-TGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLD 268 (599)
Q Consensus 191 ~-~L~l~~n~~-~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~ 268 (599)
+ .+.+..... ............++..+.+.++-...........+++|+.+++++|.++...+..|..+++|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 4 333332211 00000011123445555554432111111111125677777777777766555667777777777777
Q ss_pred CcceeecCCcCccCCCCCC-EEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeC
Q 007553 269 RNNLIGPIPPTIGYLTNLT-SLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDL 339 (599)
Q Consensus 269 ~n~l~~~~~~~~~~~~~L~-~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 339 (599)
+| +.......|.++.+|+ .+++.+ .++.+.+.+|.+|++|+.+++++|.++...+.+|.++++|+.++.
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 66 5555556677777777 777776 565556667777777887777777777666667777777777753
No 133
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=3.3e-18 Score=164.45 Aligned_cols=168 Identities=24% Similarity=0.294 Sum_probs=90.5
Q ss_pred CCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEE
Q 007553 18 FPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDL 97 (599)
Q Consensus 18 l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L 97 (599)
+.++..+++.+ +.+++.. .+..+++|++|++++|.++ .++ .+..+++|++|+|++|.+++..+ |.++++|++|
T Consensus 18 l~~l~~l~l~~-~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 18 LANAVKQNLGK-QSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHTC-SCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHhcC-CCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 34445555555 4444222 3455666666666666665 333 45556666666666666654333 5666666666
Q ss_pred EeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccccccc
Q 007553 98 RLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLV 177 (599)
Q Consensus 98 ~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~ 177 (599)
++++|++.+. |. +.. ++|++|++++|.+++. ..+.++++|++|++++|++++. + .+..+++|++|++++|.+.
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 6666666542 22 222 5566666666665532 2355556666666666655543 2 3555555555555555555
Q ss_pred ccCccccCCCCCCCEEEccCCccc
Q 007553 178 GPLPKEVGNLKNLDSLLLNRNNLT 201 (599)
Q Consensus 178 ~~~~~~l~~l~~L~~L~l~~n~~~ 201 (599)
+. ..+..+++|+.|++++|.+.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEE
T ss_pred ch--HHhccCCCCCEEeCCCCccc
Confidence 43 34455555555555555544
No 134
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=2.2e-18 Score=171.83 Aligned_cols=102 Identities=17% Similarity=0.053 Sum_probs=48.0
Q ss_pred CCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCC-EEeccCcceeecCCcCccCCCCCCEE
Q 007553 211 LNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLD-SLSLDRNNLIGPIPPTIGYLTNLTSL 289 (599)
Q Consensus 211 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~~~~~~~~~L~~L 289 (599)
+++|+.|+|++|.++......|.++++|+++++.+| +....+..|.++++|+ .+++.+ .+....+..|.++++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 344555555554444333344455555555555444 3333344445555554 555544 3333333444445555555
Q ss_pred ECCCCCCccCCCccCcCCCCCCEEE
Q 007553 290 NLGYNQLNSSIPPELMNCSQLQNLA 314 (599)
Q Consensus 290 ~ls~n~~~~~~~~~~~~l~~L~~L~ 314 (599)
+++.|++....+.+|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 5544444444444445555554443
No 135
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.72 E-value=5.7e-18 Score=171.58 Aligned_cols=110 Identities=19% Similarity=0.256 Sum_probs=92.8
Q ss_pred hccccceecccCCceEEEEEe-CCCCEEEEEEecCCch---hhHHHHHHhhc--cccccC--------------CCCCCc
Q 007553 484 DFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET---EELAFLETSST--DFRHYN--------------SHTDND 543 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n--------------~~~~~~ 543 (599)
+|...+.||+|+||+||+|.. .+|+.||||++..... ....+.+|+.+ .++||| .+.+.+
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 477778899999999999995 5799999999965432 24578899998 999999 123567
Q ss_pred ceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 544 DSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++|||||++| .+++..+ ..+++.+...++.||+.||+||| +.+|+|||||
T Consensus 135 ~ivmE~~~g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlK 185 (398)
T 4b99_A 135 YVVLDLMESDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLK 185 (398)
T ss_dssp EEEEECCSEEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCC
T ss_pred EEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcC
Confidence 9999999877 8888742 35999999999999999999999 8899999997
No 136
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=5.4e-17 Score=155.95 Aligned_cols=160 Identities=24% Similarity=0.250 Sum_probs=137.6
Q ss_pred CCcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCccccc
Q 007553 4 NGNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGS 83 (599)
Q Consensus 4 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~ 83 (599)
.+.+.+++ .+..+++|++|++.+ +.+. .+| .+..+++|++|++++|.+++..+ +..+++|++|++++|++++.
T Consensus 28 ~~~i~~~~--~~~~l~~L~~L~l~~-n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l 100 (263)
T 1xeu_A 28 KQSVTDLV--SQKELSGVQNFNGDN-SNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNL 100 (263)
T ss_dssp CSCTTSEE--CHHHHTTCSEEECTT-SCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCC
T ss_pred CCCccccc--chhhcCcCcEEECcC-CCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCc
Confidence 34566666 488999999999998 7776 455 68899999999999999996544 99999999999999999864
Q ss_pred CCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCC
Q 007553 84 IPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHL 163 (599)
Q Consensus 84 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l 163 (599)
|. +.. ++|++|++++|++++. ..+..+++|++|++++|.+++. + .+..+++|++|++++|.+++. ..+..+
T Consensus 101 -~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l 171 (263)
T 1xeu_A 101 -NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRL 171 (263)
T ss_dssp -TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTC
T ss_pred -Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccC
Confidence 43 333 9999999999999864 4699999999999999999965 3 689999999999999999976 678999
Q ss_pred CCCCeeeccccccccc
Q 007553 164 NQLSTLYLAYNNLVGP 179 (599)
Q Consensus 164 ~~L~~L~l~~n~~~~~ 179 (599)
++|+.|++++|.+...
T Consensus 172 ~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 172 KKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCCCEEEEEEEEEECC
T ss_pred CCCCEEeCCCCcccCC
Confidence 9999999999998865
No 137
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.70 E-value=2.3e-17 Score=164.43 Aligned_cols=130 Identities=26% Similarity=0.354 Sum_probs=110.8
Q ss_pred CccccHHHHHHHhhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------
Q 007553 470 DGRITFEEMIQATEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETE--ELAFLETSST--DFRHYN-------- 537 (599)
Q Consensus 470 ~~~~~~~~l~~at~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n-------- 537 (599)
...+++.++..++++|...+.||+|+||.||+|...+|+.||||++...... ...|.+|+.+ .++|||
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 3468899999999999999999999999999999878999999999765432 3468899988 999999
Q ss_pred CCCCCcceeecccccc--cccccCCC-CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 538 SHTDNDDSSDEHLANN--EHFLSAPE-NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 538 ~~~~~~~lv~e~~~~G--~~~l~~~~-~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
...+..++||||+++| .+++.... ....++|.++..|+.||++||+|||+.+.++|+||||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlk 161 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVK 161 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCS
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCc
Confidence 4667789999999999 88887643 33569999999999999999999997777799999996
No 138
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=9.9e-17 Score=143.12 Aligned_cols=132 Identities=27% Similarity=0.184 Sum_probs=75.0
Q ss_pred CCCCEEEcccCcCc-ccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEe
Q 007553 44 SRLKVLDLSYNRLT-GTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLD 122 (599)
Q Consensus 44 ~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~ 122 (599)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..|..+++|++|++++|++.+.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 55666666666665 45555555666666666666666543 4555666666666666666554555555566666666
Q ss_pred eecccccccC-CccccCCCcccEEecccCccCCCCc---ccccCCCCCCeeeccccccc
Q 007553 123 LSLNQLSGRL-PQEVGNLKNLVSLFLDNNNLTGPIP---STLYHLNQLSTLYLAYNNLV 177 (599)
Q Consensus 123 l~~n~i~~~~-~~~l~~l~~L~~L~l~~n~i~~~~~---~~l~~l~~L~~L~l~~n~~~ 177 (599)
+++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666655431 1445555666666666665554333 24555555555555555544
No 139
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.68 E-value=2.1e-15 Score=153.40 Aligned_cols=267 Identities=10% Similarity=0.028 Sum_probs=194.9
Q ss_pred cCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCc
Q 007553 16 TCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLY 95 (599)
Q Consensus 16 ~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 95 (599)
..+..++.+.+. +.++.--...|.++ +|+.+.+..+ ++..-..+|.++ +|+.+.+.+ .++...+.+|.++++|+
T Consensus 110 ~~~~~l~~i~ip--~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~ 183 (401)
T 4fdw_A 110 EILKGYNEIILP--NSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLK 183 (401)
T ss_dssp EECSSCSEEECC--TTCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCC
T ss_pred EecCCccEEEEC--CccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCC
Confidence 345677777776 35554445566665 6888888766 665666677774 688888886 56656677888888888
Q ss_pred EEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccccc
Q 007553 96 DLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNN 175 (599)
Q Consensus 96 ~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~ 175 (599)
.+++.+|++..+....|. ..+|+.+.+..+ +..+...+|.++++|+.+++..+ ++.....+|.+ .+|+.+.+ .+.
T Consensus 184 ~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~ 258 (401)
T 4fdw_A 184 KADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNG 258 (401)
T ss_dssp EEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETT
T ss_pred eeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCC
Confidence 888888888766556665 578888888744 66667778888888888888764 44444556776 67888888 445
Q ss_pred ccccCccccCCCCCCCEEEccCCccc-----ccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCC
Q 007553 176 LVGPLPKEVGNLKNLDSLLLNRNNLT-----GPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSG 250 (599)
Q Consensus 176 ~~~~~~~~l~~l~~L~~L~l~~n~~~-----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 250 (599)
+...-..+|..+++|+.+.+.+|.+. ......|..+++|+.+.+.. .+......+|.++++|+.+.+..+ ++.
T Consensus 259 i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~ 336 (401)
T 4fdw_A 259 VTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQ 336 (401)
T ss_dssp CCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCE
T ss_pred ccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccE
Confidence 55555678888888888888877654 34456788888999999884 466566678888999999999654 665
Q ss_pred CCCcccCCCCCCCEEeccCcceeecCCcCccCCC-CCCEEECCCCCC
Q 007553 251 LLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLT-NLTSLNLGYNQL 296 (599)
Q Consensus 251 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~-~L~~L~ls~n~~ 296 (599)
.....|.++ +|+.+++.+|.+.......|.+++ .++.|.+..+.+
T Consensus 337 I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 337 INFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp ECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 667788888 899999998887755556676664 678888776543
No 140
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.68 E-value=3.7e-15 Score=152.38 Aligned_cols=317 Identities=13% Similarity=0.038 Sum_probs=144.6
Q ss_pred cccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCC
Q 007553 6 NAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIP 85 (599)
Q Consensus 6 ~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p 85 (599)
++++|...+|.+|++|+.+.+.. .++.--..+|.+|++|+.+++..+ ++..-..+|.++.+|+.+.+..+ +.....
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~--~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~ 133 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS--TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGV 133 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT--TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECT
T ss_pred eEeEhHHHHhhCCCCceEEEeCC--CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecc
Confidence 35566666677777777776653 344333345666666776666544 44344455666666666666544 222444
Q ss_pred ccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCC
Q 007553 86 LEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQ 165 (599)
Q Consensus 86 ~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 165 (599)
.+|.++..++...... ........|.++++|+.+.+..+- ..+....|.++.+|+.+.+..+ ++......|.++..
T Consensus 134 ~aF~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~ 209 (394)
T 4fs7_A 134 EAFKGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECIL 209 (394)
T ss_dssp TTTTTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccccccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccc
Confidence 4555554333322222 122233456666666666665432 2244455666666666666544 33233344555555
Q ss_pred CCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccC
Q 007553 166 LSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSS 245 (599)
Q Consensus 166 L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 245 (599)
|+.+.+..+... +.+......+|+.+.+.... ...-...+..+..|+.+.+..+... .....|..+..++.+....
T Consensus 210 L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~ 285 (394)
T 4fs7_A 210 LENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGS 285 (394)
T ss_dssp CCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECS
T ss_pred cceeecCCCceE--eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCc
Confidence 655555443221 11222233445555443321 1112223444445555554443221 2233444444444444443
Q ss_pred CcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCC
Q 007553 246 NQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIP 325 (599)
Q Consensus 246 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 325 (599)
..+. ...|..+.+|+.+.+..+ +.......|.++.+|+.+++.++ ++..-..+|.+|.+|+.+.+..+ ++....
T Consensus 286 ~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~ 359 (394)
T 4fs7_A 286 VIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGA 359 (394)
T ss_dssp SEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECT
T ss_pred eeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehH
Confidence 3221 123444444444444332 22222333444444444444322 33233334444444444444333 322223
Q ss_pred ccccCCCCCCEEeCC
Q 007553 326 SEIGNLIHLRQLDLS 340 (599)
Q Consensus 326 ~~~~~l~~L~~L~l~ 340 (599)
.+|.++++|+.+++.
T Consensus 360 ~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 360 NAFQGCINLKKVELP 374 (394)
T ss_dssp TTBTTCTTCCEEEEE
T ss_pred HHhhCCCCCCEEEEC
Confidence 344444444444443
No 141
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.68 E-value=7e-18 Score=185.30 Aligned_cols=191 Identities=25% Similarity=0.199 Sum_probs=98.6
Q ss_pred CCCCEEEcccCcCcccCCcCCCCCCCCCE-----EeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcC
Q 007553 44 SRLKVLDLSYNRLTGTIPSEIGSLRDLLE-----LNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNL 118 (599)
Q Consensus 44 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~-----L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L 118 (599)
+.++.|+|.+|.+.. .+..+....+|+. +++..|.+. ..|..|..++.|+.|+|++|.+. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 456777777777663 3333322222222 223333333 44666777778888888888776 456666677788
Q ss_pred CEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCC
Q 007553 119 THLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRN 198 (599)
Q Consensus 119 ~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n 198 (599)
++|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..|..+++|++|+|++|.+. .+|..|+.+++|++|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 88888888777 66777777888888888888777 56777777778888888877776 45666777778888888888
Q ss_pred cccccCchhccCCCC-CCEEeCCCCcCcccCcccCCCCCCCCEEEccCC
Q 007553 199 NLTGPIPSTIGFLNL-LDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSN 246 (599)
Q Consensus 199 ~~~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 246 (599)
.+++.+|..+..+.. +..|++++|.+.+.+|. .|+.|+++.|
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTD 369 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C---------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecc
Confidence 777766665543321 22356677777666554 3344555544
No 142
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=2e-16 Score=144.31 Aligned_cols=128 Identities=29% Similarity=0.378 Sum_probs=62.3
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCc-cCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeec
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPL-EFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSL 125 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~-~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~ 125 (599)
++++++++.++ .+|..+. .+|++|++++|.+++..+. .|..+++|++|+|++|++++..|..|..+++|++|++++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45555555554 3443332 2455555555555543332 244555555555555555544444555555555555555
Q ss_pred ccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccccccc
Q 007553 126 NQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLV 177 (599)
Q Consensus 126 n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~ 177 (599)
|.+++..+..+.++++|++|++++|++++..|..|..+++|++|++++|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 5555444444444555555555555544444444444444444444444443
No 143
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.68 E-value=6.1e-18 Score=185.79 Aligned_cols=191 Identities=23% Similarity=0.207 Sum_probs=118.2
Q ss_pred CCCcEEeeCCCCCCeecCCcccCCCCCCCEEE-----cccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCC
Q 007553 19 PNLVTFRIWGTRFLSGRIPSETGALSRLKVLD-----LSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKD 93 (599)
Q Consensus 19 ~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~-----l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~ 93 (599)
+.++.|++.+ +.+.. .+..+.....|+.+. +..|.+. ..++.|..+++|++|+|++|.+. .+|..+.++++
T Consensus 173 ~~~~~l~L~~-n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~ 248 (727)
T 4b8c_D 173 PLTPKIELFA-NGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDF 248 (727)
T ss_dssp ----------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCS
T ss_pred CccceEEeeC-CCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCC
Confidence 5678888877 66553 343333333333332 3334444 55778889999999999999998 67777778999
Q ss_pred CcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccc
Q 007553 94 LYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAY 173 (599)
Q Consensus 94 L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~ 173 (599)
|++|+|++|.++ .+|..|.++++|++|+|++|.++ .+|..+.+|++|++|+|++|.++ .+|..|..+++|++|+|++
T Consensus 249 L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~ 325 (727)
T 4b8c_D 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEG 325 (727)
T ss_dssp CSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTT
T ss_pred CCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCC
Confidence 999999999998 77888999999999999999999 67888999999999999999987 6788899999999999999
Q ss_pred ccccccCccccCCCCC-CCEEEccCCcccccCchhccCCCCCCEEeCCCC
Q 007553 174 NNLVGPLPKEVGNLKN-LDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHN 222 (599)
Q Consensus 174 n~~~~~~~~~l~~l~~-L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n 222 (599)
|.+.+.+|..+..+.. +..+++.+|.+++.+|.. |+.|+++.|
T Consensus 326 N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 326 NPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred CccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 9999888777654322 234678889888777654 455666665
No 144
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.67 E-value=5.2e-15 Score=150.56 Aligned_cols=268 Identities=12% Similarity=0.103 Sum_probs=218.3
Q ss_pred CCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCE
Q 007553 41 GALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTH 120 (599)
Q Consensus 41 ~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~ 120 (599)
..+..++.+.+..+ ++..-..+|.++ +|+.+.+..+ ++.+...+|.++ +|+.+.+.. .+..+.+..|.++++|+.
T Consensus 110 ~~~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 110 EILKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp EECSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred EecCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCe
Confidence 34678888888764 565667788885 7999999887 666777889885 799999986 677677789999999999
Q ss_pred EeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcc
Q 007553 121 LDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNL 200 (599)
Q Consensus 121 L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~ 200 (599)
+++..|.++.+....|. ..+|+.+.+..+ +......+|.++++|+.+.+..+ +...-..+|.. .+|+.+.+. +.+
T Consensus 185 l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i 259 (401)
T 4fdw_A 185 ADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGV 259 (401)
T ss_dssp EECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTC
T ss_pred eecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCc
Confidence 99999999977777777 589999999855 66666678999999999999875 55555567776 799999994 445
Q ss_pred cccCchhccCCCCCCEEeCCCCcCc-----ccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeec
Q 007553 201 TGPIPSTIGFLNLLDELRLSHNRLD-----GPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGP 275 (599)
Q Consensus 201 ~~~~~~~~~~l~~L~~L~l~~n~l~-----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 275 (599)
...-...|..+++|+.+++.++.+. ...+..|.++++|+.+.+.+ .+.......|.++++|+.+.|..+ +...
T Consensus 260 ~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I 337 (401)
T 4fdw_A 260 TNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQI 337 (401)
T ss_dssp CEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEE
T ss_pred cEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEE
Confidence 5556778999999999999988765 34567899999999999994 577667788999999999999665 6656
Q ss_pred CCcCccCCCCCCEEECCCCCCccCCCccCcCCC-CCCEEEcccCcCc
Q 007553 276 IPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCS-QLQNLAVNHNSLS 321 (599)
Q Consensus 276 ~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~-~L~~L~l~~n~l~ 321 (599)
....|.++ +|+.+++++|......+..|.+++ .++.|++..+.+.
T Consensus 338 ~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 338 NFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 67789999 999999999988877777788875 7889999887653
No 145
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=1.8e-16 Score=144.64 Aligned_cols=109 Identities=28% Similarity=0.374 Sum_probs=45.2
Q ss_pred CCCEEEccCCcCCCCCCc-ccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEc
Q 007553 237 YLTSLDLSSNQLSGLLPR-EVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAV 315 (599)
Q Consensus 237 ~L~~L~l~~n~l~~~~~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l 315 (599)
+|++|++++|.+++..+. .+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+..|..+++|+.|++
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 444444444444433222 2334444444444444444333344444444444444444444333333444444444444
Q ss_pred ccCcCccCCCccccCCCCCCEEeCCCcccc
Q 007553 316 NHNSLSGSIPSEIGNLIHLRQLDLSHNFIN 345 (599)
Q Consensus 316 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 345 (599)
++|.+++..|..+..+++|+.|++++|.++
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 444444333444444444444444444443
No 146
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=3.1e-16 Score=139.86 Aligned_cols=133 Identities=26% Similarity=0.160 Sum_probs=102.1
Q ss_pred CCCCCEEeccCCccc-ccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEE
Q 007553 67 LRDLLELNLSYNILN-GSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSL 145 (599)
Q Consensus 67 l~~L~~L~L~~n~~~-~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 145 (599)
.++|++|++++|.++ +.+|..|..+++|++|++++|.+.+. ..+..+++|++|++++|.+.+.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 477889999999887 56777788888899999998888765 678888888888888888887677777778888888
Q ss_pred ecccCccCCCC-cccccCCCCCCeeecccccccccCc---cccCCCCCCCEEEccCCccc
Q 007553 146 FLDNNNLTGPI-PSTLYHLNQLSTLYLAYNNLVGPLP---KEVGNLKNLDSLLLNRNNLT 201 (599)
Q Consensus 146 ~l~~n~i~~~~-~~~l~~l~~L~~L~l~~n~~~~~~~---~~l~~l~~L~~L~l~~n~~~ 201 (599)
++++|.+++.. +..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888887542 2567777777777777777775543 35666777777777777654
No 147
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.66 E-value=6.8e-17 Score=160.64 Aligned_cols=124 Identities=21% Similarity=0.301 Sum_probs=104.1
Q ss_pred ccHHHHHHHhhhccccceecccCCceEEEEEeCCCCEEEEEEecCCch-hhHHHHHHhhc--cccccC--------CCCC
Q 007553 473 ITFEEMIQATEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSET-EELAFLETSST--DFRHYN--------SHTD 541 (599)
Q Consensus 473 ~~~~~l~~at~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~-~~~~f~~e~~~--~l~H~n--------~~~~ 541 (599)
+.+.++..++++|.....||+|+||.||+|...+|+.||||++..... ....|.+|+.+ .++||| ...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 344455567788888899999999999999988899999999876543 35678899988 999999 4667
Q ss_pred Ccceeecccccc--cccccCCC-CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 542 NDDSSDEHLANN--EHFLSAPE-NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 542 ~~~lv~e~~~~G--~~~l~~~~-~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..++||||+++| .+++.... ....++|.++..++.||++||+||| ..+|+||||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlk 166 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVK 166 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCC
Confidence 889999999999 88887543 2346899999999999999999999 7899999996
No 148
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=1e-16 Score=139.86 Aligned_cols=127 Identities=28% Similarity=0.239 Sum_probs=69.5
Q ss_pred CCCCEEEcccCcCc-ccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEe
Q 007553 44 SRLKVLDLSYNRLT-GTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLD 122 (599)
Q Consensus 44 ~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~ 122 (599)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..|..+++|++|++++|.+.+.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45566666666655 45555555566666666666655543 4455566666666666665554455555555566666
Q ss_pred eeccccccc-CCccccCCCcccEEecccCccCCCCc---ccccCCCCCCeeecc
Q 007553 123 LSLNQLSGR-LPQEVGNLKNLVSLFLDNNNLTGPIP---STLYHLNQLSTLYLA 172 (599)
Q Consensus 123 l~~n~i~~~-~~~~l~~l~~L~~L~l~~n~i~~~~~---~~l~~l~~L~~L~l~ 172 (599)
+++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 655555542 22445555555555555555554333 244455555555543
No 149
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.65 E-value=2.1e-16 Score=156.90 Aligned_cols=122 Identities=20% Similarity=0.222 Sum_probs=102.5
Q ss_pred ccccHHHHHHHhhh----------ccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh-hHHHHHHhhc--ccccc
Q 007553 471 GRITFEEMIQATED----------FHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE-ELAFLETSST--DFRHY 536 (599)
Q Consensus 471 ~~~~~~~l~~at~~----------~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~ 536 (599)
+.++++++..+++. |.....||+|+||.||+|... +|+.||||++...... ...+.+|+.+ +++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 46889999988875 445568999999999999975 7999999999765433 4668899988 99999
Q ss_pred C--------CCCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 537 N--------SHTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 537 n--------~~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
| ..++..++||||+++| .+++... .++|.++..++.||++||+||| ..+|+||||+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlk 168 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIK 168 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCC
Confidence 9 4567889999999999 7777642 4899999999999999999999 7899999996
No 150
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.65 E-value=2.7e-16 Score=155.21 Aligned_cols=125 Identities=22% Similarity=0.285 Sum_probs=107.3
Q ss_pred ccccHHHHHHHhhhcccc------ceecccCCceEEEEEeCCCCEEEEEEecCCc-----hhhHHHHHHhhc--cccccC
Q 007553 471 GRITFEEMIQATEDFHIK------YCIGTGGYGSVYRAQLSSGRVVALKKLHRSE-----TEELAFLETSST--DFRHYN 537 (599)
Q Consensus 471 ~~~~~~~l~~at~~~~~~------~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~-----~~~~~f~~e~~~--~l~H~n 537 (599)
..+++.++..++.+|... +.||+|+||.||+|.. +++.||||++.... .....|.+|+.+ .++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 458899999999999887 8899999999999997 68999999986532 124678899988 999999
Q ss_pred --------CCCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 538 --------SHTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 538 --------~~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
...+..++||||+++| .+++........++|..+..|+.||++||+||| ..+|+||||+
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlk 160 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIK 160 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCC
Confidence 5667889999999999 888875444456999999999999999999999 7899999986
No 151
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.64 E-value=1.3e-16 Score=169.90 Aligned_cols=112 Identities=16% Similarity=0.168 Sum_probs=96.3
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch-hhHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET-EELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~-~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
++|...+.||+|+||.||+|.. .+|+.||+|.+..... +...+.+|+.+ .++||| .+.+.+++|||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 4677778899999999999995 4799999999976543 35668889998 999999 4678899999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++..+. ..+++.+...++.||+.||+||| ..+|+|||||
T Consensus 237 ~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlK 282 (573)
T 3uto_A 237 SGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLK 282 (573)
T ss_dssp CCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred CCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCC
Confidence 999 78886533 34899999999999999999999 8899999997
No 152
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=1.7e-16 Score=138.52 Aligned_cols=130 Identities=22% Similarity=0.227 Sum_probs=116.6
Q ss_pred CCCCCcEEeeCCCCCCe-ecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCc
Q 007553 17 CFPNLVTFRIWGTRFLS-GRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLY 95 (599)
Q Consensus 17 ~l~~L~~L~l~~~~~~~-~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 95 (599)
..++|++|++++ +.+. +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|.+++.+|..+.++++|+
T Consensus 15 ~~~~l~~L~l~~-n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 91 (149)
T 2je0_A 15 TPSDVKELVLDN-SRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLT 91 (149)
T ss_dssp CGGGCSEEECTT-CBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCC
T ss_pred CCccCeEEEccC-CcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCC
Confidence 458899999999 8887 78999889999999999999999865 6789999999999999999977888888899999
Q ss_pred EEEeecCcCCcc-CCccccCCCcCCEEeeecccccccCC---ccccCCCcccEEeccc
Q 007553 96 DLRLQGNKLDGL-IPSSIGNLTNLTHLDLSLNQLSGRLP---QEVGNLKNLVSLFLDN 149 (599)
Q Consensus 96 ~L~L~~n~~~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~---~~l~~l~~L~~L~l~~ 149 (599)
+|++++|++.+. .+..+..+++|++|++++|.+++..+ ..+..+++|++|++++
T Consensus 92 ~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 92 HLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999999864 34789999999999999999997766 5789999999999864
No 153
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.3e-15 Score=138.87 Aligned_cols=127 Identities=32% Similarity=0.388 Sum_probs=71.9
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecc
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLN 126 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n 126 (599)
++++++++.++ .+|..+ .++|++|+|++|.++ .+|..|.++++|++|+|++|++++..+..|..+++|++|++++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45666666665 444433 245666666666665 44555666666666666666666555555666666666666666
Q ss_pred cccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccccccc
Q 007553 127 QLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLV 177 (599)
Q Consensus 127 ~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~ 177 (599)
.++...+..|.++++|++|++++|.++...+..|..+++|+.|++++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 665555555555566666666666555444444555555555555555443
No 154
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.64 E-value=1.3e-16 Score=159.91 Aligned_cols=110 Identities=19% Similarity=0.144 Sum_probs=91.1
Q ss_pred HHhhhccccceecccCCceEEEEEe----CCCCEEEEEEecCCchhhHHHHHHhhc--cc-cccC--------CCCCCcc
Q 007553 480 QATEDFHIKYCIGTGGYGSVYRAQL----SSGRVVALKKLHRSETEELAFLETSST--DF-RHYN--------SHTDNDD 544 (599)
Q Consensus 480 ~at~~~~~~~~lg~g~~g~v~~~~~----~~g~~vavK~l~~~~~~~~~f~~e~~~--~l-~H~n--------~~~~~~~ 544 (599)
...+.|...+.||+|+||+||+|+. ..++.||||++..... ...+.+|+.+ .+ +||| .+.+..+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 3345688888999999999999974 2467899999865433 3457788887 55 7999 4567889
Q ss_pred eeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+|||||++| .+++. .+++.+...++.||+.||+||| +.+|+|||||
T Consensus 97 lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiK 144 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVK 144 (361)
T ss_dssp EEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCC
Confidence 999999999 77774 2889999999999999999999 8899999997
No 155
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.62 E-value=4.5e-16 Score=157.71 Aligned_cols=112 Identities=22% Similarity=0.282 Sum_probs=94.5
Q ss_pred hhccccceecccCCceEEEEEeC----CCCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------CCCCCccee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS----SGRVVALKKLHRSET--EELAFLETSST--DFRHYN--------SHTDNDDSS 546 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~----~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~~~~~~~lv 546 (599)
.+|...+.||+|+||.||+|+.. ++..||||++..... ...+|.+|+.+ +++||| ...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 45677788999999999999864 577899999976432 35679999998 999999 466788999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .++++.. ...++|.+++.|+.|||+||+||| ..+|+||||+
T Consensus 125 ~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlk 174 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLA 174 (373)
T ss_dssp EECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred EeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCC
Confidence 9999999 8888753 235899999999999999999999 7899999996
No 156
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=2.4e-15 Score=137.08 Aligned_cols=128 Identities=25% Similarity=0.299 Sum_probs=115.8
Q ss_pred cEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeec
Q 007553 22 VTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQG 101 (599)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 101 (599)
+++++++ +.+. .+|..+. ++|++|++++|.++ .+|..|..+++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 13 ~~l~~~~-~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSN-KGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTT-SCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCC-CCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 6788887 7766 6776553 68999999999998 7888999999999999999999988888999999999999999
Q ss_pred CcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCC
Q 007553 102 NKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTG 154 (599)
Q Consensus 102 n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~ 154 (599)
|++++..+..|..+++|++|++++|.++...++.+..+++|+.|++++|.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99998888899999999999999999997777789999999999999998874
No 157
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.62 E-value=7.3e-16 Score=148.99 Aligned_cols=112 Identities=15% Similarity=0.157 Sum_probs=97.4
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCCCcceeeccccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTDNDDSSDEHLAN 552 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~~~ 552 (599)
++|...+.||+|+||.||+|...+++.||||++........++.+|+.+ +++||| ...+..++||||+++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 4566678899999999999998888999999998765556779999998 999999 466778999999999
Q ss_pred c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 553 N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 553 G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
| .+++.... ..+++.++..++.|+++||+||| ..+|+||||+
T Consensus 90 ~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dik 133 (269)
T 4hcu_A 90 GCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 133 (269)
T ss_dssp CBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred CcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcc
Confidence 9 88887533 35899999999999999999999 7899999996
No 158
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.62 E-value=3e-16 Score=166.13 Aligned_cols=111 Identities=22% Similarity=0.227 Sum_probs=90.6
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh----hHHHHHH---hhc--cccccC--------CCCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE----ELAFLET---SST--DFRHYN--------SHTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~----~~~f~~e---~~~--~l~H~n--------~~~~~~~ 544 (599)
++|...+.||+|+||.||+|+. .+|+.||||++...... .....+| +.+ .++||| .+.+.++
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 5788889999999999999996 46999999999653211 2223333 444 789999 4678899
Q ss_pred eeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+|||||+|| .++|... ..+++.+...++.||+.||+||| ..+|||||||
T Consensus 269 lVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLK 319 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLK 319 (689)
T ss_dssp EEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCS
T ss_pred EEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCc
Confidence 999999999 8888743 34899999999999999999999 8999999997
No 159
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.62 E-value=3.1e-16 Score=163.41 Aligned_cols=115 Identities=19% Similarity=0.287 Sum_probs=99.2
Q ss_pred HhhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC-------CCCCCcceeecccc
Q 007553 481 ATEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN-------SHTDNDDSSDEHLA 551 (599)
Q Consensus 481 at~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n-------~~~~~~~lv~e~~~ 551 (599)
..++|...+.||+|+||.||+|...+++.||||+++.......+|.+|+.+ .++||| ...+..++|||||+
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~ 265 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA 265 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecC
Confidence 455677788899999999999999888999999998765556789999998 999999 45678899999999
Q ss_pred cc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 552 NN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 552 ~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+| .++++... ...+++.+++.|+.|||+||+||| ..+|+||||+
T Consensus 266 ~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlk 311 (454)
T 1qcf_A 266 KGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLR 311 (454)
T ss_dssp TCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCS
T ss_pred CCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCC
Confidence 99 88887432 224789999999999999999999 7899999996
No 160
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=4.1e-15 Score=133.80 Aligned_cols=128 Identities=27% Similarity=0.282 Sum_probs=58.3
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecc
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLN 126 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n 126 (599)
+.++++++.++ .+|..+ .++|++|++++|.+++..+..|.++++|++|++++|++.+..+..|..+++|++|++++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 44455555544 233222 244555555555554433344445555555555555554433333444455555555555
Q ss_pred cccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccccccc
Q 007553 127 QLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLV 177 (599)
Q Consensus 127 ~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~ 177 (599)
.+++..+..+.++++|++|++++|.+++..+..+..+++|++|++++|.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 444443334444444444444444444333333344444444444444433
No 161
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.60 E-value=7.6e-16 Score=162.09 Aligned_cols=114 Identities=21% Similarity=0.271 Sum_probs=98.3
Q ss_pred hhhccccceecccCCceEEEEEeCC-CCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSS-GRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~-g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
..+|...+.||+|+||.||+|.... ++.||||.+........+|.+|+.+ +++||| ...+..++|||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 4567777889999999999999754 8899999998765556789999998 999999 4677889999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .++++... ...+++.+++.|+.|||+||+||| ..+|+||||+
T Consensus 299 ~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlk 345 (495)
T 1opk_A 299 TYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLA 345 (495)
T ss_dssp TTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred CCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 999 88887532 345899999999999999999999 7899999996
No 162
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.60 E-value=1.8e-16 Score=163.23 Aligned_cols=121 Identities=19% Similarity=0.150 Sum_probs=100.5
Q ss_pred cHHHHHHHhhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------C
Q 007553 474 TFEEMIQATEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------S 538 (599)
Q Consensus 474 ~~~~l~~at~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~ 538 (599)
.+.++...+++|...+.||+|+||.||+|+.. +|+.||||++...... ...+.+|+.+ .++||| .
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 45566667789999999999999999999975 5789999999653221 2347788887 889999 4
Q ss_pred CCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 539 HTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 539 ~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+.+.+++|||||++| .++++... ..+++.+...++.||+.||+||| ..+|+|||||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLK 202 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIK 202 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccC
Confidence 667789999999999 88887532 34899999999999999999999 7899999997
No 163
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.60 E-value=6e-16 Score=161.06 Aligned_cols=114 Identities=18% Similarity=0.259 Sum_probs=97.6
Q ss_pred hhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC-------CCCCCcceeeccccc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN-------SHTDNDDSSDEHLAN 552 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n-------~~~~~~~lv~e~~~~ 552 (599)
.++|.....||+|+||.||+|...++..||||++........+|.+|+.+ +++||| ...+..++|||||++
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~ 262 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK 262 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcC
Confidence 45677778899999999999999877889999998755456789999998 999999 345778999999999
Q ss_pred c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 553 N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 553 G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
| .++++... ...+++.+++.|+.|||+||+||| ..+|+||||+
T Consensus 263 gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlk 307 (452)
T 1fmk_A 263 GSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 307 (452)
T ss_dssp CBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred CCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCC
Confidence 9 88887421 234899999999999999999999 7899999996
No 164
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=8.1e-15 Score=131.84 Aligned_cols=133 Identities=27% Similarity=0.284 Sum_probs=115.0
Q ss_pred CcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEee
Q 007553 21 LVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQ 100 (599)
Q Consensus 21 L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 100 (599)
.+.+++.+ +.+. .+|..+ .++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|.++++|++|+++
T Consensus 9 ~~~l~~~~-~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNS-KGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCS-SCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecC-CCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 47788887 7765 456444 3789999999999997777778999999999999999997777778999999999999
Q ss_pred cCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCc
Q 007553 101 GNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIP 157 (599)
Q Consensus 101 ~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~ 157 (599)
+|++++..+..+..+++|++|++++|.+++..+..+..+++|++|++++|.+.+..+
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999998777778999999999999999997777778899999999999999886544
No 165
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.60 E-value=1e-15 Score=151.35 Aligned_cols=112 Identities=19% Similarity=0.277 Sum_probs=95.9
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh-hHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE-ELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
++|...+.||+|+||.||+|.. .+|+.||+|++...... ...|.+|+.+ +++||| ...+..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 4577778899999999999996 46899999998665433 5679999998 999999 4567789999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++.... ..++|.++..|+.||++||+||| ..+|+||||+
T Consensus 90 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlk 135 (310)
T 3s95_A 90 KGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLN 135 (310)
T ss_dssp TTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred CCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCC
Confidence 999 88887532 35899999999999999999999 7899999996
No 166
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.60 E-value=1e-15 Score=152.13 Aligned_cols=112 Identities=17% Similarity=0.175 Sum_probs=92.0
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CC----CCCcceeec
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SH----TDNDDSSDE 548 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~----~~~~~lv~e 548 (599)
++|...+.||+|+||.||+|+.. ++.||||++.........+..|+.+ +++||| .. ....++|||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e 102 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA 102 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence 45777788999999999999975 8999999997665555667778877 999999 11 233699999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCC-------CccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRK-------YRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~-------~~~i~Hrdl~ 599 (599)
|+++| .++++.+ .++|.++..|+.||++||+|||+.+ .++|+||||+
T Consensus 103 ~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlk 158 (322)
T 3soc_A 103 FHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK 158 (322)
T ss_dssp CCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCS
T ss_pred cCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCC
Confidence 99999 8888753 3899999999999999999999431 2399999996
No 167
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.60 E-value=4.9e-16 Score=157.93 Aligned_cols=113 Identities=19% Similarity=0.314 Sum_probs=95.6
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
.++|...+.||+|+||.||+|... +|+.||||.+...... ..+|.+|+.+ +++||| ...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 456777788999999999999975 7899999998754322 3568889988 999999 46678899999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||++| .++++... ..+++.++..++.|||+||+||| ..+|+||||+
T Consensus 193 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlk 240 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLA 240 (377)
T ss_dssp CCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred cCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccC
Confidence 99999 88887432 34899999999999999999999 7899999996
No 168
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.60 E-value=1.8e-15 Score=149.19 Aligned_cols=115 Identities=18% Similarity=0.223 Sum_probs=95.8
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC------CCCCCcceeecccccc-
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN------SHTDNDDSSDEHLANN- 553 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n------~~~~~~~lv~e~~~~G- 553 (599)
++|...+.||+|+||.||+|... ++.||||++... .....|.+|+.+ +++||| ...+..++||||+++|
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~ 85 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGS 85 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCB
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCC
Confidence 45666788999999999999984 889999999653 235678899988 999999 3446689999999999
Q ss_pred -cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 554 -EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 554 -~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+++........+++.+.+.++.||++||+|||+....+|+||||+
T Consensus 86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlk 132 (307)
T 2eva_A 86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132 (307)
T ss_dssp HHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCS
T ss_pred HHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCC
Confidence 8888864433457899999999999999999996555899999996
No 169
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.60 E-value=1.3e-15 Score=148.48 Aligned_cols=113 Identities=18% Similarity=0.232 Sum_probs=95.0
Q ss_pred hhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCCCcceeecccc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTDNDDSSDEHLA 551 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~~ 551 (599)
.++|...+.||+|+||.||+|...++..||||++........++.+|+.+ .++||| ...+..++||||++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 44677778899999999999999888899999998765556779999998 999999 46677899999999
Q ss_pred cc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 552 NN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 552 ~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 103 ~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dik 147 (283)
T 3gen_A 103 NGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147 (283)
T ss_dssp TCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCS
T ss_pred CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCc
Confidence 99 88887532 34899999999999999999999 7899999996
No 170
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.59 E-value=9.1e-14 Score=142.00 Aligned_cols=312 Identities=10% Similarity=-0.008 Sum_probs=223.6
Q ss_pred cccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCc
Q 007553 38 SETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTN 117 (599)
Q Consensus 38 ~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~ 117 (599)
.+|.+|.+|+.+.+..+ ++..-..+|.++++|+.+++.++ ++.....+|.++.+|+.+.+..+ +.......|.++..
