Query 007555
Match_columns 598
No_of_seqs 215 out of 702
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 12:12:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007555.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007555hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06963 FPN1: Ferroportin1 (F 100.0 8.2E-74 1.8E-78 620.0 41.7 419 147-570 2-432 (432)
2 KOG2601 Iron transporter [Inor 100.0 6.9E-54 1.5E-58 441.6 20.0 431 145-597 25-486 (503)
3 PF05977 MFS_3: Transmembrane 100.0 3.7E-42 8.1E-47 383.4 42.5 391 142-583 5-397 (524)
4 PRK11195 lysophospholipid tran 100.0 9.9E-26 2.1E-30 242.8 43.1 381 146-584 2-385 (393)
5 PRK06814 acylglycerophosphoeth 99.9 2.9E-24 6.4E-29 260.0 39.7 362 145-553 9-394 (1140)
6 PRK10489 enterobactin exporter 99.9 3.4E-23 7.5E-28 223.5 37.9 380 145-577 15-396 (417)
7 TIGR00900 2A0121 H+ Antiporter 99.9 1E-20 2.2E-25 197.0 39.3 358 149-553 1-361 (365)
8 PRK08633 2-acyl-glycerophospho 99.9 7.9E-19 1.7E-23 212.2 40.8 357 145-549 7-377 (1146)
9 PRK05122 major facilitator sup 99.8 4E-17 8.8E-22 174.7 39.9 353 142-555 10-364 (399)
10 PRK11646 multidrug resistance 99.8 1E-16 2.2E-21 173.3 39.0 345 150-556 13-360 (400)
11 PRK15402 multidrug efflux syst 99.8 7.1E-16 1.5E-20 165.9 43.7 359 152-564 18-379 (406)
12 PRK09874 drug efflux system pr 99.8 3.7E-16 8E-21 166.9 40.4 352 145-557 12-375 (408)
13 PF07690 MFS_1: Major Facilita 99.8 1E-17 2.2E-22 173.8 27.5 345 152-543 1-348 (352)
14 PRK11652 emrD multidrug resist 99.8 2.1E-15 4.5E-20 161.4 42.4 352 144-553 2-358 (394)
15 PRK12307 putative sialic acid 99.8 5E-16 1.1E-20 167.6 37.7 366 145-557 16-385 (426)
16 TIGR00897 2A0118 polyol permea 99.8 1.9E-15 4.1E-20 163.0 41.3 373 145-566 11-387 (402)
17 TIGR00901 2A0125 AmpG-related 99.8 1E-15 2.2E-20 161.4 35.1 329 164-540 5-355 (356)
18 PRK12382 putative transporter; 99.8 4.1E-15 8.8E-20 159.0 38.7 351 145-556 13-365 (392)
19 PRK10213 nepI ribonucleoside t 99.8 1.8E-14 3.9E-19 155.4 43.5 334 175-573 47-384 (394)
20 PRK03545 putative arabinose tr 99.8 2.1E-14 4.6E-19 153.8 43.4 344 162-569 24-369 (390)
21 PRK11902 ampG muropeptide tran 99.8 1E-14 2.2E-19 157.2 41.0 385 149-597 4-399 (402)
22 PRK11102 bicyclomycin/multidru 99.8 1.8E-14 3.9E-19 152.5 41.7 331 159-542 3-334 (377)
23 TIGR00891 2A0112 putative sial 99.8 3.8E-15 8.3E-20 157.8 34.7 375 144-557 9-392 (405)
24 PRK11551 putative 3-hydroxyphe 99.7 1.9E-14 4.2E-19 154.2 40.2 379 148-580 16-395 (406)
25 TIGR00710 efflux_Bcr_CflA drug 99.7 7.8E-14 1.7E-18 147.2 43.0 345 152-550 10-356 (385)
26 TIGR00893 2A0114 d-galactonate 99.7 8.4E-15 1.8E-19 153.0 35.0 372 159-564 6-382 (399)
27 PRK10054 putative transporter; 99.7 2.4E-14 5.3E-19 154.5 37.4 367 145-571 5-375 (395)
28 PRK11043 putative transporter; 99.7 3.7E-13 7.9E-18 144.4 44.8 349 149-555 5-357 (401)
29 cd06174 MFS The Major Facilita 99.7 5.8E-14 1.3E-18 144.6 35.0 338 150-570 2-342 (352)
30 PRK11128 putative 3-phenylprop 99.7 1.1E-13 2.3E-18 148.3 37.4 348 149-558 9-358 (382)
31 TIGR00899 2A0120 sugar efflux 99.7 2.6E-13 5.5E-18 143.0 38.5 343 153-555 3-349 (375)
32 PRK03893 putative sialic acid 99.7 1E-13 2.2E-18 152.8 36.5 368 145-557 18-430 (496)
33 PRK10473 multidrug efflux syst 99.7 1E-12 2.3E-17 140.5 42.1 272 147-468 3-275 (392)
34 PRK10091 MFS transport protein 99.7 5.2E-13 1.1E-17 142.9 39.6 371 146-580 2-375 (382)
35 PRK11663 regulatory protein Uh 99.7 4.4E-13 9.5E-18 146.3 39.1 375 145-557 21-401 (434)
36 PRK15403 multidrug efflux syst 99.7 1.2E-12 2.5E-17 142.4 42.0 348 152-555 21-373 (413)
37 TIGR00881 2A0104 phosphoglycer 99.7 2.8E-14 6.1E-19 149.1 28.4 367 154-554 2-371 (379)
38 PRK09528 lacY galactoside perm 99.7 1.5E-13 3.2E-18 148.8 34.7 365 145-556 8-379 (420)
39 PRK14995 methyl viologen resis 99.7 7.8E-13 1.7E-17 147.0 39.1 368 148-552 7-410 (495)
40 PRK15011 sugar efflux transpor 99.7 2.3E-12 4.9E-17 138.7 41.3 346 148-555 16-366 (393)
41 PRK11273 glpT sn-glycerol-3-ph 99.7 1.1E-12 2.3E-17 144.1 38.9 374 150-557 28-412 (452)
42 PRK10504 putative transporter; 99.6 3.3E-12 7.1E-17 140.1 40.9 371 146-552 9-412 (471)
43 TIGR00892 2A0113 monocarboxyla 99.6 6.8E-13 1.5E-17 146.1 34.6 369 150-556 18-396 (455)
44 TIGR00711 efflux_EmrB drug res 99.6 1.5E-12 3.3E-17 142.5 36.4 370 148-554 3-409 (485)
45 TIGR00895 2A0115 benzoate tran 99.6 7.1E-13 1.5E-17 139.6 31.7 354 150-543 20-387 (398)
46 TIGR00890 2A0111 Oxalate/Forma 99.6 4.8E-12 1E-16 132.1 35.9 333 167-555 23-357 (377)
47 PRK03633 putative MFS family t 99.6 9.1E-12 2E-16 133.2 38.2 344 145-556 4-348 (381)
48 PRK11010 ampG muropeptide tran 99.6 6.4E-11 1.4E-15 131.9 45.4 359 145-555 10-378 (491)
49 TIGR00902 2A0127 phenyl propri 99.6 2.1E-11 4.5E-16 130.7 39.7 351 148-558 5-358 (382)
50 TIGR00792 gph sugar (Glycoside 99.6 3.8E-11 8.3E-16 129.8 39.6 352 155-552 7-377 (437)
51 PRK09556 uhpT sugar phosphate 99.6 6.7E-12 1.5E-16 138.3 34.1 392 128-554 11-411 (467)
52 PRK09705 cynX putative cyanate 99.5 2.3E-11 5.1E-16 131.0 35.7 354 165-584 27-384 (393)
53 TIGR00882 2A0105 oligosacchari 99.5 4.2E-11 9.1E-16 128.6 36.9 363 146-556 1-371 (396)
54 TIGR00879 SP MFS transporter, 99.5 1.4E-11 2.9E-16 132.6 30.8 375 155-555 36-445 (481)
55 TIGR02718 sider_RhtX_FptX side 99.5 5.7E-10 1.2E-14 119.6 42.7 352 153-554 7-365 (390)
56 TIGR00886 2A0108 nitrite extru 99.5 3.3E-11 7.2E-16 126.7 32.0 348 147-540 1-363 (366)
57 TIGR00712 glpT glycerol-3-phos 99.5 9.7E-11 2.1E-15 127.9 36.2 357 166-556 46-409 (438)
58 TIGR00883 2A0106 metabolite-pr 99.5 4.3E-11 9.2E-16 125.7 31.9 137 416-557 238-377 (394)
59 TIGR00889 2A0110 nucleoside tr 99.5 1.1E-10 2.3E-15 127.4 35.4 343 164-557 19-373 (418)
60 PRK10429 melibiose:sodium symp 99.5 2.9E-10 6.3E-15 125.8 38.3 349 154-543 13-380 (473)
61 COG2814 AraJ Arabinose efflux 99.5 1.7E-09 3.7E-14 116.5 40.6 357 149-573 11-378 (394)
62 PRK03699 putative transporter; 99.4 1.3E-09 2.9E-14 117.1 38.3 267 147-467 7-276 (394)
63 PRK09848 glucuronide transport 99.4 1.6E-09 3.5E-14 118.5 39.5 342 154-543 15-375 (448)
64 PRK10133 L-fucose transporter; 99.4 2.3E-09 5E-14 117.7 40.7 354 149-556 28-408 (438)
65 TIGR00903 2A0129 major facilit 99.4 4.1E-09 8.8E-14 113.3 38.2 356 159-576 3-361 (368)
66 TIGR00924 yjdL_sub1_fam amino 99.4 3.2E-09 7E-14 117.9 37.9 161 145-323 8-172 (475)
67 TIGR00894 2A0114euk Na(+)-depe 99.4 8E-10 1.7E-14 121.3 32.7 252 178-460 71-325 (465)
68 PF11700 ATG22: Vacuole efflux 99.4 5.2E-09 1.1E-13 116.4 39.1 196 379-577 263-464 (477)
69 TIGR00896 CynX cyanate transpo 99.4 8.6E-10 1.9E-14 116.4 31.5 326 168-557 21-350 (355)
70 PRK15075 citrate-proton sympor 99.4 5.1E-09 1.1E-13 114.3 38.4 358 148-557 16-396 (434)
71 TIGR01299 synapt_SV2 synaptic 99.4 1.2E-08 2.6E-13 118.8 42.6 153 147-320 163-319 (742)
72 PLN00028 nitrate transmembrane 99.4 8.6E-09 1.9E-13 114.3 39.5 290 127-461 13-317 (476)
73 TIGR02332 HpaX 4-hydroxyphenyl 99.3 5.4E-09 1.2E-13 113.6 36.4 373 146-559 7-399 (412)
74 PRK09669 putative symporter Ya 99.3 2.7E-08 5.8E-13 109.0 40.4 329 167-543 29-375 (444)
75 PRK10406 alpha-ketoglutarate t 99.3 1.5E-08 3.3E-13 110.5 37.7 340 152-541 27-383 (432)
76 TIGR00788 fbt folate/biopterin 99.3 1.8E-09 4E-14 119.6 28.0 353 156-547 35-404 (468)
77 PRK09952 shikimate transporter 99.3 3.2E-08 7E-13 108.4 36.6 132 418-554 271-405 (438)
78 PF13347 MFS_2: MFS/sugar tran 99.3 1.8E-08 3.9E-13 109.8 33.8 330 168-543 22-371 (428)
79 TIGR00885 fucP L-fucose:H+ sym 99.2 1.5E-07 3.3E-12 102.6 39.7 151 149-318 5-156 (410)
80 TIGR00898 2A0119 cation transp 99.2 1.8E-08 3.9E-13 111.6 32.7 323 181-546 126-462 (505)
81 PRK10077 xylE D-xylose transpo 99.2 1.8E-08 4E-13 110.4 31.8 338 180-543 53-413 (479)
82 PRK10642 proline/glycine betai 99.2 8.3E-08 1.8E-12 106.7 37.0 130 418-554 271-403 (490)
83 PRK11462 putative transporter; 99.2 5.1E-07 1.1E-11 100.0 41.5 270 154-466 16-297 (460)
84 PRK10207 dipeptide/tripeptide 99.2 2.8E-07 6.2E-12 102.9 38.8 162 145-324 12-175 (489)
85 PRK09584 tppB putative tripept 99.1 7.3E-07 1.6E-11 99.9 39.6 165 145-327 19-185 (500)
86 PF03825 Nuc_H_symport: Nucleo 99.1 1.1E-06 2.5E-11 95.7 38.6 187 389-580 200-392 (400)
87 COG2211 MelB Na+/melibiose sym 99.0 2.2E-06 4.7E-11 94.5 37.3 360 157-558 22-403 (467)
88 PF01306 LacY_symp: LacY proto 99.0 3.5E-07 7.5E-12 99.6 30.2 362 144-560 4-377 (412)
89 PRK15034 nitrate/nitrite trans 99.0 1.2E-05 2.6E-10 89.2 42.1 151 146-313 33-188 (462)
90 COG2271 UhpC Sugar phosphate p 99.0 5.8E-07 1.3E-11 96.9 29.7 403 145-583 27-437 (448)
91 KOG2615 Permease of the major 99.0 3.6E-08 7.7E-13 104.6 19.9 336 180-557 66-416 (451)
92 TIGR00887 2A0109 phosphate:H+ 98.9 2.1E-05 4.7E-10 87.7 40.0 153 150-317 19-176 (502)
93 PF03209 PUCC: PUCC protein; 98.9 3.1E-05 6.6E-10 83.7 37.0 332 184-552 14-360 (403)
94 PRK15462 dipeptide/tripeptide 98.8 4.8E-05 1E-09 85.2 39.1 164 145-326 7-172 (493)
95 TIGR00806 rfc RFC reduced fola 98.8 1.4E-05 3E-10 88.4 32.9 355 167-559 46-423 (511)
96 KOG1330 Sugar transporter/spin 98.8 4.2E-08 9E-13 106.5 12.7 358 150-555 32-412 (493)
97 TIGR01301 GPH_sucrose GPH fami 98.8 0.00019 4.2E-09 80.0 40.4 131 176-315 32-175 (477)
98 TIGR00805 oat sodium-independe 98.7 1.3E-06 2.7E-11 100.8 22.2 289 155-461 41-396 (633)
99 COG0738 FucP Fucose permease [ 98.7 0.00014 3E-09 78.4 35.6 271 157-467 23-307 (422)
100 COG2270 Permeases of the major 98.7 6.1E-06 1.3E-10 89.2 25.3 172 379-559 234-407 (438)
101 KOG0569 Permease of the major 98.5 0.00016 3.6E-09 80.4 30.7 149 389-542 257-416 (485)
102 TIGR01272 gluP glucose/galacto 98.4 0.00023 5E-09 74.8 27.5 153 393-557 136-292 (310)
103 KOG3764 Vesicular amine transp 98.4 1.7E-05 3.8E-10 85.0 18.6 322 180-564 104-435 (464)
104 PRK10489 enterobactin exporter 98.4 1.8E-05 3.8E-10 85.7 18.6 162 388-554 8-171 (417)
105 PF03092 BT1: BT1 family; Int 98.3 0.00016 3.4E-09 79.8 24.9 380 164-583 6-414 (433)
106 COG2807 CynX Cyanate permease 98.3 0.0026 5.5E-08 68.0 32.3 353 150-572 11-376 (395)
107 KOG2532 Permease of the major 98.3 0.0007 1.5E-08 75.4 29.2 356 181-581 72-447 (466)
108 TIGR00900 2A0121 H+ Antiporter 98.3 7.4E-05 1.6E-09 77.7 19.8 132 417-553 19-152 (365)
109 PF07690 MFS_1: Major Facilita 98.2 0.00013 2.9E-09 75.5 20.4 127 418-553 17-145 (352)
110 TIGR00899 2A0120 sugar efflux 98.2 0.00012 2.5E-09 77.2 20.1 157 145-323 197-354 (375)
111 TIGR00710 efflux_Bcr_CflA drug 98.2 0.00011 2.4E-09 77.5 18.9 126 419-554 27-154 (385)
112 KOG2816 Predicted transporter 98.2 0.00079 1.7E-08 74.9 25.8 304 190-545 70-381 (463)
113 PF06609 TRI12: Fungal trichot 98.1 0.007 1.5E-07 69.3 33.7 75 145-220 38-116 (599)
114 PF05631 DUF791: Protein of un 98.1 0.0016 3.5E-08 69.6 26.3 260 152-464 39-311 (354)
115 COG2223 NarK Nitrate/nitrite t 98.1 0.015 3.2E-07 63.4 33.7 382 145-583 9-404 (417)
116 PRK11646 multidrug resistance 98.1 0.00028 6E-09 76.5 20.5 127 418-553 31-159 (400)
117 PRK03633 putative MFS family t 98.1 0.00033 7.1E-09 75.0 20.6 130 415-553 24-154 (381)
118 PRK11551 putative 3-hydroxyphe 98.0 0.00045 9.7E-09 74.1 20.2 126 416-550 34-159 (406)
119 TIGR00895 2A0115 benzoate tran 98.0 0.00023 5E-09 75.0 17.4 127 420-555 40-167 (398)
120 PRK11102 bicyclomycin/multidru 98.0 0.0002 4.4E-09 75.8 17.1 121 417-546 11-131 (377)
121 PRK12382 putative transporter; 98.0 0.00059 1.3E-08 73.0 20.5 136 416-552 34-171 (392)
122 KOG2504 Monocarboxylate transp 98.0 0.0039 8.4E-08 70.3 27.5 359 180-573 79-468 (509)
123 KOG2533 Permease of the major 98.0 0.0017 3.6E-08 73.0 24.3 243 183-460 82-337 (495)
124 TIGR00897 2A0118 polyol permea 98.0 0.00093 2E-08 72.2 21.3 131 419-554 35-167 (402)
125 TIGR00892 2A0113 monocarboxyla 98.0 0.00026 5.7E-09 78.1 17.3 156 145-320 239-397 (455)
126 PRK05122 major facilitator sup 97.9 0.00041 9E-09 74.3 18.0 136 418-554 36-173 (399)
127 PRK10091 MFS transport protein 97.9 0.00084 1.8E-08 71.9 20.3 128 416-552 22-150 (382)
128 PRK11663 regulatory protein Uh 97.9 0.00065 1.4E-08 74.3 19.8 131 415-554 41-172 (434)
129 TIGR00893 2A0114 d-galactonate 97.9 0.00019 4.1E-09 74.9 14.6 125 421-554 18-143 (399)
130 PRK10054 putative transporter; 97.9 0.001 2.2E-08 71.9 20.7 128 416-553 26-156 (395)
131 PRK10473 multidrug efflux syst 97.9 0.0012 2.5E-08 70.7 20.8 120 420-549 26-146 (392)
132 TIGR00881 2A0104 phosphoglycer 97.9 0.00014 3E-09 75.9 12.5 122 416-546 14-135 (379)
133 TIGR00711 efflux_EmrB drug res 97.9 0.00069 1.5E-08 74.3 18.4 127 419-554 24-151 (485)
134 PRK03545 putative arabinose tr 97.8 0.0016 3.5E-08 69.8 20.2 125 420-553 32-157 (390)
135 PRK10213 nepI ribonucleoside t 97.8 0.0023 5E-08 69.2 21.4 128 418-554 41-169 (394)
136 COG3104 PTR2 Dipeptide/tripept 97.8 0.025 5.5E-07 62.8 29.1 410 143-578 17-485 (498)
137 PRK03699 putative transporter; 97.8 0.0024 5.1E-08 68.8 20.8 129 415-552 25-154 (394)
138 TIGR00891 2A0112 putative sial 97.8 0.0016 3.5E-08 68.9 19.0 128 418-554 33-161 (405)
139 TIGR02332 HpaX 4-hydroxyphenyl 97.8 0.0022 4.7E-08 69.8 20.1 120 425-553 36-156 (412)
140 cd06174 MFS The Major Facilita 97.7 0.0025 5.3E-08 65.5 19.2 130 416-554 18-148 (352)
141 PRK10504 putative transporter; 97.7 0.003 6.5E-08 69.4 20.8 131 416-555 29-160 (471)
142 TIGR00880 2_A_01_02 Multidrug 97.7 0.00067 1.4E-08 60.0 12.8 110 192-322 8-117 (141)
143 TIGR00885 fucP L-fucose:H+ sym 97.7 0.0037 8.1E-08 68.2 21.1 123 418-546 24-146 (410)
144 PF05977 MFS_3: Transmembrane 97.7 0.002 4.4E-08 72.9 19.3 173 394-571 7-181 (524)
145 TIGR00712 glpT glycerol-3-phos 97.7 0.0016 3.4E-08 71.3 17.5 126 420-550 49-175 (438)
146 TIGR00889 2A0110 nucleoside tr 97.7 0.0023 5.1E-08 69.9 18.8 159 145-320 206-373 (418)
147 PRK09528 lacY galactoside perm 97.7 0.0021 4.5E-08 69.7 18.3 77 392-468 5-82 (420)
148 TIGR01299 synapt_SV2 synaptic 97.7 0.0042 9.2E-08 73.0 21.7 115 420-543 190-304 (742)
149 PRK15402 multidrug efflux syst 97.6 0.0039 8.4E-08 67.1 19.8 127 419-554 35-162 (406)
150 TIGR00883 2A0106 metabolite-pr 97.6 0.0012 2.6E-08 69.3 14.7 156 148-320 220-377 (394)
151 PRK09705 cynX putative cyanate 97.6 0.0056 1.2E-07 66.0 20.2 129 416-554 28-157 (393)
152 TIGR02718 sider_RhtX_FptX side 97.6 0.0037 8.1E-08 67.0 18.5 163 145-322 206-370 (390)
153 PRK15011 sugar efflux transpor 97.6 0.0058 1.3E-07 65.8 20.0 154 147-322 216-370 (393)
154 PRK11652 emrD multidrug resist 97.6 0.0063 1.4E-07 65.1 20.0 127 419-554 30-157 (394)
155 PRK11128 putative 3-phenylprop 97.6 0.0053 1.1E-07 65.8 19.4 155 145-321 203-358 (382)
156 PRK03893 putative sialic acid 97.6 0.005 1.1E-07 68.0 19.5 126 420-554 43-169 (496)
157 PF01770 Folate_carrier: Reduc 97.5 0.21 4.6E-06 54.8 30.9 309 198-542 57-388 (412)
158 PRK08633 2-acyl-glycerophospho 97.5 0.0045 9.7E-08 75.7 20.3 119 430-554 45-164 (1146)
159 PRK12307 putative sialic acid 97.5 0.0058 1.3E-07 66.0 19.0 110 425-543 46-155 (426)
160 PRK11195 lysophospholipid tran 97.5 0.0067 1.5E-07 65.6 19.4 122 421-554 27-149 (393)
161 TIGR00890 2A0111 Oxalate/Forma 97.5 0.0057 1.2E-07 63.7 18.3 117 416-542 22-138 (377)
162 PRK11043 putative transporter; 97.5 0.0095 2.1E-07 63.9 20.4 123 423-554 32-155 (401)
163 TIGR00903 2A0129 major facilit 97.5 0.0064 1.4E-07 65.5 18.8 138 415-565 9-147 (368)
164 PRK11902 ampG muropeptide tran 97.5 0.0094 2E-07 64.3 19.9 77 145-221 207-285 (402)
165 PRK09874 drug efflux system pr 97.5 0.0095 2.1E-07 63.6 19.6 128 416-554 33-167 (408)
166 PRK14995 methyl viologen resis 97.4 0.018 3.9E-07 64.3 22.1 127 420-555 29-157 (495)
167 PRK11273 glpT sn-glycerol-3-ph 97.4 0.0084 1.8E-07 66.0 19.1 118 420-542 51-168 (452)
168 TIGR00886 2A0108 nitrite extru 97.4 0.013 2.9E-07 61.4 19.9 120 415-543 19-139 (366)
169 PRK10133 L-fucose transporter; 97.4 0.023 5E-07 62.6 22.1 125 419-549 48-172 (438)
170 TIGR00901 2A0125 AmpG-related 97.4 0.01 2.2E-07 62.5 18.5 132 416-555 7-145 (356)
171 TIGR00879 SP MFS transporter, 97.4 0.0077 1.7E-07 64.7 17.5 116 429-550 68-183 (481)
172 TIGR00880 2_A_01_02 Multidrug 97.4 0.0025 5.5E-08 56.2 11.6 107 439-554 5-112 (141)
173 PRK09556 uhpT sugar phosphate 97.3 0.0035 7.7E-08 69.2 14.9 123 416-543 48-171 (467)
174 TIGR00902 2A0127 phenyl propri 97.3 0.019 4.1E-07 61.6 19.8 154 145-321 203-358 (382)
175 TIGR00924 yjdL_sub1_fam amino 97.3 0.015 3.2E-07 64.9 19.1 130 416-554 29-166 (475)
176 TIGR00896 CynX cyanate transpo 97.3 0.013 2.8E-07 61.8 17.7 117 416-543 19-135 (355)
177 TIGR00792 gph sugar (Glycoside 97.3 0.0028 6.2E-08 68.5 12.8 159 145-320 220-382 (437)
178 PLN00028 nitrate transmembrane 97.3 0.026 5.6E-07 62.8 20.7 114 419-542 58-171 (476)
179 TIGR00806 rfc RFC reduced fola 97.2 0.038 8.3E-07 61.7 20.3 160 418-592 46-210 (511)
180 PF13347 MFS_2: MFS/sugar tran 97.2 0.0046 9.9E-08 67.5 13.2 78 145-222 223-300 (428)
181 PRK11010 ampG muropeptide tran 97.2 0.027 5.9E-07 63.0 19.5 164 146-326 221-386 (491)
182 TIGR00887 2A0109 phosphate:H+ 97.1 0.038 8.2E-07 61.7 20.2 118 428-548 52-169 (502)
183 PRK15403 multidrug efflux syst 97.1 0.036 7.8E-07 60.4 19.5 120 425-553 44-164 (413)
184 TIGR00894 2A0114euk Na(+)-depe 97.1 0.0091 2E-07 65.7 14.6 121 426-553 70-191 (465)
185 PRK10077 xylE D-xylose transpo 97.0 0.037 8.1E-07 60.7 18.9 122 427-548 50-174 (479)
186 PF11700 ATG22: Vacuole efflux 97.0 0.057 1.2E-06 60.5 20.5 170 145-328 279-453 (477)
187 PRK06814 acylglycerophosphoeth 97.0 0.041 8.9E-07 67.7 20.8 118 432-555 52-170 (1140)
188 PRK09669 putative symporter Ya 97.0 0.0081 1.8E-07 65.8 13.0 161 144-320 226-390 (444)
189 PRK09848 glucuronide transport 97.0 0.0081 1.8E-07 65.8 13.0 160 145-320 226-390 (448)
190 KOG0254 Predicted transporter 97.0 0.99 2.1E-05 50.7 32.9 40 183-222 90-129 (513)
191 COG2814 AraJ Arabinose efflux 96.9 0.11 2.3E-06 56.8 20.5 145 416-572 32-177 (394)
192 TIGR00882 2A0105 oligosacchari 96.9 0.051 1.1E-06 58.3 18.0 54 415-468 20-74 (396)
193 PRK10406 alpha-ketoglutarate t 96.8 0.11 2.4E-06 56.7 20.1 117 428-547 56-177 (432)
194 PRK09952 shikimate transporter 96.8 0.11 2.5E-06 56.8 20.1 148 155-319 258-407 (438)
195 PRK15034 nitrate/nitrite trans 96.7 0.16 3.5E-06 56.7 20.9 120 416-540 53-173 (462)
196 TIGR01301 GPH_sucrose GPH fami 96.7 0.066 1.4E-06 60.0 17.8 162 416-580 23-217 (477)
197 KOG0255 Synaptic vesicle trans 96.7 1.5 3.2E-05 49.1 33.5 116 180-317 116-231 (521)
198 TIGR00898 2A0119 cation transp 96.7 0.043 9.2E-07 60.9 16.1 117 425-550 117-236 (505)
199 PTZ00207 hypothetical protein; 96.7 0.2 4.4E-06 57.6 21.3 122 425-552 55-179 (591)
200 PRK15462 dipeptide/tripeptide 96.6 0.14 3E-06 57.7 19.5 131 416-554 28-163 (493)
201 PRK10642 proline/glycine betai 96.5 0.14 3E-06 57.0 18.9 61 159-219 262-323 (490)
202 PRK15075 citrate-proton sympor 96.5 0.094 2E-06 57.3 17.2 54 166-219 257-311 (434)
203 PRK09584 tppB putative tripept 96.5 0.23 5.1E-06 55.7 20.6 132 416-555 40-176 (500)
204 PTZ00207 hypothetical protein; 96.5 2.3 5.1E-05 49.0 28.5 157 142-316 19-180 (591)
205 KOG0569 Permease of the major 96.5 0.11 2.3E-06 58.3 17.2 129 434-568 62-192 (485)
206 PRK10207 dipeptide/tripeptide 96.2 0.32 7E-06 54.6 19.6 132 416-555 33-169 (489)
207 PRK10429 melibiose:sodium symp 96.0 0.21 4.5E-06 55.5 16.5 121 418-542 27-155 (473)
208 KOG4332 Predicted sugar transp 96.0 0.21 4.5E-06 51.9 14.6 60 156-216 46-106 (454)
209 KOG2563 Permease of the major 95.7 4.5 9.8E-05 45.0 27.7 285 145-464 40-333 (480)
210 COG2271 UhpC Sugar phosphate p 95.6 0.2 4.3E-06 54.9 13.7 183 385-580 18-206 (448)
211 TIGR00769 AAA ADP/ATP carrier 95.5 5.5 0.00012 44.8 36.9 192 385-580 252-466 (472)
212 TIGR00805 oat sodium-independe 95.5 0.11 2.5E-06 60.2 12.2 127 423-549 59-227 (633)
213 KOG2325 Predicted transporter/ 95.4 0.76 1.7E-05 51.5 17.8 153 146-318 30-191 (488)
214 COG2223 NarK Nitrate/nitrite t 95.4 0.66 1.4E-05 50.8 16.6 157 145-320 216-377 (417)
215 TIGR01272 gluP glucose/galacto 95.3 0.96 2.1E-05 47.5 17.6 154 145-323 138-295 (310)
216 PF03825 Nuc_H_symport: Nucleo 95.2 2.5 5.4E-05 46.3 21.1 56 408-463 13-68 (400)
217 KOG0254 Predicted transporter 95.2 0.6 1.3E-05 52.5 16.5 123 432-564 89-211 (513)
218 KOG2532 Permease of the major 95.0 0.42 9.2E-06 53.5 14.3 127 427-562 68-195 (466)
219 PF06813 Nodulin-like: Nodulin 94.8 1.3 2.7E-05 45.6 16.1 132 424-562 28-165 (250)
220 COG0477 ProP Permeases of the 94.8 1.7 3.7E-05 42.2 16.6 149 152-318 7-158 (338)
221 PF12832 MFS_1_like: MFS_1 lik 94.7 0.3 6.4E-06 40.9 9.3 52 416-467 19-70 (77)
222 PF00083 Sugar_tr: Sugar (and 94.7 9.5E-06 2.1E-10 88.4 -23.2 40 182-221 46-85 (451)
223 PRK11462 putative transporter; 94.6 1.8 3.9E-05 48.1 18.0 115 426-542 39-158 (460)
224 KOG4686 Predicted sugar transp 94.5 0.33 7.1E-06 50.9 10.6 128 171-320 288-416 (459)
225 PF01306 LacY_symp: LacY proto 94.2 0.3 6.5E-06 53.7 10.6 56 414-469 24-80 (412)
226 COG2807 CynX Cyanate permease 93.6 5.3 0.00012 43.3 18.2 135 426-573 41-176 (395)
227 KOG4686 Predicted sugar transp 93.5 3.2 6.9E-05 43.8 15.7 154 397-562 264-421 (459)
228 COG0738 FucP Fucose permease [ 93.3 5.4 0.00012 43.8 17.7 119 419-543 34-153 (422)
229 PF06609 TRI12: Fungal trichot 93.2 3.9 8.4E-05 47.3 17.5 132 393-536 36-172 (599)
230 KOG2504 Monocarboxylate transp 93.0 2.6 5.7E-05 47.7 15.8 155 145-320 296-452 (509)
231 KOG0253 Synaptic vesicle trans 92.5 20 0.00042 39.5 25.9 136 70-221 12-152 (528)
232 KOG0255 Synaptic vesicle trans 92.5 3.1 6.6E-05 46.6 15.4 118 427-554 113-231 (521)
233 KOG3626 Organic anion transpor 92.0 7.3 0.00016 45.9 17.8 82 381-462 376-459 (735)
234 KOG1330 Sugar transporter/spin 91.9 0.15 3.3E-06 56.3 3.9 113 427-549 63-176 (493)
235 TIGR00788 fbt folate/biopterin 91.0 0.91 2E-05 50.6 9.0 131 178-320 283-415 (468)
236 PF12832 MFS_1_like: MFS_1 lik 90.6 0.32 6.9E-06 40.7 3.8 46 171-217 24-70 (77)
237 COG2270 Permeases of the major 89.6 4.1 8.9E-05 44.9 12.2 154 145-320 250-405 (438)
238 PF06779 DUF1228: Protein of u 88.7 3.6 7.7E-05 35.3 8.7 55 415-469 10-64 (85)
239 KOG3574 Acetyl-CoA transporter 87.9 48 0.001 36.6 18.9 149 393-542 261-417 (510)
240 PRK03612 spermidine synthase; 87.4 55 0.0012 37.3 20.1 53 148-204 15-67 (521)
241 PF03137 OATP: Organic Anion T 87.1 0.19 4E-06 57.3 0.0 175 382-556 290-515 (539)
242 KOG3764 Vesicular amine transp 86.8 4 8.6E-05 44.8 9.8 119 427-554 101-221 (464)
243 COG2211 MelB Na+/melibiose sym 86.6 11 0.00025 42.1 13.6 152 426-580 42-204 (467)
244 KOG3762 Predicted transporter 86.4 11 0.00024 42.9 13.3 153 420-584 394-552 (618)
245 KOG3810 Micronutrient transpor 85.8 58 0.0013 35.5 19.5 244 278-542 119-374 (433)
246 PF05631 DUF791: Protein of un 83.9 63 0.0014 35.0 17.1 149 426-583 63-219 (354)
247 PF00083 Sugar_tr: Sugar (and 83.7 0.028 6.1E-07 61.2 -8.4 119 431-555 45-163 (451)
248 TIGR00926 2A1704 Peptide:H+ sy 83.6 45 0.00097 39.2 17.3 50 417-469 7-61 (654)
249 PF03209 PUCC: PUCC protein; 83.3 65 0.0014 35.5 17.2 82 503-584 98-181 (403)
250 KOG2615 Permease of the major 83.1 11 0.00023 41.4 10.9 139 160-319 267-415 (451)
251 PF03219 TLC: TLC ATP/ADP tran 81.2 90 0.0019 35.4 18.0 83 384-466 267-353 (491)
252 KOG0253 Synaptic vesicle trans 80.6 9.5 0.00021 41.8 9.4 93 199-312 398-490 (528)
253 KOG3098 Uncharacterized conser 77.9 1.3E+02 0.0027 33.9 25.5 141 154-316 16-162 (461)
254 KOG2325 Predicted transporter/ 76.2 54 0.0012 37.1 14.1 46 417-462 54-101 (488)
255 KOG2533 Permease of the major 69.5 60 0.0013 36.8 12.7 150 427-585 76-232 (495)
256 KOG0637 Sucrose transporter an 69.3 2E+02 0.0044 32.4 17.5 120 182-313 67-200 (498)
257 KOG3762 Predicted transporter 66.5 13 0.00029 42.4 6.5 52 416-467 30-81 (618)
258 KOG0252 Inorganic phosphate tr 65.1 20 0.00043 40.3 7.4 148 428-582 80-245 (538)
259 TIGR00769 AAA ADP/ATP carrier 62.0 2.7E+02 0.006 31.4 20.9 120 430-552 41-188 (472)
260 COG3263 NhaP-type Na+/H+ and K 59.4 2E+02 0.0044 32.2 13.6 103 438-562 194-297 (574)
261 PF03092 BT1: BT1 family; Int 57.6 2.5E+02 0.0055 30.9 14.8 61 501-562 93-157 (433)
262 PF05978 UNC-93: Ion channel r 51.7 2.2E+02 0.0047 27.1 15.1 95 434-542 43-137 (156)
263 COG4232 Thiol:disulfide interc 37.3 2.9E+02 0.0063 31.9 11.1 21 388-408 236-256 (569)
264 PF09925 DUF2157: Predicted me 33.6 3.9E+02 0.0085 24.7 10.8 81 130-214 9-90 (145)
265 PF06779 DUF1228: Protein of u 29.7 2.6E+02 0.0057 23.9 7.1 52 170-221 15-66 (85)
266 KOG2563 Permease of the major 29.4 2E+02 0.0044 32.3 8.1 74 501-574 272-346 (480)
267 PF01544 CorA: CorA-like Mg2+ 28.8 81 0.0018 32.1 4.8 54 527-580 229-289 (292)
268 PRK03612 spermidine synthase; 27.3 9.6E+02 0.021 27.3 20.3 32 427-458 45-76 (521)
269 PF13955 Fst_toxin: Toxin Fst, 25.9 75 0.0016 20.1 2.3 17 304-320 2-18 (21)
270 PF05978 UNC-93: Ion channel r 25.5 4.6E+02 0.0099 24.9 8.8 63 195-271 50-112 (156)
271 TIGR02973 nitrate_rd_NapE peri 24.6 1.1E+02 0.0023 22.9 3.2 31 172-202 10-42 (42)
272 PF06796 NapE: Periplasmic nit 24.3 99 0.0021 24.5 3.3 29 174-202 25-55 (56)
273 TIGR02972 TMAO_torE trimethyla 24.0 1.1E+02 0.0023 23.4 3.2 30 173-202 16-47 (47)
274 KOG0252 Inorganic phosphate tr 23.0 71 0.0015 36.1 3.1 72 148-221 39-123 (538)
275 TIGR00383 corA magnesium Mg(2+ 21.4 2.5E+02 0.0054 29.4 6.8 48 526-573 252-306 (318)
276 COG4132 ABC-type uncharacteriz 20.4 6E+02 0.013 26.0 8.6 33 388-424 187-224 (282)
No 1
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=8.2e-74 Score=620.05 Aligned_cols=419 Identities=34% Similarity=0.546 Sum_probs=360.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 147 r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
|..++||++|++|+||||+|+||+|+++..++| |++++++|++++.+..++|||.+|.|+||.||+|+++.+.++|++.
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLS 81 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHH
Confidence 457899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCC--ccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTS--SSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~--~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~ 303 (598)
++++|+++...+...... +.+....+++++.++++++++++.++++++|||||++|+++ ++++|+++|++|||||++
T Consensus 82 v~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~-~~~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 82 VAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGG-DPGALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCC-ChhhHHHHHHHHHHHHHH
Confidence 999998755444332211 13455678999999999999999999999999999999965 467999999999999999
Q ss_pred HHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cccccccccccccCCCCCC------CCCCC
Q 007555 304 CEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS--GVLDRAKCSQSCCRTSNEG------PVPDA 375 (598)
Q Consensus 304 ~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~--~~l~~~~~~~~~~~~~~~~------~~~~~ 375 (598)
||++||.+.|.++++.++..++.+.++.|++|++.+ ++++.++|+ |.+++++++++.+.+.+++ ..+..
T Consensus 161 ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vE---y~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (432)
T PF06963_consen 161 CKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVE---YFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSI 237 (432)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhChHhcCCCCCccccccccccccccccchhhH
Confidence 999999999999999998888888877776666555 467788863 4444433322211111000 00011
Q ss_pred ccchhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 007555 376 DNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYL 455 (598)
Q Consensus 376 ~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l 455 (598)
.+..++.+++.++||+.|++||+++++++++++|+|| ++|+++|++|++++|+++..+|.+||.|++.|++||+++|++
T Consensus 238 ~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~TV-Lsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l 316 (432)
T PF06963_consen 238 LKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFTV-LSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWL 316 (432)
T ss_pred HHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123345677789999999999999999999999998 689999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccc-cchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHH
Q 007555 456 VRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS-QQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTT 534 (598)
Q Consensus 456 ~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~-~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv 534 (598)
+||+|+.|+|+|++++|..|+.+++..+|....+ ...+..++++|+++||+|+|+||+++++++||.||+++||+|+|+
T Consensus 317 ~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gv 396 (432)
T PF06963_consen 317 MKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGV 396 (432)
T ss_pred HHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHH
Confidence 9999999999999999999999999977754322 345677788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCcchhHHHHHHHHHHH
Q 007555 535 EISVASLVESVMLGVAIIANDVSHFGFLATLSLLSV 570 (598)
Q Consensus 535 ~~sl~~~~~ll~~~~~i~~~~~~~f~~l~l~S~~~V 570 (598)
|+++|+++|+++++++|++|+|++|++++++|+++|
T Consensus 397 q~sl~~lf~ll~~~~~ii~~~P~~F~~lv~iS~~~V 432 (432)
T PF06963_consen 397 QNSLQSLFELLSFVLTIIFPRPSQFGWLVLISVAAV 432 (432)
T ss_pred HHHHHHHHHHHHHHHHhccCChHhcChHHHhhheeC
Confidence 999999999999999999999999999999999865
No 2
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-54 Score=441.64 Aligned_cols=431 Identities=23% Similarity=0.338 Sum_probs=354.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~ 223 (598)
+.+.-..||.|+++++||||+|+|++.+|+..+.| |++.+++|+++.....+++||++|.|+|..+|+|++...-++|+
T Consensus 25 ls~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqN 104 (503)
T KOG2601|consen 25 LSSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQN 104 (503)
T ss_pred ccceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhcc
Confidence 44556789999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcc---CCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHH
Q 007555 224 AAQLLSAAMIIHAHTVIP---TSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI 300 (598)
Q Consensus 224 ~~v~ls~~~l~~~~~~~~---~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~i 300 (598)
+.+.++++++...+.... .+..+ ....++.+.+.+++.++++.|.++.++|||++++..+++++.++++|+.++++
T Consensus 105 lSv~vagglvi~~l~~~~~~~~t~pv-~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~i 183 (503)
T KOG2601|consen 105 LSVIVAGGLVITLLVHKDLKSATSPV-FTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGI 183 (503)
T ss_pred HHHHHHHHHHhhheeecchhcccccH-HHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhh
Confidence 998877766544333220 01111 12344555578899999999999999999999997666678999999999999
Q ss_pred HHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--cccccccc-----------ccCCC
Q 007555 301 DLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVL--DRAKCSQS-----------CCRTS 367 (598)
Q Consensus 301 d~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l--~~~~~~~~-----------~~~~~ 367 (598)
|+.+++++|+.-|.++++++......+. .+|+..+++++++++.++|.+.+ +..+..+. .|..+
T Consensus 184 Dq~tn~Lapv~tg~Iitfvsl~~~~g~f---~~w~~vsm~~ey~ll~~vy~g~palavs~~~k~~rs~~~q~~~~~~~~s 260 (503)
T KOG2601|consen 184 DQSTNLLAPVITGLIITFVSLRASAGTF---AAWALVSMWVEYWLLISVYIGVPALAVSKGRKNLRSKESQVELRDCQSS 260 (503)
T ss_pred hhhhhchhhhhhcccceeechhhhhhhh---HHHHHHHHHHHHHHHHHHHhCCcHHhhhcchhhhhhhhheeeeecCCcc
Confidence 9999999999999999999875433322 24666777777788888875433 21111100 01100
Q ss_pred C-------C---CCCCCCcc---c-hhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhH
Q 007555 368 N-------E---GPVPDADN---I-VDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSI 433 (598)
Q Consensus 368 ~-------~---~~~~~~~~---~-~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~ 433 (598)
. + +..+++.. . .+-..+..+.+|+.|++||++++.+.++++|+++ ++|+.+++.++...|.+-..
T Consensus 261 ~~v~~~~s~~~~~~~~~~~~~~~~l~~~~~~sF~~~w~~y~nq~vvl~g~slallf~tv-l~f~~L~t~~~~~~G~p~~i 339 (503)
T KOG2601|consen 261 FPVAGTHSEGFMTNLASRYGILVILPRFSISSFRSAWRVYFNQEVVLPGVSLALLFFTV-LGFGVLMTATLFWPGSPMYI 339 (503)
T ss_pred cccccccceeeeccccccCccccccchhhhHHHHhHHHhhccCeeeehhhHHHHHHHHH-HhhheeeeeeeecCCCCcee
Confidence 0 0 00000000 0 0113466789999999999999999999999999 78999999999889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhh
Q 007555 434 IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDI 513 (598)
Q Consensus 434 iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl 513 (598)
+|+.+++.+.-|+.+++.++...+|.++.|++.|..+.|.. . ...+..++++|++.+|+|+|+||+
T Consensus 340 ~gi~~g~Sa~tg~~~tv~~~~~~~~~nl~rtg~ws~~sq~s-------------v-~~isv~ll~agVaaaR~GLW~fDl 405 (503)
T KOG2601|consen 340 IGIGRGISAGTGLAATVHYPLMQSRTNLLRTGLWSFWSQDS-------------V-SKISVYLLFAGVAAARLGLWMFDL 405 (503)
T ss_pred hhhccCcchhhhhhhhhhcccccCccCCCcceehhhccccc-------------c-hhHHHHHHHHHHHHHHhhHHhccH
Confidence 99999999999999999999999999999999998765532 0 124566778899999999999999
Q ss_pred hhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHhhhhccCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcccc
Q 007555 514 VGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFS 593 (598)
Q Consensus 514 ~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~~i~~~~~~~f~~l~l~S~~~V~~a~~l~~~~l~~~~~~~~~l~~ 593 (598)
.++|++|+.|||++|+.|+|+|+++|+.++++.++++|++|+|.+|+.+.++|+++|.++..+|..++.+. +.|.+|
T Consensus 406 AVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilvIi~pnp~~F~iltliS~~fVs~g~m~y~~~l~q~---~~~~~h 482 (503)
T KOG2601|consen 406 AVTQIMQETVPESERCVVFGVQNSLNSALDLLKDILVIIVPNPKDFGILTLISFSFVSLGHMFYTFYLAQI---RSHNFH 482 (503)
T ss_pred HHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEEEEecCccceeeeeeehhhHhhhhhhhhhhhhhhc---cccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888776 889999
Q ss_pred cCCC
Q 007555 594 FDPQ 597 (598)
Q Consensus 594 ~~~~ 597 (598)
+|+.
T Consensus 483 l~~~ 486 (503)
T KOG2601|consen 483 LEKI 486 (503)
T ss_pred hhcC
Confidence 9875
No 3
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=3.7e-42 Score=383.37 Aligned_cols=391 Identities=17% Similarity=0.088 Sum_probs=288.7
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHH
Q 007555 142 TPAHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (598)
Q Consensus 142 ~~~r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~ 221 (598)
.|.|||+|+++|+||++|++||.++.+|++|++.++|+|+..+|++.++.++|.++++|++|+++||+||||+|+.+|++
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~ 84 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLL 84 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Confidence 57799999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHH
Q 007555 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (598)
Q Consensus 222 q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id 301 (598)
+.+..++.+ ++.+ .+ ....+.+++..++.|+...+++++.+..+ |.+|++| +|.++|+.++...
T Consensus 85 ~~~~~~~L~-~l~~---~~----~~~~~~Ll~~~fl~g~~~a~~~PA~~A~i-----p~lV~~~---~L~~A~al~s~~~ 148 (524)
T PF05977_consen 85 RALVALLLA-VLAF---FG----LLSPWLLLILTFLLGIGSAFFNPAWQAII-----PELVPKE---DLPAANALNSISF 148 (524)
T ss_pred HHHHHHHHH-HHHH---hC----cCCHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhccHh---hHHHHHHHHHHHH
Confidence 876533322 1122 11 12246678888999999999999998865 4488864 8999999999999
Q ss_pred HHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhh
Q 007555 302 LLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDV 381 (598)
Q Consensus 302 ~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (598)
++++++||.+||++++.+|+...+.+++ .+++..+ ..+.+.. + ++++++ ...++
T Consensus 149 niar~iGPalgG~Lva~~G~~~~f~ina----lsfl~~i---~~l~~~~-~----~~~~~~--------------~~~e~ 202 (524)
T PF05977_consen 149 NIARIIGPALGGILVAFFGAAAAFLINA----LSFLISI---LALLRWK-P----PPPPSS--------------LPRER 202 (524)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHH----HHHHHHH---HHHHHcc-c----cccccc--------------cchhh
Confidence 9999999999999999998765555443 3333222 2223321 1 111000 01246
Q ss_pred hHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007555 382 GIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (598)
Q Consensus 382 ~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg 460 (598)
++++++||+||++++|.++..+..+.+++.+...+..+++.+.++ +|.++..||++.++.++|+++|+++.+++.+|++
T Consensus 203 ~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~ 282 (524)
T PF05977_consen 203 FFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLS 282 (524)
T ss_pred hhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 889999999999999998876665555443323455677777774 7999999999999999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHH
Q 007555 461 ILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS 540 (598)
Q Consensus 461 ~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~ 540 (598)
..+....+.... ..+...+.... ..++.+..+++.+++....+...++++|+.+|+++||||+|+..++..
T Consensus 283 ~~~lv~~~~~~~----a~~~~~lal~~-----~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~ 353 (524)
T PF05977_consen 283 SRRLVLLASLLF----ALALLLLALSP-----SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFF 353 (524)
T ss_pred cchhhHHHHHHH----HHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHH
Confidence 766554332211 11111111111 112222233344455566788899999999999999999999999999
Q ss_pred HHH-HHHHHhhhhccCcchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 007555 541 LVE-SVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLN 583 (598)
Q Consensus 541 ~~~-ll~~~~~i~~~~~~~f~~l~l~S~~~V~~a~~l~~~~l~~ 583 (598)
+.. +++++.|.+.+..+.-..+.+.+++.+..+.+.+...+++
T Consensus 354 g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~~l~~ 397 (524)
T PF05977_consen 354 GGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRFPLRQ 397 (524)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 885 5556668887776666666666655555554444444443
No 4
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.96 E-value=9.9e-26 Score=242.82 Aligned_cols=381 Identities=17% Similarity=0.081 Sum_probs=245.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 146 ~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
+|+|+.++.|++++.+||.+..++++.++.+++.|...++....+..+|..+++|++|.++||++|||+|+.+++++.+.
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLG 81 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHH
Confidence 57899999999999999999999999988777779889999999999999999999999999999999999999876543
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~ 305 (598)
.+ .+ .+ .. + .++.-++.|.......++....+ +| ++++ +++.++|+.++.....+.
T Consensus 82 ~~---~~-~~--~~-----~-----~~~~r~l~G~~~a~~~pa~~a~i-~~----~~~~---~~~~~a~~~~~~~~~~~~ 137 (393)
T PRK11195 82 CL---LM-LF--GI-----H-----PLLAYGLVGIGAAAYSPAKYGIL-TE----LLPG---EKLVKANGWMEGSTIAAI 137 (393)
T ss_pred HH---HH-HH--HH-----H-----HHHHHHHHHHHHHHHHHHHHHHH-HH----HcCH---HHHHHHHHHHHHHHHHHH
Confidence 11 11 11 11 0 12333456777777777776544 34 5654 489999999999999999
Q ss_pred HhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHH
Q 007555 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEA 385 (598)
Q Consensus 306 i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (598)
++||.++|.++... ....+. .....+.... +....+ |+.++++++ .+. .....+++
T Consensus 138 ~~Gp~lgG~l~~~~-~~~~~~----i~~~~~~~~~---~~~~~l--~~~~~~~~~-----------~~~---~~~~~~~~ 193 (393)
T PRK11195 138 LLGTVLGGALADPH-AEAALA----VCALIYLLAA---LFNLFI--PRLGARRPG-----------QSW---NPIALLRD 193 (393)
T ss_pred HHHHHHHHHHHHHH-HHHHHH----HHHHHHHHHH---HHHhcC--CCCcccccc-----------cCC---CHHHHHHH
Confidence 99999999999853 211111 1111111111 111111 211100000 000 01235678
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 007555 386 IKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA 464 (598)
Q Consensus 386 i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~ 464 (598)
+++++++++++|.++..+....+++........+++.|+.+ .|+++.++|.+.+..++|+++|++..+++.+|.+..+.
T Consensus 194 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~ 273 (393)
T PRK11195 194 FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRV 273 (393)
T ss_pred HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccch
Confidence 88999999999988776544333222212233345556653 79999999999999999999999999999888776554
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCcc-chhHHHHHHHHHHHHH
Q 007555 465 GAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSK-ANLIGTTEISVASLVE 543 (598)
Q Consensus 465 g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~-rGRV~sv~~sl~~~~~ 543 (598)
...++..... ........ ..+.......+.+++...++.+.++.+|+..|+|. +||++|+.+...++..
T Consensus 274 ~~~g~~~~~~----~~~~~~~~------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~ 343 (393)
T PRK11195 274 LPAGILMGLV----VLLMALQH------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAM 343 (393)
T ss_pred HHHHHHHHHH----HHHHHHHh------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHH
Confidence 4433211100 00111111 11111222323344555678889999999888776 8999999999999997
Q ss_pred HHHHHhhhhccCcchhHHHHHHHHHH-HHHHHHHHHHHhcCC
Q 007555 544 SVMLGVAIIANDVSHFGFLATLSLLS-VVGAAWMFCHWLLNP 584 (598)
Q Consensus 544 ll~~~~~i~~~~~~~f~~l~l~S~~~-V~~a~~l~~~~l~~~ 584 (598)
+++..+.-.....+-.....+..++. +..+.+.+++|-+|.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK11195 344 LLMLGLYSLLVKLGVPVVAVIVGFGLLVALAMALLWRWHRRN 385 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66655522222223333333333333 344455566665543
No 5
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=2.9e-24 Score=260.01 Aligned_cols=362 Identities=15% Similarity=0.019 Sum_probs=240.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCh-----hHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIA-LLHPSL-----LPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICL 218 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~-~lt~S~-----l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~ 218 (598)
|+++|+.+|.+|++|.+||.+..++++.++. .++++. ...++...+..+|.++++|++|.++||++||++|+..
T Consensus 9 ~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~ 88 (1140)
T PRK06814 9 KSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKIL 88 (1140)
T ss_pred hccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHH
Confidence 7788999999999999999999999887764 555543 6788888899999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHH
Q 007555 219 NTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLN 298 (598)
Q Consensus 219 d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~ 298 (598)
+.+..+..++. ++.+ ... + .+.+++..++.|..+.++.++....+ +| +++++ ++.++|+.++
T Consensus 89 ~~~~~~~~~~~--~~~~--~~~----s--~~~l~~~~~l~gi~~a~~~p~~~a~l-~~----~~~~~---~~~~a~~~~~ 150 (1140)
T PRK06814 89 KFAEIGIAALA--IYGF--HLN----S--VPLLFAALFLMGIHSALFGPIKYSIL-PD----HLNKD---ELLGANALVE 150 (1140)
T ss_pred HHHHHHHHHHH--HHHH--HHh----h--HHHHHHHHHHHHHHHHhhchHHHHhh-Hh----hcCcc---ccchhhHHHH
Confidence 76544432211 1111 111 1 35677778888998998888887654 44 55543 8999999999
Q ss_pred HHHHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccc
Q 007555 299 RIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNI 378 (598)
Q Consensus 299 ~id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 378 (598)
...+++.++||.++|+++...+....+... + ...+..+ .+..++ +.. ++.++ +. . .
T Consensus 151 ~~~~ig~~igp~l~g~l~~~~~~~~~~~~~-~---~~~~~~~---~~~~~~--~~~---~~~~~-------~~--~---~ 206 (1140)
T PRK06814 151 AGTFIAILLGTIIGGLATISGNFVILVALL-M---GIAVLGW---LASLFI--PKT---GNAAP-------DL--K---I 206 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHHH-H---HHHHHHH---HHHhhC--CCC---CCCCC-------CC--e---e
Confidence 999999999999999999987754433111 1 1111111 111222 111 11000 00 0 0
Q ss_pred hhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007555 379 VDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVR 457 (598)
Q Consensus 379 ~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~r 457 (598)
..+.+++.++++++.+++|.++..+....+.+.+...+...++.|+.+ .|.++..+|++.+..++|+++|+++.+++.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~ 286 (1140)
T PRK06814 207 DRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSE 286 (1140)
T ss_pred ccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 123456788999999999988775544333222213445567778875 7999999999999999999999999999987
Q ss_pred hhhhhHHHHHHHHH-HHHHHHHHHH---------------HHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhc
Q 007555 458 RLGILKAGAAGLIF-QASLLAMAVA---------------VYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQT 521 (598)
Q Consensus 458 rlg~~r~g~~~l~~-q~~~L~~~v~---------------~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~ 521 (598)
+.+..+...++... ....+.++.. .++... ..+.+..+.++..++..+++++..+++|+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 361 (1140)
T PRK06814 287 GRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKR-----HGWRILIDLFGLAAAGGLYIVPLFAALQA 361 (1140)
T ss_pred CceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhccc-----ccHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 65543332222111 1111111110 000000 11112222333445566788899999999
Q ss_pred cCCCccchhHHHHHHHHHHHHH-HHHHHhhhhc
Q 007555 522 GIPSSKANLIGTTEISVASLVE-SVMLGVAIIA 553 (598)
Q Consensus 522 ~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~ 553 (598)
.+|++++||++|+.+++.++.. +.+.+.+.+.