T Consensus 65 ~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCC
T ss_pred HHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccc
Confidence 34677888888888644 66566677888888888888765 55455677888888888777654 33344556666654
Q ss_pred CCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccC
Q 007553 118 LTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNR 197 (599)
Q Consensus 118 L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~ 197 (599)
++...... +......+|.++++|+.+.+.++. .......|.++++|+.+.+..+ +.......|..+..|+.+.+..
T Consensus 142 ~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 142 KEITIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp SEEECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCT
T ss_pred cccccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCC
Confidence 43333222 222345678899999999997653 3344567888999999998765 4444556788888888888776
Q ss_pred CcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCC
Q 007553 198 NNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIP 277 (599)
Q Consensus 198 n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 277 (599)
+... +...+.....|+.+.+... +.......+..+..|+.+.+..+... .....|..+..++.+.+..+.+. .
T Consensus 218 ~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~ 290 (394)
T 4fs7_A 218 SLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---E 290 (394)
T ss_dssp TCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---T
T ss_pred CceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---c
Confidence 5432 2333445567888888653 33344457888999999999877543 55667888899998888766432 3
Q ss_pred cCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCC
Q 007553 278 PTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPN 357 (599)
Q Consensus 278 ~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 357 (599)
..|..+.+|+.+.+..+ +...-..+|.+|.+|+.+++.++ ++.....+|.++.+|+.+.+..+ ++..-..+|..+.+
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 46778899999999765 55556678999999999999754 55455678899999999999877 66566778999999
Q ss_pred CCEEECCCC
Q 007553 358 VSEVDVSKN 366 (599)
Q Consensus 358 L~~L~ls~n 366 (599)
|+.+++..+
T Consensus 368 L~~i~lp~~ 376 (394)
T 4fs7_A 368 LKKVELPKR 376 (394)
T ss_dssp CCEEEEEGG
T ss_pred CCEEEECCC
Confidence 999998654
No 171
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.59 E-value=1.6e-15 Score=151.39 Aligned_cols=115 Identities=16% Similarity=0.208 Sum_probs=94.3
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------CCCC-------
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET--EELAFLETSST--DFRHYN--------SHTD------- 541 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~~~~------- 541 (599)
.++|...+.||+|+||.||+|+.. +|+.||||++..... ....+.+|+.+ +++||| ...+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356777889999999999999975 799999999975432 35678999998 999999 1111
Q ss_pred --------------------------------------------------Ccceeecccccc--cccccCCCCCCCCChH
Q 007553 542 --------------------------------------------------NDDSSDEHLANN--EHFLSAPENYERVDFS 569 (599)
Q Consensus 542 --------------------------------------------------~~~lv~e~~~~G--~~~l~~~~~~~~l~~~ 569 (599)
..++||||+++| .+++..+......+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 268999999999 8888865545567888
Q ss_pred HHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 570 PDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 570 ~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
....++.||++||+||| ..+|+||||+
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlk 191 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLK 191 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCC
Confidence 89999999999999999 7899999996
No 172
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.59 E-value=1.6e-15 Score=150.89 Aligned_cols=111 Identities=23% Similarity=0.290 Sum_probs=93.0
Q ss_pred hccccceecccCCceEEEEEeC----CCCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLS----SGRVVALKKLHRSET--EELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~----~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
+|...+.||+|+||.||+|... .+..||||.+..... ....|.+|+.+ .++||| ..++..++||
T Consensus 50 ~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 129 (325)
T 3kul_A 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVT 129 (325)
T ss_dssp GEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEE
T ss_pred HeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEe
Confidence 4555688999999999999973 345699999976432 25679999998 999999 4667789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .++++... ..+++.++..|+.||++||+||| ..+|+||||+
T Consensus 130 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlk 178 (325)
T 3kul_A 130 EYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLA 178 (325)
T ss_dssp ECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred eCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCC
Confidence 999999 88887533 34899999999999999999999 7899999996
No 173
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.59 E-value=1.7e-15 Score=153.27 Aligned_cols=115 Identities=22% Similarity=0.247 Sum_probs=94.7
Q ss_pred hhhccccceecccCCceEEEEEe--------CCCCEEEEEEecCCchh--hHHHHHHhhc--cc-cccC--------CCC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL--------SSGRVVALKKLHRSETE--ELAFLETSST--DF-RHYN--------SHT 540 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~--------~~g~~vavK~l~~~~~~--~~~f~~e~~~--~l-~H~n--------~~~ 540 (599)
.++|...+.||+|+||.||+|.. .++..||||++...... ...+.+|+.+ .+ +||| ...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 35677778899999999999985 23567999999765332 4678899988 77 8999 567
Q ss_pred CCcceeecccccc--cccccCCCC-------------CCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 541 DNDDSSDEHLANN--EHFLSAPEN-------------YERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 541 ~~~~lv~e~~~~G--~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+..++||||+++| .+++..... ...++|.+++.++.||++||+||| ..+|+||||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlk 230 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLA 230 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccc
Confidence 7899999999999 888875321 235899999999999999999999 7899999996
No 174
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.59 E-value=1.1e-15 Score=150.72 Aligned_cols=116 Identities=28% Similarity=0.332 Sum_probs=96.4
Q ss_pred HHhhhccccceecccCCceEEEEEeCCCCEEEEEEecCCch---hhHHHHHHhhc--cccccC--------CCCCCccee
Q 007553 480 QATEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSET---EELAFLETSST--DFRHYN--------SHTDNDDSS 546 (599)
Q Consensus 480 ~at~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n--------~~~~~~~lv 546 (599)
....+|.....||+|+||.||+|.. +|+.||||.+..... ...+|.+|+.+ +++||| ...+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3455677788899999999999987 589999999866432 24578899998 999999 566778999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCcc--ccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRK--SYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~--i~Hrdl~ 599 (599)
|||+++| .+++........+++.+++.++.||++||+||| ..+ |+||||+
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dik 166 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLK 166 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCC
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCC
Confidence 9999999 888875433335899999999999999999999 555 9999996
No 175
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.58 E-value=9.2e-16 Score=162.97 Aligned_cols=114 Identities=18% Similarity=0.259 Sum_probs=97.7
Q ss_pred hhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC-------CCCCCcceeeccccc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN-------SHTDNDDSSDEHLAN 552 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n-------~~~~~~~lv~e~~~~ 552 (599)
.++|.....||+|+||.||+|...++..||||++........+|.+|+.+ +++||| ...+..++|||||++
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~ 345 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK 345 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcC
Confidence 45677778899999999999999877889999998755445789999998 999999 345778999999999
Q ss_pred c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 553 N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 553 G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
| .++++... ...+++.+++.|+.|||+||+||| ..+|+||||+
T Consensus 346 gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlk 390 (535)
T 2h8h_A 346 GSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 390 (535)
T ss_dssp EEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred CcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCC
Confidence 9 88887421 234899999999999999999999 7899999996
No 176
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.58 E-value=1.2e-15 Score=147.30 Aligned_cols=112 Identities=18% Similarity=0.215 Sum_probs=96.9
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCCCcceeeccccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTDNDDSSDEHLAN 552 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~~~ 552 (599)
++|.....||+|+||.||+|...++..||||.+........++.+|+.+ +++||| ...+..++||||+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN 87 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCC
Confidence 4566678899999999999998888899999998765556778999988 999999 466778999999999
Q ss_pred c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 553 N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 553 G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
| .+++... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 88 ~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dik 131 (268)
T 3sxs_A 88 GCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLA 131 (268)
T ss_dssp CBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCS
T ss_pred CcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcC
Confidence 9 8888753 234899999999999999999999 7899999986
No 177
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.58 E-value=2.3e-15 Score=149.36 Aligned_cols=113 Identities=15% Similarity=0.129 Sum_probs=94.0
Q ss_pred hccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh--hHHHHHHhhc--cccccC----------CCCCCcceeec
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE--ELAFLETSST--DFRHYN----------SHTDNDDSSDE 548 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n----------~~~~~~~lv~e 548 (599)
.|.....||+|+||.||+|... +|+.||||++...... ...+.+|+.+ +++||| ......++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 4666788999999999999964 5899999999754322 4668889988 999999 22346789999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++........+++.++..|+.||++||+||| ..+|+||||+
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlk 139 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIK 139 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCC
Confidence 99999 888886544445899999999999999999999 7899999996
No 178
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.57 E-value=2.7e-15 Score=147.56 Aligned_cols=111 Identities=20% Similarity=0.249 Sum_probs=90.1
Q ss_pred hhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc----cccccC------------CCCCCcce
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST----DFRHYN------------SHTDNDDS 545 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~----~l~H~n------------~~~~~~~l 545 (599)
.++|...+.||+|+||.||+|.. +|+.||||++.... ...+..|.++ .++||| ......++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 34677778899999999999998 69999999996543 3345555555 489999 12345789
Q ss_pred eecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCC-----CccccccccC
Q 007553 546 SDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRK-----YRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~-----~~~i~Hrdl~ 599 (599)
||||+++| .++++.. .++|.++..|+.|||+||+|||... ..+|+||||+
T Consensus 84 v~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk 140 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140 (301)
T ss_dssp EECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCC
T ss_pred ehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCC
Confidence 99999999 8888642 4899999999999999999999543 7899999996
No 179
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.57 E-value=2.6e-15 Score=148.30 Aligned_cols=112 Identities=21% Similarity=0.243 Sum_probs=92.9
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCchh---hHHHHHHhhc--cccccC--------CCCCCcceeecc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETE---ELAFLETSST--DFRHYN--------SHTDNDDSSDEH 549 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~---~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~ 549 (599)
++|...+.||+|+||.||+|...+|+.||||++...... ...+.+|+.+ +++||| ...+..++||||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 100 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence 456667889999999999999888999999999754322 3578889988 999999 466778999999
Q ss_pred cccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 550 LANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 550 ~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++++ .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 101 ~~~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dik 146 (311)
T 3niz_A 101 MEKDLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLK 146 (311)
T ss_dssp CSEEHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred CCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCc
Confidence 9988 77776533 34899999999999999999999 7899999996
No 180
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.57 E-value=3.3e-15 Score=144.12 Aligned_cols=112 Identities=15% Similarity=0.170 Sum_probs=97.1
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCCCcceeeccccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTDNDDSSDEHLAN 552 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~~~ 552 (599)
++|...+.||+|+||.||+|...+++.||||++........++.+|+.+ .++||| ...+..++||||+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 4566678899999999999998888899999998765556778999988 999999 466788999999999
Q ss_pred c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 553 N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 553 G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 88 ~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~ 131 (267)
T 3t9t_A 88 GCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 131 (267)
T ss_dssp CBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCC
T ss_pred CcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCc
Confidence 9 88887532 34899999999999999999999 7899999986
No 181
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.57 E-value=1.6e-15 Score=148.81 Aligned_cols=112 Identities=26% Similarity=0.335 Sum_probs=93.6
Q ss_pred hhccccceecccCCceEEEEEe-----CCCCEEEEEEecCCchh-hHHHHHHhhc--cccccC----------CCCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-----SSGRVVALKKLHRSETE-ELAFLETSST--DFRHYN----------SHTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-----~~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n----------~~~~~~~ 544 (599)
++|...+.||+|+||.||+|++ .+|+.||||++...... ...|.+|+.+ +++||| ......+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4566678899999999999985 26889999999765443 4678899998 999999 1235588
Q ss_pred eeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 90 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dik 141 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLA 141 (295)
T ss_dssp EEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred EEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCC
Confidence 999999999 88887532 34899999999999999999999 7899999996
No 182
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.57 E-value=2.6e-15 Score=148.92 Aligned_cols=112 Identities=16% Similarity=0.097 Sum_probs=95.7
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCCCcceeecccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTDNDDSSDEHLA 551 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~~ 551 (599)
++|...+.||+|+||.||+|... +|+.||+|.+.........+.+|+.+ .++||| ...+..++||||++
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 84 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence 45666788999999999999964 68899999998765556678899998 999999 45678899999999
Q ss_pred cc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 552 NN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 552 ~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 85 g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlk 129 (321)
T 1tki_A 85 GLDIFERINTSA--FELNEREIVSYVHQVCEALQFLH---SHNIGHFDIR 129 (321)
T ss_dssp CCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCC
Confidence 99 78887532 35899999999999999999999 7899999996
No 183
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.57 E-value=1.8e-15 Score=152.94 Aligned_cols=124 Identities=20% Similarity=0.226 Sum_probs=99.8
Q ss_pred ccHHHHHHHhhhccccceecccCCceEEEEEe------CCCCEEEEEEecCCchh--hHHHHHHhhc--cc-cccC----
Q 007553 473 ITFEEMIQATEDFHIKYCIGTGGYGSVYRAQL------SSGRVVALKKLHRSETE--ELAFLETSST--DF-RHYN---- 537 (599)
Q Consensus 473 ~~~~~l~~at~~~~~~~~lg~g~~g~v~~~~~------~~g~~vavK~l~~~~~~--~~~f~~e~~~--~l-~H~n---- 537 (599)
+...++....++|.....||+|+||.||+|.. .+++.||||++...... ...|.+|+++ ++ +|||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44566666778898889999999999999973 34678999999764332 4578999998 77 8899
Q ss_pred -----CCCCCcceeecccccc--cccccCCCC------------------------------------------------
Q 007553 538 -----SHTDNDDSSDEHLANN--EHFLSAPEN------------------------------------------------ 562 (599)
Q Consensus 538 -----~~~~~~~lv~e~~~~G--~~~l~~~~~------------------------------------------------ 562 (599)
..+...++||||+++| .++++.+..
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 2345589999999999 888875321
Q ss_pred ---------------CCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 563 ---------------YERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 563 ---------------~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
...++|.++..++.||++||+||| ..+|+||||+
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dik 220 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLA 220 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCC
Confidence 122899999999999999999999 7899999996
No 184
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.57 E-value=5.7e-15 Score=142.79 Aligned_cols=114 Identities=15% Similarity=0.149 Sum_probs=93.2
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC--------CC--CCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN--------SH--TDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n--------~~--~~~~~lv~ 547 (599)
++|.....||+|+||.||+|... |+.||||.+.... .....|.+|+.+ .++||| .. .+..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 35666788999999999999984 8999999997643 224679999998 999999 23 36789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++.... ...+++.++..++.||++||+|||+ ..++|+||||+
T Consensus 89 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~-~~~~i~H~dik 140 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALN 140 (271)
T ss_dssp ECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTT-SSSCCTTCCCS
T ss_pred cccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCc
Confidence 999999 88888532 3358999999999999999999992 23349999986
No 185
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.57 E-value=3.2e-15 Score=151.25 Aligned_cols=114 Identities=23% Similarity=0.275 Sum_probs=94.3
Q ss_pred hhccccceecccCCceEEEEEeC------CCCEEEEEEecCCc--hhhHHHHHHhhc--cccccC--------CCCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS------SGRVVALKKLHRSE--TEELAFLETSST--DFRHYN--------SHTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~------~g~~vavK~l~~~~--~~~~~f~~e~~~--~l~H~n--------~~~~~~~ 544 (599)
++|...+.||+|+||.||+|.+. +++.||||++.... .....+.+|+.+ +++||| ...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 45677788999999999999953 45689999996543 224578889988 899999 4677789
Q ss_pred eeecccccc--cccccCCC----CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPE----NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~----~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++| .+++.... ....++|.+++.++.||++||+||| ..+|+|||||
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlk 208 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIA 208 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCC
Confidence 999999999 88887532 2245899999999999999999999 7899999997
No 186
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=3.6e-15 Score=133.95 Aligned_cols=131 Identities=24% Similarity=0.252 Sum_probs=73.2
Q ss_pred cCCCCCCCEEEcccCcCcccCCcCCCCC-CCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcC
Q 007553 40 TGALSRLKVLDLSYNRLTGTIPSEIGSL-RDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNL 118 (599)
Q Consensus 40 ~~~~~~L~~L~l~~n~~~~~~~~~~~~l-~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L 118 (599)
+.++++|++|++++|.++ .+|. +..+ ++|++|++++|.+++. ..|..+++|++|++++|++.+..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 345566666666666665 3343 3333 3666666666666643 355666666666666666664433334566666
Q ss_pred CEEeeecccccccCCc--cccCCCcccEEecccCccCCCCccc----ccCCCCCCeeecccccc
Q 007553 119 THLDLSLNQLSGRLPQ--EVGNLKNLVSLFLDNNNLTGPIPST----LYHLNQLSTLYLAYNNL 176 (599)
Q Consensus 119 ~~L~l~~n~i~~~~~~--~l~~l~~L~~L~l~~n~i~~~~~~~----l~~l~~L~~L~l~~n~~ 176 (599)
++|++++|.+.. +|. .+..+++|++|++++|.++. +|.. +..+++|+.|+++.|..
T Consensus 91 ~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 91 TELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred CEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 666666666642 332 45556666666666666553 2332 45555555555555544
No 187
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.56 E-value=2.9e-15 Score=155.85 Aligned_cols=112 Identities=19% Similarity=0.227 Sum_probs=94.6
Q ss_pred hhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC---------CCCCCcceeeccc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN---------SHTDNDDSSDEHL 550 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n---------~~~~~~~lv~e~~ 550 (599)
.++|...+.||+|+||.||+|... |+.||||.++... ....|.+|+.+ +++||| ...+..++|||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 456777788999999999999985 8899999997643 45679999998 999999 2334689999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .++++.+. ...+++.+++.|+.|||+||+||| ..+|+||||+
T Consensus 270 ~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlk 316 (450)
T 1k9a_A 270 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLA 316 (450)
T ss_dssp TTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCC
Confidence 999 88888532 334799999999999999999999 7899999996
No 188
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.56 E-value=9.2e-16 Score=156.84 Aligned_cols=122 Identities=16% Similarity=0.140 Sum_probs=100.1
Q ss_pred ccHHHHHHHhhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch----hhHHHHHHhhc--cccccC--------
Q 007553 473 ITFEEMIQATEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET----EELAFLETSST--DFRHYN-------- 537 (599)
Q Consensus 473 ~~~~~l~~at~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~----~~~~f~~e~~~--~l~H~n-------- 537 (599)
+.+++.....++|...+.||+|+||.||+++. .+|+.||||++..... +...+.+|+.+ .++|||
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 34555556678899899999999999999997 4699999999965321 12347778877 889999
Q ss_pred CCCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 538 SHTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 538 ~~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+.+.+++|||||++| .+++.... ..+++..+..++.||+.||+||| ..+|+|||||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLK 189 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIK 189 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccC
Confidence 4667789999999999 88887432 34899999999999999999999 7899999996
No 189
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.56 E-value=2.4e-15 Score=149.47 Aligned_cols=112 Identities=18% Similarity=0.162 Sum_probs=94.8
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
.++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+ .++||| ...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 34677788899999999999996 579999999996542 224568889988 999999 4667789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++..+ ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 94 e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlk 141 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLK 141 (328)
T ss_dssp CCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred ECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCC
Confidence 999999 7888643 24899999999999999999999 7899999996
No 190
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.56 E-value=4.8e-15 Score=148.71 Aligned_cols=117 Identities=21% Similarity=0.257 Sum_probs=97.0
Q ss_pred HHhhhccccceecccCCceEEEEEeC------CCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------CCCC
Q 007553 480 QATEDFHIKYCIGTGGYGSVYRAQLS------SGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------SHTD 541 (599)
Q Consensus 480 ~at~~~~~~~~lg~g~~g~v~~~~~~------~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~~~~ 541 (599)
...++|...+.||+|+||.||+|... +++.||||.+...... ...|.+|+.+ +++||| ...+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34567877889999999999999963 3478999999765322 4678999998 999999 4677
Q ss_pred Ccceeecccccc--cccccCCCC---------------------CCCCChHHHHHHHHHHHHHHhhhhCCCCcccccccc
Q 007553 542 NDDSSDEHLANN--EHFLSAPEN---------------------YERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRL 598 (599)
Q Consensus 542 ~~~lv~e~~~~G--~~~l~~~~~---------------------~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl 598 (599)
..++||||+++| .+++..... ...+++.+++.|+.||++||+||| ..+|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 889999999999 888865321 246899999999999999999999 789999999
Q ss_pred C
Q 007553 599 Y 599 (599)
Q Consensus 599 ~ 599 (599)
+
T Consensus 201 k 201 (343)
T 1luf_A 201 A 201 (343)
T ss_dssp S
T ss_pred C
Confidence 6
No 191
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.56 E-value=4.7e-15 Score=144.86 Aligned_cols=111 Identities=25% Similarity=0.290 Sum_probs=94.1
Q ss_pred hccccceecccCCceEEEEEeCCCCEEEEEEecCCchh---hHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETE---ELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~---~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
+|...+.||+|+||.||+|...+|+.||||++...... ...+.+|+.+ +++||| ...+..++||||+
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (288)
T 1ob3_A 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL 82 (288)
T ss_dssp SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred cchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEec
Confidence 45666789999999999999878999999999654332 3678899998 999999 4567889999999
Q ss_pred ccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+++ .+++.... ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 83 ~~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlk 127 (288)
T 1ob3_A 83 DQDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLK 127 (288)
T ss_dssp SEEHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred CCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCC
Confidence 988 77777533 34899999999999999999999 7899999996
No 192
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.56 E-value=2.8e-15 Score=147.01 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=93.6
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh-hHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE-ELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
+.|...+.||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ .++||| ..++..++||||+
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 99 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECC
Confidence 4566778899999999999984 57999999998654332 4568889888 999999 4567889999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++... .+++.+...++.||+.||+||| ..+|+||||+
T Consensus 100 ~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlk 143 (297)
T 3fxz_A 100 AGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIK 143 (297)
T ss_dssp TTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred CCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCC
Confidence 999 8888753 3899999999999999999999 7799999996
No 193
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.56 E-value=4.7e-15 Score=151.72 Aligned_cols=113 Identities=15% Similarity=0.129 Sum_probs=94.0
Q ss_pred hccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh--hHHHHHHhhc--cccccC----------CCCCCcceeec
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE--ELAFLETSST--DFRHYN----------SHTDNDDSSDE 548 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n----------~~~~~~~lv~e 548 (599)
.|...+.||+|+||.||+|... +|+.||||++...... ...+.+|+++ +++||| ......++|||
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 4666788999999999999964 5899999999754322 4668889988 999999 12346799999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++........+++.++..++.||+.||+||| ..+|+||||+
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlk 139 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIK 139 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcC
Confidence 99999 888886544445899999999999999999999 7899999996
No 194
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.56 E-value=3.7e-15 Score=150.90 Aligned_cols=113 Identities=10% Similarity=0.020 Sum_probs=89.8
Q ss_pred hhhccccceecccCCceEEEEE------eCCCCEEEEEEecCCchhhHHHHHHhhc--cc---cccC--------CCCCC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQ------LSSGRVVALKKLHRSETEELAFLETSST--DF---RHYN--------SHTDN 542 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~------~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l---~H~n--------~~~~~ 542 (599)
.++|...+.||+|+||.||+|. ..+++.||||++.... ..++..|+.+ .+ .|+| ...+.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 4567777889999999999994 4568899999997653 3345566655 34 4888 46778
Q ss_pred cceeecccccc--cccccCC--CCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN--EHFLSAP--ENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G--~~~l~~~--~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++|||||++| .+++... .....++|.+++.|+.||++||+||| ..+|+|||||
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiK 199 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIK 199 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCS
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCC
Confidence 89999999999 8888642 12356999999999999999999999 7899999997
No 195
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.55 E-value=2.5e-15 Score=150.21 Aligned_cols=112 Identities=15% Similarity=0.166 Sum_probs=94.5
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET--EELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+ .++||| ...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 35677778899999999999985 5799999999976532 24568889988 999999 46677899999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 89 ~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlk 135 (347)
T 3zgw_A 89 YCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLK 135 (347)
T ss_dssp CCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCC
T ss_pred CCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCcc
Confidence 99999 7888642 24899999999999999999999 7899999996
No 196
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.55 E-value=1.4e-15 Score=155.39 Aligned_cols=118 Identities=14% Similarity=0.094 Sum_probs=97.4
Q ss_pred HHHHHHHhhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch----hhHHHHHHhhc--cccccC--------CC
Q 007553 475 FEEMIQATEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET----EELAFLETSST--DFRHYN--------SH 539 (599)
Q Consensus 475 ~~~l~~at~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~----~~~~f~~e~~~--~l~H~n--------~~ 539 (599)
+.++....++|...+.||+|+||.||+|+.. +|+.||+|++..... ....+.+|+.+ .++||| .+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556778988899999999999999964 589999999965321 12347788887 899999 46
Q ss_pred CCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 540 TDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 540 ~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+..++|||||++| .++++.. .+++.....++.||+.||+||| ..+|+|||||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLK 195 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVK 195 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCC
Confidence 67789999999999 7788743 3889999999999999999999 7899999996
No 197
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.55 E-value=5e-15 Score=147.03 Aligned_cols=111 Identities=15% Similarity=0.061 Sum_probs=91.9
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------CCCCCcceeecc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------SHTDNDDSSDEH 549 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~ 549 (599)
++|...+.||+|+||.||+|... +|+.||||.+...... ...+.+|+.+ .++||| ..++..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 45777788999999999999864 7899999998654332 3567888888 899999 456778999999
Q ss_pred cccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 550 LANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 550 ~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+++| .+++... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 87 ~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlk 132 (323)
T 3tki_A 87 CSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIK 132 (323)
T ss_dssp CTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred CCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccc
Confidence 9999 8888742 35899999999999999999999 7899999996
No 198
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.55 E-value=3.2e-15 Score=145.28 Aligned_cols=114 Identities=20% Similarity=0.301 Sum_probs=96.9
Q ss_pred hhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC-------CCCCCcceeeccccc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN-------SHTDNDDSSDEHLAN 552 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n-------~~~~~~~lv~e~~~~ 552 (599)
.++|.....||+|+||.||+|...++..||||.+.........|.+|+.+ .++||| ...+..++||||+++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 91 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMEN 91 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTT
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCC
Confidence 34567778899999999999998888899999997765556778999988 999999 456678999999999
Q ss_pred c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 553 N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 553 G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
| .+++.... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 92 ~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dik 136 (279)
T 1qpc_A 92 GSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136 (279)
T ss_dssp CBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred CCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCC
Confidence 9 88887421 124899999999999999999999 7899999986
No 199
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.55 E-value=3.7e-15 Score=150.32 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=95.1
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCCCcceeecccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTDNDDSSDEHLA 551 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~~ 551 (599)
+.|...+.||+|+||.||++... +|+.||||++.........+.+|+.+ .++||| ...+..++||||++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 35677788999999999999964 78999999998765555678889988 999999 46677899999999
Q ss_pred cc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 552 NN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 552 ~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+| .+++... ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 100 ~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlk 143 (361)
T 3uc3_A 100 GGELYERICNA---GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLK 143 (361)
T ss_dssp SCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCC
T ss_pred CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCC
Confidence 99 7777642 24899999999999999999999 7899999996
No 200
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.55 E-value=7.7e-15 Score=144.08 Aligned_cols=110 Identities=18% Similarity=0.168 Sum_probs=87.7
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh---------------------------hHHHHHHhhc--c
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE---------------------------ELAFLETSST--D 532 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~---------------------------~~~f~~e~~~--~ 532 (599)
++|...+.||+|+||.||+|.. .+|+.||||.+...... ...+.+|+.+ +
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 4577778899999999999985 46899999998654211 2458889988 9
Q ss_pred ccccC----------CCCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 533 FRHYN----------SHTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 533 l~H~n----------~~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++||| ...+..++||||+++| .+++.. ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlk 164 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIK 164 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCC
Confidence 99999 1256689999999999 665543 35899999999999999999999 7799999996
No 201
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.54 E-value=3.6e-15 Score=151.02 Aligned_cols=109 Identities=13% Similarity=0.083 Sum_probs=87.3
Q ss_pred cccceecccCCceEEEEEe-CCCCEEEEEEecCCch-hhHHHHHHhhc--cccccC--------CCCCCcceeecccccc
Q 007553 486 HIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET-EELAFLETSST--DFRHYN--------SHTDNDDSSDEHLANN 553 (599)
Q Consensus 486 ~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~-~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~~~G 553 (599)
...+.||+|+||.||+|.. .+|+.||||++..... ...+|.+|+.+ +++||| ...+..++||||+++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3356799999999999985 5699999999987543 35678999998 999999 4567789999999999
Q ss_pred --cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 554 --EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 554 --~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 172 ~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlk 214 (373)
T 2x4f_A 172 ELFDRIIDES--YNLTELDTILFMKQICEGIRHMH---QMYILHLDLK 214 (373)
T ss_dssp EEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred cHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCC
Confidence 77776432 34899999999999999999999 7899999996
No 202
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.54 E-value=2.5e-15 Score=150.17 Aligned_cols=117 Identities=19% Similarity=0.237 Sum_probs=94.6
Q ss_pred HHhhhccccceecccCCceEEEEEeC-CC-----CEEEEEEecCCch--hhHHHHHHhhc--cc-cccC--------CCC
Q 007553 480 QATEDFHIKYCIGTGGYGSVYRAQLS-SG-----RVVALKKLHRSET--EELAFLETSST--DF-RHYN--------SHT 540 (599)
Q Consensus 480 ~at~~~~~~~~lg~g~~g~v~~~~~~-~g-----~~vavK~l~~~~~--~~~~f~~e~~~--~l-~H~n--------~~~ 540 (599)
...++|...+.||+|+||.||+|... .+ ..||||.+..... ....+.+|+.+ .+ +||| ...
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 34567777889999999999999863 22 4799999976532 24678899988 88 8999 567
Q ss_pred CCcceeecccccc--cccccCCC-----------CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 541 DNDDSSDEHLANN--EHFLSAPE-----------NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 541 ~~~~lv~e~~~~G--~~~l~~~~-----------~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+..++||||+++| .+++.... ....+++.++..++.||++||+||| ..+|+||||+
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlk 191 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVA 191 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcc
Confidence 7899999999999 88886421 1235799999999999999999999 7799999996
No 203
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.54 E-value=4.8e-15 Score=144.32 Aligned_cols=108 Identities=7% Similarity=-0.085 Sum_probs=89.8
Q ss_pred hccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
.|.....||+|+||.||+|... +|+.||||.+...... ...|.+|+.. +++||| ...+..++|||
T Consensus 32 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 111 (286)
T 3uqc_A 32 RYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAE 111 (286)
T ss_dssp TEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEE
Confidence 4666778999999999999964 5899999999765322 3678888887 999999 35677899999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++... ....+..+|+.||++||+||| ..+|+|||||
T Consensus 112 ~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH---~~givH~Dik 156 (286)
T 3uqc_A 112 WIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAH---RAGVALSIDH 156 (286)
T ss_dssp CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCS
T ss_pred ecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHH---HCCCccCCCC
Confidence 99999 8888631 355678999999999999999 7899999996
No 204
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=1e-14 Score=130.99 Aligned_cols=135 Identities=20% Similarity=0.171 Sum_probs=114.9
Q ss_pred ccccCCCCCcEEeeCCCCCCeecCCcccCCC-CCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCC
Q 007553 13 LNFTCFPNLVTFRIWGTRFLSGRIPSETGAL-SRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNL 91 (599)
Q Consensus 13 ~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~-~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l 91 (599)
..+..+++|++|++++ |.++ .+|. +..+ ++|++|++++|.+++. ..+..+++|++|++++|.+++..+..|..+
T Consensus 13 ~~~~~~~~L~~L~l~~-n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 87 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRG-YKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQAL 87 (176)
T ss_dssp CEEECTTSCEEEECTT-SCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHC
T ss_pred HhcCCcCCceEEEeeC-CCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcC
Confidence 3477899999999999 8887 4554 5454 4999999999999965 579999999999999999997655666899
Q ss_pred CCCcEEEeecCcCCccCCc--cccCCCcCCEEeeecccccccCCc----cccCCCcccEEecccCccCC
Q 007553 92 KDLYDLRLQGNKLDGLIPS--SIGNLTNLTHLDLSLNQLSGRLPQ----EVGNLKNLVSLFLDNNNLTG 154 (599)
Q Consensus 92 ~~L~~L~L~~n~~~~~~~~--~~~~l~~L~~L~l~~n~i~~~~~~----~l~~l~~L~~L~l~~n~i~~ 154 (599)
++|++|++++|++.. +|. .+..+++|++|++++|.+.. .|. .+..+++|+.|+++.|.+..
T Consensus 88 ~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 88 PDLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp TTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999999999999974 454 78999999999999999984 455 48899999999999997653
No 205
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.54 E-value=9.3e-15 Score=148.38 Aligned_cols=112 Identities=16% Similarity=0.160 Sum_probs=95.3
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch-hhHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET-EELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~-~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
+.|...+.||+|+||.||+|.. .+|+.||+|.+..... ....+.+|+.+ .++||| ...+..++||||+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 4577778899999999999986 4689999999976543 34578899998 999999 4667789999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 131 ~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlk 176 (387)
T 1kob_A 131 SGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIK 176 (387)
T ss_dssp CCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred CCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccc
Confidence 999 7888743 235899999999999999999999 7899999996
No 206
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.54 E-value=4.1e-15 Score=148.23 Aligned_cols=111 Identities=20% Similarity=0.171 Sum_probs=93.2
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCc----hhhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSE----TEELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~----~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|...+.||+|+||.||+|... +|+.||+|.+.... .+...+.+|+.+ .++||| ...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 56777889999999999999964 69999999996532 124567888887 999999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++... ..+++.+...++.||+.||+||| ..+|+||||+
T Consensus 85 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlk 132 (337)
T 1o6l_A 85 EYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIK 132 (337)
T ss_dssp ECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCC
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCC
Confidence 999999 7777642 24899999999999999999999 7899999996
No 207
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.54 E-value=7.7e-15 Score=147.61 Aligned_cols=111 Identities=18% Similarity=0.147 Sum_probs=93.8
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch-------hhHHHHHHhhc--cccccC--------CCCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET-------EELAFLETSST--DFRHYN--------SHTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~-------~~~~f~~e~~~--~l~H~n--------~~~~~~~ 544 (599)
+.|.....||+|+||.||+|... +|+.||||.+..... ....+.+|+.+ .++||| ...+..+
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 44666788999999999999964 689999999975432 13578899998 999999 4567789
Q ss_pred eeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++| .+++..+ ..+++.+...++.||+.||+||| ..+|+||||+
T Consensus 92 lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlk 142 (361)
T 2yab_A 92 LILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLK 142 (361)
T ss_dssp EEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred EEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCC
Confidence 999999999 8888742 35899999999999999999999 7899999996
No 208
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.54 E-value=1.1e-14 Score=141.79 Aligned_cols=112 Identities=20% Similarity=0.249 Sum_probs=93.2
Q ss_pred hhccccceecccCCceEEEEEeC----CCCEEEEEEecCCchh--hHHHHHHhhc--cccccC-------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS----SGRVVALKKLHRSETE--ELAFLETSST--DFRHYN-------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~----~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n-------~~~~~~~lv~ 547 (599)
++|...+.||+|+||.||+|... .+..||||++...... ...|.+|+.+ +++||| ...+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv~ 94 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM 94 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEEE
Confidence 45667788999999999999863 2457999998764322 4678899988 999999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++..+. ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 95 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlk 143 (281)
T 1mp8_A 95 ELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIA 143 (281)
T ss_dssp ECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred ecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccc
Confidence 999999 88887532 34899999999999999999999 7899999996
No 209
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.53 E-value=6e-15 Score=144.37 Aligned_cols=111 Identities=20% Similarity=0.246 Sum_probs=92.3
Q ss_pred hccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh---hHHHHHHhhc--cccccC--------CCCCCcceeecc
Q 007553 484 DFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE---ELAFLETSST--DFRHYN--------SHTDNDDSSDEH 549 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~---~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~ 549 (599)
+|...+.||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ +++||| ..++..++||||
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 82 (292)
T 3o0g_A 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_dssp SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEec
Confidence 466677899999999999996 46899999999754322 4678889988 999999 466778999999
Q ss_pred cccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 550 LANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 550 ~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++++ .+++... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 83 ~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dik 128 (292)
T 3o0g_A 83 CDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLK 128 (292)
T ss_dssp CSEEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred CCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 9988 6666542 234899999999999999999999 7799999996
No 210
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=5.3e-17 Score=149.10 Aligned_cols=151 Identities=27% Similarity=0.310 Sum_probs=83.2
Q ss_pred CCCCEEEcccCcCcccCCc------CCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCc
Q 007553 44 SRLKVLDLSYNRLTGTIPS------EIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTN 117 (599)
Q Consensus 44 ~~L~~L~l~~n~~~~~~~~------~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~ 117 (599)
..++.++++.+.+++.+|. .+..+++|++|++++|.+++ +| .+.++++|++|++++|++. .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3444444444444444443 45555666666666666553 44 5555666666666666655 34445555566
Q ss_pred CCEEeeecccccccCCccccCCCcccEEecccCccCCCCc-ccccCCCCCCeeecccccccccCcc----------ccCC
Q 007553 118 LTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIP-STLYHLNQLSTLYLAYNNLVGPLPK----------EVGN 186 (599)
Q Consensus 118 L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~l~~n~~~~~~~~----------~l~~ 186 (599)
|++|++++|.+++ +| .+.++++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..|. .+..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 6666666666654 22 35556666666666666654221 3455666666666666666544332 2566
Q ss_pred CCCCCEEEccCCccc
Q 007553 187 LKNLDSLLLNRNNLT 201 (599)
Q Consensus 187 l~~L~~L~l~~n~~~ 201 (599)
+++|+.|+ ++.++
T Consensus 173 l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 173 LPNLKKLD--GMPVD 185 (198)
T ss_dssp CSSCSEEC--CGGGT
T ss_pred CCCcEEEC--CcccC
Confidence 67777665 44443
No 211
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=6.7e-17 Score=148.40 Aligned_cols=150 Identities=25% Similarity=0.280 Sum_probs=93.9
Q ss_pred ccCCCCCcEEeeCCCCCCeecCCc------ccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccC
Q 007553 15 FTCFPNLVTFRIWGTRFLSGRIPS------ETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEF 88 (599)
Q Consensus 15 l~~l~~L~~L~l~~~~~~~~~~~~------~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~ 88 (599)
+...+.++.+++.. +.+.+.+|. .+..+++|++|++++|.+++ +| .+..+++|++|++++|.++ .+|..+
T Consensus 14 ~~~~~~l~~l~l~~-~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEK-VELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSE-EECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHhcccccCcchhe-eEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchh
Confidence 34455556666665 555555554 56666777777777777664 45 5666677777777777666 455555
Q ss_pred CCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCC-ccccCCCcccEEecccCccCCCCcc---------
Q 007553 89 GNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLP-QEVGNLKNLVSLFLDNNNLTGPIPS--------- 158 (599)
Q Consensus 89 ~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~l~~n~i~~~~~~--------- 158 (599)
..+++|++|++++|++.+. | .+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+.+.+|.
T Consensus 90 ~~~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 167 (198)
T 1ds9_A 90 AVADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRI 167 (198)
T ss_dssp HHHHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHH
T ss_pred hcCCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHH
Confidence 5566777777777776642 3 46666777777777776664322 3566677777777777766554433
Q ss_pred -cccCCCCCCeee
Q 007553 159 -TLYHLNQLSTLY 170 (599)
Q Consensus 159 -~l~~l~~L~~L~ 170 (599)
.+..+++|+.|+
T Consensus 168 ~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 168 EVVKRLPNLKKLD 180 (198)
T ss_dssp HHHHHCSSCSEEC
T ss_pred HHHHhCCCcEEEC
Confidence 255666666665
No 212
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.53 E-value=1.1e-14 Score=147.47 Aligned_cols=110 Identities=26% Similarity=0.335 Sum_probs=89.8
Q ss_pred ccccceecccCCceEEEEEeC--CC--CEEEEEEecCCc--hhhHHHHHHhhc--cccccC---------CCCCCcceee
Q 007553 485 FHIKYCIGTGGYGSVYRAQLS--SG--RVVALKKLHRSE--TEELAFLETSST--DFRHYN---------SHTDNDDSSD 547 (599)
Q Consensus 485 ~~~~~~lg~g~~g~v~~~~~~--~g--~~vavK~l~~~~--~~~~~f~~e~~~--~l~H~n---------~~~~~~~lv~ 547 (599)
|...+.||+|+||.||+|... ++ ..||||.+.... ....+|.+|+.+ +++||| ...+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 444567999999999999863 22 468999986543 235679999998 999999 2345678999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .++++... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 171 e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlk 219 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLA 219 (373)
T ss_dssp ECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred ECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccc
Confidence 999999 88887533 34899999999999999999999 7899999996
No 213
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.53 E-value=3.2e-15 Score=145.99 Aligned_cols=115 Identities=22% Similarity=0.269 Sum_probs=98.5
Q ss_pred HhhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCCCcceeecc
Q 007553 481 ATEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTDNDDSSDEH 549 (599)
Q Consensus 481 at~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~ 549 (599)
...+|.....||+|+||.||+|... ++..||||.+.........+.+|+.+ .++||| ...+..++||||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 3556777788999999999999975 48899999998766666789999998 999999 466778999999
Q ss_pred cccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 550 LANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 550 ~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+++| .+++... ....+++.++..++.||++||+||| ..+|+||||+
T Consensus 91 ~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dik 138 (288)
T 3kfa_A 91 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLA 138 (288)
T ss_dssp CTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCS
T ss_pred CCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCC
Confidence 9999 8888753 2345899999999999999999999 7899999986
No 214
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.53 E-value=7.6e-15 Score=143.42 Aligned_cols=112 Identities=17% Similarity=0.289 Sum_probs=93.3
Q ss_pred hhccccceecccCCceEEEEEeC-CC-------CEEEEEEecCCchh-hHHHHHHhhc--cccccC--------CCCCCc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SG-------RVVALKKLHRSETE-ELAFLETSST--DFRHYN--------SHTDND 543 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g-------~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n--------~~~~~~ 543 (599)
++|...+.||+|+||.||+|... ++ ..||+|.+...... ...|.+|+.+ .++||| ...+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 45666788999999999999853 23 47999999765433 5678899988 999999 467788
Q ss_pred ceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 544 DSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++||||+++| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlk 140 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVC 140 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred EEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcC
Confidence 9999999999 88887532 34899999999999999999999 7899999996
No 215
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.53 E-value=1e-14 Score=147.16 Aligned_cols=112 Identities=13% Similarity=0.094 Sum_probs=94.8
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
.++|...+.||+|+||.||+|.. .+|+.||||.+.... .....+.+|+.+ .++||| ...+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 45688888999999999999986 468999999997543 224568889998 899999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++..+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 108 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlk 155 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCH---SNGIVHRNLK 155 (362)
T ss_dssp CCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCS
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCc
Confidence 999999 7777642 35899999999999999999999 7799999996
No 216
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.53 E-value=1e-14 Score=146.33 Aligned_cols=116 Identities=20% Similarity=0.272 Sum_probs=93.5
Q ss_pred HhhhccccceecccCCceEEEEEe------CCCCEEEEEEecCCch--hhHHHHHHhhc--cc-cccC--------CCCC
Q 007553 481 ATEDFHIKYCIGTGGYGSVYRAQL------SSGRVVALKKLHRSET--EELAFLETSST--DF-RHYN--------SHTD 541 (599)
Q Consensus 481 at~~~~~~~~lg~g~~g~v~~~~~------~~g~~vavK~l~~~~~--~~~~f~~e~~~--~l-~H~n--------~~~~ 541 (599)
..++|...+.||+|+||.||+|.. .+++.||||.+..... ....+.+|+.+ ++ +||| ...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 456788888999999999999985 2456899999975432 24678899988 88 9999 5677
Q ss_pred Ccceeecccccc--cccccCCCC--------------------CCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 542 NDDSSDEHLANN--EHFLSAPEN--------------------YERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 542 ~~~lv~e~~~~G--~~~l~~~~~--------------------~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..++||||+++| .+++..... ...++|.++..++.||++||+||| ..+|+||||+
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 899999999999 888875432 134899999999999999999999 7899999996
No 217
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.53 E-value=1.1e-14 Score=144.93 Aligned_cols=111 Identities=17% Similarity=0.136 Sum_probs=94.0
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch-------hhHHHHHHhhc--cccccC--------CCCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET-------EELAFLETSST--DFRHYN--------SHTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~-------~~~~f~~e~~~--~l~H~n--------~~~~~~~ 544 (599)
+.|.....||+|+||.||+|... +|+.||||.+..... ....+.+|+.+ .++||| ...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45777788999999999999964 689999999865432 14568899988 999999 4567789
Q ss_pred eeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++| .+++..+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 91 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlk 141 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLK 141 (326)
T ss_dssp EEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred EEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCC
Confidence 999999999 8888742 35899999999999999999999 7899999996
No 218
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.53 E-value=1.3e-14 Score=140.25 Aligned_cols=112 Identities=24% Similarity=0.248 Sum_probs=88.8
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCchh-----hHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETE-----ELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~-----~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|...+.||+|+||.||+|... |+.||||.+...... ...+.+|+.+ .++||| ...+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 45667788999999999999974 899999998654322 3568889888 899999 5677789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++..+ .+++.+...++.|+++||+|||+....+|+||||+
T Consensus 86 e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dik 135 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLK 135 (271)
T ss_dssp ECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCS
T ss_pred EcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCc
Confidence 999999 7777632 48999999999999999999995544559999986
No 219
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.53 E-value=1e-14 Score=144.26 Aligned_cols=112 Identities=18% Similarity=0.156 Sum_probs=93.5
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch----hhHHHHHHhhc--cccccC--------CCCCCccee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET----EELAFLETSST--DFRHYN--------SHTDNDDSS 546 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~----~~~~f~~e~~~--~l~H~n--------~~~~~~~lv 546 (599)
.++|...+.||+|+||.||+++. .+|+.||+|.+..... ....+.+|+.+ .++||| .+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 35677788999999999999996 4699999999965421 23457778877 899999 456778999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++... ..+++.....++.||+.||+||| ..+|+||||+
T Consensus 85 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlk 133 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLK 133 (318)
T ss_dssp ECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCC
T ss_pred EeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCC
Confidence 9999999 8888742 34899999999999999999999 7899999996
No 220
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.52 E-value=8.4e-15 Score=157.93 Aligned_cols=105 Identities=18% Similarity=0.208 Sum_probs=89.6
Q ss_pred eecccCCceEEEEEeC---CCCEEEEEEecCCch--hhHHHHHHhhc--cccccC-------CCCCCcceeecccccc--
Q 007553 490 CIGTGGYGSVYRAQLS---SGRVVALKKLHRSET--EELAFLETSST--DFRHYN-------SHTDNDDSSDEHLANN-- 553 (599)
Q Consensus 490 ~lg~g~~g~v~~~~~~---~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n-------~~~~~~~lv~e~~~~G-- 553 (599)
.||+|+||.||+|.+. ++..||||+++.... ...+|.+|+.+ +++||| ...+..++|||||++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L 422 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL 422 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence 6999999999999863 466899999976432 35789999998 999999 3456789999999999
Q ss_pred cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 554 EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 554 ~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+++..+ ...++|.++..|+.|||+||+||| ..+|+||||+
T Consensus 423 ~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlk 463 (613)
T 2ozo_A 423 HKFLVGK--REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLA 463 (613)
T ss_dssp HHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred HHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCC
Confidence 8888753 345899999999999999999999 7899999996
No 221
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.52 E-value=1.4e-14 Score=147.50 Aligned_cols=114 Identities=22% Similarity=0.228 Sum_probs=93.8
Q ss_pred hhccccceecccCCceEEEEEe--------CCCCEEEEEEecCCchh--hHHHHHHhhc--cc-cccC--------CCCC
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL--------SSGRVVALKKLHRSETE--ELAFLETSST--DF-RHYN--------SHTD 541 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~--------~~g~~vavK~l~~~~~~--~~~f~~e~~~--~l-~H~n--------~~~~ 541 (599)
++|...+.||+|+||.||+|.. ..++.||||++...... ...+.+|+++ .+ +||| ...+
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 4566778899999999999985 22367999999765332 4678899988 77 9999 5677
Q ss_pred Ccceeecccccc--cccccCCCC-------------CCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 542 NDDSSDEHLANN--EHFLSAPEN-------------YERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 542 ~~~lv~e~~~~G--~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..++||||+++| .+++..... ...++|.++..|+.||++||+||| ..+|+||||+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlk 218 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLA 218 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCC
Confidence 889999999999 888875321 245899999999999999999999 7899999996
No 222
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.52 E-value=1.1e-14 Score=150.03 Aligned_cols=112 Identities=13% Similarity=0.069 Sum_probs=92.7
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch---------hhHHHHHHhhc--cccccC-------CCCCC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET---------EELAFLETSST--DFRHYN-------SHTDN 542 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~---------~~~~f~~e~~~--~l~H~n-------~~~~~ 542 (599)
.++|...+.||+|+||.||+|.. .+++.||||.+..... ....+.+|+.+ +++||| ...+.
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 213 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 213 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSE
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCc
Confidence 45688888999999999999985 4689999999865321 12347889988 999999 34566
Q ss_pred cceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++|||||++| .+++... ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 214 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlk 266 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLK 266 (419)
T ss_dssp EEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred eEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCC
Confidence 89999999999 7777742 35899999999999999999999 7799999996
No 223
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.52 E-value=1.3e-14 Score=145.14 Aligned_cols=112 Identities=21% Similarity=0.254 Sum_probs=86.5
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC-------------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN-------------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n-------------~~~~~~~lv~ 547 (599)
++|.....||+|+||.||+|+. +|+.||||++............|+.. .++||| ......++||
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~ 91 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM 91 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence 4577778899999999999987 68999999997544332222333333 689999 1122458999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCC------CccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRK------YRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~------~~~i~Hrdl~ 599 (599)
||+++| .+++..+. .+|.++..|+.||++||+|||+.+ .++|+||||+
T Consensus 92 e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dik 147 (336)
T 3g2f_A 92 EYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLN 147 (336)
T ss_dssp CCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCS
T ss_pred ecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccc
Confidence 999999 88887533 589999999999999999999542 2399999996
No 224
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.52 E-value=1.4e-14 Score=143.33 Aligned_cols=115 Identities=22% Similarity=0.256 Sum_probs=95.0
Q ss_pred hhhccccceecccCCceEEEEEe------CCCCEEEEEEecCCch--hhHHHHHHhhc--cc-cccC--------CCCCC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL------SSGRVVALKKLHRSET--EELAFLETSST--DF-RHYN--------SHTDN 542 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~------~~g~~vavK~l~~~~~--~~~~f~~e~~~--~l-~H~n--------~~~~~ 542 (599)
.++|...+.||+|+||.||+|.. .+++.||||++..... ....+.+|+.+ ++ +||| ...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 34677778899999999999984 3567999999976542 24678899988 88 9999 56778
Q ss_pred cceeecccccc--cccccCCCC---------------CCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN--EHFLSAPEN---------------YERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G--~~~l~~~~~---------------~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++||||+++| .+++..... ...++|.++..++.||++||+||| ..+|+||||+
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlk 172 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLA 172 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCc
Confidence 89999999999 888875321 225899999999999999999999 7899999996
No 225
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.52 E-value=1.2e-14 Score=143.71 Aligned_cols=115 Identities=21% Similarity=0.199 Sum_probs=94.6
Q ss_pred hhhccccceecccCCceEEEEEe------CCCCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------CCCCCc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL------SSGRVVALKKLHRSET--EELAFLETSST--DFRHYN--------SHTDND 543 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~------~~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~~~~~~ 543 (599)
.++|...+.||+|+||.||+|.. .+++.||||.+..... ....+.+|+.+ .++||| ...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45677778899999999999985 2458899999976432 24678899988 999999 467788
Q ss_pred ceeecccccc--cccccCCCC---------------------CCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 544 DSSDEHLANN--EHFLSAPEN---------------------YERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G--~~~l~~~~~---------------------~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++||||+++| .+++..... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dik 177 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLA 177 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccc
Confidence 9999999999 888875321 234899999999999999999999 7899999996
No 226
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.52 E-value=1.8e-14 Score=143.97 Aligned_cols=115 Identities=21% Similarity=0.252 Sum_probs=93.1
Q ss_pred hhhccccceecccCCceEEEEEe--------CCCCEEEEEEecCCch--hhHHHHHHhhc--cc-cccC--------CCC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL--------SSGRVVALKKLHRSET--EELAFLETSST--DF-RHYN--------SHT 540 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~--------~~g~~vavK~l~~~~~--~~~~f~~e~~~--~l-~H~n--------~~~ 540 (599)
.++|...+.||+|+||.||+|.. .+++.||||++..... ....+.+|+.+ .+ +||| ...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 35677778899999999999986 2467899999976532 24678889988 77 9999 466
Q ss_pred CCcceeecccccc--cccccCCCC-------------CCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 541 DNDDSSDEHLANN--EHFLSAPEN-------------YERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 541 ~~~~lv~e~~~~G--~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+..++||||+++| .+++..... ...++|.++..++.||++||+||| ..+|+||||+
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlk 184 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLA 184 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCc
Confidence 7889999999999 888875331 234899999999999999999999 7899999996
No 227
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.52 E-value=8.4e-15 Score=143.43 Aligned_cols=110 Identities=16% Similarity=0.182 Sum_probs=92.4
Q ss_pred hccccceecccCCceEEEEEe-CCCCEEEEEEecCCch----hhHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 484 DFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET----EELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~----~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
.|...+.||+|+||.||+|.. .+++.||+|.+..... ....|.+|+.+ .++||| ...+..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 91 (294)
T 4eqm_A 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME 91 (294)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence 466677899999999999985 4689999999854322 14578889988 999999 45677899999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++... .++++.++..++.||++||+||| ..+|+||||+
T Consensus 92 ~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlk 138 (294)
T 4eqm_A 92 YIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIK 138 (294)
T ss_dssp CCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred CCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCC
Confidence 99999 8888743 35899999999999999999999 7899999996
No 228
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.52 E-value=7.3e-15 Score=147.29 Aligned_cols=112 Identities=19% Similarity=0.187 Sum_probs=93.2
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch----hhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET----EELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~----~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
..|...+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+ +++||| ...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4577778899999999999985 5799999999975422 13578899998 999999 4567889999
Q ss_pred cccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||++++ .+++.... ..++|.++..++.||++||+||| ..+|+||||+
T Consensus 134 e~~~g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlk 181 (348)
T 1u5q_A 134 EYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVK 181 (348)
T ss_dssp ECCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCS
T ss_pred ecCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCC
Confidence 999977 77775422 35899999999999999999999 7799999996
No 229
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.52 E-value=1.1e-14 Score=147.32 Aligned_cols=111 Identities=14% Similarity=0.146 Sum_probs=93.6
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch----hhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET----EELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~----~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|.....||+|+||.||++... +|+.||+|.+..... ....+.+|+.+ .++||| ...+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45777888999999999999964 689999999865321 14568889988 999999 4667789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++.. ...+++.++..++.||+.||+||| ..+|+||||+
T Consensus 95 e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlk 142 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMK 142 (384)
T ss_dssp CCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred ecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCc
Confidence 999999 777774 234899999999999999999999 7899999996
No 230
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.52 E-value=8.9e-15 Score=142.81 Aligned_cols=115 Identities=17% Similarity=0.193 Sum_probs=95.1
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHhhc--cc-cccC--------CCCCCccee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSE---TEELAFLETSST--DF-RHYN--------SHTDNDDSS 546 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~---~~~~~f~~e~~~--~l-~H~n--------~~~~~~~lv 546 (599)
.++|...+.||+|+||.||+|... +|+.||||++.... ....++.+|+.. .+ +||| ...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456888889999999999999964 79999999997542 234667788877 66 9999 456788999
Q ss_pred ecccccc--cccccCCC-CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPE-NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~-~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++.... ....+++.++..|+.||++||+||| ..+|+||||+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dik 142 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIK 142 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCC
Confidence 9999999 88887521 1245899999999999999999999 7899999996
No 231
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.51 E-value=1.2e-14 Score=146.03 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=87.8
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
.+.|.....||+|+||.||+|... +++.||||++.... ....+.+|+.+ +++||| ...+..++||||+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 130 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence 345777788999999999999975 58899999997643 34567788888 999999 4567789999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++..+ ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 131 ~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dik 175 (349)
T 2w4o_A 131 TGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLK 175 (349)
T ss_dssp CSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred CCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCC
Confidence 999 7888742 34899999999999999999999 7799999996
No 232
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.51 E-value=1.5e-14 Score=146.20 Aligned_cols=121 Identities=16% Similarity=0.156 Sum_probs=99.4
Q ss_pred cHHHHHHHhhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchh------------hHHHHHHhhc--cccccC--
Q 007553 474 TFEEMIQATEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETE------------ELAFLETSST--DFRHYN-- 537 (599)
Q Consensus 474 ~~~~l~~at~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~------------~~~f~~e~~~--~l~H~n-- 537 (599)
..+++....++|...+.||+|+||.||+|...+|+.||||++...... ...+.+|+.+ .++|||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456777888899999999999999999999878999999998542211 2678899998 999999
Q ss_pred -----------CCCCCcceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 538 -----------SHTDNDDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 538 -----------~~~~~~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
......++||||++++ .+++... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlk 161 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLH 161 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred ceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCC
Confidence 1122468999999977 7777743 235899999999999999999999 7799999996
No 233
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.51 E-value=2.6e-14 Score=139.51 Aligned_cols=112 Identities=20% Similarity=0.248 Sum_probs=90.9
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh--------hHHHHHHhhc--cccccC------CCCCCcce
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE--------ELAFLETSST--DFRHYN------SHTDNDDS 545 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~--------~~~f~~e~~~--~l~H~n------~~~~~~~l 545 (599)
++|...+.||+|+||.||+|.. .+++.||||++...... ...|.+|+.+ +++||| ...+..++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~l 98 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM 98 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEE
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeE
Confidence 4566678899999999999996 47899999998654321 1578899988 999999 23344579
Q ss_pred eecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCcc--ccccccC
Q 007553 546 SDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRK--SYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~--i~Hrdl~ 599 (599)
||||+++| .+++..+ ...++|.++..++.|+++||+||| ..+ |+||||+
T Consensus 99 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dik 151 (287)
T 4f0f_A 99 VMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLR 151 (287)
T ss_dssp EEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCS
T ss_pred EEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCC
Confidence 99999999 6777643 235899999999999999999999 555 9999996
No 234
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.51 E-value=1.6e-14 Score=141.63 Aligned_cols=112 Identities=17% Similarity=0.153 Sum_probs=92.5
Q ss_pred ccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh-hHHHHHHhhc--cccccC--------CCCCCcceeeccccc
Q 007553 485 FHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE-ELAFLETSST--DFRHYN--------SHTDNDDSSDEHLAN 552 (599)
Q Consensus 485 ~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~~~ 552 (599)
+.....||+|+||.||+|.. .+++.||||.+...... ...+.+|+.+ .++||| ...+..++||||+++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 34455799999999999995 56899999999765433 5678889988 999999 356778999999999
Q ss_pred c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 553 N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 553 G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
| .+++........+++..+..++.||++||+||| ..+|+||||+
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~ 149 (295)
T 2clq_A 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIK 149 (295)
T ss_dssp EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCC
Confidence 9 888876544445788999999999999999999 7799999986
No 235
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.51 E-value=3.3e-15 Score=148.47 Aligned_cols=121 Identities=21% Similarity=0.295 Sum_probs=98.4
Q ss_pred HHHHHHhhhccccceecccCCceEEEEEeC------CCCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------
Q 007553 476 EEMIQATEDFHIKYCIGTGGYGSVYRAQLS------SGRVVALKKLHRSET--EELAFLETSST--DFRHYN-------- 537 (599)
Q Consensus 476 ~~l~~at~~~~~~~~lg~g~~g~v~~~~~~------~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n-------- 537 (599)
+++..+.++|...+.||+|+||.||+|... +++.||||.+..... ....|.+|+.+ .++|||
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344455677888899999999999999853 367899999975432 24568899988 999999
Q ss_pred CCCCCcceeecccccc--cccccCCC-------CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 538 SHTDNDDSSDEHLANN--EHFLSAPE-------NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 538 ~~~~~~~lv~e~~~~G--~~~l~~~~-------~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
...+..++||||+++| .+++...+ ....+++.++.+++.||++||+||| ..+|+||||+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dik 165 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLA 165 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCS
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCc
Confidence 5677889999999999 88886421 1245799999999999999999999 7799999996
No 236
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.51 E-value=2.6e-14 Score=140.78 Aligned_cols=110 Identities=22% Similarity=0.304 Sum_probs=91.1
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC-------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN-------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n-------~~~~~~~lv~e~~ 550 (599)
.+|.....||+|+||.||+|... ..+|||.++... .....|.+|+.+ +++||| ...+..++||||+
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~ 113 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWC 113 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCcEEEEEecC
Confidence 34666778999999999999863 468999886532 224678899988 999999 4567789999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++.... ..+++.++..|+.||++||+||| ..+|+||||+
T Consensus 114 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlk 159 (307)
T 3lb7_A 114 EGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMK 159 (307)
T ss_dssp SSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred CCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCC
Confidence 999 88887433 35899999999999999999999 7799999996
No 237
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.51 E-value=1.9e-14 Score=142.61 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=82.7
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------CCCCCcceeecc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------SHTDNDDSSDEH 549 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~ 549 (599)
++|...+.||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ +++||| ...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 4566677899999999999985 46899999999754332 4678889988 999999 466778999999
Q ss_pred cccc-cccccCCC---CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 550 LANN-EHFLSAPE---NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 550 ~~~G-~~~l~~~~---~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++++ .+++.... ....+++..+..++.||++||+||| ..+|+||||+
T Consensus 85 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlk 135 (317)
T 2pmi_A 85 MDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLK 135 (317)
T ss_dssp CCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred cCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCC
Confidence 9977 87876421 2235899999999999999999999 7899999996
No 238
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.51 E-value=7.8e-15 Score=147.48 Aligned_cols=114 Identities=11% Similarity=0.031 Sum_probs=93.5
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch------hhHHHHHHhhc--cccccC--------CCCCCcce
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET------EELAFLETSST--DFRHYN--------SHTDNDDS 545 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~------~~~~f~~e~~~--~l~H~n--------~~~~~~~l 545 (599)
+.|...+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+ .++||| ...+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4577778899999999999985 4689999999864321 24568899998 999999 45677899
Q ss_pred eecccccc--cccccCC-CCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN--EHFLSAP-ENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~-~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||||+++| .+++..+ .....+++..+..++.||++||+||| ..+|+||||+
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlk 157 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVK 157 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCC
Confidence 99999999 6666542 22345899999999999999999999 7899999996
No 239
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.51 E-value=1e-14 Score=142.13 Aligned_cols=114 Identities=14% Similarity=0.114 Sum_probs=94.5
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------CCCCCcceeecc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------SHTDNDDSSDEH 549 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~ 549 (599)
+.|...+.||+|+||.||++.. .+|+.||+|++...... ...+.+|+.+ +++||| ...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 4577788899999999999986 46899999998764322 4678899988 999999 456778999999
Q ss_pred cccc--cccccCC-CCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 550 LANN--EHFLSAP-ENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 550 ~~~G--~~~l~~~-~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+++| .+++... .....+++..+..|+.||++||+||| ..+|+||||+
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dik 151 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLK 151 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCS
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCC
Confidence 9999 7777532 12345899999999999999999999 7899999996
No 240
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.51 E-value=1.4e-14 Score=147.91 Aligned_cols=114 Identities=11% Similarity=0.073 Sum_probs=95.2
Q ss_pred hhhccccceeccc--CCceEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHhhc--cccccC--------CCCCCcce
Q 007553 482 TEDFHIKYCIGTG--GYGSVYRAQLS-SGRVVALKKLHRSET---EELAFLETSST--DFRHYN--------SHTDNDDS 545 (599)
Q Consensus 482 t~~~~~~~~lg~g--~~g~v~~~~~~-~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n--------~~~~~~~l 545 (599)
.++|.....||+| +||.||+|... +|+.||||++..... ....+.+|+.+ .++||| ...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3457777889999 99999999964 699999999975432 24567789988 999999 46677899
Q ss_pred eecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||||++| .+++.... ...+++.++..|+.||++||+||| ..+|+|||||
T Consensus 104 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlk 155 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVK 155 (389)
T ss_dssp EEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred EEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 99999999 77876532 234899999999999999999999 7899999996
No 241
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.51 E-value=7.7e-15 Score=146.65 Aligned_cols=114 Identities=19% Similarity=0.253 Sum_probs=92.5
Q ss_pred HHhhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch----hhHHHHHHhhc--c-ccccC--------CCCCCc
Q 007553 480 QATEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET----EELAFLETSST--D-FRHYN--------SHTDND 543 (599)
Q Consensus 480 ~at~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~----~~~~f~~e~~~--~-l~H~n--------~~~~~~ 543 (599)
...++|...+.||+|+||.||+|... +|+.||||++..... ....+..|..+ . .+||| ...+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34567888899999999999999974 689999999975421 23456667776 3 49999 456778
Q ss_pred ceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 544 DSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++||||+++| .+++... ..+++.++..++.||+.||+||| ..+|+||||+
T Consensus 94 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlk 145 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLK 145 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCC
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCC
Confidence 9999999999 7788742 24899999999999999999999 7899999996
No 242
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.51 E-value=1.3e-14 Score=143.33 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=89.8
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHhhc---cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET---EELAFLETSST---DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~---~~~~f~~e~~~---~l~H~n--------~~~~~~~lv~ 547 (599)
++|...+.||+|+||+||+|... +|+.||||++..... ...++..|+.. ..+||| ..++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 46888889999999999999975 799999999865322 23345555544 449999 4667789999
Q ss_pred cccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+.++ .+++.... ..++|.++..|+.||+.||+||| ..+|+||||+
T Consensus 137 e~~~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 184 (311)
T 3p1a_A 137 ELCGPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVK 184 (311)
T ss_dssp ECCCCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCC
Confidence 999666 77776532 35999999999999999999999 6799999996
No 243
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.51 E-value=2e-14 Score=149.61 Aligned_cols=111 Identities=18% Similarity=0.185 Sum_probs=93.7
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|.....||+|+||.||+|... +|+.||||++...... ...+.+|+.+ .++||| ...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 34666778999999999999964 7999999999654221 3568889988 999999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 96 E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLk 143 (476)
T 2y94_A 96 EYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLK 143 (476)
T ss_dssp ECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCS
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCCCccccc
Confidence 999999 8888742 35899999999999999999999 7899999996
No 244
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.51 E-value=1.6e-14 Score=143.07 Aligned_cols=124 Identities=20% Similarity=0.226 Sum_probs=98.6
Q ss_pred ccHHHHHHHhhhccccceecccCCceEEEEEe------CCCCEEEEEEecCCchh--hHHHHHHhhc--cc-cccC----
Q 007553 473 ITFEEMIQATEDFHIKYCIGTGGYGSVYRAQL------SSGRVVALKKLHRSETE--ELAFLETSST--DF-RHYN---- 537 (599)
Q Consensus 473 ~~~~~l~~at~~~~~~~~lg~g~~g~v~~~~~------~~g~~vavK~l~~~~~~--~~~f~~e~~~--~l-~H~n---- 537 (599)
+...++....++|...+.||+|+||.||+|.. .+++.||||.+...... ...+.+|+.+ ++ +|||
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455555667888889999999999999974 35689999999765332 4578889988 77 7899
Q ss_pred -----CCCCCcceeecccccc--cccccCCCC-------------CCCCChHHHHHHHHHHHHHHhhhhCCCCccccccc
Q 007553 538 -----SHTDNDDSSDEHLANN--EHFLSAPEN-------------YERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQR 597 (599)
Q Consensus 538 -----~~~~~~~lv~e~~~~G--~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrd 597 (599)
..+...++||||+++| .+++..... ...+++.++..++.||++||+||| ..+|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCccccc
Confidence 2344589999999999 888875432 123889999999999999999999 78999999
Q ss_pred cC
Q 007553 598 LY 599 (599)
Q Consensus 598 l~ 599 (599)
|+
T Consensus 174 ik 175 (316)
T 2xir_A 174 LA 175 (316)
T ss_dssp CS
T ss_pred Cc
Confidence 96
No 245
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.51 E-value=1.1e-14 Score=144.85 Aligned_cols=112 Identities=17% Similarity=0.193 Sum_probs=89.0
Q ss_pred hhhccccceecccCCceEEEEEe----CCCCEEEEEEecCCch-----hhHHHHHHhhc--cccccC--------CCCCC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL----SSGRVVALKKLHRSET-----EELAFLETSST--DFRHYN--------SHTDN 542 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~----~~g~~vavK~l~~~~~-----~~~~f~~e~~~--~l~H~n--------~~~~~ 542 (599)
.++|...+.||+|+||.||++.. .+|+.||+|++..... ....+.+|+.+ .++||| ...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 34677788899999999999986 4789999999976421 23457778887 999999 46678
Q ss_pred cceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++||||+++| .+++... ..+++.+...++.||+.||+||| ..+|+||||+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlk 148 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLK 148 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred EEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCC
Confidence 89999999999 7788642 24889999999999999999999 7799999996
No 246
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.51 E-value=1.5e-14 Score=152.82 Aligned_cols=114 Identities=18% Similarity=0.184 Sum_probs=94.9
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch----hhHHHHHHhhc--cccccC--------CCCCCccee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET----EELAFLETSST--DFRHYN--------SHTDNDDSS 546 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~----~~~~f~~e~~~--~l~H~n--------~~~~~~~lv 546 (599)
.++|...+.||+|+||.||+|... +|+.||||++..... ....+.+|+.+ .++||| ...+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356777889999999999999964 699999999965421 13567888888 999999 466788999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||||++| .+++.... ...+++.++..++.||+.||+||| ..+|+||||+
T Consensus 263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLK 313 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLK 313 (576)
T ss_dssp ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCc
Confidence 9999999 77777532 334899999999999999999999 7799999996
No 247
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.51 E-value=9.9e-15 Score=144.23 Aligned_cols=111 Identities=13% Similarity=0.113 Sum_probs=91.0
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCC----Cc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTD----ND 543 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~----~~ 543 (599)
+.|...+.||+|+||.||+|.. .+|+.||||++...... ...|.+|+.+ +++||| .... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 3466678899999999999995 57899999999764322 3568889988 999999 1112 24
Q ss_pred ceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 544 DSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++||||+++| .++++.. ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 92 ~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlk 143 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVK 143 (311)
T ss_dssp EEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred EEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCC
Confidence 8999999999 8888742 35899999999999999999999 7899999996
No 248
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.51 E-value=2.5e-14 Score=142.36 Aligned_cols=115 Identities=22% Similarity=0.270 Sum_probs=92.0
Q ss_pred hhhccccceecccCCceEEEEEe------CCCCEEEEEEecCCc--hhhHHHHHHhhc--cccccC--------CCCCCc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL------SSGRVVALKKLHRSE--TEELAFLETSST--DFRHYN--------SHTDND 543 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~------~~g~~vavK~l~~~~--~~~~~f~~e~~~--~l~H~n--------~~~~~~ 543 (599)
.++|...+.||+|+||.||+|.. .+++.||||++.... ....++.+|+.+ +++||| ...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 34677778899999999999984 246789999996543 235678899988 899999 466778
Q ss_pred ceeecccccc--cccccCCC----CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 544 DSSDEHLANN--EHFLSAPE----NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G--~~~l~~~~----~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++||||+++| .+++.... ....+++.+++.++.||++||+||| ..+|+||||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlk 167 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIA 167 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCC
Confidence 9999999999 88887532 1245899999999999999999999 7899999996
No 249
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.51 E-value=1.1e-14 Score=146.02 Aligned_cols=111 Identities=21% Similarity=0.152 Sum_probs=93.6
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch----hhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET----EELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~----~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|...+.||+|+||.||+++.. +|+.||||.+..... ....+.+|+.+ .++||| ...+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 46777788999999999999964 689999999965432 23567888888 999999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++... ..+++.++..++.||+.||+||| ..+|+||||+
T Consensus 121 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlk 168 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168 (350)
T ss_dssp ECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCc
Confidence 999999 7888742 24899999999999999999999 7899999996
No 250
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.50 E-value=1.2e-14 Score=144.64 Aligned_cols=112 Identities=17% Similarity=0.279 Sum_probs=87.7
Q ss_pred hhccccceecccCCceEEEEEe-CCCC----EEEEEEecCCch--hhHHHHHHhhc--cccccC-------CCCCCccee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGR----VVALKKLHRSET--EELAFLETSST--DFRHYN-------SHTDNDDSS 546 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~----~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n-------~~~~~~~lv 546 (599)
++|...+.||+|+||.||+|.. .+|+ .||+|.+..... ...+|.+|+.+ +++||| ...+..++|
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v 94 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 4577778899999999999995 3444 368888865432 24679999988 999999 334568899
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||+++| .+++.... ..++|.+++.|+.||++||+||| ..+|+||||+
T Consensus 95 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dik 144 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLA 144 (327)
T ss_dssp EECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred EEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCC
Confidence 9999999 88887533 34899999999999999999999 7799999996
No 251
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.50 E-value=8.8e-15 Score=146.80 Aligned_cols=112 Identities=17% Similarity=0.194 Sum_probs=91.7
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch----hhHHHHHHhhc--cc-cccC--------CCCCCcce
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET----EELAFLETSST--DF-RHYN--------SHTDNDDS 545 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~----~~~~f~~e~~~--~l-~H~n--------~~~~~~~l 545 (599)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ....+.+|+.+ .+ +||| ...+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 45788888999999999999996 4689999999975421 13456777777 44 7999 46677899
Q ss_pred eecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||||+++| .++++.. ..+++.+...++.||+.||+||| ..+|+||||+
T Consensus 102 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlk 151 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLH---DKGIIYRDLK 151 (353)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCC
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCC
Confidence 99999999 7777642 34899999999999999999999 7899999996
No 252
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.50 E-value=2.6e-14 Score=142.26 Aligned_cols=112 Identities=26% Similarity=0.326 Sum_probs=92.5
Q ss_pred hhccccceecccCCceEEEEEe-----CCCCEEEEEEecCCchh-hHHHHHHhhc--cccccC--------C--CCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-----SSGRVVALKKLHRSETE-ELAFLETSST--DFRHYN--------S--HTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-----~~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n--------~--~~~~~~ 544 (599)
++|...+.||+|+||.||+|.+ .+|+.||||++...... ...|.+|+.+ +++||| . ..+..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 3466678899999999999984 36889999999765433 5678999998 999999 1 234689
Q ss_pred eeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++| .+++...+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 121 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dik 172 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLA 172 (326)
T ss_dssp EEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred EEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCC
Confidence 999999999 88887543 34899999999999999999999 7899999996
No 253
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.50 E-value=2.1e-14 Score=143.62 Aligned_cols=114 Identities=19% Similarity=0.178 Sum_probs=89.5
Q ss_pred HhhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCC----CCccee
Q 007553 481 ATEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHT----DNDDSS 546 (599)
Q Consensus 481 at~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~----~~~~lv 546 (599)
..++|...+.||+|+||.||+|+.. |+.||||++............|+.. .++||| ... ...++|
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 3467888899999999999999985 8999999996543322223333433 569999 122 568999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCC-----CccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRK-----YRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~-----~~~i~Hrdl~ 599 (599)
|||+++| .++++.. .+++.++..++.||++||+|||+.+ .++|+||||+
T Consensus 114 ~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dik 169 (337)
T 3mdy_A 114 TDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169 (337)
T ss_dssp ECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCC
T ss_pred EeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccc
Confidence 9999999 8888743 3899999999999999999999432 3499999996
No 254
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.50 E-value=1.8e-14 Score=141.71 Aligned_cols=111 Identities=19% Similarity=0.246 Sum_probs=89.3
Q ss_pred hccccceecccCCceEEEEEe-----CCCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------C--CCCCcc
Q 007553 484 DFHIKYCIGTGGYGSVYRAQL-----SSGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------S--HTDNDD 544 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~-----~~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~--~~~~~~ 544 (599)
.|...+.||+|+||.||+|.+ .+|+.||||++...... ...+.+|+.+ .++||| . ..+..+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 356667899999999999984 36889999999754332 4678889988 999999 1 236678
Q ss_pred eeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 102 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dik 153 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLA 153 (302)
T ss_dssp EEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCc
Confidence 999999999 88886432 34899999999999999999999 7899999986
No 255
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.50 E-value=1.2e-14 Score=145.44 Aligned_cols=111 Identities=15% Similarity=0.056 Sum_probs=87.9
Q ss_pred hhhccccceecccCCceEEEEEeCCCCEEEEEEecCCch---------hhHHHHHHhhc--ccc----------------
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSET---------EELAFLETSST--DFR---------------- 534 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~---------~~~~f~~e~~~--~l~---------------- 534 (599)
.++|...+.||+|+||.||+|+. +|+.||||++..... ....+.+|+.+ +++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 34577778899999999999997 689999999975421 12567888877 554
Q ss_pred ----------ccC--------C-------------CCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHH
Q 007553 535 ----------HYN--------S-------------HTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKG 581 (599)
Q Consensus 535 ----------H~n--------~-------------~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~g 581 (599)
||| . ..+..++||||+++| .+.+.. ..+++.+...|+.||++|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 455 1 267899999999999 555543 248999999999999999
Q ss_pred HhhhhCCCCccccccccC
Q 007553 582 FKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 582 l~yLH~~~~~~i~Hrdl~ 599 (599)
|+|||+ ..+|+|||||
T Consensus 174 L~~lH~--~~~ivHrDlK 189 (336)
T 2vuw_A 174 LAVAEA--SLRFEHRDLH 189 (336)
T ss_dssp HHHHHH--HHCCBCSCCC
T ss_pred HHHHHH--hCCEeECCCC
Confidence 999992 3689999997
No 256
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.50 E-value=2.2e-14 Score=139.30 Aligned_cols=113 Identities=19% Similarity=0.229 Sum_probs=94.8
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCCCccee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTDNDDSS 546 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv 546 (599)
.++|.....||+|+||.||+|.. .+|+.||||.+...... ...+.+|+.+ .++||| ...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35677788899999999999985 57999999999654321 3568889988 999999 456778999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++..+ ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 90 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~ 139 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLH---SHGILHRDLT 139 (278)
T ss_dssp EECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCC
T ss_pred EecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCC
Confidence 9999999 8888753 245899999999999999999999 7799999986
No 257
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.50 E-value=2.4e-14 Score=142.81 Aligned_cols=110 Identities=25% Similarity=0.325 Sum_probs=90.9
Q ss_pred ccccceecccCCceEEEEEeCC-----CCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 485 FHIKYCIGTGGYGSVYRAQLSS-----GRVVALKKLHRSET--EELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 485 ~~~~~~lg~g~~g~v~~~~~~~-----g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
|...+.||+|+||.||+|.... +..||||.+..... ....|.+|+.+ .++||| ...+..++||
T Consensus 46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 125 (333)
T 1mqb_A 46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT 125 (333)
T ss_dssp EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEE
Confidence 3445789999999999998632 24699999976432 24578899988 999999 4667889999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++..+. ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 126 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 174 (333)
T 1mqb_A 126 EYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLA 174 (333)
T ss_dssp ECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred eCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCC
Confidence 999999 88887532 35899999999999999999999 7799999996
No 258
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.50 E-value=9.8e-15 Score=151.82 Aligned_cols=112 Identities=19% Similarity=0.165 Sum_probs=86.5
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc----hhhHHHHHHhhc--cccccC--------CCCCCccee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE----TEELAFLETSST--DFRHYN--------SHTDNDDSS 546 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~----~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv 546 (599)
.++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+ .++||| ...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 45688888999999999999985 568999999996532 123567788887 999999 456778999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCC-ccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKY-RKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~-~~i~Hrdl~ 599 (599)
||||++| .+++... ..+++.++..++.||++||+||| . .+|+||||+
T Consensus 227 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlk 276 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLK 276 (446)
T ss_dssp ECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCC
T ss_pred EeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCC
Confidence 9999999 7777642 34899999999999999999999 5 789999996
No 259
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.50 E-value=1.6e-14 Score=143.90 Aligned_cols=112 Identities=22% Similarity=0.281 Sum_probs=93.9
Q ss_pred hhccccceecccCCceEEEEEe-----CCCCEEEEEEecCCchh-hHHHHHHhhc--cccccC----------CCCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-----SSGRVVALKKLHRSETE-ELAFLETSST--DFRHYN----------SHTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-----~~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n----------~~~~~~~ 544 (599)
++|...+.||+|+||.||+|.+ .+++.||||++...... ...+.+|+.+ +++||| ...+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4566678899999999999984 36889999999776443 4668899998 999999 2455688
Q ss_pred eeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++| .+++.... ..+++.++..|+.||++||+||| ..+|+||||+
T Consensus 103 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dik 154 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLA 154 (327)
T ss_dssp EEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCC
Confidence 999999999 88887532 24899999999999999999999 7899999996
No 260
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.50 E-value=3.4e-14 Score=140.80 Aligned_cols=108 Identities=16% Similarity=0.187 Sum_probs=90.7
Q ss_pred ccccceecccCCceEEEEEeC-----CCCEEEEEEecCCch--hhHHHHHHhhc--cccccC----------CCCCCcce
Q 007553 485 FHIKYCIGTGGYGSVYRAQLS-----SGRVVALKKLHRSET--EELAFLETSST--DFRHYN----------SHTDNDDS 545 (599)
Q Consensus 485 ~~~~~~lg~g~~g~v~~~~~~-----~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n----------~~~~~~~l 545 (599)
|...+.||+|+||.||++.+. +|+.||||++..... ....|.+|+.+ +++||| ......++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 466678999999999998763 678999999976532 24678899998 999999 12456789
Q ss_pred eecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||||+++| .+++.... +++.++..++.||++||+||| ..+|+||||+
T Consensus 113 v~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dik 161 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLA 161 (318)
T ss_dssp EECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCc
Confidence 99999999 88887532 899999999999999999999 7899999996
No 261
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.50 E-value=3.6e-14 Score=139.24 Aligned_cols=111 Identities=25% Similarity=0.295 Sum_probs=90.1
Q ss_pred hccccceecccCCceEEEEEeCC----CCEEEEEEecCCch--hhHHHHHHhhc--cccccC---------CCCCCccee
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLSS----GRVVALKKLHRSET--EELAFLETSST--DFRHYN---------SHTDNDDSS 546 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~~----g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n---------~~~~~~~lv 546 (599)
.|...+.||+|+||.||+|...+ +..||||.+..... ....|.+|+.+ +++||| ...+..++|
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 105 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 105 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence 35556789999999999998632 23689999876433 24678899988 999999 245567899
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 106 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dik 155 (298)
T 3f66_A 106 LPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLA 155 (298)
T ss_dssp EECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred EeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCc
Confidence 9999999 88887533 34899999999999999999999 7899999996
No 262
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.50 E-value=3.1e-14 Score=138.94 Aligned_cols=106 Identities=18% Similarity=0.202 Sum_probs=89.9
Q ss_pred ceecccCCceEEEEEeC---CCCEEEEEEecCCch--hhHHHHHHhhc--cccccC-------CCCCCcceeecccccc-
Q 007553 489 YCIGTGGYGSVYRAQLS---SGRVVALKKLHRSET--EELAFLETSST--DFRHYN-------SHTDNDDSSDEHLANN- 553 (599)
Q Consensus 489 ~~lg~g~~g~v~~~~~~---~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n-------~~~~~~~lv~e~~~~G- 553 (599)
..||+|+||.||+|... +++.||||.+..... ....+.+|+.+ .++||| ...+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 95 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGP 95 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCCCC
Confidence 37999999999999853 578899999977432 35678899988 899999 4556789999999999
Q ss_pred -cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 554 -EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 554 -~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+++..+ ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 96 L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlk 137 (287)
T 1u59_A 96 LHKFLVGK--REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLA 137 (287)
T ss_dssp HHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred HHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCc
Confidence 8888743 345899999999999999999999 7899999986
No 263
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.50 E-value=1.4e-14 Score=156.58 Aligned_cols=105 Identities=16% Similarity=0.187 Sum_probs=89.0
Q ss_pred ceecccCCceEEEEEeC---CCCEEEEEEecCCchh---hHHHHHHhhc--cccccC-------CCCCCcceeecccccc
Q 007553 489 YCIGTGGYGSVYRAQLS---SGRVVALKKLHRSETE---ELAFLETSST--DFRHYN-------SHTDNDDSSDEHLANN 553 (599)
Q Consensus 489 ~~lg~g~~g~v~~~~~~---~g~~vavK~l~~~~~~---~~~f~~e~~~--~l~H~n-------~~~~~~~lv~e~~~~G 553 (599)
+.||+|+||.||+|.+. .++.||||+++..... ..+|.+|+.+ +++||| ...+..++|||||++|
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 454 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence 46999999999999753 4678999999764322 4679999998 999999 4556789999999999
Q ss_pred --cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 554 --EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 554 --~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++++.. ..++|.++..|+.||++||+||| ..+|+||||+
T Consensus 455 ~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLk 496 (635)
T 4fl3_A 455 PLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLA 496 (635)
T ss_dssp EHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred CHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCC
Confidence 8888742 35899999999999999999999 7899999996
No 264
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.50 E-value=2e-14 Score=148.59 Aligned_cols=112 Identities=13% Similarity=0.068 Sum_probs=93.0
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch---hhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET---EELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
.++|.....||+|+||.||+|.. .+|+.||+|.+..... +...+.+|+.+ .++||| ...+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 45677788899999999999985 5789999999976432 24568899988 999999 4667789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++..+ ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 90 E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlK 137 (444)
T 3soa_A 90 DLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLK 137 (444)
T ss_dssp CCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCS
T ss_pred EeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCC
Confidence 999999 6777643 34899999999999999999999 7899999996
No 265
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.49 E-value=4.7e-12 Score=129.28 Aligned_cols=335 Identities=10% Similarity=0.082 Sum_probs=178.2
Q ss_pred ccccccccccCCC-CCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCc---CcccCCcCCCCCCCCCEEeccCCcccc
Q 007553 7 AAELSQLNFTCFP-NLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNR---LTGTIPSEIGSLRDLLELNLSYNILNG 82 (599)
Q Consensus 7 ~~~~~~~~l~~l~-~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~---~~~~~~~~~~~l~~L~~L~L~~n~~~~ 82 (599)
+++|...+|.+++ .|+.+.+.. .++.--..+|.+|++|+.+.+..+. ++..-..+|.++.+|+.+.+..+ ++.