T Consensus 362 ~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 362 WANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred hCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988875 4444445554
No 6
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=3.4e-23 Score=223.54 Aligned_cols=380 Identities=13% Similarity=0.030 Sum_probs=249.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
++|+|+.++++++++.+|+.+..+++|+++.+.+.|....++......++.++.++++|.++||++||+++..++++..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~ 94 (417)
T PRK10489 15 THPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGL 94 (417)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHH
Confidence 68899999999999999999999999999999888999999999999999999999999999999999999887765443
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
..... ........ .+ .+.+++..++.|....+..++.+..+ +.++++ ++..++|+.......++
T Consensus 95 ~~~~~----~~~~~~~~--~~--~~~l~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~g 158 (417)
T PRK10489 95 GFIGL----ALNAFLPE--PS--LLAIYLLGLWDGFFGSLGVTALLAAT-----PALVGR---ENLMQAGAITMLTVRLG 158 (417)
T ss_pred HHHHH----HHHHHcCC--Cc--HHHHHHHHHHHHHHHHHHHHHHhhhh-----hhccCH---HHHHHHHHHHHHHHhHH
Confidence 31111 11000110 11 23344555556666666555554433 335554 37899999999999999
Q ss_pred HHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHH
Q 007555 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (598)
Q Consensus 305 ~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (598)
.++||.++|.++...+......+.....+ ... ....++ |+. +++++ + .++..+
T Consensus 159 ~~~g~~l~g~l~~~~~~~~~~~~~~~~~~---~~~----~~~~~l--~~~---~~~~~-----------~----~~~~~~ 211 (417)
T PRK10489 159 SVISPALGGLLIAAGGVAWNYGLAAAGTF---ITL----LPLLRL--PAL---PPPPQ-----------P----REHPLR 211 (417)
T ss_pred HHhHHHHHHHHHHHHhhHHHHHHHHHHHH---HHH----HHHHhC--CCC---CCCCc-----------c----cccchH
Confidence 99999999999887665443333221111 111 122222 111 11000 0 011245
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 007555 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (598)
Q Consensus 385 ~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r 463 (598)
+.++++++.+++|.++..+.....+... ..+....+.|..+ .|+++...|++.+..++++++|.++.+++.+|.+..+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~ 290 (417)
T PRK10489 212 SLLAGFRFLLASPVVGGIALLGGLLTMA-SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGL 290 (417)
T ss_pred HHHHHHHHHHcChHHHHHHHHHHHHHHH-HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcch
Confidence 6788999999999877655444332222 2444566678776 8999999999999999999999999999988766544
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH
Q 007555 464 AGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 543 (598)
Q Consensus 464 ~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ 543 (598)
....+... ..++...+... + ... ....+.....++....+....+++|+.+|+++|||++|+.++..++..
T Consensus 291 ~l~~~~~~----~~~~~~~~~~~-~--~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 361 (417)
T PRK10489 291 LMLLSTLG----SFLAVGLFGLM-P--MWI--LAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGD 361 (417)
T ss_pred HHHHHHHH----HHHHHHHHHcc-c--hHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhH
Confidence 43332211 11121111111 1 111 111122223334444566777899999999999999999998887664
Q ss_pred -HHHHHhhhhccCcchhHHHHHHHHHHHHHHHHHH
Q 007555 544 -SVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMF 577 (598)
Q Consensus 544 -ll~~~~~i~~~~~~~f~~l~l~S~~~V~~a~~l~ 577 (598)
+.+.+.|.+.+..+......+.+.+.+..+....
T Consensus 362 ~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 396 (417)
T PRK10489 362 AIGAALLGGLGAMMTPVASASASGFGLLIIGVLLL 396 (417)
T ss_pred hHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Confidence 6667778887776666555555555555544443
No 7
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.91 E-value=1e-20 Score=197.02 Aligned_cols=358 Identities=15% Similarity=0.129 Sum_probs=235.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHH
Q 007555 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLL 228 (598)
Q Consensus 149 f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~l 228 (598)
|+.++.+++++.+|+.+...++|+|..+.+.|...+++...+..++.++.+|+.|.++||++|||+++.+.++..+...
T Consensus 1 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~- 79 (365)
T TIGR00900 1 FRLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVA- 79 (365)
T ss_pred CeehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHH-
Confidence 5678999999999999999999999999877999999999999999999999999999999999999987765433311
Q ss_pred HHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhh
Q 007555 229 SAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (598)
Q Consensus 229 s~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~G 308 (598)
+..+..... ....+.+++..++.+.......++....+ .| +.++ ++..++|+..+....++.++|
T Consensus 80 ---~~~~~~~~~----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~-~~----~~~~---~~~~~~~~~~~~~~~~g~~~g 144 (365)
T TIGR00900 80 ---VLPFVALLG----GLNIWQVYVLAGILAIAQAFFTPAYQAML-PD----LVPE---EQLTQANSLSQAVRSLFYIVG 144 (365)
T ss_pred ---HHHHHHHcC----CCcHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh----cCCH---HHHHHHHhHHHHHHHHHHHHH
Confidence 111211111 00124455666666777776666554432 33 5554 378999999999999999999
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHH
Q 007555 309 ASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKL 388 (598)
Q Consensus 309 P~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~e 388 (598)
|.++|.+....+......+.....+.+ .+ .+..+..|+. +++++ + + ..++..++.++
T Consensus 145 ~~l~~~l~~~~g~~~~~~~~~~~~~~~---~~----~~~~~~~~~~--~~~~~--------~---~---~~~~~~~~~~~ 201 (365)
T TIGR00900 145 PGIGGLMYATLGIKWAIWVDAVGFAIS---AL----LIVSVRIPEL--AASEI--------Q---A---LSNAVLRDTRE 201 (365)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHH---HH----HHHhcccccC--CCccc--------c---c---cchhHHHHHHh
Confidence 999999998777544333322111111 11 1111111111 00000 0 0 01134567788
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHhhhhhh-HHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 007555 389 GWKEYMQQPVLPASLAYVLLCLNVVLTPG-SLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGA 466 (598)
Q Consensus 389 G~~~~~~~pvll~~l~~~lL~~~vll~f~-~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~ 466 (598)
+++..+++|.++..+....++........ ...+.|..+ .|.++.++|.+.+..++++++|+++.+++.||.+..+...
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 281 (365)
T TIGR00900 202 GIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMT 281 (365)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH
Confidence 99999999988765544444332212233 445556665 7999999999999999999999999999999998766554
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HH
Q 007555 467 AGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SV 545 (598)
Q Consensus 467 ~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll 545 (598)
.+.... ..+........ . ....+....++..++....+....++.|+.+|+++||++.|+.+++.++.. +.
T Consensus 282 ~~~~~~----~~~~~~~~~~~--~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g 353 (365)
T TIGR00900 282 GAIFVI----GLAILVVGLTP--P--NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLG 353 (365)
T ss_pred HHHHHH----HHHHHHHHhhc--h--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 332211 11111111111 0 011222223333444455677888999999999999999999999998875 44
Q ss_pred HHHhhhhc
Q 007555 546 MLGVAIIA 553 (598)
Q Consensus 546 ~~~~~i~~ 553 (598)
+.+.|.+.
T Consensus 354 ~~~~g~l~ 361 (365)
T TIGR00900 354 LILAGPLA 361 (365)
T ss_pred HHHHHHHH
Confidence 44445543
No 8
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.87 E-value=7.9e-19 Score=212.22 Aligned_cols=357 Identities=14% Similarity=0.060 Sum_probs=228.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP---SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~---S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~ 221 (598)
++++|+.++.+++++.+++++...++..++....+ +....++...+..+|.++++|++|.++||++||++|+.+.++
T Consensus 7 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~ 86 (1146)
T PRK08633 7 KIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLF 86 (1146)
T ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHH
Confidence 67899999999999999999999999887755444 566788888999999999999999999999999999988876
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHH
Q 007555 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (598)
Q Consensus 222 q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id 301 (598)
..+..++. .+..... + .+.+++..++.|....++.++....+ .| +++++ ++.++|+..+...
T Consensus 87 ~~~~~~~~----~~~~~~~----~--~~~l~~~r~l~G~~~~~~~~~~~~~i-~~----~~~~~---~r~~~~~~~~~~~ 148 (1146)
T PRK08633 87 EVGLTLLI----VLAYYLG----W--FWLAFAVTFLLGAQSAIYSPAKYGII-PE----LVGKE---NLSRANGLLEAFT 148 (1146)
T ss_pred HHHHHHHH----HHHHHHc----c--HHHHHHHHHHHHHHHHhhchHHHhhh-HH----hcCcc---cchhhhhHHHHHH
Confidence 54442221 1111111 1 24556666677777777777664433 34 55543 7899999999999
Q ss_pred HHHHHhhHHHHHHHHhh--------hchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCC
Q 007555 302 LLCEIAGASLFGILLSK--------YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVP 373 (598)
Q Consensus 302 ~~~~i~GP~lgGlL~s~--------~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~ 373 (598)
.++.++||+++|.+... .+.......... +...+..+ .+...+ ++.++.++.+ .+.
T Consensus 149 ~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~--~~~~~~~~~~--------~~~- 212 (1146)
T PRK08633 149 IVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVL--LAVAVLGL---IFAYRL--PKVPAAAPEV--------FDK- 212 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchHHHHHHH--HHHHHHHH---HHHhcC--cCCCCCCccc--------ccc-
Confidence 99999999999999875 221111111111 11111111 111111 2111100000 000
Q ss_pred CCccchhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChh-HHHHHHHHHHHHHHHHHHH
Q 007555 374 DADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPS-IIGGFSGLCASMGVAATFL 451 (598)
Q Consensus 374 ~~~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~-~iG~~~g~gavgGLlGtl~ 451 (598)
. .....++.++++++.+++|.++..+....+++.....+...++.|+. ..|+++. ..|++.+..++++++|+++
T Consensus 213 ~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~ 288 (1146)
T PRK08633 213 K----KYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLL 288 (1146)
T ss_pred c----ccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01234567788999999998776544433332221234445666766 4799998 9999999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH-hhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchh
Q 007555 452 SAYLVRRLGILKAGAAGLIFQASLLAMAVAVY-WSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANL 530 (598)
Q Consensus 452 ~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~-~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGR 530 (598)
.+++.+|.+..+...++.... .++...+ +..+ .+.++.+.++.+++..++....++++|+.+|++.||+
T Consensus 289 ~g~l~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~ 358 (1146)
T PRK08633 289 AGRLSGRHIELGLVPLGALGL----ALSLFLLPTAPS------LASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGK 358 (1146)
T ss_pred HHHHhCCceEccchhHHHHHH----HHHHHHHHHhhh------HHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhh
Confidence 999999987655443322211 1111111 1111 1111122233334444567788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 007555 531 IGTTEISVASLVESVMLGV 549 (598)
Q Consensus 531 V~sv~~sl~~~~~ll~~~~ 549 (598)
++|+.+++.++...++..+
T Consensus 359 ~~~~~~~~~~lg~~~~~~~ 377 (1146)
T PRK08633 359 VLAANNFLQNVGMLLFLAL 377 (1146)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 9999998888775444333
No 9
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.84 E-value=4e-17 Score=174.71 Aligned_cols=353 Identities=13% Similarity=0.016 Sum_probs=207.4
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHH
Q 007555 142 TPAHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNT 220 (598)
Q Consensus 142 ~~~r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~ 220 (598)
.+..++++..+.++++++.+|..+....+|+++.+.++ |...+++...+..++..+.+|+.|.++||++|||+++.+++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~ 89 (399)
T PRK05122 10 GLRLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLC 89 (399)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHH
Confidence 34456789999999999999999999999999988888 99999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHH
Q 007555 221 VQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI 300 (598)
Q Consensus 221 ~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~i 300 (598)
+..+... .+ ........ ......+.+++.-++.|+......++....+ .| ..++ ++..++++.....
T Consensus 90 ~~~~~~~---~~-~~~~~~~~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~-~~----~~~~---~~r~~~~~~~~~~ 156 (399)
T PRK05122 90 GCALSGL---LY-LLAGLLAA-WPVLSLLLLLLGRLLLGIGESLAGTGSILWG-IG----RVGA---LHTGRVISWNGIA 156 (399)
T ss_pred HHHHHHH---HH-HHhhhhhc-cchhHHHHHHHHHHHHHhhHHhhcchHHHHH-Hh----hcCh---hhhccchhhhhhh
Confidence 5433211 11 11111100 0000112344445566776666665554322 12 3443 3678999999888
Q ss_pred HHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchh
Q 007555 301 DLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVD 380 (598)
Q Consensus 301 d~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (598)
...+.++||.++|.+....|......+.. ...+... +...+ .| +. ++.+ ++ ..
T Consensus 157 ~~~g~~~g~~l~~~l~~~~g~~~~~~~~~---~~~~~~~----~~~~~--~~--~~-~~~~-----------~~----~~ 209 (399)
T PRK05122 157 TYGALAIGAPLGVLLYHWGGLAGLGLLIM---LLALLGL----LLARP--RP--AV-PPVK-----------GE----RL 209 (399)
T ss_pred hhHHHHHHHHHHHHHHHcccHHHHHHHHH---HHHHHHH----HHHhc--CC--CC-CCCC-----------cc----ch
Confidence 88999999999999998777433211111 1111100 11111 11 10 0000 00 01
Q ss_pred hhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007555 381 VGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (598)
Q Consensus 381 ~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg 460 (598)
+.++.++.+++.. ....+..+.. ......++.|..+.|++ ..+...+..++++++|.+..+++.+|+|
T Consensus 210 ----~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~ 277 (399)
T PRK05122 210 ----PFRRVLGRVWPYG-----MGLALASIGF-GTIATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLG 277 (399)
T ss_pred ----hHHHHHHHHHHHH-----HHHHHHHHHH-HHHHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1222222222211 1111111111 12233455566666764 3455567778888899999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHH
Q 007555 461 ILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS 540 (598)
Q Consensus 461 ~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~ 540 (598)
..+....+.... ..+........ + ...+ ..+.++..++............++.+|+++|||+.|+.++...
T Consensus 278 ~~~~~~~~~~~~----~~~~~~~~~~~--~-~~~~--~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 348 (399)
T PRK05122 278 GLRVAIVSLLVE----ILGLLLLWLAP--S-PWMA--LIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLD 348 (399)
T ss_pred cHHHHHHHHHHH----HHHHHHHHHhc--c-HHHH--HHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 776654433211 11211111111 1 1111 1122223333333334455667788999999999999998877
Q ss_pred HHH-HHHHHhhhhccC
Q 007555 541 LVE-SVMLGVAIIAND 555 (598)
Q Consensus 541 ~~~-ll~~~~~i~~~~ 555 (598)
... +.+.+.+.+.+.
T Consensus 349 ~g~~~~~~~~g~l~~~ 364 (399)
T PRK05122 349 LSLGITGPLAGLVASW 364 (399)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 664 455666666544
No 10
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.82 E-value=1e-16 Score=173.32 Aligned_cols=345 Identities=14% Similarity=0.019 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHH
Q 007555 150 YALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLL 228 (598)
Q Consensus 150 ~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~l 228 (598)
..++.+.++..+|..+..--+|.++....+ |...+|+...+..++.++++|++|.++||++||++++.+++...+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~- 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFA- 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHH-
Confidence 677899999999999988888888888778 999999999999999999999999999999999999988875443311
Q ss_pred HHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhh
Q 007555 229 SAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (598)
Q Consensus 229 s~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~G 308 (598)
.... .. + .+.+++..++.++....+.++.+..+ .| .+++ ++..++++..+..+.++..+|
T Consensus 92 -----~~~~-~~----~--~~~l~~~~~l~g~~~~~~~~~~~~~~-~~----~~~~---~~~~~a~~~~~~~~~~g~~ig 151 (400)
T PRK11646 92 -----TMAI-AH----E--PWLLWLSCILSGLGGTLFDPPRTALV-IK----LIRP---HQRGRFFSLLMMQDSAGAVIG 151 (400)
T ss_pred -----HHHH-hc----c--HHHHHHHHHHHHHHHHHHHHHHHHHH-HH----hcCH---HHHHHHHHHHHHHHHHHHHHH
Confidence 1111 11 1 23445555566666666666554433 23 4443 489999999999999999999
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHH
Q 007555 309 ASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKL 388 (598)
Q Consensus 309 P~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~e 388 (598)
|.++|.+. ..+......+.....+.. .+ ..... .|+ +++.+ . .++.++
T Consensus 152 ~~l~g~l~-~~g~~~~f~~~~~~~~~~---~i----~~~~~-~~~---~~~~~------------~--------~~~~~~ 199 (400)
T PRK11646 152 ALLGSWLL-QYDFRLVCATGAVLFVLA---AA----FNAWL-LPA---YKLST------------V--------RTPVRE 199 (400)
T ss_pred HHHHHHHH-HhhHHHHHHHHHHHHHHH---HH----HHHHh-CCc---ccccc------------c--------chhhHH
Confidence 99999998 455443233222111111 11 11111 111 00000 0 113456
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhhHHHHH
Q 007555 389 GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAY-LVRRLGILKAGAA 467 (598)
Q Consensus 389 G~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~-l~rrlg~~r~g~~ 467 (598)
+++.++++|.++........++.........++.|+++.+.++..+|.+.+..+++++.+.....+ ..||.+..+....
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 279 (400)
T PRK11646 200 GMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMA 279 (400)
T ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 788888888776533332222221112223455677776668889999988887777655544444 4456655443332
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHH
Q 007555 468 GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVM 546 (598)
Q Consensus 468 ~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~ 546 (598)
+.. +...+...+.... ....+ ....++..+|....+...+++.|+.+|++++|+++|..+....+.. ..+
T Consensus 280 ~~~----~~~~~~~~l~~~~---~~~~~--~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~ 350 (400)
T PRK11646 280 GLL----IMSLSMFPIGMVS---NLQQL--FTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGY 350 (400)
T ss_pred HHH----HHHHHHHHHHHhh---hHHHH--HHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcc
Confidence 221 1111111111111 11111 1111222234345566778999999999999999999998887775 455
Q ss_pred HHhhhhccCc
Q 007555 547 LGVAIIANDV 556 (598)
Q Consensus 547 ~~~~i~~~~~ 556 (598)
.+.|.+.+..
T Consensus 351 ~l~G~l~~~~ 360 (400)
T PRK11646 351 IGGGWLFDLG 360 (400)
T ss_pred cchHHHHHHH
Confidence 6667777664
No 11
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.81 E-value=7.1e-16 Score=165.87 Aligned_cols=359 Identities=14% Similarity=0.009 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHH
Q 007555 152 LYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAA 231 (598)
Q Consensus 152 L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~ 231 (598)
+..+++++..+..+....+|.+..+..-|....+....+..+...+.++++|.+.||++|||++..+.+.-.+. +.
T Consensus 18 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~----~~ 93 (406)
T PRK15402 18 LVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILT----CL 93 (406)
T ss_pred HHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH----HH
Confidence 56667777778888998888766554448888898888899999999999999999999999998876542221 11
Q ss_pred HHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHH
Q 007555 232 MIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASL 311 (598)
Q Consensus 232 ~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~l 311 (598)
...+ .. + .+.+++..++.|.......+.....+ .| ..++ ++..++++.......++.++||.+
T Consensus 94 ~~~~--~~-----~--~~~l~~~~~l~G~~~~~~~~~~~~~i-~~----~~~~---~~~~~~~~~~~~~~~~~~~~g~~i 156 (406)
T PRK15402 94 AILL--AQ-----S--IEQFTLLRFLQGIGLCFIGAVGYAAI-QE----SFEE---ADAIKITALMANVALLAPLLGPLV 156 (406)
T ss_pred HHHH--Hc-----c--HHHHHHHHHHHHhHhhhHHHHHHHHH-HH----HhCh---hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 11 1 23344444555555554444443333 23 2333 266788899888888889999999
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHH
Q 007555 312 FGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWK 391 (598)
Q Consensus 312 gGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~ 391 (598)
++.+....+......+..+..+.. .+ .....+ |+. ++.+ + + +...++.+++++
T Consensus 157 ~~~l~~~~~w~~~~~~~~~~~~~~---~~---~~~~~~--~~~---~~~~--------~---~-----~~~~~~~~~~~~ 209 (406)
T PRK15402 157 GAALIHVLPWRGMFVLFAALAALS---FF---GLWRAM--PET---AGRV--------G---E-----KLSLKELGRDYK 209 (406)
T ss_pred HHHHHHccCccHHHHHHHHHHHHH---HH---HHHHhC--CCC---Cccc--------c---c-----cccHHHHHHHHH
Confidence 999988777544333322221111 11 011111 211 1000 0 0 011345677888
Q ss_pred HHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 007555 392 EYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 470 (598)
Q Consensus 392 ~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~ 470 (598)
..+++|.++.......+.......+....+.|+. ..|+++.++|.......+++++|.++.+++.+|.+..+....+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~ 289 (406)
T PRK15402 210 LVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLW 289 (406)
T ss_pred HHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 8999997765333322221111233344566665 479999999998888888899999999999999988766544332
Q ss_pred HHHH-HHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHH
Q 007555 471 FQAS-LLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLG 548 (598)
Q Consensus 471 ~q~~-~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~ 548 (598)
.... .+..+....... ....+ +..++++..+|........++..+.. +++++||+++..+..+.+.. +++.+
T Consensus 290 ~~~~g~~~~~~~~~~~~----~~~~~-~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~ 363 (406)
T PRK15402 290 PMVAGLLLAALATVISS----HAYLW-LTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIEL 363 (406)
T ss_pred HHHHHHHHHHHHHHccc----ccHHH-HHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHH
Confidence 2111 111111110101 01111 12222223333333333444445543 55999999999999888775 55566
Q ss_pred hhhhccCcchhHHHHH
Q 007555 549 VAIIANDVSHFGFLAT 564 (598)
Q Consensus 549 ~~i~~~~~~~f~~l~l 564 (598)
.+.+.+..........
T Consensus 364 ~~~l~~~~~~~~~~~~ 379 (406)
T PRK15402 364 SKHAYLGGGNGLFNLF 379 (406)
T ss_pred HHhcccCCchHHHHHH
Confidence 6777777666654444
No 12
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.81 E-value=3.7e-16 Score=166.94 Aligned_cols=352 Identities=14% Similarity=0.070 Sum_probs=202.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCh-----hHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSL-----LPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLN 219 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~-----l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d 219 (598)
.+|++..+|.+++++.+++.++...+|.+..+..-|. ...+....+..+...+.+|+.|.++||++||++++.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 91 (408)
T PRK09874 12 WKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHH
Confidence 4567999999999999999999999999987643242 23577777888899999999999999999999998776
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHH
Q 007555 220 TVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNR 299 (598)
Q Consensus 220 ~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~ 299 (598)
+...+. ..+ ..... + .+.+++..++.+....+... ....+ .| ..++ ++..++|+....
T Consensus 92 ~~~~~~----~~~--~~~~~-----~--~~~~~~~~~~~g~~~~~~~~-~~~~~-~~----~~~~---~~~~~~~~~~~~ 149 (408)
T PRK09874 92 LGMGIV----MVL--MGLAQ-----N--IWQFLILRALLGLLGGFVPN-ANALI-AT----QVPR---NKSGWALGTLST 149 (408)
T ss_pred HHHHHH----HHH--HHHHh-----h--HHHHHHHHHHHHHhhhhHHh-HHHHH-HH----hcCH---hhhhHHHHHHHH
Confidence 543222 111 11111 1 23344444444444333322 22222 22 3333 367899999999
Q ss_pred HHHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccch
Q 007555 300 IDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIV 379 (598)
Q Consensus 300 id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (598)
...+..++||.++|.+....+......+..... +.... ..+. .+ ++. +++.++ ++
T Consensus 150 ~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~-~~~~--~~--~~~--~~~~~~----------~~----- 204 (408)
T PRK09874 150 GGVSGALLGPLAGGLLADSYGLRPVFFITASVL---FLCFL-VTLF--CI--REN--FQPVSK----------KE----- 204 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH---HHHHH-HHHH--Hh--ccC--cccccc----------hh-----
Confidence 999999999999999988766443333222111 11111 1011 11 100 000000 00
Q ss_pred hhhHHHHHHHHHHHhcCCch-HHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChh----HHHHHHHHHHHHHHHHHHHHHH
Q 007555 380 DVGIEAIKLGWKEYMQQPVL-PASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPS----IIGGFSGLCASMGVAATFLSAY 454 (598)
Q Consensus 380 ~~~~~~i~eG~~~~~~~pvl-l~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~----~iG~~~g~gavgGLlGtl~~~~ 454 (598)
..+.++.++. +++|.+ +..+...+++......+...++.|..+.+.+.. ..|.+.++.+++++++....++
T Consensus 205 ---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~ 280 (408)
T PRK09874 205 ---MLHMREVVTS-LKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGK 280 (408)
T ss_pred ---hhHHHHHHHh-CcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0122344553 445543 333332332222212344556667665433322 3566667777888888889999
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHH-HhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHH
Q 007555 455 LVRRLGILKAGAAGLIFQASLLAMAVAV-YWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGT 533 (598)
Q Consensus 455 l~rrlg~~r~g~~~l~~q~~~L~~~v~~-~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~s 533 (598)
+.+|+|..+....+..... .+... ....+ .... ....++..++...+....+++.|+.+|++.+||+++
T Consensus 281 l~dr~g~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 350 (408)
T PRK09874 281 LGDRIGPEKILITALIFSV----LLLIPMSFVQT---PLQL---GILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFS 350 (408)
T ss_pred HHhccccchhHHHHHHHHH----HHHHHHHHhcc---HHHH---HHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeeh
Confidence 9999998776654433221 11111 11111 1111 111122223333455667788899999999999999
Q ss_pred HHHHHHHHHH-HHHHHhhhhccCcc
Q 007555 534 TEISVASLVE-SVMLGVAIIANDVS 557 (598)
Q Consensus 534 v~~sl~~~~~-ll~~~~~i~~~~~~ 557 (598)
..++...+.. ..+.+.|.+.+..+
T Consensus 351 ~~~~~~~~g~~~gp~~~G~l~~~~g 375 (408)
T PRK09874 351 YNQSFRDIGNVTGPLMGAAISANYG 375 (408)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhhcc
Confidence 9999888775 44455566655443
No 13
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.81 E-value=1e-17 Score=173.80 Aligned_cols=345 Identities=17% Similarity=0.123 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHH
Q 007555 152 LYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSA 230 (598)
Q Consensus 152 L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~ 230 (598)
|+.+.+++.+++.+...++|+++.+..+ |...+++...+..++..+.+++.|.++||++|||+++.+.++..+. +
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~----~ 76 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG----S 76 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH----H
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH----H
Confidence 5789999999999999999987778888 9999999999999999999999999999999999999888764433 1
Q ss_pred HHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHH
Q 007555 231 AMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 310 (598)
Q Consensus 231 ~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~ 310 (598)
.+..+. . + .+.+++..++.|.......++....+ .| ..+++ +..++++..+....++.++||.
T Consensus 77 ~~~~~~--~-----~--~~~~~~~~~l~g~~~~~~~~~~~~~i-~~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~ 139 (352)
T PF07690_consen 77 LLLAFA--S-----N--FWLLLIARFLLGIGSGFFSPASNALI-AD----WFPPE---ERGRAFGILSAGFSLGSILGPL 139 (352)
T ss_dssp HHHHHH--C-----C--HHHHHHHHHHHHHHHHHHHHHHHHHH-HH----CCCTC---CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhh--h-----h--HHHHhhhccccccccccccccccccc-cc----cchhh---hhhhccccccchhhhhhhcccc
Confidence 111121 1 1 23455556677777777777665544 34 44443 7889999999999999999999
Q ss_pred HHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHH
Q 007555 311 LFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGW 390 (598)
Q Consensus 311 lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~ 390 (598)
++|.+....+......+.....+...+ ........+ +++++. + .+.++. +...++.++++
T Consensus 140 l~~~l~~~~~~~~~~~~~~~~~~~~~i------l~~~~~~~~--~~~~~~-~-------~~~~~~----~~~~~~~~~~~ 199 (352)
T PF07690_consen 140 LGGFLISYFGWRWAFLISAILSLIAAI------LFILFLPEP--PPPRER-E-------SPKESE----SKKPKPLKPGF 199 (352)
T ss_dssp HHHHCCCHCHHCCHHHHHHHHHHHHHH------HHHCCC-----STTTT----------SSTTTT------HHHCCCH-C
T ss_pred hhhhhhhccccccccccccchhhhhhh------hHhhhhhhc--cccccc-c-------cccccc----ccccccccccc
Confidence 999998766654333333222222111 000111011 000000 0 000000 01223334478
Q ss_pred HHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 007555 391 KEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLN-PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG 468 (598)
Q Consensus 391 ~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s-~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~ 468 (598)
+.++++|.++..+....+++.....+....+.|+. ..|++ +...|.+.+..+++++++.++.+++.+|++..+.....
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (352)
T PF07690_consen 200 KSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIA 279 (352)
T ss_dssp THHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 88888886652222222222121234556666744 57888 78999999999999999999999999998875554433
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH
Q 007555 469 LIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 543 (598)
Q Consensus 469 l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ 543 (598)
.... ............. ....+... ..++.+++....+.....+.|+.+|++++|++.|+.++..++..
T Consensus 280 ~~~~---~~~~~~~~~~~~~--~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 348 (352)
T PF07690_consen 280 ILLL---ILGALGLLLLPFS--SSPVWLII-ALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGG 348 (352)
T ss_dssp HHHH---HHHHHHHCCSHHH--CHHHHHHH-HHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHH---HHHHHHHHHHHHh--hhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 2211 1111111111100 00111111 22233344556688999999999999999999999998888764
No 14
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.79 E-value=2.1e-15 Score=161.43 Aligned_cols=352 Identities=14% Similarity=0.070 Sum_probs=206.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHH
Q 007555 144 AHPEGLYALYACCLAGNLVEQLWNFAWPSA--IALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNT 220 (598)
Q Consensus 144 ~r~r~f~~L~~gq~lS~~G~~i~~fAlpL~--v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~ 220 (598)
.|+++++.+++.-.++..+.....+..|.+ +....+ |....+....+..++.++.+++.|.++||++|||+++...+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~ 81 (394)
T PRK11652 2 KRQRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMS 81 (394)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHH
Confidence 477889999999998888887766665544 334455 99999999999999999999999999999999999887654
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHH
Q 007555 221 VQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI 300 (598)
Q Consensus 221 ~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~i 300 (598)
...+. .+..... + + .+.+++..++.|.......+.... +.+| ..++ +++.++|+..+..
T Consensus 82 ~~~~~------~~~~~~~-~----~--~~~l~~~~~~~g~~~~~~~~~~~~-~~~~----~~~~---~~~~~~~~~~~~~ 140 (394)
T PRK11652 82 IFILG------TLVALFA-H----S--LTVLIAASAIQGLGTGVGGVMART-LPRD----LYEG---TQLRHANSLLNMG 140 (394)
T ss_pred HHHHH------HHHHHHH-c----c--HHHHHHHHHHHHhhhhHHHHHHHH-HHHH----hcCH---HHHHHHHHHHHHH
Confidence 32211 1111111 1 1 133344444445443333333322 2233 2332 3788999999988
Q ss_pred HHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchh
Q 007555 301 DLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVD 380 (598)
Q Consensus 301 d~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (598)
..++.++||.++|.+....|......+.... .+...+ .....+ |+ +++.+ + +
T Consensus 141 ~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~---~~~~~~---~~~~~~--~~---~~~~~------------~-~---- 192 (394)
T PRK11652 141 ILVSPLLAPLIGGLLTTLFGWRACYLFLLLL---GAGVTF---SMARWM--PE---TRPAD------------A-R---- 192 (394)
T ss_pred HHHHHHHHHHHHHHHHhccChHHHHHHHHHH---HHHHHH---HHHHhC--Cc---cCccc------------c-c----
Confidence 8999999999999998876644323222111 111111 011111 11 01000 0 0
Q ss_pred hhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007555 381 VGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (598)
Q Consensus 381 ~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrl 459 (598)
.++.+++++..+++|.++..+......+.....+......|+.+ .|+++.+.|++.....++.++|+++.+++.+|.
T Consensus 193 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 270 (394)
T PRK11652 193 --RTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF 270 (394)
T ss_pred --hhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01256778888888877654433333332212334444556665 799999999999999999999999999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHH
Q 007555 460 GILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVA 539 (598)
Q Consensus 460 g~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~ 539 (598)
+ +....................+.... ..+.+..+.++..+|........++..|+..| +.+|++.++.++..
T Consensus 271 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 343 (394)
T PRK11652 271 S--TLMWQSVICCLLAGLLMWIPGWFGVM----NVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQ 343 (394)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHhccc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHH
Confidence 7 22222211110100000011111110 11112222223333444456677777888887 57899999998887
Q ss_pred HHHH-HHHHHhhhhc
Q 007555 540 SLVE-SVMLGVAIIA 553 (598)
Q Consensus 540 ~~~~-ll~~~~~i~~ 553 (598)
.+.. +.+.+.+.+.
T Consensus 344 ~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 344 NIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHHHcc
Confidence 6664 4445545443
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.79 E-value=5e-16 Score=167.56 Aligned_cols=366 Identities=12% Similarity=0.052 Sum_probs=216.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
+.+.+...|.+.+...++.....++.|.+.-+..-|....++...+..++.++.+|+.|.++||++||+++..+.+...+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~ 95 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSV 95 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 33457788999999888888888888876655544888999999999999999999999999999999999988765333
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
. ..+..+.. + .+.+++.-++.|.......+.....+ .| ..++ ++..++++.......+.
T Consensus 96 ~----~~~~~~~~-------~--~~~l~~~r~l~G~g~g~~~~~~~~~~-~~----~~~~---~~r~~~~~~~~~~~~lg 154 (426)
T PRK12307 96 G----TGLSGLAS-------G--VIMLTLSRFIVGMGMAGEYACASTYA-VE----SWPK---HLKSKASAFLVSGFGIG 154 (426)
T ss_pred H----HHHHHHHh-------H--HHHHHHHHHHHHHHHhhHHHHHHHHH-HH----hCCH---hHhhHhhhHHHHHHhHH
Confidence 2 11111211 1 13344444555554443333332222 23 3333 36789999998888888
Q ss_pred HHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHH
Q 007555 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (598)
Q Consensus 305 ~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (598)
.+++|.+++.+....+......+.+ ...+..+ +...+ .|+.++.++.+. ++ .. + ..+..++
T Consensus 155 ~~~~~~l~~~l~~~~~w~~~f~i~~----~~~~~~~---~~~~~--~p~~~~~~~~~~--~~---~~--~---~~~~~~~ 215 (426)
T PRK12307 155 NIIAAYFMPSFAEAYGWRAAFFVGL----LPVLLVI---YIRAR--APESKEWEEAKL--SG---KG--K---HSQSAWS 215 (426)
T ss_pred HHHHHHHHHHHcccCCHHHHHHHHH----HHHHHHH---HHHHH--CCCChHHHHhhh--hc---cc--c---ccccchh
Confidence 8899988888877666543333211 1111111 11111 121110000000 00 00 0 0012234
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHhhh---hhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007555 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVL---TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 461 (598)
Q Consensus 385 ~i~eG~~~~~~~pvll~~l~~~lL~~~vll---~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~ 461 (598)
+.+++++..+++|.++..+.....++.... .....++.|+.+.|+++...+...+..++++++|.++.+++.+|++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~ 295 (426)
T PRK12307 216 VFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGL 295 (426)
T ss_pred hhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 445677788888877654433222222111 13345666777889999999999999999999999999999999997
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHH
Q 007555 462 LKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL 541 (598)
Q Consensus 462 ~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~ 541 (598)
.+....+...... ........... ..........++.... ..++.....+.|+.+|++.||++.|+..++..+
T Consensus 296 ~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 368 (426)
T PRK12307 296 KKTFSIGLLMSFL---FIFPLFRIPQD-NYLLLGACLFGLMATN---VGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAAT 368 (426)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHccc-cHHHHHHHHHHHHHhc---ccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhH
Confidence 7655544322111 11111111110 0011111111111111 122334556789999999999999999888887
Q ss_pred HH-HHHHHhhhhccCcc
Q 007555 542 VE-SVMLGVAIIANDVS 557 (598)
Q Consensus 542 ~~-ll~~~~~i~~~~~~ 557 (598)
.. ..+.+.+.+.+..+
T Consensus 369 ~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 369 SGTFNSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHHHHHHHHccc
Confidence 75 44455566655544
No 16
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.79 E-value=1.9e-15 Score=162.97 Aligned_cols=373 Identities=10% Similarity=0.002 Sum_probs=215.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
-+|++...|.++++..+++.+...-+|.++.+..-|....+.......+...+.+|+.|.++||++|||++..+.++..+
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~ 90 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCV 90 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 46789999999999999999888778888755433999999999999999999999999999999999999888765333
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
. ..+... ..... .+ .+.+++.-++.|.......+.....+ .+ ..++ ++..++|+..+....++
T Consensus 91 ~----~~~~~~-~~~~~--~~--~~~l~~~~~i~G~g~~~~~~~~~~~~-~~----~~~~---~~~g~~~g~~~~~~~~g 153 (402)
T TIGR00897 91 G----HAAFIV-FGLGH--AN--YPLILLFYGIRGLGYPLFAYSFLVWV-VY----NTKQ---DNLSSAVGWFWAVYSIG 153 (402)
T ss_pred H----HHHHHH-HhccC--cc--HHHHHHHHHHHHcchHHHHhHHHHHH-HH----hCCH---HHHHHHHHHHHHHHHHH
Confidence 2 111111 11110 11 12333333333333222222222211 12 3333 47899999999998888
Q ss_pred H-HhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhH
Q 007555 305 E-IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (598)
Q Consensus 305 ~-i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (598)
. +.||.++|.++...|.....+..... ...... ..+.+.+ + +++++++ + + +.-+
T Consensus 154 ~~~~g~~~~~~l~~~~g~~~~~~~~~~~---~~~~~~-~~~~~~~---~---~~~~~~~-------~---~-----~~~~ 208 (402)
T TIGR00897 154 IGVFGSYYSSYAIPAFGEMNTLWSALAF---VLTGGV-IALFSNK---D---IFTPQHM-------Q---T-----REKF 208 (402)
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHHH---HHHHHH-HHHhccC---C---CCCcccc-------c---C-----Ccch
Confidence 6 78999999988766632222221111 011111 0011111 1 1011000 0 0 0113
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 007555 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (598)
Q Consensus 384 ~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r 463 (598)
++.+++++..+++|.++...............+....+.|.++.|+++.+.+.+.+...+++++|++..+++.+|++..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 288 (402)
T TIGR00897 209 SELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN 288 (402)
T ss_pred hhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 45667888899999876544332222211123444566788889999999999999999999999999999999998655
Q ss_pred HHHH-HHHHHHHHHHHHHHHH-hhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHH
Q 007555 464 AGAA-GLIFQASLLAMAVAVY-WSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL 541 (598)
Q Consensus 464 ~g~~-~l~~q~~~L~~~v~~~-~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~ 541 (598)
...+ +... +...+.... ...........+.. ..++..++...+ .+..+..++ +++++||++.|+.++...+
T Consensus 289 ~~~~~~~l~---~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~G~~~~~~-~~~~~~~~~-~~~~~~g~~~g~~~~~~~l 361 (402)
T TIGR00897 289 TVRWFGGVG---CGIFTLALYYIPQHFGHSFAVALI--IAIALGIFLAGY-VPLAAVFPT-LAPKHKGAAMSVLNLSAGL 361 (402)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHccCCcHHHHHH--HHHHHHHHHHHH-HHHHHHHHh-hCcchhHHHHHHHHHHHHH
Confidence 4321 1111 111111111 11000001111111 111122222222 334556666 4556899999999988887
Q ss_pred HH-HHHHHhhhhccCcchhHHHHHHH
Q 007555 542 VE-SVMLGVAIIANDVSHFGFLATLS 566 (598)
Q Consensus 542 ~~-ll~~~~~i~~~~~~~f~~l~l~S 566 (598)
.. ..+++.+.+.+...-.....+.+
T Consensus 362 g~~~gp~i~g~l~~~~g~~~~~~~~a 387 (402)
T TIGR00897 362 SAFLAPAIAVLFIGFFGAIGVVWIFA 387 (402)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHH
Confidence 75 55566677766544333333333
No 17
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.78 E-value=1e-15 Score=161.44 Aligned_cols=329 Identities=16% Similarity=0.032 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccC-----CchHH-HHHHHHHHHHHHHHHHHHHHHHh
Q 007555 164 QLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHS-----PRIPA-YICLNTVQAAAQLLSAAMIIHAH 237 (598)
Q Consensus 164 ~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~-----~Rr~v-mi~~d~~q~~~v~ls~~~l~~~~ 237 (598)
.+..+++|.+..+.--|..+++.+... .+|..+ +++.|.++||+ +|||. ++.+++...+. ...+.+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~----~~~l~~-- 76 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSL----LLILSF-- 76 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHH----HHHHHc--
Confidence 356678888877663399999999876 888876 99999999998 57775 56666543222 111111
Q ss_pred hhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Q 007555 238 TVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS 317 (598)
Q Consensus 238 ~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s 317 (598)
.. + .. ..+.++...++.+......+++.+.. ++..+++ ++..++|+.......+..++||.+++.+..
T Consensus 77 ~~-~-~~--~l~~l~~~~~~~~~~~~~~~~~~~a~-----~~~~~~~---~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~ 144 (356)
T TIGR00901 77 LV-P-ST--DLPLLAGLAFLIAFFSATQDIALDAW-----RLEILSD---EELGYGSTIYIVGYRAGMLLSGSLALVLAS 144 (356)
T ss_pred CC-c-ch--hHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhCCH---hhhchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11 1 11 12344555455566666666666543 3335554 378999999999999999999999999988
Q ss_pred hhc--------hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHH
Q 007555 318 KYE--------PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLG 389 (598)
Q Consensus 318 ~~~--------~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG 389 (598)
..+ ......+..... .+ .. +..... .++.+++++ +. ++..++.+++
T Consensus 145 ~~g~~~~~~~~wr~~f~i~ai~~---l~-~~---~~~~~~-~~e~~~~~~--------------~~----~~~~~~~~~~ 198 (356)
T TIGR00901 145 PEFANTGLITLWGYIFFWTALLI---LP-GL---LVTLFL-AKEPQEDAS--------------VP----KPLTQAVLKP 198 (356)
T ss_pred hcccccccccccHHHHHHHHHHH---HH-HH---HHHHHh-ccCCCcccc--------------cc----hhHHHHHHHH
Confidence 776 332222221111 11 11 111111 111110000 00 1113456778
Q ss_pred HHHHhcCCc---hHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhHHH
Q 007555 390 WKEYMQQPV---LPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCA-SMGVAATFLSAYLVRRLGILKAG 465 (598)
Q Consensus 390 ~~~~~~~pv---ll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~ga-vgGLlGtl~~~~l~rrlg~~r~g 465 (598)
++..+++|. +...+....++........+.++.|+.+.|+++.++|.+.++.+ +++++|.++.+++.+|+|..+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l 278 (356)
T TIGR00901 199 IREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL 278 (356)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 888888886 33322222222221123445677788789999999999888655 67889999999999999987765
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccc----chhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHH
Q 007555 466 AAGLIFQASLLAMAVAVYWSGSLSQ----QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS 540 (598)
Q Consensus 466 ~~~l~~q~~~L~~~v~~~~~g~~~~----~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~ 540 (598)
.++...+... .....+....... ....+......++..++....+....+++|+.+|+++|||++|+.+++.+
T Consensus 279 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 279 LLFGIVQALT--NAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHH--HHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 5443322111 1111111100000 00112222233334445557789999999999999999999999988765
No 18
>PRK12382 putative transporter; Provisional
Probab=99.77 E-value=4.1e-15 Score=159.05 Aligned_cols=351 Identities=12% Similarity=0.008 Sum_probs=204.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~ 223 (598)
.++.+..++.+++++.++..+..=.+|+++.+..+ |..++++...+..++..+.+|+.|.++||++|||+++.+.+...
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACG 92 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHH
Confidence 45678899999999999999998899999888778 99999999999999999999999999999999999998876533
Q ss_pred HHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHH
Q 007555 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (598)
Q Consensus 224 ~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~ 303 (598)
+..+. . ........ ......+.+++.-++.|+......++....+ .| .++++ +..++++..+.....
T Consensus 93 ~~~~~---~-~~~~~~~~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~-~~----~~~~~---~r~~a~~~~~~~~~~ 159 (392)
T PRK12382 93 LAGLA---Y-LLAAILPV-SAPFKFALLVVGRLILGFGESQLLTGALTWG-LG----LVGPK---HSGKVMSWNGMAMYG 159 (392)
T ss_pred HHHHH---H-Hhhhcccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh----hCCcc---ccchhhhHHHHHHHH
Confidence 22110 0 01000000 0000123344444556665555554443222 23 44443 688999999998999
Q ss_pred HHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhH
Q 007555 304 CEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (598)
Q Consensus 304 ~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (598)
+..+||.++|.+....|......+ .....++..+...+. + +.+++ + +.+ +
T Consensus 160 g~~~g~~~~~~l~~~~g~~~~~~~-------~~~~~~~~~~~~~~~--~---~~~~~-~-----------~~~---~--- 209 (392)
T PRK12382 160 ALAAGAPLGLLLHSHFGFAALALT-------TMVLPLLAWAFNGTV--R---KVPAH-A-----------GER---P--- 209 (392)
T ss_pred HHHHHHHHHHHHHhccChHHHHHH-------HHHHHHHHHHHHHhc--c---CCCCC-c-----------ccC---c---
Confidence 999999999999887764321111 111111110111111 1 10000 0 000 1
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 007555 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (598)
Q Consensus 384 ~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r 463 (598)
+.++.++.+++.. + ...+..+.. .......+.|+.+.|++. .|......+++++++.+..+++.+|+|..|
T Consensus 210 -~~~~~~~~~~~~~-~----~~~l~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 280 (392)
T PRK12382 210 -SLWSVVGLIWKPG-L----GLALQGVGF-AVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVK 280 (392)
T ss_pred -hHHHHHHHHHHhH-H----HHHHHHHHH-hHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 1223334333321 1 111111111 122334455666667654 455566777888889999999999999876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH
Q 007555 464 AGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 543 (598)
Q Consensus 464 ~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ 543 (598)
....+...... +........ +. .. ...+.++..++............++..|+++||+++|+.++...+..
T Consensus 281 ~~~~~~~~~~~----~~~~~~~~~--~~-~~--~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (392)
T PRK12382 281 VAIVSLLVETV----GLLLLWLAP--TA-WV--ALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAY 351 (392)
T ss_pred ehHHHHHHHHH----HHHHHHHcc--cH-HH--HHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 65544332211 111111111 11 11 11112222233223334556778888999999999999998877664
Q ss_pred -HHHHHhhhhccCc
Q 007555 544 -SVMLGVAIIANDV 556 (598)
Q Consensus 544 -ll~~~~~i~~~~~ 556 (598)
+.+.+.+.+.+..
T Consensus 352 ~ig~~~~g~l~~~~ 365 (392)
T PRK12382 352 GVSGPLAGMLATSF 365 (392)
T ss_pred HHHHHHHHHHHHHh
Confidence 5566667665543
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.77 E-value=1.8e-14 Score=155.45 Aligned_cols=334 Identities=12% Similarity=0.048 Sum_probs=197.7
Q ss_pred HHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHH
Q 007555 175 ALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFF 253 (598)
Q Consensus 175 ~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~v 253 (598)
.+..+ |...++....+..+...+.+|+.|.++||++|||+++.+.++..+. .. ...... + .+.+++
T Consensus 47 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~----~~--~~~~~~-----~--~~~l~~ 113 (394)
T PRK10213 47 AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLS----CL--LVSFAN-----S--FSLLLI 113 (394)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHH----HH--HHHHHC-----h--HHHHHH
Confidence 45566 8899999888889999999999999999999999999988764332 11 111111 1 245556
Q ss_pred HHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHH
Q 007555 254 VLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIM 333 (598)
Q Consensus 254 v~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~ 333 (598)
.-++.|.......+.....+ .| .+++ ++..++++.......++.++||.+++.+...+|......+...
T Consensus 114 ~r~l~G~~~g~~~~~~~~~i-~~----~~~~---~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~--- 182 (394)
T PRK10213 114 GRACLGLALGGFWAMSASLT-MR----LVPP---RTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAV--- 182 (394)
T ss_pred HHHHHHHhhHHHHHHHHHHH-HH----HcCH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH---
Confidence 55666666665555554433 34 3443 3789999999999999999999999999988776543333221
Q ss_pred HHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 007555 334 WSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVV 413 (598)
Q Consensus 334 ~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vl 413 (598)
..++..+ +...++ |+. +++. + .. .+.++..+++|.++..+....+.+...
T Consensus 183 l~~~~~l---~~~~~~--p~~--~~~~-------------~------~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~ 232 (394)
T PRK10213 183 MGVLCIF---WIIKSL--PSL--PGEP-------------S------HQ----KQNTFRLLQRPGVMAGMIAIFMSFAGQ 232 (394)
T ss_pred HHHHHHH---HHHHHC--CCC--Cccc-------------c------cc----hhHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 1111111 111111 211 0000 0 00 112334567776655433322222211
Q ss_pred hhhhHH-HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH-Hhhcccccc
Q 007555 414 LTPGSL-MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV-YWSGSLSQQ 491 (598)
Q Consensus 414 l~f~~l-~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~-~~~g~~~~~ 491 (598)
..+... .+.|..+.|+++...|......++++++|.++.+++.+|.+. +...+.... ........ .+..+
T Consensus 233 ~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~---~~~~~~~l~~~~~~---- 304 (394)
T PRK10213 233 FAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLV---LAVSALVLTLWGSD---- 304 (394)
T ss_pred HHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHH---HHHHHHHHHHHhhh----
Confidence 122223 344666689999999999999999999999999999998542 222221111 11111111 11111
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccCcchhHHHHHHHHHHH
Q 007555 492 NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIANDVSHFGFLATLSLLSV 570 (598)
Q Consensus 492 ~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~~~~f~~l~l~S~~~V 570 (598)
... .....++..++...++...++.+|+.+| ++++++.+...+..++.. +++.+.|.+.+..+........++..+
T Consensus 305 ~~~--~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~ 381 (394)
T PRK10213 305 KIV--ATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLML 381 (394)
T ss_pred HHH--HHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence 111 1112233344555678888889999998 568899988877777664 566666887765544444444444444
Q ss_pred HHH
Q 007555 571 VGA 573 (598)
Q Consensus 571 ~~a 573 (598)
..+
T Consensus 382 ~~~ 384 (394)
T PRK10213 382 LTA 384 (394)
T ss_pred HHH
Confidence 443
No 20
>PRK03545 putative arabinose transporter; Provisional
Probab=99.76 E-value=2.1e-14 Score=153.76 Aligned_cols=344 Identities=12% Similarity=0.011 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007555 162 VEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIP 241 (598)
Q Consensus 162 G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~ 241 (598)
++.+..-.+|.+..+..-|....+....+..+...+.+++.|.++||++|||++..+.++-.+ .+.+..+ ..
T Consensus 24 ~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~----~~~~~~~--~~-- 95 (390)
T PRK03545 24 TEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA----SHVLSAL--AW-- 95 (390)
T ss_pred HHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH----HHHHHHH--hc--
Confidence 333333335655444333999999999998999999999999999999999999887653222 1111111 11
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhch
Q 007555 242 TSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEP 321 (598)
Q Consensus 242 ~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~ 321 (598)
+ .+.+++.-++.|.......+.....+ .| ..++ ++..++++..+....++..+||.+++.+....|.
T Consensus 96 ---~--~~~l~~~r~~~G~~~~~~~~~~~~~i-~~----~~~~---~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw 162 (390)
T PRK03545 96 ---N--FTVLLISRIGIAFAHAIFWSITASLA-IR----VAPA---GKKAQALSLLATGTALAMVLGLPLGRVIGQYLGW 162 (390)
T ss_pred ---c--HHHHHHHHHHHHHHHHHHHHHHHHHH-HH----hCCh---hhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcH
Confidence 1 23445554555655554444433322 23 3443 3788999999999999999999999999988776
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHH
Q 007555 322 VTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA 401 (598)
Q Consensus 322 ~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~ 401 (598)
.....+.... +++... ...+. .|+. +++ + ++.. ..++.++++|.++.
T Consensus 163 ~~~f~~~~~~---~~l~~~----~~~~~-~~~~---~~~-------------~-----~~~~----~~~~~~~~~~~~~~ 209 (390)
T PRK03545 163 RTTFLAIGGG---ALITLL----LLIKL-LPLL---PSE-------------H-----SGSL----KSLPLLFRRPALVS 209 (390)
T ss_pred HHHHHHHHHH---HHHHHH----HHHHh-CCCC---CCC-------------C-----cchH----HHHHHHHhCcHHHH
Confidence 5443333221 111111 11111 1110 000 0 0011 12455778887665
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 007555 402 SLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAV 480 (598)
Q Consensus 402 ~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v 480 (598)
......+...........+++|+.+ .|+++...|.+.+..++++++|++..+++.+|.+..+ ...+... ...+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-~~~~~~~----~~~~~ 284 (390)
T PRK03545 210 LYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF-LLIAIAL----LLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHH----HHHHH
Confidence 4333322221111223345666665 6999999999999999999999999999999987533 2222111 11111
Q ss_pred HHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccCcchh
Q 007555 481 AVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIANDVSHF 559 (598)
Q Consensus 481 ~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~~~~f 559 (598)
........ .... +....++..++...+....+..+|+..| +.+||++|..+++.++.. .++.+.|.+.+.....
T Consensus 285 ~~l~~~~~--~~~~--~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~ 359 (390)
T PRK03545 285 LLLLPAAN--SEWH--LSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLS 359 (390)
T ss_pred HHHHHHhc--hHHH--HHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChh
Confidence 11111110 1111 1112222223333344556677887766 588999999988877654 5556667776554444
Q ss_pred HHHHHHHHHH
Q 007555 560 GFLATLSLLS 569 (598)
Q Consensus 560 ~~l~l~S~~~ 569 (598)
..........
T Consensus 360 ~~~~~~~~~~ 369 (390)
T PRK03545 360 SIGYVGAALA 369 (390)
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 21
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.76 E-value=1e-14 Score=157.21 Aligned_cols=385 Identities=14% Similarity=0.062 Sum_probs=218.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccC-----Cch-HHHHHHHHHH
Q 007555 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHS-----PRI-PAYICLNTVQ 222 (598)
Q Consensus 149 f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~-----~Rr-~vmi~~d~~q 222 (598)
|..||..|. +.......++|.|+-+.--|...+|+.... .+| .++.|+.|.++||+ +|| ++++.+++..
T Consensus 4 ~~~l~~~~~---~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~-~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~ 78 (402)
T PRK11902 4 MLLLGFASG---LPLALTSGTLQAWMTVEGLDIQTIGFFSLV-GQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGL 78 (402)
T ss_pred HHHHHHHHh---hhHHHHHHHHHHHHHHcCCCHHHHHHHHHH-HHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHH
Confidence 556666665 456788899999999873399999999665 456 58999999999999 455 5788887654
Q ss_pred HHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHH
Q 007555 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (598)
Q Consensus 223 ~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~ 302 (598)
.++ ...+.+ .++ ..+ .+.+++..++.+......+++.+..+ +..+++ ++..++|+.......