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~--svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~ 127 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPD--TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE 127 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECT--TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE
T ss_pred eeEcCHhhccCCCCcCEEEEECC--CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce
Confidence 5566666676664 467777753 4444444556667777777766542 44444456666666666666554 333
Q ss_pred cCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCCCCcccccC
Q 007553 83 SIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYH 162 (599)
Q Consensus 83 ~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~ 162 (599)
.....|..+.+|+.+.+..+ +..+....|..+.+|+.+.+..+ +..+...+|.+ .+|+.+.+..+-. ......|..
T Consensus 128 I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~-~i~~~af~~ 203 (394)
T 4gt6_A 128 IDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVT-RIGTNAFSE 203 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCC-EECTTTTTT
T ss_pred ehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCccc-ccccchhhh
Confidence 44455666666776666543 22234455666666666666543 33233334433 4566655544321 122334555
Q ss_pred CCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEE
Q 007553 163 LNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLD 242 (599)
Q Consensus 163 l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 242 (599)
+..|.......+.........+........ ....+.....+..+.+.. .+...-..+|..+..|+.+.
T Consensus 204 c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~ 271 (394)
T 4gt6_A 204 CFALSTITSDSESYPAIDNVLYEKSANGDY-----------ALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVK 271 (394)
T ss_dssp CTTCCEEEECCSSSCBSSSCEEEECTTSCE-----------EEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEE
T ss_pred ccccceecccccccccccceeecccccccc-----------cccccccccccceEEcCC-cceEcccceeeecccccEEe
Confidence 555555544333221110000000000000 000111122333444432 22223345677778888887
Q ss_pred ccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCcc
Q 007553 243 LSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSG 322 (599)
Q Consensus 243 l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 322 (599)
+..+... .....|..++.|+.+.+. +.+.......|.++.+|+.+++..+ ++.+-..+|.+|.+|+.+.+..+ ++.
T Consensus 272 lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~ 347 (394)
T 4gt6_A 272 MPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTK 347 (394)
T ss_dssp CCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCB
T ss_pred cccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCE
Confidence 7655432 445567777888888885 3344444566777888888888654 55455567888888888888654 554
Q ss_pred CCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCc
Q 007553 323 SIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNN 367 (599)
Q Consensus 323 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~ 367 (599)
.-..+|.++.+|+.+++.++.... ..+....+|+.+.+..+.
T Consensus 348 I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 348 IPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp CCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred EhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 445678888888888888776542 345556677777766553
No 266
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.49 E-value=1.7e-14 Score=144.39 Aligned_cols=111 Identities=15% Similarity=0.144 Sum_probs=91.8
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch----hhHHHHHHhhc--cc-cccC--------CCCCCccee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET----EELAFLETSST--DF-RHYN--------SHTDNDDSS 546 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~----~~~~f~~e~~~--~l-~H~n--------~~~~~~~lv 546 (599)
++|...+.||+|+||.||+|+.. +|+.||||++..... ....+.+|+.+ ++ +||| ...+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46777888999999999999964 689999999975421 23457778777 55 8999 466788999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++... ..+++.++..++.||+.||+||| ..+|+||||+
T Consensus 89 ~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlk 137 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLK 137 (345)
T ss_dssp ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCC
T ss_pred EeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCC
Confidence 9999999 7777642 24899999999999999999999 7899999996
No 267
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.49 E-value=4.7e-14 Score=136.76 Aligned_cols=112 Identities=15% Similarity=0.051 Sum_probs=94.6
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET--EELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
.++|.....||+|+||.||+|... +|+.||||.+..... ....+.+|+.+ .++||| ..++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 456777888999999999999964 689999999865432 24678889888 899999 45677899999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++.. ...+++.+...++.||++||+||| ..+|+||||+
T Consensus 86 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~ 132 (276)
T 2yex_A 86 YCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIK 132 (276)
T ss_dssp CCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred ecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCC
Confidence 99999 888874 235899999999999999999999 7899999985
No 268
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.49 E-value=3.2e-14 Score=138.35 Aligned_cols=113 Identities=17% Similarity=0.188 Sum_probs=93.3
Q ss_pred hhhccccceecccCCceEEEEEeCC----CCEEEEEEecCCch--hhHHHHHHhhc--cccccC-------CCCCCccee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSS----GRVVALKKLHRSET--EELAFLETSST--DFRHYN-------SHTDNDDSS 546 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~----g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n-------~~~~~~~lv 546 (599)
.++|...+.||+|+||.||+|...+ +..||||.+..... ....|.+|+.+ .++||| ...+..++|
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v 90 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEE
Confidence 4567778889999999999998532 34699999976532 35678899988 999999 455677999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 91 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk 140 (281)
T 3cc6_A 91 MELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIA 140 (281)
T ss_dssp EECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCS
T ss_pred EecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCc
Confidence 9999999 88887532 34899999999999999999999 7899999986
No 269
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.49 E-value=2.3e-14 Score=142.00 Aligned_cols=114 Identities=12% Similarity=0.064 Sum_probs=92.2
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch-hhHHHHHHhhc--cccccC--------C----CCCCccee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET-EELAFLETSST--DFRHYN--------S----HTDNDDSS 546 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~-~~~~f~~e~~~--~l~H~n--------~----~~~~~~lv 546 (599)
++|...+.||+|+||.||++.. .+|+.||||++..... ....+.+|+.+ .++||| . .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4577778899999999999995 5799999999865443 35678899988 999999 1 23467899
Q ss_pred ecccccc--cccccCC-CCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAP-ENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~-~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++... .....+++.++..++.||++||+||| ..+|+||||+
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlk 161 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLK 161 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 9999999 7777642 22356899999999999999999999 7799999996
No 270
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.49 E-value=2.8e-14 Score=150.30 Aligned_cols=114 Identities=16% Similarity=0.192 Sum_probs=94.4
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|...+.||+|+||.||+|+.. +|+.||||++...... ...+..|+.+ +++||| ...+.+++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 45666788999999999999974 6999999999654321 3567888888 999999 4567789999
Q ss_pred cccccc--cccccCCC-CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPE-NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~-~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++.... ....+++.+...++.||+.||+||| ..+|+|||||
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLK 316 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLK 316 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCC
Confidence 999999 77776532 2346899999999999999999999 7899999996
No 271
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.49 E-value=2e-14 Score=139.47 Aligned_cols=112 Identities=14% Similarity=0.045 Sum_probs=94.0
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHhhc--cccccC--------CCCCCcceeecc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET-EELAFLETSST--DFRHYN--------SHTDNDDSSDEH 549 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~-~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~ 549 (599)
.+.|...+.||+|+||.||+|... ++..||+|++..... ....+.+|+.+ +++||| ...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 345777788999999999999964 578999999876432 35678899988 999999 466778999999
Q ss_pred cccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 550 LANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 550 ~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+++| .+++... ..+++.+...|+.|+++||+||| ..+|+||||+
T Consensus 88 ~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlk 133 (277)
T 3f3z_A 88 CTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLK 133 (277)
T ss_dssp CCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCC
Confidence 9999 7777642 34899999999999999999999 7899999986
No 272
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.49 E-value=2.1e-14 Score=139.42 Aligned_cols=112 Identities=21% Similarity=0.210 Sum_probs=93.3
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCCCccee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTDNDDSS 546 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv 546 (599)
.++|.....||+|+||.||+|... +++.||||.+...... ...+.+|+.+ .++||| ...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 456777888999999999999864 5789999998653321 3568888888 899999 456778999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++... ..+++.++..++.||+.||+||| ..+|+||||+
T Consensus 88 ~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlk 136 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH---SKRVIHRDIK 136 (279)
T ss_dssp ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCC
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCC
Confidence 9999999 7777642 34899999999999999999999 7899999986
No 273
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.49 E-value=3e-14 Score=148.79 Aligned_cols=111 Identities=22% Similarity=0.198 Sum_probs=83.2
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC-------C------CCCCc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN-------S------HTDND 543 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n-------~------~~~~~ 543 (599)
++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+ .++||| . ..+..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 4577778899999999999985 478999999986532 224678899998 999999 1 12467
Q ss_pred ceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 544 DSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++||||+.++ .+++... ..+++.++..++.||++||+||| ..+|+|||||
T Consensus 133 ~lv~e~~~~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlK 183 (458)
T 3rp9_A 133 YVVLEIADSDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLK 183 (458)
T ss_dssp EEEECCCSEEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCC
T ss_pred EEEEeccccchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCC
Confidence 9999999877 7777742 35899999999999999999999 7899999997
No 274
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.49 E-value=3.3e-14 Score=142.91 Aligned_cols=112 Identities=16% Similarity=0.165 Sum_probs=94.1
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCchh------------------hHHHHHHhhc--cccccC-----
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETE------------------ELAFLETSST--DFRHYN----- 537 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~------------------~~~f~~e~~~--~l~H~n----- 537 (599)
++|.....||+|+||.||+|.. +|+.||||++...... ...|.+|+.+ +++|||
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4577778899999999999998 8999999998653221 1678999998 999999
Q ss_pred ---CCCCCcceeecccccc--ccc------ccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCC-ccccccccC
Q 007553 538 ---SHTDNDDSSDEHLANN--EHF------LSAPENYERVDFSPDFSIADQSKKGFKLLADRKY-RKSYYQRLY 599 (599)
Q Consensus 538 ---~~~~~~~lv~e~~~~G--~~~------l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~-~~i~Hrdl~ 599 (599)
...+..++||||+++| .++ +... ....+++.++..++.||++||+||| . .+|+||||+
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~ 179 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVK 179 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCC
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCC
Confidence 4567889999999999 888 5432 2456899999999999999999999 5 899999986
No 275
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.49 E-value=3.1e-14 Score=139.10 Aligned_cols=110 Identities=24% Similarity=0.335 Sum_probs=90.2
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCch---hhHHHHHHhhc--cccccC-------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSET---EELAFLETSST--DFRHYN-------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n-------~~~~~~~lv~e~~ 550 (599)
+.|.....||+|+||.||+|... ..||||.+..... ....|.+|+.+ .++||| ...+..++||||+
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~ 101 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWC 101 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred cceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEec
Confidence 34666778999999999999863 4699999875432 24678899998 999999 4566789999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 102 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlk 147 (289)
T 3og7_A 102 EGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLK 147 (289)
T ss_dssp CEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred CCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCc
Confidence 999 78886432 45899999999999999999999 7899999996
No 276
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.48 E-value=1.6e-14 Score=143.81 Aligned_cols=113 Identities=20% Similarity=0.264 Sum_probs=92.9
Q ss_pred HhhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh---hHHHHHHhhc--cccccC--------CCCCCccee
Q 007553 481 ATEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE---ELAFLETSST--DFRHYN--------SHTDNDDSS 546 (599)
Q Consensus 481 at~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~---~~~f~~e~~~--~l~H~n--------~~~~~~~lv 546 (599)
..++|.....||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ +++||| ...+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 455788888999999999999984 57899999999754332 3467788888 999999 466778999
Q ss_pred ecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++. .+++... ..+++.++..|+.||++||+||| ..+|+||||+
T Consensus 112 ~e~~~~~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlk 159 (329)
T 3gbz_A 112 FEYAENDLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLK 159 (329)
T ss_dssp EECCSEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred EecCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCC
Confidence 9999977 8888743 24899999999999999999999 7899999996
No 277
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.48 E-value=8.9e-15 Score=143.96 Aligned_cols=110 Identities=19% Similarity=0.237 Sum_probs=82.7
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc----cccccC--------CCCC----Cccee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST----DFRHYN--------SHTD----NDDSS 546 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~----~l~H~n--------~~~~----~~~lv 546 (599)
++|...+.||+|+||.||+|+. +|+.||||++.... ...+.+|.++ .++||| ...+ ..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-TT--HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEecccc--hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 4567778899999999999987 48999999986543 3445666665 489999 1222 67999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCC-----CccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRK-----YRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~-----~~~i~Hrdl~ 599 (599)
|||+++| .+++... .++|.++..++.|+|.||+|||... ..+|+||||+
T Consensus 80 ~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk 135 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135 (303)
T ss_dssp EECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCC
T ss_pred EeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCC
Confidence 9999999 8888643 3889999999999999999999543 7899999996
No 278
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.48 E-value=2.3e-14 Score=140.91 Aligned_cols=113 Identities=16% Similarity=0.172 Sum_probs=94.7
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cccccC-C-------------------
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DFRHYN-S------------------- 538 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n-~------------------- 538 (599)
.++|.....||+|+||.||+|.. .+|+.||||++.........+.+|+.+ .++||| .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45677788999999999999995 479999999997654445778899988 999999 0
Q ss_pred -CCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 539 -HTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 539 -~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..+..++||||+++| .+++.... ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlk 143 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLK 143 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHH---hCCeecccCC
Confidence 135678999999999 88887532 34788999999999999999999 7799999986
No 279
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.48 E-value=2.9e-14 Score=141.51 Aligned_cols=111 Identities=18% Similarity=0.160 Sum_probs=93.9
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch-------hhHHHHHHhhc--cccccC--------CCCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET-------EELAFLETSST--DFRHYN--------SHTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~-------~~~~f~~e~~~--~l~H~n--------~~~~~~~ 544 (599)
+.|...+.||+|+||.||+|... +|+.||||.+..... ...++.+|+.+ .++||| ...+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 45777788999999999999964 689999999865422 14568899988 999999 4567789
Q ss_pred eeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++| .+++..+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 92 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dik 142 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLK 142 (321)
T ss_dssp EEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred EEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 999999999 8888742 35899999999999999999999 7899999986
No 280
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.48 E-value=1.6e-14 Score=146.66 Aligned_cols=112 Identities=14% Similarity=0.132 Sum_probs=91.7
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh----hHHHHHHhhc--cc-cccC--------CCCCCcce
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE----ELAFLETSST--DF-RHYN--------SHTDNDDS 545 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~----~~~f~~e~~~--~l-~H~n--------~~~~~~~l 545 (599)
.++|...+.||+|+||.||+|+.. +++.||||++...... ...+..|..+ ++ +||| ...+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457888889999999999999964 5889999999754221 2346677776 44 8999 46677899
Q ss_pred eecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||||+++| .+++... ..+++.++..++.||+.||+||| ..+|+|||||
T Consensus 131 V~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLK 180 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLK 180 (396)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCC
T ss_pred EEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCC
Confidence 99999999 7777642 34899999999999999999999 7899999996
No 281
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.48 E-value=3.1e-14 Score=141.48 Aligned_cols=104 Identities=12% Similarity=0.019 Sum_probs=87.5
Q ss_pred cceecccCCceEEEEEeC-CCCEEEEEEecCCchhhHHHHHHhhc--ccc-ccC--------CCCCCcceeecccccc--
Q 007553 488 KYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETEELAFLETSST--DFR-HYN--------SHTDNDDSSDEHLANN-- 553 (599)
Q Consensus 488 ~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~~~~f~~e~~~--~l~-H~n--------~~~~~~~lv~e~~~~G-- 553 (599)
.+.||+|+||.||+|... +|+.||||++... ....+.+|+.+ .+. ||| ...+..++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 367999999999999964 6899999999653 23456678877 665 999 4667789999999999
Q ss_pred cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 554 EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 554 ~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+++..+ ..+++.++..|+.||++||+||| ..+|+||||+
T Consensus 94 ~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlk 133 (325)
T 3kn6_A 94 FERIKKK---KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLK 133 (325)
T ss_dssp HHHHHHC---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred HHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCC
Confidence 8888743 35899999999999999999999 7899999996
No 282
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.48 E-value=3.8e-14 Score=147.64 Aligned_cols=109 Identities=22% Similarity=0.116 Sum_probs=89.8
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC--------CCC------CC
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN--------SHT------DN 542 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n--------~~~------~~ 542 (599)
++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+ .++||| ... ..
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 4577778899999999999984 468999999997542 224678889988 899999 111 34
Q ss_pred cceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++|||||++| .+++.. .+++.++..++.||++||+||| ..+|+|||||
T Consensus 142 ~~lv~E~~~~~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlk 191 (464)
T 3ttj_A 142 VYLVMELMDANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLK 191 (464)
T ss_dssp EEEEEECCSEEHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred EEEEEeCCCCCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCC
Confidence 59999999999 666653 2899999999999999999999 7799999996
No 283
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.48 E-value=3.5e-14 Score=142.49 Aligned_cols=114 Identities=17% Similarity=0.204 Sum_probs=89.6
Q ss_pred HhhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh------hHHHHHHhhc--cccccC--------CCCCCc
Q 007553 481 ATEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE------ELAFLETSST--DFRHYN--------SHTDND 543 (599)
Q Consensus 481 at~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~------~~~f~~e~~~--~l~H~n--------~~~~~~ 543 (599)
..+.|.....||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ .++||| ...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 345677788899999999999996 46899999998653221 2468889988 999999 467788
Q ss_pred ceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 544 DSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++||||++++ .+++... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 88 ~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlk 139 (346)
T 1ua2_A 88 SLVFDFMETDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLK 139 (346)
T ss_dssp EEEEECCSEEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred EEEEEcCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCC
Confidence 9999999988 7777753 245899999999999999999999 7899999996
No 284
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.48 E-value=2.1e-14 Score=145.01 Aligned_cols=112 Identities=19% Similarity=0.171 Sum_probs=86.3
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch----hhHHHHHHhhc---cccccC--------CCCCCcce
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET----EELAFLETSST---DFRHYN--------SHTDNDDS 545 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~----~~~~f~~e~~~---~l~H~n--------~~~~~~~l 545 (599)
.++|...+.||+|+||.||+|+.. +++.||||++..... ....+..|..+ .++||| ...+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 356888889999999999999964 588999999965432 13345566554 789999 46678899
Q ss_pred eecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||||+++| .++++.. ..+++.+...++.||+.||+||| ..+|+||||+
T Consensus 117 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlk 166 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLK 166 (373)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCC
Confidence 99999999 7777642 24788999999999999999999 7899999996
No 285
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.48 E-value=3.5e-14 Score=140.25 Aligned_cols=111 Identities=20% Similarity=0.196 Sum_probs=91.8
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh---hHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE---ELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~---~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
++|...+.||+|+||.||+|... +|+.||||++...... ...+.+|+.+ +++||| ...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 34666788999999999999964 5899999998654322 4568889988 999999 45677899999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++.. ...+++.+...++.|+++||+||| ..+|+||||+
T Consensus 83 ~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlk 129 (311)
T 4agu_A 83 YCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVK 129 (311)
T ss_dssp CCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCC
Confidence 99999 666653 234899999999999999999999 7899999996
No 286
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.48 E-value=3.4e-14 Score=138.27 Aligned_cols=111 Identities=15% Similarity=0.190 Sum_probs=93.6
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch-------hhHHHHHHhhc--cccccC--------CCCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET-------EELAFLETSST--DFRHYN--------SHTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~-------~~~~f~~e~~~--~l~H~n--------~~~~~~~ 544 (599)
++|.....||+|+||.||+|... +|+.||||.+..... ....+.+|+.+ .++||| ...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 45777788999999999999975 689999999865421 14678899988 999999 4567789
Q ss_pred eeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++| .+++..+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~ 135 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLK 135 (283)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCC
Confidence 999999999 8888642 34899999999999999999999 7899999986
No 287
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.47 E-value=1.6e-14 Score=144.00 Aligned_cols=110 Identities=14% Similarity=0.112 Sum_probs=90.5
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cc-cccC--------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DF-RHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l-~H~n--------~~~~~~~lv~e~~ 550 (599)
++|...+.||+|+||.||+|.. .+|+.||||.+..... ...+.+|+.+ .+ +||| ..++..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 4577778899999999999995 5789999999865432 3457788887 88 9999 4567789999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+| .+++... ...+++.++..|+.||++||+||| ..+|+||||+
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlk 132 (330)
T 2izr_A 88 -GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVK 132 (330)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred -CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCC
Confidence 66 8888753 235999999999999999999999 7799999996
No 288
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.47 E-value=3.4e-14 Score=139.71 Aligned_cols=112 Identities=16% Similarity=0.182 Sum_probs=91.4
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh-hHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE-ELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
+.|.....||+|+||.||+|... +|+.||+|.+...... ...|.+|+.+ .++||| ...+..++||||+
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 45666778999999999999975 5899999998765433 5678899988 899999 4567889999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 99 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk 144 (302)
T 2j7t_A 99 PGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLK 144 (302)
T ss_dssp TTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCS
T ss_pred CCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCC
Confidence 999 77776422 34899999999999999999999 7799999986
No 289
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.47 E-value=1.7e-14 Score=143.48 Aligned_cols=111 Identities=17% Similarity=0.136 Sum_probs=91.8
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|...+.||+|+||.||+|.. .+|+.||||.+...... ...+.+|+.+ .++||| ...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4566678899999999999995 57899999998653221 3468889988 999999 4567789999
Q ss_pred cccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+.++ .+++..+ ..+++.++..++.||+.||+||| ..+|+||||+
T Consensus 89 E~~~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlk 135 (336)
T 3h4j_B 89 EYAGGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLK 135 (336)
T ss_dssp CCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCS
T ss_pred ECCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCc
Confidence 999544 7777642 34899999999999999999999 7899999996
No 290
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.47 E-value=2.8e-14 Score=142.59 Aligned_cols=109 Identities=16% Similarity=0.130 Sum_probs=89.4
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchhhHHHHHHhhc--cc-cccC--------CCCCCcceeecc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETEELAFLETSST--DF-RHYN--------SHTDNDDSSDEH 549 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~~~~f~~e~~~--~l-~H~n--------~~~~~~~lv~e~ 549 (599)
.++|.....||+|+||.||+|... +|+.||||.+...... +.+|+++ ++ +||| .+++..++||||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD---PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC---CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC---hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 456777788999999999999964 6899999999764322 3346655 55 8999 466778999999
Q ss_pred cccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 550 LANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 550 ~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+++| .+++..+ ..+++.+...++.||+.||+||| ..+|+||||+
T Consensus 98 ~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlk 143 (342)
T 2qr7_A 98 MKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLK 143 (342)
T ss_dssp CCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred CCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCC
Confidence 9999 7777642 34899999999999999999999 7899999996
No 291
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.47 E-value=3.2e-14 Score=140.94 Aligned_cols=106 Identities=10% Similarity=0.067 Sum_probs=89.3
Q ss_pred cceecccCCceEEEEEe-CCCCEEEEEEecCCchh-hHHHHHHhhc--c-ccccC--------CCCCCcceeecccccc-
Q 007553 488 KYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE-ELAFLETSST--D-FRHYN--------SHTDNDDSSDEHLANN- 553 (599)
Q Consensus 488 ~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~-~~~f~~e~~~--~-l~H~n--------~~~~~~~lv~e~~~~G- 553 (599)
.+.||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ + .+||| ...+..++||||+++|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 35699999999999984 57999999999765433 5678889887 5 58999 4567889999999999
Q ss_pred -cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 554 -EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 554 -~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+++... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 98 L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlk 138 (316)
T 2ac3_A 98 ILSHIHKR---RHFNELEASVVVQDVASALDFLH---NKGIAHRDLK 138 (316)
T ss_dssp HHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred HHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCC
Confidence 8888742 34899999999999999999999 7799999996
No 292
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.47 E-value=2.2e-14 Score=143.75 Aligned_cols=112 Identities=15% Similarity=0.135 Sum_probs=92.0
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch----hhHHHHHHhhc--cc-cccC--------CCCCCcce
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET----EELAFLETSST--DF-RHYN--------SHTDNDDS 545 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~----~~~~f~~e~~~--~l-~H~n--------~~~~~~~l 545 (599)
.++|.....||+|+||.||+|... +|+.||||++..... ....+..|..+ .+ +||+ ...+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 457888889999999999999975 478999999975421 13456777776 44 8998 45677899
Q ss_pred eecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||||+++| .+++... ..+++.++..++.||+.||+||| ..+|+||||+
T Consensus 99 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlk 148 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLK 148 (353)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCC
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCC
Confidence 99999999 7788742 24899999999999999999999 7899999996
No 293
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.47 E-value=3.1e-14 Score=141.44 Aligned_cols=116 Identities=22% Similarity=0.263 Sum_probs=86.1
Q ss_pred HhhhccccceecccCCceEEEEEeCC-C---CEEEEEEecCCc---hhhHHHHHHhhc--cccccC--------CCCCC-
Q 007553 481 ATEDFHIKYCIGTGGYGSVYRAQLSS-G---RVVALKKLHRSE---TEELAFLETSST--DFRHYN--------SHTDN- 542 (599)
Q Consensus 481 at~~~~~~~~lg~g~~g~v~~~~~~~-g---~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n--------~~~~~- 542 (599)
..++|...+.||+|+||.||+|.... + ..||||.+.... .....|.+|+.+ +++||| ...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34567778899999999999999643 3 279999997642 235678999998 999999 12222
Q ss_pred -----cceeecccccc--cccccCCC---CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 -----DDSSDEHLANN--EHFLSAPE---NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 -----~~lv~e~~~~G--~~~l~~~~---~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++||||+++| .+++.... ....+++.++..|+.||++||+||| ..+|+||||+
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dik 164 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLA 164 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCC
Confidence 28999999999 77776421 2235899999999999999999999 7899999996
No 294
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.47 E-value=5.5e-14 Score=136.23 Aligned_cols=110 Identities=17% Similarity=0.152 Sum_probs=82.2
Q ss_pred hccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 484 DFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
+|...+.||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ .++||| ...+..++|||
T Consensus 14 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (275)
T 2eue_A 14 NYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEeh
Confidence 566677899999999999985 57899999999754321 4568889888 999999 45677899999
Q ss_pred ccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+.++ .+++..+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 94 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dik 139 (275)
T 2eue_A 94 YAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLK 139 (275)
T ss_dssp CCCEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCS
T ss_pred hcCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCC
Confidence 99666 7777643 34899999999999999999999 7899999986
No 295
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.47 E-value=1e-13 Score=136.05 Aligned_cols=109 Identities=23% Similarity=0.289 Sum_probs=87.8
Q ss_pred cccceecccCCceEEEEEeC-CC---CEEEEEEecCCch--hhHHHHHHhhc--cccccC--------CCCCC-cceeec
Q 007553 486 HIKYCIGTGGYGSVYRAQLS-SG---RVVALKKLHRSET--EELAFLETSST--DFRHYN--------SHTDN-DDSSDE 548 (599)
Q Consensus 486 ~~~~~lg~g~~g~v~~~~~~-~g---~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~~~~~-~~lv~e 548 (599)
...+.||+|+||.||+|... ++ ..||+|.+..... ....|.+|+.+ +++||| ...+. .++|||
T Consensus 24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 103 (298)
T 3pls_A 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP 103 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence 34577999999999999852 33 3799999976433 24678899988 999999 23333 489999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 104 ~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dik 151 (298)
T 3pls_A 104 YMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLA 151 (298)
T ss_dssp CCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred cccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 99999 8888753 345899999999999999999999 7799999996
No 296
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=2.9e-13 Score=120.47 Aligned_cols=107 Identities=31% Similarity=0.312 Sum_probs=74.2
Q ss_pred CCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeec
Q 007553 46 LKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSL 125 (599)
Q Consensus 46 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~ 125 (599)
.+++++++|.++ .+|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|++++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 467777777776 455544 36777777777777766666777777777777777777766555667777777777777
Q ss_pred ccccccCCccccCCCcccEEecccCccCCC
Q 007553 126 NQLSGRLPQEVGNLKNLVSLFLDNNNLTGP 155 (599)
Q Consensus 126 n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~ 155 (599)
|.+++..++.+.++++|++|++++|.+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 777766555677777777777777766543
No 297
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.46 E-value=1.6e-14 Score=143.68 Aligned_cols=111 Identities=14% Similarity=0.121 Sum_probs=89.1
Q ss_pred hccccceecccCCceEEEEEe-CCCCE----EEEEEecCCchh--hHHHHHHhhc--cccccC-------CCCCCcceee
Q 007553 484 DFHIKYCIGTGGYGSVYRAQL-SSGRV----VALKKLHRSETE--ELAFLETSST--DFRHYN-------SHTDNDDSSD 547 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~-~~g~~----vavK~l~~~~~~--~~~f~~e~~~--~l~H~n-------~~~~~~~lv~ 547 (599)
+|.....||+|+||.||+|.. .+|+. ||+|.+...... ...+.+|+.+ .++||| ...+..++||
T Consensus 14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~ 93 (325)
T 3kex_A 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVT 93 (325)
T ss_dssp TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEEE
T ss_pred HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEEE
Confidence 466677899999999999995 34543 888887543321 3456778777 899999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dik 142 (325)
T 3kex_A 94 QYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLA 142 (325)
T ss_dssp ECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred EeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccc
Confidence 999999 77887532 35899999999999999999999 7799999996
No 298
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.46 E-value=5.6e-14 Score=138.24 Aligned_cols=109 Identities=19% Similarity=0.161 Sum_probs=92.5
Q ss_pred hccccceecccCCceEEEEEe-CCCCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 484 DFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET--EELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
.|...+.||+|+||.||+|.. .+|+.||||.+..... ....+.+|+.+ .++||| ...+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 466677899999999999985 4689999999975432 24678889988 899999 3567789999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++.. ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 103 ~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~ 146 (303)
T 3a7i_A 103 GGGSALDLLEP----GPLDETQIATILREILKGLDYLH---SEKKIHRDIK 146 (303)
T ss_dssp TTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCC
Confidence 999 778764 24899999999999999999999 7799999986
No 299
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.46 E-value=4.1e-14 Score=140.49 Aligned_cols=112 Identities=13% Similarity=0.069 Sum_probs=90.5
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch---------hhHHHHHHhhc--cccccC-------CCCCC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET---------EELAFLETSST--DFRHYN-------SHTDN 542 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~---------~~~~f~~e~~~--~l~H~n-------~~~~~ 542 (599)
.++|.....||+|+||.||+|.. .+|+.||||.+..... ....+.+|+.+ +++||| ...+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 35677788899999999999986 4688999999865321 12357889988 999999 34455
Q ss_pred cceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++||||+++| .+++.. ...+++.+...++.||++||+||| ..+|+||||+
T Consensus 89 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlk 141 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLK 141 (322)
T ss_dssp EEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCC
Confidence 89999999999 777764 235899999999999999999999 7899999986
No 300
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.46 E-value=5.1e-14 Score=142.20 Aligned_cols=116 Identities=14% Similarity=0.071 Sum_probs=93.1
Q ss_pred HHHhhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cc-----cccC--------CCCCC
Q 007553 479 IQATEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DF-----RHYN--------SHTDN 542 (599)
Q Consensus 479 ~~at~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l-----~H~n--------~~~~~ 542 (599)
....++|...+.||+|+||.||+|.. .+|+.||||++.........+..|+.+ .+ +||| ...+.