T Consensus 79 ~l~----~~~l~~---~~~-~~~--~~~l~~~~~~~~~~~~~~~~~~~al~-----~~~~~~---~~r~~~~~~~~~g~~ 140 (402)
T PRK11902 79 AAS----IAAMAF---CPP-HAA--LWPLAGLAVLVAFLSASQDIVFDAYS-----TDVLHP---EERGAGAAVKVLGYR 140 (402)
T ss_pred HHH----HHHHHh---cCc-cch--HHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhcCh---hhhhHHHHHHHHHHH
Confidence 332 111111 111 111 23445554555666666666665433 224444 378999999999999
Q ss_pred HHHHhhHHHHHHHHhh-hchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhh
Q 007555 303 LCEIAGASLFGILLSK-YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDV 381 (598)
Q Consensus 303 ~~~i~GP~lgGlL~s~-~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (598)
++.++|+.+++.+.+. .|......+..... ....+ ....+ +++++++++ + ++
T Consensus 141 ~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~---l~~~l----~~~~~--~e~~~~~~~-------------~-----~~ 193 (402)
T PRK11902 141 LAMLVSGGLALWLADRVLGWGNTYLLMAGLM---LAGAL----TTLWA--PEPEVPARP-------------P-----RS 193 (402)
T ss_pred HHHHHHhHHHHHHHhcccCHHHHHHHHHHHH---HHHHH----HHHhc--CCCcccccc-------------c-----ch
Confidence 9999999999999884 46544333322211 11111 11111 211111000 0 11
Q ss_pred hHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHH-HHHHHHHHHHHHHHHHhh
Q 007555 382 GIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLC-ASMGVAATFLSAYLVRRL 459 (598)
Q Consensus 382 ~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~g-avgGLlGtl~~~~l~rrl 459 (598)
..++.+++++.+++||.++..+....++...........++|+. +.|+++..+|++.+.. .+++++|.++.+++.+|+
T Consensus 194 ~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~ 273 (402)
T PRK11902 194 LGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL 273 (402)
T ss_pred hHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 22356788999999998877555444432211122234444444 5899999999998664 456899999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHH--HHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHH
Q 007555 460 GILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCL--IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEIS 537 (598)
Q Consensus 460 g~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~--i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~s 537 (598)
|..+....+...+.... .......... +....++.... .+...++........+.+.|+..|.+.+|+.+++. +
T Consensus 274 g~~~~l~~~~~~~~l~~-l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 349 (402)
T PRK11902 274 GLYRSLMLFGVLQAVSN-LGYWVLAVTP--KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALA-S 349 (402)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH-H
Confidence 98776544332221111 0110001111 01111111111 12334445566888889999999988877655543 3
Q ss_pred HHHHHHHHHHHhhhhccCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcccccCCC
Q 007555 538 VASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQ 597 (598)
Q Consensus 538 l~~~~~ll~~~~~i~~~~~~~f~~l~l~S~~~V~~a~~l~~~~l~~~~~~~~~l~~~~~~ 597 (598)
+.... .+.+.|.+. +.+++.......++.+...+...| +. ++|+.+||.+
T Consensus 350 l~~~~--~~~~~G~l~---~~~G~~~~f~~~~~~~~~~~~~~~--~~---~~~~~~~~~~ 399 (402)
T PRK11902 350 VGRVY--VGPTSGYLV---EAYGWPGFYLMTVVIALPGLALLW--LM---RGTIGRYEAQ 399 (402)
T ss_pred HHHHH--HHHHHHHHH---HHhChHHHHHHHHHHHHHHHHHHH--HH---hhhccccccc
Confidence 43332 344445444 445555433333333322222222 11 4456667754
No 22
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.76 E-value=1.8e-14 Score=152.51 Aligned_cols=331 Identities=13% Similarity=0.059 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007555 159 GNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHT 238 (598)
Q Consensus 159 S~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~ 238 (598)
..++..++.-.+|.+..+..-|....+....+..++..+.+++.|.++||++||+++..+.++..+. +.+..+ .
T Consensus 3 ~~~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~----~~~~~~--~ 76 (377)
T PRK11102 3 MPLAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALA----AVACAL--A 76 (377)
T ss_pred cchHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHH----HHHHHH--H
Confidence 3466778888888888765449999999999999999999999999999999999998776543322 111111 1
Q ss_pred hccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhh
Q 007555 239 VIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK 318 (598)
Q Consensus 239 ~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~ 318 (598)
. + .+.+++..++.|.......+.....+ .| ..++ ++..++++.......++.++||.++|.+...
T Consensus 77 ~-----~--~~~~~~~~~l~g~~~~~~~~~~~~~~-~~----~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 141 (377)
T PRK11102 77 Q-----T--IDQLIYMRFLHGLAAAAASVVINALM-RD----MFPK---EEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW 141 (377)
T ss_pred c-----c--HHHHHHHHHHHHHHHHHHHHHHHHHH-HH----hcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 13344444455555554444443322 23 4443 3788999999999999999999999999887
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCc
Q 007555 319 YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV 398 (598)
Q Consensus 319 ~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pv 398 (598)
.+......+..... .+..+ +....+ ++. +++++ + +. ...++..+.++..+++|.
T Consensus 142 ~~~~~~~~~~~~~~---~~~~~---~~~~~~--~~~--~~~~~---------~--~~-----~~~~~~~~~~~~~~~~~~ 195 (377)
T PRK11102 142 FSWHAIFWVLALAA---ILAAA---LVFFFI--PET--LPKER---------R--QP-----FHLRTTIRNFASLFRHKR 195 (377)
T ss_pred cChHHHHHHHHHHH---HHHHH---HHHHhC--Ccc--Ccccc---------c--CC-----CChHHHHHHHHHHHcChH
Confidence 66443222221111 11111 111111 111 00000 0 00 011223345566777876
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 007555 399 LPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLA 477 (598)
Q Consensus 399 ll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~ 477 (598)
+...+....+.+.....+....+.|.. ..|+++.+.|.+.+..+++++++.+..+++.+|+|..+....+...+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~--- 272 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFI--- 272 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH---
Confidence 654333332222211112222233343 4799999999999999999999999999999999987766554432221
Q ss_pred HHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH
Q 007555 478 MAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 542 (598)
Q Consensus 478 ~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~ 542 (598)
.++.....+... ...+....+......+..........+.|+..| +.+|+++++.+++....
T Consensus 273 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~ 334 (377)
T PRK11102 273 MGIWLVVSALLD--LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGI 334 (377)
T ss_pred HHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHH
Confidence 111111111000 011111111111111222233344566787766 89999999988776544
No 23
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.75 E-value=3.8e-15 Score=157.80 Aligned_cols=375 Identities=11% Similarity=0.039 Sum_probs=209.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHH
Q 007555 144 AHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (598)
Q Consensus 144 ~r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~ 223 (598)
.+.+.+...+.+++.+.++..+..+..|.+..+..-|....+.......+...+.+|+.|.++||++||++++.+.+...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~ 88 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFS 88 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34467888999999999999999999998765544499999999999999999999999999999999999987765432
Q ss_pred HHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHH
Q 007555 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (598)
Q Consensus 224 ~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~ 303 (598)
+. +.+..+ .. + .+.+++..++.|.......+.....+ .| ..++ ++..++++..+....+
T Consensus 89 ~~----~~~~~~--~~-----~--~~~l~~~~~l~G~~~~~~~~~~~~~i-~~----~~~~---~~~~~~~~~~~~~~~~ 147 (405)
T TIGR00891 89 AG----TLACGF--AP-----G--YITMFIARLVIGIGMGGEYGSSAAYV-IE----SWPK---HLRNKASGLLISGYAV 147 (405)
T ss_pred HH----HHHHHH--hc-----c--HHHHHHHHHHHHhhhhhhhHHHHHHH-HH----hCCh---hhhhHHHHHHHHHHHH
Confidence 22 111111 11 1 23455555566665555554443322 23 3333 3788999999999999
Q ss_pred HHHhhHHHHHHHHhhhc--hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCC--CCCCccch
Q 007555 304 CEIAGASLFGILLSKYE--PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGP--VPDADNIV 379 (598)
Q Consensus 304 ~~i~GP~lgGlL~s~~~--~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~ 379 (598)
+.++||.+++.+....+ ......+. +......+ +...++ |+.++.++.++..++.++.. ..+.++..
T Consensus 148 g~~~~~~l~~~l~~~~~~~w~~~f~~~----~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (405)
T TIGR00891 148 GAVVAAQVYSLVVPVWGDGWRALFFIS----ILPIIFAL---WLRKNI--PEAEDWKEKHAGKALVRTMVDILYGGEHRI 218 (405)
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHH----HHHHHHHH---HHHHhC--CCChhHHHHhhhhhhhhhHHHHHhccchhh
Confidence 99999999999987665 22212111 11111111 111222 22111000000000000000 00000000
Q ss_pred hhhHHHHHHHHHHHhcCCc--hHHHHHHHH-HHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 007555 380 DVGIEAIKLGWKEYMQQPV--LPASLAYVL-LCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYL 455 (598)
Q Consensus 380 ~~~~~~i~eG~~~~~~~pv--ll~~l~~~l-L~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l 455 (598)
+...++....++...+++. +...+.... .++.. ......++.|+. +.|+++.+.|.+.+..++++++|.++.+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 297 (405)
T TIGR00891 219 ANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYS-HPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFL 297 (405)
T ss_pred hhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001111111111111111 111111111 11111 123345666776 479999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHH
Q 007555 456 VRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTE 535 (598)
Q Consensus 456 ~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~ 535 (598)
.+|+|..+....+..... ......+.... ....+.+. .....+...........++|+.+|+++||+++|+.
T Consensus 298 ~dr~g~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 369 (405)
T TIGR00891 298 GDWLGRRKAYVCSLLAGQ---LLIIPVFAIGA---NVAVLGLG--LFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFT 369 (405)
T ss_pred HHHhCchhhhHHHHHHHH---HHHHHHHHhCC---chHHHHHH--HHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHH
Confidence 999998766544332111 11111111111 11111111 11111111112234456789999999999999999
Q ss_pred HHHHHHHH-HHHHHhhhhccCcc
Q 007555 536 ISVASLVE-SVMLGVAIIANDVS 557 (598)
Q Consensus 536 ~sl~~~~~-ll~~~~~i~~~~~~ 557 (598)
+++.++.. +.+.+.|.+.+..+
T Consensus 370 ~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 370 YQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Confidence 98888764 55566677766544
No 24
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.75 E-value=1.9e-14 Score=154.19 Aligned_cols=379 Identities=12% Similarity=-0.049 Sum_probs=215.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHH
Q 007555 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (598)
Q Consensus 148 ~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ 227 (598)
.+...+...++..+.......+.|.+.-+..-|...++....+..+..++.+++.|.+.||++|||++..+.++..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~-- 93 (406)
T PRK11551 16 TIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLF-- 93 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH--
Confidence 456677788888888888899999887665449999999999999999999999999999999999988776432221
Q ss_pred HHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHh
Q 007555 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (598)
Q Consensus 228 ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~ 307 (598)
.. ...... + .+.+++..++.|.......+.....+ .| ..++ ++..++++.......+..++
T Consensus 94 --~~--~~~~~~-----~--~~~~~~~~~l~G~~~~~~~~~~~~~~-~~----~~~~---~~r~~~~~~~~~~~~~g~~~ 154 (406)
T PRK11551 94 --SL--ATAQAW-----D--FPSLLVARLLTGVGLGGALPNLIALT-SE----AVGP---RLRGTAVSLMYCGVPFGGAL 154 (406)
T ss_pred --HH--HHHHhc-----c--HHHHHHHHHHHHhhHHHHHHHHHHHH-HH----HcCH---HHHHHHHHHHHHHHHHHHHH
Confidence 11 111111 1 23344444555555444444333222 23 3333 37889999999999999999
Q ss_pred hHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHH
Q 007555 308 GASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIK 387 (598)
Q Consensus 308 GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 387 (598)
+|.+++.+....+......+... ..+.... .....+ |+.++.+++++ . ++. .+...+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~l--~~~~~~~~~~~--------~-~~~---~~~~~~~~- 213 (406)
T PRK11551 155 ASVIGVLAAGDAAWRHIFYVGGV---GPLLLVP---LLMRWL--PESRAFAQAAG--------A-GKQ---RAPVLRAL- 213 (406)
T ss_pred HHHHHHHHccccCHHHHHHHHHH---HHHHHHH---HHHHhC--CCChhHHhccC--------c-chh---hhhhHHHH-
Confidence 99999888776554432222211 1111111 111111 21111000000 0 000 01111111
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 007555 388 LGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA 467 (598)
Q Consensus 388 eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~ 467 (598)
++.. +.+..+.........+.....+...++.|+.+.|+++...|...+...+++++|.++.+++.+|+|..+....
T Consensus 214 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 290 (406)
T PRK11551 214 --FGEG-RATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLL 290 (406)
T ss_pred --hhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 1100 1111111111111111111122334566777889999999999999999999999999999999998766543
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHH
Q 007555 468 GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVM 546 (598)
Q Consensus 468 ~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~ 546 (598)
+.... ..+...+.... ...... + ..++..++..........+.|+.+|+++||++.|+.++...+.. ..+
T Consensus 291 ~~~~~----~~~~~~~~~~~--~~~~~~--~-~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~ 361 (406)
T PRK11551 291 IYAGI----LASLAALAAAP--SFAGML--L-AGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGP 361 (406)
T ss_pred HHHHH----HHHHHHHHhcC--cHHHHH--H-HHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHh
Confidence 32211 11111111111 111111 1 11122222223455667889999999999999999999988875 555
Q ss_pred HHhhhhccCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007555 547 LGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHW 580 (598)
Q Consensus 547 ~~~~i~~~~~~~f~~l~l~S~~~V~~a~~l~~~~ 580 (598)
.+.|.+.+..................+..+....
T Consensus 362 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 362 LLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 6667777655555545444444444444444443
No 25
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.74 E-value=7.8e-14 Score=147.22 Aligned_cols=345 Identities=14% Similarity=0.045 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHH
Q 007555 152 LYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAA 231 (598)
Q Consensus 152 L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~ 231 (598)
+..-.++..++..++.-++|.+..+..-|....+.......+..++.+++.|.++||++||+++..+.+...+. ..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~ 85 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS----SL 85 (385)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH----HH
Confidence 33444666788888888888877666559999999999999999999999999999999999998776532221 11
Q ss_pred HHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHH
Q 007555 232 MIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASL 311 (598)
Q Consensus 232 ~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~l 311 (598)
...+ .. + .+.+++..++.|.......++....+ .| ..++ ++..++++..+....+...+||.+
T Consensus 86 ~~~~--~~-----~--~~~~~~~~~l~g~~~~~~~~~~~~~~-~~----~~~~---~~~~~~~~~~~~~~~~g~~~g~~~ 148 (385)
T TIGR00710 86 GLAL--SN-----N--IETLLVLRFVQAFGASAGSVISQALV-RD----IYPG---EELSRIYSILMPVLALAPAVAPLL 148 (385)
T ss_pred HHHH--Hc-----c--HHHHHHHHHHHHcchhHHHHHHHHHH-HH----hcCc---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 11 1 23344444555555555555443322 34 3343 378899999999999999999999
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHH
Q 007555 312 FGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWK 391 (598)
Q Consensus 312 gGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~ 391 (598)
+|.+....+......+..... +.... ..... .|+. ++.+ + ++ ..++..+.++
T Consensus 149 ~~~l~~~~~~~~~~~~~~~~~---~~~~~---~~~~~--~~~~---~~~~--------~--~~-------~~~~~~~~~~ 200 (385)
T TIGR00710 149 GGYILVWLSWHAIFAFLSLAG---ILLSA---LIFFI--LPET---LPYE--------A--RI-------QISTYFETFL 200 (385)
T ss_pred HHHHHHHcCHHHHHHHHHHHH---HHHHH---HHHHh--CCCC---CCCc--------c--cC-------CHHHHHHHHH
Confidence 999988776543222221111 11111 11111 1111 1000 0 00 0122344566
Q ss_pred HHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 007555 392 EYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 470 (598)
Q Consensus 392 ~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~ 470 (598)
..+++|.++.......+.+.....+....+.|+. +.|+++...|.+.+..++++++|.++.+++.+|++..+...++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~ 280 (385)
T TIGR00710 201 LLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLI 280 (385)
T ss_pred HHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 6778887665433322222211122333444555 579999999999999999999999999999999988766554332
Q ss_pred HHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHh
Q 007555 471 FQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGV 549 (598)
Q Consensus 471 ~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~ 549 (598)
...... +........ .......+........+|.............+..| +++|+++++.++...... ..+...
T Consensus 281 ~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~ 355 (385)
T TIGR00710 281 LFAVSA---VLLEITAIL-GLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLV 355 (385)
T ss_pred HHHHHH---HHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 211111 111111100 00011111112222223333333444455555555 689999999998887652 444555
Q ss_pred h
Q 007555 550 A 550 (598)
Q Consensus 550 ~ 550 (598)
+
T Consensus 356 ~ 356 (385)
T TIGR00710 356 S 356 (385)
T ss_pred H
Confidence 5
No 26
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.74 E-value=8.4e-15 Score=152.98 Aligned_cols=372 Identities=16% Similarity=0.066 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007555 159 GNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHT 238 (598)
Q Consensus 159 S~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~ 238 (598)
..+...+..++.|.+.-+..-|....+....+..+..++.+|+.|.++||++||+++..+.++..+. .. .....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~--~~~~~ 79 (399)
T TIGR00893 6 NYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVF----TG--LQAFA 79 (399)
T ss_pred HHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHH----HH--HHHHH
Confidence 3344467777888855444339999999999999999999999999999999999988776543222 11 11111
Q ss_pred hccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhh
Q 007555 239 VIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK 318 (598)
Q Consensus 239 ~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~ 318 (598)
. + .+.+++..++.|.......++....+ .| ..++ ++..++++..+....+..++||.++|.+...
T Consensus 80 ~-----~--~~~~~~~~~l~g~~~~~~~~~~~~~~-~~----~~~~---~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 144 (399)
T TIGR00893 80 G-----A--YVSLYILRVLLGAAEAPFFPGIILIV-AS----WFPA---SERATAVSIFNSAQGLGGIIGGPLVGWILIH 144 (399)
T ss_pred c-----C--HHHHHHHHHHHHHHHHhhhhHHHHHH-HH----hCCH---HHHHHHHHHHHHhchHHHHHHHHHHHHHHHh
Confidence 1 1 23445555556665555555443322 23 4443 3788999999999999999999999998887
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCC-CCCCCCCCccchhhhHHHHHHHHHHHhcCC
Q 007555 319 YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTS-NEGPVPDADNIVDVGIEAIKLGWKEYMQQP 397 (598)
Q Consensus 319 ~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~eG~~~~~~~p 397 (598)
.+......+.... .+...++. +... ++.+++++..+++.++. .+....+.+. +...++..+.++..+++|
T Consensus 145 ~~~~~~~~~~~~~---~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 215 (399)
T TIGR00893 145 FSWQWAFIIEGVL---GIIWGVLW-LKFI---PDPPQKAKWLTEEEKYIVVGGLLAEQQG--KGPSTPKKYQIKELLKDR 215 (399)
T ss_pred CCchHHHHHHHHH---HHHHHHHh-hhee---cCCCCccccCCHHHHhhcchhhcccccc--ccccCCCccchHHHhcCH
Confidence 6644322222111 11111110 1111 11011100000000000 0000000000 000001122345566777
Q ss_pred chHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH--HHHHHHH
Q 007555 398 VLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA--GLIFQAS 474 (598)
Q Consensus 398 vll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~--~l~~q~~ 474 (598)
.++.......++......+...++.|+.+ .|+++...|...+..++++++|.++.+++.+|++..+.... .......
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
T TIGR00893 216 RVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIA 295 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Confidence 66554433333322223444556667764 79999999999999999999999999999998886541111 0010011
Q ss_pred HHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhc
Q 007555 475 LLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIA 553 (598)
Q Consensus 475 ~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~ 553 (598)
.+..+...+..... . ..+...........+. .+.....++.++.+|+++||+++|+.++..++.. +.+.+.+.+.
T Consensus 296 ~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~ 371 (399)
T TIGR00893 296 GLVLSLLMFATNYV--N-IPYAALALVALGFFGL-GAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIA 371 (399)
T ss_pred HHHHHHHHHHhccc--h-hHHHHHHHHHHHHhch-hhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhc
Confidence 11112122211111 0 1111111111122222 2567788999999999999999999999988775 5556667776
Q ss_pred cCcchhHHHHH
Q 007555 554 NDVSHFGFLAT 564 (598)
Q Consensus 554 ~~~~~f~~l~l 564 (598)
+....+....+
T Consensus 372 ~~~g~~~~~~~ 382 (399)
T TIGR00893 372 ATTGSFAGALM 382 (399)
T ss_pred cCCCchhHHHH
Confidence 66553444433
No 27
>PRK10054 putative transporter; Provisional
Probab=99.73 E-value=2.4e-14 Score=154.47 Aligned_cols=367 Identities=12% Similarity=0.008 Sum_probs=212.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~ 223 (598)
++|+++.+.++.++..+|..+..--+|.++.+..+ |...++....+..+..++.+|++|.+.||++||++++.+.+...
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~ 84 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFA 84 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHH
Confidence 45779999999999999999999999999988888 99999999999899999999999999999999999887765432
Q ss_pred HHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHH
Q 007555 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (598)
Q Consensus 224 ~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~ 303 (598)
+. +.+..+. . + .+.+++...+.++....+.++.+. |+...+++ ++..++++..+....+
T Consensus 85 ~~----~~~~~~~--~-----~--~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~---~~~~~~~g~~~~~~~l 143 (395)
T PRK10054 85 SG----FIAIPLV--N-----N--VTLVVLFFALINCAYSVFSTVLKA-----WFADNLSS---TSKTKIFSLNYTMLNI 143 (395)
T ss_pred HH----HHHHHHH--h-----H--HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHhcCH---hHHHHHHHHHHHHHHH
Confidence 22 1111121 1 1 122333333344433333333322 33335553 3788999999999999
Q ss_pred HHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhH
Q 007555 304 CEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (598)
Q Consensus 304 ~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (598)
...+||.++|.++. .+......+.....+.. .++..+.+.+ ++++++ + ++ ++.+
T Consensus 144 g~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~---~i~~~~~~~~--------~~~~~~-------~--~~-----~~~~ 197 (395)
T PRK10054 144 GWTVGPPLGTLLVM-QSINLPFWLAAICSAFP---LVFIQIWVQR--------SEKAIA-------T--ET-----GSVW 197 (395)
T ss_pred HHHHHHHHHHHHHH-hccCcHHHHHHHHHHHH---HHHHHHHHhc--------cccccc-------c--ch-----hhhh
Confidence 99999999999886 45433222222111111 1111011111 111000 0 00 0101
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHH---HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007555 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL---TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (598)
Q Consensus 384 ~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl---~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg 460 (598)
..+..+++|.++.......+.......+....+.|+ .+.+.++..+|.+....+++.+...+..+++.+|.+
T Consensus 198 -----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 272 (395)
T PRK10054 198 -----SPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAAN 272 (395)
T ss_pred -----hhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCC
Confidence 124567777766543332221111112222333444 345777888899988888877777777788877777
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHH
Q 007555 461 ILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS 540 (598)
Q Consensus 461 ~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~ 540 (598)
..+...++.... ..+...+.... . .........++..+|..........++++.+|++++|+.+++.+...-
T Consensus 273 ~~~~l~~~~~~~----~~~~~~~~~~~--~--~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~ 344 (395)
T PRK10054 273 IRPLMTAGTLCF----VIGLVGFIFSG--N--SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWL 344 (395)
T ss_pred chhHHHHHHHHH----HHHHHHHHHcc--h--HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHHHHHH
Confidence 655444332211 11211111110 0 111111122333444434344556789999999999999997663333
Q ss_pred HHHHHHHHhhhhccCcchhHHHHHHHHHHHH
Q 007555 541 LVESVMLGVAIIANDVSHFGFLATLSLLSVV 571 (598)
Q Consensus 541 ~~~ll~~~~~i~~~~~~~f~~l~l~S~~~V~ 571 (598)
+..+++.+.|.+.+.........+......+
T Consensus 345 G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~ 375 (395)
T PRK10054 345 GAAINPLVSGVILTTLPPWSLFVILALAIVA 375 (395)
T ss_pred HHHHHHHHHHHHHHHcChhhHHHHHHHHHHH
Confidence 3446777778887765544444443333333
No 28
>PRK11043 putative transporter; Provisional
Probab=99.72 E-value=3.7e-13 Score=144.43 Aligned_cols=349 Identities=12% Similarity=-0.017 Sum_probs=193.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 149 LYALYACCLAGNLVEQLWNFAWPSA--IALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 149 f~~L~~gq~lS~~G~~i~~fAlpL~--v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
+..+.....++.++.-.+..-.|.+ +.+..+ |....+....+..++..+.+++.|.++||++||+++..+.+...+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG 84 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH
Confidence 4555566666777777777777766 445556 9999999999999999999999999999999999998776532211
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~ 305 (598)
+.+..+ .. + .+.+++..++.|.......+..+ ++..|| .++ ++..++++....+..++.
T Consensus 85 ----~~~~~~--~~-----~--~~~l~~~~~l~G~~~~~~~~~~~-~~~~~~----~~~---~~~~~~~~~~~~~~~~~~ 143 (401)
T PRK11043 85 ----SLGMLW--VE-----S--AAQLLVLRFVQAVGVCSAAVIWQ-ALVIDR----YPA---QKANRVFATIMPLVALSP 143 (401)
T ss_pred ----HHHHHH--hc-----C--HHHHHHHHHHHHhhhHHHHHHHH-HHHHHh----cCc---HHHHHHHHHHHHHHHHHH
Confidence 111111 11 1 23334433444433222222222 222342 333 267788888888888999
Q ss_pred HhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHH
Q 007555 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEA 385 (598)
Q Consensus 306 i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (598)
.+||.++|.+....+........... .....+ ....+ .+ ++++++ + ++
T Consensus 144 ~~g~~i~~~l~~~~g~~~~~~~~~~~---~~~~~~----~~~~~-~~----~~~~~~-----------~---------~~ 191 (401)
T PRK11043 144 ALAPLLGAWLLNHFGWQAIFATLFAI---TLLLIL----PTLRL-KP----SKKARK-----------Q---------SQ 191 (401)
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHHH---HHHHHH----HHHHc-CC----CCCccc-----------c---------ch
Confidence 99999999998877754333222111 111111 11111 11 000000 0 01
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 007555 386 IKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAG 465 (598)
Q Consensus 386 i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g 465 (598)
-+++++..+++|.++..+............+....+.|+.+.|+++..+|+.....+++.++|++..+++.+|++..+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~ 271 (401)
T PRK11043 192 DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL 271 (401)
T ss_pred HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 13456677778766543322211111112233445566667899999999988888889999999999999998876654
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-H
Q 007555 466 AAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-S 544 (598)
Q Consensus 466 ~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-l 544 (598)
.+.......+............. .....+....+ ..++........++...+..| +++||+.|+.++++.+.. .
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~ 346 (401)
T PRK11043 272 PWLLVLFAVSVIAIWLASLLSHP--SLVPLLIPFCV--MAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFL 346 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC--cHHHHHHHHHH--HHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHH
Confidence 33322221111111111111111 11111111111 111221222223333334445 579999999999988774 4
Q ss_pred HHHHhhhhccC
Q 007555 545 VMLGVAIIAND 555 (598)
Q Consensus 545 l~~~~~i~~~~ 555 (598)
.+.+.+.+.+.
T Consensus 347 ~~~~~g~l~~~ 357 (401)
T PRK11043 347 ASLLVSALIST 357 (401)
T ss_pred HHHHHHHccCC
Confidence 55555666553
No 29
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.71 E-value=5.8e-14 Score=144.62 Aligned_cols=338 Identities=17% Similarity=0.059 Sum_probs=215.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHH
Q 007555 150 YALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLS 229 (598)
Q Consensus 150 ~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls 229 (598)
..+..+++...++..+.....|.+..+...+....+.......++.++.+|+.|.++||++|||.+..+.+...+...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~-- 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSL-- 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHH--
Confidence 467788999999999999999999987755999999999999999999999999999999999998888765433311
Q ss_pred HHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhH
Q 007555 230 AAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA 309 (598)
Q Consensus 230 ~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP 309 (598)
.... . . + .+.+++..++.|.......+.....+ .| ..+++ +..++++..+....++.++||
T Consensus 80 --~~~~--~-~----~--~~~~~~~~~l~g~~~~~~~~~~~~~~-~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~ 140 (352)
T cd06174 80 --LLAF--A-S----S--LWLLLVGRFLLGLGGGALYPAAAALI-AE----WFPPK---ERGRALGLFSAGFGLGALLGP 140 (352)
T ss_pred --HHHH--h-c----c--HHHHHHHHHHHHcccccccHhHHHHH-HH----hCCcc---chhhhhhHHHHHHHHHHHHHH
Confidence 1111 1 1 1 23344445555555555444443322 23 45542 788999999999999999999
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHH
Q 007555 310 SLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLG 389 (598)
Q Consensus 310 ~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG 389 (598)
.+++.+....+......+.....+.. .+ .... ..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~----------------------------------~~----- 174 (352)
T cd06174 141 LLGGLLAESLGWRWLFLILAILGLLL---AL----LLLF----------------------------------LL----- 174 (352)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHH---HH----HHHH----------------------------------HH-----
Confidence 99999988766433222221111111 00 0000 00
Q ss_pred HHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhc-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHH
Q 007555 390 WKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQR-GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK-AGAA 467 (598)
Q Consensus 390 ~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~l-g~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r-~g~~ 467 (598)
|.++...............+....+.|..+. |.++.+.|...+..++++++|.+..+++.+|.|..+ ....
T Consensus 175 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 247 (352)
T cd06174 175 -------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLI 247 (352)
T ss_pred -------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 2222222222222221123444566666664 999999999999999999999999999999998876 5443
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHH
Q 007555 468 GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVM 546 (598)
Q Consensus 468 ~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~ 546 (598)
+.... ..+........ + .........+..++....+....++.|+.+|+++||+++|+.+...+... ..+
T Consensus 248 ~~~~~----~i~~~~~~~~~--~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 318 (352)
T cd06174 248 GLLLA----ALGLLLLALAP--S---LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGP 318 (352)
T ss_pred HHHHH----HHHHHHHHHhc--c---HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32211 11111111111 1 11111122333344445678889999999999999999999999999886 445
Q ss_pred HHhhhhccCcchhHHHHHHHHHHH
Q 007555 547 LGVAIIANDVSHFGFLATLSLLSV 570 (598)
Q Consensus 547 ~~~~i~~~~~~~f~~l~l~S~~~V 570 (598)
.+.+.+.+..+......+.+...+
T Consensus 319 ~i~g~l~~~~~~~~~~~~~~~~~~ 342 (352)
T cd06174 319 LLAGLLLDTGGYGGVFLILAALAL 342 (352)
T ss_pred HHHHHHhcccCcchHHHHHHHHHH
Confidence 555766654443333333333333
No 30
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.70 E-value=1.1e-13 Score=148.27 Aligned_cols=348 Identities=12% Similarity=0.060 Sum_probs=204.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHH
Q 007555 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLL 228 (598)
Q Consensus 149 f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~l 228 (598)
|..+|.+-+ ++..+..--+|+|+.+...|...+++...+..++.++.+|+.|.++||++||+... +.+....
T Consensus 9 ~~~~~~~~~---~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~--~~~~~~~--- 80 (382)
T PRK11128 9 LALSYFGYF---FAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPAL--RLLALLT--- 80 (382)
T ss_pred HHHHHHHHH---HHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHH--HHHHHHH---
Confidence 444444444 44577777788999876559999999999999999999999999999999953211 1111011
Q ss_pred HHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhh
Q 007555 229 SAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (598)
Q Consensus 229 s~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~G 308 (598)
.+..+.+.... ++ .+.+++..++.+.......++....+ .+| . ++..+++++.+....++..+|
T Consensus 81 ~~~~~~~~~~~----~~--~~~l~i~~~l~g~~~~~~~~~~~a~~-~~~-----~----~~~~~a~~~~~~~~~lg~~ig 144 (382)
T PRK11128 81 LLFAVAFWFGA----HS--FWLLFVAIGLFNLFFSPLVPLTDALA-NTW-----Q----KQIGLDYGKVRLWGSIAFVIG 144 (382)
T ss_pred HHHHHHHHHhc----cc--HHHHHHHHHHHHHHHcccccHHHHHH-HHH-----H----hhccCCcchHHHHHHHHHHHH
Confidence 00111111111 11 24444444445555544444443322 233 1 145677888888889999999
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHH
Q 007555 309 ASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKL 388 (598)
Q Consensus 309 P~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~e 388 (598)
|.++|.+...+|.......... .....+ ..... .++.+ +++++ ++ + .++..+
T Consensus 145 p~lgg~l~~~~g~~~~f~~~~~----~~~~~~---~~~~~--~~~~~--~~~~~-------~~--~--------~~~~~~ 196 (382)
T PRK11128 145 SALTGKLVSWFGEQAILWILTA----GVASML---LGQLL--RPTIM--PQGES-------RQ--Q--------ESAGWP 196 (382)
T ss_pred HHHHHHHHHHcChhHHHHHHHH----HHHHHH---HHHHc--cCCCC--Ccccc-------cc--c--------cccccc
Confidence 9999999998886543332221 111111 11111 12111 10000 00 0 011234
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 007555 389 GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG 468 (598)
Q Consensus 389 G~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~ 468 (598)
+++..+|+|.++..+....+.......+...++.|+.+.|+++..+|.+.+.++++.+.+.+..+++.+|.|..+....+
T Consensus 197 ~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~ 276 (382)
T PRK11128 197 AWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLS 276 (382)
T ss_pred hHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 67788899987765443333322212345566778888899999999999999999999999999999999987765443
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH--HHHH
Q 007555 469 LIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV--ESVM 546 (598)
Q Consensus 469 l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~--~ll~ 546 (598)
.... ..+.......+ . .+.+....++..++...+....+.+.|+. |++++|++.+..+.+++.. ..++
T Consensus 277 ~~~~----~~~~~~~~~~~---~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~ 346 (382)
T PRK11128 277 AICG----VVRWGLMGSTT---A--LPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMT 346 (382)
T ss_pred HHHH----HHHHHHHHhhh---h--HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3221 11111111111 1 11112223333344445677888888887 5666799999888776555 3556
Q ss_pred HHhhhhccCcch
Q 007555 547 LGVAIIANDVSH 558 (598)
Q Consensus 547 ~~~~i~~~~~~~ 558 (598)
.+.|.+.+....
T Consensus 347 ~i~G~l~~~~g~ 358 (382)
T PRK11128 347 VLSGFLYQHLGA 358 (382)
T ss_pred HHHHHHHHhccH
Confidence 666777665543
No 31
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.69 E-value=2.6e-13 Score=143.00 Aligned_cols=343 Identities=13% Similarity=0.035 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHH-HHHHHHHHHHHHH
Q 007555 153 YACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYIC-LNTVQAAAQLLSA 230 (598)
Q Consensus 153 ~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~-~d~~q~~~v~ls~ 230 (598)
....++..++..++...+|+++.+..+ |...++....+..+..++.+|+.|.++||++|||.++. +.+.. ++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~----~~~~ 78 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLA----ALAC 78 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHH----HHHH
Confidence 456788899999999999999988888 99999999988889999999999999999998886554 33221 1111
Q ss_pred HHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHH
Q 007555 231 AMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 310 (598)
Q Consensus 231 ~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~ 310 (598)
+ ..... .+ .+.+++..++.+.......+.... +-++ ..+++ .......++..+....++.++||.
T Consensus 79 -~-~~~~~-----~~--~~~l~~~~~~~g~~~~~~~p~~~~-~~~~----~~~~~-~~~~~~~~~~~~~~~~~g~~ig~~ 143 (375)
T TIGR00899 79 -L-LFAWN-----RN--YFLLLVLGVLLSSFASTANPQLFA-LARE----HADRT-GREAVMFSSVMRAQISLAWVIGPP 143 (375)
T ss_pred -H-HHHhc-----ch--HHHHHHHHHHHHhhhhhhHHHHHH-HHHH----Hhhhc-chhhHHHHHHHHHHHhHHHHHhhh
Confidence 1 11111 11 123333334444444434443322 2233 22321 111222378888888899999999
Q ss_pred HHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHH
Q 007555 311 LFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGW 390 (598)
Q Consensus 311 lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~ 390 (598)
++|.+....+......+.....+.. .. ...+. .|+.++++++ + +. + ++ +
T Consensus 144 ~~~~l~~~~~~~~~f~~~~~~~~~~---~~----~~~~~-~~~~~~~~~~----------~--~~----~---~~----~ 192 (375)
T TIGR00899 144 LAFWLALGFGFTVMFLTAALAFVLC---GV----LVWLF-LPSYPRGAPG----------A--LT----R---LE----V 192 (375)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHH---HH----HHHHh-CCCcccCccc----------c--cC----c---ch----h
Confidence 9999998777554333322211111 11 11111 1211110000 0 00 0 01 1
Q ss_pred HHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 007555 391 KEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (598)
Q Consensus 391 ~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l 469 (598)
+..+++|.++.......+.+.....+...++.|+. +.|.++.+.|.+.+.....++.+.++.+++.+|+|..+...++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~ 272 (375)
T TIGR00899 193 RGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAA 272 (375)
T ss_pred hhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHH
Confidence 22455665554333322222211123334555664 57999999999988888888888899999999999776654433
Q ss_pred HHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHH
Q 007555 470 IFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLG 548 (598)
Q Consensus 470 ~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~ 548 (598)
..... .........+ ....+ . ...+..++........+.+.|+..|+ ++|+++|+.++..+... ..+.+
T Consensus 273 ~~~~~---~~~~~~~~~~---~~~~~-~--~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~ 342 (375)
T TIGR00899 273 LAGVA---FYTGLAADNS---LWALL-M--LQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSV 342 (375)
T ss_pred HHHHH---HHHHHHHHHH---HHHHH-H--HHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHH
Confidence 21111 1111111111 11111 1 11111222222344556778888876 46799999988877664 44555
Q ss_pred hhhhccC
Q 007555 549 VAIIAND 555 (598)
Q Consensus 549 ~~i~~~~ 555 (598)
.+.+.+.
T Consensus 343 ~g~~~~~ 349 (375)
T TIGR00899 343 GGILAER 349 (375)
T ss_pred HHHHHHh
Confidence 5665543
No 32
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.69 E-value=1e-13 Score=152.75 Aligned_cols=368 Identities=13% Similarity=0.097 Sum_probs=204.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
|.+.+..++++++++.+...+....+|.+..+..-|....+.......+..++.+++.|.++||++||+++..+.++..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 97 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSV 97 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 44678899999999999999999888877654433888888888888899999999999999999999998877654332
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
. +.+..+ .. + .+.+++..++.|.......+.....+ .| ..++ ++..++++.......++
T Consensus 98 ~----~~~~~~--~~-----~--~~~l~~~~~l~G~~~~~~~~~~~~~~-~~----~~~~---~~r~~~~~~~~~~~~~g 156 (496)
T PRK03893 98 G----TLACGF--AP-----G--YWTLFIARLVIGMGMAGEYGSSATYV-IE----SWPK---HLRNKASGFLISGFSIG 156 (496)
T ss_pred H----HHHHHH--Hh-----H--HHHHHHHHHHHHHHHHHHHHHHHHHH-HH----HcCH---HHHHHHHHHHHHHHHHH
Confidence 2 111111 11 1 23344555555554444433332222 23 3333 37889999999999999
Q ss_pred HHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHH
Q 007555 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (598)
Q Consensus 305 ~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (598)
.++||.+++.+....+......+. +......+ +...+. |+.++.+++++ +. .+.++..+...+
T Consensus 157 ~~~~~~~~~~l~~~~~w~~~f~~~----~~~~~~~~---~~~~~~--p~~~~~~~~~~-------~~-~~~~~~~~~~~~ 219 (496)
T PRK03893 157 AVVAAQVYSLVVPVWGWRALFFIG----ILPIIFAL---WLRKNL--PEAEDWKEKHA-------GK-APVRTMVDILYR 219 (496)
T ss_pred HHHHHHHHHHHhccCCHHHHHHHH----HHHHHHHH---HHHHhC--CCchhhhhhcc-------cc-ccchhHHHHHhc
Confidence 999999999998877654332221 11111111 111111 21111000000 00 000000000000
Q ss_pred ---HHH---------HHHHHHh----cCCchH-----------------------HHH-HHH-HHHHHhh--hhhhHHHH
Q 007555 385 ---AIK---------LGWKEYM----QQPVLP-----------------------ASL-AYV-LLCLNVV--LTPGSLMT 421 (598)
Q Consensus 385 ---~i~---------eG~~~~~----~~pvll-----------------------~~l-~~~-lL~~~vl--l~f~~l~~ 421 (598)
+.. -.+...+ ++.... +.. ... ..++... ......++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 299 (496)
T PRK03893 220 GEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLP 299 (496)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHH
Confidence 000 0000000 000000 000 000 0001100 01234567
Q ss_pred HHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHH
Q 007555 422 AFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCL 500 (598)
Q Consensus 422 ~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~ 500 (598)
.|++ +.|+++.+.|.+.+..++++++|+++.+++.+|+|..+....+..... ........... .....+....
T Consensus 300 ~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~ 373 (496)
T PRK03893 300 TYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQ---LLIIPVFAIGG---ANVWVLGLLL 373 (496)
T ss_pred HHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH---HHHHHHhhccc---cHHHHHHHHH
Confidence 7886 689999999999999999999999999999999997766543322111 11111111111 1111111111
Q ss_pred HHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccCcc
Q 007555 501 IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIANDVS 557 (598)
Q Consensus 501 i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~~~ 557 (598)
......+. .......+++|+.+|+++||+++|+..++..+.. +++.+.|.+.+..+
T Consensus 374 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g 430 (496)
T PRK03893 374 FFQQMLGQ-GISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD 430 (496)
T ss_pred HHHHHHhc-ccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC
Confidence 11001111 1234556789999999999999999999888775 45566677766544
No 33
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.68 E-value=1e-12 Score=140.50 Aligned_cols=272 Identities=15% Similarity=0.082 Sum_probs=165.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHH
Q 007555 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQ 226 (598)
Q Consensus 147 r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v 226 (598)
|-.+..+..-.....|..++..++|.+..+...|...+++......+..++..|+.|.++||++||++++.+-+.-.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~--- 79 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFI--- 79 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHH---
Confidence 34455677778889999999999999988876698899998888899999999999999999999999886654321
Q ss_pred HHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHH
Q 007555 227 LLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEI 306 (598)
Q Consensus 227 ~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i 306 (598)
+...+..+ .. + .+.+++.-++.|.......+.....+ .| ..++ ++..++++..+....++.+
T Consensus 80 -i~~~~~~~--~~-----~--~~~~~~~~~l~g~~~~~~~~~~~~~i-~~----~~~~---~~r~~~~~~~~~~~~i~~~ 141 (392)
T PRK10473 80 -IASLLCSL--AE-----T--SSLFLAGRFLQGIGAGCCYVVAFAIL-RD----TLDD---RRRAKVLSLLNGITCIIPV 141 (392)
T ss_pred -HHHHHHHH--hC-----c--HHHHHHHHHHHHhhhhHHHHHHHHHH-HH----HcCH---HHHHHHHHHHHHHHHHHHH
Confidence 11111111 11 1 12233334445554444343332222 23 3333 3788999999999999999
Q ss_pred hhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHH
Q 007555 307 AGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAI 386 (598)
Q Consensus 307 ~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 386 (598)
+||.+++.+....+......+... .++.... +....+ ++. ++.++ ++. .+..
T Consensus 142 ~~~~i~~~l~~~~g~~~~~~~~~~---~~~i~~~---~~~~~~--~~~---~~~~~----------~~~----~~~~--- 193 (392)
T PRK10473 142 LAPVLGHLIMLKFPWQSLFYTMAA---MGILVLL---LSLFIL--KET---RPARA----------PAA----SSKP--- 193 (392)
T ss_pred HHHHHHHHHHhCcChHHHHHHHHH---HHHHHHH---HHHHHc--CCC---CCccc----------CCc----cchH---
Confidence 999999998876664332222211 1111111 111111 111 11000 000 0111
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 007555 387 KLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAG 465 (598)
Q Consensus 387 ~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g 465 (598)
++ .+..+++|.++..+....+.+.....+....+.|.. +.|+++..+|...+..++++++|.+..+++.+|+|..+..
T Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~ 272 (392)
T PRK10473 194 RE-NSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLM 272 (392)
T ss_pred HH-HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 11 223456665544333322222211223233344444 5799999999999999999999999999999999987665
Q ss_pred HHH
Q 007555 466 AAG 468 (598)
Q Consensus 466 ~~~ 468 (598)
.++
T Consensus 273 ~~~ 275 (392)
T PRK10473 273 LTS 275 (392)
T ss_pred HHH
Confidence 544
No 34
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.68 E-value=5.2e-13 Score=142.92 Aligned_cols=371 Identities=11% Similarity=0.031 Sum_probs=211.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 146 ~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
++.+..+..+.++-..++.+..-.+|.+..+..-|....+....+..+..++..|+.|.+.||++||+++..+.++..+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG 81 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 35677888899999999988888888877665448888899999999999999999999999999999998876643322
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~ 305 (598)
.. ...... + .+.+++.-++.|.......+.....++ + +.++ ++..++++.......+..
T Consensus 82 ----~~--l~~~~~-----~--~~~l~~~r~l~G~~~~~~~~~~~~~~~-~----~~~~---~~~~~~~~~~~~~~~~g~ 140 (382)
T PRK10091 82 ----NA--MFTLSS-----S--YLMLAIGRLVSGFPHGAFFGVGAIVLS-K----IIKP---GKVTAAVAGMVSGMTVAN 140 (382)
T ss_pred ----HH--HHHHhC-----c--HHHHHHHHHHHHhhhHHHHHHHHHHHH-H----hCCh---HHhhHHHHHHHHHHHHHH
Confidence 11 111111 1 244555555566554444443333332 3 3443 267789999998889999
Q ss_pred HhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHH
Q 007555 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEA 385 (598)
Q Consensus 306 i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (598)
.+||.++|.+....+......+..... ....+ .....+ |+.+ +++ + . +
T Consensus 141 ~~g~~l~~~l~~~~gwr~~f~~~~~~~---~~~~~---~~~~~l--p~~~--~~~-------------~-----~----~ 188 (382)
T PRK10091 141 LLGIPLGTYLSQEFSWRYTFLLIAVFN---IAVLA---SIYFWV--PDIR--DEA-------------K-----G----G 188 (382)
T ss_pred HHhccHHHHHhhhccHHHHHHHHHHHH---HHHHH---HHHHhC--CCCC--ccc-------------c-----c----C
Confidence 999999999988767544333322111 11111 111111 2111 100 0 0 0
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 007555 386 IKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA 464 (598)
Q Consensus 386 i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~ 464 (598)
.++.++.. ++|.....+....+.+.......+..++|+. ..|+++...|.+.+..++++++|.++.+++.+|+|..+.
T Consensus 189 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~ 267 (382)
T PRK10091 189 LREQFHFL-RSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI 267 (382)
T ss_pred HHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH
Confidence 12334433 4443332222222211110112233445665 479999999999999999999999999999999998776
Q ss_pred HHHHHHHHHHHHHHHHHHH-hhcccccchhHHHHHHHHHHHhhhhhhhhh-hhhhhhhccCCCccchhHHHHHHHHHHHH
Q 007555 465 GAAGLIFQASLLAMAVAVY-WSGSLSQQNPLLFFLCLIVLSRLGHMSYDI-VGAQILQTGIPSSKANLIGTTEISVASLV 542 (598)
Q Consensus 465 g~~~l~~q~~~L~~~v~~~-~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl-~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~ 542 (598)
..++.... ..+.... ...+ ....... ...+...|...... ......|+..|++.+|+..+ ....+-+.
T Consensus 268 ~~~~~~~~----~i~~~~~~~~~~---~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~ 337 (382)
T PRK10091 268 AAVTDFII----VLALLMLFFFGG---MKTASLI--FAFICCAGLFALSAPLQILLLQNAKGGELLGAAGG-QIAFNLGS 337 (382)
T ss_pred HHHHHHHH----HHHHHHHHHHHh---hHHHHHH--HHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHH-HHHHHHHH
Confidence 55443221 1111111 1111 0111111 11112223222222 23356777778888888754 22233333
Q ss_pred HHHHHHhhhhccCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007555 543 ESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHW 580 (598)
Q Consensus 543 ~ll~~~~~i~~~~~~~f~~l~l~S~~~V~~a~~l~~~~ 580 (598)
.+.+.+.|.+.+....+....+.+.+.+..+......+
T Consensus 338 ~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 338 AIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 45677778877765445555555544444443333333
No 35
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.68 E-value=4.4e-13 Score=146.29 Aligned_cols=375 Identities=10% Similarity=-0.039 Sum_probs=199.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
|.+-+..+..+.++..+........+|.+.-+..-|...++....+..++..+.+++.|.+.||++||+++..+.++-.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 33445556666666666666777888888766433999999999999999999999999999999999998777643221
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
. .+...... + .+.+++..++.+.......+.....+ .+| .++ ++..++.+.......++
T Consensus 101 ~------~~~~~~~~-----~--~~~l~~~~~l~g~~~g~~~~~~~~~~-~~~----~~~---~~rg~~~~~~~~~~~~g 159 (434)
T PRK11663 101 I------NILFGFSS-----S--LWAFALLWVLNAFFQGWGWPVCAKLL-TAW----YSR---TERGGWWAIWNTAHNVG 159 (434)
T ss_pred H------HHHHHHHh-----H--HHHHHHHHHHHHHHHHccchHHHHHH-HHh----CCH---HHHHHHHHHHHHHHHHH
Confidence 1 11111111 1 12333333344544444434333322 333 333 36889999999999999
Q ss_pred HHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cccccccCCCCCCCCCCCccchhhhH
Q 007555 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRA-KCSQSCCRTSNEGPVPDADNIVDVGI 383 (598)
Q Consensus 305 ~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (598)
.++||.++|.+....+......+..... +...++ ....+. +.++.. .++.+..+++.++...+.++ .+
T Consensus 160 ~~~~~~~~~~l~~~~gw~~~f~~~~i~~---~~~~~~---~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~--- 228 (434)
T PRK11663 160 GALIPLVVGAIALHYGWRYGMMIAGIIA---IVVGLF---LCWRLR-DKPQAMGLPSVGEWRHDALELAQQQEG-AG--- 228 (434)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHH---HHHHHH---HHHHcC-CCHhhcCCCCcccccccccccchhccc-cC---
Confidence 9999999999988777544333222111 111111 111111 111100 00000000000000000000 00
Q ss_pred HHHHHHHH-HHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007555 384 EAIKLGWK-EYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 461 (598)
Q Consensus 384 ~~i~eG~~-~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~ 461 (598)
.+.++.++ +.+++|.+........+.+.....+...++.|+. +.|+++.+.+...+...+++++|.++.+++.+|++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~ 308 (434)
T PRK11663 229 LSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFN 308 (434)
T ss_pred CChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhcc
Confidence 01222232 3567776554332222222211234445677875 479999999999999999999999999999988721
Q ss_pred -hH-HHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHH
Q 007555 462 -LK-AGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVA 539 (598)
Q Consensus 462 -~r-~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~ 539 (598)
.| ......... ++............ .......+..++. ++.............+..|++.+|++.|+.++..
T Consensus 309 ~~r~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 382 (434)
T PRK11663 309 GNRGPMNLIFAAG--ILLSVGSLWLMPFA-SYVMQAACFFTIG---FFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFA 382 (434)
T ss_pred CCccHHHHHHHHH--HHHHHHHHHHcccc-cHHHHHHHHHHHH---HHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHH
Confidence 11 111110000 01111111111111 1111111111111 1111111122345678889999999999999998
Q ss_pred HHHH-HHHHHhhhhccCcc
Q 007555 540 SLVE-SVMLGVAIIANDVS 557 (598)
Q Consensus 540 ~~~~-ll~~~~~i~~~~~~ 557 (598)
++.. ..+.+.+.+.+..+
T Consensus 383 ~~g~~~~p~~~g~l~~~~g 401 (434)
T PRK11663 383 YLGAALSGYPLAKVLEIWH 401 (434)
T ss_pred HHHHHHhcccHHHHHHhcc
Confidence 8875 45566677665433
No 36
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.68 E-value=1.2e-12 Score=142.39 Aligned_cols=348 Identities=12% Similarity=0.004 Sum_probs=194.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHH
Q 007555 152 LYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAA 231 (598)
Q Consensus 152 L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~ 231 (598)
+-..-+++.+...++.-++|-...+...|....+.......+...+..++.|.+.||++||+++..+.++..+. ..
T Consensus 21 ~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~----~~ 96 (413)
T PRK15403 21 LILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLA----CA 96 (413)
T ss_pred HHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHH----HH
Confidence 44455666677778888888754444447777777777778888899999999999999999998876543322 11
Q ss_pred HHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHH
Q 007555 232 MIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASL 311 (598)
Q Consensus 232 ~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~l 311 (598)
...... + .+.+++.-++.|+.+....+... ++.+| ..++ ++..++++.......++.++||.+
T Consensus 97 --~~~~a~-----~--~~~l~~~r~l~Gi~~~~~~~~~~-~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~g~~l 159 (413)
T PRK15403 97 --ATLFTT-----S--MTQFLIARFIQGTSICFIATVGY-VTVQE----AFGQ---TKGIKLMAIITSIVLVAPIIGPLS 159 (413)
T ss_pred --HHHHcC-----C--HHHHHHHHHHHHHHHHHHHHHHH-HHHHH----hcCH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 1 23444554555655544333332 22334 3332 378899999999999999999999
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHH
Q 007555 312 FGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWK 391 (598)
Q Consensus 312 gGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~ 391 (598)
+|.+....|......+..+.. ++..+ +....+ |+. +++++ + + ...++..++++
T Consensus 160 g~~l~~~~gw~~~f~~~~~~~---~i~~~---~~~~~l--p~~---~~~~~-------~---~------~~~~~~~~~~~ 212 (413)
T PRK15403 160 GAALMHFVHWKVLFAIIAVMG---LIAFV---GLLLAM--PET---VKRGA-------V---P------FSAKSVLRDFR 212 (413)
T ss_pred HHHHHHhcCHHHHHHHHHHHH---HHHHH---HHHHhC--CCC---ccccC-------C---C------CChHHHHHHHH
Confidence 999988777554333322211 11111 111111 211 11000 0 0 01233456778
Q ss_pred HHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 007555 392 EYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 470 (598)
Q Consensus 392 ~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~ 470 (598)
..++||.++.......+.+.....+....+.|+.+ .|+++..+|+.......++++|+.+.+++.+|.+..|.......
T Consensus 213 ~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 292 (413)
T PRK15403 213 NVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVP 292 (413)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHH
Confidence 88899987764443333222212344455667665 59999999999887888888888888887655433333211111
Q ss_pred HHHH-HHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhh--hhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHH
Q 007555 471 FQAS-LLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSY--DIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVM 546 (598)
Q Consensus 471 ~q~~-~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~f--dl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~ 546 (598)
.... ++.+......... .... ...++++..+|.... ++...++.|..+| +||+.|+.+.++.+.. +..
T Consensus 293 ~~~ig~~l~~~~~~~~~~---~~~~--~~~~~~l~~~G~~~~~p~~~~~al~~~~~~---~G~a~a~~~~~~~~~~~~~~ 364 (413)
T PRK15403 293 IQLVGLALLIVGNLLWPH---VWLW--SVLGTSLYAFGIGLIFPTLFRFTLFSNNLP---KGTVSASLNMVILMVMAVSV 364 (413)
T ss_pred HHHHHHHHHHHHHHHccc---cHHH--HHHHHHHHHHHHHHHhHHHHHHHhccCCCC---CcHHHHHHHHHHHHHHHHHH
Confidence 1111 1111111111111 1111 111222222332222 3444467777776 6999999999998885 334
Q ss_pred HHhhhhccC
Q 007555 547 LGVAIIAND 555 (598)
Q Consensus 547 ~~~~i~~~~ 555 (598)
.+.+.+...
T Consensus 365 ~~~g~~~~~ 373 (413)
T PRK15403 365 EIGRWLWFN 373 (413)
T ss_pred HHHHHHHHc
Confidence 444555444
No 37
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.68 E-value=2.8e-14 Score=149.05 Aligned_cols=367 Identities=14% Similarity=0.048 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHH
Q 007555 154 ACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI 233 (598)
Q Consensus 154 ~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l 233 (598)
.+.+........+.++.|.+.-+..-|....+....+..+...+..+++|.++||++||++++.+.++..+. ..+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~~~ 77 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIV----NLFF 77 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHH----HHHH
Confidence 344556666777888888655443339999999999999999999999999999999999998876543322 1111
Q ss_pred HHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhH-HHH
Q 007555 234 IHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA-SLF 312 (598)
Q Consensus 234 ~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP-~lg 312 (598)
.+ .. + .+.+++..++.|.......+.....+ .| ..++ ++..++++..+....+..++|| .++
T Consensus 78 ~~--~~-----~--~~~~~~~~~~~g~~~~~~~~~~~~~~-~~----~~~~---~~r~~~~~~~~~~~~~g~~~~~~~~~ 140 (379)
T TIGR00881 78 GF--ST-----S--LWVMAALWALNGIFQGMGWPPCGRTV-TK----WFSR---SERGTWVSFWNCSHNVGGGLLPPLVL 140 (379)
T ss_pred HH--hh-----h--HHHHHHHHHHHHhhccccCCchHHHH-HH----hcCH---hhheeeEeehhccchhHHHHHHHHHH
Confidence 11 11 1 23344444455554444444443322 23 3343 3678899999999999999999 566
Q ss_pred HHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHH
Q 007555 313 GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKE 392 (598)
Q Consensus 313 GlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~ 392 (598)
+.+....+......+.... ..+..++. +... ++.+++++.++++ ++.+++.+.+ +...++..++.+..+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~---~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 211 (379)
T TIGR00881 141 FGIAELYSWHWVFIVPGII---AIIVSLIC-FLLL---RDSPQSCGLPPAE-EMPNEEPDGD-AEKKEEELTKKQIFLQY 211 (379)
T ss_pred HHHHhcCCchhHHHHHHHH---HHHHHHHH-heee---CCCccccccCccc-cCcccccccc-cccccccccchHHHHHH
Confidence 6665555543322222111 11111110 1111 1111110000000 0000000000 00000111223456677
Q ss_pred HhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 007555 393 YMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIF 471 (598)
Q Consensus 393 ~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~ 471 (598)
.+++|.++.......+++.....+...++.|+.+ .|+++.+.|...+..++++++|.++.+++.+|.+..+........
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~ 291 (379)
T TIGR00881 212 VLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFF 291 (379)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHH
Confidence 7888877654333333222213445566777764 699999999999999999999999999998876433222211111
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhh
Q 007555 472 QASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVA 550 (598)
Q Consensus 472 q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~ 550 (598)
. .....+...++...... .....+ ..................+.++.+|++.||++.|+.++..++.. ..+.+.|
T Consensus 292 ~-~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 367 (379)
T TIGR00881 292 M-ALIIVSLLVYWLNPAAN--PLMDLI-CLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLG 367 (379)
T ss_pred H-HHHHHHHHHHhcCcchh--HHHHHH-HHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHH
Confidence 1 11111111222111101 111111 11111111222333445678999999999999999998887774 4445555
Q ss_pred hhcc
Q 007555 551 IIAN 554 (598)
Q Consensus 551 i~~~ 554 (598)
.+.+
T Consensus 368 ~l~~ 371 (379)
T TIGR00881 368 YLAD 371 (379)
T ss_pred HHHH
Confidence 5543
No 38
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.67 E-value=1.5e-13 Score=148.83 Aligned_cols=365 Identities=10% Similarity=-0.002 Sum_probs=194.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~ 223 (598)
++++|+.++...++-.++..++.--+|.|+.+..+ |....++......+...+.+|+.|.+.||++|||++..+..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~ 87 (420)
T PRK09528 8 KNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLL 87 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 67789999999999999888888888888888788 99999999999999999999999999999999999876543321
Q ss_pred HHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHH
Q 007555 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (598)
Q Consensus 224 ~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~ 303 (598)
+. ......+.... ......++. ..+.+........+....+ .+|.+.. +++.....+..+....+
T Consensus 88 ~~---~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~g~~~g~~~~~~~~ 152 (420)
T PRK09528 88 VL---FGPFFIYVFAP-----LLQYNILLG-AIVGGIYLGFGFLAGAGAI-EAYIERV-----SRRSGFEYGRARMWGSL 152 (420)
T ss_pred HH---HHHHHHHHHHH-----HHHHHHHHH-HHHHHHHhhhhhccchhhh-hhHHHHH-----HhhccccchhhHHhhhH
Confidence 11 10010110000 000001111 1111111111111111222 2232111 11222344667777888
Q ss_pred HHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhH
Q 007555 304 CEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (598)
Q Consensus 304 ~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (598)
+..+||.++|.++.. +.........+..+.. . ...... +++.+++++.++ +++ ++. .+..+
T Consensus 153 g~~i~~~~~g~l~~~-~~~~~f~~~~~~~~~~----~---~~~~~~-~~~~~~~~~~~~------~~~-~~~---~~~~~ 213 (420)
T PRK09528 153 GWALCAFIAGILFNI-NPQINFWLGSGSALIL----L---VLLFFA-KPDAPSTAKVAN------ALG-ANA---SAVSL 213 (420)
T ss_pred HHHHHHHHHHHHHhc-CchHhHHHHHHHHHHH----H---HHHhcc-cccccchhhhcc------chh-ccc---ccccH
Confidence 999999999999763 4332222211111111 1 111111 111111000000 000 000 01112
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh----cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007555 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ----RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (598)
Q Consensus 384 ~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~----lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrl 459 (598)
+ .++.++|||.++..+............+...++.|+.+ .+.+...+|.+.++..++..++.+..+++.+|+
T Consensus 214 ---~-~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 289 (420)
T PRK09528 214 ---K-DALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI 289 (420)
T ss_pred ---H-HHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 23446677765543332222211111233345555542 467778899999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHH-HHHH
Q 007555 460 GILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTT-EISV 538 (598)
Q Consensus 460 g~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv-~~sl 538 (598)
|..+...++... ...+...+.... +.. . +.....+..++...+.....++.++.+|++.++...+. .++.
T Consensus 290 g~~~~~~~~~~l----~~~~~~l~~~~~--~~~-~--~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 360 (420)
T PRK09528 290 GAKNALLLAGTI----MAVRIIGSGFAT--GPL-E--VSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFA 360 (420)
T ss_pred CcchhhHHHHHH----HHHHHHHHHhcc--cHH-H--HHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHH
Confidence 987765443221 111211111111 111 1 11122223334444556667889999999999988655 3333
Q ss_pred HHHH-HHHHHHhhhhccCc
Q 007555 539 ASLV-ESVMLGVAIIANDV 556 (598)
Q Consensus 539 ~~~~-~ll~~~~~i~~~~~ 556 (598)
..+. ...+.+.|.+.+..
T Consensus 361 ~~lg~~ig~~~~G~l~~~~ 379 (420)
T PRK09528 361 KQLGAVFLSTLAGNLYDSI 379 (420)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 3322 24556666665543
No 39
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.66 E-value=7.8e-13 Score=147.03 Aligned_cols=368 Identities=13% Similarity=0.037 Sum_probs=215.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHH
Q 007555 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (598)
Q Consensus 148 ~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ 227 (598)
.+..+..+.++..+...+...|+|-+..++..|...++....+..+....+.|+.|.+.||++||++++.+.++..+.
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~-- 84 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLA-- 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH--
Confidence 356678899999999999999999998877668888899988889999999999999999999999998877643322
Q ss_pred HHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHh
Q 007555 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (598)
Q Consensus 228 ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~ 307 (598)
+.+..+ .. + .+.+++.-++.|+......++....+.++ ..++ ++..++++.......++..+
T Consensus 85 --~~~~~~--a~-----~--~~~li~~r~l~G~g~~~~~~~~~~~l~~~----~~~~---~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 85 --SLAAAF--SP-----T--ASWLIATRALLAIGAAMIVPATLAGIRAT----FTEE---KQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred --HHHHHH--cC-----C--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCH---HHHHHHHHHHHHHHHHHHHH
Confidence 111111 11 1 23344444455655555555444433333 2222 47899999999999999999
Q ss_pred hHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCC-------------CCCCCCC
Q 007555 308 GASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTS-------------NEGPVPD 374 (598)
Q Consensus 308 GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~-------------~~~~~~~ 374 (598)
||.++|.+....|......++....+... . +..+. .|+.+++++++....+. -.+.. .
T Consensus 147 gp~lgg~l~~~~gwr~~f~i~~~~~~~~~---~----l~~~~-l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~-~ 217 (495)
T PRK14995 147 GPLVGGILLEHFYWGSVFLINVPIVLVVM---G----LTARY-VPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTAL-K 217 (495)
T ss_pred HHHHHHHhhccCChHHHHHHHHHHHHHHH---H----HHHHh-CCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhcc-c
Confidence 99999999998886554443322211111 1 11111 12110000000000000 00000 0
Q ss_pred Cccchhhh---------------HHHHHH-----HHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhH
Q 007555 375 ADNIVDVG---------------IEAIKL-----GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSI 433 (598)
Q Consensus 375 ~~~~~~~~---------------~~~i~e-----G~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~ 433 (598)
........ +.|.+. .+ ..+++|.+.......+..+.....+...++.|+.. +|+++.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ 296 (495)
T PRK14995 218 GFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDM-RLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLE 296 (495)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCH-HHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 00000000 000000 01 23456655554443333322212333445567764 7999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH-hhcccccchhHHHHHHHHHHHhhhhhhhh
Q 007555 434 IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVY-WSGSLSQQNPLLFFLCLIVLSRLGHMSYD 512 (598)
Q Consensus 434 iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~-~~g~~~~~~~~~~~~~~i~lsr~Gl~~fd 512 (598)
.|......+++..+++.+.+++.+|+|..+....+.... ..+...+ .......... .....++.++|..+..
T Consensus 297 ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~----~~~~~~l~~~~~~~~~~~---~~~~~~l~G~g~g~~~ 369 (495)
T PRK14995 297 AGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALS----ALSFYGLAMTDFSTQQWQ---AWGLMALLGFSAASAL 369 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHH----HHHHHHHHHhcCCCchHH---HHHHHHHHHHhHHHHH
Confidence 999999999999999999999999999755444333211 1111111 1111011111 1122334445555667
Q ss_pred hhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhh
Q 007555 513 IVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAII 552 (598)
Q Consensus 513 l~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~ 552 (598)
...+...|+.+|++++|+.+++.++..++.. .+..+.+.+
T Consensus 370 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 370 LASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred HHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788899999999999999999988877664 333333433
No 40
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.66 E-value=2.3e-12 Score=138.66 Aligned_cols=346 Identities=13% Similarity=0.033 Sum_probs=191.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHH-HHHHHHHHHHH
Q 007555 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPA-YICLNTVQAAA 225 (598)
Q Consensus 148 ~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~v-mi~~d~~q~~~ 225 (598)
....++++.+++.++..+....+|.++.+..+ |...+++......+...+++++.|.+.||++|||. ++.+.+.-.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~- 94 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVL- 94 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH-
Confidence 46789999999999999999999999988888 99999998766677778888888888999988875 5555442111
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~ 305 (598)
.+. .+.... + .+.+++...+.+.......+..+. +-+||. +++ +.+....|+..+....++.
T Consensus 95 ---~~~--~~~~~~-----~--~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~-~~~~~~~~~~~~~~~~lg~ 156 (393)
T PRK15011 95 ---ACT--LFAWNR-----N--YFVLLFVGVFLSSFGSTANPQMFA-LAREHA----DKT-GREAVMFSSFLRAQVSLAW 156 (393)
T ss_pred ---HHH--HHHHhh-----H--HHHHHHHHHHHHHHHHhhHHHHHH-HHHHHh----hhc-cchHHHHHHHHHHHHHHHH
Confidence 111 111111 1 123333333445555544444332 223322 221 1234567889998999999
Q ss_pred HhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHH
Q 007555 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEA 385 (598)
Q Consensus 306 i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (598)
++||.++|.+...+|............ +...+ +....+ |+.+++++. +. .+ .++
T Consensus 157 ~~g~~i~~~l~~~~gw~~~f~~~~~~~---~~~~~---~~~~~~--~~~~~~~~~---------~~-~~--------~~~ 210 (393)
T PRK15011 157 VIGPPLAYALAMGFSFTVMYLSAAVAF---IVCGV---MVWLFL--PSMRKELPL---------AT-GT--------LEA 210 (393)
T ss_pred HHhhHHHHHHHHhcChHHHHHHHHHHH---HHHHH---HHHhhc--CccCCCCcc---------cc-cc--------ccc
Confidence 999999999988777654333222111 11111 111111 211100000 00 00 000
Q ss_pred HHHHHHHHhcC-CchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 007555 386 IKLGWKEYMQQ-PVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (598)
Q Consensus 386 i~eG~~~~~~~-pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r 463 (598)
..++ +.....+....+.+.....+...++.|++ +.|+++.+.|.+.+...++++++.++.+++.+|+|..+
T Consensus 211 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~ 283 (393)
T PRK15011 211 -------PRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF 283 (393)
T ss_pred -------cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 1112 21222222222222221223345666776 47999999999988888888899999999999999876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH
Q 007555 464 AGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 543 (598)
Q Consensus 464 ~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ 543 (598)
....+...... ........++ ....+....+.....| ........+.|+..|+ ++|+.++..+...++..
T Consensus 284 ~~~~~~~~~~~---~~~~~~~~~~----~~~~l~~~~l~~~~~g--~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~ 353 (393)
T PRK15011 284 LMRVAAVAGVC---FYAGMLMAHS----PAILLGLQLLNAIYIG--ILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGW 353 (393)
T ss_pred HHHHHHHHHHH---HHHHHHHHhh----HHHHHHHHHHHHHHHH--HHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHH
Confidence 55433221111 1111111111 1111111011111111 1122334667888885 59999999887766653
Q ss_pred -HHHHHhhhhccC
Q 007555 544 -SVMLGVAIIAND 555 (598)
Q Consensus 544 -ll~~~~~i~~~~ 555 (598)
+.+.+.|++.+.
T Consensus 354 ~~g~~l~G~i~~~ 366 (393)
T PRK15011 354 IIAGSLAGIVAEI 366 (393)
T ss_pred HHHHHHHHHHHHH
Confidence 455565766543
No 41
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.65 E-value=1.1e-12 Score=144.05 Aligned_cols=374 Identities=11% Similarity=0.020 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 150 YALYACCLAGNLVEQLWN----FAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 150 ~~L~~gq~lS~~G~~i~~----fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
+.++.+.++...+..+.+ +++|.+. +. + |....++...+..+...+.+|+.|.+.||++||++++.+.++..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~-~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHH-Hc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHH
Confidence 456677777777766653 4566444 44 7 999999999999999999999999999999999999877654332
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
. +....+.... ..+ .+.+++..++.|..+....+.....+. +| .++ ++..++++.......++
T Consensus 106 ~----~~~~~~~~~~---~~~--~~~~~~~~~l~gi~~g~~~~~~~~~~~-~~----~~~---~~r~~~~~~~~~~~~~g 168 (452)
T PRK11273 106 V----MLFMGFVPWA---TSS--IAVMFVLLFLCGWFQGMGWPPCGRTMV-HW----WSQ---KERGGIVSVWNCAHNVG 168 (452)
T ss_pred H----HHHHHhhhcc---ccc--HHHHHHHHHHHHHHHhccchHHHHHHH-Hh----CCh---HHHHHHHHHHHHHHHhh
Confidence 2 1111111000 011 223444445556555554443322221 22 232 36788898887777776
Q ss_pred H-HhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cccccccCCCCCCCCCCCccchhhh
Q 007555 305 E-IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRA-KCSQSCCRTSNEGPVPDADNIVDVG 382 (598)
Q Consensus 305 ~-i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (598)
. +.||++++.+....+....+.+.... .++..++..+.+. +.++.. .++.++.+++..++..+.+. .+
T Consensus 169 ~~~~~~l~~~~~~~~~gw~~~f~i~~~~---~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 238 (452)
T PRK11273 169 GGLPPLLFLLGMAWFNDWHAALYMPAFA---AILVALFAFAMMR----DTPQSCGLPPIEEYKNDYPDDYNEKHE-QE-- 238 (452)
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHH---HHHHHHHHHHHcc----CCHhhcCCCChhhhhhccccccccccC-CC--
Confidence 4 66776654443323433222222111 1111111111111 101100 00000000000000000000 00
Q ss_pred HHHHHHHH-HHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007555 383 IEAIKLGW-KEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (598)
Q Consensus 383 ~~~i~eG~-~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg 460 (598)
.+.++.+ +..+++|.++.......+.+.........++.|+.+ .|+++...|......+++++.|.++++++.+|++
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~ 317 (452)
T PRK11273 239 -LTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVF 317 (452)
T ss_pred -ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1123333 335678877654433333222212345567778876 6999999999888999999999999999999884
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHH
Q 007555 461 ILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS 540 (598)
Q Consensus 461 ~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~ 540 (598)
..|......... .+...+...++..... ....... .+.+...+..........+.++..|++.+|+++|..+++..
T Consensus 318 ~~r~~~~~~~~~-~l~~~~~~~~~~~~~~-~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 393 (452)
T PRK11273 318 RGNRGATGVFFM-TLVTIATIVYWLNPAG-NPTVDMA--CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGY 393 (452)
T ss_pred cCCcchHHHHHH-HHHHHHHHHHHHhccc-ChHHHHH--HHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHH
Confidence 322111111100 1111222222221110 1111111 11111111111112223456899999999999999988876
Q ss_pred HHH-H-HHHHhhhhccCcc
Q 007555 541 LVE-S-VMLGVAIIANDVS 557 (598)
Q Consensus 541 ~~~-l-l~~~~~i~~~~~~ 557 (598)
+.. + .+.+.|.+.+..+
T Consensus 394 ~g~~~~g~~v~g~l~~~~g 412 (452)
T PRK11273 394 LGGSVAASAIVGYTVDFFG 412 (452)
T ss_pred HHHHHhhhhhHHHHHHHhc
Confidence 653 3 3556666655433
No 42
>PRK10504 putative transporter; Provisional
Probab=99.64 E-value=3.3e-12 Score=140.14 Aligned_cols=371 Identities=12% Similarity=-0.015 Sum_probs=211.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 146 ~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
++.++.++.+.++..+...+...++|.+.-+..-|....+.......+...+..|+.|.+.||++|||+++.+.++-.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 44688899999999999999999999998775449999888888888899999999999999999999988664432211
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~ 305 (598)
.. ...... + .+.+++..++.|.......+.....+ .| ..++ ++..++++..+....+..
T Consensus 89 ----~~--~~~~~~-----~--~~~l~~~~~l~g~~~~~~~~~~~~~~-~~----~~~~---~~~~~~~~~~~~~~~~g~ 147 (471)
T PRK10504 89 ----SL--FCALSG-----T--LNELLLARVLQGVGGAMMVPVGRLTV-MK----IVPR---EQYMAAMTFVTLPGQVGP 147 (471)
T ss_pred ----HH--HHHHhC-----C--HHHHHHHHHHHHhhhHHHHHHHHHHH-HH----HcCH---HHHHHHHHHHHHHHHHHH
Confidence 11 111111 1 23344444555555444444433322 23 2332 377889999999999999
Q ss_pred HhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCC-----------CCCCCC
Q 007555 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSN-----------EGPVPD 374 (598)
Q Consensus 306 i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~-----------~~~~~~ 374 (598)
.+||.++|.+....+......++........ . ..... .|..+..+...+...... .++.+.
T Consensus 148 ~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~---~----~~~~~-~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (471)
T PRK10504 148 LLGPALGGLLVEYASWHWIFLINIPVGIIGA---I----ATLML-MPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKG 219 (471)
T ss_pred HhhhHHHHHHHhhccHHHHHHHHHHHHHHHH---H----HHHHh-CCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999987775433333222111111 1 11111 111100000000000000 000000
Q ss_pred Cccchhhh---------------HHHH-----HHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhH
Q 007555 375 ADNIVDVG---------------IEAI-----KLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSI 433 (598)
Q Consensus 375 ~~~~~~~~---------------~~~i-----~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~ 433 (598)
........ +++- +-.++ ++++|.++..+...+++...........+.|++ ..|.++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 298 (471)
T PRK10504 220 LGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLK-LFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFH 298 (471)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHH-HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 00000000 0000 00222 466777766555444443322233345555666 48999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhh
Q 007555 434 IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDI 513 (598)
Q Consensus 434 iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl 513 (598)
.|+.....+++++.+..+.+++.+|+|..+....+.... .+.+....+.... . ... .+....++..++......
T Consensus 299 ~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~---~~~~~~~~~~~~~-~-~~~-~~~~~~~~~g~~~~~~~~ 372 (471)
T PRK10504 299 AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGL---ALVSLLFMLVALL-G-WYY-LLPFVLFLQGMVNSTRFS 372 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHH---HHHHHHHHhcccc-c-cHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999877655443211 1111111111111 1 111 111112222233334456
Q ss_pred hhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhh
Q 007555 514 VGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAII 552 (598)
Q Consensus 514 ~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~ 552 (598)
..+.+.++.+|++.+|+.+|+.+..+++.. +++.+.+.+
T Consensus 373 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 373 SMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred HHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 777889999999999999999988887774 333333433
No 43
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.63 E-value=6.8e-13 Score=146.09 Aligned_cols=369 Identities=8% Similarity=-0.013 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 150 YALYACCLAGNLVEQLWNFAWPSAIA---LLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 150 ~~L~~gq~lS~~G~~i~~fAlpL~v~---~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
+.++.+-++....+..+.++++.+.. ...+ |....+.......+-..+.+|+.|.++||++||++++.+.++..+.
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~ 97 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLG 97 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHH
Confidence 44556666655544444454444443 3344 7677777766666667889999999999999999998776543221
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHH-HHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVL-VLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~-~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
+.+..+. . + .+.+++.. ++.|.....+.+.....+ .+|. ++ +..++++.......+.
T Consensus 98 ----~~~~~~~--~-----~--~~~l~~~~~~l~G~~~~~~~~~~~~~~-~~~~----~~----~r~~a~g~~~~~~~~g 155 (455)
T TIGR00892 98 ----MILASFS--S-----N--VIELYLTAGFITGLGLAFNFQPSLTML-GKYF----YR----RRPLANGLAMAGSPVF 155 (455)
T ss_pred ----HHHHHHh--h-----h--HHHHHHHHHHHHHhcchhhhhHHHHHH-HHHH----Hh----hHHHHHHHHHhcccHH
Confidence 1111121 1 1 12233222 233433333222222222 3443 22 5678999999999999
Q ss_pred HHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHH
Q 007555 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (598)
Q Consensus 305 ~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (598)
..+||.++|.+....|......+.....+.. .+ ..++..+. ++..++.+++.+. ... .....+ +....+..+
T Consensus 156 ~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~---~v-~~~~~~~~-~~~~~~~~~~~~~-~~~-~~~~~~-~~~~~~~~~ 227 (455)
T TIGR00892 156 LSTLAPLNQYLFESFGWRGSFLILGGLLLHC---CV-CGALMRPV-GPSQRVSKSKSKE-GLP-PDGSTK-KLSKKSTAE 227 (455)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHHHH---HH-HHHHhCCC-Ccccccccccccc-cCC-CCCccc-cccccchhh
Confidence 9999999999988777554333322211111 11 11122111 0000000000000 000 000000 000011123
Q ss_pred HHHHH--HHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh--h
Q 007555 385 AIKLG--WKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL--G 460 (598)
Q Consensus 385 ~i~eG--~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrl--g 460 (598)
+.++. ++ ++++|.++..+....+.+.........++.|+.+.|+++...|.+.+..+++++++..+.+++.+|. +
T Consensus 228 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~ 306 (455)
T TIGR00892 228 KINRFLDFS-LFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIR 306 (455)
T ss_pred hhhhhcchH-HhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 33332 33 5678876654333322222212233456678778899999999999999999999998888887653 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHH
Q 007555 461 ILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS 540 (598)
Q Consensus 461 ~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~ 540 (598)
..+...+.... .+..++........ ....+ ....++..++.........++.++.+|++++|+..|+.++..+
T Consensus 307 ~~~~~~~~~~~--~~~~l~~ll~~~~~---~~~~~--~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 379 (455)
T TIGR00892 307 PHVQYLFSFAL--LFNGLTHLLCALAG---DYTGL--VIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVEC 379 (455)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHhc---hHHHH--HHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHH
Confidence 33222221110 11111111111111 11111 1112222334445567788899999999999999999999988
Q ss_pred HHH-HHHHHhhhhccCc
Q 007555 541 LVE-SVMLGVAIIANDV 556 (598)
Q Consensus 541 ~~~-ll~~~~~i~~~~~ 556 (598)
+.. ..+.+.|.+.+..
T Consensus 380 lg~~igp~i~G~l~~~~ 396 (455)
T TIGR00892 380 CAVLIGPPLAGRLVDAT 396 (455)
T ss_pred HHHHccccceeeeehhc
Confidence 875 4445556665544
No 44
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.63 E-value=1.5e-12 Score=142.53 Aligned_cols=370 Identities=14% Similarity=0.048 Sum_probs=214.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHH
Q 007555 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (598)
Q Consensus 148 ~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ 227 (598)
.+..+..+.++..++..+...++|.+..+...|....+.......++.++..|+.|.+.||++||++++.+.++..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~-- 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG-- 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH--
Confidence 356778899999999999999999998777668889999999999999999999999999999999998776543222
Q ss_pred HHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHh
Q 007555 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (598)
Q Consensus 228 ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~ 307 (598)
.. ..... .+ .+.+++.-++.|.......+.....+ .| ..++ ++..++++.......++..+
T Consensus 81 --~~--~~~~~-----~~--~~~l~~~~~~~G~~~~~~~~~~~~~i-~~----~~~~---~~r~~~~~~~~~~~~~g~~~ 141 (485)
T TIGR00711 81 --SL--LCGVA-----PN--LELMIIFRVIQGFGGGPLIPLSFSTL-LN----IYPP---EKRGRAMAIWGLTVLVAPAL 141 (485)
T ss_pred --HH--HHhCc-----CC--HHHHHHHHHHHHhhhhhHHHHHHHHH-HH----HCCH---HHHHHHHHHHHHHHHHHhhh
Confidence 11 11111 11 23344444455555554444443322 23 3443 37889999999999999999
Q ss_pred hHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc-cccC-------------CCCCCCCC
Q 007555 308 GASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQ-SCCR-------------TSNEGPVP 373 (598)
Q Consensus 308 GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~-~~~~-------------~~~~~~~~ 373 (598)
||.++|.+....+......+.....+... .+. +.. . ++.++++..+ +... ..++++..
T Consensus 142 g~~~~~~l~~~~~w~~~f~~~~~~~~~~~---~~~-~~~--~--~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~ 213 (485)
T TIGR00711 142 GPTLGGWIIENYHWRWIFLINVPIGIIVV---VVA-FFI--L--PRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPER 213 (485)
T ss_pred hhccHhHhccCcCceehhhhhhHHHHHHH---HHH-HHH--c--CCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 99999999887775443333322111111 100 111 1 1111100000 0000 00000000
Q ss_pred CCccchhhhH---------------HHHH-----HHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChh
Q 007555 374 DADNIVDVGI---------------EAIK-----LGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPS 432 (598)
Q Consensus 374 ~~~~~~~~~~---------------~~i~-----eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~ 432 (598)
+..+ .+... ++.+ ..++ .+++|.+........+...........++.|+.+ .|+++.
T Consensus 214 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~ 291 (485)
T TIGR00711 214 GWFD-SNEILILSITGLVAIIAFVVWELTDDNPLVDLR-LFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTAL 291 (485)
T ss_pred CCCC-chHHHHHHHHHHHHHHHHHHHHHcCCCCccCHH-HHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 0000 00000 0000 0112 3455554443333222222112233455667765 799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHh-hcccccchhHHHHHHHHHHHhhhhhhh
Q 007555 433 IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYW-SGSLSQQNPLLFFLCLIVLSRLGHMSY 511 (598)
Q Consensus 433 ~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~-~g~~~~~~~~~~~~~~i~lsr~Gl~~f 511 (598)
+.|......+++.++|..+.+++.+|+|..+....+.. +...+..... ...+. ..........++..+|...+
T Consensus 292 ~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~g~~~~ 365 (485)
T TIGR00711 292 QAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLI----LYAVGFYWRAFTFTPD--TPFLAIALPQFIRGFGMGCF 365 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHH----HHHHHHHHHhccCCCC--CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998665443322 1122222111 11111 11111111233344455455
Q ss_pred hhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhcc
Q 007555 512 DIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAN 554 (598)
Q Consensus 512 dl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~ 554 (598)
..+.....|+.+|++++|+++|+.+...++.. ++..+.+.+..
T Consensus 366 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 366 FMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777888999999999999999999887774 33444454443
No 45
>TIGR00895 2A0115 benzoate transport.
Probab=99.62 E-value=7.1e-13 Score=139.64 Aligned_cols=354 Identities=15% Similarity=0.057 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHH
Q 007555 150 YALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLS 229 (598)
Q Consensus 150 ~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls 229 (598)
...+...+....+...+.+..|.+.....-|....+.......+..++.+++.|.++||++||++++.+.++..+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~---- 95 (398)
T TIGR00895 20 ILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVF---- 95 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHH----
Confidence 3344455555555666666677666554338888999998889999999999999999999999998776543322
Q ss_pred HHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhH
Q 007555 230 AAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA 309 (598)
Q Consensus 230 ~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP 309 (598)
.. ...... + .+.+++..++.|.......+.....+ .| ..++ ++..++++.......+..++||
T Consensus 96 ~~--~~~~~~-----~--~~~~~~~~~~~g~~~~~~~~~~~~~~-~~----~~~~---~~r~~~~~~~~~~~~~g~~~~~ 158 (398)
T TIGR00895 96 TL--LCALAT-----N--VTQLLILRFLAGLGLGGLMPNLNALV-SE----YAPK---RFRGTAVGLMFCGYPIGAAVGG 158 (398)
T ss_pred HH--HHHHcc-----c--hHHHHHHHHHHhcccccchhhHHHHH-HH----HcCH---HhhchhHhhHhhHHHHHHHHHH
Confidence 11 111111 1 13334444445544444444333222 23 3333 3678999999999999999999
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc-----------ccCCCCCCCCCCCccc
Q 007555 310 SLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQS-----------CCRTSNEGPVPDADNI 378 (598)
Q Consensus 310 ~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~ 378 (598)
.++|.+....+......+..... .....+..+.+.+ .+.....+++++ ..++. +.+.++.+ .
T Consensus 159 ~~~~~l~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~ 231 (398)
T TIGR00895 159 FLAGWLIPVFGWRSLFYVGGIAP---LLLLLLLMRFLPE--SIDFLVSKRPETVRRIVNAIAPQMQAEA-QSALPEQK-A 231 (398)
T ss_pred HHHHHHhhcccceeehhhhhhHH---HHHHHHHHHhCCC--CChHHHhcCHHHHHHHHHHHHHhccccc-cccccccc-c
Confidence 99999988766443222221111 1111111011110 000000000000 00000 00000000 0
Q ss_pred hhhhHHHHHHHHHHHhcCCchHHHHHHHHHHH---HhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 007555 379 VDVGIEAIKLGWKEYMQQPVLPASLAYVLLCL---NVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYL 455 (598)
Q Consensus 379 ~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~---~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l 455 (598)
.+ ++.++-++..++++..+....+...++ .........++.+..+.|+++...|...+..++++++|.++.+++
T Consensus 232 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l 308 (398)
T TIGR00895 232 TQ---GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWL 308 (398)
T ss_pred cc---chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 111223333444443333222211111 110112223344445689999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHH
Q 007555 456 VRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTE 535 (598)
Q Consensus 456 ~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~ 535 (598)
.+|+|..+......... ..+........ +....+. ..++.+++.........++.++.+|+++||++.|+.
T Consensus 309 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 379 (398)
T TIGR00895 309 ADRLGPRVTALLLLLGA----VFAVLVGSTLF--SPTLLLL---LGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWA 379 (398)
T ss_pred HhhcchHHHHHHHHHHH----HHHHHHHHHhh--CHHHHHH---HHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 99998653322211111 11111111011 1111111 122223334455667789999999999999999999
Q ss_pred HHHHHHHH
Q 007555 536 ISVASLVE 543 (598)
Q Consensus 536 ~sl~~~~~ 543 (598)
.+...+..
T Consensus 380 ~~~~~~g~ 387 (398)
T TIGR00895 380 IGIGRLGA 387 (398)
T ss_pred HHHHHHHH
Confidence 99887775
No 46
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.61 E-value=4.8e-12 Score=132.10 Aligned_cols=333 Identities=12% Similarity=0.001 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccc
Q 007555 167 NFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSM 246 (598)
Q Consensus 167 ~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~ 246 (598)
..-.|.+..+..-|...++....+..+...+..|+.|.++||++||+++..+.++..+. +. ...... +
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~----~~--~~~~~~-----~- 90 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG----FT--FYAIAD-----S- 90 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH----HH--HHHHHH-----H-
Confidence 33444444443339999999999999999999999999999999999998876543322 11 111111 1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchhHHHH
Q 007555 247 LLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLK 326 (598)
Q Consensus 247 l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~~~l~ 326 (598)
.+.+++.-++.|.............+. +|. ++ +..++++.......+..++++.+.+.+.+..+......
T Consensus 91 -~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~----~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~ 160 (377)
T TIGR00890 91 -LAALYLTYGLASAGVGIAYGIALNTAV-KWF----PD----KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFI 160 (377)
T ss_pred -HHHHHHHHHHHhHHHHHHHHhHHHHHH-HHc----Cc----ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHH
Confidence 133344434444443333222222222 232 22 45688888888877777766666666665555433222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHHHHHHH
Q 007555 327 FAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYV 406 (598)
Q Consensus 327 ~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~ 406 (598)
+.... ........ +... ++++++++.+ +. +. + +.+..++..+++|.++......
T Consensus 161 ~~~~~---~~~~~~~~-~~~~----~~~~~~~~~~--------~~--~~----~----~~~~~~~~~~~~~~~~~~~~~~ 214 (377)
T TIGR00890 161 YMGII---FLLVIVLG-AFLI----GYPPGQLIKT--------NI--EV----S----VKDYTVWEMLRTPQFWVLYLSF 214 (377)
T ss_pred HHHHH---HHHHHHHH-HHhe----ecCchhcccc--------Cc--cc----c----hhhhhHHHHHcCccHHHHHHHH
Confidence 22111 11111110 1111 1111100000 00 00 0 0012334456677655432222
Q ss_pred HH-HHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 007555 407 LL-CLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS 485 (598)
Q Consensus 407 lL-~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~ 485 (598)
.+ ++.. .......+.|.++.|.++.+.+.+.+..++++++|.++.+++.+|+|..+....+.... ..+......
T Consensus 215 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~----~~~~~~~~~ 289 (377)
T TIGR00890 215 FLNAVSG-LLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGIS----AVGMAAMLF 289 (377)
T ss_pred HHHhHHH-HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH----HHHHHHHHH
Confidence 22 2211 12333455576778999999999999999999999999999999999766554433211 111111111
Q ss_pred cccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccC
Q 007555 486 GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAND 555 (598)
Q Consensus 486 g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~ 555 (598)
... ......+. ...+..++..........+.++.+|+++||+..|..++...+.. ..+++.+.+.+.
T Consensus 290 ~~~--~~~~~~~~-~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 357 (377)
T TIGR00890 290 IPM--LNDVLFLA-TVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE 357 (377)
T ss_pred ccc--chhHHHHH-HHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 110 11111111 11111111112233456788999999999999999998887775 455555666543
No 47
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.60 E-value=9.1e-12 Score=133.16 Aligned_cols=344 Identities=13% Similarity=0.051 Sum_probs=198.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
.++++..++.++++-.++..+....+|.+..+..-|...+++...+..+...+.+|+.|.+.||++|||++..+-+.-.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999987655999999999999999999999999999999999988766543221
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
... .... .+ + .+.+++..++.|.......+.....+. + ..++ ++..++.+..+..-.+.
T Consensus 84 ----~~~--~~~~-~~----~--~~~l~~~~~l~G~~~~~~~~~~~~~~~-~----~~~~---~~~~~~~~~~~~~~~~g 142 (381)
T PRK03633 84 ----GCA--GLGL-MV----G--FWSWLAWRFVAGIGCAMIWVVVESALM-C----SGTS---RNRGRLLAAYMMVYYLG 142 (381)
T ss_pred ----HHH--HHHH-hc----c--HHHHHHHHHHHHHHHHHHHHHHHHHHH-H----hCCH---HHHHHHHHHHHHHHHHH
Confidence 111 1111 11 1 234445445555544444443333322 2 2222 36678888888888888
Q ss_pred HHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHH
Q 007555 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (598)
Q Consensus 305 ~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (598)
..+||.+++.+........ .+.... .... .+ .....+. + + ++.+ +++. ++
T Consensus 143 ~~~g~~~~~~l~~~~~~~~-~~~~~~---~~~~-~~--~~~~~~~--~---~-~~~~---------~~~~-----~~--- 192 (381)
T PRK03633 143 TVLGQLLVSKVSTELMSVL-PWVTGL---VLAA-IL--PLLFTRI--L---N-QQAE---------NHDS-----TS--- 192 (381)
T ss_pred HHHHHHHHhcccccccchH-HHHHHH---HHHH-HH--HHHHhcc--c---C-CCCC---------CCCC-----CC---
Confidence 8888888888765422111 111110 0000 00 0111111 1 0 0000 0000 01
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 007555 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA 464 (598)
Q Consensus 385 ~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~ 464 (598)
++..+++|.++..+...+............++.|..+.|.++...|...+...+++++|.+..+++.+|++..+.
T Consensus 193 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 267 (381)
T PRK03633 193 -----IWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLV 267 (381)
T ss_pred -----HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHH
Confidence 111345555553322222221111123345667887889999999999999999999999999999999998765
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-
Q 007555 465 GAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE- 543 (598)
Q Consensus 465 g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~- 543 (598)
...+..... .+..... ... ......++.+. +....-...++...+.+|+++++...+......++..
T Consensus 268 l~~~~~~~~----~~~~~~~-~~~--~~~~~~~l~g~-----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~ 335 (381)
T PRK03633 268 LRVQVFVVI----LGSIAML-SQA--AMAPALFILGA-----AGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSL 335 (381)
T ss_pred HHHHHHHHH----HHHHHHh-hhH--HHHHHHHHHHH-----HHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 544332221 1111111 100 00111111111 1112224455667788899888888887765554443
Q ss_pred HHHHHhhhhccCc
Q 007555 544 SVMLGVAIIANDV 556 (598)
Q Consensus 544 ll~~~~~i~~~~~ 556 (598)
..+.+.|.+.+..
T Consensus 336 igp~~~G~l~~~~ 348 (381)
T PRK03633 336 LGPSFTAMLMQNY 348 (381)
T ss_pred HHHHHHHHHHHHh
Confidence 4555667665543
No 48
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.59 E-value=6.4e-11 Score=131.94 Aligned_cols=359 Identities=13% Similarity=0.006 Sum_probs=196.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccC-----CchHH-HHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHS-----PRIPA-YICL 218 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~-----~Rr~v-mi~~ 218 (598)
++|+...++.-.+.+-+...+..-.+|.+..+.--|...++..... .+|+ ++.++.|.++||+ +|||. +..+
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~-~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~ 87 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLV-GQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLAT 87 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHH-HHHHHHHHHHHcccccCCCCchHHHHHH
Confidence 3344555666666777777788888999866653388888887443 4554 5899999999999 78774 5555
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHH
Q 007555 219 NTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLN 298 (598)
Q Consensus 219 d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~ 298 (598)
.+.-. ++...+.+ ..+ ..+ .+.+++..++.+......+++... .-.| ..++ ++..++|+...
T Consensus 88 ~i~~~----~~~~~~a~---~~~-~~~--l~~l~~~~~l~~~~~a~~~i~~~a-~~~~----~~~~---~~rg~~~~i~~ 149 (491)
T PRK11010 88 QLLLL----VAIAAMGF---LEP-GTQ--LRWLAALAVVIAFCSASQDIVFDA-WKTD----VLPA---EERGAGAAISV 149 (491)
T ss_pred HHHHH----HHHHHHHH---cCC-cch--HHHHHHHHHHHHHHHHHHHHHHHH-HHHH----hcCh---hhhHHHHHHHH
Confidence 43211 11111111 111 111 233444444555555555555433 2234 3443 36889999999
Q ss_pred HHHHHHHHhhHHHHHHHHh-hhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCcc
Q 007555 299 RIDLLCEIAGASLFGILLS-KYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADN 377 (598)
Q Consensus 299 ~id~~~~i~GP~lgGlL~s-~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 377 (598)
....+..++||.+++.+.. ..|......+.+... ++..+ ....+ +++++.++. ++
T Consensus 150 ~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~---ll~~l----~~~~~--~e~~~~~~~------------~~--- 205 (491)
T PRK11010 150 LGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALL---IPCII----ATLLA--PEPTDTIPV------------PK--- 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHH---HHHHH----HHHhc--CCCcccccc------------cc---
Confidence 9999999999999999988 456544333322211 11111 11111 211110000 00
Q ss_pred chhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHH-HHHHHHHHHHHHHHHHH
Q 007555 378 IVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFS-GLCASMGVAATFLSAYL 455 (598)
Q Consensus 378 ~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~-g~gavgGLlGtl~~~~l 455 (598)
+..+...+.++.++++|.....+....++...........++|+. +.|+++.++|... ..+.+++++|+++.+++
T Consensus 206 ---~~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L 282 (491)
T PRK11010 206 ---TLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGIL 282 (491)
T ss_pred ---chhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000112344555666665443333333332211123345666765 5899999999998 47778999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHH
Q 007555 456 VRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTE 535 (598)
Q Consensus 456 ~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~ 535 (598)
.+|+|..|....+...+.... ++......... + ... +...+.+..+..-........+.++.+|++..|+..|+.
T Consensus 283 ~dr~g~~~~l~i~~~l~~l~~-l~~~~l~~~~~-~-~~~--l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~ 357 (491)
T PRK11010 283 MQRLSLFRALMIFGILQGVSN-AGYWLLSITDK-N-LYS--MGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALL 357 (491)
T ss_pred HHHHhHHHHHHHHHHHHHHHH-HHHHHHHhccc-c-HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 999998775543322221111 11011111111 1 111 111111100000112234567788888999999999998
Q ss_pred HHHHHHHH-HHHHHhhhhccC
Q 007555 536 ISVASLVE-SVMLGVAIIAND 555 (598)
Q Consensus 536 ~sl~~~~~-ll~~~~~i~~~~ 555 (598)
+++..+.. ..+.+.|.+.+.
T Consensus 358 ~s~~~lg~~~~~~~~G~l~~~ 378 (491)
T PRK11010 358 SALSAVGRVYVGPVAGWFVEA 378 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 88887664 455566666553
No 49
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.59 E-value=2.1e-11 Score=130.68 Aligned_cols=351 Identities=12% Similarity=0.056 Sum_probs=202.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHH
Q 007555 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (598)
Q Consensus 148 ~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ 227 (598)
+++.++.+.+.-..+..+..--+|.|..+.--|..++++......+...+.+|+.|.+.||++|++..+..-.. .. +
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~--~~-~ 81 (382)
T TIGR00902 5 PFRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLAL--AS-A 81 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH--HH-H
Confidence 45667777777777777766667788866533999999998888999999999999999999985432211100 00 0
Q ss_pred HHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHh
Q 007555 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (598)
Q Consensus 228 ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~ 307 (598)
+. .+ .+.... ++ .+.+++..++.+.......+.... +-++| +++..++-+..+..-.++.++
T Consensus 82 l~-~~-~~~~~~----~~--~~~l~~~~~l~~~~~~~~~p~~~a-l~~~~---------~~~~~~~~g~~~~~~slG~~~ 143 (382)
T TIGR00902 82 IF-AA-AFSAGA----HN--AWLLFIAIGLFALFFSAGMPIGDA-LANTW---------QKQFGLDYGKVRLIGSAAFII 143 (382)
T ss_pred HH-HH-HHHHhh----hh--HHHHHHHHHHHHHHHccchhHHHH-HHHHH---------HHHcCCCccHHHHHHHHHHHH
Confidence 00 11 111111 11 233333333333333322222221 11221 124456778888888999999
Q ss_pred hHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHH
Q 007555 308 GASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIK 387 (598)
Q Consensus 308 GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 387 (598)
||.++|.+...+|.......... . ..... ....+ .+.+++ +++++ ++ + ... .
T Consensus 144 g~~l~g~l~~~~g~~~~f~~~~~---~-~~~~~----~~~~~-~~~~~~--~~~~~------~~--~-----~~~----~ 195 (382)
T TIGR00902 144 GSALFGGLIGMFDEQNILAILTA---G-LAFML----IGFLI-KPTIPP--KDAIP------ED--E-----SQG----D 195 (382)
T ss_pred HHHHHHHHHHHcChhHHHHHHHH---H-HHHHH----HHHHc-CCCCCC--Ccccc------cc--c-----ccc----c
Confidence 99999999998886543222111 1 11011 11111 121111 00000 00 0 000 1
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 007555 388 LGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA 467 (598)
Q Consensus 388 eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~ 467 (598)
+.++.++|+|.+...+....+.......+.+..+.|+++.|+++..+|...+.++++.+++.+..+++.||+|..+...+
T Consensus 196 ~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~ 275 (382)
T TIGR00902 196 SAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLI 275 (382)
T ss_pred hhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHH
Confidence 23455778887765444444333222345566777888899999999999999999999999999999999998876654
Q ss_pred HHHHHHHHHHHHHHHH-hhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH--HH
Q 007555 468 GLIFQASLLAMAVAVY-WSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV--ES 544 (598)
Q Consensus 468 ~l~~q~~~L~~~v~~~-~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~--~l 544 (598)
+.... ......+ ...+ .+.+.....+-.+....+.....+++|+. |++++++..++.+++.++. ..
T Consensus 276 ~~~~~----~~~~~~~~~~~~------~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~ 344 (382)
T TIGR00902 276 SAIAC----VGRWAIIGAIEA------FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAI 344 (382)
T ss_pred HHHHH----HHHHHHHHhHhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHH
Confidence 43322 1111111 1111 11111122222233335667788899988 9999999999987665554 34
Q ss_pred HHHHhhhhccCcch
Q 007555 545 VMLGVAIIANDVSH 558 (598)
Q Consensus 545 l~~~~~i~~~~~~~ 558 (598)
++.+.|.+.+....
T Consensus 345 g~~~~G~l~~~~g~ 358 (382)
T TIGR00902 345 FTAFAGFIYPTLGA 358 (382)
T ss_pred HHHHHHHHHHhccH
Confidence 56777877776654
No 50
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.57 E-value=3.8e-11 Score=129.84 Aligned_cols=352 Identities=13% Similarity=0.094 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccC----CchH-HHHHHHHHHHHHHHH
Q 007555 155 CCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS----PRIP-AYICLNTVQAAAQLL 228 (598)
Q Consensus 155 gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~----~Rr~-vmi~~d~~q~~~v~l 228 (598)
|++-......+...=++.|..+..+ |+..+|+...+..+...+..|+.|.+.||. .||| .+..+-+.- ++
T Consensus 7 g~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~----~i 82 (437)
T TIGR00792 7 GDFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPF----SI 82 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHH----HH
Confidence 4444555555555556677777788 999999999999999999999999999984 4434 554443221 11
Q ss_pred HHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhh
Q 007555 229 SAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (598)
Q Consensus 229 s~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~G 308 (598)
+..+ .+. .+..+........++..++.+....+.++.+.. +.+.+.++ +++..++++..+....+..+++
T Consensus 83 ~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-----l~~~~~~~--~~~R~~~~~~~~~~~~~g~~l~ 152 (437)
T TIGR00792 83 VLVL-LFT--TPDFSATGKLVYAYITYILLGLFYSFVNIPYWS-----LVPAITLD--PRERESLSTFRRFGATLGGLLV 152 (437)
T ss_pred HHHH-HHh--CCCCCcchHHHHHHHHHHHHHHHHHhhcccHhh-----CcccccCC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 221 111001111111222233445555555544433 23335542 3478899999888888888888
Q ss_pred HHHHHHHHhhhch---hHHHHHHHH-HHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHH
Q 007555 309 ASLFGILLSKYEP---VTCLKFAAG-LIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (598)
Q Consensus 309 P~lgGlL~s~~~~---~~~l~~~~~-~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (598)
+.+++.++...+. .......+. ..+...+..+ .....+ ++ ++++.++ ++ ++ + .
T Consensus 153 ~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~---~~~~~~--~e--~~~~~~~-------~~-~~-----~---~ 209 (437)
T TIGR00792 153 AVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLI---ICFFGT--KE--RYSEIPK-------NI-EK-----K---L 209 (437)
T ss_pred HHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHH---HHHcCC--Ee--cCCCCCc-------cc-cc-----C---C
Confidence 8877777754331 111111111 1111111111 111111 11 1100000 00 00 0 1
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 007555 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (598)
Q Consensus 385 ~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r 463 (598)
++++.++..+++|.++..+...+++......+....+.|.+. .+ ++...+.+.+...+++++++.+.+++.+|+|..+
T Consensus 210 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~ 288 (437)
T TIGR00792 210 SLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI 288 (437)
T ss_pred CHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 246678888899987765444333322211222233334433 34 5667888888889999999999999999999877
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCC-------CccchhHHHHHH
Q 007555 464 AGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIP-------SSKANLIGTTEI 536 (598)
Q Consensus 464 ~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP-------~~~rGRV~sv~~ 536 (598)
...++.... ..+...++... . .... +....++..++....+....+++++.+| ++.+|+.+|+.+
T Consensus 289 ~~~~~~~~~----~~~~~~~~~~~-~-~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 360 (437)
T TIGR00792 289 LFAGGILLM----VLGYLIFFFAG-S-NLPL--ILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRT 360 (437)
T ss_pred HHHHHHHHH----HHHHHHHHHcc-h-hHHH--HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHH
Confidence 655443221 11111111111 0 1111 1112222333444456666777777765 567899999999
Q ss_pred HHHHHHH-HHHHHhhhh
Q 007555 537 SVASLVE-SVMLGVAII 552 (598)
Q Consensus 537 sl~~~~~-ll~~~~~i~ 552 (598)
...+... +.+.+.+.+
T Consensus 361 ~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 361 FVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 8888775 444444544
No 51
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.57 E-value=6.7e-12 Score=138.28 Aligned_cols=392 Identities=13% Similarity=0.030 Sum_probs=204.2
Q ss_pred CCCCChhhhhhhccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeec
Q 007555 128 IPVLSEEEQNALAATPAHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMD 207 (598)
Q Consensus 128 ~~~~~~~~~~~~~~~~~r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvD 207 (598)
.+=++|+|+.... .-.+-+.+..++.+.++..+.......+.|-+..+..-|..+.++...+..+.+.+..|+.|.++|
T Consensus 11 ~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~D 89 (467)
T PRK09556 11 TLDLPLEVQRKMW-FKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYAD 89 (467)
T ss_pred ccCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhh
Confidence 3345666655442 000112344566666666667777888888766554449999999999999999999999999999
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCch
Q 007555 208 HSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRP 287 (598)
Q Consensus 208 R~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~ 287 (598)
|++|||++..+-++-.+...+. +.+.. ... .+ .+.+++.-++.|..+.++.++.... -.+|.| ++
T Consensus 90 r~g~r~~l~~~~~~~~~~~~~~-~~~~~--~~~---~~--~~~l~~~r~l~G~~~~~~~~~~~~~-i~~~~~----~~-- 154 (467)
T PRK09556 90 GKNTKQFLPFLLILSAICMLGF-GASLG--SGS---VS--LGLMIALWALSGFFQSTGGPCSYST-ITRWTP----RR-- 154 (467)
T ss_pred ccCccchHHHHHHHHHHHHHHH-HHHHh--ccc---ch--HHHHHHHHHHHHHHHhccchHHHHH-HHHHcC----cc--
Confidence 9999999876654322221111 11000 010 11 2344454556676666666555443 345544 22
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhh---chhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--cccc
Q 007555 288 IALAKANAVLNRIDLLCEIAGASLFGILLSKY---EPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAK--CSQS 362 (598)
Q Consensus 288 ~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~---~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~--~~~~ 362 (598)
+..++++.......+..++||.++..+.... +....+.+.. +..++..++ .+...+ +.+++.+ +.++
T Consensus 155 -~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g---~~~~~~~i~-~~~~~~---~~p~~~~~~~~~~ 226 (467)
T PRK09556 155 -KRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPS---IIALIIGFI-GLRYGS---DSPEELGWGKAEE 226 (467)
T ss_pred -ceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHH---HHHHHHHHH-HHHhCC---CChhhcCCCChhh
Confidence 5678888887777777777777776655432 1111111111 111111111 111111 1111100 0000
Q ss_pred ccCCCCCCCCCCCccchhhhHHHHHHH-HHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHH
Q 007555 363 CCRTSNEGPVPDADNIVDVGIEAIKLG-WKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGL 440 (598)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~i~eG-~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~ 440 (598)
..++. ...++..+..++ . ..++- .++.+++|.+........+.+.....+...++.|+.+ .|+++.+.+.....
T Consensus 227 ~~~~~--~~~~~~~~~~~~-~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~ 302 (467)
T PRK09556 227 IFGEP--ISEEDKETESTD-M-TKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTL 302 (467)
T ss_pred cccCc--cchhhhcccccc-C-cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHH
Confidence 00000 000000000000 0 01121 2346788766543333222222212344567778875 79999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhh
Q 007555 441 CASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQ 520 (598)
Q Consensus 441 gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q 520 (598)
..+++++|.++.+++.+|++..+........... ......+.... +.....+. ..+.+++.............
T Consensus 303 ~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~---~~~~G~~~~~~~~~~~~~~~ 375 (467)
T PRK09556 303 FEIGALVGSLLWGWLSDLANGRRALVACIALALI--IFTLGVYQHAT--SEYMYLAS---LFALGFLVFGPQLLIGVAAV 375 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHH--HHHHHHHHhcC--cHHHHHHH---HHHHHHHHhhHHHHHHHHHH
Confidence 9999999999999999999876554332211111 11111111111 11111111 11111111111112234566
Q ss_pred ccCCCccchhHHHHHHHHHHH-H-HHHHHHhhhhcc
Q 007555 521 TGIPSSKANLIGTTEISVASL-V-ESVMLGVAIIAN 554 (598)
Q Consensus 521 ~~VP~~~rGRV~sv~~sl~~~-~-~ll~~~~~i~~~ 554 (598)
+..|++.+|++.|+.++..++ . ...+++.|.+.+
T Consensus 376 ~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 376 GFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 999999999999999999885 3 356677777766
No 52
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.55 E-value=2.3e-11 Score=131.03 Aligned_cols=354 Identities=12% Similarity=0.036 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCc
Q 007555 165 LWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSS 244 (598)
Q Consensus 165 i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~ 244 (598)
....++|.+..+..-|..+++....+..+...+.+|+.|.+.||++||+++..+-.+-.+. .+...+..
T Consensus 27 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~------~~~~~~a~----- 95 (393)
T PRK09705 27 SVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVG------ALMRELYP----- 95 (393)
T ss_pred ccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHH------HHHHHHCc-----
Confidence 3445566655544338888999999999999999999999999999999998776543222 11111111
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhh-chhH
Q 007555 245 SMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY-EPVT 323 (598)
Q Consensus 245 ~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~-~~~~ 323 (598)
+ .+.+++.-++.|.......+..... .++|. ++ +..++++...........+||.+++.+.... +...
T Consensus 96 ~--~~~ll~~r~l~Gig~~~~~~~~~~~-~~~~~----~~----~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 96 Q--SALLLSSALLGGVGIGIIQAVMPSV-IKRRF----QQ----RTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred c--hHHHHHHHHHHHhHHHHHhhhhhHH-HHHHc----cc----cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 1 2344555555566555555444332 23432 22 4578899888878888888888888887754 4332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHH-H
Q 007555 324 CLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-S 402 (598)
Q Consensus 324 ~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~-~ 402 (598)
...+..... .. .++. +... .++ +++++ + + ++ ... +..+++|..+. .
T Consensus 165 ~~~~~~~~~---~~-~~~~-~~~~--~~~---~~~~~-~--------~--~~----~~~--------~~~l~~~~~~~l~ 211 (393)
T PRK09705 165 TLAWWALPA---VV-ALFA-WWWQ--SAR---EVASS-H--------K--TT----TTP--------VRVVFTPRAWTLG 211 (393)
T ss_pred HHHHHHHHH---HH-HHHH-HHHH--hcC---CCccc-c--------C--CC----cCC--------cccccCHhHHHHH
Confidence 221111111 11 1110 1111 011 11100 0 0 00 000 01123333322 2
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 007555 403 LAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV 482 (598)
Q Consensus 403 l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~ 482 (598)
+...+.++.. ..+...++.|+.+.|+++...|...+..++++++|.++.+++.+|.+..+....+.... ..+...
T Consensus 212 ~~~~~~~~~~-~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~----~~~~~~ 286 (393)
T PRK09705 212 VYFGLINGGY-ASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQ----LVGFCG 286 (393)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH----HHHHHH
Confidence 2222222211 12334566777778999999999999999999999999999999998766655443221 112111
Q ss_pred -HhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccCcchhH
Q 007555 483 -YWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIANDVSHFG 560 (598)
Q Consensus 483 -~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~~~~f~ 560 (598)
.+... .....+.++.++ ..|. .+........|...|++.+|+++|..+++..... ..+.+.|.+.+....+.
T Consensus 287 ~~~~~~--~~~~~~~~l~g~---g~g~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 360 (393)
T PRK09705 287 FIWLPL--QLPVLWAMVCGL---GLGG-AFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYL 360 (393)
T ss_pred HHHccc--hHHHHHHHHHHH---hccc-hHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 11111 111111111111 1121 1233344556776678899999999999988775 45566677777655555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC
Q 007555 561 FLATLSLLSVVGAAWMFCHWLLNP 584 (598)
Q Consensus 561 ~l~l~S~~~V~~a~~l~~~~l~~~ 584 (598)
....+.....+.+.........++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 361 MDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc
Confidence 544444433333333334444443
No 53
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.54 E-value=4.2e-11 Score=128.56 Aligned_cols=363 Identities=11% Similarity=0.020 Sum_probs=192.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 146 ~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
+|+|+++...+++=..+-.++.--+|.|+.+..+ |...+++......+..++.+|+.|.++||++|||.++.+.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLV 80 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 4678888888888888888888888999988777 999999999999999999999999999999999999876654322
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
. ......+. .... ..........+..++.+.......++. .+|++-..++ + .+..+..+....++
T Consensus 81 ~---~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~----~-~~~~g~~~~~~~~g 145 (396)
T TIGR00882 81 L---FAPFFIYV-FGPL-LQSNILVGAIVGGLYLGFVFSAGAGAI-----EAYIEKVSRN----S-NFEYGKARMFGCVG 145 (396)
T ss_pred H---HHHHHHHH-hhhH-HHHHHHHHHHHHHHHHHHHhccchhhH-----HHHHHHhhhh----c-ccccchhhhhcccH
Confidence 1 11110111 0000 000000011111222233222222222 1232212111 1 12345677777889
Q ss_pred HHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHH
Q 007555 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (598)
Q Consensus 305 ~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (598)
..+||.++|.+... +......+.... ..+..+ ..... .++.+++++ .+.. .+.++. +...+
T Consensus 146 ~~~g~~~~g~l~~~-~~~~~f~~~~~~---~~~~~~----~~~~~-~~~~~~~~~-~~~~-----~~~~~~----~~~~~ 206 (396)
T TIGR00882 146 WALCASIAGILFSI-DPQIVFWLGSGF---ALILML----LLMFA-KPKAPSSAT-VANA-----LGANAS----AFSLK 206 (396)
T ss_pred HHHHHHHHhhhhcc-CchHHHHHHHHH---HHHHHH----HHHHh-CCCCchhhh-hhcc-----cccccC----CCCHH
Confidence 99999999988763 543322222111 111111 11111 111111000 0000 000000 00111
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh----cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007555 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ----RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (598)
Q Consensus 385 ~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~----lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg 460 (598)
.++.++++|.++..+............+...++.|..+ .+.+...+|...+..++...++.+..+++.+|+|
T Consensus 207 ----~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g 282 (396)
T TIGR00882 207 ----LALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIG 282 (396)
T ss_pred ----HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 23456677765433222222111111233345556553 3666778899999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH-hhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHH-HHHH
Q 007555 461 ILKAGAAGLIFQASLLAMAVAVY-WSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTT-EISV 538 (598)
Q Consensus 461 ~~r~g~~~l~~q~~~L~~~v~~~-~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv-~~sl 538 (598)
..+....+.. +..++...+ ...++ ..+ .....+..++..........+.++..|++.++...+. .+..