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~ 110 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH 110 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence 33456788888999999999999996 568999999997654444556666665 44 4999 35677
Q ss_pred cceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++||||+ +| .+++.... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlk 164 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLK 164 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred eEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCC
Confidence 89999999 55 78887532 235899999999999999999999 7899999996
No 301
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.46 E-value=3.8e-14 Score=138.48 Aligned_cols=115 Identities=15% Similarity=0.170 Sum_probs=88.8
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh--hHHHH-HHhhc--cccccC--------CCCCCcceee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE--ELAFL-ETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~--~~~f~-~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
.++|.....||+|+||.||+|.. .+|+.||||++...... ..++. ++... .++||| ..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 35677788899999999999996 57899999999764322 23333 33333 889999 4677889999
Q ss_pred cccccc-cccccCC-CCCCCCChHHHHHHHHHHHHHHhhhhCCCCc-cccccccC
Q 007553 548 EHLANN-EHFLSAP-ENYERVDFSPDFSIADQSKKGFKLLADRKYR-KSYYQRLY 599 (599)
Q Consensus 548 e~~~~G-~~~l~~~-~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~-~i~Hrdl~ 599 (599)
||++++ .+++... .....++|.++..|+.||++||+||| .. +|+||||+
T Consensus 86 e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlk 137 (290)
T 3fme_A 86 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVK 137 (290)
T ss_dssp ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCS
T ss_pred ehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCC
Confidence 999977 7776541 12345899999999999999999999 66 99999996
No 302
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.46 E-value=5.7e-14 Score=145.30 Aligned_cols=111 Identities=19% Similarity=0.137 Sum_probs=92.2
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch---hhHHHHHHhhc--cccccC--------CCC-----CCc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET---EELAFLETSST--DFRHYN--------SHT-----DND 543 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n--------~~~-----~~~ 543 (599)
++|...+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+ .++||| ... +..
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 4577778899999999999985 4688999999975422 24678899998 999999 112 568
Q ss_pred ceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 544 DSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++|||||++. .+++.. ...+++.++..++.||++||+||| ..+|+|||||
T Consensus 106 ~lv~e~~~~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlk 156 (432)
T 3n9x_A 106 YIVLEIADSDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLK 156 (432)
T ss_dssp EEEEECCSEEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred EEEEecCCcCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCC
Confidence 9999999977 888874 235899999999999999999999 7799999996
No 303
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.46 E-value=3.5e-14 Score=142.17 Aligned_cols=115 Identities=16% Similarity=0.161 Sum_probs=91.2
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHhhc---cccccC--------CCCCCcceee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE--TEELAFLETSST---DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~--~~~~~f~~e~~~---~l~H~n--------~~~~~~~lv~ 547 (599)
.++|.....||+|+||.||+|.. .+|+.||||++.... ....++..|+.. .++||| ...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 34566678899999999999995 579999999997643 223445555543 889999 4567889999
Q ss_pred cccccc-cccccCC-CCCCCCChHHHHHHHHHHHHHHhhhhCCCCc-cccccccC
Q 007553 548 EHLANN-EHFLSAP-ENYERVDFSPDFSIADQSKKGFKLLADRKYR-KSYYQRLY 599 (599)
Q Consensus 548 e~~~~G-~~~l~~~-~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~-~i~Hrdl~ 599 (599)
||++++ .+++... .....++|..+..|+.||++||+||| .. +|+||||+
T Consensus 130 e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlk 181 (340)
T 3an0_A 130 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVK 181 (340)
T ss_dssp CCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCC
T ss_pred HHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCC
Confidence 999977 7777631 12345899999999999999999999 65 99999996
No 304
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.46 E-value=6.4e-14 Score=137.98 Aligned_cols=113 Identities=16% Similarity=0.134 Sum_probs=91.9
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc-----hhhHHHHHHhhc--cccccC----------CCCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE-----TEELAFLETSST--DFRHYN----------SHTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~-----~~~~~f~~e~~~--~l~H~n----------~~~~~~~ 544 (599)
++|.....||+|+||.||++.. .+|+.||||.+.... .....+.+|+.+ .++||| ...+..+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 4577778899999999999996 468999999996542 124678899988 999999 2345679
Q ss_pred eeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++| .+++.... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 85 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlk 136 (305)
T 2wtk_C 85 MVMEYCVCGMQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIK 136 (305)
T ss_dssp EEEECCSEEHHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EEehhccCCHHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCC
Confidence 999999999 77776432 345899999999999999999999 7799999986
No 305
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.46 E-value=1.7e-14 Score=143.31 Aligned_cols=111 Identities=19% Similarity=0.234 Sum_probs=90.0
Q ss_pred hccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
+|...+.||+|+||.||+|... +|+.||||++...... ...+.+|+.+ .++||| ...+..++||||+
T Consensus 3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (324)
T 3mtl_A 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL 82 (324)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccc
Confidence 4666778999999999999964 7899999999754332 2245567777 999999 4677789999999
Q ss_pred ccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+++ .+++.... ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 83 ~~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dik 127 (324)
T 3mtl_A 83 DKDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLK 127 (324)
T ss_dssp SEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCC
T ss_pred ccCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcC
Confidence 977 88887532 35899999999999999999999 7899999996
No 306
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.46 E-value=6e-14 Score=141.68 Aligned_cols=111 Identities=18% Similarity=0.190 Sum_probs=93.7
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------CCCCCcceeecc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------SHTDNDDSSDEH 549 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~ 549 (599)
++|.....||+|+||.||+|... +|+.||+|++...... ...+.+|+.+ .++||| ...+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 45777788999999999999964 6899999999765322 4678899988 899999 456778999999
Q ss_pred cccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCc-cccccccC
Q 007553 550 LANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYR-KSYYQRLY 599 (599)
Q Consensus 550 ~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~-~i~Hrdl~ 599 (599)
+++| .+++... ..+++.....++.||++||+||| .. +|+||||+
T Consensus 113 ~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlk 159 (360)
T 3eqc_A 113 MDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVK 159 (360)
T ss_dssp CTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCS
T ss_pred CCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCcc
Confidence 9999 8888742 24899999999999999999999 54 89999996
No 307
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.46 E-value=4.1e-14 Score=139.21 Aligned_cols=115 Identities=17% Similarity=0.160 Sum_probs=80.7
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET--EELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ...++.+|+.+ +++||| ...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 34677778899999999999985 4689999999865432 24568889888 999999 45677899999
Q ss_pred ccccc--cccccC-----CCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSA-----PENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~-----~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++.. ......+++.++..++.||++||+||| ..+|+||||+
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~ 148 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVK 148 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCS
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCC
Confidence 99999 777763 112345899999999999999999999 7799999986
No 308
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.46 E-value=4.4e-14 Score=149.25 Aligned_cols=112 Identities=16% Similarity=0.127 Sum_probs=90.7
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch--------------hhHHHHHHhhc--cccccC-------
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET--------------EELAFLETSST--DFRHYN------- 537 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~--------------~~~~f~~e~~~--~l~H~n------- 537 (599)
.+.|...+.||+|+||.||+|... +++.||||.+..... ....+.+|+.+ +++|||
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 356777788999999999999964 688999999865421 13568889988 999999
Q ss_pred -CCCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 538 -SHTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 538 -~~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
...+..++||||+++| .+++..+ ..+++.++..|+.||+.||+||| ..+|+||||+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlk 173 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLH---KHNIVHRDIK 173 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCc
Confidence 4667789999999999 7777642 34899999999999999999999 7899999996
No 309
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.46 E-value=7.5e-14 Score=141.04 Aligned_cols=116 Identities=14% Similarity=0.071 Sum_probs=95.0
Q ss_pred HHHHhhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch-----h----hHHHHHHhhc--cc-cccC-------
Q 007553 478 MIQATEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET-----E----ELAFLETSST--DF-RHYN------- 537 (599)
Q Consensus 478 l~~at~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~-----~----~~~f~~e~~~--~l-~H~n------- 537 (599)
.....++|.....||+|+||.||+|... +|+.||||++..... . ...+.+|+.+ ++ +|||
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3444567888889999999999999974 799999999865431 1 2457778887 77 8999
Q ss_pred -CCCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 538 -SHTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 538 -~~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
...+..++||||+++| .+++..+ ..+++..+..++.||++||+||| ..+|+||||+
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlk 227 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLK 227 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 3567789999999999 8888742 34899999999999999999999 6799999986
No 310
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.46 E-value=4.1e-14 Score=144.64 Aligned_cols=103 Identities=12% Similarity=-0.042 Sum_probs=83.8
Q ss_pred ceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc---cccccC------------CCCCCcceeeccccc
Q 007553 489 YCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST---DFRHYN------------SHTDNDDSSDEHLAN 552 (599)
Q Consensus 489 ~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~---~l~H~n------------~~~~~~~lv~e~~~~ 552 (599)
..||+|+||.||+|.. .+|+.||||++... ..+.+|+.+ ..+||| ...+.+++|||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 5799999999999986 46899999999643 335566665 568999 124568999999999
Q ss_pred c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 553 N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 553 G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
| .+++..+. ...++|.++..|+.||++||+||| ..+|+||||+
T Consensus 144 g~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlk 188 (400)
T 1nxk_A 144 GELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 188 (400)
T ss_dssp EEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred CcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcC
Confidence 9 88887532 345899999999999999999999 7899999996
No 311
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.46 E-value=4.2e-14 Score=137.32 Aligned_cols=118 Identities=18% Similarity=0.251 Sum_probs=92.2
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC----------CCCCCcce
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSE---TEELAFLETSST--DFRHYN----------SHTDNDDS 545 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n----------~~~~~~~l 545 (599)
.++|.....||+|+||.||+|... +|+.||+|.+.... .....+.+|+.+ +++||| ...+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 356777788999999999999964 68999999997543 224678889988 999999 13456899
Q ss_pred eecccccc--cccccCCC-CCCCCChHHHHHHHHHHHHHHhhhhCCC--CccccccccC
Q 007553 546 SDEHLANN--EHFLSAPE-NYERVDFSPDFSIADQSKKGFKLLADRK--YRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~-~~~~l~~~~~~~ia~~ia~gl~yLH~~~--~~~i~Hrdl~ 599 (599)
||||+++| .+++.... ....+++.++..++.||++||+|||+.. ..+|+||||+
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~ 143 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCS
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccc
Confidence 99999999 88887522 2345899999999999999999999322 1239999986
No 312
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.46 E-value=4.4e-14 Score=137.56 Aligned_cols=111 Identities=13% Similarity=0.091 Sum_probs=92.4
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+ +++||| ...+..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 4577778899999999999986 468999999986543 224568889888 999999 45667799999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++..+ ..+++.+...++.||+.||+||| ..+|+||||+
T Consensus 86 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dik 132 (284)
T 3kk8_A 86 LVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCH---SNGIVHRNLK 132 (284)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred cCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCC
Confidence 99999 6677642 34899999999999999999999 7899999986
No 313
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.45 E-value=8e-14 Score=146.66 Aligned_cols=111 Identities=16% Similarity=0.195 Sum_probs=93.8
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCc----hhhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSE----TEELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~----~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
+.|...+.||+|+||.||+|... +|+.||||++.... .....+.+|+.+ +++||| ...+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45777788999999999999964 78999999986532 225678899998 999999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++..+ ..+++.++..|+.||++||+||| ..+|+||||+
T Consensus 106 e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlk 153 (484)
T 3nyv_A 106 EVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLK 153 (484)
T ss_dssp CCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred ecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCC
Confidence 999999 7777642 34899999999999999999999 7799999996
No 314
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.45 E-value=5.4e-14 Score=138.42 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=91.6
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET-EELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~-~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
+.|.....||+|+||.||++... +|+.||||.+..... ....+.+|+.+ .++||| ...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 46777788999999999999964 799999999976543 24568889988 999999 4567789999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++... ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 89 ~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dik 133 (304)
T 2jam_A 89 SGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLK 133 (304)
T ss_dssp CSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCC
T ss_pred CCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCC
Confidence 999 7777642 24899999999999999999999 7799999986
No 315
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.45 E-value=7.7e-14 Score=151.36 Aligned_cols=113 Identities=19% Similarity=0.244 Sum_probs=93.8
Q ss_pred hhhccccceecccCCceEEEEEeC----CCCEEEEEEecCCchh--hHHHHHHhhc--cccccC-------CCCCCccee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS----SGRVVALKKLHRSETE--ELAFLETSST--DFRHYN-------SHTDNDDSS 546 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~----~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n-------~~~~~~~lv 546 (599)
.++|...+.||+|+||.||+|... .+..||||++...... ...|.+|+.+ +++||| ...+..++|
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv 468 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 468 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEE
Confidence 355666788999999999999863 2457999998764332 4678999988 999999 456678999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .++++.+. ..++|.++..++.||++||+||| ..+|+||||+
T Consensus 469 ~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDik 518 (656)
T 2j0j_A 469 MELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIA 518 (656)
T ss_dssp EECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred EEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccc
Confidence 9999999 88887532 34899999999999999999999 7799999996
No 316
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.45 E-value=1.5e-14 Score=143.92 Aligned_cols=120 Identities=17% Similarity=0.221 Sum_probs=98.6
Q ss_pred HHHHHHhhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cc-cccC--------CC----
Q 007553 476 EEMIQATEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DF-RHYN--------SH---- 539 (599)
Q Consensus 476 ~~l~~at~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l-~H~n--------~~---- 539 (599)
.++....+.|...+.||+|+||.||+|.. .+|+.||||.+.........+.+|+.+ ++ +||| ..
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 34444567788888999999999999996 478999999997765556778889887 66 8999 11
Q ss_pred --CCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 540 --TDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 540 --~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+..++||||+++| .+++.... ...+++.....++.||+.||+||| ..+|+||||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlk 156 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIK 156 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCS
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCc
Confidence 46789999999999 88887532 235889999999999999999999 7799999986
No 317
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.45 E-value=5.7e-14 Score=140.74 Aligned_cols=110 Identities=13% Similarity=0.067 Sum_probs=90.4
Q ss_pred hccccceecccCCceEEEEEeCCCCEEEEEEecCCch---hhHHHHHHhhc--cccc--cC--------CCCCCcceeec
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSET---EELAFLETSST--DFRH--YN--------SHTDNDDSSDE 548 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H--~n--------~~~~~~~lv~e 548 (599)
.|...+.||+|+||.||++...+++.||||++..... ....|.+|+.+ .++| || ...+..++|||
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e 89 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 89 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe
Confidence 4666788999999999999988899999999865432 24678889988 7877 77 46677899999
Q ss_pred ccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|..+. .+++..+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 90 ~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDik 135 (343)
T 3dbq_A 90 CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLK 135 (343)
T ss_dssp CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 64433 8888753 35899999999999999999999 7899999996
No 318
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.45 E-value=3.8e-14 Score=137.61 Aligned_cols=112 Identities=19% Similarity=0.227 Sum_probs=91.2
Q ss_pred hhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC---------CCCCCcceeeccc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN---------SHTDNDDSSDEHL 550 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n---------~~~~~~~lv~e~~ 550 (599)
.++|.....||+|+||.||+|.. .|+.||||.+.... ....|.+|+.+ +++||| ...+..++||||+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 35677778899999999999997 48999999997543 34678899988 999999 2334689999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++.... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 98 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk 144 (278)
T 1byg_A 98 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLA 144 (278)
T ss_dssp TTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred CCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCC
Confidence 999 88887421 223789999999999999999999 7899999986
No 319
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.45 E-value=7.6e-14 Score=140.39 Aligned_cols=112 Identities=18% Similarity=0.211 Sum_probs=91.6
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh---hHHHHHHhhc--cccccC--------CC--------C
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE---ELAFLETSST--DFRHYN--------SH--------T 540 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~---~~~f~~e~~~--~l~H~n--------~~--------~ 540 (599)
++|...+.||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ .++||| .. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 4677778899999999999996 57899999998654322 4578889988 899999 11 4
Q ss_pred CCcceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 541 DNDDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 541 ~~~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+..++||||++++ .+++.... ..+++.++..|+.||++||+||| ..+|+||||+
T Consensus 97 ~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlk 151 (351)
T 3mi9_A 97 GSIYLVFDFCEHDLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMK 151 (351)
T ss_dssp CEEEEEEECCSEEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred ceEEEEEeccCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCC
Confidence 4679999999988 66666432 34899999999999999999999 7899999996
No 320
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.45 E-value=6.6e-14 Score=142.87 Aligned_cols=111 Identities=17% Similarity=0.195 Sum_probs=83.3
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHhhc--ccc-ccC----------CCCCCcc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE---TEELAFLETSST--DFR-HYN----------SHTDNDD 544 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~-H~n----------~~~~~~~ 544 (599)
.++|.....||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+ .+. ||| ......+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 45677778899999999999985 579999999986432 224567788887 776 999 1334689
Q ss_pred eeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+|||||+++ .+++... .+++..+..++.||++||+||| ..+|+||||+
T Consensus 88 lv~e~~~~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlk 136 (388)
T 3oz6_A 88 LVFDYMETDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMK 136 (388)
T ss_dssp EEEECCSEEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred EEecccCcCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCC
Confidence 999999977 8888742 4899999999999999999999 7899999996
No 321
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.45 E-value=6.4e-14 Score=136.98 Aligned_cols=111 Identities=15% Similarity=0.183 Sum_probs=89.6
Q ss_pred hhccccc-eecccCCceEEEEEe---CCCCEEEEEEecCCchh---hHHHHHHhhc--cccccC-------CCCCCccee
Q 007553 483 EDFHIKY-CIGTGGYGSVYRAQL---SSGRVVALKKLHRSETE---ELAFLETSST--DFRHYN-------SHTDNDDSS 546 (599)
Q Consensus 483 ~~~~~~~-~lg~g~~g~v~~~~~---~~g~~vavK~l~~~~~~---~~~f~~e~~~--~l~H~n-------~~~~~~~lv 546 (599)
..|.... .||+|+||.||+|.. .+++.||||++...... ..+|.+|+.+ .++||| ...+..++|
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv 95 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLV 95 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEE
Confidence 3455455 899999999999964 34688999999764322 4678899988 999999 456778999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 96 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dik 144 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLA 144 (291)
T ss_dssp EECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCC
Confidence 9999999 8888752 34899999999999999999999 7799999986
No 322
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.45 E-value=6.9e-14 Score=139.44 Aligned_cols=111 Identities=18% Similarity=0.217 Sum_probs=91.4
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh---hHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE---ELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~---~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
++|.....||+|+||.||+|... +|+.||||++...... ...+.+|+.+ .++||| ...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 45667788999999999999964 5899999998654322 4567889888 999999 45677899999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++.. ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 105 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlk 151 (331)
T 4aaa_A 105 FVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIK 151 (331)
T ss_dssp CCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred cCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcC
Confidence 99999 555442 234899999999999999999999 7899999996
No 323
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.45 E-value=6.9e-14 Score=138.10 Aligned_cols=114 Identities=18% Similarity=0.197 Sum_probs=92.7
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc----hhhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE----TEELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~----~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+ +++||| ...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4577788899999999999995 579999999997532 224678889988 999999 4567889999
Q ss_pred cccccc--cccccCC-CCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAP-ENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~-~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++... .....+++.++..++.||++||+||| ..+|+||||+
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~ 163 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIK 163 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCc
Confidence 999999 7777641 12345899999999999999999999 7899999986
No 324
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.45 E-value=3.1e-14 Score=142.95 Aligned_cols=119 Identities=15% Similarity=0.079 Sum_probs=93.6
Q ss_pred HHHHhhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc------hhhHHHHHHhhc--cccccC--------CCC
Q 007553 478 MIQATEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE------TEELAFLETSST--DFRHYN--------SHT 540 (599)
Q Consensus 478 l~~at~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~------~~~~~f~~e~~~--~l~H~n--------~~~ 540 (599)
+....++|...+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|+.+ .++||| ...
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 344566788889999999999999986 468899999986432 224678899998 999999 456
Q ss_pred CCcceeecccccc--cccccCCC-------------------------------------CCCCCChHHHHHHHHHHHHH
Q 007553 541 DNDDSSDEHLANN--EHFLSAPE-------------------------------------NYERVDFSPDFSIADQSKKG 581 (599)
Q Consensus 541 ~~~~lv~e~~~~G--~~~l~~~~-------------------------------------~~~~l~~~~~~~ia~~ia~g 581 (599)
+..++||||+++| .+++.... ....+++.....|+.||++|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 7789999999999 77774200 01123566788899999999
Q ss_pred HhhhhCCCCccccccccC
Q 007553 582 FKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 582 l~yLH~~~~~~i~Hrdl~ 599 (599)
|+||| ..+|+||||+
T Consensus 181 l~~LH---~~~ivH~Dlk 195 (345)
T 3hko_A 181 LHYLH---NQGICHRDIK 195 (345)
T ss_dssp HHHHH---HTTEECCCCC
T ss_pred HHHHH---HCCccccCCC
Confidence 99999 7799999996
No 325
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.45 E-value=2.1e-14 Score=144.50 Aligned_cols=112 Identities=16% Similarity=0.175 Sum_probs=91.2
Q ss_pred hhhccccceecccCCceEEEEEe----CCCCEEEEEEecCCc-----hhhHHHHHHhhc--cc-cccC--------CCCC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL----SSGRVVALKKLHRSE-----TEELAFLETSST--DF-RHYN--------SHTD 541 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~----~~g~~vavK~l~~~~-----~~~~~f~~e~~~--~l-~H~n--------~~~~ 541 (599)
.++|...+.||+|+||.||++.. .+|+.||||++.... .....+.+|+.+ .+ +||| ...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35677788999999999999986 368999999986532 113446667776 67 6999 3567
Q ss_pred Ccceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 542 NDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 542 ~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..++||||+++| .+++..+ ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlk 186 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIK 186 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred eEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCC
Confidence 789999999999 8888743 24899999999999999999999 7799999996
No 326
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.45 E-value=6.1e-14 Score=136.61 Aligned_cols=111 Identities=23% Similarity=0.251 Sum_probs=93.0
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|.....||+|+||.||+|... +++.||||.+...... ...+.+|+++ .++||| ...+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46777788999999999999964 5789999998653221 3568889988 999999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++... ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 94 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~ 141 (284)
T 2vgo_A 94 EFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCH---ERKVIHRDIK 141 (284)
T ss_dssp CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCS
T ss_pred EeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCC
Confidence 999999 7888743 24899999999999999999999 7899999985
No 327
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.45 E-value=7.4e-14 Score=138.99 Aligned_cols=114 Identities=18% Similarity=0.290 Sum_probs=91.7
Q ss_pred hhccccceecccCCceEEEEEe-CCCCE--EEEEEecCCch--hhHHHHHHhhc--cc-cccC--------CCCCCccee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRV--VALKKLHRSET--EELAFLETSST--DF-RHYN--------SHTDNDDSS 546 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~--vavK~l~~~~~--~~~~f~~e~~~--~l-~H~n--------~~~~~~~lv 546 (599)
++|.....||+|+||.||+|.. .+|.. ||||++..... ....+.+|+++ ++ +||| ...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 4577778899999999999985 35654 49999875432 24568889988 88 9999 456778999
Q ss_pred ecccccc--cccccCCC-------------CCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPE-------------NYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~-------------~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++.... ....+++.++..++.||++||+||| ..+|+||||+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlk 169 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLA 169 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCc
Confidence 9999999 88887532 2246899999999999999999999 7899999996
No 328
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.44 E-value=6e-14 Score=147.84 Aligned_cols=111 Identities=17% Similarity=0.129 Sum_probs=89.5
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET---EELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
+.|...+.||+|+||.||+|... +++.||||.+..... ....+.+|+.+ .++||| ...+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45777788999999999999964 689999999976432 24678899998 999999 45677899999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++..+ ..+++.++..|+.||++||+||| ..+|+||||+
T Consensus 117 ~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlk 163 (494)
T 3lij_A 117 CYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLK 163 (494)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred cCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCC
Confidence 99999 6677642 34899999999999999999999 7899999996
No 329
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.44 E-value=1e-13 Score=137.09 Aligned_cols=116 Identities=18% Similarity=0.229 Sum_probs=88.4
Q ss_pred HhhhccccceecccCCceEEEEEeC----CCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC--------CCC---
Q 007553 481 ATEDFHIKYCIGTGGYGSVYRAQLS----SGRVVALKKLHRSE---TEELAFLETSST--DFRHYN--------SHT--- 540 (599)
Q Consensus 481 at~~~~~~~~lg~g~~g~v~~~~~~----~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n--------~~~--- 540 (599)
..++|.....||+|+||.||+|... .++.||||++.... .....|.+|+.+ +++||| ...
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3456777788999999999999853 34589999987542 224678899988 999999 111
Q ss_pred --CCcceeecccccc--cccccCC---CCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 541 --DNDDSSDEHLANN--EHFLSAP---ENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 541 --~~~~lv~e~~~~G--~~~l~~~---~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
...++||||+++| .+++... .....+++.++..++.||++||+||| ..+|+||||+
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dik 174 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLA 174 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCS
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 2358999999999 7777421 23356899999999999999999999 7899999996
No 330
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.44 E-value=8.8e-14 Score=135.89 Aligned_cols=111 Identities=20% Similarity=0.217 Sum_probs=88.7
Q ss_pred ccccceecccCCceEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC------------CCCCCccee
Q 007553 485 FHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN------------SHTDNDDSS 546 (599)
Q Consensus 485 ~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n------------~~~~~~~lv 546 (599)
|.....||+|+||.||+|.. .++..||+|.+.... .....+.+|+.+ .++||| ......++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 44456799999999999986 468899999986542 224678889988 999999 123557999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++... ..+++.++..++.||++||+|||+. .++|+||||+
T Consensus 108 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dik 158 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLK 158 (290)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCC
T ss_pred EEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCC
Confidence 9999999 8888742 3489999999999999999999932 2349999996
No 331
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.44 E-value=6.6e-14 Score=135.70 Aligned_cols=111 Identities=17% Similarity=0.155 Sum_probs=93.0
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|.....||+|+||.||+|... +|+.||||.+...... ...+.+|+.+ .++||| ...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 35666788999999999999964 7999999998654321 3568888887 999999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++... ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 91 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~ 138 (276)
T 2h6d_A 91 EYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLK 138 (276)
T ss_dssp ECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCC
T ss_pred eccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCC
Confidence 999998 8888743 24899999999999999999999 7899999986
No 332
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.44 E-value=1e-13 Score=139.65 Aligned_cols=110 Identities=23% Similarity=0.300 Sum_probs=91.8
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------C-----CCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------S-----HTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~-----~~~~~~ 544 (599)
++|.....||+|+||.||+|... +|+.||||++...... ...+.+|+.+ .++||| . .....+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 46777788999999999999964 6899999999754332 4568889988 999999 1 126679
Q ss_pred eeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++. .+++..+ .+++.++..++.||++||+||| ..+|+||||+
T Consensus 91 lv~e~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlk 139 (353)
T 2b9h_A 91 IIQELMQTDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLK 139 (353)
T ss_dssp EEECCCSEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred EEEeccCccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCC
Confidence 999999976 7777742 4899999999999999999999 7899999996
No 333
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.44 E-value=8.3e-14 Score=138.50 Aligned_cols=112 Identities=17% Similarity=0.279 Sum_probs=90.7
Q ss_pred hhccccceecccCCceEEEEEe-CCCC----EEEEEEecCCch--hhHHHHHHhhc--cccccC-------CCCCCccee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGR----VVALKKLHRSET--EELAFLETSST--DFRHYN-------SHTDNDDSS 546 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~----~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n-------~~~~~~~lv 546 (599)
++|...+.||+|+||.||+|.. .+|+ .||+|.+..... ...++.+|+.+ .++||| ...+..++|
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v 94 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEE
Confidence 4577778899999999999995 3454 358888755432 25678899988 999999 234568899
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||+++| .+++.... ..+++.+++.|+.||++||+||| ..+|+||||+
T Consensus 95 ~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 144 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLA 144 (327)
T ss_dssp ECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred EEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCC
Confidence 9999999 88887533 34899999999999999999999 7899999996
No 334
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.44 E-value=1.2e-13 Score=137.28 Aligned_cols=107 Identities=16% Similarity=0.027 Sum_probs=88.5
Q ss_pred ceecccCCceEEEEEeC-CCCEEEEEEecCCchh---hHHHHHHhhc--cc-cccC--------CCCCCcceeecccccc
Q 007553 489 YCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE---ELAFLETSST--DF-RHYN--------SHTDNDDSSDEHLANN 553 (599)
Q Consensus 489 ~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~---~~~f~~e~~~--~l-~H~n--------~~~~~~~lv~e~~~~G 553 (599)
+.||+|+||.||+|... +|+.||||.+...... ..++.+|+.+ .+ +||| ...+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 77999999999999864 6899999998764322 4678888887 55 5698 4567789999999999
Q ss_pred --cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 554 --EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 554 --~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+++... ....+++.++..++.||++||+||| ..+|+||||+
T Consensus 115 ~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dik 158 (327)
T 3lm5_A 115 EIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLK 158 (327)
T ss_dssp EGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred cHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCC
Confidence 7777643 2345899999999999999999999 7899999996
No 335
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=4.8e-13 Score=119.48 Aligned_cols=105 Identities=30% Similarity=0.386 Sum_probs=70.8
Q ss_pred CEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecc
Q 007553 47 KVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLN 126 (599)
Q Consensus 47 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n 126 (599)
+.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++.+..+..|.++++|++|++++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777777775 5555443 66777777777777666666777777777777777776555555666777777777777
Q ss_pred cccccCCccccCCCcccEEecccCccCC
Q 007553 127 QLSGRLPQEVGNLKNLVSLFLDNNNLTG 154 (599)
Q Consensus 127 ~i~~~~~~~l~~l~~L~~L~l~~n~i~~ 154 (599)
.+.+..++.+.++++|++|++++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 7765555556667777777777776653
No 336
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.44 E-value=1.7e-13 Score=137.31 Aligned_cols=113 Identities=19% Similarity=0.224 Sum_probs=92.4
Q ss_pred HHhhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc----cccccC--------CCC----CCc
Q 007553 480 QATEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST----DFRHYN--------SHT----DND 543 (599)
Q Consensus 480 ~at~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~----~l~H~n--------~~~----~~~ 543 (599)
...++|.....||+|+||.||+|.. +|+.||||++.... ...+.+|+++ .++||| ... ...
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 115 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh--HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence 3456788888999999999999998 59999999996532 3456677776 389999 122 268
Q ss_pred ceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCC-----CccccccccC
Q 007553 544 DSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRK-----YRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~-----~~~i~Hrdl~ 599 (599)
++||||+++| .+++... .++|.++..++.|||+||+|||... ..+|+||||+
T Consensus 116 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk 174 (342)
T 1b6c_B 116 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174 (342)
T ss_dssp EEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCS
T ss_pred EEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCC
Confidence 9999999999 8888743 3899999999999999999999432 6899999996
No 337
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.44 E-value=5.7e-14 Score=147.77 Aligned_cols=111 Identities=15% Similarity=0.199 Sum_probs=93.3
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSE---TEELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
+.|.....||+|+||.||+|... +|+.||||++.... .....+.+|+.+ +++||| ...+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 45777788999999999999964 78999999986432 224678899998 999999 45677899999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++..+ ..+++.++..|+.||++||+||| ..+|+||||+
T Consensus 102 ~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlk 148 (486)
T 3mwu_A 102 LYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLK 148 (486)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred cCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCc
Confidence 99999 6666642 34899999999999999999999 7899999996
No 338
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.44 E-value=4.3e-14 Score=141.03 Aligned_cols=112 Identities=14% Similarity=0.131 Sum_probs=92.3
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch---------hhHHHHHHhhc--cccccC--------CCCC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET---------EELAFLETSST--DFRHYN--------SHTD 541 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~---------~~~~f~~e~~~--~l~H~n--------~~~~ 541 (599)
.++|.....||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+ +++||| ...+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 45677788999999999999984 5789999999976431 12356678887 899999 4567
Q ss_pred Ccceeecccccc---cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 542 NDDSSDEHLANN---EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 542 ~~~lv~e~~~~G---~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..++||||+.+| .+++... ..+++..+..|+.||++||+||| ..+|+||||+
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlk 157 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIK 157 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred EEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccC
Confidence 789999999888 6677642 34899999999999999999999 7799999996
No 339
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.44 E-value=1.3e-13 Score=136.63 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=85.6
Q ss_pred hccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh-hHHHHHHhhc--cccccC-------C--------------
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE-ELAFLETSST--DFRHYN-------S-------------- 538 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~H~n-------~-------------- 538 (599)
.|...+.||+|+||.||+|... +|+.||||++...... ..++.+|+.+ +++||| .
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 4666778999999999999975 5899999999765433 5678899988 999999 0
Q ss_pred -CCCCcceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 539 -HTDNDDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 539 -~~~~~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..+..++||||+++. .+++.. ..+++.+...++.||++||+||| ..+|+||||+
T Consensus 92 ~~~~~~~lv~e~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlk 147 (320)
T 2i6l_A 92 TELNSVYIVQEYMETDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLK 147 (320)
T ss_dssp CSCSEEEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCS
T ss_pred cccCceeEEeeccCCCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCC
Confidence 124568999999955 888864 24889999999999999999999 7899999996
No 340
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.44 E-value=5.3e-14 Score=143.29 Aligned_cols=114 Identities=14% Similarity=0.117 Sum_probs=87.6
Q ss_pred HHhhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cccccC---------CC--------
Q 007553 480 QATEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DFRHYN---------SH-------- 539 (599)
Q Consensus 480 ~at~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n---------~~-------- 539 (599)
...++|...+.||+|+||.||+|.. .+|+.||||++...... ..+|+.+ .++||| ..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 80 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP 80 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---HHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence 3456788888999999999999985 57999999998654322 2357777 899999 11
Q ss_pred -----------------------------CCCcceeecccccc-cccccCC-CCCCCCChHHHHHHHHHHHHHHhhhhCC
Q 007553 540 -----------------------------TDNDDSSDEHLANN-EHFLSAP-ENYERVDFSPDFSIADQSKKGFKLLADR 588 (599)
Q Consensus 540 -----------------------------~~~~~lv~e~~~~G-~~~l~~~-~~~~~l~~~~~~~ia~~ia~gl~yLH~~ 588 (599)
....++||||++++ .+++... .....+++.....++.||++||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-- 158 (383)
T 3eb0_A 81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH-- 158 (383)
T ss_dssp -----------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH--
T ss_pred ccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--
Confidence 11267999999977 6666531 12345899999999999999999999
Q ss_pred CCccccccccC
Q 007553 589 KYRKSYYQRLY 599 (599)
Q Consensus 589 ~~~~i~Hrdl~ 599 (599)
..+|+||||+
T Consensus 159 -~~gi~H~Dik 168 (383)
T 3eb0_A 159 -SLGICHRDIK 168 (383)
T ss_dssp -TTTEECSCCC
T ss_pred -HCcCccCccC
Confidence 7899999996
No 341
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.44 E-value=5.2e-14 Score=137.03 Aligned_cols=111 Identities=21% Similarity=0.288 Sum_probs=91.2
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchhhHHHHHHhhc--cccccC-------C-------------
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETEELAFLETSST--DFRHYN-------S------------- 538 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n-------~------------- 538 (599)
..+|...+.||+|+||.||+|... +|+.||||++.... ..+.+|+.+ +++||| .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 346777888999999999999975 79999999997643 345678877 899999 1
Q ss_pred ----CCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 539 ----HTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 539 ----~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.....++||||+++| .+++.... ...+++..+..++.||++||+||| ..+|+||||+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlk 149 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIH---SKKLINRDLK 149 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCC
Confidence 023478999999999 88887432 235899999999999999999999 7799999986
No 342
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.44 E-value=7.8e-14 Score=139.29 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=92.3
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCc----hhhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSE----TEELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~----~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|...+.||+|+||.||++... +++.||+|.+.... .....+.+|+.+ .++||| ...+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 45666788999999999999964 58899999986542 224568889988 999999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++..+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 121 e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlk 168 (335)
T 2owb_A 121 ELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLK 168 (335)
T ss_dssp CCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred ecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCC
Confidence 999999 7776642 34899999999999999999999 7799999986
No 343
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.44 E-value=7.9e-14 Score=137.54 Aligned_cols=112 Identities=14% Similarity=0.173 Sum_probs=94.0
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh----hHHHHHHhhc--cccccC--------CCCCCccee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE----ELAFLETSST--DFRHYN--------SHTDNDDSS 546 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv 546 (599)
.++|...+.||+|+||.||+|... +++.||||.+...... ...+.+|+.+ +++||| ...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 356777888999999999999964 6889999999754322 3568889888 999999 456778999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||+++| .+++... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 113 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlk 161 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVK 161 (309)
T ss_dssp EECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred EEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCC
Confidence 9999999 8888742 35899999999999999999999 7899999986
No 344
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.44 E-value=8.9e-14 Score=138.97 Aligned_cols=113 Identities=23% Similarity=0.261 Sum_probs=90.1
Q ss_pred hccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh-hHHHHHHhhc--ccc-ccC-------C---------CCCC
Q 007553 484 DFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE-ELAFLETSST--DFR-HYN-------S---------HTDN 542 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~-~~~f~~e~~~--~l~-H~n-------~---------~~~~ 542 (599)
+|...+.||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ ++. ||| . ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 566778899999999999995 47899999998655433 5678888887 775 999 1 1223
Q ss_pred cceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCcc--ccccccC
Q 007553 543 DDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRK--SYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~--i~Hrdl~ 599 (599)
.++||||+++. .+++........++|.++..|+.||++||+||| ..+ |+||||+
T Consensus 109 ~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dik 165 (337)
T 3ll6_A 109 FLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLK 165 (337)
T ss_dssp EEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCC
T ss_pred EEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCC
Confidence 68999999866 788865333346999999999999999999999 555 9999996
No 345
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.44 E-value=1.5e-13 Score=136.98 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=89.4
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--ccc-ccC----------CCCCCcceeec
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DFR-HYN----------SHTDNDDSSDE 548 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~-H~n----------~~~~~~~lv~e 548 (599)
++|...+.||+|+||.||+|.. .+|+.||||.+.... ...+.+|+.+ .++ ||| ......++|||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC--HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc--hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 4577778899999999999985 578999999997543 3567889888 786 999 12566799999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++.. +++.++..++.||++||+||| ..+|+||||+
T Consensus 114 ~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dik 157 (330)
T 3nsz_A 114 HVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCH---SMGIMHRDVK 157 (330)
T ss_dssp CCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred ccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCC
Confidence 99999 666652 889999999999999999999 7899999996
No 346
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.43 E-value=5.9e-14 Score=141.88 Aligned_cols=112 Identities=12% Similarity=0.155 Sum_probs=85.1
Q ss_pred hhhccccceecccCCceEEEEEeCC------CCEEEEEEecCCchh---h---------HHHHHHhhc--cccccC----
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSS------GRVVALKKLHRSETE---E---------LAFLETSST--DFRHYN---- 537 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~------g~~vavK~l~~~~~~---~---------~~f~~e~~~--~l~H~n---- 537 (599)
.++|...+.||+|+||.||+|.... ++.||||.+...... + ..++.|+.. .++|||
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4467778889999999999998754 478999998765422 1 123333333 788999
Q ss_pred ----CC----CCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 538 ----SH----TDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 538 ----~~----~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.. ....++||||+ +| .+++... ...++|.+++.|+.||++||+||| ..+|+||||+
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlk 179 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIK 179 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCC
Confidence 11 24479999999 77 8888753 245999999999999999999999 7799999996
No 347
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.43 E-value=1.1e-13 Score=151.60 Aligned_cols=109 Identities=21% Similarity=0.259 Sum_probs=87.7
Q ss_pred hhccccceecccCCceEEEEEeC--CCCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------CCCCC-----c
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS--SGRVVALKKLHRSET--EELAFLETSST--DFRHYN--------SHTDN-----D 543 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~--~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~~~~~-----~ 543 (599)
+.|.....||+|+||.||+|... +|+.||||++..... ....|.+|+.+ +++||| ...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 45777788999999999999864 589999999865432 24568899988 999999 12222 5
Q ss_pred ceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 544 DSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++|||||++| .+++.. .++|.+++.|+.||++||+||| ..+|+|||||
T Consensus 160 ~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlk 209 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLK 209 (681)
T ss_dssp EEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred EEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccC
Confidence 9999999999 666653 4899999999999999999999 7899999996
No 348
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.43 E-value=1.1e-13 Score=140.00 Aligned_cols=109 Identities=18% Similarity=0.148 Sum_probs=82.7
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch---hhHHHHHHhhc--cccccC--------CCC------CC
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET---EELAFLETSST--DFRHYN--------SHT------DN 542 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n--------~~~------~~ 542 (599)
+.|.....||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+ .++||| ... ..