T Consensus 283 ~~~~l~~~~~----l~~l~~~~~~~~~~~----~~~--~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~ 352 (396)
T TIGR00882 283 AKNALLIAGT----IMSVRIIGSSFATTA----LEV--VILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFA 352 (396)
T ss_pred cchhHHHHHH----HHHHHHHHHHhcCCh----HHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHH
Confidence 8776544322 111222221 11111 111 1122233344444444566678888999998887665 3333
Q ss_pred HHHH-HHHHHHhhhhccCc
Q 007555 539 ASLV-ESVMLGVAIIANDV 556 (598)
Q Consensus 539 ~~~~-~ll~~~~~i~~~~~ 556 (598)
..+. .+.+.+.|.+.+..
T Consensus 353 ~~lg~~~~~~l~G~l~~~~ 371 (396)
T TIGR00882 353 KQLAMIFLSTLAGNMYDSI 371 (396)
T ss_pred HHHHHHHHHHhHHHHHHhc
Confidence 3333 34556667776654
No 54
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.52 E-value=1.4e-11 Score=132.61 Aligned_cols=375 Identities=12% Similarity=0.015 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC--------hhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHH
Q 007555 155 CCLAGNLVEQLWNFAWPSAIALLHPS--------LLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQ 226 (598)
Q Consensus 155 gq~lS~~G~~i~~fAlpL~v~~lt~S--------~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v 226 (598)
+.++..+...+...++|.......-+ ....++...+..+...+.+|+.|.+.||++||++++.+.++..+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~- 114 (481)
T TIGR00879 36 GGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIG- 114 (481)
T ss_pred HHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHH-
Confidence 33444555666666777666554434 788899999999999999999999999999999988776543222
Q ss_pred HHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHH
Q 007555 227 LLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEI 306 (598)
Q Consensus 227 ~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i 306 (598)
+.+..+. .. ....+.+++.-++.|.......+.....+ .| ..++ ++..++.+..+....+..+
T Consensus 115 ---~~~~~~~-~~-----~~~~~~~~~~r~l~G~~~~~~~~~~~~~i-~~----~~~~---~~r~~~~~~~~~~~~~G~~ 177 (481)
T TIGR00879 115 ---AILMGLA-AF-----ALSVEMLIVGRVLLGIGVGIASALVPMYL-SE----IAPK---ALRGALTSLYQLAITFGIL 177 (481)
T ss_pred ---HHHHHHh-cc-----ccchHHHHHHHHHHHhhhhHHHhHHHHHH-Hc----cCCh---hhhhhhhhHHHHHHHHHHH
Confidence 1111111 11 11112344444555555444444433322 34 3333 2678899999988899999
Q ss_pred hhHHHH---HHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--ccccccc--cccCCCCCCCCCCCccch
Q 007555 307 AGASLF---GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVL--DRAKCSQ--SCCRTSNEGPVPDADNIV 379 (598)
Q Consensus 307 ~GP~lg---GlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l--~~~~~~~--~~~~~~~~~~~~~~~~~~ 379 (598)
+||.++ +.+....+......+.....+. ..+..+.+.. .|.. .+.+.++ +..++.+..+.++ ....
T Consensus 178 ~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~----~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 250 (481)
T TIGR00879 178 VAYGFGSGKVSLNNTLGWRIPLGLQLIPAGL----LFLGLFFLPE--SPRWLVGKGRVEEARKSLARLRGTSGED-KELL 250 (481)
T ss_pred HHHHHHHHhhcCCCCccHHHHHHHHHHHHHH----HHHHHhcCCC--ChHHHHHcCChHHHHHHHHHHhCCCCCc-HHHH
Confidence 999998 5544444433322221111111 1111011110 0000 0000000 0000000000000 0000
Q ss_pred h--hhHHHH--------HHHHHHHhcC--CchHHHHHHHHHH----HHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHH
Q 007555 380 D--VGIEAI--------KLGWKEYMQQ--PVLPASLAYVLLC----LNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCAS 443 (598)
Q Consensus 380 ~--~~~~~i--------~eG~~~~~~~--pvll~~l~~~lL~----~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gav 443 (598)
+ ...+.. +..|+..++. +.....+....+. +..........+.+..+.|++....+.......+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 330 (481)
T TIGR00879 251 DELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGA 330 (481)
T ss_pred HHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 0 000000 0012222221 1122222221111 1110011122333445689999888888899999
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhccccc---chhHHHHHHHHHHHhhhhhhhhhhhhhhhh
Q 007555 444 MGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQ---QNPLLFFLCLIVLSRLGHMSYDIVGAQILQ 520 (598)
Q Consensus 444 gGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~---~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q 520 (598)
++++|.++.+++.+|+|..+....+......++.............. .....+....+.....+ ..+......+.+
T Consensus 331 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 409 (481)
T TIGR00879 331 VNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFA-MGWGPVPWVIVS 409 (481)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHH-ccccCeehhhhh
Confidence 99999999999999999776655443222111111110001111100 01111111111111111 122344456679
Q ss_pred ccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccC
Q 007555 521 TGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAND 555 (598)
Q Consensus 521 ~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~ 555 (598)
+..|++.||+..|+.++..++.. ..+.+.+.+.+.
T Consensus 410 ~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 410 EIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998888775 444555555443
No 55
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.51 E-value=5.7e-10 Score=119.56 Aligned_cols=352 Identities=17% Similarity=0.058 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHH--HHHHHHHcccccce-eeccCCchHHHHHHHHHHHHHHHHH
Q 007555 153 YACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFF--SKLILIVGGPLVGK-LMDHSPRIPAYICLNTVQAAAQLLS 229 (598)
Q Consensus 153 ~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~--~~Lp~lL~gp~aGv-lvDR~~Rr~vmi~~d~~q~~~v~ls 229 (598)
..-.+.+-+.-.+..-.+|.|+-+..-|....|+++.. -.+-..+.+|+.+. ..||++|||..+..- |....+..
T Consensus 7 ~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~--~~~~~~~~ 84 (390)
T TIGR02718 7 GLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM--QCLVSACL 84 (390)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH--HHHHHHHH
Confidence 33345556667788888999998774499999998533 35556789999966 689998888754331 22111101
Q ss_pred HHHHHHHhhhccCCccchHHHHHH-HHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhh
Q 007555 230 AAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (598)
Q Consensus 230 ~~~l~~~~~~~~~~~~~l~~~l~v-v~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~G 308 (598)
. .... ... ... ...|+. ...+.+......+++.... .+.-. ++++....|+.......+..++|
T Consensus 85 --~-~~~~-~~~-~~~--~~~~~~~~~~~~~~~~a~~d~~~d~~-----~~~~~---~~~~~~~~~~~~~~g~~lG~~~g 149 (390)
T TIGR02718 85 --A-SLAL-VGP-DVA--GAGWAVGLLACASLASATQDIATDGM-----AAEHF---NGRTLAKGNAVQIAGVMIGFFGG 149 (390)
T ss_pred --H-HHHc-CCc-chh--hHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhC---CHhhhhHHHHHHHHHHHHHHHHH
Confidence 1 1110 111 001 011222 2222223333333333211 11111 22355666766665556667777
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHH
Q 007555 309 ASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKL 388 (598)
Q Consensus 309 P~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~e 388 (598)
+.++|.+.+..|......+..+..+... . ..... .++ ++++++ .+ +.. ..
T Consensus 150 ~~~~~~l~~~~gw~~~f~~~a~l~~~~~---~----~~~~~-~~~---~~~~~~----------~~-----~~~----~~ 199 (390)
T TIGR02718 150 GAGTLVLFGKFGQRPAFLLVACVPLASL---V----CVLWL-KDR---AVASPE----------AP-----LAR----RA 199 (390)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHH---H----HHHHc-CCC---CcCccc----------cc-----hhh----HH
Confidence 7777778877776543333322221111 1 11111 110 000000 00 010 12
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhHHHHH
Q 007555 389 GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCA-SMGVAATFLSAYLVRRLGILKAGAA 467 (598)
Q Consensus 389 G~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~ga-vgGLlGtl~~~~l~rrlg~~r~g~~ 467 (598)
.++.++|+|.++..+...+++........+...+|+++.|+++.++|.+.+..+ +++++|.++.+++.+|+|..|...+
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~ 279 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFIL 279 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 345577888776655554444332123445667788889999999999998876 4677899999999999998877665
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCC-CccchhHHHHHHHHHHHHH-HH
Q 007555 468 GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIP-SSKANLIGTTEISVASLVE-SV 545 (598)
Q Consensus 468 ~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP-~~~rGRV~sv~~sl~~~~~-ll 545 (598)
+....................+ ........ .....++.............+.++ ++.+|+.++..+++.++.. +.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g 356 (390)
T TIGR02718 280 GVGLAGSLALLWFAQAAFWLAP-GIAVAWSC--SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIA 356 (390)
T ss_pred HHHHHHHHHHHHHHHHHcccCC-cHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHH
Confidence 4433211111111110000000 11111111 111111111222333334333455 4899999999999988775 45
Q ss_pred HHHhhhhcc
Q 007555 546 MLGVAIIAN 554 (598)
Q Consensus 546 ~~~~~i~~~ 554 (598)
+.+.|.+.+
T Consensus 357 ~~~~G~l~~ 365 (390)
T TIGR02718 357 SSIAGYLTD 365 (390)
T ss_pred HHHHHHHHH
Confidence 555566654
No 56
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.51 E-value=3.3e-11 Score=126.68 Aligned_cols=348 Identities=11% Similarity=-0.003 Sum_probs=189.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 147 r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
|.+...+.+.+++..+...+...+|.++.+..+ |....++...+..+..++.+++.|.+.||++||++++.+.++..+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 1 RNLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIP 80 (366)
T ss_pred CchHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 457788999999988888888888877777778 9999999999999999999999999999999999988776543222
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~ 305 (598)
..+..+.. .+ .+.+++.-++.|.......++. ..+ .|| .++ ++..++++.......++.
T Consensus 81 ----~~~~~~~~------~~--~~~~~~~~~~~g~~~~~~~~~~-~~~-~~~----~~~---~~r~~~~~~~~~~~~~g~ 139 (366)
T TIGR00886 81 ----CLWAGLAV------QS--YSVLLLLRLFIGIAGGSFASCM-PWI-SFF----FPK---KIQGTALGLAAGWGNMGG 139 (366)
T ss_pred ----HHHHHHHh------hh--HHHHHHHHHHHHHhchhhHhHH-HHH-HHh----cCH---hhhhHHHHHHHHHhHHHH
Confidence 11111111 01 1233333344444433333322 222 333 333 367889999888888888
Q ss_pred HhhHHHHHHHHhhh----------chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCC
Q 007555 306 IAGASLFGILLSKY----------EPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDA 375 (598)
Q Consensus 306 i~GP~lgGlL~s~~----------~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~ 375 (598)
.+||.+++.+.... +......+..+ +...+...+. +... ++.+++++++ ++.+.. . ..
T Consensus 140 ~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~~~-~~~~---~~~~~~~~~~-~~~~~~--~---~~ 207 (366)
T TIGR00886 140 GVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPA--GILLLPALLI-FFVG---ADTPPGKPAT-GKLSFK--G---AR 207 (366)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccchhHHHHH--HHHHHHHHHH-HHhc---ccCCcccccc-hhcccc--c---cc
Confidence 88888888776632 22211111100 1111111110 1111 1111110000 000000 0 00
Q ss_pred ccchhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 007555 376 DNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAY 454 (598)
Q Consensus 376 ~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~ 454 (598)
....+ ++ .+.++..+++|.++.......+++.....+...++.|+.+ .|+++.+.|.+.....+++++|.++.++
T Consensus 208 ~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 283 (366)
T TIGR00886 208 WSVGT---GA-LGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGA 283 (366)
T ss_pred ccccc---hh-HHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccch
Confidence 00000 11 1133345666665543333333322212445566667764 6999999999999999999999999999
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhccccc-chhHH--HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhH
Q 007555 455 LVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQ-QNPLL--FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLI 531 (598)
Q Consensus 455 l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~-~~~~~--~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV 531 (598)
+.+|+|..+....+.... ..+...+.....+. ..... .+....+.... .......+..+..| +.+|++
T Consensus 284 l~~r~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~-~~~g~~ 354 (366)
T TIGR00886 284 ISDRLGGARKLLMSFLGV----AMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGA----GNGSTFALVPHIFR-RATGAV 354 (366)
T ss_pred HHHhhccchhHHHHHHHH----HHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcc----ccchhhhcchhhch-hhcccH
Confidence 999998766554433211 11111111111100 11111 11111111221 22233344555555 699999
Q ss_pred HHHHHHHHH
Q 007555 532 GTTEISVAS 540 (598)
Q Consensus 532 ~sv~~sl~~ 540 (598)
.|+.+++.+
T Consensus 355 ~g~~~~~~~ 363 (366)
T TIGR00886 355 SGLVGAIGN 363 (366)
T ss_pred HHHHHHhcc
Confidence 999888765
No 57
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.50 E-value=9.7e-11 Score=127.93 Aligned_cols=357 Identities=12% Similarity=0.033 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCc
Q 007555 166 WNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSS 244 (598)
Q Consensus 166 ~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~ 244 (598)
+.+..|.+. + .+ |..+.+....+..+...+..++.|.+.||++||+++..+.++..+. .......... ..
T Consensus 46 ~~~~~p~~~-~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~----~~~~~~~~~~---~~ 116 (438)
T TIGR00712 46 FALAMPYLV-E-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAV----MLLMGFVPWA---TS 116 (438)
T ss_pred HHhhhHHHH-H-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHH----HHHHhccccc---cc
Confidence 455666443 4 37 9999999999999999999999999999999999887765443222 1110110000 01
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhh-hchhH
Q 007555 245 SMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-YEPVT 323 (598)
Q Consensus 245 ~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~-~~~~~ 323 (598)
+ .+.+++..++.+.......+.....+. | ..+++ +..++++.......++..++|.+.+.+... .+...
T Consensus 117 ~--~~~l~~~~~l~g~~~g~~~~~~~~~i~-~----~~~~~---~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~ 186 (438)
T TIGR00712 117 S--IAIMFVLLFLNGWFQGMGWPPCGRTMV-H----WWSQS---ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHA 186 (438)
T ss_pred h--HHHHHHHHHHHHHHhhcchHHHHHHHH-H----hcCcc---cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHH
Confidence 1 122333344455544444333333222 3 33332 677999999988889998888887765542 34332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-ccccccCCCCCCCCCCCccchhhhHHHHHHHH-HHHhcCCchHH
Q 007555 324 CLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAK-CSQSCCRTSNEGPVPDADNIVDVGIEAIKLGW-KEYMQQPVLPA 401 (598)
Q Consensus 324 ~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~-~~~~~~pvll~ 401 (598)
...+... .+++..++. +...+ +.++.++ ++.++.+++..++. . ++ .+.-+ +.++-+ +..+++|.+..
T Consensus 187 ~f~~~~~---~~~i~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~-~~~~~~~~~~~~~~~~~~ 255 (438)
T TIGR00712 187 ALYFPAI---CAIIVALFA-FAMMR---DTPQSCGLPPIEEYRNDYPDDY-N-EK-AEQEL-TAKEIFMQYVLPNKLLWY 255 (438)
T ss_pred HHHHHHH---HHHHHHHHH-HHhcc---CCHHhcCCCCchhccccccccc-c-cc-ccccc-chHHHHHHHHccCchHHH
Confidence 2222211 111111111 11111 1111000 00000000000000 0 00 00000 112222 34678887765
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 007555 402 SLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAV 480 (598)
Q Consensus 402 ~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v 480 (598)
........+.....+....+.|+++ .|+++...|+.....++++++|.++.+++.+|++..+....+...... ...++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~-~~~~~ 334 (438)
T TIGR00712 256 IAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTL-VTIAV 334 (438)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHH-HHHHH
Confidence 4443333222212344566778875 699999999999999999999999999999998543322222111101 11111
Q ss_pred HHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH-H-HHHHHhhhhccCc
Q 007555 481 AVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV-E-SVMLGVAIIANDV 556 (598)
Q Consensus 481 ~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~-~-ll~~~~~i~~~~~ 556 (598)
..++.....+...... .++..+++.+.-........++..|++.||+..|+.++..+.. . ..+++.|.+.+..
T Consensus 335 ~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~ 409 (438)
T TIGR00712 335 IVYWMNPAGNPLVDMI---CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF 409 (438)
T ss_pred HHHHhcCCCchHHHHH---HHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc
Confidence 2222211101111111 1111111211111222345678899999999999998876654 2 3456667666543
No 58
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.50 E-value=4.3e-11 Score=125.74 Aligned_cols=137 Identities=16% Similarity=0.038 Sum_probs=83.8
Q ss_pred hhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhH
Q 007555 416 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 494 (598)
Q Consensus 416 f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~ 494 (598)
....++.|.. +.|.++...|...+...++++++..+.+++.+|+|..+...........+ ............ ..
T Consensus 238 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~ 312 (394)
T TIGR00883 238 ITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALL-AVPLLMALLDSG----SF 312 (394)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH-HHHHHHHHhcCC----ch
Confidence 3445666775 57999999999999999999999999999999999766544222111111 000111111111 11
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHH-HH-HHHHHhhhhccCcc
Q 007555 495 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-VE-SVMLGVAIIANDVS 557 (598)
Q Consensus 495 ~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~-~~-ll~~~~~i~~~~~~ 557 (598)
..+.....+..++...+..+.++++++.+|++.||+.++....+.+. .. +.+.+.+.+.+..+
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 313 TLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 11111222223333345677889999999999999999986555433 22 55666676666544
No 59
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.49 E-value=1.1e-10 Score=127.39 Aligned_cols=343 Identities=12% Similarity=0.043 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccC-CchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007555 164 QLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS-PRIPAYICLNTVQAAAQLLSAAMIIHAHTVIP 241 (598)
Q Consensus 164 ~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~-~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~ 241 (598)
.+|-==++.++.+..+ |..+.|++..+..+..++.+|+.|.++||+ +||+++..+.+...+ .........
T Consensus 19 ~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~------~~~~~~~~~-- 90 (418)
T TIGR00889 19 GSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGAL------LLFFAAQVT-- 90 (418)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH------HHHHHHHhc--
Confidence 3343344556666677 999999999999999999999999999998 557777755543211 111111111
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhch
Q 007555 242 TSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEP 321 (598)
Q Consensus 242 ~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~ 321 (598)
+ .+.+++..++.++......+..+. +..+++... +. +..+...+.|..-.++..+||.++|.+ +..+.
T Consensus 91 ---~--~~~~~~~~~l~~~~~~~~~~~~~~-l~~~~~~~~-g~----~~~~~~~~~r~~G~lG~~ig~~l~g~l-~~~~~ 158 (418)
T TIGR00889 91 ---T--PAGMFPVLLANSLAYMPTIALTNS-ISYANLPQA-GL----DVVTDFPPIRVMGTIGFIAAMWAVSLL-DIELS 158 (418)
T ss_pred ---C--HHHHHHHHHHHHHHHccHHHHHHH-HHHHHHhhc-CC----CchhcCCCeeeehhHHHHHHHHHHHHh-cccch
Confidence 1 233444444444432211111111 101111000 00 011111112222346788888888877 32211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHH
Q 007555 322 VTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA 401 (598)
Q Consensus 322 ~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~ 401 (598)
........+ ..++ .. .+...+ |+.+ ++++ ++ + .+..++.+.+++..+|+|.+..
T Consensus 159 ~~~f~~~~~---~~~~-~~---~~~~~~--~e~~--~~~~--------~~--~-----~~~~~~~~~~~~~~~k~~~~~~ 212 (418)
T TIGR00889 159 NIQLYITAG---SSAL-LG---VFALTL--PDIP--VAKS--------TA--K-----MSIKVMLGLDAFILFKNKRMAI 212 (418)
T ss_pred hHHHHHHHH---HHHH-HH---HHHhcC--CCCC--CCcc--------cc--c-----cCHHHHhhhhHHHHhcCCCeee
Confidence 111111111 1111 11 111121 2111 0000 00 0 0111222234555788887655
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhcCCC--------hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 007555 402 SLAYVLLCLNVVLTPGSLMTAFLTQRGLN--------PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQA 473 (598)
Q Consensus 402 ~l~~~lL~~~vll~f~~l~~~yl~~lg~s--------~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~ 473 (598)
.+...++............+.|+.+.|.+ ....|...+..+++++++.+..+++.+|+|..+....+....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~- 291 (418)
T TIGR00889 213 FFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAW- 291 (418)
T ss_pred HHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH-
Confidence 44333332211112223445566665644 367899999999999999999999999999877765544322
Q ss_pred HHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHH-HHHHH-HHHHHHhhh
Q 007555 474 SLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEIS-VASLV-ESVMLGVAI 551 (598)
Q Consensus 474 ~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~s-l~~~~-~ll~~~~~i 551 (598)
..+...+..... .......+....++..++...++.....++.+..|+++||+.+|..+. ...+. ..++.+.|.
T Consensus 292 ---~v~~~l~~~~~~-~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~ 367 (418)
T TIGR00889 292 ---ALRFGFFAYGDP-EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGV 367 (418)
T ss_pred ---HHHHHHHHHcCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 111111111110 011111122222233333334566778889999999999999999974 33333 356677777
Q ss_pred hccCcc
Q 007555 552 IANDVS 557 (598)
Q Consensus 552 ~~~~~~ 557 (598)
+.+...
T Consensus 368 l~~~~g 373 (418)
T TIGR00889 368 MVEKMF 373 (418)
T ss_pred HHHHhc
Confidence 776643
No 60
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.48 E-value=2.9e-10 Score=125.82 Aligned_cols=349 Identities=8% Similarity=-0.012 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeec----cCCc-hHHHHHHHHHHHHHHH
Q 007555 154 ACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMD----HSPR-IPAYICLNTVQAAAQL 227 (598)
Q Consensus 154 ~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvD----R~~R-r~vmi~~d~~q~~~v~ 227 (598)
.|++-..+...+...=++.|..+..+ |+..+|+.-++..+--.+..|+.|.+.| ||+| |+.|..+-+.. +
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~----~ 88 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLAN----S 88 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHH----H
Confidence 34444444444444446677778888 9999999998888888999999999999 5576 55665554322 1
Q ss_pred HHHHHHHHHhhhccCCccchHHHHHH-HHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHH
Q 007555 228 LSAAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEI 306 (598)
Q Consensus 228 ls~~~l~~~~~~~~~~~~~l~~~l~v-v~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i 306 (598)
++..+ ++ .. +..+......++. ..++....-++.++.+.. +.+.+.++ +++.++.++..+....+..+
T Consensus 89 i~~~l-lf--~~-p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~a-----l~~~lt~~--~~eR~~l~~~~~~~~~ig~~ 157 (473)
T PRK10429 89 VVLFL-LF--SA-HLFEGTAQYVFVCVTYILWGMTYTIMDIPFWS-----LVPTLTLD--KREREQLVPYPRFFASLAGF 157 (473)
T ss_pred HHHHH-HH--cC-CCCCccHHHHHHHHHHHHHHHHHHHHcchHHh-----hhHHhCCC--HHHHHHHHHHHHHHHHHHHH
Confidence 22112 22 11 1111111112222 223344555555555543 34447643 45788999986666666667
Q ss_pred hhHHHHHHHHhhhch---hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhH
Q 007555 307 AGASLFGILLSKYEP---VTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (598)
Q Consensus 307 ~GP~lgGlL~s~~~~---~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (598)
+++.++..++..+|. ............+......+ ...... ++ +++++.+ +..++. +
T Consensus 158 ~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~--~~~~~~--~e--~~~~~~~-------~~~~~~----~--- 217 (473)
T PRK10429 158 VTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTI--ITLRNV--HE--VYSSDNQ-------VSAEGS----H--- 217 (473)
T ss_pred HHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHH--HHHcCc--ee--cCCcccc-------cccccc----C---
Confidence 777666655443331 11111111111111111110 111111 11 1000000 000000 0
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 007555 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (598)
Q Consensus 384 ~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r 463 (598)
..+++.++..++||.++..+...++++.......+.+..|.+....++...+.+.+..+++++++..+.+++.||+|..+
T Consensus 218 ~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~ 297 (473)
T PRK10429 218 LTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI 297 (473)
T ss_pred CCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 12567788888998887655554444332123333444444443335677888888888999999999999999999877
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh--cccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCC--ccchh-----HHHH
Q 007555 464 AGAAGLIFQASLLAMAVAVYWS--GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPS--SKANL-----IGTT 534 (598)
Q Consensus 464 ~g~~~l~~q~~~L~~~v~~~~~--g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~--~~rGR-----V~sv 534 (598)
...++.....+ ..+..+.. ... . ....+....++..++...++....+++++.+|. .+.|+ ++|.
T Consensus 298 ~~~~~~~~~~~---~~~~~~~~~~~~~-~--~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~ 371 (473)
T PRK10429 298 LWAGASIFPVL---SCGVLLLMGLAAP-H--NALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSV 371 (473)
T ss_pred HHHHHHHHHHH---HHHHHHHHhccCc-h--hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHH
Confidence 76544332111 11111111 111 1 111222223334455556677888899999884 34555 8888
Q ss_pred HHHHHHHHH
Q 007555 535 EISVASLVE 543 (598)
Q Consensus 535 ~~sl~~~~~ 543 (598)
....+.+..
T Consensus 372 ~~~~~K~~~ 380 (473)
T PRK10429 372 QTMVVKGGS 380 (473)
T ss_pred HHHHHHHHH
Confidence 888777774
No 61
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.46 E-value=1.7e-09 Score=116.50 Aligned_cols=357 Identities=17% Similarity=0.134 Sum_probs=209.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH---HHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 149 LYALYACCLAGNLVEQLWNFAWPSAI---ALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 149 f~~L~~gq~lS~~G~~i~~fAlpL~v---~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
...-...=.++.|+=...||...=++ +.-.+ |.-.+|..--...+-..+.+|+...+.||+|||+++...-.+=
T Consensus 11 ~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF-- 88 (394)
T COG2814 11 MWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF-- 88 (394)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH--
Confidence 33334455677778888888765433 34455 7777777777788888999999999999999999988664321
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHH-HHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAG-AVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg-~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~ 303 (598)
.++..+..+ .. + ++.+.+.=++.+ +...+..++...+. + +++++ +-.||-+.+-.--.+
T Consensus 89 --i~~n~l~al--Ap-----~--f~~Ll~aR~~~g~a~G~f~~i~~~~a~--~----lvpp~---~~~~Aiaiv~~G~tl 148 (394)
T COG2814 89 --IVSNLLSAL--AP-----S--FAVLLLARALAGLAHGVFWSIAAALAA--R----LVPPG---KRGRALALVFTGLTL 148 (394)
T ss_pred --HHHHHHHHH--hc-----c--HHHHHHHHHHHHHHHHHHHHHHHHHHH--H----HcCcc---chhhHHHHHHHHHHH
Confidence 112111111 11 1 122222212222 33455555554443 2 77764 788999999999999
Q ss_pred HHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhH
Q 007555 304 CEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (598)
Q Consensus 304 ~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (598)
+.++|.++|.++=+.+|............+.. .+ +....+ | +++.+++ .+ .+
T Consensus 149 A~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~---~~---~~~~~l--P-~~~~~~~-----------~~------~~-- 200 (394)
T COG2814 149 ATVLGVPLGTFLGQLFGWRATFLAIAVLALLA---LL---LLWKLL--P-PSEISGS-----------LP------GP-- 200 (394)
T ss_pred HHHHhccHHHHHHHHhhHHHHHHHHHHHHHHH---HH---HHHHhC--C-CccCCCC-----------CC------cc--
Confidence 99999999999999998765444433322221 11 222222 2 1111000 00 01
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007555 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (598)
Q Consensus 384 ~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~ 462 (598)
.++=++ .+|||.++..+..+.+.++---...+..-+|+.+ .|++++.++++.-..++++++|+++.+++.+| +..
T Consensus 201 --~~~~~~-~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~ 276 (394)
T COG2814 201 --LRTLLR-LLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR 276 (394)
T ss_pred --hhHHHH-HhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch
Confidence 112233 5678877776666666544211111233335554 79999999999999999999999999999999 777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhh-hhhhhhhhhccCCC---ccchhHHHHHHHH
Q 007555 463 KAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSY-DIVGAQILQTGIPS---SKANLIGTTEISV 538 (598)
Q Consensus 463 r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~f-dl~~~~l~Q~~VP~---~~rGRV~sv~~sl 538 (598)
+............ + ......+. ... ..+..+++ |.| +.+..+.+|...-+ +.++.+.|...+.
T Consensus 277 ~~l~~~~~l~a~~--~-l~l~~~~~----~~~-~~~~~~~~-----wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa 343 (394)
T COG2814 277 RALIAALLLLALA--L-LALTFTGA----SPA-LALALLFL-----WGFAFSPALQGLQTRLARLAPDAADLAGSLNVAA 343 (394)
T ss_pred hHHHHHHHHHHHH--H-HHHHHhcc----hHH-HHHHHHHH-----HHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHH
Confidence 7665443222111 1 11112121 111 12212221 222 44555666666655 8999999999988
Q ss_pred HHHHH-HHHHHhhhhccCcchhHHHHHHHHHHHHHH
Q 007555 539 ASLVE-SVMLGVAIIANDVSHFGFLATLSLLSVVGA 573 (598)
Q Consensus 539 ~~~~~-ll~~~~~i~~~~~~~f~~l~l~S~~~V~~a 573 (598)
.++.. ++..+.|.+.+. -......+.+...+..+
T Consensus 344 ~nlgia~GA~lGG~v~~~-~g~~~~~~~~a~l~~~a 378 (394)
T COG2814 344 FNLGIALGAALGGLVLDA-LGYAATGWVGAALLLLA 378 (394)
T ss_pred HHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHH
Confidence 88884 666666777666 33333333333333333
No 62
>PRK03699 putative transporter; Provisional
Probab=99.44 E-value=1.3e-09 Score=117.10 Aligned_cols=267 Identities=11% Similarity=0.001 Sum_probs=150.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 147 r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
+-+...+.+.++...-.......+|-+.. ..+ |...++.......+...+..++.|.+.||++|||+++.+.+...+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 85 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAE-YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILA 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 44555666666666655666666676554 456 9899999988889999999999999999999999988776543222
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~ 305 (598)
..+..+ . . + .+.+++..++.|.......+.....+. + ..+++ +..++++.......+..
T Consensus 86 ----~~l~~~--~-~----~--~~~~~~~~~l~G~~~g~~~~~~~~~i~-~----~~~~~---~r~~~~~~~~~~~~~g~ 144 (394)
T PRK03699 86 ----VAGLMF--S-H----S--LALFSIAMFVLGVVSGITMSIGTFLIT-H----VYEGK---QRGSRLLFTDSFFSMAG 144 (394)
T ss_pred ----HHHHHH--c-c----h--HHHHHHHHHHHHHhhHhhccchhHHhh-h----hcccc---hHHHHHHHHHHHHHHHH
Confidence 111111 1 1 1 133444444555554444333322221 2 33432 45566666666677778
Q ss_pred HhhHHHHHHHHh-hhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHH
Q 007555 306 IAGASLFGILLS-KYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (598)
Q Consensus 306 i~GP~lgGlL~s-~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (598)
.++|.+++.++. ..+......+..... +...+ +... ...|+++ ++++ + ++. +
T Consensus 145 ~~~~~~~~~l~~~~~gw~~~f~~~~~~~---~~~~~---~~~~-~~~p~~~---~~~~--------~-~~~----~---- 197 (394)
T PRK03699 145 MIFPIIAAYLLARSIEWYWVYACIGLVY---VAIFI---LTLF-SEFPALG---KHAP--------K-ADK----P---- 197 (394)
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHH---HHHHH---HHHh-cCCcccc---ccCc--------c-ccC----c----
Confidence 899999988875 345443222221111 11111 1111 1112111 0000 0 000 0
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 007555 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (598)
Q Consensus 385 ~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r 463 (598)
+.+.. + +|.++.......++......+...++.|+.+ .|+++.+.|.+.+...+++++|.++.+++.+|++..+
T Consensus 198 ~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 272 (394)
T PRK03699 198 VAKEK----W-GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR 272 (394)
T ss_pred ccccc----C-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh
Confidence 00111 1 2222222222222222112344567778864 6999999999999999999999999999999999876
Q ss_pred HHHH
Q 007555 464 AGAA 467 (598)
Q Consensus 464 ~g~~ 467 (598)
....
T Consensus 273 ~l~~ 276 (394)
T PRK03699 273 ILTV 276 (394)
T ss_pred HHHH
Confidence 6543
No 63
>PRK09848 glucuronide transporter; Provisional
Probab=99.43 E-value=1.6e-09 Score=118.55 Aligned_cols=342 Identities=11% Similarity=-0.002 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccC----CchH-HHHHHHHHHHHHHH
Q 007555 154 ACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS----PRIP-AYICLNTVQAAAQL 227 (598)
Q Consensus 154 ~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~----~Rr~-vmi~~d~~q~~~v~ 227 (598)
.|++...++..+...=++.|..+..+ |+..+|+......+-..+..|+.|.++||. +||| .+..+-+.- .
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~----~ 90 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPL----M 90 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHH----H
Confidence 67777777776655445668888888 999999999999999999999999999996 4444 444443221 1
Q ss_pred HHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHH-----HH
Q 007555 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI-----DL 302 (598)
Q Consensus 228 ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~i-----d~ 302 (598)
+.+.+ .+....+. .........++...+.++...++++.+... .+.+..+ +++..+.++..+.. ..
T Consensus 91 ~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~al-----~~~~~~~--~~~r~~~~~~r~~~~~~~~~~ 161 (448)
T PRK09848 91 IFSVL-VFWVPTDW-SHSSKVVYAYLTYMGLGLCYSLVNIPYGSL-----ATAMTQQ--PQSRARLGAARGIAASLTFVC 161 (448)
T ss_pred HHHHH-HHhCcCCC-CcchHHHHHHHHHHHHHHHHHHhcccHhhh-----hhhhcCC--HHHHHHHHHHHHHHHHHHHHH
Confidence 11111 22111010 011111112333344555556666555432 2224443 23555666554422 22
Q ss_pred HHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhh
Q 007555 303 LCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVG 382 (598)
Q Consensus 303 ~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (598)
++..++|.+++..-+... ...........+..++.. +...+. .++ +.+++ . + ..
T Consensus 162 ~~~~~~p~i~~~~g~~~~-~~~~~~~~~~~v~~~~~~----~~~~~~-~~e--~~~~~---------~---~----~~-- 215 (448)
T PRK09848 162 LAFLIGPSIKNSSPEEMV-SVYHFWTIVLAIAGMVLY----FICFKS-TRE--NVVRI---------V---A----QP-- 215 (448)
T ss_pred HHHHHHHHHHHhCCCchh-hhHHHHHHHHHHHHHHHH----HHHHcC-cEe--ccCCC---------c---c----CC--
Confidence 345566666653210000 001011111111111111 111110 111 00000 0 0 01
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007555 383 IEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 461 (598)
Q Consensus 383 ~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~ 461 (598)
.+++.++.++++|.++.......+++.....+....+.|+.+ .|.++..-++....+.++.++++.+.+++.+|+|.
T Consensus 216 --~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~ 293 (448)
T PRK09848 216 --SLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGK 293 (448)
T ss_pred --CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 245567778899988775554444433222333334445543 67666544454555567788899999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCc-------cchhHHHH
Q 007555 462 LKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS-------KANLIGTT 534 (598)
Q Consensus 462 ~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~-------~rGRV~sv 534 (598)
.+...++.... ..+......... ...+.+...+++..+|.........++..+.+|++ +.|..+|+
T Consensus 294 ~~~~~~g~~~~----~i~~~~~~~~~~---~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~ 366 (448)
T PRK09848 294 KNTFLIGALLG----TCGYLLFFWVSV---WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSL 366 (448)
T ss_pred HHHHHHHHHHH----HHHHHHHHHcCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHH
Confidence 77766554321 111111111110 11112222233445566667777788888888765 45999988
Q ss_pred HHHHHHHHH
Q 007555 535 EISVASLVE 543 (598)
Q Consensus 535 ~~sl~~~~~ 543 (598)
.+..+.+..
T Consensus 367 ~~~~~klg~ 375 (448)
T PRK09848 367 FSFTRKCGQ 375 (448)
T ss_pred HHHHHHHHH
Confidence 888777664
No 64
>PRK10133 L-fucose transporter; Provisional
Probab=99.43 E-value=2.3e-09 Score=117.74 Aligned_cols=354 Identities=10% Similarity=-0.007 Sum_probs=194.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHH
Q 007555 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (598)
Q Consensus 149 f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ 227 (598)
|..+..--++-.+.+.+...-+|.+ .+..+ |....++......+...+.+++.|.++||++|||++..+-++-.+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~-- 104 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALG-- 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH--
Confidence 5666666667677777788888887 45556 9999999999999999999999999999999999998776543222
Q ss_pred HHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHh
Q 007555 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (598)
Q Consensus 228 ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~ 307 (598)
+.+.... ... .+ .+.+++..++.|+......++.+..+ +| +.+++ +-.+..+..+....+..++
T Consensus 105 --~~l~~~~-~~a---~~--~~~ll~~r~l~G~g~g~~~~~~~~~v-~~----~~~~~---~~~~~~s~~~~~~~~G~~~ 168 (438)
T PRK10133 105 --AALFWPA-AEI---MN--YTLFLVGLFIIAAGLGCLETAANPFV-TV----LGPES---SGHFRLNLAQTFNSFGAII 168 (438)
T ss_pred --HHHHHHH-Hhc---CC--HHHHHHHHHHHHHHHHHHHhhHHHHH-HH----hCChh---hHHHHHHHHHHHHHHHHHH
Confidence 1111111 111 11 23455555666666666666554433 23 32221 2223467788888889999
Q ss_pred hHHHHHHHHhhh-c-----------------hhHHH------HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc
Q 007555 308 GASLFGILLSKY-E-----------------PVTCL------KFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSC 363 (598)
Q Consensus 308 GP~lgGlL~s~~-~-----------------~~~~l------~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~ 363 (598)
||.+++.+.... + ..... .+.........+..+ +...+. |+ . +++++
T Consensus 169 g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~---~~~~~~--p~--~-~~~~~- 239 (438)
T PRK10133 169 AVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALL---IMLTKF--PA--L-QSDNH- 239 (438)
T ss_pred HHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcC--CC--C-Ccccc-
Confidence 999988765211 1 00000 000000011111000 111111 11 1 10000
Q ss_pred cCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH--hcCCChhHHHHHHHHH
Q 007555 364 CRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT--QRGLNPSIIGGFSGLC 441 (598)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~--~lg~s~~~iG~~~g~g 441 (598)
. ++. .. +..+.++.++++|.++..+....++...........+.|+. ..|+++...|......
T Consensus 240 ------~--~~~---~~----~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~ 304 (438)
T PRK10133 240 ------S--DAK---QG----SFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGT 304 (438)
T ss_pred ------c--ccc---cc----chhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHH
Confidence 0 000 01 12233455778887765444333333221122234455653 3699999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhc
Q 007555 442 ASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQT 521 (598)
Q Consensus 442 avgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~ 521 (598)
.+++++|.+..+++.+|+|..+...++...... .+.+..+..+ ....+ ++.+..+|....--...+.-++
T Consensus 305 ~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~--~~~~~~~~~~----~~~~~----~~~l~glg~~~i~P~~~s~a~~ 374 (438)
T PRK10133 305 MVCFFIGRFTGTWLISRFAPHKVLAAYALIAMA--LCLISAFAGG----HVGLI----ALTLCSAFMSIQYPTIFSLGIK 374 (438)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH--HHHHHHHcCC----hHHHH----HHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999987776554332211 1111111111 11111 1112223333334455566667
Q ss_pred cCCCccchhHHHHHHHHHHHHHHHHHHhhhhccCc
Q 007555 522 GIPSSKANLIGTTEISVASLVESVMLGVAIIANDV 556 (598)
Q Consensus 522 ~VP~~~rGRV~sv~~sl~~~~~ll~~~~~i~~~~~ 556 (598)
..|++ .|...++..+-..+.-+++.++|.+.+..
T Consensus 375 ~~~~~-~~~as~l~~~~~~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 375 NLGQD-TKYGSSFIVMTIIGGGIVTPVMGFVSDAA 408 (438)
T ss_pred ccchh-hccchhHHhHHhccchHHHHHHHHHHHhc
Confidence 66664 66677666532222345667777666554
No 65
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.39 E-value=4.1e-09 Score=113.32 Aligned_cols=356 Identities=10% Similarity=-0.044 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007555 159 GNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHT 238 (598)
Q Consensus 159 S~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~ 238 (598)
++-+=-.+...+|.+..+..-|..+.+....+..+.+.+..++.|.+.||++||++++.+-.. .+. ..+... .
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~-----~~~-~~~~~~-~ 75 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLAT-----FAA-AAGRLL-D 75 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHH-----HHH-HHHHHH-H
Confidence 444455667777777766544889999998888999999999999999999999877644221 111 111111 1
Q ss_pred hccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhh
Q 007555 239 VIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK 318 (598)
Q Consensus 239 ~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~ 318 (598)
. .+ .+.+++.-++.|..+...-++... + .+|.| + ++..++++..+....+..++||.+++.+...
T Consensus 76 ~----~~--~~~l~~~R~l~G~g~~~~~~~~~~-~-~~~~~----~---~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~ 140 (368)
T TIGR00903 76 P----FN--YEWLLACQLLAALGQPFLLNAFAP-A-ASQIR----E---ERRDLVISLLSFAMYLGIIFALAAGLKIYTA 140 (368)
T ss_pred h----cc--HHHHHHHHHHHHhHhHHHHHHHHH-H-HHHcC----H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0 01 223344444445444433222322 2 34543 2 3788999999999999999999999999887
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCc
Q 007555 319 YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV 398 (598)
Q Consensus 319 ~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pv 398 (598)
.|......+... ..++... +....+ |+. ++..+ +.. +. ++..+.++.+++||.
T Consensus 141 ~gWr~~f~~~~~---l~~~~~~---~~~~~l--p~~--p~~~~------------~~~---~~--~~~~~~~~~ll~~~~ 193 (368)
T TIGR00903 141 GGLQLLIIPIAA---VAAAGII---LVLAAL--PAL--PFQAA------------EGF---GF--KDAVKEFGALAGRKD 193 (368)
T ss_pred cchHHHHHHHHH---HHHHHHH---HHHHHc--CCC--CCCCC------------CCc---ch--HHHHHHHHHHHcChh
Confidence 775543332111 1111111 111122 211 11000 000 00 112235677888887
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 007555 399 LPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAAT-FLSAYLVRRLGILKAGAAGLIFQASLLA 477 (598)
Q Consensus 399 ll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGt-l~~~~l~rrlg~~r~g~~~l~~q~~~L~ 477 (598)
+..........+.....+..-++.|+++.|++.. .|.......++|.+|. ++..++.|| +..+....... .+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g~~~~~d~~~r~-~~r~~~~~~~~---~~~a 268 (368)
T TIGR00903 194 LWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIGVAVIPDRVARA-GLRSIYIRAAA---LLIA 268 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHHHHHhhHHhhhh-hhHHHHHHHHH---HHHH
Confidence 7654333222222212344557778877788764 5555555555555444 223333222 22121111000 0001
Q ss_pred HHHHH-HhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccC
Q 007555 478 MAVAV-YWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAND 555 (598)
Q Consensus 478 ~~v~~-~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~ 555 (598)
.+... ....+. ...+ . .+.+..++....-....++.+|..|++.||+..|+.+++.+..- ..+.+.+.+..
T Consensus 269 ~~~~~~~~~~~~---~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~- 341 (368)
T TIGR00903 269 AFFLALAFELNR---LALF-A--FIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS- 341 (368)
T ss_pred HHHHHHHHcccc---HHHH-H--HHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-
Confidence 11111 111111 1111 1 11112122111112355789999999999999999999998885 55555554442
Q ss_pred cchhHHHHHHHHHHHHHHHHH
Q 007555 556 VSHFGFLATLSLLSVVGAAWM 576 (598)
Q Consensus 556 ~~~f~~l~l~S~~~V~~a~~l 576 (598)
+..+...+.....+..++..
T Consensus 342 -~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 342 -SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred -CHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444443
No 66
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.38 E-value=3.2e-09 Score=117.90 Aligned_cols=161 Identities=10% Similarity=-0.081 Sum_probs=112.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cC-ChhHHHHHHHHHHHHHHHcccccceeecc-CCchHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALL--HP-SLLPVAVMGFFSKLILIVGGPLVGKLMDH-SPRIPAYICLNT 220 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~l--t~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR-~~Rr~vmi~~d~ 220 (598)
||+.++.++..++...++-....--+|+|+... .+ |....+.......+...+..+++|.++|| ++|||++..+-+
T Consensus 8 ~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~ 87 (475)
T TIGR00924 8 HPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGI 87 (475)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHH
Confidence 678899999999999999988888899999876 67 88899999888888999999999999999 899999887765
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHH
Q 007555 221 VQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI 300 (598)
Q Consensus 221 ~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~i 300 (598)
+..+. .. ... ..+ + .+.+++..++.+....++.+.....+ .||. +++++.+..++.+.....
T Consensus 88 ~~~~g----~~--~~~--~~~---~--~~~~~~~~~l~g~g~g~~~~~~~~~~-a~~~----~~~~~~~r~~~~~~~~~~ 149 (475)
T TIGR00924 88 VLMLG----HF--MLA--MSI---Y--PDLIFYGLGTIAVGSGLFKANPSSMV-GKLY----ERGDMPRRDGGFTLFYMS 149 (475)
T ss_pred HHHHH----HH--HHH--hcc---c--HhHHHHHHHHHHhccccccCCHHHHH-HHhc----CCCCcccccceehhHHHH
Confidence 43221 11 111 110 1 12333444445555544444433322 3433 222112455677888888
Q ss_pred HHHHHHhhHHHHHHHHhhhchhH
Q 007555 301 DLLCEIAGASLFGILLSKYEPVT 323 (598)
Q Consensus 301 d~~~~i~GP~lgGlL~s~~~~~~ 323 (598)
..++.++||.++|.+....|...
T Consensus 150 ~niG~~ig~~l~g~l~~~~g~~~ 172 (475)
T TIGR00924 150 INIGSFISPLLAGVIAENYGYHV 172 (475)
T ss_pred HHHHHHHHHHHHHHHHHhcChHH
Confidence 89999999999999988767543
No 67
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.38 E-value=8e-10 Score=121.33 Aligned_cols=252 Identities=11% Similarity=-0.064 Sum_probs=140.3
Q ss_pred cC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHH
Q 007555 178 HP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLV 256 (598)
Q Consensus 178 t~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~ 256 (598)
.+ |....|+...+..+.+++.++++|.++||++||+++..+.++..+. ..+..+.... . .+.+++.-+
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~----~~~~~~~~~~-----~--~~~l~~~r~ 139 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVI----SIVIPWAAGG-----G--IALVVFCRV 139 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHH----HHHHHHHHHc-----C--chHHHHHHH
Confidence 35 7888898888899999999999999999999999988776542222 1111111111 1 123444455
Q ss_pred HHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhh-chhHHHHHHHHHHHHH
Q 007555 257 LAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY-EPVTCLKFAAGLIMWS 335 (598)
Q Consensus 257 llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~-~~~~~l~~~~~~~~~S 335 (598)
+.|..+....++.... ++...++ ++..++++.......++.++||.++|.+.... +......+.... .
T Consensus 140 ~~G~~~~~~~~~~~~~-----~~~~~~~---~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~---~ 208 (465)
T TIGR00894 140 IQGLAQGSVSPATHKI-----IVKWAPP---KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIV---G 208 (465)
T ss_pred HHHHhcccchhhHHHH-----HHhcCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHH---H
Confidence 5666666555544332 2223443 37889999999999999999999999998763 644322222111 1
Q ss_pred HHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhh
Q 007555 336 LPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLT 415 (598)
Q Consensus 336 ~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~ 415 (598)
++..+ ..+... .+.++..+..+++.++..++..++.+. ..+ -+..|+..+++|.+.........++.....
T Consensus 209 ~~~~~-~~~~~~---~~~p~~~~~~~~~~~~~i~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (465)
T TIGR00894 209 CAWSL-LWFVFP---ADDPSIHPCISKFEKKYINSSLQGQKG-STR----QSLPIKAIPKSLPVWAIWFAIFGHFWLYTI 279 (465)
T ss_pred HHHHH-HHHHHh---cCCcccCCCCCHHHHHHHHhhcccccC-CCC----CCCCHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 11111 001111 111110000000000000000000000 000 011356677777665433332222222123
Q ss_pred hhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007555 416 PGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (598)
Q Consensus 416 f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg 460 (598)
+...++.|+.+ .|++..+.|+..+...++++++.++.+++.+|++
T Consensus 280 ~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~ 325 (465)
T TIGR00894 280 LPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLK 325 (465)
T ss_pred HHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677764 7999999999999989999999999888887764
No 68
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.38 E-value=5.2e-09 Score=116.42 Aligned_cols=196 Identities=13% Similarity=0.092 Sum_probs=124.2
Q ss_pred hhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007555 379 VDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVR 457 (598)
Q Consensus 379 ~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~r 457 (598)
....++++++-+|...|+|.+..-++.-++|.-.+.....+...|.+ +.|++..++..+.-+..+.+++|+++++++.|
T Consensus 263 ~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~ 342 (477)
T PF11700_consen 263 LRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQD 342 (477)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567888888888888886554222223333222334456666887 58999999999999999999999999999999
Q ss_pred hhhhh--HHHHHHHHHHHHHHHHHHHHHhhcc--cccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHH
Q 007555 458 RLGIL--KAGAAGLIFQASLLAMAVAVYWSGS--LSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGT 533 (598)
Q Consensus 458 rlg~~--r~g~~~l~~q~~~L~~~v~~~~~g~--~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~s 533 (598)
|+|.. ++....+.....+...+...++... ..+.+.++++. .+.. +..-...-...++.-+.+|+++.|..+|
T Consensus 343 r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a-~~~G--~~~G~~qs~sRs~~~~LiP~g~e~efFg 419 (477)
T PF11700_consen 343 RFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLA-VLIG--LFMGGIQSASRSLFSRLIPPGREAEFFG 419 (477)
T ss_pred HhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHH-HHHH--HHhhhHHHHHHHHHHHhCCCchhhHHHH
Confidence 99987 6655544332121112211111111 11122233222 1221 2222456778899999999999999999
Q ss_pred HHHHHHHHHH-HHHHHhhhhccCcchhHHHHHHHHHHHHHHHHHH
Q 007555 534 TEISVASLVE-SVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMF 577 (598)
Q Consensus 534 v~~sl~~~~~-ll~~~~~i~~~~~~~f~~l~l~S~~~V~~a~~l~ 577 (598)
.......... +++++.|++........+-.+.-....+.+..++
T Consensus 420 ly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll 464 (477)
T PF11700_consen 420 LYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL 464 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 9999999886 5666678887777655454443333444433333
No 69
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.38 E-value=8.6e-10 Score=116.41 Aligned_cols=326 Identities=14% Similarity=0.037 Sum_probs=172.6
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccch
Q 007555 168 FAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSML 247 (598)
Q Consensus 168 fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l 247 (598)
..+|.+..+..-|...++.......+...+.+++.|.+.||++|||++..+.+...+. .+.. ... +
T Consensus 21 ~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~------~~~~--~~~----~-- 86 (355)
T TIGR00896 21 PLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAG------ILIR--SAP----G-- 86 (355)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHH------HHHH--Hhc----c--
Confidence 3455555444338999999999999999999999999999999999988766432211 1111 111 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchhHHHHH
Q 007555 248 LHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKF 327 (598)
Q Consensus 248 ~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~~~l~~ 327 (598)
.+.+++..++.|.......++....+ .|| .+ ++..++++..+....++..+||.+++.+....+...-..+
T Consensus 87 ~~~l~~~~~~~g~g~~~~~~~~~~~~-~~~----~~----~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f 157 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIINVLLPSLI-KRD----FP----QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQAL 157 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHH-HHh----Cc----chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 12333333334443333332222222 232 22 2567899999988888899999999988765432111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHHHHHHHH
Q 007555 328 AAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVL 407 (598)
Q Consensus 328 ~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~l 407 (598)
.... +..+. .. . ..+ ++.++ +++++ . +.. +.+++..+++|.+........
T Consensus 158 ~~~~-~~~~~-~~---~--~~~--~~~~~-~~~~~-------~--~~~-----------~~~~~~~~~~~~~~~~~~~~~ 207 (355)
T TIGR00896 158 AWWA-LPALL-AL---L--AWI--PQVRR-RVAAN-------Q--TTT-----------RLTPVRIWRSPLAWQVTVFFG 207 (355)
T ss_pred HHHH-HHHHH-HH---H--HHh--hhhcc-ccCCC-------C--CCC-----------CCCCchhhcCHhHHHHHHHHH
Confidence 1000 01111 11 0 111 11111 11000 0 000 011233456665544332222
Q ss_pred HHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHH-HHhh
Q 007555 408 LCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK-AGAAGLIFQASLLAMAVA-VYWS 485 (598)
Q Consensus 408 L~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r-~g~~~l~~q~~~L~~~v~-~~~~ 485 (598)
+.......+...++.|+++.|+++...|.+.+...+++++|.+..+++.+|++..| ....+.... .++.. ..+.
T Consensus 208 ~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~----~~~~~~~~~~ 283 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQ----LVGLCGLLFA 283 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH----HHHHHHHHHh
Confidence 22111123344566787778999999999999999999999999999999995433 333222211 11111 1111
Q ss_pred cccccchhHHHHHHHHHHHhhhhhhhhhhhhh-hhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccCcc
Q 007555 486 GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQ-ILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIANDVS 557 (598)
Q Consensus 486 g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~-l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~~~ 557 (598)
.. .....+.. +..+|.........+ +.|+..+++++|++++..+++.++.. +.+.+.|.+.+...
T Consensus 284 ~~--~~~~~~~~-----l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 284 PM--HGLWAWAL-----VLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred hh--hHHHHHHH-----HHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 01111111 122232222222333 34555667888999999887776653 45566666654433
No 70
>PRK15075 citrate-proton symporter; Provisional
Probab=99.37 E-value=5.1e-09 Score=114.30 Aligned_cols=358 Identities=10% Similarity=-0.025 Sum_probs=177.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHH-H----HHH-HHHHHHHHcccccceeeccCCchHHHHHHHHH
Q 007555 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVA-V----MGF-FSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (598)
Q Consensus 148 ~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~a-v----~~~-~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~ 221 (598)
....++.+.++..+.-....++.|.+..+...+....+ + ..+ ...+...+.+++.|.++||++|||+++.+-++
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 35667788888888888888888877776654443322 1 111 11222234578889999999999998876553
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccchHH-----HHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHH
Q 007555 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLH-----PWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAV 296 (598)
Q Consensus 222 q~~~v~ls~~~l~~~~~~~~~~~~~l~~-----~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~ 296 (598)
-.+. ..+..+ .. + ..... .+++.-++.|.......+... ..-.|| .+++ +..++++.
T Consensus 96 ~~~~----~~l~~~--~~---~-~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~-~~~~e~----~p~~---~rg~~~~~ 157 (434)
T PRK15075 96 MASG----TLLIAF--VP---G-YATIGLAAPLLVLLGRLLQGFSAGVELGGVS-VYLAEI----ATPG---RKGFYTSW 157 (434)
T ss_pred HHHH----HHHHHh--CC---c-HHHHHHHHHHHHHHHHHHhhccccccHHHHH-HHHHhh----CCcc---cchHHHHH
Confidence 2221 111111 11 0 00000 112222233333222222221 222343 3432 67889999
Q ss_pred HHHHHHHHHHhhHHHHHHHHhh--------hchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCC
Q 007555 297 LNRIDLLCEIAGASLFGILLSK--------YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSN 368 (598)
Q Consensus 297 l~~id~~~~i~GP~lgGlL~s~--------~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~ 368 (598)
.....+.+..+||.+++.+... .|....+.+. +...+.. +. .+...|+ .++..+.
T Consensus 158 ~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~----~~~~~~~----~~-~~~~~~e---~~~~~~~----- 220 (434)
T PRK15075 158 QSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIG----CLIVPFI----FL-IRRSLEE---TEEFLAR----- 220 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHH----HHHHHHH----HH-HHHhcCC---CHHHHHh-----
Confidence 9988889999999999987543 3322222211 1111101 11 1111111 0000000
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHH
Q 007555 369 EGPVPDADNIVDVGIEAIKLGWKEYMQQPV-LPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGV 446 (598)
Q Consensus 369 ~~~~~~~~~~~~~~~~~i~eG~~~~~~~pv-ll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGL 446 (598)
..+++ .++.+++ ..+++. +...+.................+.|+++ .|+++.+.++.....+++++
T Consensus 221 -~~~~~----~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~ 288 (434)
T PRK15075 221 -KHRPS----MREIFRS-------LAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNF 288 (434)
T ss_pred -hhccc----cccHHHH-------HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 00000 1112222 222221 1111111111111101223346667775 79999988888888899999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCc
Q 007555 447 AATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS 526 (598)
Q Consensus 447 lGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~ 526 (598)
+|+.+.+++.+|+|..+...++......+ ............ ........ ..+..++...++.....+.+|..|++
T Consensus 289 ~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~g~~~~~~~~~~~e~~p~~ 363 (434)
T PRK15075 289 IWLPIGGALSDRIGRRPVLIAFTVLAILT-AYPALSWLVAAP--SFARMLAV--ELWLSFLYGSYNGAMVVALTEVMPAE 363 (434)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHH-HHHHHHHHHcCC--chHHHHHH--HHHHHHHHHHHHhhHHHHHHHHCCCC
Confidence 99999999999999776554432221111 000001111111 11111110 01111122234444557789999999
Q ss_pred cchhHHHHHHHHHHHH--HHHHHHhhhhccCcc
Q 007555 527 KANLIGTTEISVASLV--ESVMLGVAIIANDVS 557 (598)
Q Consensus 527 ~rGRV~sv~~sl~~~~--~ll~~~~~i~~~~~~ 557 (598)
+||+.+++..++.... ...+++.+.+.+...
T Consensus 364 ~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 364 VRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred ccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 9999999876655532 245566666555433
No 71
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.36 E-value=1.2e-08 Score=118.82 Aligned_cols=153 Identities=16% Similarity=0.070 Sum_probs=93.5
Q ss_pred chhHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHH
Q 007555 147 EGLYALYACCLAGNLVEQL----WNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (598)
Q Consensus 147 r~f~~L~~gq~lS~~G~~i----~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q 222 (598)
+..+.++..-.+..+.+.+ ..+.+|.+.....-|....+.+..+..+..++.+++.|.++||++||++++.+-++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4455566666666666655 444555444333338888899988889999999999999999999999988765432
Q ss_pred HHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHH
Q 007555 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (598)
Q Consensus 223 ~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~ 302 (598)
.+. ..+..+ .. + .+.+++.-++.|.......+.... +-.+ +.++ +...++.+.++....
T Consensus 243 ~i~----~ll~af--a~-----s--~~~llv~R~l~G~g~g~~~p~~~~-~isE----~~p~---~~Rg~~~g~~~~~~~ 301 (742)
T TIGR01299 243 GFF----AFFSSF--VQ-----G--YGFFLFCRLLSGFGIGGAIPIVFS-YFAE----FLAQ---EKRGEHLSWLCMFWM 301 (742)
T ss_pred HHH----HHHHHH--Hh-----h--HHHHHHHHHHHHHHHHHHHHHHHH-HHHH----HCCH---HHHHHHHHHHHHHHH
Confidence 221 111111 11 1 123344434444333322222222 2223 3343 266788888888888
Q ss_pred HHHHhhHHHHHHHHhhhc
Q 007555 303 LCEIAGASLFGILLSKYE 320 (598)
Q Consensus 303 ~~~i~GP~lgGlL~s~~~ 320 (598)
+..+++|.+++.+...+|
T Consensus 302 iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 302 IGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 889999998888775443
No 72
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.36 E-value=8.6e-09 Score=114.32 Aligned_cols=290 Identities=12% Similarity=-0.030 Sum_probs=144.9
Q ss_pred cCCCCChhhhhhhccCCCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccc
Q 007555 127 TIPVLSEEEQNALAATPAHP---EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLV 202 (598)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~r~---r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~a 202 (598)
++|+..++.+++.+.-+.++ +.+...|..-++..++...+....|.+ ....+ |....+.......+..++..++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~ 91 (476)
T PLN00028 13 ALPVDSEHKATEFRLFSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAM 91 (476)
T ss_pred CCCcCcccccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56665555555554433333 334445555555555554444444444 44455 88888888777778888888999
Q ss_pred ceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeec
Q 007555 203 GKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLA 282 (598)
Q Consensus 203 GvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv 282 (598)
|.+.||++||+++..+-++-.+. .+...... + .+.+++.-++.|.....+.+.. . .-.+|.
T Consensus 92 G~l~dr~G~r~~~~~~~~~~~~~------~~~~~~~~-----s--~~~l~~~r~l~G~~~~~~~~~~-~-~i~~~~---- 152 (476)
T PLN00028 92 GPVCDLYGPRYGSAFLLMLTAPA------VFCMSLVS-----S--ATGFIAVRFFIGFSLATFVSCQ-Y-WMSTMF---- 152 (476)
T ss_pred HHHHHHhCChHHHHHHHHHHHHH------HHHHHHhc-----C--HHHHHHHHHHHHHHHHhhHHHH-H-HHHHhc----
Confidence 99999999999887654332111 11111111 1 1233333344444333222211 1 112433
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhh---------hchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 007555 283 GINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK---------YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGV 353 (598)
Q Consensus 283 ~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~---------~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~ 353 (598)
++ ++..++++.......+...+||.+.+.+... .|....+.+... ..++..+ ....+.++.
T Consensus 153 ~~---~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~---l~l~~~l----~~~~~~~~~ 222 (476)
T PLN00028 153 NG---KIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGL---LHIIMGI----LVLTLGQDL 222 (476)
T ss_pred Ch---hheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHH---HHHHHHH----HHHHHcCcC
Confidence 32 2566788887766666666666666554332 122221221111 1111111 111111111
Q ss_pred cccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHHH-HHHHHHHHHhhhhhhHHHHHHHHh-cCCCh
Q 007555 354 LDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPAS-LAYVLLCLNVVLTPGSLMTAFLTQ-RGLNP 431 (598)
Q Consensus 354 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~~-l~~~lL~~~vll~f~~l~~~yl~~-lg~s~ 431 (598)
++. + .++..+ +...+ .... .+-++..++++.+... +.+...+... ..+...++.|+.+ .|+++
T Consensus 223 p~~-~-~~~~~~----~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~l~~~~g~s~ 287 (476)
T PLN00028 223 PDG-N-YRELKK----SGTMP----KDSF----SKVLRYGVTNYRTWILALTYGYSFGVE-LTMDNIIAEYFYDRFGLSL 287 (476)
T ss_pred CCC-c-hhhHHh----cCccc----cccH----HHHHHHHHcCchhHHHHHHHHHHHHHH-HHHHhHHHHHHHHhcCCCH
Confidence 110 0 000000 00000 0111 1234444556554322 2222122111 1233456667764 69999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007555 432 SIIGGFSGLCASMGVAATFLSAYLVRRLGI 461 (598)
Q Consensus 432 ~~iG~~~g~gavgGLlGtl~~~~l~rrlg~ 461 (598)
...|.+.+..++++++|.++.+++..|++.
T Consensus 288 ~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~ 317 (476)
T PLN00028 288 ETAGAIAASFGLMNLFARPAGGYLSDVAAR 317 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 999999999999999999999988888764
No 73
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.35 E-value=5.4e-09 Score=113.61 Aligned_cols=373 Identities=13% Similarity=0.057 Sum_probs=197.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 146 ~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
.+-+..++.+.++..+......++.| .+.+..+ |....++...+..+...+.+++.|.+.||++||+++..+-++-.+
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 34466677888888888888888888 4555556 999999999999999999999999999999999998776543222
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
. .. ...... + .+.+++.-++.|..+..+.++....+ .+|.| + ++..++++..+....++
T Consensus 86 ~----~~--~~~~~~-----~--~~~l~~~r~l~G~~~~~~~~~~~~~~-~~~~~----~---~~rg~~~~~~~~~~~~g 144 (412)
T TIGR02332 86 A----ST--ATMFAT-----G--PESLYLLRILVGIAEAGFLPGILLYL-TFWFP----A---YFRARANALFMIAMPVT 144 (412)
T ss_pred H----HH--HHHHhc-----C--HHHHHHHHHHHHHHHhhHHHHHHHHH-HHHcC----H---HHHHHHHHHHHHHHHHH
Confidence 1 11 111111 1 13344444555665555555443322 34433 2 36788999999988999
Q ss_pred HHhhHHHHHHHHhh------hchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--cccccc-------CCCCC
Q 007555 305 EIAGASLFGILLSK------YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAK--CSQSCC-------RTSNE 369 (598)
Q Consensus 305 ~i~GP~lgGlL~s~------~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~--~~~~~~-------~~~~~ 369 (598)
.++||.++|.+... .|......+.... .++...+ .+. .+ ++.+++.+ ++++.. ++..+
T Consensus 145 ~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~---~l~~~~~-~~~--~~-~~~p~~~~~l~~~~~~~~~~~~~~~~~~ 217 (412)
T TIGR02332 145 MALGLILSGYILALDGLMALKGWQWLFLLEGFP---SVILGVM-TWF--WL-DDSPDKAKWLDEEDKKALKEMIDNDQLT 217 (412)
T ss_pred HHHHHHHHHHHHhCCCCCCccchhHHHHHHHHH---HHHHHHH-Hhh--cc-CCCcccCCCCCHHHHHHHHHHHHhcccc
Confidence 99999999988742 3433322222111 1111110 011 11 11111000 000000 00000
Q ss_pred CCCCCCccchhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhc--CCChhHHHHHHHHHHHHHHH
Q 007555 370 GPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQR--GLNPSIIGGFSGLCASMGVA 447 (598)
Q Consensus 370 ~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~l--g~s~~~iG~~~g~gavgGLl 447 (598)
.+.++.. ..+.. ...+.-|+-.++ |.+................+...++.|+.+. |+++...|.+.+...+++++
T Consensus 218 ~~~~~~~-~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~ 294 (412)
T TIGR02332 218 LEQPEGA-FAHAA-MPQRSMLREIFT-PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIF 294 (412)
T ss_pred ccccccc-ccccc-ccHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHH
Confidence 0000000 00000 000122333332 4332211111111111123344566677653 67888889999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCc
Q 007555 448 ATFLSAYLVRRLGILKAGAA-GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS 526 (598)
Q Consensus 448 Gtl~~~~l~rrlg~~r~g~~-~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~ 526 (598)
|.++.+++.+|++..+.... ....... ...+.. .... .....+. +.+..+|...--.......++..|++
T Consensus 295 g~l~~g~l~dr~~~r~~~~~~~~~~~~~--~~~~~~-~~~~----~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~ 365 (412)
T TIGR02332 295 GMIWWSRHSDRLKERKHHTALPYLFAAA--GWLLAS-ATDH----NLIQLLG--IIMASMGSFSAMAIFWTTPDQSISLQ 365 (412)
T ss_pred HHHHHHHHhcccCccHHHHHHHHHHHHH--HHHHHH-hcCC----HHHHHHH--HHHHHHHhhhhhhHHHhhcccccchH
Confidence 99999999999875443221 1111111 111111 1111 1111111 11111121111122334557788999
Q ss_pred cchhHHHHHHHHHHHHH-HHHHHhhhhccCcchh
Q 007555 527 KANLIGTTEISVASLVE-SVMLGVAIIANDVSHF 559 (598)
Q Consensus 527 ~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~~~~f 559 (598)
.||++.|+.++..++.. ..+.+.+.+.+....+
T Consensus 366 ~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~ 399 (412)
T TIGR02332 366 ARAIAIAVINATGNIGSALSPFLIGILKDATGSF 399 (412)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhcccccccCCCC
Confidence 99999999999988764 4556667766655433
No 74
>PRK09669 putative symporter YagG; Provisional
Probab=99.33 E-value=2.7e-08 Score=108.95 Aligned_cols=329 Identities=10% Similarity=0.051 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccC----Cc-hHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007555 167 NFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS----PR-IPAYICLNTVQAAAQLLSAAMIIHAHTVI 240 (598)
Q Consensus 167 ~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~----~R-r~vmi~~d~~q~~~v~ls~~~l~~~~~~~ 240 (598)
..-++.|..+..+ |+..+|+.-.+..+--.+..|+.|.++||. +| |+.|+..-+.. +++..+ .+. .+
T Consensus 29 ~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~----~i~~~l-~f~--~p 101 (444)
T PRK09669 29 MLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPF----GVVCLL-TFY--TP 101 (444)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHH----HHHHHH-HHh--CC
Confidence 3445666677788 999999999999999999999999999994 44 45565443321 122212 221 11
Q ss_pred cCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhc
Q 007555 241 PTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE 320 (598)
Q Consensus 241 ~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~ 320 (598)
..+........++..++.+......++.+.. +.+.+.++ +++.++.++.-.....+..++++.++..+...++
T Consensus 102 ~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~a-----l~~~~t~~--~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~ 174 (444)
T PRK09669 102 DFGATGKIIYACVTYILLSLVYTAINVPYCA-----MPGAITND--PRERHSLQSWRFALSFIGGLIVSVIALPLVDILG 174 (444)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhcchHHH-----hHHHhcCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1001111111222223444444455544432 23335543 3467788998888888888888887777766543
Q ss_pred h---hHHHHHHHHHH-HHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcC
Q 007555 321 P---VTCLKFAAGLI-MWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQ 396 (598)
Q Consensus 321 ~---~~~l~~~~~~~-~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~ 396 (598)
. ........... +...+..+ ...... ++ +.++++ + + . .+.++.++..+++
T Consensus 175 ~~~~~~g~~~~~~i~~ii~~v~~~---~~~~~~--~e--~~~~~~--------~---~----~----~~~~~~~~~~~~n 228 (444)
T PRK09669 175 KGDEQKGYFYAMMVMGLLGVVLFF---CCFFMT--KE--RYTPEV--------D---N----S----SSVWKDLKLLLGN 228 (444)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHH---HHhCCe--EE--ecCCCC--------c---C----C----CCHHHHHHHHhCC
Confidence 2 11111111111 11111111 111111 10 100000 0 0 0 1235667778899
Q ss_pred CchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 007555 397 PVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASL 475 (598)
Q Consensus 397 pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~ 475 (598)
|.++..+...+++........+....|.+. .+ ++...+.+...+.+.++++..+.+++.+|+|..+...++.....
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~-- 305 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFV-- 305 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH--
Confidence 988775554443322212223333334333 23 34455666777788889999999999999988776654432211
Q ss_pred HHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCC-------CccchhHHHHHHHHHHHHH
Q 007555 476 LAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIP-------SSKANLIGTTEISVASLVE 543 (598)
Q Consensus 476 L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP-------~~~rGRV~sv~~sl~~~~~ 543 (598)
+.+...+.... .. ...+....++..+|.........+++=+.+| ++.-|..+|.....+++..
T Consensus 306 -~~~~~~~~~~~--~~--~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~ 375 (444)
T PRK09669 306 -ILSALIFFIPP--SN--VWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGL 375 (444)
T ss_pred -HHHHHHHHhCc--ch--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHH
Confidence 11121222111 11 1111222233344444445555555544444 3345667777776666553
No 75
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.32 E-value=1.5e-08 Score=110.54 Aligned_cols=340 Identities=11% Similarity=0.011 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC---ChhH---HHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 152 LYACCLAGNLVEQLWNFAWPSAIALLHP---SLLP---VAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 152 L~~gq~lS~~G~~i~~fAlpL~v~~lt~---S~l~---~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
.+.+.++..+.-.++.++.|.+..+..+ +... .+..-....+-..+.+++.|.+.||++|||++..+.++-.+.
T Consensus 27 ~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 106 (432)
T PRK10406 27 ASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFG 106 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 3455777777777788888866665542 2322 222223344555688999999999999999998877643332
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~ 305 (598)
.. ...+...... ........+++.=++.|.......+.....+ .||.| ++ +..++.+..+.......
T Consensus 107 ~~----~~~~~~~~~~-~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i-~e~~p----~~---~rg~~~~~~~~~~~~G~ 173 (432)
T PRK10406 107 SL----VIACLPGYET-IGTWAPALLLLARLFQGLSVGGEYGTSATYM-SEVAV----EG---RKGFYASFQYVTLIGGQ 173 (432)
T ss_pred HH----HHhhcCCchh-HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHH-HHhCC----CC---cccHHHHHHHHHHHHHH
Confidence 11 1111100000 0000001122222344443332233222222 34433 22 33456666555555555
Q ss_pred HhhHHHHHHHHh--------hhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCcc
Q 007555 306 IAGASLFGILLS--------KYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADN 377 (598)
Q Consensus 306 i~GP~lgGlL~s--------~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 377 (598)
++++.+++.+.. ..|....+.+... ..++ . +.+.+ ..|+. ++.++ + . .
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~---~~ll----~-~~~~~-~~~e~---~~~~~-------~---~-~- 229 (432)
T PRK10406 174 LLALLVVVVLQQTLEDAELREWGWRIPFALGAV---LAVV----A-LWLRR-QLDET---SQQET-------R---A-L- 229 (432)
T ss_pred HHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH---HHHH----H-HHHHh-cCCCC---chHHH-------h---h-h-
Confidence 666655544432 2333322222111 1111 1 11221 11211 00000 0 0 0
Q ss_pred chhhhHHHHHHHHHHHhcCCchHHH-HHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 007555 378 IVDVGIEAIKLGWKEYMQQPVLPAS-LAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYL 455 (598)
Q Consensus 378 ~~~~~~~~i~eG~~~~~~~pvll~~-l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l 455 (598)
+ + +..++.++++|..... +............+...++.|+.+ .|++..+.+...+...+++.++..+.+++
T Consensus 230 --~----~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l 302 (432)
T PRK10406 230 --K----E-AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGAL 302 (432)
T ss_pred --c----c-cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 1123334455533322 111111111111233456667764 79999899998888888888888888999
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHH-hhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHH
Q 007555 456 VRRLGILKAGAAGLIFQASLLAMAVAVY-WSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTT 534 (598)
Q Consensus 456 ~rrlg~~r~g~~~l~~q~~~L~~~v~~~-~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv 534 (598)
.+|++..+...+.... +.......+ ...... .....+.+..+.....+ .+......+.+|..|++.||+..|+
T Consensus 303 ~Dr~grr~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~e~fp~~~r~t~~g~ 376 (432)
T PRK10406 303 SDKIGRRTSMLCFGSL---AALFTVPILSALQNVS-SPYAAFGLVMCALLIVS--FYTSISGILKAEMFPAQVRALGVGL 376 (432)
T ss_pred HHHcCchHHHHHHHHH---HHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCCCccchhhhH
Confidence 9999876654432211 111111111 111110 11111111111111111 1223455778999999999999999
Q ss_pred HHHHHHH
Q 007555 535 EISVASL 541 (598)
Q Consensus 535 ~~sl~~~ 541 (598)
.+.+.+.
T Consensus 377 ~~~~g~~ 383 (432)
T PRK10406 377 SYAVANA 383 (432)
T ss_pred HHHHHHH
Confidence 9988665
No 76
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.28 E-value=1.8e-09 Score=119.65 Aligned_cols=353 Identities=12% Similarity=0.028 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCC-----chHHHHHHHHHHHHHHHHH
Q 007555 156 CLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSP-----RIPAYICLNTVQAAAQLLS 229 (598)
Q Consensus 156 q~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~-----Rr~vmi~~d~~q~~~v~ls 229 (598)
.+..-+. .+...+++-++-+..+ |...++.+.....+|+.+ -|+.|.++||++ ||+.|+...++.. +
T Consensus 35 y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~---~-- 107 (468)
T TIGR00788 35 LFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGS---A-- 107 (468)
T ss_pred HHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHH---H--
Confidence 3444445 7888888888888888 999998888889999987 777999999997 7777776644311 0
Q ss_pred HHHHHHHhhhccCCccchHHHHHH-HHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHH---HHHHHHHHH
Q 007555 230 AAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAV---LNRIDLLCE 305 (598)
Q Consensus 230 ~~~l~~~~~~~~~~~~~l~~~l~v-v~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~---l~~id~~~~ 305 (598)
.. .......+ +. ..+++ ..++.+......+++...-+ -| ..+++ + ...|+. .-....+..
T Consensus 108 -~~-~~~l~~~~--~~---~~~~~~~~~l~~~~~a~~dv~~da~~-~e----~~~~~---~-~~~~~~~s~~~~~~~~G~ 171 (468)
T TIGR00788 108 -IL-YGLLPGKV--SS---AKVAAAFIFLAALAKALYDVLVDSLY-SE----RIRES---P-SAGPSLVSWMWGASATGG 171 (468)
T ss_pred -HH-HHhccccc--ch---HHHHHHHHHHHHHHHHHHHHhHHHHH-hh----hhhcC---C-CcCCCeeeHHHHHHHHHH
Confidence 11 11111111 11 12222 33444555555565553322 12 22221 1 222322 223344789
Q ss_pred HhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-cccccccccCCCCCCCCCCCccchhhhHH
Q 007555 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLD-RAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (598)
Q Consensus 306 i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (598)
++|+.++|.+....+....+.+.++..+.. . .....+ ++.+ ..++...++... ... ..........+
T Consensus 172 ~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~----~---~~~~~~--~E~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~ 239 (468)
T TIGR00788 172 LISSLLGGPLLDKTLTRILFLITAALLLLQ----L---FVSNLS--KERRAFVRPRIGTYLEM--NMA-LLTLGVLANVK 239 (468)
T ss_pred HHHHHHHHHHHHhcCcchHHHHHHHHHHHH----H---HHHHhc--ccccccccccccccchh--hhh-hhhhhHHHHHH
Confidence 999999999998777654333322211111 1 011111 1111 000000000000 000 00000000112
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHH-HHHhhhhhhHHHHHHH---HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007555 385 AIKLGWKEYMQQPVLPASLAYVLL-CLNVVLTPGSLMTAFL---TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (598)
Q Consensus 385 ~i~eG~~~~~~~pvll~~l~~~lL-~~~vll~f~~l~~~yl---~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg 460 (598)
+...+++..+++|.+...+++.++ |... .+.....|. ..+|+++..+|.+.+.+++++++|..+++++.||++
T Consensus 240 ~~~~~l~~~l~~~~i~~~l~fifl~~~~~---~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~ 316 (468)
T TIGR00788 240 VQILGLRGAIQLLEIAKPLIFIFLSYANL---PGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFP 316 (468)
T ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHhhc---CCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 222344445777877665555555 4322 222222221 258999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH--HhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHH
Q 007555 461 ILKAGAAGLIFQASLLAMAVAV--YWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISV 538 (598)
Q Consensus 461 ~~r~g~~~l~~q~~~L~~~v~~--~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl 538 (598)
..+...++......+...-... -|.......... ...+..++..++.....++.+.++++.+|++..|..+|+.+++
T Consensus 317 ~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~ 395 (468)
T TIGR00788 317 YRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEV-FVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASI 395 (468)
T ss_pred HHHHHHHHHHHHHHHHhCceeeeeccccccCCCCee-eeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHH
Confidence 8776655443322111000000 010000000010 1111112222233345677899999999999999999999999
Q ss_pred HHHHHHHHH
Q 007555 539 ASLVESVML 547 (598)
Q Consensus 539 ~~~~~ll~~ 547 (598)
.++...++.
T Consensus 396 ~~lg~~v~~ 404 (468)
T TIGR00788 396 LHLGSSVSG 404 (468)
T ss_pred HHHHHHHHH
Confidence 988864443
No 77
>PRK09952 shikimate transporter; Provisional
Probab=99.26 E-value=3.2e-08 Score=108.41 Aligned_cols=132 Identities=14% Similarity=0.048 Sum_probs=74.9
Q ss_pred HHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHH
Q 007555 418 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF 496 (598)
Q Consensus 418 ~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~ 496 (598)
..++.|+. +.|+++.....+....++.++++..+.+++.+|+|..|...++......+... ........ .....+
T Consensus 271 ~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~ 346 (438)
T PRK09952 271 AFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFP--FFMALEAQ--SIFWIV 346 (438)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH--HHHHHHcC--ChHHHH
Confidence 45566765 47888876665555667777888889999999999877655443222111100 01111110 111111
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHH-H-HHHHHHhhhhcc
Q 007555 497 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-V-ESVMLGVAIIAN 554 (598)
Q Consensus 497 ~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~-~-~ll~~~~~i~~~ 554 (598)
..+..+..++..........+..|..|.+.|+...+....+... . -..+++.+.+.+
T Consensus 347 -~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~ 405 (438)
T PRK09952 347 -FFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVT 405 (438)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222222233445667889999999999998887766552 2 245666666554
No 78
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.25 E-value=1.8e-08 Score=109.81 Aligned_cols=330 Identities=14% Similarity=0.090 Sum_probs=181.3
Q ss_pred HHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeec----cCCchH-HHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007555 168 FAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMD----HSPRIP-AYICLNTVQAAAQLLSAAMIIHAHTVIP 241 (598)
Q Consensus 168 fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvD----R~~Rr~-vmi~~d~~q~~~v~ls~~~l~~~~~~~~ 241 (598)
.-++-|..+..+ ++..+|+..++..+--.+..|+.|.+.| |++||| .|...-+. .+++..+ .+ ..++
T Consensus 22 ~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~----~~~~~~l-lf--~~~p 94 (428)
T PF13347_consen 22 SYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAIL----LALSFFL-LF--SPPP 94 (428)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHH----HHHHHHH-hh--cccc
Confidence 344455566678 9999999998888888999999999999 787666 44433221 1222212 22 1111
Q ss_pred -CCccchHHHH-HHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhh
Q 007555 242 -TSSSMLLHPW-FFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY 319 (598)
Q Consensus 242 -~~~~~l~~~l-~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~ 319 (598)
+.+......| ++..++....-+++++.+. .+.|.+.++ +++-++.++..+....+..++...+.+.++..+
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~-----al~~~lt~~--~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~ 167 (428)
T PF13347_consen 95 AGLSFTAKLVWLFVFYILFDIAYTFVQIPYN-----ALIPELTPD--PDERTRLSSWRMIFSMIGSLLASFLAPILVSWF 167 (428)
T ss_pred chhhhhhHHHHHHHHHHHHHHhhhhccCchh-----hcCcccccc--HhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 0111111112 2223333444444444443 255667764 347888888888888888877888888887766
Q ss_pred chh----HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhc
Q 007555 320 EPV----TCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQ 395 (598)
Q Consensus 320 ~~~----~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~ 395 (598)
+.. ..........+...+..+ .....+ ++ ++++. + + + .....+++.++..++
T Consensus 168 g~~~~~~~~~~~~~v~~iv~~v~~~---i~~~~~--ke--~~~~~-~-------~---~------~~~~~~~~~~~~~~~ 223 (428)
T PF13347_consen 168 GGGDTSNGYRWMALVLAIVGLVFFL---ITFFFV--KE--RSVEV-T-------E---Q------EKKISLRDSLRSLFR 223 (428)
T ss_pred ccCccchHHHHHHHHHHHHHHHHhh---hhhhee--ee--ccccc-c-------c---c------ccccccccchhhhcc
Confidence 532 111211111111111111 111111 11 00000 0 0 0 001124566788889
Q ss_pred CCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 007555 396 QPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQAS 474 (598)
Q Consensus 396 ~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~ 474 (598)
||.++..+...++.........+..+.|.+. .|.+ ...+.+..+..++++++..+.+++.||+|..|....+......
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAAL 302 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHH
Confidence 9988875555444332212334455556554 5555 6788888999999999999999999999988876655443221
Q ss_pred HHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCC-------ccchhHHHHHHHHHHHHH
Q 007555 475 LLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPS-------SKANLIGTTEISVASLVE 543 (598)
Q Consensus 475 ~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~-------~~rGRV~sv~~sl~~~~~ 543 (598)
..+...+.+.. + ...+....++.++|...+.....+++-+.++. +.-|.++|+.....+...
T Consensus 303 ---~~~~~~~~~~~-~---~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~ 371 (428)
T PF13347_consen 303 ---GFLLLFFLGPG-S---PWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQ 371 (428)
T ss_pred ---HHHHHHHHHhh-h---HHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHH
Confidence 11112222210 1 11122233344455555666777777777764 345888888777777664
No 79
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.23 E-value=1.5e-07 Score=102.58 Aligned_cols=151 Identities=9% Similarity=-0.034 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHH
Q 007555 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (598)
Q Consensus 149 f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ 227 (598)
|..+...-++--+.+.+....+|-+. +..+ |..+.+.......+..++.++++|.+.||++||++++..-++..+.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~-~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g-- 81 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQ-QAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALG-- 81 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH--
Confidence 34444444555566666666677664 4455 9999999999999999999999999999999999998776543322
Q ss_pred HHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHh
Q 007555 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (598)
Q Consensus 228 ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~ 307 (598)
+.+....... .+ .+.+++..++.|+...+..++.+..+. .+.++ ++-.+..+..+....+...+
T Consensus 82 --~~l~~~~~~~----~~--~~~~l~~~~l~G~g~g~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~lG~~~ 145 (410)
T TIGR00885 82 --AFLFWPAAEI----MN--YTLFLVGLFILTAGLGFLETAANPYIL-----VMGPE---STATRRLNLAQSFNPFGSII 145 (410)
T ss_pred --HHHHHHHHhh----cc--HHHHHHHHHHHHhhHHHHHhhhhHHHH-----HHCCH---hHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 11 233444445555555555444433221 14443 25677888889999999999
Q ss_pred hHHHHHHHHhh
Q 007555 308 GASLFGILLSK 318 (598)
Q Consensus 308 GP~lgGlL~s~ 318 (598)
||.+++.++..
T Consensus 146 g~~i~~~l~~~ 156 (410)
T TIGR00885 146 GMVVAQQLILS 156 (410)
T ss_pred HHHHHHHHHhc
Confidence 99999998753
No 80
>TIGR00898 2A0119 cation transport protein.
Probab=99.23 E-value=1.8e-08 Score=111.65 Aligned_cols=323 Identities=14% Similarity=0.054 Sum_probs=155.6
Q ss_pred hhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHH
Q 007555 181 LLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGA 260 (598)
Q Consensus 181 ~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~ 260 (598)
....++...+..+..++.+++.|.++||++||++++.+.++..+. ..+..+ .. + .+.+++.-++.|.
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~----~~~~~~--~~-----~--~~~~~~~r~l~G~ 192 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVS----GVLTAF--SP-----N--YTVFLVFRLLVGM 192 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHH----HHHHHH--cc-----c--HHHHHHHHHHHHh
Confidence 667788888888899999999999999999999998776543222 111111 11 1 2334444444554
Q ss_pred HHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHH
Q 007555 261 VERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMI 340 (598)
Q Consensus 261 i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~ 340 (598)
......+.... +-.| .++++ +..++++..+....+..+++|.+++.+..+ . ....+... ..++..+
T Consensus 193 ~~~~~~~~~~~-~~~e----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~w-r--~~~~~~~i---~~~~~~~ 258 (505)
T TIGR00898 193 GIGGIWVQAVV-LNTE----FLPKK---QRAIVGTLIQVFFSLGLVLLPLVAYFIPDW-R--WLQLAVSL---PTFLFFL 258 (505)
T ss_pred hccchHHHHHH-Hhhe----ecChh---hhHHHHHHHHHHHHHHHHHHHHHHHHhhHH-H--HHHHHHHH---HHHHHHH
Confidence 44433333322 2233 44442 567888888888888899999988877652 1 11111111 1111111
Q ss_pred HHHHHHHhhccccc--ccccccc--c---ccCCCCCCCCCCCccchhhhHHH---H--HHHHHHHhcCCchHHHHHHH-H
Q 007555 341 ILTWFTNKISSGVL--DRAKCSQ--S---CCRTSNEGPVPDADNIVDVGIEA---I--KLGWKEYMQQPVLPASLAYV-L 407 (598)
Q Consensus 341 l~~~li~rv~~~~l--~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~---i--~eG~~~~~~~pvll~~l~~~-l 407 (598)
..+.+.+ .|.. .+.+.++ + +..+.+....++. .......++ - +.+++..+++|.++..+... .
T Consensus 259 -~~~~~~e--sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 334 (505)
T TIGR00898 259 -LSWFVPE--SPRWLISQGRIEEALKILQRIAKINGKKLPAE-VLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMM 334 (505)
T ss_pred -HHHhcCC--ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHH-HHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHH
Confidence 1011110 0000 0000000 0 0000000000000 000000000 0 13566778888776644332 2
Q ss_pred HHHHhhhhhhH-HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 007555 408 LCLNVVLTPGS-LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSG 486 (598)
Q Consensus 408 L~~~vll~f~~-l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g 486 (598)
.++.. .+.. .+..+....+.+..... ...++.++.|.++.+++.+|+|..+...++......+ .+......
T Consensus 335 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~---~l~~~~~~ 406 (505)
T TIGR00898 335 LWFTT--AFSYYGLVLDLGNLGGNIYLDL---FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVA---LLLLLFVP 406 (505)
T ss_pred HHHHH--HHHHHHHhccccccCCChHHHH---HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH---HHHHHHcC
Confidence 22221 1111 11112223455543333 3445667778888888999988766555433222111 11111111
Q ss_pred ccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH
Q 007555 487 SLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 546 (598)
Q Consensus 487 ~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~ 546 (598)
.. ....... ...+..++..........+.+|..|++.||+..|+.++...+...++
T Consensus 407 ~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~ 462 (505)
T TIGR00898 407 VD--LYFLRTA--LAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIIS 462 (505)
T ss_pred CC--chHHHHH--HHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHH
Confidence 11 1111111 11122222222334556788999999999999999998887775333
No 81
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.22 E-value=1.8e-08 Score=110.42 Aligned_cols=338 Identities=10% Similarity=0.006 Sum_probs=152.9
Q ss_pred ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHh-hhccCCccchHHHHHHHHHHH
Q 007555 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAH-TVIPTSSSMLLHPWFFVLVLA 258 (598)
Q Consensus 180 S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~-~~~~~~~~~l~~~l~vv~~ll 258 (598)
+....+....+..+..++.+++.|.+.||++|||++..+.++-.+...+.. ...+.. .... .+....+.+++.=++.
T Consensus 53 ~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~-~~~~~~~~~~~-~~~~~~~~l~~~R~l~ 130 (479)
T PRK10077 53 ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSA-WPEFGFTSIGP-DNTGYVPEFVIYRIIG 130 (479)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-hhccccccccc-cchhHHHHHHHHHHHH
Confidence 677888888888999999999999999999999999887654322211110 000000 0000 0010111222222334
Q ss_pred HHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHh--------hhchhHHHHHHHH
Q 007555 259 GAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS--------KYEPVTCLKFAAG 330 (598)
Q Consensus 259 g~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s--------~~~~~~~l~~~~~ 330 (598)
|.......+... ++-.|| .+++ +..++-+..+....+..+++|.+++.+.. ..|......+...
T Consensus 131 G~~~g~~~~~~~-~~i~e~----~~~~---~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~ 202 (479)
T PRK10077 131 GIGVGLASMLSP-MYIAEI----APAH---IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAI 202 (479)
T ss_pred hhhHhHHhhHHH-HHHHhh----CChh---hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHH
Confidence 443333333332 222454 3332 56677777777777778888877766542 1232221221111
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccc---cccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhc-C-CchHH---H
Q 007555 331 LIMWSLPVMIILTWFTNKISSGVLDRA---KCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQ-Q-PVLPA---S 402 (598)
Q Consensus 331 ~~~~S~~~~~l~~~li~rv~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~-~-pvll~---~ 402 (598)
..++. . .....+ |+.++. +...++.+... +.... ....+...+++++.++.-.+ . +.+.. .
T Consensus 203 ---~~~~~-~---~~~~~l--~~s~~~l~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (479)
T PRK10077 203 ---PALLF-L---MLLYFV--PETPRYLMSRGKQEQAEGIL-RKIMG-NTLATQALQEIKHSLDHGRKTGGKLLMFGVGV 271 (479)
T ss_pred ---HHHHH-H---HHHHcC--CCCcHHHHHcCCHHHHHHHH-HHHcC-ChhHHHHHHHHHHHHHHhhhhhhhhcchhHHH
Confidence 11111 1 111111 211110 00000000000 00000 00011222333333221010 1 11110 0
Q ss_pred HHHHHH--HHHhhhhhhH---HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 007555 403 LAYVLL--CLNVVLTPGS---LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLA 477 (598)
Q Consensus 403 l~~~lL--~~~vll~f~~---l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~ 477 (598)
+..... .+.....+.. ..+.+..+.|++....+......++++++++++.+++.+|+|..+...++......+..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~ 351 (479)
T PRK10077 272 IVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMF 351 (479)
T ss_pred HHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHH
Confidence 111111 1110001111 11223345788776666666677788889999999999999876655544332211111
Q ss_pred HHHHHHhhcccccchhHHHHHHHHHHHhhhhh-hhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH
Q 007555 478 MAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM-SYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 543 (598)
Q Consensus 478 ~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~-~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ 543 (598)
. ......... ...+... ++.....+.. .+......+.+|..|+++||+..|+..++++...
T Consensus 352 ~-l~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~ 413 (479)
T PRK10077 352 S-LGTAFYTQA---PGIVALL-SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIAN 413 (479)
T ss_pred H-HHHHHhcCc---ccHHHHH-HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHH
Confidence 1 111111111 1111111 1111111111 1234457889999999999999999999888775
No 82
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.21 E-value=8.3e-08 Score=106.67 Aligned_cols=130 Identities=13% Similarity=0.031 Sum_probs=75.0
Q ss_pred HHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHh-hcccccchhHH
Q 007555 418 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYW-SGSLSQQNPLL 495 (598)
Q Consensus 418 ~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~-~g~~~~~~~~~ 495 (598)
..++.|+. ..|+++...+.......++.++|..+.+++.+|+|..+....+... +...+...+. .... ....+
T Consensus 271 ~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~ 345 (490)
T PRK10642 271 TYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVA---LFVLAIPAFILINSN--VIGLI 345 (490)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH---HHHHHHHHHHHHhCC--CHHHH
Confidence 45666775 4699888778777888889999999999999999987655433221 1111111111 1111 11111
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH-HHHHHHhhhhcc
Q 007555 496 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV-ESVMLGVAIIAN 554 (598)
Q Consensus 496 ~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~-~ll~~~~~i~~~ 554 (598)
..+.++..++...+.-....+..+..|++.||+..|+...+.... .+.+++.+.+..
T Consensus 346 --~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~ 403 (490)
T PRK10642 346 --FAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVE 403 (490)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111112211223344566678899999999888765555544 356666665544
No 83
>PRK11462 putative transporter; Provisional
Probab=99.19 E-value=5.1e-07 Score=99.98 Aligned_cols=270 Identities=10% Similarity=-0.007 Sum_probs=145.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccC----CchH-HHHHHHHHHHHHHH
Q 007555 154 ACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS----PRIP-AYICLNTVQAAAQL 227 (598)
Q Consensus 154 ~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~----~Rr~-vmi~~d~~q~~~v~ 227 (598)
.|.+-..+-..+...=+..|..+..| ++..+|..-++..+-=.+.-|+.|.++||. +||| -|...-+ ..+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i----~~~ 91 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGAL----PFG 91 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHH----HHH
Confidence 44444444444444445556667778 888888888887777789999999999974 4544 4443322 212
Q ss_pred HHHHHHHHHhhhccCCccchHHHHHH-HHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHH
Q 007555 228 LSAAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEI 306 (598)
Q Consensus 228 ls~~~l~~~~~~~~~~~~~l~~~l~v-v~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i 306 (598)
+++.+ +| ..+. .+......|+. .-.+....-++.++.+.. |.|.+.++ +++-++.++.-+....+..+
T Consensus 92 i~~~l-lf--~~p~-~s~~~~~~y~~~~~~~~~~~~t~~~ipy~a-----l~~~lt~d--~~eRt~l~s~r~~~~~iG~~ 160 (460)
T PRK11462 92 IVCVL-AY--STPD-LSMNGKMIYAAITYTLLTLLYTVVNIPYCA-----LGGVITND--PTQRISLQSWRFVLATAGGM 160 (460)
T ss_pred HHHHH-HH--hCCC-CCcchHHHHHHHHHHHHHHHHHHHhccHHH-----HHHHhcCC--HHHHHHHHHHHHHHHHHHHH
Confidence 23222 22 1211 11111112222 222334444555554433 45557653 46888999998888888888
Q ss_pred hhHHHHHHHHhhhchh---H-HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhh
Q 007555 307 AGASLFGILLSKYEPV---T-CLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVG 382 (598)
Q Consensus 307 ~GP~lgGlL~s~~~~~---~-~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (598)
++|.++..+....|-. . .........+...+... .+... .++ +.+++ +++ .
T Consensus 161 ~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~---i~~~~--~kE--~~~~~------------~~~----~-- 215 (460)
T PRK11462 161 LSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLA---FCFFT--TKE--RVEAP------------PTT----T-- 215 (460)
T ss_pred HHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHH---HHHhc--cee--ccCCC------------ccC----C--
Confidence 8888887777655411 0 11111111111111110 11111 111 10000 000 1
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007555 383 IEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 461 (598)
Q Consensus 383 ~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~ 461 (598)
.+++.++..++++.++..+...++++.......+.++.|.+. .| ++...+.+.+..++++++|+.+.+++.+|++.
T Consensus 216 --~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gk 292 (460)
T PRK11462 216 --SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCK 292 (460)
T ss_pred --CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh
Confidence 145667778888888765444333322212344455555554 34 34466777888889999999999999999886
Q ss_pred hHHHH
Q 007555 462 LKAGA 466 (598)
Q Consensus 462 ~r~g~ 466 (598)
.+...
T Consensus 293 k~~~~ 297 (460)
T PRK11462 293 VTIFW 297 (460)
T ss_pred HHHHH
Confidence 55544
No 84
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.17 E-value=2.8e-07 Score=102.92 Aligned_cols=162 Identities=10% Similarity=-0.086 Sum_probs=103.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeecc-CCchHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDH-SPRIPAYICLNTVQ 222 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR-~~Rr~vmi~~d~~q 222 (598)
|+|.++.++..++...++-....--++.|+....+ +....+.......+-..++.+++|.+.|| ++|||+++...++.
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~ 91 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVL 91 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHH
Confidence 67788999999999888888888888888887777 66555544444444455667789999999 99999998877653
Q ss_pred HHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHH
Q 007555 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (598)
Q Consensus 223 ~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~ 302 (598)
.+. +..+ .+ ... .. ..+++..++.+....+..+.... +-.| ..++++ ++..++-+.....-.
T Consensus 92 ~~g---~~~~-~~--~~~---~~---~ll~~~~~l~~ig~g~~~~~~~~-li~~----~~p~~~-~~~~~~~~~~~~~~n 153 (489)
T PRK10207 92 AIG---YFMT-GM--SLL---KP---DLIFIALGTIAVGNGLFKANPAS-LLSK----CYPPKD-PRLDGAFTLFYMSIN 153 (489)
T ss_pred HHH---HHHH-HH--hcc---ch---hHHHHHHHHHHhccccccCCHHH-HHHH----hcCCCc-hhhhcchhHHHHHHH
Confidence 332 1111 11 110 01 12333344444444444433332 2234 333331 245567777777888
Q ss_pred HHHHhhHHHHHHHHhhhchhHH
Q 007555 303 LCEIAGASLFGILLSKYEPVTC 324 (598)
Q Consensus 303 ~~~i~GP~lgGlL~s~~~~~~~ 324 (598)
++..+||.++|.+....|....
T Consensus 154 ig~~~g~~l~g~l~~~~gw~~~ 175 (489)
T PRK10207 154 IGSLISLSLAPVIADKFGYSVT 175 (489)
T ss_pred HHHHHHHHHHHHHHHhhChHHH
Confidence 8999999999999988885443
No 85
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.13 E-value=7.3e-07 Score=99.86 Aligned_cols=165 Identities=10% Similarity=-0.087 Sum_probs=100.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeecc-CCchHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDH-SPRIPAYICLNTVQ 222 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR-~~Rr~vmi~~d~~q 222 (598)
+++.+..++...+...++-.....-++.|+....+ |....+..............+++|.+.|| ++||+++...-++.
T Consensus 19 ~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~ 98 (500)
T PRK09584 19 QPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVL 98 (500)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 45678889999999999888888888889877777 76655444443333444556789999999 59999888765432
Q ss_pred HHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHH
Q 007555 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (598)
Q Consensus 223 ~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~ 302 (598)
.+. .. ...... .. .+.+++..++.+....++.+.... +-.+| .+++ +.+..++-+.......
T Consensus 99 ~ig----~~--l~~~~~----~~--~~~l~~~~~l~gig~g~~~~~~~~-l~~~~----f~~~-~~~~~~~~~~~~~~~~ 160 (500)
T PRK09584 99 AIG----YA--LVAWSG----HD--AGIVYMGMATIAVGNGLFKANPSS-LLSTC----YEKD-DPRLDGAFTMYYMSIN 160 (500)
T ss_pred HHH----HH--HHHHhc----cc--HHHHHHHHHHHHHhhhcccCCHHH-HHHHh----cCCC-chhhhhcchHHHHHHH
Confidence 221 11 111111 01 112233333444444444333322 22332 2332 2245566677777788
Q ss_pred HHHHhhHHHHHHHHhhhchhHHHHH
Q 007555 303 LCEIAGASLFGILLSKYEPVTCLKF 327 (598)
Q Consensus 303 ~~~i~GP~lgGlL~s~~~~~~~l~~ 327 (598)
++..+||.++|.+....|.......
T Consensus 161 iG~~~gp~i~g~l~~~~g~~~~F~i 185 (500)
T PRK09584 161 IGSFFSMLATPWLAAKYGWSVAFAL 185 (500)
T ss_pred HHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 8999999999999887775543333
No 86
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.10 E-value=1.1e-06 Score=95.73 Aligned_cols=187 Identities=14% Similarity=0.067 Sum_probs=113.2
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcC-CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 007555 389 GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRG-LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA 467 (598)
Q Consensus 389 G~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg-~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~ 467 (598)
.++ ++|+|.++.-+..+.+....-..+.+....|+++.| ++....|...+.+.+.++.-=+..+++.||+|..+....
T Consensus 200 ~~~-llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~ 278 (400)
T PF03825_consen 200 ALK-LLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLL 278 (400)
T ss_pred HHH-HhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 344 778887765444433332111345556677888887 888889999999999999999999999999998877665
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH--HH
Q 007555 468 GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE--SV 545 (598)
Q Consensus 468 ~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~--ll 545 (598)
+...... =...+...+.+......+...+..+-++..-.+-.....++.+.+|++.|++..++..++.++.- .+
T Consensus 279 a~~~~~v----R~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG 354 (400)
T PF03825_consen 279 ALVAYAV----RWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIG 354 (400)
T ss_pred HHHHHHH----HHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHH
Confidence 4322111 00111111110011111111112222222335677889999999999999999999999988773 55
Q ss_pred HHHhhhhccCcc---hhHHHHHHHHHHHHHHHHHHHHH
Q 007555 546 MLGVAIIANDVS---HFGFLATLSLLSVVGAAWMFCHW 580 (598)
Q Consensus 546 ~~~~~i~~~~~~---~f~~l~l~S~~~V~~a~~l~~~~ 580 (598)
+++.|.+.+... .|.+..+..+.++.........+
T Consensus 355 ~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 355 SLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred HHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 667777776543 33444444444444333333333
No 87
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.03 E-value=2.2e-06 Score=94.55 Aligned_cols=360 Identities=13% Similarity=0.047 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCch----H-HHHHHHHHHHHHHHHHH
Q 007555 157 LAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRI----P-AYICLNTVQAAAQLLSA 230 (598)
Q Consensus 157 ~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr----~-vmi~~d~~q~~~v~ls~ 230 (598)
+-+.+.-.+...=+.-|-.+..| |+..+|..-++..+-=.+.-|+.|.++||.++| | -+...-+ ..++.+
T Consensus 22 ~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~i----p~~i~~ 97 (467)
T COG2211 22 FASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAI----PFAIVA 97 (467)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhH----HHHHHH
Confidence 33333334444444555567777 888888888888888899999999999987543 3 3332221 212222
Q ss_pred HHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHH
Q 007555 231 AMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 310 (598)
Q Consensus 231 ~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~ 310 (598)
.+ .|. .++-+...-....++.-++++..-++-+..+. .+.|++..+ +++.++.|++-+....++.++--.
T Consensus 98 ~l-~F~--~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~-----al~~~iT~d--~~ER~~l~s~R~~~~~~g~~l~~~ 167 (467)
T COG2211 98 VL-LFI--TPDFSMTGKLIYALVTYMLLGLGYTLVNIPYG-----ALGPEITQD--PQERASLTSWRMVFASLGGLLVAV 167 (467)
T ss_pred HH-HHc--CCCcccCcchHHHHHHHHHHHHHHHheeCchh-----hcchhhcCC--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 221 11101011111122333334433333333332 256667653 568899999999888888777777
Q ss_pred HHHHHHhhhchhH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHH
Q 007555 311 LFGILLSKYEPVT---CLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIK 387 (598)
Q Consensus 311 lgGlL~s~~~~~~---~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 387 (598)
+.+.+++.++... +.....+. +.+...++..++...++++ ..+.++ .. ++...+.+
T Consensus 168 ~~~plv~~~g~~~~~~g~~~~~~~--~~vi~~i~~l~~~~~v~ER----~~~~~~-----------~~----~~~~~~~~ 226 (467)
T COG2211 168 LFPPLVKLFGGGDKALGYQGTALV--LGVIGVILLLFCFFNVKER----VVETQP-----------TK----TGVKLKLK 226 (467)
T ss_pred HHHHHHHHhCCCcchhhHHHHHHH--HHHHHHHHHHHHHHHhhcc----cCcccc-----------Cc----ccccccHH
Confidence 7777777766432 22222221 2222222222333333211 110000 00 01223445
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 007555 388 LGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGA 466 (598)
Q Consensus 388 eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~ 466 (598)
+-+...++++.++..+...++.+......++.++.|.+ .+|.++...+........+.+++..+.|++.||+|..+...
T Consensus 227 ~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~ 306 (467)
T COG2211 227 DSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFL 306 (467)
T ss_pred HHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH
Confidence 55667788888876555444433332224456666666 48888888888889999999999999999999999888777
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCc-------cchhHHHHHHHHH
Q 007555 467 AGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS-------KANLIGTTEISVA 539 (598)
Q Consensus 467 ~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~-------~rGRV~sv~~sl~ 539 (598)
++... ..+..+..++.+. +...++++ ..+...+|....+....+++=+.++.+ .-|-++|.+....
T Consensus 307 ~~~~~---~~i~~~~~~f~~~--~~~~l~~~--~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~ 379 (467)
T COG2211 307 IGLLL---LAVGYLLLYFTPA--GSVVLIVV--ALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFR 379 (467)
T ss_pred HHHHH---HHHHHHHHHhhcC--cchHHHHH--HHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHH
Confidence 65331 1122223333331 11222222 222333454455666666666666543 3345555544444
Q ss_pred HHHH-----HHHHHhhhhccCcch
Q 007555 540 SLVE-----SVMLGVAIIANDVSH 558 (598)
Q Consensus 540 ~~~~-----ll~~~~~i~~~~~~~ 558 (598)
.+.. ..+.+++.++-.|+.
T Consensus 380 K~g~ala~~~~g~~L~~~Gyv~~~ 403 (467)
T COG2211 380 KLGLALAGFIPGWILGAIGYVPNV 403 (467)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCc
Confidence 3332 233344455555555
No 88
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.02 E-value=3.5e-07 Score=99.57 Aligned_cols=362 Identities=13% Similarity=0.102 Sum_probs=180.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCC-chHHHHHHHHH
Q 007555 144 AHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSP-RIPAYICLNTV 221 (598)
Q Consensus 144 ~r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~-Rr~vmi~~d~~ 221 (598)
.++++|+.+-...+.--+.-.++.==+|+|+.+.-| |...+|+.-.+..+..+++.|+.|.+.||.. ||++++..-+
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~- 82 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAI- 82 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHH-
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHH-
Confidence 355677766555555555544444444667777678 9999999999999999999999999999997 5555543322
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHH----HHH
Q 007555 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKAN----AVL 297 (598)
Q Consensus 222 q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aN----a~l 297 (598)
+. ++.++...+.... ++...+++.+++-+..-.++-.+....+|. .+ ++..|.| ++.
T Consensus 83 --l~-~l~~pff~~v~~p------ll~~n~~lg~iig~i~l~~~f~~~~~~~Ea-----~~-----er~sr~~~feYG~~ 143 (412)
T PF01306_consen 83 --LL-LLFGPFFIYVFGP------LLQSNFWLGAIIGGIYLGLVFNAGVPLSEA-----YA-----ERVSRRNGFEYGRA 143 (412)
T ss_dssp --HH-HTCHHHHHHTHHH------HHHTT-HHHHHHTTTTTTTTTTTHHHHHHH-----HH-----HHHHHHHSS-HHHH
T ss_pred --HH-HHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHcccchHHHH-----HH-----HHHHHHhcCCcchH
Confidence 11 1112221221100 000001111111111001111111112221 11 1233333 566
Q ss_pred HHHHHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCcc
Q 007555 298 NRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADN 377 (598)
Q Consensus 298 ~~id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 377 (598)
|.=-+++-.++..++|.+++. ++....+...+ ......+. ....| | +++++.+. .+ .. .. +
T Consensus 144 R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~----~~~il~ll-l~~~~---~--~~~~~~~~--~~---~~-~~-~- 204 (412)
T PF01306_consen 144 RMWGSIGFAIASLLAGILFNI-NPNIIFWIASA----AAIILLLL-LLLLK---P--DVPPQAEV--AD---AL-GA-K- 204 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH----HHHHHHHH-HHSS--------SSSSS-S--ST---TS-SS---
T ss_pred HHHhhHHHHHHHHHhheeeee-CccHHHHHHHH----HHHHHHHH-HHHcC---C--cCchhhhh--hc---cc-cc-C-
Confidence 777789999999999999984 43332332211 11111111 11122 1 11111000 00 00 00 0
Q ss_pred chhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH----hcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 007555 378 IVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT----QRGLNPSIIGGFSGLCASMGVAATFLSA 453 (598)
Q Consensus 378 ~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~----~lg~s~~~iG~~~g~gavgGLlGtl~~~ 453 (598)
.+.. .+++ ....+|.|.+...+++....-.....++.+...|.+ +.+.+...+|...+.+.+.+.+.=..+|
T Consensus 205 -~~~~--~~~~-~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p 280 (412)
T PF01306_consen 205 -KDKV--SLKD-VLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSP 280 (412)
T ss_dssp --------HHH-HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCC--cHHH-HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHH
Confidence 0010 1222 344778887765444333222222346767777765 3466778899999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHH
Q 007555 454 YLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGT 533 (598)
Q Consensus 454 ~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~s 533 (598)
++.||+|..+..+++.. ++++=....+... .+..+.. .=.+-.+-..++-+....++++..|++...++..
T Consensus 281 ~li~rig~k~~Lllag~------i~~iRi~~~~~~~--~~~~i~~-~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~ 351 (412)
T PF01306_consen 281 WLINRIGAKNLLLLAGV------IMAIRIIGSGFAT--NPWVISL-IKLLHALEFPLLLVAAFKYITAHFDKRLSATLYL 351 (412)
T ss_dssp HHHHHH-HHHHHHHHHH------HHHHHHHHHHT----SHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHH
T ss_pred HHHHhcChHhHHHHHHH------HHHHHHHHHhhhc--chHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHH
Confidence 99999999876654321 1110011111100 1111111 1112223344667888999999999987777666
Q ss_pred HHHHHHHHH--HHHHHHhhhhccCcchhH
Q 007555 534 TEISVASLV--ESVMLGVAIIANDVSHFG 560 (598)
Q Consensus 534 v~~sl~~~~--~ll~~~~~i~~~~~~~f~ 560 (598)
+...+.... ..++...|.. .|++|
T Consensus 352 v~~~~~~~~~~~i~s~~~G~l---yd~~G 377 (412)
T PF01306_consen 352 VGFQFAKQIGIIILSPLAGYL---YDRIG 377 (412)
T ss_dssp HHHTTTHHHHHHHHHHHHHHH---HHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHhh---HhhcC
Confidence 654333333 2344444444 45554
No 89
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.01 E-value=1.2e-05 Score=89.17 Aligned_cols=151 Identities=6% Similarity=-0.035 Sum_probs=92.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 146 ~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
+|++..-|.+-+++.+.-.++.-..+-+.-...+ |..+.+.....-.+...++-.+.|.++||++.|+++..+-++-.+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 3678888888888887777777766665554577 888899888888888888878889999999999988776543211
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHH---
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID--- 301 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id--- 301 (598)
+.+...+...+..++ ++.+++.-++.|.....+.... ..+ +.|- ++ ++..++++.....-
T Consensus 113 ------~~~~~~~a~~~~~~s--~~~lli~r~l~Gigg~~f~~~~-~~v-s~wf----p~---~~rG~A~Gi~~g~G~~G 175 (462)
T PRK15034 113 ------PCVWLGIAVQNPNTP--FGIFIVIALLCGFAGANFASSM-GNI-SFFF----PK---AKQGSALGINGGLGNLG 175 (462)
T ss_pred ------HHHHHHHHHcccCCC--HHHHHHHHHHHHHHHHhHHHHH-HHH-HHHC----CH---hHhHHHHHHHHHHHhhH
Confidence 111111111100012 3455666666666544444333 223 3343 33 36778888885443
Q ss_pred -HHHHHhhHHHHH
Q 007555 302 -LLCEIAGASLFG 313 (598)
Q Consensus 302 -~~~~i~GP~lgG 313 (598)
.++++++|.+.+
T Consensus 176 ~~l~~~l~p~~i~ 188 (462)
T PRK15034 176 VSVMQLVAPLVIF 188 (462)
T ss_pred HHHHHHHHHHHHH
Confidence 344556666554
No 90
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.99 E-value=5.8e-07 Score=96.85 Aligned_cols=403 Identities=15% Similarity=0.101 Sum_probs=225.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
|-+.|.-.|.|...=-+.-.-+++|.|-++.+.-=|..++|+.+.+..+.+=+-=-..|.++||.|.|+.|-...+..++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai 106 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHH
Confidence 33457777888888888888889999877766544888899999998888888888899999999999988766543222
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
+ .+++. .. ++ .+...+..++.|..+...-++....+.. |-|. +||.... +.=+....+.