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 3466678899999999999996 5799999999955322 24568899988 999999 111 34
Q ss_pred cceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++||||| +| .+++... .+++.+...++.||++||+||| ..+|+||||+
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlk 155 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLK 155 (367)
T ss_dssp CEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred EEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcC
Confidence 69999999 44 7777642 4899999999999999999999 7899999996
No 349
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.43 E-value=7.1e-14 Score=136.86 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=92.0
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCc----hhhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSE----TEELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~----~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
++|...+.||+|+||.||++... +++.||+|.+.... .....+.+|+.+ .++||| ...+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 35666788999999999999964 58899999986532 224568889988 999999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++..+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 95 e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~ 142 (294)
T 2rku_A 95 ELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLK 142 (294)
T ss_dssp ECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred ecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCC
Confidence 999999 7776632 35899999999999999999999 7799999986
No 350
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.43 E-value=9e-14 Score=143.51 Aligned_cols=112 Identities=16% Similarity=0.150 Sum_probs=90.7
Q ss_pred hccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cc------cccC--------CCCCCccee
Q 007553 484 DFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DF------RHYN--------SHTDNDDSS 546 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l------~H~n--------~~~~~~~lv 546 (599)
.|...+.||+|+||.||+|.. .+++.||||++........++.+|+.+ .+ +|+| ...+..++|
T Consensus 98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv 177 (429)
T 3kvw_A 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177 (429)
T ss_dssp TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEE
Confidence 466778899999999999985 458999999998765445667777766 44 5566 346778999
Q ss_pred ecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||++++ .+++.... ...++|..+..|+.||++||+||| ..+|+|||||
T Consensus 178 ~e~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlK 227 (429)
T 3kvw_A 178 FELLSMNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLK 227 (429)
T ss_dssp ECCCCCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCS
T ss_pred EeccCCCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCC
Confidence 9999877 77777532 234899999999999999999999 7899999996
No 351
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.43 E-value=1.2e-13 Score=135.65 Aligned_cols=113 Identities=25% Similarity=0.296 Sum_probs=91.1
Q ss_pred hhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh---hHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE---ELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~---~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
++|.....||+|+||.||+|... +|+.||||++...... ...+.+|+.+ +++||| ...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 45777788999999999999964 6899999998654322 3578889988 999999 45677899999
Q ss_pred ccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++. .+++.... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk 130 (299)
T 2r3i_A 83 FLHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLK 130 (299)
T ss_dssp CCSEEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred cccCCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCC
Confidence 99966 88887532 234889999999999999999999 7799999986
No 352
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.43 E-value=1.3e-13 Score=139.48 Aligned_cols=110 Identities=20% Similarity=0.183 Sum_probs=91.3
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh--hHHHHHHhhc--cccccC--------CC-----CCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE--ELAFLETSST--DFRHYN--------SH-----TDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~--~~~f~~e~~~--~l~H~n--------~~-----~~~~~ 544 (599)
+.|.....||+|+||.||+|.. .+++.||||++...... ...+.+|+.+ +++||| .. ....+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 4577778899999999999985 46889999999754322 4678899998 999999 11 14578
Q ss_pred eeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++. .+++... .+++.++..|+.||++||+||| ..+|+||||+
T Consensus 107 iv~e~~~~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 155 (364)
T 3qyz_A 107 IVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH---SANVLHRDLK 155 (364)
T ss_dssp EEEECCSEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred EEEcccCcCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCC
Confidence 999999977 8888743 3899999999999999999999 7899999996
No 353
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.43 E-value=1.3e-13 Score=140.59 Aligned_cols=109 Identities=14% Similarity=0.084 Sum_probs=89.9
Q ss_pred hccccceecccCCceEEEEEeCCCCEEEEEEecCCch---hhHHHHHHhhc--ccc--ccC--------CCCCCcceeec
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSET---EELAFLETSST--DFR--HYN--------SHTDNDDSSDE 548 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~--H~n--------~~~~~~~lv~e 548 (599)
.|...+.||+|+||.||+|...+|+.||||++..... ....+.+|+.+ .++ ||| ...+..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 4777788999999999999987799999999865432 24678899988 776 488 45667899999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
| .+| .+++... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 137 ~-~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlk 182 (390)
T 2zmd_A 137 C-GNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLK 182 (390)
T ss_dssp C-CSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCC
T ss_pred c-CCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCC
Confidence 5 455 8888753 25899999999999999999999 7899999996
No 354
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.43 E-value=9.7e-14 Score=136.14 Aligned_cols=110 Identities=14% Similarity=0.135 Sum_probs=89.4
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cc-cccC--------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DF-RHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l-~H~n--------~~~~~~~lv~e~~ 550 (599)
++|...+.||+|+||.||+|.. .+|+.||||.+..... ...+.+|+.+ .+ +||+ ......++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 3567778899999999999994 5799999999865432 3446677776 55 7777 4567789999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+| .+++.... ..+++.++..|+.||++||+||| ..+|+||||+
T Consensus 89 -~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlk 133 (298)
T 1csn_A 89 -GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIK 133 (298)
T ss_dssp -CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCC
T ss_pred -CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCC
Confidence 66 88887532 34899999999999999999999 7899999996
No 355
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.43 E-value=1.1e-13 Score=141.80 Aligned_cols=113 Identities=16% Similarity=0.181 Sum_probs=90.5
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--ccc--------ccC------------CC
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DFR--------HYN------------SH 539 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~--------H~n------------~~ 539 (599)
++|...+.||+|+||.||+|.. .+|+.||||++.........+.+|+.+ .++ ||| ..
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~ 116 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVN 116 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCC
Confidence 4577778899999999999984 568999999998665545678888887 554 666 14
Q ss_pred CCCcceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCc-cccccccC
Q 007553 540 TDNDDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYR-KSYYQRLY 599 (599)
Q Consensus 540 ~~~~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~-~i~Hrdl~ 599 (599)
+...++||||+.++ .+++... ....+++.++..|+.||++||+||| .. +|+|||||
T Consensus 117 ~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDik 174 (397)
T 1wak_A 117 GTHICMVFEVLGHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIK 174 (397)
T ss_dssp EEEEEEEECCCCCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCS
T ss_pred CceEEEEEeccCccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCC
Confidence 56789999999777 6555532 2245899999999999999999999 55 99999996
No 356
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.43 E-value=1.3e-13 Score=134.52 Aligned_cols=112 Identities=15% Similarity=0.201 Sum_probs=94.1
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET---EELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
.+.|.....||+|+||.||+|... +++.||||++..... ....+.+|+.+ +++||| ...+..++|+
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 356777889999999999999964 689999999865432 24678899988 999999 4567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 101 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~ 148 (287)
T 2wei_A 101 ELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLK 148 (287)
T ss_dssp CCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred EccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCC
Confidence 999999 6777642 24899999999999999999999 7799999986
No 357
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.42 E-value=6.1e-14 Score=142.50 Aligned_cols=114 Identities=8% Similarity=-0.059 Sum_probs=87.3
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc----hhhHHHHHHhh---c--cccccC----C---C-----
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE----TEELAFLETSS---T--DFRHYN----S---H----- 539 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~----~~~~~f~~e~~---~--~l~H~n----~---~----- 539 (599)
.++|...+.||+|+||.||+|.. .+|+.||||++.... .....|.+|+. . +++||| . .
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 34566678899999999999995 569999999996431 23467889984 3 779999 1 0
Q ss_pred ---------------CC-----Ccceeecccccc--cccccCCC----CCCCCChHHHHHHHHHHHHHHhhhhCCCCccc
Q 007553 540 ---------------TD-----NDDSSDEHLANN--EHFLSAPE----NYERVDFSPDFSIADQSKKGFKLLADRKYRKS 593 (599)
Q Consensus 540 ---------------~~-----~~~lv~e~~~~G--~~~l~~~~----~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i 593 (599)
.+ ..++||||+ +| .+++.... ....++|..+..|+.||++||+||| ..+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 11 378999999 46 88887421 1223557889999999999999999 7799
Q ss_pred cccccC
Q 007553 594 YYQRLY 599 (599)
Q Consensus 594 ~Hrdl~ 599 (599)
+|||||
T Consensus 228 vHrDik 233 (377)
T 3byv_A 228 VHTYLR 233 (377)
T ss_dssp ECSCCC
T ss_pred ecCCCC
Confidence 999996
No 358
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.42 E-value=1e-13 Score=135.81 Aligned_cols=110 Identities=15% Similarity=0.180 Sum_probs=90.9
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cccccC---------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DFRHYN---------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n---------~~~~~~~lv~e~~ 550 (599)
++|...+.||+|+||.||+|.. .+|+.||||++..... ..++.+|+.+ .++|++ ..++..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 4677788899999999999995 5799999999865432 3457788887 888887 3556679999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 88 -~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlk 132 (296)
T 3uzp_A 88 -GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVK 132 (296)
T ss_dssp -CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred -CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCC
Confidence 66 88887422 34899999999999999999999 7899999996
No 359
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.42 E-value=3.5e-11 Score=122.81 Aligned_cols=295 Identities=8% Similarity=0.081 Sum_probs=159.3
Q ss_pred CCCCCC-CCCEEeccCCcccccCCccCCCCCCCcEEEeecCc---CCccCCccccCCCcCCEEeeecccccccCCccccC
Q 007553 63 EIGSLR-DLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNK---LDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGN 138 (599)
Q Consensus 63 ~~~~l~-~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~---~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~ 138 (599)
+|.++. .|+.+.+..+ ++.+...+|.++.+|+.+.+..|. +..+....|..+.+|+.+.+..+ ++.+...++.+
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 344432 3444444433 333334444445555555444432 32223344444444444444322 22233334445
Q ss_pred CCcccEEecccCccCCCCcccccCCCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEe
Q 007553 139 LKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELR 218 (599)
Q Consensus 139 l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 218 (599)
+.+|+.+.+..+ +.......|..+..|+.+.+..+ +...-..+|. ...|+.+.+..+... .....+..+..+....
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~ 211 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTIT 211 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEE
T ss_pred hcccccccccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceec
Confidence 555555554432 12122234444555555554332 2212222232 234555544432211 1223344444444444
Q ss_pred CCCCcCcccC-------------cccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCC
Q 007553 219 LSHNRLDGPI-------------PPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTN 285 (599)
Q Consensus 219 l~~n~l~~~~-------------~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 285 (599)
.......... ...+.....+..+.+.. .+.......|..+..|+.+.+..+.. ......|..+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~ 289 (394)
T 4gt6_A 212 SDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPA 289 (394)
T ss_dssp ECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTT
T ss_pred ccccccccccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccc-eecCcccccccc
Confidence 3332221100 00122233444455432 23334456788999999999976543 345567888999
Q ss_pred CCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCC
Q 007553 286 LTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSK 365 (599)
Q Consensus 286 L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~ 365 (599)
|+.+.+. +.+......+|.+|.+|+.+++..+ ++.....+|.++.+|+.+.+..+ ++..-..+|..+.+|+.+++.+
T Consensus 290 L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~ 366 (394)
T 4gt6_A 290 LQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSG 366 (394)
T ss_dssp CCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESS
T ss_pred cccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECC
Confidence 9999996 4455556678999999999999765 55455678999999999999765 6656667899999999999998
Q ss_pred CcC
Q 007553 366 NNL 368 (599)
Q Consensus 366 n~l 368 (599)
+..
T Consensus 367 ~~~ 369 (394)
T 4gt6_A 367 SRS 369 (394)
T ss_dssp CHH
T ss_pred cee
Confidence 754
No 360
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.42 E-value=1.1e-13 Score=135.75 Aligned_cols=112 Identities=14% Similarity=0.024 Sum_probs=92.7
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCc----------hhhHHHHHHhhc--ccc-ccC--------CC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSE----------TEELAFLETSST--DFR-HYN--------SH 539 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~----------~~~~~f~~e~~~--~l~-H~n--------~~ 539 (599)
.++|.....||+|+||.||+|... +|+.||||.+.... .....+.+|+.+ ++. ||| ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 346777788999999999999964 68999999996542 113467888887 775 999 45
Q ss_pred CCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 540 TDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 540 ~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+..++||||+++| .+++..+ ..+++.+...++.||+.||+||| ..+|+||||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~ 151 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALH---KLNIVHRDLK 151 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCC
Confidence 67789999999999 8888742 34899999999999999999999 7899999985
No 361
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.42 E-value=6.1e-14 Score=149.65 Aligned_cols=114 Identities=19% Similarity=0.225 Sum_probs=94.4
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch--hhHHHHHHhhc--cccccC--------C------CCCCc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET--EELAFLETSST--DFRHYN--------S------HTDND 543 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~--~~~~f~~e~~~--~l~H~n--------~------~~~~~ 543 (599)
++|.....||+|+||.||+|.. .+|+.||||++..... ....|.+|+.+ +++||| . .++..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 5677788899999999999986 4689999999876432 24678899998 999999 1 25677
Q ss_pred ceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 544 DSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 544 ~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++||||+++| .+++........+++..+..|+.||++||+||| ..+|+||||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLK 148 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLK 148 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCC
Confidence 9999999999 888886554456899999999999999999999 7899999986
No 362
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.42 E-value=6.1e-14 Score=144.43 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=85.7
Q ss_pred hccccceecccCCceEEEEEeC-CCCEEEEEEecCCchhhHHHHHHhhc--cccccC-C-----------CC--CCccee
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETEELAFLETSST--DFRHYN-S-----------HT--DNDDSS 546 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n-~-----------~~--~~~~lv 546 (599)
.|...+.||+|+||.||+|... +|+.||||++..... .+.+|+.+ .++||| . .. ..+++|
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 4666788999999999999974 699999999865432 23357777 999999 0 11 125689
Q ss_pred ecccccc-cccccC-CCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN-EHFLSA-PENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G-~~~l~~-~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|||++++ .+++.. ......+++.....++.||++||+||| ..+|+|||||
T Consensus 132 ~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlk 183 (420)
T 1j1b_A 132 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIK 183 (420)
T ss_dssp EECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCS
T ss_pred hhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCC
Confidence 9999988 555542 112345899999999999999999999 7899999996
No 363
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.42 E-value=6.6e-14 Score=143.71 Aligned_cols=108 Identities=17% Similarity=0.150 Sum_probs=81.1
Q ss_pred cceecccCCceEEEEEeC---CCCEEEEEEecCCchhhHHHHHHhhc--cccccC----------CCCCCcceeeccccc
Q 007553 488 KYCIGTGGYGSVYRAQLS---SGRVVALKKLHRSETEELAFLETSST--DFRHYN----------SHTDNDDSSDEHLAN 552 (599)
Q Consensus 488 ~~~lg~g~~g~v~~~~~~---~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n----------~~~~~~~lv~e~~~~ 552 (599)
...||+|+||.||+|... +++.||||++..... ...+.+|+.+ .++||| ......++||||+++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~ 104 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 104 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC
Confidence 346999999999999965 578999999975432 3467889988 999999 235668999999998
Q ss_pred c-cccccCC------CCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 553 N-EHFLSAP------ENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 553 G-~~~l~~~------~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+ .+++... .....+++.++..|+.||+.||+||| ..+|+||||+
T Consensus 105 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlk 155 (405)
T 3rgf_A 105 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLK 155 (405)
T ss_dssp EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcC
Confidence 8 6666521 11234899999999999999999999 7899999996
No 364
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.41 E-value=2e-13 Score=136.26 Aligned_cols=112 Identities=13% Similarity=0.044 Sum_probs=86.0
Q ss_pred hhccc-cceecccCCceEEEEEeC-CCCEEEEEEecCCchhhHHHHHHhhccccccC------------CCCCCcceeec
Q 007553 483 EDFHI-KYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETEELAFLETSSTDFRHYN------------SHTDNDDSSDE 548 (599)
Q Consensus 483 ~~~~~-~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~~~~f~~e~~~~l~H~n------------~~~~~~~lv~e 548 (599)
++|.. .+.||+|+||.||+|... +|+.||||++........++..+.. .++||| ......++|||
T Consensus 28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~-~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 106 (336)
T 3fhr_A 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQ-ASGGPHIVCILDVYENMHHGKRCLLIIME 106 (336)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHH-HTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHH-hcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence 45555 456999999999999964 6999999999764332222222111 778998 12445799999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++..+. ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 107 ~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlk 155 (336)
T 3fhr_A 107 CMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVK 155 (336)
T ss_dssp CCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred ccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 99999 88887532 346899999999999999999999 7799999996
No 365
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=8.1e-13 Score=117.58 Aligned_cols=107 Identities=27% Similarity=0.281 Sum_probs=76.6
Q ss_pred CCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecc
Q 007553 69 DLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLD 148 (599)
Q Consensus 69 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~ 148 (599)
..+++++++|.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|++++|++++..++.|.++++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3567888888877 4555443 677888888888877667777777777777777777776666666777777777777
Q ss_pred cCccCCCCcccccCCCCCCeeecccccccc
Q 007553 149 NNNLTGPIPSTLYHLNQLSTLYLAYNNLVG 178 (599)
Q Consensus 149 ~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~ 178 (599)
+|++++..+..|..+++|++|+|++|.+..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 777776555556677777777777776653
No 366
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.41 E-value=1.5e-13 Score=135.94 Aligned_cols=112 Identities=18% Similarity=0.241 Sum_probs=89.2
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCCCcceeeccc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTDNDDSSDEHL 550 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e~~ 550 (599)
.+.|.....||+|+||.||+|... +|+.||||.+.... ...++.+|+.+ .++||| ...+..++||||+
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 345777788999999999999964 58999999997643 24568889888 999999 3567789999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++| .+++..+ ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 107 ~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~ 152 (314)
T 3com_A 107 GAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIK 152 (314)
T ss_dssp TTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcC
Confidence 999 8887632 234899999999999999999999 7899999985
No 367
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.41 E-value=1.9e-13 Score=134.84 Aligned_cols=114 Identities=22% Similarity=0.280 Sum_probs=88.1
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch------hhHHHHHHhhc-----cccccC--------CCCC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET------EELAFLETSST-----DFRHYN--------SHTD 541 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~------~~~~f~~e~~~-----~l~H~n--------~~~~ 541 (599)
+++|.....||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+ .++||| ....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 45788788899999999999994 5789999999864221 12456677765 445999 1111
Q ss_pred -----Ccceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 542 -----NDDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 542 -----~~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..++||||+++. .+++.... ...+++.++..|+.||++||+||| ..+|+||||+
T Consensus 88 ~~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlk 147 (308)
T 3g33_A 88 TDREIKVTLVFEHVDQDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLK 147 (308)
T ss_dssp SSSEEEEEEEEECCCCBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred CCCceeEEEEehhhhcCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCC
Confidence 368999999977 88887533 234899999999999999999999 7789999996
No 368
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.41 E-value=1e-13 Score=137.37 Aligned_cols=111 Identities=20% Similarity=0.214 Sum_probs=91.4
Q ss_pred hhhccccceecccCCceEEEEEeCCCCEEEEEEecCCchh---hHHHHHHhhc--cccccC--------CCCCCcceeec
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETE---ELAFLETSST--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~---~~~f~~e~~~--~l~H~n--------~~~~~~~lv~e 548 (599)
.++|.....||+|+||.||+|...+ .||||.+...... ...|.+|+.+ +++||| ...+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4456777889999999999999743 4999998654322 3457788887 999999 45667899999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+++| .+++...+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 110 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlk 157 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLK 157 (319)
T ss_dssp CCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred cccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCC
Confidence 99999 88887532 35899999999999999999999 7799999996
No 369
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.41 E-value=5.1e-14 Score=141.70 Aligned_cols=108 Identities=9% Similarity=0.019 Sum_probs=87.2
Q ss_pred hhccccceecccCCceEEEEEeC---------CCCEEEEEEecCCchhhHHHHHHhhc--cccccC-C------------
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS---------SGRVVALKKLHRSETEELAFLETSST--DFRHYN-S------------ 538 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~---------~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n-~------------ 538 (599)
++|...+.||+|+||.||+|... +++.||||.+... ..+.+|+.+ +++||| .
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 45677788999999999999965 3789999998754 346778877 888988 1
Q ss_pred -----------CCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 539 -----------HTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 539 -----------~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..+..++||||+ +| .+++.... ...+++.++..|+.||++||+||| ..+|+||||+
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dik 186 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVT 186 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCC
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCC
Confidence 256789999999 77 88887531 245899999999999999999999 7799999996
No 370
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.41 E-value=1.7e-13 Score=137.95 Aligned_cols=113 Identities=19% Similarity=0.161 Sum_probs=90.6
Q ss_pred hhccccceecccCCceEEEEEeC-CC-CEEEEEEecCCchhhHHHHHHhhc--cccccC--------------CCCCCcc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS-SG-RVVALKKLHRSETEELAFLETSST--DFRHYN--------------SHTDNDD 544 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~-~g-~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------------~~~~~~~ 544 (599)
++|.....||+|+||.||+|... ++ +.||||++.........+.+|+.+ .++|++ ...+..+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC 98 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence 45677788999999999999853 34 789999998655555677788887 777765 2356778
Q ss_pred eeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+.++ .+++.... ...+++.++..|+.||++||+||| ..+|+||||+
T Consensus 99 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlk 150 (355)
T 2eu9_A 99 IAFELLGKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLK 150 (355)
T ss_dssp EEEECCCCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCC
T ss_pred EEEeccCCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCC
Confidence 999999777 66666432 245899999999999999999999 7899999996
No 371
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.41 E-value=2.1e-13 Score=138.09 Aligned_cols=109 Identities=22% Similarity=0.111 Sum_probs=89.8
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC--------CCC------CC
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN--------SHT------DN 542 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n--------~~~------~~ 542 (599)
++|.....||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+ .++||| ... ..
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 4577778899999999999985 468999999997532 224568889988 899999 122 25
Q ss_pred cceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++||||++++ .+++.. .+++.+...++.||++||+||| ..+|+||||+
T Consensus 105 ~~lv~e~~~~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlk 154 (371)
T 2xrw_A 105 VYIVMELMDANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLK 154 (371)
T ss_dssp EEEEEECCSEEHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred eEEEEEcCCCCHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCC
Confidence 69999999988 777762 3889999999999999999999 7899999996
No 372
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.40 E-value=1.3e-13 Score=150.01 Aligned_cols=113 Identities=15% Similarity=0.134 Sum_probs=91.4
Q ss_pred HhhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc----hhhHHHHHHhhc--cc-cccC--------CCCCCcc
Q 007553 481 ATEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE----TEELAFLETSST--DF-RHYN--------SHTDNDD 544 (599)
Q Consensus 481 at~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~----~~~~~f~~e~~~--~l-~H~n--------~~~~~~~ 544 (599)
..++|.....||+|+||.||+|.. .+|+.||||++.... .....+..|..+ .+ +||+ ...+.++
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 346788888999999999999996 468899999997532 123456677776 44 7888 4567789
Q ss_pred eeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||+++| .++++.. ..+++.++..++.||+.||+||| ..+|+|||||
T Consensus 419 lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLK 469 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLK 469 (674)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCC
T ss_pred EEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCC
Confidence 999999999 7788742 24899999999999999999999 7899999997
No 373
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.40 E-value=1.9e-13 Score=134.15 Aligned_cols=103 Identities=12% Similarity=-0.045 Sum_probs=85.1
Q ss_pred ceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc---cccccC--------C----CCCCcceeeccccc
Q 007553 489 YCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST---DFRHYN--------S----HTDNDDSSDEHLAN 552 (599)
Q Consensus 489 ~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~---~l~H~n--------~----~~~~~~lv~e~~~~ 552 (599)
+.||+|+||.||+|.. .+|+.||||++... ..+.+|+.+ ..+||| . .....++||||+++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 99 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 99 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence 6799999999999985 57899999999653 335566665 679999 1 25568999999999
Q ss_pred c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 553 N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 553 G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
| .+++..+. ...+++.++..++.||+.||+||| ..+|+||||+
T Consensus 100 ~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlk 144 (299)
T 3m2w_A 100 GELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 144 (299)
T ss_dssp CBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred CcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 9 88887532 345899999999999999999999 7899999996
No 374
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.40 E-value=1.2e-13 Score=135.36 Aligned_cols=111 Identities=15% Similarity=0.176 Sum_probs=87.6
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cccccC---------CCCCCcceeecc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DFRHYN---------SHTDNDDSSDEH 549 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n---------~~~~~~~lv~e~ 549 (599)
.++|...+.||+|+||.||+|.. .+|+.||||.+..... ..++.+|+.+ .++|++ ...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 45677888999999999999995 5789999998755332 2346778777 888887 356677999999
Q ss_pred cccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 550 LANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 550 ~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+ +| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 87 ~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlk 132 (296)
T 4hgt_A 87 L-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVK 132 (296)
T ss_dssp C-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred c-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCC
Confidence 9 66 78877432 34899999999999999999999 7899999996
No 375
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.40 E-value=1.7e-13 Score=136.95 Aligned_cols=112 Identities=19% Similarity=0.149 Sum_probs=91.0
Q ss_pred hccccceecccCCceEEEEEe--CCCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------------CCCCCcce
Q 007553 484 DFHIKYCIGTGGYGSVYRAQL--SSGRVVALKKLHRSETEELAFLETSST--DFRHYN--------------SHTDNDDS 545 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~--~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------------~~~~~~~l 545 (599)
+|.....||+|+||.||+|.. .+|+.||||++.........+.+|+.+ .++|++ ...+..++
T Consensus 15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~l 94 (339)
T 1z57_A 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICI 94 (339)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEE
T ss_pred ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEE
Confidence 566678899999999999985 368899999998765555678888887 777765 24567899
Q ss_pred eecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||||+.++ .+++.... ..++++.++..++.||++||+||| ..+|+||||+
T Consensus 95 v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlk 145 (339)
T 1z57_A 95 VFELLGLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLK 145 (339)
T ss_dssp EEECCCCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred EEcCCCCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCC
Confidence 99999544 88887532 345899999999999999999999 7899999996
No 376
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.40 E-value=2.1e-13 Score=137.67 Aligned_cols=123 Identities=15% Similarity=0.051 Sum_probs=85.0
Q ss_pred HHHHHHhhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CCCC---
Q 007553 476 EEMIQATEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SHTD--- 541 (599)
Q Consensus 476 ~~l~~at~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~~~--- 541 (599)
.+.....++|...+.||+|+||.||+|.. .+|+.||||++.........+.+|+.. .++||| ...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 44566678899899999999999999996 468999999986654434456666665 789999 1111
Q ss_pred ----Ccceeecccccc-cccccC-CCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 542 ----NDDSSDEHLANN-EHFLSA-PENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 542 ----~~~lv~e~~~~G-~~~l~~-~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..++||||++++ .+.+.. ......+++.....++.||+.||+||| ....+|+||||+
T Consensus 96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlk 158 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIK 158 (360)
T ss_dssp TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCC
T ss_pred ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCC
Confidence 168999999999 554442 122345889999999999999999999 347899999996
No 377
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.40 E-value=1.8e-13 Score=142.70 Aligned_cols=110 Identities=15% Similarity=0.204 Sum_probs=89.4
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--cccccC---------CCCCCcceeeccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DFRHYN---------SHTDNDDSSDEHL 550 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n---------~~~~~~~lv~e~~ 550 (599)
++|...+.||+|+||.||+|.. .+|+.||||.+..... ..++..|+++ .++|++ ...+..++||||+
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 4577788899999999999995 5799999998765432 2346777777 777765 4567779999999
Q ss_pred ccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 551 ANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 551 ~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+| .+++.... ..++|.+++.|+.||+.||+||| ..+|+|||||
T Consensus 86 -g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIK 130 (483)
T 3sv0_A 86 -GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIK 130 (483)
T ss_dssp -CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred -CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccC
Confidence 66 88887422 34999999999999999999999 7899999996
No 378
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.40 E-value=3.3e-13 Score=136.27 Aligned_cols=110 Identities=19% Similarity=0.201 Sum_probs=82.4
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHhhc--cccccC--------CC------CCC
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSE---TEELAFLETSST--DFRHYN--------SH------TDN 542 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H~n--------~~------~~~ 542 (599)
+.|.....||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+ .++||| .. ...
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 4566778899999999999984 578999999996532 224678889988 999999 11 256
Q ss_pred cceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++|+||+.+. .+++.. ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 109 ~~lv~e~~~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlk 159 (367)
T 2fst_X 109 VYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLK 159 (367)
T ss_dssp CEEEEECCCEECC---------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred EEEEecccCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCC
Confidence 79999999433 777764 24899999999999999999999 7899999996
No 379
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=1.4e-12 Score=116.47 Aligned_cols=106 Identities=25% Similarity=0.290 Sum_probs=75.9
Q ss_pred CCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEeccc
Q 007553 70 LLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDN 149 (599)
Q Consensus 70 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~ 149 (599)
-+.+++++|.++ .+|..+. ++|++|+|++|++.+..|..|.++++|++|++++|++++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 367888888776 5565553 6778888888888777677777777888888888777766555567777777777777
Q ss_pred CccCCCCcccccCCCCCCeeecccccccc
Q 007553 150 NNLTGPIPSTLYHLNQLSTLYLAYNNLVG 178 (599)
Q Consensus 150 n~i~~~~~~~l~~l~~L~~L~l~~n~~~~ 178 (599)
|++++..+..|..+++|++|+|++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 77775554456667777777777776653
No 380
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.39 E-value=4.5e-13 Score=135.67 Aligned_cols=109 Identities=20% Similarity=0.173 Sum_probs=88.7
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch---hhHHHHHHhhc--cccccC--------CCCCC------
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET---EELAFLETSST--DFRHYN--------SHTDN------ 542 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n--------~~~~~------ 542 (599)
+.|.....||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+ .++||| ...+.
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 3566678899999999999985 4689999999975422 24678889988 899999 22232
Q ss_pred cceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++||||+++. .+++.. .+++.++..++.||+.||+||| ..+|+||||+
T Consensus 122 ~~lv~e~~~~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 171 (371)
T 4exu_A 122 FYLVMPFMQTDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLK 171 (371)
T ss_dssp CEEEEECCCEEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCC
T ss_pred EEEEEccccccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcC
Confidence 38999999976 766642 2899999999999999999999 7799999996
No 381
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.39 E-value=5.9e-13 Score=133.94 Aligned_cols=109 Identities=20% Similarity=0.183 Sum_probs=88.5
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch---hhHHHHHHhhc--cccccC--------CCCC------C
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET---EELAFLETSST--DFRHYN--------SHTD------N 542 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~---~~~~f~~e~~~--~l~H~n--------~~~~------~ 542 (599)
++|.....||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+ .++||| ...+ .
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 3466677899999999999986 4689999999965422 24578889988 899999 2222 3
Q ss_pred cceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 543 DDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 543 ~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.++||||+++. .+++.. .+++.++..++.||++||+||| ..+|+||||+
T Consensus 104 ~~lv~e~~~~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlk 153 (353)
T 3coi_A 104 FYLVMPFMQTDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLK 153 (353)
T ss_dssp CEEEEECCSEEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCC
T ss_pred EEEEeccccCCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCC
Confidence 48999999965 777652 3899999999999999999999 7799999996
No 382
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.38 E-value=3.6e-13 Score=137.01 Aligned_cols=116 Identities=18% Similarity=0.119 Sum_probs=91.5
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--ccc-ccC-------------CCCCCcc
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DFR-HYN-------------SHTDNDD 544 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~-H~n-------------~~~~~~~ 544 (599)
.++|...+.||+|+||.||+|.. .+|+.||||++........++..|+.+ .++ |++ ...+..+
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 45677788999999999999985 468899999998654444566667766 443 443 3457789
Q ss_pred eeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 545 SSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 545 lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+||||++++ .+++.... ...+++..+..++.||+.||+|||.+ ..+|+|||||
T Consensus 133 lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlk 186 (382)
T 2vx3_A 133 LVFEMLSYNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLK 186 (382)
T ss_dssp EEEECCCCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCS
T ss_pred EEEecCCCCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCC
Confidence 999999877 88887532 23489999999999999999999943 5799999996
No 383
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.38 E-value=1.2e-13 Score=139.95 Aligned_cols=112 Identities=13% Similarity=-0.003 Sum_probs=81.4
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch----hhHHHHHHhhc--cc--cccC----CCC---------
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET----EELAFLETSST--DF--RHYN----SHT--------- 540 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~----~~~~f~~e~~~--~l--~H~n----~~~--------- 540 (599)
.+|...+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+.+ .+ +||| ...
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 3466778899999999999995 4789999999987542 24557777554 33 6998 100
Q ss_pred -------------------CCcceeecccccc-cccccCCCCCCCCChHHH------HHHHHHHHHHHhhhhCCCCcccc
Q 007553 541 -------------------DNDDSSDEHLANN-EHFLSAPENYERVDFSPD------FSIADQSKKGFKLLADRKYRKSY 594 (599)
Q Consensus 541 -------------------~~~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~------~~ia~~ia~gl~yLH~~~~~~i~ 594 (599)
...++|||||++. .+++.... ..+.+..+ ..|+.||++||+||| ..+|+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 2369999999933 88887532 22466666 899999999999999 78999
Q ss_pred ccccC
Q 007553 595 YQRLY 599 (599)
Q Consensus 595 Hrdl~ 599 (599)
|||||
T Consensus 217 HrDik 221 (371)
T 3q60_A 217 HGHFT 221 (371)
T ss_dssp ETTCS
T ss_pred cCcCC
Confidence 99996
No 384
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.38 E-value=1.9e-13 Score=133.47 Aligned_cols=112 Identities=21% Similarity=0.206 Sum_probs=84.0
Q ss_pred hhccccceecccCCceEEEEEeC--CCC--EEEEEEecCCc----hhhHHHHHHhhc--cccccC-------CCCCCcce
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS--SGR--VVALKKLHRSE----TEELAFLETSST--DFRHYN-------SHTDNDDS 545 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~--~g~--~vavK~l~~~~----~~~~~f~~e~~~--~l~H~n-------~~~~~~~l 545 (599)
++|.....||+|+||.||+|... +++ .||||++.... .....+.+|+.+ +++||| ...+..++
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM 97 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence 45777788999999999999852 333 68999986542 224678899988 899999 34455899
Q ss_pred eecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 546 SDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 546 v~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
|+||+++| .+++.... ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 98 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dik 148 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLA 148 (291)
T ss_dssp EEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred eEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCc
Confidence 99999999 77887432 34899999999999999999999 7799999986
No 385
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.38 E-value=3.6e-13 Score=133.96 Aligned_cols=114 Identities=18% Similarity=0.139 Sum_probs=89.8
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCch--hhHHHHHHhh-c--cccccC--------CCCCCcceeec
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSET--EELAFLETSS-T--DFRHYN--------SHTDNDDSSDE 548 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~--~~~~f~~e~~-~--~l~H~n--------~~~~~~~lv~e 548 (599)
++|.....||+|+||.||+|.. .+|+.||||++..... ...++..|+. + .++||| ...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 4566677899999999999996 4689999999976532 2345666665 3 889999 45677899999
Q ss_pred ccccc-cccccC--CCCCCCCChHHHHHHHHHHHHHHhhhhCCCCc-cccccccC
Q 007553 549 HLANN-EHFLSA--PENYERVDFSPDFSIADQSKKGFKLLADRKYR-KSYYQRLY 599 (599)
Q Consensus 549 ~~~~G-~~~l~~--~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~-~i~Hrdl~ 599 (599)
|++++ .+++.. ......+++..+..++.|+++||+||| .. +|+||||+
T Consensus 102 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlk 153 (327)
T 3aln_A 102 LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIK 153 (327)
T ss_dssp CCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCC
T ss_pred ecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCC
Confidence 99988 666652 112345899999999999999999999 66 99999996
No 386
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.38 E-value=1.7e-13 Score=137.38 Aligned_cols=110 Identities=10% Similarity=0.060 Sum_probs=82.4
Q ss_pred hhccccceecccCCceEEEEEeC----CCCEEEEEEecCCchh------------hHHHHHHhhc--cccccC-------
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLS----SGRVVALKKLHRSETE------------ELAFLETSST--DFRHYN------- 537 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~----~g~~vavK~l~~~~~~------------~~~f~~e~~~--~l~H~n------- 537 (599)
++|...+.||+|+||.||+|... ++..||||........ ...+.+|+.. .++|||
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 35667788999999999999974 5788999998764321 1235566666 889999
Q ss_pred -CC----CCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 538 -SH----TDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 538 -~~----~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.. ....++||||+ +| .+++...+ .+++.++..|+.||++||+||| ..+|+||||+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlk 178 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIK 178 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcC
Confidence 12 56789999999 77 88887532 5899999999999999999999 7799999996
No 387
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.36 E-value=8.6e-13 Score=127.68 Aligned_cols=103 Identities=10% Similarity=-0.048 Sum_probs=80.2
Q ss_pred hccccceecccCCceEEEEEeCCCCEEEEEEecCCch-------------------hhHHHHHHhhc--cccccC----C
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSET-------------------EELAFLETSST--DFRHYN----S 538 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~-------------------~~~~f~~e~~~--~l~H~n----~ 538 (599)
.+...+.||+|+||.||+|...+|+.||||.++.... ....+.+|+.+ +++|++ .
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~~~ 170 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY 170 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCeEE
Confidence 3445578999999999999987799999999964321 13458889888 666666 4
Q ss_pred CCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 539 HTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 539 ~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..+..++||||+++| .+ +.. .+...++.||++||+||| ..+|+||||+
T Consensus 171 ~~~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH---~~giiHrDlk 220 (282)
T 1zar_A 171 AWEGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFY---HRGIVHGDLS 220 (282)
T ss_dssp EEETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred eccceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHH---HCCCEeCCCC
Confidence 456679999999999 55 431 234579999999999999 8899999996
No 388
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.36 E-value=2.3e-13 Score=140.37 Aligned_cols=110 Identities=15% Similarity=0.095 Sum_probs=85.6
Q ss_pred hhccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cc-cccC--------CCCCCcceeecccc
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DF-RHYN--------SHTDNDDSSDEHLA 551 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l-~H~n--------~~~~~~~lv~e~~~ 551 (599)
.+|.....||+|+||+||.....+|+.||||++...... .+.+|+.+ .+ +||| ...+..++||||++
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~--~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS--FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE--ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH--HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 457777889999999865544457999999999654322 24567777 66 8999 45667899999998
Q ss_pred cc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 552 NN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 552 ~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
+. .+++..... ...+.+...++.||++||+||| ..+|+||||+
T Consensus 102 g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlK 145 (432)
T 3p23_A 102 ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLK 145 (432)
T ss_dssp EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCS
T ss_pred CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHH---HCcCEeCCCC
Confidence 77 888875432 2556667899999999999999 7899999996
No 389
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.36 E-value=2.9e-13 Score=138.21 Aligned_cols=110 Identities=15% Similarity=0.063 Sum_probs=83.8
Q ss_pred hccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccccC--------CC----CC--Ccceee
Q 007553 484 DFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRHYN--------SH----TD--NDDSSD 547 (599)
Q Consensus 484 ~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n--------~~----~~--~~~lv~ 547 (599)
.|...+.||+|+||.||+|....+..||+|++...... ..+|+.+ .++||| .. .+ ..++||
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~---~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF---KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS---CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch---HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 46667889999999999999876667999988543221 2257776 899999 11 11 267999
Q ss_pred cccccc-cccccC-CCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN-EHFLSA-PENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G-~~~l~~-~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||++++ .+.+.. ......+++.....++.||++||+||| ..+|+||||+
T Consensus 118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlk 168 (394)
T 4e7w_A 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIK 168 (394)
T ss_dssp ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCC
Confidence 999999 444432 112345899999999999999999999 7899999996
No 390
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.35 E-value=8.1e-13 Score=130.57 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=90.6
Q ss_pred hhhccccceecccCCceEEEEEeCCCCEEEEEEecCCc---hhhHHHHHHhhc--cccc--cC--------CCCCCccee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSE---TEELAFLETSST--DFRH--YN--------SHTDNDDSS 546 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~---~~~~~f~~e~~~--~l~H--~n--------~~~~~~~lv 546 (599)
.++|.....||+|+||.||++...+|+.||||.+.... .....+.+|+.+ +++| || ...+..++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 44577778899999999999998889999999996542 224678889887 7775 77 456678999
Q ss_pred ecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 547 DEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 547 ~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||| .+| .+++..+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 107 ~e~-~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlk 154 (313)
T 3cek_A 107 MEC-GNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLK 154 (313)
T ss_dssp ECC-CSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred Eec-CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCC
Confidence 995 455 8888743 35899999999999999999999 7799999996
No 391
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.35 E-value=4.1e-13 Score=133.49 Aligned_cols=115 Identities=23% Similarity=0.325 Sum_probs=90.9
Q ss_pred HhhhccccceecccCCceEEEEEe--CCCCEEEEEEecCCchh---hHHHHHHhhc-----cccccC--------C----
Q 007553 481 ATEDFHIKYCIGTGGYGSVYRAQL--SSGRVVALKKLHRSETE---ELAFLETSST-----DFRHYN--------S---- 538 (599)
Q Consensus 481 at~~~~~~~~lg~g~~g~v~~~~~--~~g~~vavK~l~~~~~~---~~~f~~e~~~-----~l~H~n--------~---- 538 (599)
+.++|.....||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ .++||| .