T Consensus 107 ~------nil~G--fs---~s--~~~~~~l~~lng~fQg~Gwpp~~~~i~~-Wfsr---~eRG~~~----siWn~shNiG 165 (448)
T COG2271 107 V------NILFG--FS---PS--LFLFAVLWVLNGWFQGMGWPPCARTITH-WFSR---KERGTWW----SIWNTSHNIG 165 (448)
T ss_pred H------HHHHh--hh---hH--HHHHHHHHHHHHHHhcCCCcHHHHHHHH-HcCc---cccCceE----EEehhhhhcc
Confidence 2 11221 11 12 2344555566777777777766555432 5542 3332222 2222233344
Q ss_pred HHhhHHHH--HHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cccccccCCCC-CCCCCCCccchh
Q 007555 305 EIAGASLF--GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRA-KCSQSCCRTSN-EGPVPDADNIVD 380 (598)
Q Consensus 305 ~i~GP~lg--GlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~-~~~~~~~~~~~-~~~~~~~~~~~~ 380 (598)
.-+.|++. |.+....+...++.+..++ +....+ +.+.+.+ +.|+.. -++.++.+++. +..+++..+..-
T Consensus 166 Gal~~~~~~la~~~~~~~w~~~f~~pgii---aiival---~~~~~~r-d~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~l 238 (448)
T COG2271 166 GALAPLVALLAFFAFHGGWRAAFYFPGII---AIIVAL---ILLFLLR-DRPQSEGLPPIEEYRGDPLEIYEEEKENEGL 238 (448)
T ss_pred cchHHHHHHHHHHHhccchhHHHHHHHHH---HHHHHH---HHHHHhC-CCccccCCCCHHHhhcCchhhhhhhccCCCc
Confidence 44444455 5555444433333332211 111111 2233331 111110 00000001000 000000000001
Q ss_pred hhHHHHHHHHHHHhcCCchHH-HHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007555 381 VGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRR 458 (598)
Q Consensus 381 ~~~~~i~eG~~~~~~~pvll~-~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rr 458 (598)
+.++. =++|+++||.+.. .++..++|.-= .....=.+.|+.+ .|++...-+...+..-++|+.|+++.+++..|
T Consensus 239 s~~~i---~~~YVL~Nk~iW~la~a~vfvYivR-~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDk 314 (448)
T COG2271 239 TAWQI---FVKYVLKNKLIWLLALANVFVYVVR-YGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDK 314 (448)
T ss_pred cHHHH---HHHHHHcChHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 12222 2688899997654 34445555432 1333457789886 79999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHH
Q 007555 459 LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISV 538 (598)
Q Consensus 459 lg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl 538 (598)
+--.|.+...+.+. +.+..++..+|..... ..++..+.....++.+..=+....-.-=|.+|.+--|...|.....
T Consensus 315 lfkgrR~p~~~i~~-~~i~~~~~~~w~~~~~---~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf 390 (448)
T COG2271 315 LFKGRRGPMALIFM-LLITASLVLYWLAPNG---SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLF 390 (448)
T ss_pred hcccccchHHHHHH-HHHHHHHHHHHcCCCc---cHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhH
Confidence 87665555444432 2334555566654321 1111111111111111111333444456889999999999999988
Q ss_pred HHHH--HHHHHHhhhhccCcchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 007555 539 ASLV--ESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLN 583 (598)
Q Consensus 539 ~~~~--~ll~~~~~i~~~~~~~f~~l~l~S~~~V~~a~~l~~~~l~~ 583 (598)
+++. .+....++.+.+...=.+..++..++++.+.+.+...|..+
T Consensus 391 ~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~~ 437 (448)
T COG2271 391 AYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNAE 437 (448)
T ss_pred HHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHhhc
Confidence 8884 24455556665553333444667777777766666666543
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=3.6e-08 Score=104.64 Aligned_cols=336 Identities=17% Similarity=0.074 Sum_probs=164.1
Q ss_pred ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHH-HHHH
Q 007555 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLA 258 (598)
Q Consensus 180 S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv-~~ll 258 (598)
+....|..+-.-.+-+.+-+|..|.+.||++||.++.+|.+.- +++.. +|+... + ...+++ =++.
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~v----a~s~l--l~~~S~-----~---F~afv~aR~l~ 131 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGV----ALSYL--LWALSR-----N---FAAFVLARFLG 131 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHH----HHHHH--HHHHHH-----H---HHHHHHHHHhh
Confidence 6777788888888889999999999999999999998886532 22221 232211 1 122333 1233
Q ss_pred HHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhh---chhHHHHHHHHHHHHH
Q 007555 259 GAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY---EPVTCLKFAAGLIMWS 335 (598)
Q Consensus 259 g~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~---~~~~~l~~~~~~~~~S 335 (598)
|+..-.-++.. ++-.| ++++ ++-.++-+.+....++.-++||++||.+-.+. |-.+...-...+.+..
T Consensus 132 Gi~kgnl~v~r--Aiisd----V~se---k~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a 202 (451)
T KOG2615|consen 132 GIFKGNLSVIR--AIISD----VVSE---KYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILA 202 (451)
T ss_pred hhccCchHHHH--HHHHh----hcCh---hhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHH
Confidence 33322222222 22234 5554 25668888999999999999999999997732 2111111111111111
Q ss_pred HHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHH------HHHHH-HH
Q 007555 336 LPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA------SLAYV-LL 408 (598)
Q Consensus 336 ~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~------~l~~~-lL 408 (598)
+.-.. ....++.++ ++.++..+++-... +..+ +++. ..++ +..+-.. ..|+|..+. .+.+- ++
T Consensus 203 ~~~v~---~~~~~lpET-L~~rk~~~~~~~~~-~~~~-~~~~-~~~~--~~~~~v~-~lrn~p~~~~i~~~~i~~l~~~l 272 (451)
T KOG2615|consen 203 AGDVT---FFPWFLPET-LPLRKRNDEHSTLQ-EAAD-DRLA-LLKF--ARIFKVA-ALRNPPLLDFISVLRIFGLHYFL 272 (451)
T ss_pred HHHHH---HHHHhCCcc-ccchhhcccccchh-hhhh-hhhh-hcch--hhhhhhh-hhcCccccchHHHHHHHHHHHHH
Confidence 11011 112222122 22111111100000 0000 0000 0000 0000111 134443332 11111 12
Q ss_pred HHHhhhhhhHHHHHHHH--hcCCChhHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 007555 409 CLNVVLTPGSLMTAFLT--QRGLNPSIIGGFSGLCASMGV-AATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS 485 (598)
Q Consensus 409 ~~~vll~f~~l~~~yl~--~lg~s~~~iG~~~g~gavgGL-lGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~ 485 (598)
|+.+ .+.......++. ..|+++.+.|-+....+++++ +...++|++.+-.|..++.+.. ...+....++.+-.
T Consensus 273 y~~l-~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~---~l~~~vP~~llls~ 348 (451)
T KOG2615|consen 273 YLEL-FSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLF---SLLLIVPAFLLLSL 348 (451)
T ss_pred HHHH-HHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHH---HHHHHHHHHHHHhc
Confidence 2222 222222333443 369999999998888888875 4666677776655544333221 11222222222211
Q ss_pred cccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccCcc
Q 007555 486 GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIANDVS 557 (598)
Q Consensus 486 g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~~~ 557 (598)
... +..+.++...-+-.+ ...-.+.+.++-+..|++.||.++|+.+|+...+- +++.+.|.++....
T Consensus 349 ~~~----~~~l~~~s~l~sf~~-A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~ 416 (451)
T KOG2615|consen 349 ART----PVVLYLGSTLKSFST-ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQ 416 (451)
T ss_pred ccc----chhhhHHHHHHHHHH-HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEec
Confidence 111 122222221111111 11123444555566799999999999999999996 55555566666543
No 92
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.91 E-value=2.1e-05 Score=87.65 Aligned_cols=153 Identities=12% Similarity=-0.037 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc----C-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 150 YALYACCLAGNLVEQLWNFAWPSAIALLH----P-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 150 ~~L~~gq~lS~~G~~i~~fAlpL~v~~lt----~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
.....+++.-.+-..+..++.|.+--... + +....+....+..+..++.+++.|.+.||++||+++..+.++-.+
T Consensus 19 ~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v 98 (502)
T TIGR00887 19 VIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMII 98 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 34455666666666666677776543221 1 334557777888888899999999999999999998766543222
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~ 304 (598)
. + + +....... ......+.+++.-++.|.......+... ....+ ..++ +...++.+..+....+.
T Consensus 99 ~---~--~-~~~~~~~~-~~~~~~~~~~~~r~l~G~~~g~~~~~~~-~~~~e----~~p~---~~Rg~~~~~~~~~~~~g 163 (502)
T TIGR00887 99 A---T--V-ASGLSPGS-SPKSVMATLCFWRFWLGVGIGGDYPLSA-IITSE----FATK---KWRGAMMAAVFAMQGFG 163 (502)
T ss_pred H---H--H-HHHHccCc-ccchHHHHHHHHHHHHHHHHhhhhHHHH-HHHHH----hcCh---hhHHHHHHHHHHHHHHH
Confidence 2 1 1 11111100 0000012334444444544443333332 22233 3443 26678999999888999
Q ss_pred HHhhHHHHHHHHh
Q 007555 305 EIAGASLFGILLS 317 (598)
Q Consensus 305 ~i~GP~lgGlL~s 317 (598)
.++||.+++.+..
T Consensus 164 ~~~g~~~~~~~~~ 176 (502)
T TIGR00887 164 ILAGAIVALIVLA 176 (502)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887654
No 93
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.85 E-value=3.1e-05 Score=83.73 Aligned_cols=332 Identities=16% Similarity=0.180 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHH--cccccceeeccCC-----chHHHHH-HHHHHHHHHHHHHHHHHHHhhh--ccCC-ccchHHHHH
Q 007555 184 VAVMGFFSKLILIV--GGPLVGKLMDHSP-----RIPAYIC-LNTVQAAAQLLSAAMIIHAHTV--IPTS-SSMLLHPWF 252 (598)
Q Consensus 184 ~av~~~~~~Lp~lL--~gp~aGvlvDR~~-----Rr~vmi~-~d~~q~~~v~ls~~~l~~~~~~--~~~~-~~~l~~~l~ 252 (598)
..+.+..-.+|+++ +-++.|...|+++ ||.=.++ -.+.+.....+.... .+.+.. ...+ ..+......
T Consensus 14 A~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a-~~~l~~~~~~~~~~~~~g~~~a 92 (403)
T PF03209_consen 14 AWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFA-LLLLAESGQQSSGPFWLGLALA 92 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHH-HHHHcccccccccccHHHHHHH
Confidence 44445555556544 6889999999999 8874443 333443322221111 121111 0001 121111111
Q ss_pred HHHH-HHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchhHHHHHHHHH
Q 007555 253 FVLV-LAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGL 331 (598)
Q Consensus 253 vv~~-llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~ 331 (598)
..++ +.|..-...+++.. +.-.| ++++ ++..|+-+.+-..-.+..+++..+.|.++.-+++...+.+.-.
T Consensus 93 ~l~F~l~G~G~~~s~T~~l-ALl~D----~~~e---~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~- 163 (403)
T PF03209_consen 93 ALAFLLYGLGVHASGTSFL-ALLAD----LAPE---ERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG- 163 (403)
T ss_pred HHHHHHHHhhHhHhHHHHH-HHHHh----cCCH---hhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH-
Confidence 1122 34444444444443 33345 5554 3777888888888888888898888888877775443332222
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 007555 332 IMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLN 411 (598)
Q Consensus 332 ~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~ 411 (598)
..+....+-...+.++.++ .++..+. .++++ ...++-|+.++++|--+.-+.+..+...
T Consensus 164 --~a~i~~~l~~ia~wg~E~r---~~~~~~~-------~~~~~---------~~f~~a~~~~~~~~~a~~f~~fl~l~t~ 222 (403)
T PF03209_consen 164 --VALIALLLNLIALWGQEPR---RSRRAAA-------AERPR---------PPFREAWRQVWASPQARRFFVFLFLGTL 222 (403)
T ss_pred --HHHHHHHHHHHHHHhcccC---CcccccC-------CCCCC---------ccHHHHHHHHHhCCChhHHHHHHHHHHH
Confidence 2222222221233333111 1111000 00011 1245677888888877765544443332
Q ss_pred hhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHH-HHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 007555 412 VVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYL-VRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS 489 (598)
Q Consensus 412 vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l-~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~ 489 (598)
.+..-+.++=+|.-+ .|++..+---+.+.-+.|.++|-...+++ .+|.+..|+..++......++..-+.....++
T Consensus 223 a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~-- 300 (403)
T PF03209_consen 223 AFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGS-- 300 (403)
T ss_pred HHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhccc--
Confidence 223455677778876 79998877777777777777777666665 44777777665554433222221111111111
Q ss_pred cchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhh
Q 007555 490 QQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAII 552 (598)
Q Consensus 490 ~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~ 552 (598)
...|-.++++.++|.-.|.+...+.+-+.++++.-|-..|.-...|..+- +.....|.+
T Consensus 301 ----~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 301 ----PWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred ----chHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22344455556666778999999999999999999999999888888774 444444443
No 94
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.83 E-value=4.8e-05 Score=85.16 Aligned_cols=164 Identities=10% Similarity=-0.076 Sum_probs=103.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccC-CchHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS-PRIPAYICLNTVQ 222 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~-~Rr~vmi~~d~~q 222 (598)
|++.+..+..-+....++......-+|+|+....+ |....+...........+..+++|.++||+ +|||+++..-+..
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 77888888889999999888888889999988777 887777776666777778888999999999 9999887766543
Q ss_pred HHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHH
Q 007555 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (598)
Q Consensus 223 ~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~ 302 (598)
.+. ..++.. . .. .. ..+++.+.+..+...++.+... ++-.| +.++++ .+..++-+.....-.
T Consensus 87 ~lg----~lll~~--~-~~--~~---~~~~l~l~li~iG~G~~~~~~~-alv~e----lfp~~~-~~R~sgf~i~Y~~~n 148 (493)
T PRK15462 87 AIG----HVVLGA--S-EI--HP---SFLYLSLAIIVCGYGLFKSNVS-CLLGE----LYEPTD-PRRDGGFSLMYAAGN 148 (493)
T ss_pred HHH----HHHHHH--h-hc--ch---hHHHHHHHHHHHhcccccccHH-HHHHH----HCCCCC-ccccceehHHHHHHH
Confidence 222 111111 1 00 00 1122222222222222222111 22233 344321 145566777776667
Q ss_pred HHHHhhHHHHHHHHhhhchhHHHH
Q 007555 303 LCEIAGASLFGILLSKYEPVTCLK 326 (598)
Q Consensus 303 ~~~i~GP~lgGlL~s~~~~~~~l~ 326 (598)
+...+||.++|.+....|...+..
T Consensus 149 lG~~iap~l~g~L~~~~Gw~~~F~ 172 (493)
T PRK15462 149 VGSIIAPIACGYAQEEYSWAMGFG 172 (493)
T ss_pred HHHHHHHHHHHHHHhhhChHHHHH
Confidence 889999999999987767554433
No 95
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.80 E-value=1.4e-05 Score=88.41 Aligned_cols=355 Identities=12% Similarity=0.059 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHcC-ChhH-HHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCc
Q 007555 167 NFAWPSAIALLHP-SLLP-VAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSS 244 (598)
Q Consensus 167 ~fAlpL~v~~lt~-S~l~-~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~ 244 (598)
.|+.| ++....+ |..+ .+...-+-+..+.++..++|.+.||++-|+++..+-++-.+. .++..+..
T Consensus 46 s~a~p-~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~----t~L~~fa~------- 113 (511)
T TIGR00806 46 SFITP-YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCV----WLLLLLGT------- 113 (511)
T ss_pred HHHHH-HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH----HHHHHHHH-------
Confidence 34555 4444667 8888 888888889999999999999999999999888665432222 11112211
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchhHH
Q 007555 245 SMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTC 324 (598)
Q Consensus 245 ~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~~~ 324 (598)
+ ...+.++=+++|..+...- +....+- .|+| + ++..++++..+....+..++||++++.+.+ +|....
T Consensus 114 S--l~~L~i~R~llGvaEA~~~-A~~syI~-~WfP----~---kER~ratsi~~sg~~vG~~Ia~~L~qll~s-~gWr~y 181 (511)
T TIGR00806 114 S--VWHMQLMEVFYSVTMAARI-AYSSYIF-SLVP----P---SRYQRAAAYSRAAVLLGVFLSSVLGQLLVT-LGWISY 181 (511)
T ss_pred H--HHHHHHHHHHHHHHHHHHH-HHHHHHH-HHCC----H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchhH
Confidence 1 2456666677888887776 5555443 3665 2 378999999999999999999999999554 565443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccc-cccccccc-------cccCCCCCCCCCC-CccchhhhHHHHHHHHHHHhc
Q 007555 325 LKFAAGLIMWSLPVMIILTWFTNKISSGV-LDRAKCSQ-------SCCRTSNEGPVPD-ADNIVDVGIEAIKLGWKEYMQ 395 (598)
Q Consensus 325 l~~~~~~~~~S~~~~~l~~~li~rv~~~~-l~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~i~eG~~~~~~ 395 (598)
.-++.+ .+.+....++..+++.+..+.. .++.++.+ +...+..+++..+ .+....+.++.+...++.-++
T Consensus 182 ~~Ln~I-sl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ 260 (511)
T TIGR00806 182 STLNII-SLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYR 260 (511)
T ss_pred HHHHHH-HHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhc
Confidence 333311 1122221221112222110000 00111000 0000000000000 011122445566666666667
Q ss_pred CCc-hHHHHHHHHHHHHhhhhhhHHHHHHHHh--cCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 007555 396 QPV-LPASLAYVLLCLNVVLTPGSLMTAFLTQ--RGL---NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (598)
Q Consensus 396 ~pv-ll~~l~~~lL~~~vll~f~~l~~~yl~~--lg~---s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l 469 (598)
+|. ++.++-.++... ...+.+.|... ..+ .+..=|.+.++.-+.|-++++.++.+..+. .+.+.+.+
T Consensus 261 n~~vl~WSlWwa~a~~-----g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w--~~~~~l~l 333 (511)
T TIGR00806 261 NPQLLLWSLWWVFNSA-----GYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRW--ARWSKLLI 333 (511)
T ss_pred CcchhhhhHHHHHHhh-----HHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCc--hhhHHHHH
Confidence 765 455665543211 11233334331 122 223567888888888888888888875444 33332222
Q ss_pred HHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhh-hhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHH
Q 007555 470 IFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSY-DIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVML 547 (598)
Q Consensus 470 ~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~f-dl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~ 547 (598)
.. ..++.+..+++.+... .+++.-.+-++.+. ...| ....+..+=+...+|.-|-|+|+-+.++.+.. ++..
T Consensus 334 ~v--~s~~~~gll~~m~~t~---~Iw~~Y~~yvlf~~-~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~ 407 (511)
T TIGR00806 334 AV--VSAIQAGLVFWMSQSH---DIWVLYVTYVLFRG-IYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITA 407 (511)
T ss_pred HH--HHHHHHHHhhhhhccc---chHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence 11 1122222233222111 12222223333332 2223 22334455566788888999999988887773 4443
Q ss_pred Hh----hhhccCcchh
Q 007555 548 GV----AIIANDVSHF 559 (598)
Q Consensus 548 ~~----~i~~~~~~~f 559 (598)
++ ++-.+...||
T Consensus 408 iVvd~~gl~l~i~~Qf 423 (511)
T TIGR00806 408 VVSDKRGLGLQVRKQF 423 (511)
T ss_pred EEEcccccCCCceeEE
Confidence 33 2323444555
No 96
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.79 E-value=4.2e-08 Score=106.48 Aligned_cols=358 Identities=11% Similarity=-0.011 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---cC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 150 YALYACCLAGNLVEQLWNFAWPSAIALL---HP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 150 ~~L~~gq~lS~~G~~i~~fAlpL~v~~l---t~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
.+..+=-.+.++=+++-++++|-....+ ++ +...-++.+.+..+.+.+++|+.|.++||+|||++|..+..+=.++
T Consensus 32 ~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~A 111 (493)
T KOG1330|consen 32 TLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLA 111 (493)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHH
Confidence 3334444566777889999998765443 45 8888899999999999999999999999999999998776543333
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~ 305 (598)
+.++... -..|.+.+.=.+.|+-+..+.++.+.-| .| ..+++ +-.+.=++..-.--+..
T Consensus 112 v~~~~fs-------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~I-aD----~f~~~---~Rs~~~~ify~~ipvGs 170 (493)
T KOG1330|consen 112 VFASGFS-------------NHFWQVLLCRGFVGIGEASYSPIAPSLI-AD----SFPDD---KRSRVLGIFYFAIPVGS 170 (493)
T ss_pred HHHHHHH-------------HHHHHHHHHHHHhccchhhhcccchhHh-hh----cCcch---hhhHHHHHhhhhccccc
Confidence 2222111 0123334444467777888888776544 45 44432 44444444443222223
Q ss_pred HhhHHHHHHHHhhhc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHH
Q 007555 306 IAGASLFGILLSKYE-PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (598)
Q Consensus 306 i~GP~lgGlL~s~~~-~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (598)
.+|=+.|+.+-+..+ ...+.+....+. ++..++ .+++ .++++|+..+ +..++ .. . .+...+.|+
T Consensus 171 glG~vvgs~va~~~~~Wr~af~~~avl~---vi~~~L-~~~f----~~eP~rga~~-~~~~~---~~--~-~~~~ts~~k 235 (493)
T KOG1330|consen 171 GLGYVVGSVVASLTFWWRWAFRGSAVLG---VIVGLL-VFLF----VREPERGARD-EVDGE---NK--M-VKPFTSVWK 235 (493)
T ss_pred ceeEEeeeeeccCccceEEEEEeehHHH---HHHHHH-HHhh----ccCccccccc-ccccC---Cc--C-CCCccchHH
Confidence 333333333333222 222333332222 211111 1111 2223321111 00000 00 0 001134555
Q ss_pred HHHHHHHHHhcCCchH-HHHHHHHHHHHhhhh--hhH-HHHHHHHh-cC----CChhHHHHHHHHHHHHHHHHHHHHHHH
Q 007555 385 AIKLGWKEYMQQPVLP-ASLAYVLLCLNVVLT--PGS-LMTAFLTQ-RG----LNPSIIGGFSGLCASMGVAATFLSAYL 455 (598)
Q Consensus 385 ~i~eG~~~~~~~pvll-~~l~~~lL~~~vll~--f~~-l~~~yl~~-lg----~s~~~iG~~~g~gavgGLlGtl~~~~l 455 (598)
|+ +...+.|++- .++.+....+-. .+ +.+ ....|..+ .| .+.-.-|+.-++|.+|.+.|+.+..++
T Consensus 236 Dl----~~l~~~~v~v~~sl~~~a~~fv~-Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 236 DL----KVLAKIKVFVLSSLGIIAAQFVI-GSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred HH----HHHHccCceeeehHHHHHHHHhc-cccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHH
Confidence 54 4455655543 244444333322 22 222 22223333 23 233334455566666667777777776
Q ss_pred HHhhhhhHHHHHHHHHHHHHHH---HHH--HHHhhccc--ccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccc
Q 007555 456 VRRLGILKAGAAGLIFQASLLA---MAV--AVYWSGSL--SQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKA 528 (598)
Q Consensus 456 ~rrlg~~r~g~~~l~~q~~~L~---~~v--~~~~~g~~--~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~r 528 (598)
.+.+....... ..|..+.. .++ ...++... +....+.+++.+...+- ..|. +..-+.-+.||++.|
T Consensus 311 ~~~~~~~~~~~---~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~-~~~a---~n~~i~l~vV~p~~R 383 (493)
T KOG1330|consen 311 SRIFPNSGTLR---ASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISW-FNWA---TNNPIFLEVVPPSRR 383 (493)
T ss_pred HHhcccccchh---HHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHh-cccc---cccceeeEecCcccc
Confidence 66443211111 11111110 011 11111111 00111222222332221 1232 334566778899999
Q ss_pred hhHHHHHHHHHHHHH--HHHHHhhhhccC
Q 007555 529 NLIGTTEISVASLVE--SVMLGVAIIAND 555 (598)
Q Consensus 529 GRV~sv~~sl~~~~~--ll~~~~~i~~~~ 555 (598)
-.+.+.+..+...+- ..++++|++-..
T Consensus 384 t~a~a~~~~~~h~fgd~~~p~ivGilsd~ 412 (493)
T KOG1330|consen 384 TTAYALDTVFEHIFGDAASPYIVGILSDK 412 (493)
T ss_pred cHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence 999999999999882 444566655443
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.75 E-value=0.00019 Score=80.05 Aligned_cols=131 Identities=15% Similarity=0.072 Sum_probs=75.8
Q ss_pred HHcC-ChhHHHHHHHHHHHHHHHcccccceeec----cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh----ccC-Ccc
Q 007555 176 LLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMD----HSPRIPAYICLNTVQAAAQLLSAAMIIHAHTV----IPT-SSS 245 (598)
Q Consensus 176 ~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvD----R~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~----~~~-~~~ 245 (598)
+..+ +...++....+..+-.++..|++|.+.| |++|||.++..-.. ..+++..++.+.... ... +..
T Consensus 32 ~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~---~~~~~l~ll~~~~~~~~~~~~~~~~~ 108 (477)
T TIGR01301 32 QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA---LVAFAVILIGFAADIGHLFGDNLDKK 108 (477)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH---HHHHHHHHHHhCchhhhhcccccccc
Confidence 4455 8899999999999999999999999999 59999987754221 111111111121000 000 000
Q ss_pred chHHH--HHHHH-HHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 007555 246 MLLHP--WFFVL-VLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGIL 315 (598)
Q Consensus 246 ~l~~~--l~vv~-~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL 315 (598)
...+. ++++. .+.......+.... |.+++-+++++ +++...+|++.+....+..++|+.+||.+
T Consensus 109 ~~~~~i~~~~i~~~lld~~~n~~~~p~-----rALiaDl~p~~-~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 109 TKPRAIIVFVVGFWILDVANNMLQGPC-----RAFLADLTGGD-ARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH-----HHhcccccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011 11111 11222222222222 23344477653 22456899999999999999999999986
No 98
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.71 E-value=1.3e-06 Score=100.83 Aligned_cols=289 Identities=11% Similarity=-0.010 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHH
Q 007555 155 CCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI 233 (598)
Q Consensus 155 gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l 233 (598)
..+.+.+.......+++-+- ..++ +....|+...+..+..++..+++|.+.||++|||++...-++-.+. +.+.
T Consensus 41 ~~~~~~~~~g~~~~~l~~ie-k~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg----~ll~ 115 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIE-RRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLG----SFLL 115 (633)
T ss_pred HHHHHHHHHHHHHhhchhhh-hhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHH----HHHH
Confidence 45555555556666665443 3345 7777888888889999999999999999999999887665432222 1111
Q ss_pred HHHhhh-cc---C-------C-----------------------------c--cchHHHHHHHHHHHHHHHHHHhhhhhh
Q 007555 234 IHAHTV-IP---T-------S-----------------------------S--SMLLHPWFFVLVLAGAVERLTGVALGV 271 (598)
Q Consensus 234 ~~~~~~-~~---~-------~-----------------------------~--~~l~~~l~vv~~llg~i~~l~~~a~~~ 271 (598)
...+.. ++ . + . ...+..+++.-++.|..+....+....
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 111100 00 0 0 0 101112233344555444444333332
Q ss_pred hccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhc-h---------------h-HH-HHHHHHHH-
Q 007555 272 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-P---------------V-TC-LKFAAGLI- 332 (598)
Q Consensus 272 aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~-~---------------~-~~-l~~~~~~~- 332 (598)
.-.||+ +++ +..++.+.......+...+||+++|.+...+. . . .+ -+..+.+.
T Consensus 196 -~i~d~~----~~~---~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g 267 (633)
T TIGR00805 196 -YIDDFA----KSK---NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICG 267 (633)
T ss_pred -hhhccC----Ccc---ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence 234543 332 67788899998888899999999999886431 0 0 00 01111111
Q ss_pred HHHHHHHHHHHHHHHhhcccccccc-cccc-cccCCCCCCCCCCC-ccchhhhHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 007555 333 MWSLPVMIILTWFTNKISSGVLDRA-KCSQ-SCCRTSNEGPVPDA-DNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC 409 (598)
Q Consensus 333 ~~S~~~~~l~~~li~rv~~~~l~~~-~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~ 409 (598)
+..++..+ .+..+. +.++++ +..+ +..++......++. +.......++....++.++++|.+........+.
T Consensus 268 ~l~~l~~v----~l~~~p-~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~ 342 (633)
T TIGR00805 268 GVALLTSI----PFFFFP-KALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVID 342 (633)
T ss_pred HHHHHHHH----HHHhCc-cccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 11111111 111111 111110 0000 00000000000000 0000112345666788899999887765554444
Q ss_pred HHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHH-HHHHHHHHHHHHHHhhhh
Q 007555 410 LNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCAS-MGVAATFLSAYLVRRLGI 461 (598)
Q Consensus 410 ~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gav-gGLlGtl~~~~l~rrlg~ 461 (598)
+..+..+...++.|+. +.|+++...|++.+...+ ++++|.++.+++.+|++.
T Consensus 343 ~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~ 396 (633)
T TIGR00805 343 SLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKL 396 (633)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecc
Confidence 4333456667777887 479999999999988776 568899999999998884
No 99
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.70 E-value=0.00014 Score=78.40 Aligned_cols=271 Identities=16% Similarity=0.120 Sum_probs=153.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007555 157 LAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHA 236 (598)
Q Consensus 157 ~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~ 236 (598)
++--+.+.+.+.=+|-+.-..+=|..+.++..++....+.+.+.++|.+++|+.+|+-++..-.+-+ +-|.+ ++.
T Consensus 23 fl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~a----vg~~l-F~p 97 (422)
T COG0738 23 FLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYA----VGAAL-FWP 97 (422)
T ss_pred HHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHH----HHHHH-Hhh
Confidence 3333445555555666555544599999999999999999999999999999999998876654322 22222 331
Q ss_pred hhhccCCccchHHHHHHH-HHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 007555 237 HTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGIL 315 (598)
Q Consensus 237 ~~~~~~~~~~l~~~l~vv-~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL 315 (598)
.... . .+..+++ ++++++--.+-+++..+- +-.+-+++ .=++--..+|.-+.+..++||.+++.+
T Consensus 98 Aa~~---~---~y~~FL~~lFila~Gi~~LetaaNp~-----v~~lg~~~---~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 98 AASS---K---SYGFFLVALFILASGIGLLETAANPY-----VTLLGKPE---SAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred hhhh---h---hHHHHHHHHHHHHhhhHHHHhccchH-----HHHhCCch---hHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 1110 1 1233322 233333323333333332 22243321 122222356667788899999999998
Q ss_pred Hhh-----hchhHHHHHH-HHHHHHH--HH----HHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhH
Q 007555 316 LSK-----YEPVTCLKFA-AGLIMWS--LP----VMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (598)
Q Consensus 316 ~s~-----~~~~~~l~~~-~~~~~~S--~~----~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (598)
+-. .++. ...+ -..++.+ .+ ..++..+.+.....+.++.++.. ++..+ .++
T Consensus 164 ils~~~~~~~~~--~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~------------~~~~~-~~~-- 226 (422)
T COG0738 164 ILSGVALTMSAA--QILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAA------------PSLGA-SGS-- 226 (422)
T ss_pred HHhhhhhccCHH--HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccc------------ccccc-ccc--
Confidence 762 1111 0000 0101111 10 00000011111111111111100 00000 000
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007555 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (598)
Q Consensus 384 ~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~ 462 (598)
.+..+.+|||.++.......+|.-+=-..++.++.|+.+ .|+++.+-....+..-++-.+|-++..++.+|++..
T Consensus 227 ----~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~ 302 (422)
T COG0738 227 ----AGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE 302 (422)
T ss_pred ----chHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 156778999999887777777743312567788889887 899998888888888888889999999999999998
Q ss_pred HHHHH
Q 007555 463 KAGAA 467 (598)
Q Consensus 463 r~g~~ 467 (598)
|....
T Consensus 303 k~Laf 307 (422)
T COG0738 303 KYLAF 307 (422)
T ss_pred HHHHH
Confidence 87654
No 100
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.70 E-value=6.1e-06 Score=89.16 Aligned_cols=172 Identities=16% Similarity=0.119 Sum_probs=110.8
Q ss_pred hhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007555 379 VDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVR 457 (598)
Q Consensus 379 ~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~r 457 (598)
..+-++++++-+++.++|+-+..=+..-++|.-.+...-+....|.. ..|++..++.++.....+.+++|++++|+|.+
T Consensus 234 l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~ 313 (438)
T COG2270 234 LRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDE 313 (438)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667888888899998886554222222221111122345666887 58999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHH
Q 007555 458 RLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEIS 537 (598)
Q Consensus 458 rlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~s 537 (598)
|+|..+....++.+ ....++..+.... ...+++.. ..++...| ...-...++.=+.+|+++-||.+|..+.
T Consensus 314 rfg~k~vl~~~lvi---~~~~~~~~~~~~~---~~~f~i~g-ll~g~s~G--~~qA~SRSy~~~lvp~~k~~~fFglyal 384 (438)
T COG2270 314 RFGSKPVLMIGLVI---LSIAALYLIFLEG---ELDFWILG-LLVGTSLG--GAQASSRSYLARLVPKGKEGRFFGLYAL 384 (438)
T ss_pred HhCCceeehHHHHH---HHHHHHHHHHccc---cHHHHHHH-HHHHHhcc--hHHHHHHHHHHHhCCCccccceeehhhh
Confidence 99987665554432 1122222222221 11222221 12212222 2345677899999999999999999998
Q ss_pred HHHHHH-HHHHHhhhhccCcchh
Q 007555 538 VASLVE-SVMLGVAIIANDVSHF 559 (598)
Q Consensus 538 l~~~~~-ll~~~~~i~~~~~~~f 559 (598)
...... +.++.++++-....+.
T Consensus 385 tgra~S~~gp~lv~v~t~iTg~~ 407 (438)
T COG2270 385 TGRAASFLGPFLVAVITQITGSS 407 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHhcch
Confidence 888886 5556667666555553
No 101
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.50 E-value=0.00016 Score=80.42 Aligned_cols=149 Identities=17% Similarity=0.167 Sum_probs=88.9
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHH------HHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007555 389 GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTA------FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (598)
Q Consensus 389 G~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~------yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~ 462 (598)
.++.++++|.+|..+...+..... ..+.+.... .+++.|+++..--++....++..++.+++++++.+|+|..
T Consensus 257 sl~~~~~~~~lR~~~~i~~~v~~~-qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR 335 (485)
T KOG0569|consen 257 SLRQLLKNPTLRRPLLIGIVVSFA-QQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR 335 (485)
T ss_pred cHHHHhcCcchhHHHHHHHHHHHH-HHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 477889999888864443322211 223332211 3346799998888888888888899999999999999976
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHhhcccccchhHHHHHHH----HHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHH
Q 007555 463 KAGAAGLIFQASL-LAMAVAVYWSGSLSQQNPLLFFLCL----IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEIS 537 (598)
Q Consensus 463 r~g~~~l~~q~~~-L~~~v~~~~~g~~~~~~~~~~~~~~----i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~s 537 (598)
...+.+......+ +.+.+..+...... .+..+..++. ++...+| ..-.-.-+..|.+|++.|..++++..+
T Consensus 336 pLll~~~~~~~~~~~~~~~~~~l~~~~~-~~~~y~~i~~~~~~~~~f~~G---~gpi~~fi~aELf~~~~R~aa~s~~~~ 411 (485)
T KOG0569|consen 336 PLLLISLSLMAVALLLMSIALFLSNSFG-SWLSYLCIAAIFLFIISFAIG---PGPIPWFIGAELFPQSARSAAQSVATA 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhhcC---CCchhHHHHHHhCCccchHHHHHHHHH
Confidence 6665544332222 22222222211110 1111111111 1111222 123445678999999999999999999
Q ss_pred HHHHH
Q 007555 538 VASLV 542 (598)
Q Consensus 538 l~~~~ 542 (598)
.+++.
T Consensus 412 ~~w~~ 416 (485)
T KOG0569|consen 412 VNWLS 416 (485)
T ss_pred HHHHH
Confidence 99888
No 102
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.40 E-value=0.00023 Score=74.84 Aligned_cols=153 Identities=11% Similarity=0.015 Sum_probs=83.7
Q ss_pred HhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh---cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 007555 393 YMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (598)
Q Consensus 393 ~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~---lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l 469 (598)
.+++|.+.......++|.-.-.....-++.|+.+ .|+++.+.+...+....+..+|.++.+++.+|+|..|...++.
T Consensus 136 ~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~ 215 (310)
T TIGR01272 136 AFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNA 215 (310)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 3455555443333333432212455667788874 4899999999999999999999999999999999877665443
Q ss_pred HHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHH-HHHHHHH
Q 007555 470 IFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLG 548 (598)
Q Consensus 470 ~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~-~~ll~~~ 548 (598)
..... +...++... .....+.+ .+..++....--...+..++..|++ .|+..++.. +... .-..+.+
T Consensus 216 ~l~~~----~~~l~~~~~--~~~~~~~~----~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~~-~~~~Gg~i~P~l 283 (310)
T TIGR01272 216 FLAVL----LSIGAALTH--GYVAMWFV----LALGLFNSIMFPTIFSLALNALGRH-TSQGSGILC-LAIVGGAIVPLL 283 (310)
T ss_pred HHHHH----HHHHHHHcC--CHHHHHHH----HHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHHH-HHHhcchHHHHH
Confidence 32211 111111111 01111111 1112222222233345566666653 566666643 3332 2356666
Q ss_pred hhhhccCcc
Q 007555 549 VAIIANDVS 557 (598)
Q Consensus 549 ~~i~~~~~~ 557 (598)
+|.+.+..+
T Consensus 284 ~G~lad~~g 292 (310)
T TIGR01272 284 QGSLADCLG 292 (310)
T ss_pred HHHHHHhcc
Confidence 776665433
No 103
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.39 E-value=1.7e-05 Score=85.01 Aligned_cols=322 Identities=13% Similarity=0.017 Sum_probs=166.4
Q ss_pred ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHH
Q 007555 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAG 259 (598)
Q Consensus 180 S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg 259 (598)
+-..+|+.-.+-.+-+++.+|+.|.+.||..+|--|+.--++- ..+.++ +++. ++ ++.++++=.+-|
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vm----f~sTil--Fafg-----~s--y~~l~vAR~LQg 170 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVM----FLSTIL--FAFG-----NS--YPMLFVARSLQG 170 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHH----HHHHHH--HHHc-----ch--hHHHHHHHHHhh
Confidence 3445666666777788999999999999999998877554322 233333 2211 11 244555544555
Q ss_pred HHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchh-HHHHHHHHHHHHHHHH
Q 007555 260 AVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPV-TCLKFAAGLIMWSLPV 338 (598)
Q Consensus 260 ~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~-~~l~~~~~~~~~S~~~ 338 (598)
.-+.+++++.. ++-.| ..++| .+..++-+....--+...++||++||++|.+.|-. +++... ++.+...+.
T Consensus 171 vgsA~~~tsgl-amlAd----~f~~d--~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~-~v~Lld~~L 242 (464)
T KOG3764|consen 171 VGSAFADTSGL-AMLAD----VFPED--NERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLA-IVLLLDGAL 242 (464)
T ss_pred hhHHHHHhhhH-HHHHH----Hcccc--hhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHH-HHHHHHHHH
Confidence 55555555443 33344 44543 24567777777777888999999999999998843 333322 111122111
Q ss_pred HHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchH-HHHHHHHHHHHhhhhhh
Q 007555 339 MIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLP-ASLAYVLLCLNVVLTPG 417 (598)
Q Consensus 339 ~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll-~~l~~~lL~~~vll~f~ 417 (598)
. +++. +| . +.+++ +.++. . ++..+.++|... ...+....+... ...+
T Consensus 243 ~----l~vi---~p--~--~~~~~--------~~~~~----~--------~~~~Ll~dP~I~~~agai~~~n~~l-afLe 290 (464)
T KOG3764|consen 243 Q----LLVI---EP--T--EMDPD--------STEQG----T--------PMWSLLMDPYILLIAGAITFSNSSL-AFLE 290 (464)
T ss_pred H----Hhee---Cc--c--ccCcc--------ccccC----c--------cHHHHHhCchHhhhhcchhhccchH-HHhC
Confidence 1 1111 11 1 11100 00010 0 133355666543 233333333332 2334
Q ss_pred HHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH---hhcccccchh
Q 007555 418 SLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVY---WSGSLSQQNP 493 (598)
Q Consensus 418 ~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~---~~g~~~~~~~ 493 (598)
.....+-.+ ...+.-++|+..=-..+.-.+|+-+++.+++|++..|... .++ .++..++... ..++ ...
T Consensus 291 Ptlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~---~~~-gl~~~G~~~~~iP~~~~---~~~ 363 (464)
T KOG3764|consen 291 PTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLL---SLG-GLATVGVSSGPIPFATS---IAQ 363 (464)
T ss_pred cccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHH---HHH-HHHHHHHHhchhHhhhh---HHH
Confidence 444444443 4533338888887788888999999999999999777332 111 1112222211 1111 111
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccch--hHHHHHHHHHHHHHHHHHHh--hhhccCcchhHHHHH
Q 007555 494 LLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKAN--LIGTTEISVASLVESVMLGV--AIIANDVSHFGFLAT 564 (598)
Q Consensus 494 ~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rG--RV~sv~~sl~~~~~ll~~~~--~i~~~~~~~f~~l~l 564 (598)
+++-. ...+++.-..|....-.+|..++..+-. -|-|...+++...-.+++.+ ++.+...+.+++.+.
T Consensus 364 L~vp~---~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl 435 (464)
T KOG3764|consen 364 LWVPN---FGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWL 435 (464)
T ss_pred Hhhhh---HHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHH
Confidence 22111 1222333456888888888888765432 02222233333333334443 344445555555543
No 104
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.37 E-value=1.8e-05 Score=85.70 Aligned_cols=162 Identities=9% Similarity=-0.057 Sum_probs=98.1
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 007555 388 LGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA 467 (598)
Q Consensus 388 eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~ 467 (598)
..++..+++|.++..+....+++..........+.+..+.+.++.+.|++.+...++.++++...+++.+|+|..+....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL 87 (417)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence 45666778888877555544443321223334444666778899999999999999999999999999999998765543
Q ss_pred HHHHHHHHH-HHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHH-
Q 007555 468 GLIFQASLL-AMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV- 545 (598)
Q Consensus 468 ~l~~q~~~L-~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll- 545 (598)
+........ ..+...+. ... ....+....++.+++...+..+.+.++++.+|+++|+|.++...+..++...+
T Consensus 88 ~~~~~~~~~~~~~~~~~~-~~~----~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 162 (417)
T PRK10489 88 ARGTCGLGFIGLALNAFL-PEP----SLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVIS 162 (417)
T ss_pred hHHHHHHHHHHHHHHHHc-CCC----cHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhH
Confidence 322211111 11111111 111 11112222222233333445677889999999999999999988776666533
Q ss_pred HHHhhhhcc
Q 007555 546 MLGVAIIAN 554 (598)
Q Consensus 546 ~~~~~i~~~ 554 (598)
+.+.+.+..
T Consensus 163 ~~l~g~l~~ 171 (417)
T PRK10489 163 PALGGLLIA 171 (417)
T ss_pred HHHHHHHHH
Confidence 344454443
No 105
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.32 E-value=0.00016 Score=79.83 Aligned_cols=380 Identities=18% Similarity=0.147 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCC-----chHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007555 164 QLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSP-----RIPAYICLNTVQAAAQLLSAAMIIHAH 237 (598)
Q Consensus 164 ~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~-----Rr~vmi~~d~~q~~~v~ls~~~l~~~~ 237 (598)
++...+..-++-+-.+ |+...+.+.....+|+.+ -|+.|.+.|.++ ||.-|+.+-++..+. +. .+..
T Consensus 6 ~l~~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~----~~--~~~~ 78 (433)
T PF03092_consen 6 GLSRLAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVS----AL--VLAL 78 (433)
T ss_pred hhHHHHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHH----HH--HHHh
Confidence 3455566666777778 999999999999999954 999999999996 555555444432211 11 1111
Q ss_pred hhccCCccchHHHHHHHHHHHHHHHHHHhhhhhh-hccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q 007555 238 TVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV-AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILL 316 (598)
Q Consensus 238 ~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~-aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~ 316 (598)
.+....+ .....+.+++......+++++... .+| ...++ ++.-.+..+.......+..++|-.++|.+.
T Consensus 79 -~~~~~~s--~~~~~~~l~la~~g~a~~DV~aDa~vvE------~~~~~-p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~ 148 (433)
T PF03092_consen 79 -LPASESS--AAIAVVLLFLASFGYAFADVAADALVVE------LARRE-PESRGDLQSFVWGVRSVGSLVGSLLSGPLL 148 (433)
T ss_pred -cccccch--hhhHHHHHHHHHHHHHHHHHhhhHHHHH------HhhcC-CchhHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 1110111 112222223333334455554432 222 23332 223334456666667778888888899988
Q ss_pred hhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcC
Q 007555 317 SKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQ 396 (598)
Q Consensus 317 s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~ 396 (598)
...++...+.+.........+.. +.+. ++ ++.++..+.. .. .+ ++.........+.+++-|+ .+++
T Consensus 149 ~~~~~~~~f~i~~~~~~l~~~~~----~~~~----~e-~~~~~~~~~~-~~--~~-~~~~~~~~~~~~~~~~l~~-~~~~ 214 (433)
T PF03092_consen 149 DSFGPQGVFLISAALPLLMLIVA----LFLL----EE-RKVRPADEVF-SF--GK-EEVPCLFGSFREQLSELWR-ALQQ 214 (433)
T ss_pred hcCCCeEEehHHHHHHHHHHHHH----HHhh----hh-ccccccchhh-cc--cc-cccchhhHHHHHHHHHHHH-HHhh
Confidence 87776543333221111111111 1111 11 0001000000 00 00 0000111123344455555 4444
Q ss_pred C-chHHHHHHHHHHHHhhhhhhHHHHHHH-H-hcC---CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 007555 397 P-VLPASLAYVLLCLNVVLTPGSLMTAFL-T-QRG---LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 470 (598)
Q Consensus 397 p-vll~~l~~~lL~~~vll~f~~l~~~yl-~-~lg---~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~ 470 (598)
| ++.+.+.+..+ ++.....+.-...|. . ..+ +++..+|....++++++++|.+++.+.-++.+..+...+...
T Consensus 215 ~~i~~~~~~~~~~-~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~ 293 (433)
T PF03092_consen 215 RAIWQPILFFIFF-FNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTL 293 (433)
T ss_pred hHHHHHHHHHHHH-HHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 5 44443311111 111011111101122 2 256 999999999999999999999999998888876555443221
Q ss_pred HHHHHHHHHHHHH-h-------hcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH
Q 007555 471 FQASLLAMAVAVY-W-------SGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 542 (598)
Q Consensus 471 ~q~~~L~~~v~~~-~-------~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~ 542 (598)
. .....+... . .|.+ +. .+.+...++..-.+- +--++...+.=|.+|+..=|.++|+..++.++.
T Consensus 294 ~---~~~~~l~~~~lv~~~n~~~Gi~-d~--~f~lgd~~l~~~~~~-i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg 366 (433)
T PF03092_consen 294 V---SVLASLFDLLLVTRWNLDLGIP-DQ--WFALGDTILEEVIGM-IAFMPSLVLAARLCPKGSEGTVYALLASFSNLG 366 (433)
T ss_pred H---HHHHhcccEEEEEEEeeeeCcC-Ce--EEEEEhHHHHHHHHH-HHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHH
Confidence 1 111111100 0 0111 11 000000111111111 123566777889999999999999999999998
Q ss_pred HHHHHHhh-----hhc---cCcchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 007555 543 ESVMLGVA-----IIA---NDVSHFGFLATLSLLSVVGAAWMFCHWLLN 583 (598)
Q Consensus 543 ~ll~~~~~-----i~~---~~~~~f~~l~l~S~~~V~~a~~l~~~~l~~ 583 (598)
.+.+..+| .+. .+.++.++++++....-+. .+.+..++.+
T Consensus 367 ~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll-~l~ll~lLp~ 414 (433)
T PF03092_consen 367 SSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLL-PLPLLFLLPP 414 (433)
T ss_pred HHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHH-HHHHHHHcCC
Confidence 64443332 222 2344456666665555533 3444555544
No 106
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.31 E-value=0.0026 Score=68.05 Aligned_cols=353 Identities=17% Similarity=0.135 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHH---HcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 150 YALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILI---VGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 150 ~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~l---L~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
..+..+=.+-.++=|----+++-++-++.+ .-+..+..++.+++|.+ +++|++..+.-|+.-.|.+..+-++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Lll---- 86 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLL---- 86 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHH----
Confidence 455566666666666666666655555544 44456666777777764 5778889898888877766554432
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~ 305 (598)
+..+.++- .. . ..+.+|.-.++.|+.-.+.++-... ++++|-|.+...+.+.....-.++.
T Consensus 87 --i~~G~~iR---~~---~--~~~~L~~gt~l~G~gIav~nVLLPs---------lIK~~Fpk~~~~mtglYs~sl~~~a 147 (395)
T COG2807 87 --IAAGILIR---SL---G--GLPLLFLGTLLAGAGIAVINVLLPS---------LIKRDFPKRVGLMTGLYSTSLGAGA 147 (395)
T ss_pred --HHHHHHHH---hc---c--cHHHHHHHHHHHHhhHHHHHHhhhH---------HHHhhcccchhhHHhHHHHHHHHHH
Confidence 11112111 10 0 0234555555555544444443333 3333223345444454444444444
Q ss_pred HhhHHHHHHHHhhh-chhHHHHHHHHHHHHHHHHHH-HHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhH
Q 007555 306 IAGASLFGILLSKY-EPVTCLKFAAGLIMWSLPVMI-ILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (598)
Q Consensus 306 i~GP~lgGlL~s~~-~~~~~l~~~~~~~~~S~~~~~-l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (598)
-+|+.+.--+-... |...++. .|..+... +..|+ |...|++....+ .+ . +++
T Consensus 148 aLaa~lavpla~~~~gW~~aL~------~WAl~allAl~~Wl------Pq~~r~~~~~~~------~~--~----~~~-- 201 (395)
T COG2807 148 ALAAALAVPLAQHSGGWRGALG------FWALLALLALLIWL------PQALREQAASIA------TK--L----VSV-- 201 (395)
T ss_pred HHHhhhhhHHHHhhccHHHHHH------HHHHHHHHHHHHHh------hhcccccccccc------cc--c----ccc--
Confidence 55555555554443 2222222 22222111 11122 211111100000 00 0 000
Q ss_pred HHHHHHHHHHhcCCchHHHHHH----HHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007555 384 EAIKLGWKEYMQQPVLPASLAY----VLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (598)
Q Consensus 384 ~~i~eG~~~~~~~pvll~~l~~----~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrl 459 (598)
+-+||+|.-.....+ +.+|+.+ -+-++.++.++|+|+.+-|...+...+.++..++..|.+.+|.
T Consensus 202 -------~~vw~~~~aW~vtLfmGlqS~~~Y~~----~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~ 270 (395)
T COG2807 202 -------RKVWRSPLAWQVTLFMGLQSLLYYIV----IGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRS 270 (395)
T ss_pred -------cccccCchhHHHHHHHHhhHHHHHHH----HHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 126777743333333 2233332 2456778889999999999999999999999999999999886
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH--HHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHH
Q 007555 460 GILKAGAAGLIFQASLLAMAVA--VYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEIS 537 (598)
Q Consensus 460 g~~r~g~~~l~~q~~~L~~~v~--~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~s 537 (598)
+-.|-...... .+...+.. .+++.+. ...++++.|+. . --.|-+..+-+.++..+++.-++-+|....
T Consensus 271 ~n~r~~~~~~~---~~~l~G~~G~~~~P~~~---~~lw~~llG~G---~-G~~F~laL~li~~rs~~a~~Aa~LSgmaQg 340 (395)
T COG2807 271 KNQRPLVVLAL---LLMLVGLVGLLLAPGQL---PILWALLLGLG---Q-GGAFPLALTLILLRSSDAAIAAALSGMAQG 340 (395)
T ss_pred cccchHHHHHH---HHHHHHHHHHHHhhhhH---HHHHHHHHhCc---c-chHHHHHHHHHHhhcCChHHHHHHHHHhhh
Confidence 65444332211 11122222 2343321 12222322221 1 235777888889999999999999999999
Q ss_pred HHHHHH-HHHHHhhhhccCcchhHHHHHHHHHHHHH
Q 007555 538 VASLVE-SVMLGVAIIANDVSHFGFLATLSLLSVVG 572 (598)
Q Consensus 538 l~~~~~-ll~~~~~i~~~~~~~f~~l~l~S~~~V~~ 572 (598)
+.++.- .+++.+|.+.+....|....+.-+.....
T Consensus 341 ~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~ 376 (395)
T COG2807 341 VGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLL 376 (395)
T ss_pred hhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHH
Confidence 998884 88899999988888887765544444333
No 107
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.29 E-value=0.0007 Score=75.44 Aligned_cols=356 Identities=15% Similarity=0.092 Sum_probs=191.9
Q ss_pred hhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHH
Q 007555 181 LLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGA 260 (598)
Q Consensus 181 ~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~ 260 (598)
..+-+..--+...-+++-.-++|.++||++-|+++..+-++..++ ..+..++...+ .+.+.++=++.|.
T Consensus 72 ~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~----t~l~P~aa~~~-------~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 72 STEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALL----TLLTPLAASIG-------FYLLLVLRFLQGL 140 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHH----HHHHHHHHHhc-------chhhHHHHHHhHH
Confidence 333444444555666777778999999999999988776554333 12222221211 1334444456666
Q ss_pred HHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhh-hchhHH-HHHHHHHHHHHHHH
Q 007555 261 VERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-YEPVTC-LKFAAGLIMWSLPV 338 (598)
Q Consensus 261 i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~-~~~~~~-l~~~~~~~~~S~~~ 338 (598)
.+...-++... +...|.|. .+-.+.=+.+..-.+++.+++=+++|.|-+. +|.... ........++..
T Consensus 141 ~~g~~~pa~~~-i~~~W~P~-------~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~-- 210 (466)
T KOG2532|consen 141 GQGVLFPAIGS-ILAKWAPP-------NERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFI-- 210 (466)
T ss_pred HHhHHHhhhhc-eeeeECCH-------HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHH--
Confidence 66555555543 34458774 1456777777777788888888889998887 775432 222211111111
Q ss_pred HHHHHHHHHhhcccccccccccccc----cCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 007555 339 MIILTWFTNKISSGVLDRAKCSQSC----CRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVL 414 (598)
Q Consensus 339 ~~l~~~li~rv~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll 414 (598)
.|... +.+.+++.+...++ ..+++.++ ..+ ++ .+--|+-++++|.+.+........+..+.
T Consensus 211 ----~w~~~--~~d~P~~h~~is~~El~~I~~~k~~~--~~~---~~----~~vP~~~i~ts~~vwai~~~~f~~~~~~~ 275 (466)
T KOG2532|consen 211 ----LWFLF--YSDSPSKHPNISEKELKYIEKGKSEA--HVK---KK----PPVPYKAILTSPPVWAIWISAFGGNWGFY 275 (466)
T ss_pred ----HHHHH--hcCCcccCCCCCHHHHHHHHhccccc--ccC---CC----CCCCHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 12111 11222211110000 00000000 000 00 11246678888888876555444333223
Q ss_pred hhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------hHHHHHHHHHHHHHHHHHHHHHhhc
Q 007555 415 TPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI-------LKAGAAGLIFQASLLAMAVAVYWSG 486 (598)
Q Consensus 415 ~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~-------~r~g~~~l~~q~~~L~~~v~~~~~g 486 (598)
.+..-++.|+++ +|++-..-|++.+.=-+...+-.++++.+..|+.. .|-..-.+ ...+.++.....+
T Consensus 276 ~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i----~~~~~ai~l~~l~ 351 (466)
T KOG2532|consen 276 LLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTI----AFGGPAVFLLVLA 351 (466)
T ss_pred HHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhH----HHHHHHHHHHeee
Confidence 444567779886 89999999988887777776666666666555433 11111111 1222333322221
Q ss_pred ccc--cc-hhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhcc--CcchhH
Q 007555 487 SLS--QQ-NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAN--DVSHFG 560 (598)
Q Consensus 487 ~~~--~~-~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~--~~~~f~ 560 (598)
-.+ .. ..+..+...+.+++ ++......=....-+++-|-++|+.+.+..++. ..+.+.+.+.+ ..++..