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456788888999999999999996 46889999998653221 2356677765 448999 1
Q ss_pred -CCCCcceeecccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 539 -HTDNDDSSDEHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 539 -~~~~~~lv~e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.....++||||+++. .+++.... ...+++.++..++.||++||+||| ..+|+||||+
T Consensus 89 ~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlk 147 (326)
T 1blx_A 89 DRETKLTLVFEHVDQDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLK 147 (326)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCC
T ss_pred CCCceEEEEEecCCCCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCC
Confidence 445678999999966 88887532 234899999999999999999999 7899999986
No 392
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.34 E-value=5.7e-13 Score=137.79 Aligned_cols=109 Identities=19% Similarity=0.048 Sum_probs=81.5
Q ss_pred cccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cc-cccC--------CCCCCcceeecccccc-
Q 007553 486 HIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DF-RHYN--------SHTDNDDSSDEHLANN- 553 (599)
Q Consensus 486 ~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l-~H~n--------~~~~~~~lv~e~~~~G- 553 (599)
...+.||+|+||+||.+...+|+.||||++.... ...+.+|+.+ ++ +||| ...+..++||||+++.
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~gsL 95 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNL 95 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSEEH
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCCCH
Confidence 3457799999999976665679999999986532 3456778887 44 8999 4567789999999755
Q ss_pred cccccCCCCC-C---CCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 554 EHFLSAPENY-E---RVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 554 ~~~l~~~~~~-~---~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+++...... . ..++.++..|+.||+.||+||| ..+|+||||+
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLk 142 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLK 142 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCC
Confidence 8888754321 1 1244457889999999999999 7899999996
No 393
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.34 E-value=2.6e-13 Score=134.08 Aligned_cols=112 Identities=13% Similarity=0.181 Sum_probs=85.0
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh-------hHHHHHHhhc--cc----cccC--------CC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE-------ELAFLETSST--DF----RHYN--------SH 539 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~-------~~~f~~e~~~--~l----~H~n--------~~ 539 (599)
.++|...+.||+|+||.||+|.. .+|+.||||++...... ...+.+|+.+ ++ +||| ..
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 45688888999999999999985 57899999999654321 2234456665 55 8999 45
Q ss_pred CCCcceeecc-cccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 540 TDNDDSSDEH-LANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 540 ~~~~~lv~e~-~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.+..++|+|| +++| .+++..+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 110 ~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlk 166 (312)
T 2iwi_A 110 QEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIK 166 (312)
T ss_dssp ---CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCS
T ss_pred CCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCC
Confidence 6778999999 7777 8888742 24899999999999999999999 7899999986
No 394
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.34 E-value=7.2e-13 Score=134.44 Aligned_cols=112 Identities=13% Similarity=0.060 Sum_probs=88.9
Q ss_pred hhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchhhHHHHHHhhc--ccc-----------ccC-----------
Q 007553 483 EDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETEELAFLETSST--DFR-----------HYN----------- 537 (599)
Q Consensus 483 ~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~-----------H~n----------- 537 (599)
++|.....||+|+||.||+|.. .+|+.||||.+.........+.+|+.+ +++ |||
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 3567778899999999999995 578999999998655445667778776 555 777
Q ss_pred -CCCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCc-cccccccC
Q 007553 538 -SHTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYR-KSYYQRLY 599 (599)
Q Consensus 538 -~~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~-~i~Hrdl~ 599 (599)
..+...++||||+ +| .+++.... ...+++.++..|+.||+.||+||| .. +|+||||+
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dik 159 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIK 159 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCS
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCC
Confidence 1223678999999 55 77776532 234899999999999999999999 65 99999996
No 395
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.31 E-value=1.8e-12 Score=128.33 Aligned_cols=113 Identities=14% Similarity=0.107 Sum_probs=79.8
Q ss_pred hhhccccceecccCCceEEEEEeC-CCCEEEEEEecCCchh--hHHHHHHh-hc--cccccC--------CCCCCcceee
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQLS-SGRVVALKKLHRSETE--ELAFLETS-ST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~~--~~~f~~e~-~~--~l~H~n--------~~~~~~~lv~ 547 (599)
.++|.....||+|+||.||+|... +|+.||||++...... ..++..|. .+ .++||| ...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 456777788999999999999974 6899999999765322 23333343 33 889999 4567789999
Q ss_pred cccccc-cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCc-cccccccC
Q 007553 548 EHLANN-EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYR-KSYYQRLY 599 (599)
Q Consensus 548 e~~~~G-~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~-~i~Hrdl~ 599 (599)
||+.+. ..+.... ...+++.++..++.||++||+||| .. +|+||||+
T Consensus 104 e~~~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlk 152 (318)
T 2dyl_A 104 ELMGTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVK 152 (318)
T ss_dssp CCCSEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCC
T ss_pred eccCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCC
Confidence 999433 4333321 234899999999999999999999 64 99999986
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=2.9e-14 Score=143.60 Aligned_cols=160 Identities=20% Similarity=0.176 Sum_probs=84.8
Q ss_pred CCCCEEeccCCcccccCCccCC-----CCCCCcEEEeecCcCCccCCccc-cCCCcCCEEeeecccccccCCccc-----
Q 007553 68 RDLLELNLSYNILNGSIPLEFG-----NLKDLYDLRLQGNKLDGLIPSSI-GNLTNLTHLDLSLNQLSGRLPQEV----- 136 (599)
Q Consensus 68 ~~L~~L~L~~n~~~~~~p~~~~-----~l~~L~~L~L~~n~~~~~~~~~~-~~l~~L~~L~l~~n~i~~~~~~~l----- 136 (599)
++|++|+|++|.++......+. ..++|++|+|++|.+.+.....+ ..+++|++|++++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4555666666655432222222 12456666666665543222222 224456666666666554322222
Q ss_pred cCCCcccEEecccCccCCC----CcccccCCCCCCeeeccccccccc----CccccCCCCCCCEEEccCCccccc----C
Q 007553 137 GNLKNLVSLFLDNNNLTGP----IPSTLYHLNQLSTLYLAYNNLVGP----LPKEVGNLKNLDSLLLNRNNLTGP----I 204 (599)
Q Consensus 137 ~~l~~L~~L~l~~n~i~~~----~~~~l~~l~~L~~L~l~~n~~~~~----~~~~l~~l~~L~~L~l~~n~~~~~----~ 204 (599)
...++|++|+|++|.++.. ++..+..+++|++|+|++|.+... ++..+...++|++|++++|.+++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2345666666666665532 233345566666666666666532 234455566777777777766542 2
Q ss_pred chhccCCCCCCEEeCCCCcCccc
Q 007553 205 PSTIGFLNLLDELRLSHNRLDGP 227 (599)
Q Consensus 205 ~~~~~~l~~L~~L~l~~n~l~~~ 227 (599)
...+...+.|+.|+|++|.+++.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHH
Confidence 33344556677777777777644
No 397
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.29 E-value=6.2e-13 Score=131.80 Aligned_cols=112 Identities=14% Similarity=0.111 Sum_probs=89.1
Q ss_pred hhhccccceecccCCceEEEEEe-CCCCEEEEEEecCCchh-------hHHHHHHhhc--ccc--ccC--------CCCC
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQL-SSGRVVALKKLHRSETE-------ELAFLETSST--DFR--HYN--------SHTD 541 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~~-~~g~~vavK~l~~~~~~-------~~~f~~e~~~--~l~--H~n--------~~~~ 541 (599)
.++|.....||+|+||.||+|.. .+|+.||||.+...... ...+.+|+.+ +++ ||| ...+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 34577778899999999999985 57899999998654211 2345567776 665 588 4567
Q ss_pred Ccceeeccccc-c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 542 NDDSSDEHLAN-N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 542 ~~~lv~e~~~~-G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
..++|+||+.+ | .+++..+ ..+++.++..++.||++||+||| ..+|+||||+
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlk 176 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIK 176 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred cEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCC
Confidence 78999999987 4 7777742 35899999999999999999999 7899999996
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.27 E-value=6.5e-14 Score=141.07 Aligned_cols=206 Identities=18% Similarity=0.128 Sum_probs=132.7
Q ss_pred CCCCCEEeccCCcccccCCccC--CCCCCCcEEEeecCcCCccCCccccC-----CCcCCEEeeecccccccCCccc-cC
Q 007553 67 LRDLLELNLSYNILNGSIPLEF--GNLKDLYDLRLQGNKLDGLIPSSIGN-----LTNLTHLDLSLNQLSGRLPQEV-GN 138 (599)
Q Consensus 67 l~~L~~L~L~~n~~~~~~p~~~--~~l~~L~~L~L~~n~~~~~~~~~~~~-----l~~L~~L~l~~n~i~~~~~~~l-~~ 138 (599)
++..+.+++.+|...... ..| .-++.|++|+|++|.++......+.. .++|++|++++|.++......+ ..
T Consensus 46 ~~~~~~lnl~~cl~e~~~-~~l~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 124 (372)
T 3un9_A 46 LPPSELLDHLFFHYEFQN-QRFSAEVLSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPV 124 (372)
T ss_dssp SCHHHHHHHHHHHHHHHT-HHHHHHHHTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHH
T ss_pred CChhhhHHHHHHHHHhcC-HHHHHHHHhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHH
Confidence 344556666666332111 111 12467899999999887543333332 3689999999998875433222 34
Q ss_pred CCcccEEecccCccCCCCcccc-----cCCCCCCeeeccccccccc----CccccCCCCCCCEEEccCCccccc----Cc
Q 007553 139 LKNLVSLFLDNNNLTGPIPSTL-----YHLNQLSTLYLAYNNLVGP----LPKEVGNLKNLDSLLLNRNNLTGP----IP 205 (599)
Q Consensus 139 l~~L~~L~l~~n~i~~~~~~~l-----~~l~~L~~L~l~~n~~~~~----~~~~l~~l~~L~~L~l~~n~~~~~----~~ 205 (599)
+++|++|+|++|.++......+ ...++|++|+|++|.+... ++..+..+++|++|++++|.+++. +.
T Consensus 125 L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~ 204 (372)
T 3un9_A 125 FLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA 204 (372)
T ss_dssp HHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH
T ss_pred HHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH
Confidence 6788999999998875433333 3467899999999988642 344556788899999999988642 34
Q ss_pred hhccCCCCCCEEeCCCCcCccc----CcccCCCCCCCCEEEccCCcCCCCCCcccCCC---C--CCCEEe--ccCccee
Q 007553 206 STIGFLNLLDELRLSHNRLDGP----IPPTIGNLTYLTSLDLSSNQLSGLLPREVGNL---K--YLDSLS--LDRNNLI 273 (599)
Q Consensus 206 ~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l---~--~L~~L~--L~~n~l~ 273 (599)
..+...+.|+.|+|++|.+++. +...+...++|++|+|++|.+++.....+..+ . .|+.+. +..+.+.
T Consensus 205 ~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 205 AQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 5667778899999999988753 33345567889999999998875433333222 2 166666 5555554
No 399
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.27 E-value=2.5e-12 Score=136.02 Aligned_cols=98 Identities=12% Similarity=0.083 Sum_probs=74.3
Q ss_pred ccceecccCCceEEEEEeCCCCEEEEEEecCCch-----h----hHHHHHHhhc--cccccC--------CCCCCcceee
Q 007553 487 IKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSET-----E----ELAFLETSST--DFRHYN--------SHTDNDDSSD 547 (599)
Q Consensus 487 ~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~-----~----~~~f~~e~~~--~l~H~n--------~~~~~~~lv~ 547 (599)
..+.||+|+||.||+|.. .+..+|+|+...... . .+.|.+|+++ +++||| ...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 356799999999999965 588899998643221 1 2358899998 999999 3567789999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||+++| .+++.. +..++.||++||+||| ..+|+|||||
T Consensus 419 E~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH---~~gIiHrDiK 458 (540)
T 3en9_A 419 SYINGKLAKDVIED-----------NLDIAYKIGEIVGKLH---KNDVIHNDLT 458 (540)
T ss_dssp ECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHH---HTTEECTTCC
T ss_pred ECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHH---HCcCccCCCC
Confidence 999999 888873 5689999999999999 7899999997
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=9.8e-12 Score=124.66 Aligned_cols=104 Identities=23% Similarity=0.256 Sum_probs=70.4
Q ss_pred EEEcccC-cCcccCCcCCCCCCCCCEEeccC-CcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeec
Q 007553 48 VLDLSYN-RLTGTIPSEIGSLRDLLELNLSY-NILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSL 125 (599)
Q Consensus 48 ~L~l~~n-~~~~~~~~~~~~l~~L~~L~L~~-n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~ 125 (599)
.++++++ .++ .+|. +..+++|++|+|++ |.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3466666 666 4666 66777777777774 777766666677777777777777777766666677777777777777
Q ss_pred ccccccCCccccCCCcccEEecccCccCC
Q 007553 126 NQLSGRLPQEVGNLKNLVSLFLDNNNLTG 154 (599)
Q Consensus 126 n~i~~~~~~~l~~l~~L~~L~l~~n~i~~ 154 (599)
|.+++..+..+..++ |+.|+|.+|.+..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 777755555555554 7777777776653
No 401
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.20 E-value=1.1e-08 Score=103.74 Aligned_cols=301 Identities=10% Similarity=0.074 Sum_probs=172.3
Q ss_pred CCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCE
Q 007553 41 GALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTH 120 (599)
Q Consensus 41 ~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~ 120 (599)
....+|+.+.+... ++.+-..+|.++.+|+.++|..+ ++.....+|.++ +|+.+.+..+ +..+....|.. .+|+.
T Consensus 43 ~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~ 117 (379)
T 4h09_A 43 KDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDD 117 (379)
T ss_dssp GGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSE
T ss_pred ccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCccc
Confidence 34455666666433 44344455666666666666544 443445556655 4555555432 33233334443 35666
Q ss_pred EeeecccccccCCccccCCCcccEEecccCccCCCCcccccCCCCCCeeeccccccc------------ccCccccCCCC
Q 007553 121 LDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTGPIPSTLYHLNQLSTLYLAYNNLV------------GPLPKEVGNLK 188 (599)
Q Consensus 121 L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~------------~~~~~~l~~l~ 188 (599)
+.+..+ +.......+.+. +|+.+.+-.+ ++......|..+..++.+.+..+... ......+....
T Consensus 118 i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 118 FEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp EECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred ccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 666543 222223333332 3444443322 22222334555555555555432211 01122334445
Q ss_pred CCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEecc
Q 007553 189 NLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLDLSSNQLSGLLPREVGNLKYLDSLSLD 268 (599)
Q Consensus 189 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~ 268 (599)
.+..+.+..... ......+..+..|+.+.+..+ +.......|..+..|+.+.+..+ ++......|..+.+|+.+.+.
T Consensus 195 ~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~ 271 (379)
T 4h09_A 195 TGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFY 271 (379)
T ss_dssp CCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred ccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccc
Confidence 555555544322 133345666777888877654 33344556778888888888665 444555677888888888886
Q ss_pred CcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCccCCCccccCCCCCCEEeCCCccccccC
Q 007553 269 RNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSGSIPSEIGNLIHLRQLDLSHNFINGTI 348 (599)
Q Consensus 269 ~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 348 (599)
.+ +.......|..+.+|+.+.+.++.+...-..+|.+|.+|+.+.+..+ ++..-..+|.++.+|+.+.+..+ ++..-
T Consensus 272 ~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~ 348 (379)
T 4h09_A 272 AK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIE 348 (379)
T ss_dssp CC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEEC
T ss_pred cc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEc
Confidence 54 44344556788888999988888777666678888889999988654 54444567888888988888654 55444
Q ss_pred CcccCCC
Q 007553 349 PSQLGKI 355 (599)
Q Consensus 349 ~~~~~~~ 355 (599)
..+|...
T Consensus 349 ~~aF~~c 355 (379)
T 4h09_A 349 SGAFEGS 355 (379)
T ss_dssp TTTTTTS
T ss_pred hhHhhCC
Confidence 4555544
No 402
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.19 E-value=6.2e-12 Score=129.11 Aligned_cols=115 Identities=10% Similarity=-0.038 Sum_probs=83.6
Q ss_pred hhhccccceecccCCceEEEEE-eCCCCEEEEEEecCCch----hhHHHHHHhhc--cccc-cC------C---------
Q 007553 482 TEDFHIKYCIGTGGYGSVYRAQ-LSSGRVVALKKLHRSET----EELAFLETSST--DFRH-YN------S--------- 538 (599)
Q Consensus 482 t~~~~~~~~lg~g~~g~v~~~~-~~~g~~vavK~l~~~~~----~~~~f~~e~~~--~l~H-~n------~--------- 538 (599)
++.|...+.||+|+||.||+|. ..+|+.||||++..... ....|.+|+.+ .++| +| .
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 4456677889999999999999 45799999999874322 14568888877 7766 22 0
Q ss_pred -------------C------CCCcceeecccccc-cccccC----CCCCCCCChHHHHHHHHHHHHHHhhhhCCCCcccc
Q 007553 539 -------------H------TDNDDSSDEHLANN-EHFLSA----PENYERVDFSPDFSIADQSKKGFKLLADRKYRKSY 594 (599)
Q Consensus 539 -------------~------~~~~~lv~e~~~~G-~~~l~~----~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~ 594 (599)
. ....+++|+++.+. .++++. ......++|..++.|+.||++||+||| ..+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp EECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred cccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 0 12235566655544 666631 122345889999999999999999999 78999
Q ss_pred ccccC
Q 007553 595 YQRLY 599 (599)
Q Consensus 595 Hrdl~ 599 (599)
|||||
T Consensus 234 HrDiK 238 (413)
T 3dzo_A 234 HTYLR 238 (413)
T ss_dssp CSCCC
T ss_pred cCCcc
Confidence 99997
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.16 E-value=7.5e-11 Score=118.16 Aligned_cols=104 Identities=23% Similarity=0.206 Sum_probs=77.3
Q ss_pred CEEeccCC-cccccCCccCCCCCCCcEEEeec-CcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecc
Q 007553 71 LELNLSYN-ILNGSIPLEFGNLKDLYDLRLQG-NKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLD 148 (599)
Q Consensus 71 ~~L~L~~n-~~~~~~p~~~~~l~~L~~L~L~~-n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~ 148 (599)
..++++++ .++ .+|. |..+++|++|+|++ |.+.+..+..|..+++|++|+|++|++++..|+.|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35677777 777 4666 88888888888885 88877766778888888888888888887777777888888888888
Q ss_pred cCccCCCCcccccCCCCCCeeeccccccc
Q 007553 149 NNNLTGPIPSTLYHLNQLSTLYLAYNNLV 177 (599)
Q Consensus 149 ~n~i~~~~~~~l~~l~~L~~L~l~~n~~~ 177 (599)
+|++++..+..|..++ |+.|+|.+|.+.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 8887765555555544 777777776655
No 404
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.16 E-value=9.8e-09 Score=104.04 Aligned_cols=303 Identities=12% Similarity=0.055 Sum_probs=196.1
Q ss_pred ccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccCcCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCC
Q 007553 15 FTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDL 94 (599)
Q Consensus 15 l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 94 (599)
+....+|+.+.+. ..++.--..+|.+|.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++.....+|... +|
T Consensus 42 ~~~~~~i~~v~ip--~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L 115 (379)
T 4h09_A 42 YKDRDRISEVRVN--SGITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DL 115 (379)
T ss_dssp GGGGGGCSEEEEC--TTEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CC
T ss_pred cccccCCEEEEeC--CCccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Cc
Confidence 4455677888876 3555444556788888888888654 554556677776 5777777654 443445566654 68
Q ss_pred cEEEeecCcCCccCCccccCCCcCCEEeeecccccccCCccccCCCcccEEecccCccCC------------CCcccccC
Q 007553 95 YDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLKNLVSLFLDNNNLTG------------PIPSTLYH 162 (599)
Q Consensus 95 ~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~------------~~~~~l~~ 162 (599)
+.+.+..+ +.......|.+. +|+.+.+..+ ++......+.++.+++.+.+..+.... .....+..
T Consensus 116 ~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (379)
T 4h09_A 116 DDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPA 192 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCT
T ss_pred ccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccc
Confidence 88888664 222333444443 5666555433 333445566777777777766543221 11223444
Q ss_pred CCCCCeeecccccccccCccccCCCCCCCEEEccCCcccccCchhccCCCCCCEEeCCCCcCcccCcccCCCCCCCCEEE
Q 007553 163 LNQLSTLYLAYNNLVGPLPKEVGNLKNLDSLLLNRNNLTGPIPSTIGFLNLLDELRLSHNRLDGPIPPTIGNLTYLTSLD 242 (599)
Q Consensus 163 l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 242 (599)
...+..+.+.... .......+....+|+.+.+..+ +.......+..+..|+.+.+..+ ++......|..+.+|+.+.
T Consensus 193 ~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 193 AKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp TCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 5556665554332 2233455667788888887654 33334456778888999988765 5545556788889999998
Q ss_pred ccCCcCCCCCCcccCCCCCCCEEeccCcceeecCCcCccCCCCCCEEECCCCCCccCCCccCcCCCCCCEEEcccCcCcc
Q 007553 243 LSSNQLSGLLPREVGNLKYLDSLSLDRNNLIGPIPPTIGYLTNLTSLNLGYNQLNSSIPPELMNCSQLQNLAVNHNSLSG 322 (599)
Q Consensus 243 l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 322 (599)
+..+ +.......|..+++|+.+.+.++.+.......|.++.+|+.+.|..+ ++.+-..+|.+|.+|+.+.+..+ ++.
T Consensus 270 l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~ 346 (379)
T 4h09_A 270 FYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITL 346 (379)
T ss_dssp ECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCE
T ss_pred cccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCE
Confidence 8654 44445567888999999999888877666678889999999999754 55555678899999999988654 443
Q ss_pred CCCccccCCC
Q 007553 323 SIPSEIGNLI 332 (599)
Q Consensus 323 ~~~~~~~~l~ 332 (599)
.-..+|.++.
T Consensus 347 I~~~aF~~c~ 356 (379)
T 4h09_A 347 IESGAFEGSS 356 (379)
T ss_dssp ECTTTTTTSS
T ss_pred EchhHhhCCC
Confidence 3445666554
No 405
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.15 E-value=1.4e-11 Score=117.78 Aligned_cols=110 Identities=14% Similarity=-0.001 Sum_probs=77.7
Q ss_pred cccceecccCCceEEEEEe-CCCCE--EEEEEecCCchh-------------------------hHHHHHHhhc--cccc
Q 007553 486 HIKYCIGTGGYGSVYRAQL-SSGRV--VALKKLHRSETE-------------------------ELAFLETSST--DFRH 535 (599)
Q Consensus 486 ~~~~~lg~g~~g~v~~~~~-~~g~~--vavK~l~~~~~~-------------------------~~~f~~e~~~--~l~H 535 (599)
.....||+|+||.||+|.. .+|+. ||||.++..... ...+.+|+.. +++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 3456799999999999997 67988 999987543111 1256778877 7777
Q ss_pred cC------CCCCCcceeeccccc-c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 536 YN------SHTDNDDSSDEHLAN-N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 536 ~n------~~~~~~~lv~e~~~~-G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
++ ...+..++||||+.+ | ...|..... ..++.+...++.||+.||.|||. ..+|+||||+
T Consensus 130 ~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~--~~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 130 AGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGR--ELKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp TTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGG--GGGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred CCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhh--ccChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 75 233456899999953 5 333332110 12355688999999999999993 3599999996
No 406
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.15 E-value=1.4e-11 Score=131.17 Aligned_cols=100 Identities=12% Similarity=0.049 Sum_probs=71.0
Q ss_pred ecccCCceEEEEE-eCCCCEEEEEEecCCc-----------hhhHHHHHHhhc--cc-cccC--------CCCCCcceee
Q 007553 491 IGTGGYGSVYRAQ-LSSGRVVALKKLHRSE-----------TEELAFLETSST--DF-RHYN--------SHTDNDDSSD 547 (599)
Q Consensus 491 lg~g~~g~v~~~~-~~~g~~vavK~l~~~~-----------~~~~~f~~e~~~--~l-~H~n--------~~~~~~~lv~ 547 (599)
.+.|+.|.+..++ +--|+.+|||.+.... ...++|.+|+++ ++ .|+| .+.+..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4455555555433 2358899999986431 113579999998 77 7888 4678899999
Q ss_pred cccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 548 EHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 548 e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
||++|| .++|... .+++.. +|+.||+.||+|+| ..+|||||||
T Consensus 322 Eyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIK 366 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALE---KQGFWHDDVR 366 (569)
T ss_dssp ECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCC
T ss_pred ecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHH---HCCceeccCc
Confidence 999999 8888853 235543 58999999999999 8999999997
No 407
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.98 E-value=3.6e-10 Score=112.18 Aligned_cols=103 Identities=10% Similarity=-0.009 Sum_probs=70.0
Q ss_pred ccccceecccCCceEEEEEeCCCCEEEEEEecCCchh---------------hHHHH--------HHhhc--cccccCC-
Q 007553 485 FHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETE---------------ELAFL--------ETSST--DFRHYNS- 538 (599)
Q Consensus 485 ~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~---------------~~~f~--------~e~~~--~l~H~n~- 538 (599)
+.....||+|++|.||+|.-.+|+.||||.++..... ...+. +|... ++.++..
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4456789999999999999888999999987542110 11111 23322 4444431
Q ss_pred -----CCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCCCCccccccccC
Q 007553 539 -----HTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADRKYRKSYYQRLY 599 (599)
Q Consensus 539 -----~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~~~~~i~Hrdl~ 599 (599)
.....++||||++++ .++.. ......++.||+.||.||| ..+||||||+
T Consensus 177 vp~p~~~~~~~LVME~i~G~~L~~l~~---------~~~~~~l~~qll~~l~~lH---~~gIVHrDLK 232 (397)
T 4gyi_A 177 VPEPIAQSRHTIVMSLVDALPMRQVSS---------VPDPASLYADLIALILRLA---KHGLIHGDFN 232 (397)
T ss_dssp CCCEEEEETTEEEEECCSCEEGGGCCC---------CSCHHHHHHHHHHHHHHHH---HTTEECSCCS
T ss_pred CCeeeeccCceEEEEecCCccHhhhcc---------cHHHHHHHHHHHHHHHHHH---HCCCcCCCCC
Confidence 112236999999877 43332 1234568899999999999 6799999996
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.97 E-value=1.4e-10 Score=115.69 Aligned_cols=180 Identities=17% Similarity=0.130 Sum_probs=101.3
Q ss_pred ccCCCCCCCEEEcccCcCc---------ccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCCccCC
Q 007553 39 ETGALSRLKVLDLSYNRLT---------GTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLDGLIP 109 (599)
Q Consensus 39 ~~~~~~~L~~L~l~~n~~~---------~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~~ 109 (599)
....+++|+.|.+.+.... +.++..+..+|+|+.|+|++|.-. .++. + .+++|++|+|..|.+.....
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l 210 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVV 210 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHH
Confidence 3445566666666543221 112233345677777777776311 1222 3 26777777777776653322
Q ss_pred cccc--CCCcCCEEeeec--cccccc-----CCccc--cCCCcccEEecccCccCCCCcccc---cCCCCCCeeeccccc
Q 007553 110 SSIG--NLTNLTHLDLSL--NQLSGR-----LPQEV--GNLKNLVSLFLDNNNLTGPIPSTL---YHLNQLSTLYLAYNN 175 (599)
Q Consensus 110 ~~~~--~l~~L~~L~l~~--n~i~~~-----~~~~l--~~l~~L~~L~l~~n~i~~~~~~~l---~~l~~L~~L~l~~n~ 175 (599)
..+. .+++|++|+|+. +...+. +...+ ..+++|++|++.+|.+....+..+ ..+++|++|+|+.|.
T Consensus 211 ~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 211 EDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGV 290 (362)
T ss_dssp HHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSC
T ss_pred HHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCC
Confidence 3333 577777777753 111110 11122 246788888888887764332222 246788888888887
Q ss_pred cccc----CccccCCCCCCCEEEccCCcccccCchhccC-CCCCCEEeCCCCc
Q 007553 176 LVGP----LPKEVGNLKNLDSLLLNRNNLTGPIPSTIGF-LNLLDELRLSHNR 223 (599)
Q Consensus 176 ~~~~----~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~-l~~L~~L~l~~n~ 223 (599)
+.+. ++..+..+++|+.|+++.|.++...-..+.. + ...++++.+.
T Consensus 291 L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 291 LTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp CBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 7653 2333345688888888888776433332322 1 3557777765
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.95 E-value=2.2e-10 Score=114.29 Aligned_cols=199 Identities=16% Similarity=0.160 Sum_probs=129.1
Q ss_pred CCCCEEEcccCcCcc-c-------CCcCCCCCCCCCEEeccCCccc---------ccCCccCCCCCCCcEEEeecCcCCc
Q 007553 44 SRLKVLDLSYNRLTG-T-------IPSEIGSLRDLLELNLSYNILN---------GSIPLEFGNLKDLYDLRLQGNKLDG 106 (599)
Q Consensus 44 ~~L~~L~l~~n~~~~-~-------~~~~~~~l~~L~~L~L~~n~~~---------~~~p~~~~~l~~L~~L~L~~n~~~~ 106 (599)
..++.|.+......+ . +..+...+++|+.|.+...... +.++..+..+++|+.|+|++|.-..
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 456777776544331 1 1233456789999999765321 1123344678999999999984222
Q ss_pred cCCccccCCCcCCEEeeecccccccCCcccc--CCCcccEEeccc--CccCCC-----Ccccc--cCCCCCCeeeccccc
Q 007553 107 LIPSSIGNLTNLTHLDLSLNQLSGRLPQEVG--NLKNLVSLFLDN--NNLTGP-----IPSTL--YHLNQLSTLYLAYNN 175 (599)
Q Consensus 107 ~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~--~l~~L~~L~l~~--n~i~~~-----~~~~l--~~l~~L~~L~l~~n~ 175 (599)
++. +. +++|++|++..|.+.......+. .+++|+.|+|+. |...+. +...+ ..+++|++|+|.+|.
T Consensus 187 -l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 187 -IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp -CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred -ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 333 43 89999999999887654333443 789999999863 221111 11223 257899999999998
Q ss_pred ccccCcccc---CCCCCCCEEEccCCccccc----CchhccCCCCCCEEeCCCCcCcccCcccCCC-CCCCCEEEccCCc
Q 007553 176 LVGPLPKEV---GNLKNLDSLLLNRNNLTGP----IPSTIGFLNLLDELRLSHNRLDGPIPPTIGN-LTYLTSLDLSSNQ 247 (599)
Q Consensus 176 ~~~~~~~~l---~~l~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~ 247 (599)
+....+..+ ..+++|++|+++.|.+.+. ++..+..+++|+.|++++|.++...-..+.. + ...++++.++
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 865333233 3578999999999988753 3333456789999999999887543333332 2 3568888776
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.48 E-value=1.6e-08 Score=90.96 Aligned_cols=16 Identities=6% Similarity=0.169 Sum_probs=7.6
Q ss_pred CCCCCcEEEeecCcCC
Q 007553 90 NLKDLYDLRLQGNKLD 105 (599)
Q Consensus 90 ~l~~L~~L~L~~n~~~ 105 (599)
..++|++|+|++|.+.
T Consensus 63 ~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 63 TNTYVKKFSIVGTRSN 78 (185)
T ss_dssp TCCSCCEEECTTSCCC
T ss_pred hCCCcCEEECcCCCCC
Confidence 3444555555555443
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.45 E-value=1.8e-08 Score=90.52 Aligned_cols=115 Identities=10% Similarity=0.101 Sum_probs=72.2
Q ss_pred cccCCCCCCCEEEcccC-cCccc----CCcCCCCCCCCCEEeccCCcccccC----CccCCCCCCCcEEEeecCcCCcc-
Q 007553 38 SETGALSRLKVLDLSYN-RLTGT----IPSEIGSLRDLLELNLSYNILNGSI----PLEFGNLKDLYDLRLQGNKLDGL- 107 (599)
Q Consensus 38 ~~~~~~~~L~~L~l~~n-~~~~~----~~~~~~~l~~L~~L~L~~n~~~~~~----p~~~~~l~~L~~L~L~~n~~~~~- 107 (599)
..+..++.|++|+|++| .+.+. +...+...++|++|+|++|.+.... ...+...++|++|+|++|.+.+.
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34567888999999988 77632 3344566788999999999886532 23344557788888888887643
Q ss_pred ---CCccccCCCcCCEEee--eccccccc----CCccccCCCcccEEecccCcc
Q 007553 108 ---IPSSIGNLTNLTHLDL--SLNQLSGR----LPQEVGNLKNLVSLFLDNNNL 152 (599)
Q Consensus 108 ---~~~~~~~l~~L~~L~l--~~n~i~~~----~~~~l~~l~~L~~L~l~~n~i 152 (599)
+...+...++|++|++ ++|.+... +...+...+.|++|++++|.+
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2344555566666666 55666543 222333445555555555544
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.35 E-value=2.3e-08 Score=94.39 Aligned_cols=80 Identities=31% Similarity=0.439 Sum_probs=49.3
Q ss_pred CCCCCCcEEEeecCcCCcc--CCccccCCCcCCEEeeecccccccCCccccCCC--cccEEecccCccCCCCc-------
Q 007553 89 GNLKDLYDLRLQGNKLDGL--IPSSIGNLTNLTHLDLSLNQLSGRLPQEVGNLK--NLVSLFLDNNNLTGPIP------- 157 (599)
Q Consensus 89 ~~l~~L~~L~L~~n~~~~~--~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~--~L~~L~l~~n~i~~~~~------- 157 (599)
.++++|+.|+|++|++.+. +|..+..+++|+.|+|++|.+.+. ..+..++ +|++|+|++|.+.+.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 3466677777777776653 334555677777777777776644 2233333 77777777777765443
Q ss_pred ccccCCCCCCeee
Q 007553 158 STLYHLNQLSTLY 170 (599)
Q Consensus 158 ~~l~~l~~L~~L~ 170 (599)
..+..+|+|+.|+
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2355677777765
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.33 E-value=3.3e-08 Score=93.33 Aligned_cols=79 Identities=27% Similarity=0.297 Sum_probs=49.3
Q ss_pred CCCCCCEEeccCCcccc--cCCccCCCCCCCcEEEeecCcCCccCCccccCCC--cCCEEeeecccccccCC-------c
Q 007553 66 SLRDLLELNLSYNILNG--SIPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLT--NLTHLDLSLNQLSGRLP-------Q 134 (599)
Q Consensus 66 ~l~~L~~L~L~~n~~~~--~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~--~L~~L~l~~n~i~~~~~-------~ 134 (599)
++++|++|+|++|.+++ .+|..+..+++|+.|+|++|++.+. ..+..+. +|++|++++|.+.+..| .
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 46667777777777765 3344455677777777777777654 2233333 67777777777765444 2
Q ss_pred cccCCCcccEEe
Q 007553 135 EVGNLKNLVSLF 146 (599)
Q Consensus 135 ~l~~l~~L~~L~ 146 (599)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 356677777776
No 414
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.24 E-value=3.4e-07 Score=79.94 Aligned_cols=83 Identities=11% Similarity=0.136 Sum_probs=41.7
Q ss_pred CCCEEeccCCcccccCCccCCCCCCCcEEEeecCc-CCccCCccccCC----CcCCEEeeeccc-ccccCCccccCCCcc
Q 007553 69 DLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNK-LDGLIPSSIGNL----TNLTHLDLSLNQ-LSGRLPQEVGNLKNL 142 (599)
Q Consensus 69 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~-~~~~~~~~~~~l----~~L~~L~l~~n~-i~~~~~~~l~~l~~L 142 (599)
+|+.||+++|.++...-..+.++++|++|+|++|. +++..-..++.+ ++|++|++++|. |++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555544333344555555555555553 433222333332 246666666653 544333345556666
Q ss_pred cEEecccCc
Q 007553 143 VSLFLDNNN 151 (599)
Q Consensus 143 ~~L~l~~n~ 151 (599)
+.|+++++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 415
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.21 E-value=6e-07 Score=78.40 Aligned_cols=92 Identities=12% Similarity=0.127 Sum_probs=59.7
Q ss_pred CCccCCCCCCCcEEEeecCcCCccCCccccCCCcCCEEeeeccc-ccccCCccccCC----CcccEEecccCc-cCCCCc
Q 007553 84 IPLEFGNLKDLYDLRLQGNKLDGLIPSSIGNLTNLTHLDLSLNQ-LSGRLPQEVGNL----KNLVSLFLDNNN-LTGPIP 157 (599)
Q Consensus 84 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~l~~l----~~L~~L~l~~n~-i~~~~~ 157 (599)
+|.....-.+|++||+++|.+++..-..+..+++|++|+|++|. +++..-..++.+ ++|++|++++|. ++..--
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 34433333578888888888876655667788888888888884 665433445553 367777777764 654433
Q ss_pred ccccCCCCCCeeeccccc
Q 007553 158 STLYHLNQLSTLYLAYNN 175 (599)
Q Consensus 158 ~~l~~l~~L~~L~l~~n~ 175 (599)
..+..+++|++|+|++|.
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 345566777777777664
No 416
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.30 E-value=3.5e-05 Score=68.55 Aligned_cols=12 Identities=8% Similarity=-0.094 Sum_probs=5.2
Q ss_pred CCCCCEEEccCC
Q 007553 187 LKNLDSLLLNRN 198 (599)
Q Consensus 187 l~~L~~L~l~~n 198 (599)
.+.|+.|+++.|
T Consensus 156 N~tL~~L~l~~~ 167 (197)
T 1pgv_A 156 NESLLRVGISFA 167 (197)
T ss_dssp CSSCCEEECCCC
T ss_pred CCCcCeEeccCC
Confidence 344444444433
No 417
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.30 E-value=0.00036 Score=66.08 Aligned_cols=98 Identities=9% Similarity=-0.032 Sum_probs=64.5
Q ss_pred HhhhccccceecccCCceEEEEEeCCCCEEEEEEecCCc-hhhHHHHHHhhc--ccc-c---cC-----CCCCCcceeec
Q 007553 481 ATEDFHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSE-TEELAFLETSST--DFR-H---YN-----SHTDNDDSSDE 548 (599)
Q Consensus 481 at~~~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~-~~~~~f~~e~~~--~l~-H---~n-----~~~~~~~lv~e 548 (599)
...++......+.|+.+.||+... .|..+++|+..... .....+.+|+.+ .+. | |. ...+..++|||
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e 90 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS 90 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred HhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence 344555555677788899999885 47899999986421 112346666665 332 2 22 34456789999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLAD 587 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~ 587 (599)
|++|. .+.+. +..+...++.+++++|+.||+
T Consensus 91 ~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~ 123 (263)
T 3tm0_A 91 EADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHS 123 (263)
T ss_dssp CCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHH
T ss_pred ecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhC
Confidence 99988 43321 112345789999999999996
No 418
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=97.23 E-value=0.00032 Score=66.27 Aligned_cols=84 Identities=8% Similarity=-0.048 Sum_probs=55.0
Q ss_pred cccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--ccc-----ccC-----CCCCCcceeecccccc-ccccc
Q 007553 492 GTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFR-----HYN-----SHTDNDDSSDEHLANN-EHFLS 558 (599)
Q Consensus 492 g~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~-----H~n-----~~~~~~~lv~e~~~~G-~~~l~ 558 (599)
+.|..+.||+....+|..++||...... ...+..|+.+ .+. -|. ..++..++||||++++ -+ ..
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~--~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-~~ 105 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-SS 105 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT-TS
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc--chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC-cC
Confidence 3556689999988778889999876531 1234455554 332 232 2344579999999987 43 22
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHhhhhC
Q 007553 559 APENYERVDFSPDFSIADQSKKGFKLLAD 587 (599)
Q Consensus 559 ~~~~~~~l~~~~~~~ia~~ia~gl~yLH~ 587 (599)
. . +...++.++++.|+.||.
T Consensus 106 ~------~---~~~~~~~~l~~~l~~lh~ 125 (264)
T 1nd4_A 106 H------L---APAEKVSIMADAMRRLHT 125 (264)
T ss_dssp C------C---CHHHHHHHHHHHHHHHTT
T ss_pred c------C---CHhHHHHHHHHHHHHHhC
Confidence 1 1 134678889999999995
No 419
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.22 E-value=0.00011 Score=65.27 Aligned_cols=61 Identities=15% Similarity=0.122 Sum_probs=25.9
Q ss_pred ccCCCcccEEecccCccCCC----CcccccCCCCCCeeeccccccccc----CccccCCCCCCCEEEcc
Q 007553 136 VGNLKNLVSLFLDNNNLTGP----IPSTLYHLNQLSTLYLAYNNLVGP----LPKEVGNLKNLDSLLLN 196 (599)
Q Consensus 136 l~~l~~L~~L~l~~n~i~~~----~~~~l~~l~~L~~L~l~~n~~~~~----~~~~l~~l~~L~~L~l~ 196 (599)
+..-+.|++|+|++|.+... +.+.+...+.|++|+|++|.|... +.+.+...+.|++|+|+
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~ 134 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKAD 134 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECC
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECC
Confidence 33344444444444444421 223333444455555555544421 22233333445555554
No 420
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=96.84 E-value=0.002 Score=64.05 Aligned_cols=94 Identities=7% Similarity=0.001 Sum_probs=60.5
Q ss_pred cceecccCCceEEEEEeCCCCEEEEEEec--CCch--hhHHHHHHhhc--ccc-----ccC-----CCC---CCcceeec
Q 007553 488 KYCIGTGGYGSVYRAQLSSGRVVALKKLH--RSET--EELAFLETSST--DFR-----HYN-----SHT---DNDDSSDE 548 (599)
Q Consensus 488 ~~~lg~g~~g~v~~~~~~~g~~vavK~l~--~~~~--~~~~f~~e~~~--~l~-----H~n-----~~~---~~~~lv~e 548 (599)
...++.|.++.||+.... +..+++|+.. .... ....+.+|..+ .+. .|. ... +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 345888999999998875 4678888776 3321 12345556655 333 333 122 34789999
Q ss_pred ccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhC
Q 007553 549 HLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLAD 587 (599)
Q Consensus 549 ~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~ 587 (599)
|+++. .+... ..++..++..++.++++.|+.||.
T Consensus 122 ~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~ 157 (359)
T 3dxp_A 122 FVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHT 157 (359)
T ss_dssp CCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhC
Confidence 99977 32111 126788899999999999999995
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.50 E-value=0.0043 Score=51.35 Aligned_cols=57 Identities=26% Similarity=0.264 Sum_probs=36.3
Q ss_pred CEEEcccCcCc-ccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeecCcCC
Q 007553 47 KVLDLSYNRLT-GTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQGNKLD 105 (599)
Q Consensus 47 ~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 105 (599)
.+++.+++.++ ..+|..+ -++|++|+|++|+++...+..|..+++|++|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36677777665 2445332 235777777777777655566677777777777777654
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.35 E-value=0.0062 Score=50.37 Aligned_cols=59 Identities=17% Similarity=0.280 Sum_probs=32.8
Q ss_pred EEEcccCcCc-cCCCccccCCCCCCEEeCCCccccccCCcccCCCCCCCEEECCCCcCcccC
Q 007553 312 NLAVNHNSLS-GSIPSEIGNLIHLRQLDLSHNFINGTIPSQLGKIPNVSEVDVSKNNLSGVI 372 (599)
Q Consensus 312 ~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~ 372 (599)
.++-+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|++.+.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 4444555543 13333221 34666666666666555555666666777777777666543
No 423
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=96.08 E-value=0.0071 Score=57.89 Aligned_cols=87 Identities=13% Similarity=0.036 Sum_probs=61.9
Q ss_pred ccceecccCCceEEEEEeCCCCEEEEEEecCCch-hhHHHHHHhhc--cccccC-------CCCCCcceeeccccccccc
Q 007553 487 IKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSET-EELAFLETSST--DFRHYN-------SHTDNDDSSDEHLANNEHF 556 (599)
Q Consensus 487 ~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~-~~~~f~~e~~~--~l~H~n-------~~~~~~~lv~e~~~~G~~~ 556 (599)
....++.|.++.||+....+|..++||+...... ....|..|++. .++|.+ ...+..++||||++++.
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~~~~lvme~l~g~~-- 96 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDERP-- 96 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCCC--
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEecCcEEEEEecccCC--
Confidence 3456899999999999988899999998654321 13567888887 666643 22234689999999771
Q ss_pred ccCCCCCCCCChHHHHHHHHHHHHHHhhhhCC
Q 007553 557 LSAPENYERVDFSPDFSIADQSKKGFKLLADR 588 (599)
Q Consensus 557 l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~ 588 (599)
++. ..+.++++.|+-||..
T Consensus 97 ---------~~~----~~~~~lg~~LA~LH~~ 115 (288)
T 3d1u_A 97 ---------PTP----EAAERFGHQLAAMHLA 115 (288)
T ss_dssp ---------CCH----HHHHHHHHHHHHHHHT
T ss_pred ---------CCh----HHHHHHHHHHHHHHcC
Confidence 011 2466888999999954
No 424
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=93.68 E-value=0.06 Score=34.11 Aligned_cols=27 Identities=22% Similarity=0.353 Sum_probs=11.6
Q ss_pred eEeehHH-HHHHHHHHHHHhhhhhcccc
Q 007553 422 LVTIILP-MVAFLALIFGILFVHRRMDE 448 (599)
Q Consensus 422 ~~~~~~~-~~~~~~~~~~~~~~~rr~~~ 448 (599)
+++++++ ++++++++++++++.||++.
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 3344443 33333444444444454443
No 425
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=92.47 E-value=0.18 Score=48.31 Aligned_cols=89 Identities=10% Similarity=0.045 Sum_probs=56.2
Q ss_pred ceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cc-cc-----cC----C-CCC---Ccceeeccccc
Q 007553 489 YCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DF-RH-----YN----S-HTD---NDDSSDEHLAN 552 (599)
Q Consensus 489 ~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l-~H-----~n----~-~~~---~~~lv~e~~~~ 552 (599)
..++.|....||+.. ..+++|.-... .....+.+|.++ .+ .| |. . ..+ ..++||||++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 447888888998753 45778875432 223456666665 33 22 22 1 122 34788999997
Q ss_pred c--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhC
Q 007553 553 N--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLAD 587 (599)
Q Consensus 553 G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~ 587 (599)
. .+... ..++..++..++.++++.++.||.
T Consensus 101 ~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~ 132 (304)
T 3sg8_A 101 VPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHS 132 (304)
T ss_dssp EECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHc
Confidence 7 32111 126777888899999999999995
No 426
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=91.59 E-value=0.39 Score=46.40 Aligned_cols=93 Identities=6% Similarity=-0.034 Sum_probs=63.4
Q ss_pred ccccceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccc-------cC-CCCCCcceeecccccc-
Q 007553 485 FHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRH-------YN-SHTDNDDSSDEHLANN- 553 (599)
Q Consensus 485 ~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H-------~n-~~~~~~~lv~e~~~~G- 553 (599)
......++.|....||+. |..+++|...... ....+..|.++ .+.+ |. ...+..++||||+++.
T Consensus 39 i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~~~~~lvme~i~G~~ 113 (320)
T 3r70_A 39 INELRYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQSDRFNIMKYIKGER 113 (320)
T ss_dssp CSCEEEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEECSSCEEEECCCCBC
T ss_pred eEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEecCCcEEEEeecCCcc
Confidence 344556889999999987 6667888764322 23446677765 4544 22 1225678999999977
Q ss_pred -cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhC
Q 007553 554 -EHFLSAPENYERVDFSPDFSIADQSKKGFKLLAD 587 (599)
Q Consensus 554 -~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~ 587 (599)
.+... ..++..++..++.++++.++.||.
T Consensus 114 l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~ 143 (320)
T 3r70_A 114 ITYEQY-----HKLSEKEKDALAYDEATFLKELHS 143 (320)
T ss_dssp CCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccc-----ccCCHHHHHHHHHHHHHHHHHHhC
Confidence 32221 126777889999999999999994
No 427
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=88.86 E-value=0.21 Score=31.49 Aligned_cols=27 Identities=7% Similarity=0.116 Sum_probs=11.4
Q ss_pred eEeehHH-HHHHHHHHHHHhhhhhcccc
Q 007553 422 LVTIILP-MVAFLALIFGILFVHRRMDE 448 (599)
Q Consensus 422 ~~~~~~~-~~~~~~~~~~~~~~~rr~~~ 448 (599)
+++++++ +++++++++.++++.||++.
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 3344443 33333344444444444443
No 428
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=88.37 E-value=0.19 Score=31.64 Aligned_cols=28 Identities=7% Similarity=0.207 Sum_probs=12.4
Q ss_pred ceEeehHHHHHHHHHHHHHhhhhhcccc
Q 007553 421 PLVTIILPMVAFLALIFGILFVHRRMDE 448 (599)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 448 (599)
.++++++++++++.+.+++.+|.||++.
T Consensus 13 ~Ia~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 13 SIISAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred chHHHHHHHHHHHHHHHHHHhheehhhh
Confidence 3444455544333344444444444443
No 429
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=85.07 E-value=1.9 Score=41.08 Aligned_cols=89 Identities=7% Similarity=-0.136 Sum_probs=58.2
Q ss_pred ceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cccc------cC------CCCCCcceeecccccc-
Q 007553 489 YCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DFRH------YN------SHTDNDDSSDEHLANN- 553 (599)
Q Consensus 489 ~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l~H------~n------~~~~~~~lv~e~~~~G- 553 (599)
..++.|....||+. |..++||.-.. ......+..|..+ .+.+ |. ...+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 44677888889977 55677777432 2223456677776 4433 22 1233467999999877
Q ss_pred -cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhC
Q 007553 554 -EHFLSAPENYERVDFSPDFSIADQSKKGFKLLAD 587 (599)
Q Consensus 554 -~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~ 587 (599)
.+..- ..++..++..++.++++.|+-||.
T Consensus 100 l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~ 129 (306)
T 3tdw_A 100 LGEDGM-----AVLPDDAKDRLALQLAEFMNELSA 129 (306)
T ss_dssp CHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred Cchhhh-----hhCCHHHHHHHHHHHHHHHHHHhc
Confidence 32111 125677889999999999999995
No 430
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=85.03 E-value=1.3 Score=44.24 Aligned_cols=65 Identities=18% Similarity=0.055 Sum_probs=39.6
Q ss_pred ceecccCCceEEEEEeC-CCCEEEEEEecCCch--------hhHHHHHHhhc--ccc------ccC---CCCCCcceeec
Q 007553 489 YCIGTGGYGSVYRAQLS-SGRVVALKKLHRSET--------EELAFLETSST--DFR------HYN---SHTDNDDSSDE 548 (599)
Q Consensus 489 ~~lg~g~~g~v~~~~~~-~g~~vavK~l~~~~~--------~~~~f~~e~~~--~l~------H~n---~~~~~~~lv~e 548 (599)
..+|.|.++.||++... ++..++||....... ....+..|.++ .+. -|. .+.+..++|||
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~~~~~lvmE 115 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVME 115 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEEC
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcCCccEEEEE
Confidence 46899999999999754 468899997643211 11234445554 221 222 34556789999
Q ss_pred ccccc
Q 007553 549 HLANN 553 (599)
Q Consensus 549 ~~~~G 553 (599)
|+++.
T Consensus 116 ~l~g~ 120 (397)
T 2olc_A 116 DLSHL 120 (397)
T ss_dssp CCTTS
T ss_pred eCCCc
Confidence 99865
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=82.09 E-value=1.1 Score=42.27 Aligned_cols=69 Identities=14% Similarity=0.064 Sum_probs=46.4
Q ss_pred ccccceecccCCceEEEEEeCCCCEEEEEEecCCchh-hHHHHHHhhc--c------ccccC-CCCCCcceeecccccc
Q 007553 485 FHIKYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETE-ELAFLETSST--D------FRHYN-SHTDNDDSSDEHLANN 553 (599)
Q Consensus 485 ~~~~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~-~~~f~~e~~~--~------l~H~n-~~~~~~~lv~e~~~~G 553 (599)
+.....+|.|..+.||+.++.||+.|.||+-...... ...|..|.+. . ...|. ...+.-++||||++.+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~~~lv~e~l~~~ 95 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccCceEEEEeeccc
Confidence 4444568999999999999999999999986543222 2345666654 2 22333 2234457899999876
No 432
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=76.67 E-value=5.5 Score=30.54 Aligned_cols=48 Identities=8% Similarity=-0.047 Sum_probs=31.6
Q ss_pred CcccccccccccCCCCCcEEeeCCCCCCeecCCcccCCCCCCCEEEcccC
Q 007553 5 GNAAELSQLNFTCFPNLVTFRIWGTRFLSGRIPSETGALSRLKVLDLSYN 54 (599)
Q Consensus 5 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n 54 (599)
..+++|...+|.+|.+|+.+.+-. .++.--...|.+|.+|+.+.+.+.
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~--~v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQP--NIGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECT--TSSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCC--chheEcHHHHhccCCccEEEEcCC
Confidence 356777777777777777777763 444333445667777777777554
No 433
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=72.98 E-value=7 Score=37.29 Aligned_cols=82 Identities=13% Similarity=-0.022 Sum_probs=54.1
Q ss_pred cceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc--cc------cccC-----CCCCCcceeecccccc-
Q 007553 488 KYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST--DF------RHYN-----SHTDNDDSSDEHLANN- 553 (599)
Q Consensus 488 ~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~--~l------~H~n-----~~~~~~~lv~e~~~~G- 553 (599)
...++.|.+..+|+... ++..++||+-.... ...|..|.+. .+ .-|. ...+..++||||++++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~--~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERSY--RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGGG--HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCccc--HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 34588999999999886 46788888775432 3345566554 22 2333 2335578999999876
Q ss_pred cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCC
Q 007553 554 EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADR 588 (599)
Q Consensus 554 ~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~ 588 (599)
-. - ..+.+++++|+-||..
T Consensus 118 ~~------------~----~~~~~lG~~LA~LH~~ 136 (312)
T 3jr1_A 118 NK------------Q----SSFTIFAEKIAQLHQI 136 (312)
T ss_dssp CC------------T----THHHHHHHHHHHHHHC
T ss_pred CC------------c----hhHHHHHHHHHHHHcC
Confidence 21 0 2456888999999954
No 434
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=72.06 E-value=9.5 Score=37.24 Aligned_cols=87 Identities=7% Similarity=0.012 Sum_probs=57.6
Q ss_pred cceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc-------cccccC------CCCCCcceeecccccc-
Q 007553 488 KYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST-------DFRHYN------SHTDNDDSSDEHLANN- 553 (599)
Q Consensus 488 ~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~-------~l~H~n------~~~~~~~lv~e~~~~G- 553 (599)
...++.|....+|+... +|..+++|.-.... .+..|..+ .+..|. ......++||||+++.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~~----~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCAD----GFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCCH----HHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCchh----hHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 34578888999999886 57888888775432 34445444 233444 1224578999999965
Q ss_pred cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCC
Q 007553 554 EHFLSAPENYERVDFSPDFSIADQSKKGFKLLADR 588 (599)
Q Consensus 554 ~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~ 588 (599)
-.- ++..++..++.++++.|+-||..
T Consensus 121 l~~---------l~~~~~~~~~~~lg~~La~LH~~ 146 (362)
T 3ovc_A 121 LQD---------LPETELPAVLQPVAEAMDAIAAA 146 (362)
T ss_dssp TTT---------SCGGGSGGGHHHHHHHHHHHHHC
T ss_pred ccc---------CCHHHHHHHHHHHHHHHHHHhcC
Confidence 221 23344566788999999999953
No 435
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=65.94 E-value=15 Score=27.99 Aligned_cols=46 Identities=20% Similarity=0.125 Sum_probs=25.0
Q ss_pred cCcccCCcCCCCCCCCCEEeccCCcccccCCccCCCCCCCcEEEeec
Q 007553 55 RLTGTIPSEIGSLRDLLELNLSYNILNGSIPLEFGNLKDLYDLRLQG 101 (599)
Q Consensus 55 ~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 101 (599)
.++.+-..+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+.+
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344344455666666666666554 2224445566666666666654
No 436
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=58.94 E-value=21 Score=32.67 Aligned_cols=88 Identities=14% Similarity=0.010 Sum_probs=54.9
Q ss_pred ecccCCc-eEEEEEeC-CCCEEEEEEecCCchhhHHHHHHhhc------cccccC-----CCCCCcceeecccccc--cc
Q 007553 491 IGTGGYG-SVYRAQLS-SGRVVALKKLHRSETEELAFLETSST------DFRHYN-----SHTDNDDSSDEHLANN--EH 555 (599)
Q Consensus 491 lg~g~~g-~v~~~~~~-~g~~vavK~l~~~~~~~~~f~~e~~~------~l~H~n-----~~~~~~~lv~e~~~~G--~~ 555 (599)
+..|..+ .||+.... ++..+.||+-.... ..++.+|... .+--|. ...+..++||||+++. .+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~--~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGSV--ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETHH--HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCCC--HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence 4455555 68987654 46678888765432 3345566654 222222 2456678999999977 33
Q ss_pred cccCCCCCCCCChHHHHHHHHHHHHHHhhhhC
Q 007553 556 FLSAPENYERVDFSPDFSIADQSKKGFKLLAD 587 (599)
Q Consensus 556 ~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~ 587 (599)
... .+......++.++++.|+-||.
T Consensus 110 ~~~-------~~~~~~~~~~~~l~~~L~~Lh~ 134 (272)
T 4gkh_A 110 VLE-------EYPDSGENIVDALAVFLRRLHS 134 (272)
T ss_dssp HHH-------HCGGGHHHHHHHHHHHHHHHHT
T ss_pred ccc-------CCHHHHHHHHHHHHHHHHHhcC
Confidence 222 1223456788899999999994
No 437
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=58.04 E-value=34 Score=32.88 Aligned_cols=99 Identities=5% Similarity=-0.066 Sum_probs=57.9
Q ss_pred cee-cccCCceEEEEEeC-------CCCEEEEEEecCCc---h-hhHHHHHHhhc--c------ccccC-----CCC---
Q 007553 489 YCI-GTGGYGSVYRAQLS-------SGRVVALKKLHRSE---T-EELAFLETSST--D------FRHYN-----SHT--- 540 (599)
Q Consensus 489 ~~l-g~g~~g~v~~~~~~-------~g~~vavK~l~~~~---~-~~~~f~~e~~~--~------l~H~n-----~~~--- 540 (599)
..+ +.|....+|+.... ++..+++|.-.... . ....+..|..+ . +.-|. ...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 446 77888899987764 26678888764422 0 01223344433 1 22333 111
Q ss_pred CCcceeecccccc--cccccC---CCCCCCCChHHHHHHHHHHHHHHhhhhC
Q 007553 541 DNDDSSDEHLANN--EHFLSA---PENYERVDFSPDFSIADQSKKGFKLLAD 587 (599)
Q Consensus 541 ~~~~lv~e~~~~G--~~~l~~---~~~~~~l~~~~~~~ia~~ia~gl~yLH~ 587 (599)
...++||||+++. .+.+.. ...-..++..++..++.++++.|+=||.
T Consensus 106 g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~ 157 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHS 157 (357)
T ss_dssp SSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 2457999999876 432210 0000125666778899999999999995
No 438
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=52.95 E-value=1.1 Score=26.60 Aligned_cols=25 Identities=16% Similarity=0.408 Sum_probs=9.6
Q ss_pred eEeehHHHHHHHHHHHHHhhhhhcc
Q 007553 422 LVTIILPMVAFLALIFGILFVHRRM 446 (599)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~rr~ 446 (599)
+++++++.++++.+..+..++.||+
T Consensus 10 IaagVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 10 IIATVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHC
T ss_pred eHHHHHHHHHHHHHHHHhheEEeec
Confidence 3344444333333333334444443
No 439
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=52.65 E-value=32 Score=32.73 Aligned_cols=83 Identities=17% Similarity=0.131 Sum_probs=43.2
Q ss_pred eecccCCceEEEEEeCCCCEEEEEEecCCchhhH---HHHHHhhc-cccccC-C----------CCCCcceeecccccc-
Q 007553 490 CIGTGGYGSVYRAQLSSGRVVALKKLHRSETEEL---AFLETSST-DFRHYN-S----------HTDNDDSSDEHLANN- 553 (599)
Q Consensus 490 ~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~---~f~~e~~~-~l~H~n-~----------~~~~~~lv~e~~~~G- 553 (599)
.++.|..+.||+....+| .+++|+......... +..+.+.- .+..|. . ..+..++||||++|.
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~G~~ 117 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRP 117 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSCHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCCCBC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCCHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeecCcc
Confidence 355567889999887655 488998876322111 11111111 333344 1 123457889999865
Q ss_pred cccccCCCCCCCCChHHHHHHHHHHHHHHhhhh
Q 007553 554 EHFLSAPENYERVDFSPDFSIADQSKKGFKLLA 586 (599)
Q Consensus 554 ~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH 586 (599)
-.. .+ ...+.++++.|+-||
T Consensus 118 ~~~---------~~----~~~~~~~g~~La~lH 137 (346)
T 2q83_A 118 FEL---------TV----KQDLEFIMKGLADFH 137 (346)
T ss_dssp CCT---------TS----HHHHHHHHHHHHHHH
T ss_pred CCC---------CC----HHHHHHHHHHHHHHH
Confidence 321 01 123567777777777
No 440
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=50.74 E-value=61 Score=30.52 Aligned_cols=44 Identities=16% Similarity=0.098 Sum_probs=29.2
Q ss_pred ccHHHHHHHhhhccc-----cceecccCCceEEEEEeCCCCEEEEEEecC
Q 007553 473 ITFEEMIQATEDFHI-----KYCIGTGGYGSVYRAQLSSGRVVALKKLHR 517 (599)
Q Consensus 473 ~~~~~l~~at~~~~~-----~~~lg~g~~g~v~~~~~~~g~~vavK~l~~ 517 (599)
++.+++..+...+.. ...++ |....||+....+|+.+++|....
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~ 59 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRP 59 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECT
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCC
Confidence 455666555554432 12355 777899988877787899999864
No 441
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=40.47 E-value=75 Score=31.35 Aligned_cols=90 Identities=16% Similarity=0.029 Sum_probs=50.6
Q ss_pred ceecccCCceEEEEEeCCCCEEEEEEecC-------C-c--hhhHHHHHHhhc---c---ccccC---CCCCCcceeecc
Q 007553 489 YCIGTGGYGSVYRAQLSSGRVVALKKLHR-------S-E--TEELAFLETSST---D---FRHYN---SHTDNDDSSDEH 549 (599)
Q Consensus 489 ~~lg~g~~g~v~~~~~~~g~~vavK~l~~-------~-~--~~~~~f~~e~~~---~---l~H~n---~~~~~~~lv~e~ 549 (599)
..+|.|....||+... ++..++||.... . . .....+..|+.. . ..-|. ...+..++||||
T Consensus 40 ~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~~~~~~lv~e~ 118 (420)
T 2pyw_A 40 KEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRY 118 (420)
T ss_dssp EECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEETTTTEEEECC
T ss_pred EEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEECCCccEEEEee
Confidence 4588899999999875 577899994321 1 0 012233334332 1 12233 345667899999
Q ss_pred c-ccc---cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhC
Q 007553 550 L-ANN---EHFLSAPENYERVDFSPDFSIADQSKKGFKLLAD 587 (599)
Q Consensus 550 ~-~~G---~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~ 587 (599)
+ +++ ++.+.... ... ..+.++++.|+-+|.
T Consensus 119 l~~g~~~l~~~l~~~~-----~~~---~~~~~lg~~La~lH~ 152 (420)
T 2pyw_A 119 LEPPHIILRKGLIAGI-----EYP---FLADHMSDYMAKTLF 152 (420)
T ss_dssp CCTTCEEHHHHHHHTC-----CCT---THHHHHHHHHHHHHH
T ss_pred cCCcchhHHHHHhcCC-----CCH---HHHHHHHHHHHHHHH
Confidence 9 764 22222111 111 246677777777883
No 442
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=33.74 E-value=88 Score=29.03 Aligned_cols=84 Identities=11% Similarity=0.022 Sum_probs=45.9
Q ss_pred cceecccCCceEEEEEeCCCCEEEEEEecCCchhhHHHHHHhhc-------cccccC---CCCCCcceeecccccccccc
Q 007553 488 KYCIGTGGYGSVYRAQLSSGRVVALKKLHRSETEELAFLETSST-------DFRHYN---SHTDNDDSSDEHLANNEHFL 557 (599)
Q Consensus 488 ~~~lg~g~~g~v~~~~~~~g~~vavK~l~~~~~~~~~f~~e~~~-------~l~H~n---~~~~~~~lv~e~~~~G~~~l 557 (599)
...++.|....+|+. ..+++|+-............|..+ .+. |. ...+.-++|+||++.|..
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~-P~~~~~~~~~~~~v~e~i~~g~~-- 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVS-PEVLHVDPATGVMVTRYIAGAQT-- 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSS-CCEEEECTTTCCEEEECCTTCEE--
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCC-CceEEEECCCCEEEEeecCCCcc--
Confidence 345788888999988 447777665421110011123332 233 44 344446788999865611
Q ss_pred cCCCCCCCCChHHH---HHHHHHHHHHHhhhhC
Q 007553 558 SAPENYERVDFSPD---FSIADQSKKGFKLLAD 587 (599)
Q Consensus 558 ~~~~~~~~l~~~~~---~~ia~~ia~gl~yLH~ 587 (599)
++.... -.++.++++.|+-||+
T Consensus 95 --------l~~~~~~~~~~~~~~~~~~La~lH~ 119 (301)
T 3dxq_A 95 --------MSPEKFKTRPGSPARAGEAFRKLHG 119 (301)
T ss_dssp --------CCHHHHHHSTTHHHHHHHHHHHHHT
T ss_pred --------CCHhhHhhhHHHHHHHHHHHHHHhC
Confidence 111111 2367788888888885
No 443
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=32.89 E-value=6 Score=40.18 Aligned_cols=42 Identities=7% Similarity=0.020 Sum_probs=8.1
Q ss_pred CceEEEEEeCC-CCEEEE------EEecCCchh---hHHHHHHhhc--cccccC
Q 007553 496 YGSVYRAQLSS-GRVVAL------KKLHRSETE---ELAFLETSST--DFRHYN 537 (599)
Q Consensus 496 ~g~v~~~~~~~-g~~vav------K~l~~~~~~---~~~f~~e~~~--~l~H~n 537 (599)
||+||+|.+.. ..+||| |+....... ...|.+|..+ ..+|||
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~n 205 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPK 205 (463)
T ss_dssp BCCC---------CCBGGGC----------------------------------
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccc
Confidence 99999999853 468888 776543221 3468888777 789998
No 444
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=27.72 E-value=57 Score=28.86 Aligned_cols=66 Identities=6% Similarity=-0.158 Sum_probs=45.0
Q ss_pred Hhhc-cccccC-------CCCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhC----------
Q 007553 528 TSST-DFRHYN-------SHTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFKLLAD---------- 587 (599)
Q Consensus 528 e~~~-~l~H~n-------~~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~---------- 587 (599)
|+.+ .-.||+ ...+.+.+.|+--+++ ...++. .+-..++++|..|++--.+++.
T Consensus 36 el~LL~~~~~~Fl~~~I~e~eD~v~~~y~~~~~~~~f~~ik~------~~~~eKlr~l~ni~~l~~~~~~r~tf~L~P~N 109 (215)
T 4ann_A 36 LMYLLEQHSPYFIDAELTELRDSFQIHYDINDNHTPFDNIKS------FTKNEKLRYLLNIKNLEEVNRTRYTFVLAPDE 109 (215)
T ss_dssp GGGGGGSCCTTBCCEEEEECSSEEEEEECCCTTSEEGGGGGG------SCHHHHHHHHHHGGGGGGGGGSSEECCCSGGG
T ss_pred HHHHHhccCCcccceEEEEcccEEEEEEEcCcccCCHHHHHh------cCHHHHHHHHHHHHHHHHHhcCceEEEEecce
Confidence 4444 667776 3445555556655555 333442 6778999999999999988872
Q ss_pred -----CCCccccccccC
Q 007553 588 -----RKYRKSYYQRLY 599 (599)
Q Consensus 588 -----~~~~~i~Hrdl~ 599 (599)
+..|.|+||+++
T Consensus 110 L~f~~~~~p~i~~RGik 126 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQ 126 (215)
T ss_dssp EEECTTSCEEESCCEET
T ss_pred EEEcCCCCEEEEEccCc
Confidence 345899999873
No 445
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=26.91 E-value=2e+02 Score=27.20 Aligned_cols=85 Identities=9% Similarity=-0.024 Sum_probs=47.7
Q ss_pred ccCCceEEEEEeCCCCEEEEEEecCCchh-hHHHHHHhhc-ccc-ccC----C-------CCCCcceeeccccccccccc
Q 007553 493 TGGYGSVYRAQLSSGRVVALKKLHRSETE-ELAFLETSST-DFR-HYN----S-------HTDNDDSSDEHLANNEHFLS 558 (599)
Q Consensus 493 ~g~~g~v~~~~~~~g~~vavK~l~~~~~~-~~~f~~e~~~-~l~-H~n----~-------~~~~~~lv~e~~~~G~~~l~ 558 (599)
.|....||+....+| .+++|+....... +.++.+.+.- .+. -|. . ..+..++||||++|..- .
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~~~--~ 109 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYHDEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNG--F 109 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSSCCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCCBT--T
T ss_pred CccccceEEEEeCCC-CEEEEEecCccchHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCCcC--c
Confidence 333679999987777 8899987654321 2233333322 233 233 1 12345789999986511 1
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHhhhhCC
Q 007553 559 APENYERVDFSPDFSIADQSKKGFKLLADR 588 (599)
Q Consensus 559 ~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~ 588 (599)
. ...+.. .+.++++.|+-||..
T Consensus 110 ~----~~~~~~----~~~~lg~~La~LH~~ 131 (339)
T 3i1a_A 110 T----QNLTGK----QWKQLGKVLRQIHET 131 (339)
T ss_dssp T----SCCCHH----HHHHHHHHHHHHHTC
T ss_pred c----cCCCHH----HHHHHHHHHHHHhCc
Confidence 0 012322 345788888889954
No 446
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=25.54 E-value=1.1e+02 Score=30.30 Aligned_cols=89 Identities=16% Similarity=0.142 Sum_probs=48.9
Q ss_pred ceecccCCceEEEEEeCC--------CCEEEEEEecCCchhhHHHHHHhhc--cccccCCCCC-----Ccceeecccccc
Q 007553 489 YCIGTGGYGSVYRAQLSS--------GRVVALKKLHRSETEELAFLETSST--DFRHYNSHTD-----NDDSSDEHLANN 553 (599)
Q Consensus 489 ~~lg~g~~g~v~~~~~~~--------g~~vavK~l~~~~~~~~~f~~e~~~--~l~H~n~~~~-----~~~lv~e~~~~G 553 (599)
..++.|....+|+....+ +..+++|+...... ...+.+|..+ .+...+.... .-.+|+||+++-
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~li~E~~~l~~L~~~g~~P~l~~~~~~g~v~e~l~G~ 157 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET-ESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSR 157 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC-HHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCCCEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc-HHHHHHHHHHHHHHHhCCCCCcEEEEeCCCEEEEEeCCc
Confidence 346778888999998753 47888888743211 1334456655 2222221000 112677777632
Q ss_pred cccccCCCCCCCCChHHHHHHHHHHHHHHhhhhC
Q 007553 554 EHFLSAPENYERVDFSPDFSIADQSKKGFKLLAD 587 (599)
Q Consensus 554 ~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~ 587 (599)
. +.. ..+ ..-.++.+||+.|+-||.
T Consensus 158 ~--l~~----~~l---~~~~~~~~ia~~La~LH~ 182 (429)
T 1nw1_A 158 P--LSC----HEI---SLAHMSTKIAKRVAKVHQ 182 (429)
T ss_dssp E--CCT----TGG---GSHHHHHHHHHHHHHHTT
T ss_pred c--cCh----hhc---CCHHHHHHHHHHHHHHhC
Confidence 1 000 001 112467889999999995
No 447
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=25.29 E-value=2.4e+02 Score=26.13 Aligned_cols=44 Identities=16% Similarity=0.173 Sum_probs=26.7
Q ss_pred ccHHHHHHHhhhccc-----cceecccCCceEEEEEeCCCCEEEEEEecC
Q 007553 473 ITFEEMIQATEDFHI-----KYCIGTGGYGSVYRAQLSSGRVVALKKLHR 517 (599)
Q Consensus 473 ~~~~~l~~at~~~~~-----~~~lg~g~~g~v~~~~~~~g~~vavK~l~~ 517 (599)
++.+++......|.. ...++.|....+|+....+| .+++|....
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~ 55 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEK 55 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCC
Confidence 556666665555543 23355677789999887666 577888765
No 448
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=24.37 E-value=1e+02 Score=30.01 Aligned_cols=88 Identities=9% Similarity=0.061 Sum_probs=43.8
Q ss_pred eecccCCceEEEEEeCC--------CCEEEEEEecCCchhhHHHHHHhhc--ccc----ccC---CCCCCcceeeccccc
Q 007553 490 CIGTGGYGSVYRAQLSS--------GRVVALKKLHRSETEELAFLETSST--DFR----HYN---SHTDNDDSSDEHLAN 552 (599)
Q Consensus 490 ~lg~g~~g~v~~~~~~~--------g~~vavK~l~~~~~~~~~f~~e~~~--~l~----H~n---~~~~~~~lv~e~~~~ 552 (599)
.+..|....+|+....+ +..+++|+-...........+|..+ .+. -|. ...+ .+|+||+++
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~--g~v~e~i~G 134 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE--GRLEQYIPS 134 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT--EEEEECCSE
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC--ccEEEEecC
Confidence 35567778899988742 4678888763321122334456554 221 133 1111 278888885
Q ss_pred ccccccCCCCCCCCChHHHHHHHHHHHHHHhhhhCC
Q 007553 553 NEHFLSAPENYERVDFSPDFSIADQSKKGFKLLADR 588 (599)
Q Consensus 553 G~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~~ 588 (599)
.. +... .+ . .-.+..+||+.|+=||+.
T Consensus 135 ~~--l~~~----~l--~-~p~~~~~ia~~La~LH~~ 161 (379)
T 3feg_A 135 RP--LKTQ----EL--R-EPVLSAAIATKMAQFHGM 161 (379)
T ss_dssp EE--CCGG----GG--G-CHHHHHHHHHHHHHHHTC
T ss_pred cc--CChh----Hh--C-CHHHHHHHHHHHHHHhCC
Confidence 40 1100 01 0 134677899999999953
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=23.76 E-value=42 Score=29.84 Aligned_cols=56 Identities=7% Similarity=-0.175 Sum_probs=38.9
Q ss_pred CCCCCcceeecccccc--cccccCCCCCCCCChHHHHHHHHHHHHHHh-hhh---------------CCCCccccccccC
Q 007553 538 SHTDNDDSSDEHLANN--EHFLSAPENYERVDFSPDFSIADQSKKGFK-LLA---------------DRKYRKSYYQRLY 599 (599)
Q Consensus 538 ~~~~~~~lv~e~~~~G--~~~l~~~~~~~~l~~~~~~~ia~~ia~gl~-yLH---------------~~~~~~i~Hrdl~ 599 (599)
..++.+.+.|+--+++ ...++ ..+...++++|..|+.-.. +++ .+..|.|+||+++
T Consensus 58 ~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~r~tf~l~P~NL~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 58 VSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSARRLIFIVCPENLMFNRALEPFFLHVGVK 131 (219)
T ss_dssp ECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSSSEECCCCGGGEEECTTCCEEESCCEET
T ss_pred EeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhCceeEEEeCceEEEeCCCcEEEEEcCCc
Confidence 3445555555555555 33343 2678899999999999999 554 3567899999974
No 450
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=20.02 E-value=1.2e+02 Score=29.97 Aligned_cols=89 Identities=9% Similarity=0.010 Sum_probs=46.5
Q ss_pred eecccCCceEEEEEeCC--------CCEEEEEEecCCchhhHHHHHHhhc--ccc----ccC-CCCCCcceeeccccccc
Q 007553 490 CIGTGGYGSVYRAQLSS--------GRVVALKKLHRSETEELAFLETSST--DFR----HYN-SHTDNDDSSDEHLANNE 554 (599)
Q Consensus 490 ~lg~g~~g~v~~~~~~~--------g~~vavK~l~~~~~~~~~f~~e~~~--~l~----H~n-~~~~~~~lv~e~~~~G~ 554 (599)
.+..|-...+|+....+ +..+++|+-.......-.-.+|..+ .+. -|. .....-++|+||+++..
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~~~~I~efI~G~~ 156 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFPEGRIEEFIDGEP 156 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEETTEEEEECCCSEE
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcCCCEEEEEeCCcc
Confidence 45667788999988753 5778888764432110011123332 111 222 11122357777777540
Q ss_pred ccccCCCCCCCCChHHHHHHHHHHHHHHhhhhC
Q 007553 555 HFLSAPENYERVDFSPDFSIADQSKKGFKLLAD 587 (599)
Q Consensus 555 ~~l~~~~~~~~l~~~~~~~ia~~ia~gl~yLH~ 587 (599)
+.. ..+ ..-.++.+||+.|+-||+
T Consensus 157 --l~~----~~l---~~~~~~~~ia~~La~LH~ 180 (424)
T 3mes_A 157 --LTT----KQL---QLTHICVEVAKNMGSLHI 180 (424)
T ss_dssp --CCT----GGG---GSHHHHHHHHHHHHHHHT
T ss_pred --CCh----hhc---CCHHHHHHHHHHHHHHhc
Confidence 000 001 112478899999999994
Done!