T Consensus 352 ~~~~~~~~~a~~~l~~~~~~~g-----~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~ 426 (466)
T KOG2532|consen 352 FTSDEHRLLAVILLTIAIGLSG-----FNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWR 426 (466)
T ss_pred ecCCCcchHHHHHHHHHHHHcc-----cchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHH
Confidence 111 11 12222222333333 333333333333377899999999999999986 55566677775 255777
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 007555 561 FLATLSLLSVVGAAWMFCHWL 581 (598)
Q Consensus 561 ~l~l~S~~~V~~a~~l~~~~l 581 (598)
+..++..+....+...|..+.
T Consensus 427 ~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 427 IVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHHHHHHhchheeEee
Confidence 777777777777777777664
No 108
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.26 E-value=7.4e-05 Score=77.71 Aligned_cols=132 Identities=12% Similarity=0.070 Sum_probs=87.9
Q ss_pred hHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH-HHHHHHHHhhcccccchhHH
Q 007555 417 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASL-LAMAVAVYWSGSLSQQNPLL 495 (598)
Q Consensus 417 ~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~-L~~~v~~~~~g~~~~~~~~~ 495 (598)
...++.|..+.+.++.++|++.++..++.+++....+++.+|+|..+....+....... +..+.... ... ....
T Consensus 19 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~ 93 (365)
T TIGR00900 19 QVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVAL-LGG----LNIW 93 (365)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH-cCC----CcHH
Confidence 34555677788999999999999999999999999999999999877766543322111 11111110 010 0122
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHh-hhhc
Q 007555 496 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV-AIIA 553 (598)
Q Consensus 496 ~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~-~i~~ 553 (598)
.+..+.++.+++...++....+++.+.+|+++|||++|..++...+...++..+ +.+.
T Consensus 94 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 94 QVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 222233333444556677888999999999999999999998888776444433 4443
No 109
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.22 E-value=0.00013 Score=75.54 Aligned_cols=127 Identities=16% Similarity=0.130 Sum_probs=88.0
Q ss_pred HHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHH
Q 007555 418 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF 496 (598)
Q Consensus 418 ~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~ 496 (598)
..++.++. +.|.++.++|++.++..++..++....+++.+|+|..+....+....... +....+..+ .. .
T Consensus 17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~---~~~~~~~~~----~~--~ 87 (352)
T PF07690_consen 17 PALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG---SLLLAFASN----FW--L 87 (352)
T ss_dssp HHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH---HHHHHHHCC----HH--H
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH---HHHhhhhhh----HH--H
Confidence 34442443 57999999999999999999999999999999999888666554433222 111112111 12 2
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHh-hhhc
Q 007555 497 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV-AIIA 553 (598)
Q Consensus 497 ~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~-~i~~ 553 (598)
+..+.++.+++...++.....++.+..|+++|+++++...+..+....++... +.+.
T Consensus 88 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 145 (352)
T PF07690_consen 88 LLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI 145 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred Hhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh
Confidence 33334445555556788999999999999999999999999888887555444 4444
No 110
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.21 E-value=0.00012 Score=77.18 Aligned_cols=157 Identities=15% Similarity=0.004 Sum_probs=99.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~ 223 (598)
++++++.++...++...+.......+|.++.+..+ +....+..........+...+.+|.+.||++||+++..+.++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~ 276 (375)
T TIGR00899 197 ASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGV 276 (375)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHH
Confidence 56778888887777666666777778888877777 87777776666566667778899999999999998876543211
Q ss_pred HHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHH
Q 007555 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (598)
Q Consensus 224 ~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~ 303 (598)
. . .+...... + .+.+++..++.+.......+.....+ .| +.++ +..++++.......+
T Consensus 277 ~----~--~~~~~~~~-----~--~~~~~~~~~~~g~~~g~~~~~~~~~~-~~----~~~~----~~~~~~~~~~~~~~~ 334 (375)
T TIGR00899 277 A----F--YTGLAADN-----S--LWALLMLQLLNAIFIGILAGIGMLYF-QD----LMPG----RAGAATTLYTNTGRV 334 (375)
T ss_pred H----H--HHHHHHHH-----H--HHHHHHHHHHHHHHHHHHHHHHHHHH-HH----hCcc----hhhHHHHHHHHHHHH
Confidence 1 1 11111111 1 12223333333332222222222212 22 3333 445899999999899
Q ss_pred HHHhhHHHHHHHHhhhchhH
Q 007555 304 CEIAGASLFGILLSKYEPVT 323 (598)
Q Consensus 304 ~~i~GP~lgGlL~s~~~~~~ 323 (598)
...+||.++|.+.+..|...
T Consensus 335 g~~~g~~~~g~~~~~~g~~~ 354 (375)
T TIGR00899 335 GWIIAGSVGGILAERWSYHA 354 (375)
T ss_pred HHHHHHHHHHHHHHhccchh
Confidence 99999999999998777544
No 111
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.17 E-value=0.00011 Score=77.50 Aligned_cols=126 Identities=17% Similarity=0.105 Sum_probs=85.9
Q ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-HHhhcccccchhHHHH
Q 007555 419 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNPLLFF 497 (598)
Q Consensus 419 l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~-~~~~g~~~~~~~~~~~ 497 (598)
..+.+.++.|.++.++|++.++..++.+++.++.+++.+|+|..+....+.... ..+.. .....+ ...+
T Consensus 27 ~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~----~~~~~~~~~~~~------~~~~ 96 (385)
T TIGR00710 27 AFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIF----ALSSLGLALSNN------IETL 96 (385)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH----HHHHHHHHHHcc------HHHH
Confidence 444455678999999999999999999999999999999999877665443221 11111 111111 1122
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHH-HHHHhhhhcc
Q 007555 498 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES-VMLGVAIIAN 554 (598)
Q Consensus 498 ~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~l-l~~~~~i~~~ 554 (598)
..+.++.+++....+.....++++..|+++||++++...+....... .+.+.+.+.+
T Consensus 97 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 154 (385)
T TIGR00710 97 LVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV 154 (385)
T ss_pred HHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333444555566788889999999999999999999988877653 3344454443
No 112
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.15 E-value=0.00079 Score=74.93 Aligned_cols=304 Identities=16% Similarity=0.156 Sum_probs=152.0
Q ss_pred HHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHH-HHHHHHHHHHHhhh
Q 007555 190 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVA 268 (598)
Q Consensus 190 ~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv-~~llg~i~~l~~~a 268 (598)
...++.++-+|..|.+.|||.||..+...-+...+- ..+..+ . . .|+.+ .-+.|.....++..
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~----~~~~~~--~------~----~~~~~~~~l~g~~~~~~s~~ 133 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILP----ALCLLF--Q------G----YWFFLLLGLSGGFSAIFSVG 133 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHh----HHHHHH--H------H----HHHhhhcccccchhhhhhhh
Confidence 457788999999999999999999876554321111 111111 0 0 12221 11223333332222
Q ss_pred hhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007555 269 LGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNK 348 (598)
Q Consensus 269 ~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~r 348 (598)
. +...| ++.+ +.-...=+.+...-.....+||+++|.+.-..|......++.+....+. .+.+
T Consensus 134 ~--a~vad----is~~---~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~--------~y~~ 196 (463)
T KOG2816|consen 134 F--AYVAD----ISSE---EERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSL--------LYML 196 (463)
T ss_pred h--hheee----ccch---hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHH--------HHHh
Confidence 2 22223 4443 2455555666666667889999999999988774333333222111111 1122
Q ss_pred hcccc-cccccccccccCCCCCCCCCCCccchhhhHHHHHHHHHHHh---cCCchHHH-HHHHHHHHHhhhhhhHHHHHH
Q 007555 349 ISSGV-LDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYM---QQPVLPAS-LAYVLLCLNVVLTPGSLMTAF 423 (598)
Q Consensus 349 v~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~---~~pvll~~-l~~~lL~~~vll~f~~l~~~y 423 (598)
+..|+ +++++.+...+++. .++ +....+..+-++.+. ++|..+.. +...+++...........+.|
T Consensus 197 ~~l~Esl~~~~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~y 267 (463)
T KOG2816|consen 197 LFLPESLQEKERSDATLREL----TPG-----SLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLY 267 (463)
T ss_pred hccccccCcccccccccccc----CCC-----cccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEE
Confidence 21122 11111110000000 001 011122233333332 23433332 222233333311111123345
Q ss_pred HH-hcCCChhHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHH
Q 007555 424 LT-QRGLNPSIIGGFSGLCASMGVAATFL-SAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI 501 (598)
Q Consensus 424 l~-~lg~s~~~iG~~~g~gavgGLlGtl~-~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i 501 (598)
++ ..|.++..++.+.+..+.-+.++-++ .|.+++.+|..+....++..+.. +...+..+.. ...++..++
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~----~~~~~af~~~----~w~~~~~~v 339 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFL----QLLLFAFATE----TWMMFAAGV 339 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHH----HHHHHHHhcc----chhhhHHHH
Confidence 55 36999999998888888888776654 55888888887755555554422 1121111111 111222222
Q ss_pred HHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHH
Q 007555 502 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV 545 (598)
Q Consensus 502 ~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll 545 (598)
..+-. ........+..=..++++++|+|++....+..+...+
T Consensus 340 ~~~~~--~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~ 381 (463)
T KOG2816|consen 340 VVALA--GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVV 381 (463)
T ss_pred HHHhh--cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhh
Confidence 21111 1234566778888999999999999999888887533
No 113
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.14 E-value=0.007 Score=69.26 Aligned_cols=75 Identities=19% Similarity=0.043 Sum_probs=53.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFA----WPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNT 220 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fA----lpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~ 220 (598)
+.+.|.-.+++..+...+..+...+ ++....++.++ -..+.+..+..+...+..|+.|.+.|.++||.+.+...+
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~ 116 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSL 116 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHH
Confidence 5567777777777777776555442 34333444444 344566667788888899999999999999999987765
No 114
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.13 E-value=0.0016 Score=69.56 Aligned_cols=260 Identities=14% Similarity=0.067 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHH
Q 007555 152 LYACCLAGNLVEQLWN-FAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLS 229 (598)
Q Consensus 152 L~~gq~lS~~G~~i~~-fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls 229 (598)
++.-..+..++|+++. +...+| ..++ +.-+++.+-.+.....+++|+++|.++||++|||.-+..-+.. .++
T Consensus 39 yl~vY~La~~aDWLQGpY~Y~LY--~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily----~~s 112 (354)
T PF05631_consen 39 YLLVYLLAMAADWLQGPYLYALY--ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILY----SLS 112 (354)
T ss_pred HHHHHHHHHHHHHhhcchhHHHH--HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH----HHH
Confidence 5566677888888873 233344 5678 8889999999999999999999999999999999765443222 233
Q ss_pred HHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecC-CC-chhHHHHHHHHHH-HHHHHHHH
Q 007555 230 AAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAG-IN-RPIALAKANAVLN-RIDLLCEI 306 (598)
Q Consensus 230 ~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~-~~-~~~~L~~aNa~l~-~id~~~~i 306 (598)
|.. ... +. .+.+++-=++.|....+... +.| +|.+.=-. ++ +++.|.+.=+.+. ..+.+..|
T Consensus 113 cl~----k~~----~~--~~~L~~GRvlgGiaTSLLfS----~FE-sW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI 177 (354)
T PF05631_consen 113 CLT----KHS----SN--YPVLLLGRVLGGIATSLLFS----AFE-SWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAI 177 (354)
T ss_pred HHH----Hhc----cc--cHHHHHHHHHHHHHHHHHHH----HHH-HHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHH
Confidence 422 111 11 12333333333433333222 222 25422100 00 1234544444444 33444555
Q ss_pred hhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccchhhhHHHH
Q 007555 307 AGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAI 386 (598)
Q Consensus 307 ~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 386 (598)
++-.++-.+....+-.+...+.+ +.+...+...++.+.+.++... + .+ ..+..++.
T Consensus 178 ~aGv~a~~l~~~~~~g~vaPF~~-----a~~~l~~~~~~I~~~W~ENyg~--~-------------~~----~~~~~~~~ 233 (354)
T PF05631_consen 178 GAGVVANVLADWFGFGPVAPFDA-----AIVLLAVAAVLILKTWPENYGD--T-------------SS----SSSLSGSF 233 (354)
T ss_pred HHhHHHHHHHHHhCCCCcchHHH-----HHHHHHHHHHHHHhcccccCCC--c-------------cc----ccchHHHH
Confidence 55555555555433211111211 1111111112333332211100 0 00 12456788
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHH-------HHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHH-Hh
Q 007555 387 KLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAF-------LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLV-RR 458 (598)
Q Consensus 387 ~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~y-------l~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~-rr 458 (598)
+++++.++++|.+...-..-. .|.+.|..| +...+ .+--+|++.+..++...+|+-+++++. ++
T Consensus 234 ~~a~~~i~~d~ril~LG~~qs-------lFE~smy~FVflWtPaL~~~~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~~ 305 (354)
T PF05631_consen 234 REAWRAILSDPRILLLGLIQS-------LFEGSMYLFVFLWTPALDPDD-EELPLGLIFSSFMVAMMLGSSLFSRLLSKS 305 (354)
T ss_pred HHHHHHHHcCchhHHHHHHHH-------HHHHHHHHheeeeeceecCCC-CCCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 899999998876543211111 123333332 22111 223489999999999999999998764 45
Q ss_pred hhhhHH
Q 007555 459 LGILKA 464 (598)
Q Consensus 459 lg~~r~ 464 (598)
..+...
T Consensus 306 ~~~e~~ 311 (354)
T PF05631_consen 306 LRPESL 311 (354)
T ss_pred CCHHHH
Confidence 555443
No 115
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.12 E-value=0.015 Score=63.36 Aligned_cols=382 Identities=15% Similarity=0.086 Sum_probs=195.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHH--HHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAI--ALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v--~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~ 221 (598)
++..-+.||.+-..-..+=.+|..--|+-+ .+..+ |.-+.+++...-.+...++=.+-|.+.||++-|++-+.+-++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 334456678887777777777777655544 45566 899999998888888888999999999999888876655432
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHH---
Q 007555 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLN--- 298 (598)
Q Consensus 222 q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~--- 298 (598)
...+++....... ..+ ++.+++..+++|..+.-|.+...- +. .|-| ++ +--.||+...
T Consensus 89 ------~~IP~~~~~~a~~--~~~--~~~ll~~gll~G~~GasFav~m~~-~s-~~fP----~~---~qG~AlGI~g~GN 149 (417)
T COG2223 89 ------LLIPCLGLAFAVT--YPS--TWQLLVIGLLLGLAGASFAVGMPN-AS-FFFP----KE---KQGLALGIAGAGN 149 (417)
T ss_pred ------HHHHHHHHHHHcc--CCc--hHHHHHHHHHHhcccceehccccc-cc-ccCC----hh---hhhHHHHHhcccc
Confidence 1223322222221 122 256777777788777766655422 22 2443 32 4445555554
Q ss_pred HHHHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccc
Q 007555 299 RIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNI 378 (598)
Q Consensus 299 ~id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 378 (598)
.--.++++++|.+....-.. .......+ ...-.+...+..++..+ +.++. ++..
T Consensus 150 ~G~av~q~~~P~v~~~~g~~-~w~~~~~i----~~~~l~v~~v~~~~~~~---d~p~~-r~~~----------------- 203 (417)
T COG2223 150 LGVAVAQLVAPLVAVAFGFL-AWRNVAGI----YVVALAIAAVLAWLGMN---DVPEH-RASV----------------- 203 (417)
T ss_pred ccHHHHHHHHHHHHHHHhhH-HHHHHHHH----HHHHHHHHHHHHHHHhC---CChhh-hccc-----------------
Confidence 33456689999887765420 01111111 11111111111122221 11111 0000
Q ss_pred hhhhHHHHHHHHHHHhcCC-chHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007555 379 VDVGIEAIKLGWKEYMQQP-VLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLV 456 (598)
Q Consensus 379 ~~~~~~~i~eG~~~~~~~p-vll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~ 456 (598)
+.... +-++-.++++ .++-++.+...+-.+ ..+...++.|+++ -|.++..-|..-..+..-|.+.--+.+++.
T Consensus 204 -~~~~~---~~~~~v~~~~~~W~lsllY~~tFG~F-vgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~Ls 278 (417)
T COG2223 204 -KPQLP---AQLKAVFSNKDTWLLSLLYFATFGGF-VGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLS 278 (417)
T ss_pred -cccch---hHHHHHhcCcchHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhh
Confidence 00010 2234455554 455444444333222 2455666777774 699988888776776666666666788999
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHHhh-cc--cccch-hHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHH
Q 007555 457 RRLGILKAGAAGLIFQASLLAMAVAVYWS-GS--LSQQN-PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIG 532 (598)
Q Consensus 457 rrlg~~r~g~~~l~~q~~~L~~~v~~~~~-g~--~~~~~-~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~ 532 (598)
.|+|-.|..++.... .++...+..+.. +. ..+.. ....++...++..+| |-.+-+++=..-| ++-|-|.
T Consensus 279 DR~Gg~rv~~~~f~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~G----nGsvfk~Ip~if~-~~~G~v~ 351 (417)
T COG2223 279 DRIGGRRVTLAVFVG--MALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLG----NGSVFKMIPVIFP-KETGAVT 351 (417)
T ss_pred hhccchhHHHHHHHH--HHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccC----cchheeechHHHH-hhhhHHH
Confidence 999988887654332 111111111111 00 00111 112222223333333 2222222222112 2677777
Q ss_pred HHHHHHHHHHH-HHHHHhhhhccCcc-hhHHHHHHHHHHHHHHHHHHHHHhcC
Q 007555 533 TTEISVASLVE-SVMLGVAIIANDVS-HFGFLATLSLLSVVGAAWMFCHWLLN 583 (598)
Q Consensus 533 sv~~sl~~~~~-ll~~~~~i~~~~~~-~f~~l~l~S~~~V~~a~~l~~~~l~~ 583 (598)
|...++-.+-- .++..++....... ......+.....+.+..++...+.|+
T Consensus 352 G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 352 GIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77776655431 34444444444433 44444555555555544455444443
No 116
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.09 E-value=0.00028 Score=76.52 Aligned_cols=127 Identities=15% Similarity=0.118 Sum_probs=85.6
Q ss_pred HHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHH
Q 007555 418 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF 496 (598)
Q Consensus 418 ~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~ 496 (598)
+++..|+. ++|+++..+|+..+...+...+...+.+++.+|+|..+...++........ +......+ ...
T Consensus 31 ~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~---~~~~~~~~----~~~-- 101 (400)
T PRK11646 31 PLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGF---ATMAIAHE----PWL-- 101 (400)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHH---HHHHHhcc----HHH--
Confidence 45555654 689999999999999999998889999999999998777665543222111 11111111 111
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhhhc
Q 007555 497 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAIIA 553 (598)
Q Consensus 497 ~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i~~ 553 (598)
+..+.++..++...++...++++++.+|+|+||+.+|..++..+....++ .+.+.+.
T Consensus 102 l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~ 159 (400)
T PRK11646 102 LWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL 159 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122223333345677788899999999999999999999888886444 4446554
No 117
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.08 E-value=0.00033 Score=74.96 Aligned_cols=130 Identities=16% Similarity=0.138 Sum_probs=83.5
Q ss_pred hhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhH
Q 007555 415 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 494 (598)
Q Consensus 415 ~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~ 494 (598)
.....++.|..+.|.++.++|++.++..++..++....+++.+|+|..+....+...... ......+..+ .
T Consensus 24 ~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~---~~~~~~~~~~------~ 94 (381)
T PRK03633 24 VLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAA---GCAGLGLMVG------F 94 (381)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcc------H
Confidence 344567778888999999999999999999999999999999999988766554332111 1111111111 1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhhhc
Q 007555 495 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAIIA 553 (598)
Q Consensus 495 ~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i~~ 553 (598)
..+....++.+++...+.....+...+..|+++|||.+|...+..+....++ .+.+.+.
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 95 WSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 1122222233333333344455666778899999999999888777665333 4444443
No 118
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.02 E-value=0.00045 Score=74.13 Aligned_cols=126 Identities=10% Similarity=-0.002 Sum_probs=82.7
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 495 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~ 495 (598)
.+...+.+.++.|+++.++|++.+...++.++|.+..+++.+|+|..+....+...... ..+......+ ..
T Consensus 34 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~---~~~~~~~~~~------~~ 104 (406)
T PRK11551 34 AGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGL---FSLATAQAWD------FP 104 (406)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH---HHHHHHHhcc------HH
Confidence 33444555567899999999999999999999999999999999988776654322111 1111111111 11
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHhh
Q 007555 496 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 550 (598)
Q Consensus 496 ~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~~ 550 (598)
.+....++.+++..........++++..|+++||+.++...........+...++
T Consensus 105 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 159 (406)
T PRK11551 105 SLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIG 159 (406)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222233333344566788899999999999999998887766654444443
No 119
>TIGR00895 2A0115 benzoate transport.
Probab=98.01 E-value=0.00023 Score=74.96 Aligned_cols=127 Identities=11% Similarity=0.004 Sum_probs=84.5
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHH
Q 007555 420 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 499 (598)
Q Consensus 420 ~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~ 499 (598)
++.+.++.|+++.++|++.+...++.+++.++.+++.+|+|..+....+......+ ........+ ...+..
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~---~~~~~~~~~------~~~~~~ 110 (398)
T TIGR00895 40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVF---TLLCALATN------VTQLLI 110 (398)
T ss_pred HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHH---HHHHHHccc------hHHHHH
Confidence 33344568999999999999999999999999999999999877665543322111 111111111 111222
Q ss_pred HHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHH-HHHHhhhhccC
Q 007555 500 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES-VMLGVAIIAND 555 (598)
Q Consensus 500 ~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~l-l~~~~~i~~~~ 555 (598)
..++.+++.........+++.+..|++.||+++|...+...+... .+.+.+.+.+.
T Consensus 111 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (398)
T TIGR00895 111 LRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167 (398)
T ss_pred HHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc
Confidence 333344455556778889999999999999999998887776653 34444555443
No 120
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.01 E-value=0.0002 Score=75.75 Aligned_cols=121 Identities=10% Similarity=0.038 Sum_probs=82.5
Q ss_pred hHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHH
Q 007555 417 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF 496 (598)
Q Consensus 417 ~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~ 496 (598)
.+.++.+.++.|+++.+.|.+.++..++..++.+..+++.+|+|..+...++....... ........+ ...
T Consensus 11 ~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~---~~~~~~~~~----~~~-- 81 (377)
T PRK11102 11 LPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALA---AVACALAQT----IDQ-- 81 (377)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHH---HHHHHHHcc----HHH--
Confidence 34566677788999999999999999999999999999999999877665544322111 111111111 111
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH
Q 007555 497 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 546 (598)
Q Consensus 497 ~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~ 546 (598)
+..+.++.+++...++....+++++..|+++||+.++.......+...++
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 131 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLA 131 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122233344445677888999999999999999999888777665333
No 121
>PRK12382 putative transporter; Provisional
Probab=98.00 E-value=0.00059 Score=73.01 Aligned_cols=136 Identities=7% Similarity=-0.029 Sum_probs=82.7
Q ss_pred hhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhH
Q 007555 416 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 494 (598)
Q Consensus 416 f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~ 494 (598)
..+.++.|+. +.|+++.++|++.++..++..++....+++.+|+|..|....+.................... .....
T Consensus 34 ~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 112 (392)
T PRK12382 34 PLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVS-APFKF 112 (392)
T ss_pred HhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccc-hhHHH
Confidence 3345565665 589999999999999999999999999999999999887665433211110000000000000 00112
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHH-HHHhhhh
Q 007555 495 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV-MLGVAII 552 (598)
Q Consensus 495 ~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll-~~~~~i~ 552 (598)
..+..+-++.++|...+.....++.++.+|+++||+.+|...+..++...+ +.+.+.+
T Consensus 113 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l 171 (392)
T PRK12382 113 ALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLL 171 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 222222233333433445566678889999999999999877665555433 3333444
No 122
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.98 E-value=0.0039 Score=70.34 Aligned_cols=359 Identities=14% Similarity=0.067 Sum_probs=181.8
Q ss_pred ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHH-H
Q 007555 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVL-A 258 (598)
Q Consensus 180 S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~l-l 258 (598)
+--..+........-..+.+|+++.+.||++.|++++.-.++.....+++ .| .. + .|.+++..-+ .
T Consensus 79 s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~ls----sF--~~-----~--i~~l~lt~gvi~ 145 (509)
T KOG2504|consen 79 SSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLS----SF--AT-----S--LWQLYLTFGVIG 145 (509)
T ss_pred CccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHH----HH--Hh-----h--HHHHHHHHHHHh
Confidence 55557777777666778889999999999999999987766533322211 11 11 1 2344443221 2
Q ss_pred HHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHH
Q 007555 259 GAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPV 338 (598)
Q Consensus 259 g~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~ 338 (598)
|+--.+ ..++++ ++++.=-+.+...||+....-..+..++=|.+--.++...|....++.-.+.. .+.
T Consensus 146 G~G~~~---~~~pai------viv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~-l~~-- 213 (509)
T KOG2504|consen 146 GLGLGL---IYLPAV------VILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGIS-LNV-- 213 (509)
T ss_pred hccchh---hhcchh------hhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHH-HHH--
Confidence 211111 112221 12220001267788888888788877777888888888778654443322221 111
Q ss_pred HHHHHHHHHhhccccccc-------c----cccccc-cCCCCCCCCCCCc---------cchhhhHH--HHHHHH----H
Q 007555 339 MIILTWFTNKISSGVLDR-------A----KCSQSC-CRTSNEGPVPDAD---------NIVDVGIE--AIKLGW----K 391 (598)
Q Consensus 339 ~~l~~~li~rv~~~~l~~-------~----~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~--~i~eG~----~ 391 (598)
++....++.+..+..+. . +..... .+...+.+.+..+ ...+.-++ ..+..+ .
T Consensus 214 -~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 292 (509)
T KOG2504|consen 214 -LVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDL 292 (509)
T ss_pred -HHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhH
Confidence 11111222111000000 0 000000 0000000000000 00000011 111111 2
Q ss_pred HHhcCCchHHHHHH-HHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 007555 392 EYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 470 (598)
Q Consensus 392 ~~~~~pvll~~l~~-~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~ 470 (598)
-++++|.++..... .+.++.. ..+....+.|..+.|++........++.++..+.|=++.|++..+....+.....+
T Consensus 293 ~ll~~~~fl~~~~~~~~~~~g~-~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~- 370 (509)
T KOG2504|consen 293 SLLKDPKFLLLALSNLFAYLGF-NVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLL- 370 (509)
T ss_pred HHHcCchHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHH-
Confidence 36777776642222 1112211 12334555677789999999999999999999999999999988776433222111
Q ss_pred HHHHHHHHHHHHHh-hcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHH
Q 007555 471 FQASLLAMAVAVYW-SGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLG 548 (598)
Q Consensus 471 ~q~~~L~~~v~~~~-~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~ 548 (598)
.++..++...+ +... ....++...... ++....+......+.=+.++.|+..+..|+....+.++. .++.+
T Consensus 371 ---~ll~~gl~~~~~p~~~--~~~~l~~~~~~f--G~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPi 443 (509)
T KOG2504|consen 371 ---TLLIAGLARLFLPFAT--TYVGLIVFSILF--GFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPI 443 (509)
T ss_pred ---HHHHHHHHHHHHHHhc--cHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCccc
Confidence 12223333222 1111 111111111111 111223333344577788999999999999999998886 45566
Q ss_pred hhhhccCcchhHHHHHHHHHHHHHH
Q 007555 549 VAIIANDVSHFGFLATLSLLSVVGA 573 (598)
Q Consensus 549 ~~i~~~~~~~f~~l~l~S~~~V~~a 573 (598)
.|.+-+..+++.......-...+.+
T Consensus 444 ag~~~d~tg~Y~~~f~~~g~~~~~s 468 (509)
T KOG2504|consen 444 AGLLYDITGNYDHAFYFCGLCFLLS 468 (509)
T ss_pred ceeeeeccCCeeeehhhcChHHHHH
Confidence 6877777776666654444444333
No 123
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.98 E-value=0.0017 Score=72.95 Aligned_cols=243 Identities=15% Similarity=0.084 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHH
Q 007555 183 PVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVE 262 (598)
Q Consensus 183 ~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~ 262 (598)
..+....+-.+.++++-++.|.+.||+|-.+.|..++++-.+...+. .+.+. .+.+.++=+++|.+|
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~----~~~~s---------~~~~ialr~llGl~e 148 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLT----AAVHS---------FPGLIALRFLLGLFE 148 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHH----HHHhh---------hHHHHHHHHHHHHHh
Confidence 45666777788999999999999999997777777765422221111 11111 245566677889999
Q ss_pred HHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHh------hhchhHHHHHHHHHHHHHH
Q 007555 263 RLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS------KYEPVTCLKFAAGLIMWSL 336 (598)
Q Consensus 263 ~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s------~~~~~~~l~~~~~~~~~S~ 336 (598)
...-|+...-+ ..|- ++ +++..--+....-.++++++|..++..++. ..|.....++.. ++++
T Consensus 149 s~~wP~~~~~l-g~wy----~~---~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G---~i~~ 217 (495)
T KOG2533|consen 149 SGGWPGVVAIL-GNWY----GK---SERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEG---VITL 217 (495)
T ss_pred cccchHHHHHH-Hhhc----Ch---hhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHH---HHHH
Confidence 88877764433 2332 32 367777777777777778888777777643 223222222221 1222
Q ss_pred HHHHHHHHHHHhhcccc----ccccccc--ccccCCCCCCCCCCCccchhhhHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 007555 337 PVMIILTWFTNKISSGV----LDRAKCS--QSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCL 410 (598)
Q Consensus 337 ~~~~l~~~li~rv~~~~----l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~ 410 (598)
+..++..+.+.. .|+ +++.++. .+..+++ ...+.. +. + =+.+++..+++|.+.+....-+...
T Consensus 218 ~~gi~~f~~lp~--~P~~~~fl~~~ek~~~~~~~~~~--~~~~~~----~~-~--~~~~~~~a~~dp~vw~~~l~~~~~~ 286 (495)
T KOG2533|consen 218 VLGIVVFFFLPD--NPSKAWFLTDEEKELVVERLRES--PSGGIE----NK-F--KWKGFKEALKDPGVWPFSLCYFFLK 286 (495)
T ss_pred HHHheEEEEecC--ChhhccccchHHHHHHHHHHHhc--cCCCcc----cc-c--CHHHHHHHHhchhHHHHHHHHHHHh
Confidence 211110001110 111 1100000 0000000 000000 00 0 1245666778887765332222222
Q ss_pred HhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007555 411 NVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (598)
Q Consensus 411 ~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg 460 (598)
.+...+....+.|+++ .|++..+-+.+.....++|++|+++++.+..|++
T Consensus 287 lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 287 LVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred hccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 2212456677778887 6799999999999999999999999999999975
No 124
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.95 E-value=0.00093 Score=72.18 Aligned_cols=131 Identities=17% Similarity=0.106 Sum_probs=82.3
Q ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHH
Q 007555 419 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 498 (598)
Q Consensus 419 l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~ 498 (598)
.+.+|+++.|.++.+.|...+..+++..++....+++.+|+|..|...++........... ..+..... .... +.
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~-~~~~~~~~--~~~~--l~ 109 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAF-IVFGLGHA--NYPL--IL 109 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH-HHHhccCc--cHHH--HH
Confidence 4556777889999999999999999999999999999999999887765543221111110 00011111 1111 11
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HH-HHHhhhhcc
Q 007555 499 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SV-MLGVAIIAN 554 (598)
Q Consensus 499 ~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll-~~~~~i~~~ 554 (598)
..-.+.++|.............+.+|+++|||.+|...+..++.. .. +.+.+.+.+
T Consensus 110 ~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~ 167 (402)
T TIGR00897 110 LFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP 167 (402)
T ss_pred HHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 122223344433444556677788999999999999988877653 23 333344443
No 125
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.95 E-value=0.00026 Score=78.14 Aligned_cols=156 Identities=12% Similarity=0.028 Sum_probs=97.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccC--CchHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS--PRIPAYICLNTV 221 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~--~Rr~vmi~~d~~ 221 (598)
++++|+.+..+.++..++......-+|.|..+. + +....+.+..+..+..++..|++|.+.||. ++|+.....- .
T Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~ 316 (455)
T TIGR00892 239 THRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDK-GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSF-A 316 (455)
T ss_pred cCchHHHHHHHHHHHHHHccchHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHH-H
Confidence 667888888888888887776666778887664 5 888888888888888889999999999984 3333322111 0
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHH
Q 007555 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (598)
Q Consensus 222 q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id 301 (598)
... .....+.... . .+ .+.+++..++.|.......+.....+ .| .+++ ++..++++.+....
T Consensus 317 -~~~--~~l~~ll~~~-~----~~--~~~~~i~~~~~G~~~g~~~~~~~~~~-~~----~~~~---~~~g~~~g~~~~~~ 378 (455)
T TIGR00892 317 -LLF--NGLTHLLCAL-A----GD--YTGLVIYCIFFGLSFGSVGALLFEVL-MD----LVGA---QRFSSAVGLVTIVE 378 (455)
T ss_pred -HHH--HHHHHHHHHH-h----ch--HHHHHHHHHHHHHHhchHHHHHHHHH-HH----HhhH---HHHhhHHhHHHHHH
Confidence 001 0111111111 1 11 13334444444444333333222211 22 4443 37889999999999
Q ss_pred HHHHHhhHHHHHHHHhhhc
Q 007555 302 LLCEIAGASLFGILLSKYE 320 (598)
Q Consensus 302 ~~~~i~GP~lgGlL~s~~~ 320 (598)
.++.++||.++|.+....+
T Consensus 379 ~lg~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 379 CCAVLIGPPLAGRLVDATK 397 (455)
T ss_pred HHHHHccccceeeeehhcC
Confidence 9999999999999987654
No 126
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.93 E-value=0.00041 Score=74.30 Aligned_cols=136 Identities=12% Similarity=-0.057 Sum_probs=85.8
Q ss_pred HHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHH
Q 007555 418 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF 496 (598)
Q Consensus 418 ~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~ 496 (598)
..++.|+. +.|.++.++|++.++..++..++....+++.+|+|..|....+..................+. .......
T Consensus 36 ~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 114 (399)
T PRK05122 36 AVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAW-PVLSLLL 114 (399)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhcc-chhHHHH
Confidence 45556665 579999999999999999999999999999999999887765543211110111111111110 0111222
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhcc
Q 007555 497 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAN 554 (598)
Q Consensus 497 ~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~ 554 (598)
++.+-++.++|...++....++..+.+|+++|||+++......++.. +.+.+.+.+..
T Consensus 115 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 115 LLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH 173 (399)
T ss_pred HHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 22233334445555667777888899999999999998776655554 33444455544
No 127
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.93 E-value=0.00084 Score=71.91 Aligned_cols=128 Identities=15% Similarity=0.079 Sum_probs=80.7
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 495 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~ 495 (598)
..++++.+..+.|+++.++|+..++..++.+++....+++.+|+|..+....+..... ++........ + ..
T Consensus 22 ~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~----~~~~l~~~~~--~---~~ 92 (382)
T PRK10091 22 IMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCV----IGNAMFTLSS--S---YL 92 (382)
T ss_pred HHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHH----HHHHHHHHhC--c---HH
Confidence 4456666666789999999999999999999999999999999998776654433211 1111111111 1 11
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHH-HHHhhhh
Q 007555 496 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV-MLGVAII 552 (598)
Q Consensus 496 ~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll-~~~~~i~ 552 (598)
.+...-++.+++..........+.++..|+++|+++++...+...+...+ +.+.+.+
T Consensus 93 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 150 (382)
T PRK10091 93 MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL 150 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence 11112222333322333455677888899999999999887766665433 3333443
No 128
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.93 E-value=0.00065 Score=74.29 Aligned_cols=131 Identities=21% Similarity=0.087 Sum_probs=83.7
Q ss_pred hhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhH
Q 007555 415 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 494 (598)
Q Consensus 415 ~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~ 494 (598)
.++..++.+..+.|+++.+.|++.+...++..++.+..+++.+|+|..+...++......+ .+......+ .
T Consensus 41 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~---~~~~~~~~~------~ 111 (434)
T PRK11663 41 SFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGII---NILFGFSSS------L 111 (434)
T ss_pred hHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHH---HHHHHHHhH------H
Confidence 3445566676789999999999999999999999999999999999877655443221111 111111111 1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhcc
Q 007555 495 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAN 554 (598)
Q Consensus 495 ~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~ 554 (598)
..+....++.+++.-........++++..|+++||+++|...+...+.. +.+.+.+.+.+
T Consensus 112 ~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 112 WAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111222212235667888999999999999999988887765 34455555544
No 129
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.92 E-value=0.00019 Score=74.93 Aligned_cols=125 Identities=17% Similarity=0.072 Sum_probs=82.6
Q ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHH
Q 007555 421 TAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCL 500 (598)
Q Consensus 421 ~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~ 500 (598)
+.+..+.|+++.++|++.++..++..++....+++.+|+|..+....+...... .........+ ...+..+
T Consensus 18 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~---~~~~~~~~~~------~~~~~~~ 88 (399)
T TIGR00893 18 PMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGV---FTGLQAFAGA------YVSLYIL 88 (399)
T ss_pred HHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHH---HHHHHHHHcC------HHHHHHH
Confidence 334446899999999999999999999999999999999987665544321111 1111111111 1112222
Q ss_pred HHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhhhcc
Q 007555 501 IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAIIAN 554 (598)
Q Consensus 501 i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i~~~ 554 (598)
.++.+++...+......+..+..|+++||+.++...+.......+. .+.+.+..
T Consensus 89 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 143 (399)
T TIGR00893 89 RVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI 143 (399)
T ss_pred HHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 2333444445677888999999999999999999998887775444 33344433
No 130
>PRK10054 putative transporter; Provisional
Probab=97.91 E-value=0.001 Score=71.94 Aligned_cols=128 Identities=13% Similarity=0.094 Sum_probs=83.0
Q ss_pred hhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-HHhhcccccchh
Q 007555 416 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNP 493 (598)
Q Consensus 416 f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~-~~~~g~~~~~~~ 493 (598)
..+.++.|+. +.|+++.++|++.+...++++++....+++.+|+|..+...++..... .+.. ..+..+ ..
T Consensus 26 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~----~~~~~~~~~~~----~~ 97 (395)
T PRK10054 26 TLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFA----SGFIAIPLVNN----VT 97 (395)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHH----HHHHHHHHHhH----HH
Confidence 3456677876 479999999999999999999999999999999998776554433221 1111 111111 11
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHH-HHHHhhhhc
Q 007555 494 LLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES-VMLGVAIIA 553 (598)
Q Consensus 494 ~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~l-l~~~~~i~~ 553 (598)
.++.. ..+...+...+.....+...+.+|+++|||.+|..++..++... .+.+.+.+.
T Consensus 98 ~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 98 LVVLF--FALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 11112223345566778888899999999999999988887753 334444443
No 131
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.90 E-value=0.0012 Score=70.71 Aligned_cols=120 Identities=12% Similarity=0.101 Sum_probs=78.2
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-HHhhcccccchhHHHHH
Q 007555 420 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNPLLFFL 498 (598)
Q Consensus 420 ~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~-~~~~g~~~~~~~~~~~~ 498 (598)
++.+..+.|.++.++|+..+...++.+++....+++.+|+|..+....+.... ..+.. .....+ ... +.
T Consensus 26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~----~i~~~~~~~~~~----~~~--~~ 95 (392)
T PRK10473 26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALF----IIASLLCSLAET----SSL--FL 95 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHH----HHHHHHHHHhCc----HHH--HH
Confidence 33344578999999999999999999999999999999999876655433211 11111 111111 111 11
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHh
Q 007555 499 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 549 (598)
Q Consensus 499 ~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~ 549 (598)
.+..+.+++...+......++-+..|+++|+++.+..+...+....++...
T Consensus 96 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i 146 (392)
T PRK10473 96 AGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVL 146 (392)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122223333334566677888899999999999999988877665444333
No 132
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.86 E-value=0.00014 Score=75.90 Aligned_cols=122 Identities=13% Similarity=-0.009 Sum_probs=81.3
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 495 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~ 495 (598)
+...++.+..+.|+++.++|++.++..++..++.+..+++.+|+|..+....+...... ..+......+ ..
T Consensus 14 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~---~~~~~~~~~~------~~ 84 (379)
T TIGR00881 14 FALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAI---VNLFFGFSTS------LW 84 (379)
T ss_pred hhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHH---HHHHHHHhhh------HH
Confidence 44444444446799999999999999999999999999999999987766554332211 1111111111 11
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH
Q 007555 496 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 546 (598)
Q Consensus 496 ~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~ 546 (598)
.++.+.++.+++..........++.+..|+++||+.++...+.......+.
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 135 (379)
T TIGR00881 85 VMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLL 135 (379)
T ss_pred HHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHH
Confidence 222223333344445567778899999999999999999888777665333
No 133
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.86 E-value=0.00069 Score=74.29 Aligned_cols=127 Identities=10% Similarity=-0.001 Sum_probs=85.0
Q ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHH
Q 007555 419 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 498 (598)
Q Consensus 419 l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~ 498 (598)
..+.+..+.|.++.++|++.+...++..++..+.+++.+|+|..+....+.... ..+........ . ...+.
T Consensus 24 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~----~~~~~~~~~~~---~--~~~l~ 94 (485)
T TIGR00711 24 AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAF----TLGSLLCGVAP---N--LELMI 94 (485)
T ss_pred HHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHH----HHHHHHHhCcC---C--HHHHH
Confidence 344455578999999999999999999999999999999999877665543321 11111111111 1 12222
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHH-HHHhhhhcc
Q 007555 499 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV-MLGVAIIAN 554 (598)
Q Consensus 499 ~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll-~~~~~i~~~ 554 (598)
.+.++.+++..........++.+..|+++||+.++...+.......+ +.+.+.+..
T Consensus 95 ~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 151 (485)
T TIGR00711 95 IFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE 151 (485)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc
Confidence 23333444544567788899999999999999999988877766533 344454443
No 134
>PRK03545 putative arabinose transporter; Provisional
Probab=97.83 E-value=0.0016 Score=69.79 Aligned_cols=125 Identities=10% Similarity=-0.019 Sum_probs=80.2
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHH
Q 007555 420 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 499 (598)
Q Consensus 420 ~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~ 499 (598)
.+.+..+.|.++.++|+..+...++..++....+++.+|+|..+....+...... ..+......+ ... +..
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~---~~~~~~~~~~----~~~--l~~ 102 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA---SHVLSALAWN----FTV--LLI 102 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH---HHHHHHHhcc----HHH--HHH
Confidence 4445567899999999999999999999999999999999998776654322111 1111111111 111 111
Q ss_pred HHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhhhc
Q 007555 500 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAIIA 553 (598)
Q Consensus 500 ~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i~~ 553 (598)
+-++.+++...+.....++.-+..|+++|||++|...+.......++ .+.+.+.
T Consensus 103 ~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~ 157 (390)
T PRK03545 103 SRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG 157 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 22222233333445667888899999999999999888777765443 4444443
No 135
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.82 E-value=0.0023 Score=69.21 Aligned_cols=128 Identities=12% Similarity=0.059 Sum_probs=83.5
Q ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHH
Q 007555 418 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 497 (598)
Q Consensus 418 ~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~ 497 (598)
++++.+..+.|+++.+.|+..++..++..++....+++.+|+|..+....+....... .+......+ ... +
T Consensus 41 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~---~~~~~~~~~----~~~--l 111 (394)
T PRK10213 41 SLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLS---CLLVSFANS----FSL--L 111 (394)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHH---HHHHHHHCh----HHH--H
Confidence 3556666788999999999999999999999999999999999988766554432211 111111111 111 1
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHH-HHHhhhhcc
Q 007555 498 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV-MLGVAIIAN 554 (598)
Q Consensus 498 ~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll-~~~~~i~~~ 554 (598)
...-++.+++...+......+..+.+|+++||+.++...+..+....+ +.+.+.+.+
T Consensus 112 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~ 169 (394)
T PRK10213 112 LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE 169 (394)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111122222333345567778889999999999999998877766533 344454443
No 136
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.80 E-value=0.025 Score=62.83 Aligned_cols=410 Identities=12% Similarity=0.085 Sum_probs=197.5
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------ChhHHHHHHHHHHHHHHHcccccceeeccC-CchHHH
Q 007555 143 PAHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP------SLLPVAVMGFFSKLILIVGGPLVGKLMDHS-PRIPAY 215 (598)
Q Consensus 143 ~~r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~------S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~-~Rr~vm 215 (598)
..|||.+..+..-++--.|+-.=-+--+-+|+....+ .....+++++...+.+ +...++|.++||+ .+||.+
T Consensus 17 f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY-~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 17 FGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVY-LTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred CCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHH-HHHHHHHHHHHHhcchhHHH
Confidence 3488999999888877777666666666677765544 2334555665555554 3356789999999 666655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHH
Q 007555 216 ICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANA 295 (598)
Q Consensus 216 i~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa 295 (598)
.+.-++ ..++-+.. .... ......+++.++++++-.-++.+.... +--| +-+++++ ++.+.++
T Consensus 96 ~lGail------~~iGh~~L--~~~~---~~~~~gl~i~L~~I~iG~Gl~K~NiS~-llg~----ly~~~Dp-rrD~gFt 158 (498)
T COG3104 96 VLGAIL------MAIGHLVL--AISS---VSGPGGLYIGLALIIVGTGLFKPNISS-LLGE----LYPKDDP-RRDGGFT 158 (498)
T ss_pred HHHHHH------HHHHHHHH--hccc---cccccHHHHHHHHHHhccccccccHHH-HHHH----hcCCCCc-ccCCCcc
Confidence 433221 11111111 1110 001134566666655555555543322 2223 3344444 5888888
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCC
Q 007555 296 VLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDA 375 (598)
Q Consensus 296 ~l~~id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~ 375 (598)
..-..+.+..+++|.+.|.+-...|-..+...+..-....++.+ ++.+|-..+...++++.+ ...+.. .+..
T Consensus 159 ~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f----~~~~r~~~~~~~~~~~~~---~~~~~~-~~~~ 230 (498)
T COG3104 159 LFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIF----LLGRRHVKGIGGVPDPNP---LSFNFL-LPVL 230 (498)
T ss_pred EEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH----HHccchhcCCCCCCCccc---hhhhhh-hhhH
Confidence 88888889999999999999998885544443322222222222 223322111110010000 000000 0000
Q ss_pred ccch-------------hhhHHHHH------HHHHH---HhcCCc----hHHH------HHHHHHHHHhhhhhhHHHHHH
Q 007555 376 DNIV-------------DVGIEAIK------LGWKE---YMQQPV----LPAS------LAYVLLCLNVVLTPGSLMTAF 423 (598)
Q Consensus 376 ~~~~-------------~~~~~~i~------eG~~~---~~~~pv----ll~~------l~~~lL~~~vll~f~~l~~~y 423 (598)
.... .+.++.+. -...| .++++. -++. +..+.+|.....-.++....|
T Consensus 231 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~ 310 (498)
T COG3104 231 GGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLY 310 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 0000 00000000 00100 111111 1111 222233333212222344445
Q ss_pred HHh---cC-C-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------hhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007555 424 LTQ---RG-L-NPSIIGGFSGLCASMGVAATFLSAYLVRRLG--------ILKAGAAGLIFQASLLAMAVAVYWSGSLSQ 490 (598)
Q Consensus 424 l~~---lg-~-s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg--------~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~ 490 (598)
..+ ++ + -+---+++++..++.-++.+-+..++-.+++ +.|.++.........+.+.....+.+.++.
T Consensus 311 a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~ 390 (498)
T COG3104 311 ADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSG 390 (498)
T ss_pred HHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 542 23 1 1123467788888887776655555544422 123222111111122222222233332222
Q ss_pred chhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhh------hccCcchhHHHH
Q 007555 491 QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAI------IANDVSHFGFLA 563 (598)
Q Consensus 491 ~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i------~~~~~~~f~~l~ 563 (598)
..+.+......++..+|=-+.|....++.-+..|+.+.+.++|.-..-+.... +.+.+.+. ......+-....
T Consensus 391 ~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~ 470 (498)
T COG3104 391 LVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFG 470 (498)
T ss_pred CcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHH
Confidence 23333333344444455556688888999999999999999998775544443 22233221 223334444556
Q ss_pred HHHHHHHHHHHHHHH
Q 007555 564 TLSLLSVVGAAWMFC 578 (598)
Q Consensus 564 l~S~~~V~~a~~l~~ 578 (598)
.+++..+..+.+++.
T Consensus 471 ~~g~v~i~~~~~~~~ 485 (498)
T COG3104 471 TIGVVAIVIGILLLL 485 (498)
T ss_pred HHHHHHHHHHHHHHH
Confidence 677777777777665
No 137
>PRK03699 putative transporter; Provisional
Probab=97.79 E-value=0.0024 Score=68.75 Aligned_cols=129 Identities=13% Similarity=0.057 Sum_probs=78.5
Q ss_pred hhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhH
Q 007555 415 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 494 (598)
Q Consensus 415 ~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~ 494 (598)
.++.+++.+..+.|+++.++|.+.+...++..+|.+..+++.+|+|..+...++...... .........+ ...
T Consensus 25 ~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i---~~~l~~~~~~----~~~ 97 (394)
T PRK03699 25 VTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMIL---AVAGLMFSHS----LAL 97 (394)
T ss_pred HHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH---HHHHHHHcch----HHH
Confidence 455566666667899999999999999999999999999999999988776554322111 1111111111 111
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhh
Q 007555 495 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAII 552 (598)
Q Consensus 495 ~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~ 552 (598)
+.....+.+++.-........++.+..|+++||+..+...+...... ..+...+.+
T Consensus 98 --~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 98 --FSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred --HHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111122222222233456677788899999999987765554432 344444443
No 138
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.77 E-value=0.0016 Score=68.93 Aligned_cols=128 Identities=9% Similarity=0.003 Sum_probs=82.6
Q ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHH
Q 007555 418 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 497 (598)
Q Consensus 418 ~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~ 497 (598)
...+.+..+.|+++.++|++.+...++..++....+++.+|+|..+...++...... .........+ ...+
T Consensus 33 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~---~~~~~~~~~~------~~~l 103 (405)
T TIGR00891 33 LVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSA---GTLACGFAPG------YITM 103 (405)
T ss_pred HHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH---HHHHHHHhcc------HHHH
Confidence 344445557899999999999999999999999999999999987766544321111 1111111111 1112
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhcc
Q 007555 498 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAN 554 (598)
Q Consensus 498 ~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~ 554 (598)
..+.++.+++...++....+++-+..|+++||+.++...+...... +.+.+.+.+..
T Consensus 104 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~ 161 (405)
T TIGR00891 104 FIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP 161 (405)
T ss_pred HHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222333344445566777888899999999999999887766654 33444444433
No 139
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.76 E-value=0.0022 Score=69.84 Aligned_cols=120 Identities=12% Similarity=0.060 Sum_probs=77.1
Q ss_pred HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHH
Q 007555 425 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS 504 (598)
Q Consensus 425 ~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~ls 504 (598)
.+.|+++.++|++.++..++..++.+..+++.+|+|..+....++..... .........+ ... +..+-++.
T Consensus 36 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~---~~~~~~~~~~----~~~--l~~~r~l~ 106 (412)
T TIGR02332 36 KDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI---ASTATMFATG----PES--LYLLRILV 106 (412)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH---HHHHHHHhcC----HHH--HHHHHHHH
Confidence 46899999999999999999999999999999999998776544322111 1111111111 111 11112222
Q ss_pred hhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHH-HHHhhhhc
Q 007555 505 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV-MLGVAIIA 553 (598)
Q Consensus 505 r~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll-~~~~~i~~ 553 (598)
+++.-.+-.....+.++..|+++||++.++..+.......+ +.+.+.+.
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 107 GIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333344566678999999999999999998776665433 34434443
No 140
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.74 E-value=0.0025 Score=65.51 Aligned_cols=130 Identities=17% Similarity=0.120 Sum_probs=89.1
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 495 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~ 495 (598)
.....+.|.++.|.++.+.|...+...++.+++....+++.+|+|..+....+...... ..+...... ...
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~---~~~~~~~~~------~~~ 88 (352)
T cd06174 18 LSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFAL---GSLLLAFAS------SLW 88 (352)
T ss_pred hHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHH---HHHHHHHhc------cHH
Confidence 44556667778899999999999999999999999999999999987765544332211 111111111 112
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhhhcc
Q 007555 496 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAIIAN 554 (598)
Q Consensus 496 ~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i~~~ 554 (598)
.+..+..+.+++..........+..+..|+++|+++++............+ .+.+.+.+
T Consensus 89 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (352)
T cd06174 89 LLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE 148 (352)
T ss_pred HHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 222233344455556678888999999999999999999988887775444 33344443
No 141
>PRK10504 putative transporter; Provisional
Probab=97.72 E-value=0.003 Score=69.43 Aligned_cols=131 Identities=12% Similarity=-0.010 Sum_probs=84.2
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 495 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~ 495 (598)
+...++.|..+.|.++...|++.+...++..++....+++.+|+|..|....+......+. +......+ ...
T Consensus 29 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~---~~~~~~~~----~~~- 100 (471)
T PRK10504 29 VNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS---LFCALSGT----LNE- 100 (471)
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH---HHHHHhCC----HHH-
Confidence 4445666777899999999999999999989999999999999998777654432211111 11111111 111
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccC
Q 007555 496 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAND 555 (598)
Q Consensus 496 ~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~ 555 (598)
+..+.++.++|...+-.....+.++..|+++||+..|..+...+... ..+.+.+.+...
T Consensus 101 -l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~ 160 (471)
T PRK10504 101 -LLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY 160 (471)
T ss_pred -HHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Confidence 11122233334334444567788899999999999999987776664 344444555443
No 142
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.72 E-value=0.00067 Score=59.99 Aligned_cols=110 Identities=19% Similarity=0.105 Sum_probs=70.0
Q ss_pred HHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhh
Q 007555 192 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 271 (598)
Q Consensus 192 ~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~ 271 (598)
.+..++.+++.|.+.||++||+.++.+.....+. .. .... .. + .+.+++..++.+.......+....
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~----~~--~~~~-~~----~--~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLS----TA--MFAL-SS----N--ITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHH----HH--HHHH-hc----c--HHHHHHHHHHHHHHHHHHHHhHHH
Confidence 4556788999999999999999887665432221 11 1111 11 1 123344444555544444443332
Q ss_pred hccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchh
Q 007555 272 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPV 322 (598)
Q Consensus 272 aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~ 322 (598)
.+ .| ..++ ++..++++..+....+...+||.++|.+....+..
T Consensus 75 ~~-~~----~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 117 (141)
T TIGR00880 75 LI-AD----IYPP---EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWR 117 (141)
T ss_pred HH-HH----HCCh---hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchH
Confidence 22 22 4443 36889999999999999999999999998876643
No 143
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.71 E-value=0.0037 Score=68.22 Aligned_cols=123 Identities=12% Similarity=0.080 Sum_probs=86.3
Q ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHH
Q 007555 418 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 497 (598)
Q Consensus 418 ~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~ 497 (598)
.+.+.+..+.|+++.+.|++.+...++.++++...+++.+|+|..+....+.... ..+...+..... ......+
T Consensus 24 ~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~----~~g~~l~~~~~~--~~~~~~~ 97 (410)
T TIGR00885 24 PMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLY----ALGAFLFWPAAE--IMNYTLF 97 (410)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH----HHHHHHHHHHHh--hccHHHH
Confidence 3444444468999999999999999999999999999999999887776654322 112111111100 0122333
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH
Q 007555 498 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 546 (598)
Q Consensus 498 ~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~ 546 (598)
+.+.++.++|.-..+...+.+.++..|+++++|..+..++.+++...++
T Consensus 98 l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g 146 (410)
T TIGR00885 98 LVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIG 146 (410)
T ss_pred HHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHH
Confidence 3344556667778888899999999999999999999888877775333
No 144
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.71 E-value=0.002 Score=72.88 Aligned_cols=173 Identities=11% Similarity=0.059 Sum_probs=106.9
Q ss_pred hcCCchHHHHHHHHHHHHhhhhhhHHHHH-HHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 007555 394 MQQPVLPASLAYVLLCLNVVLTPGSLMTA-FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQ 472 (598)
Q Consensus 394 ~~~pvll~~l~~~lL~~~vll~f~~l~~~-yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q 472 (598)
+|||.|+......++. ++-..+..+... |..++.-|+..+|++..+..+-.++-++.+|.+..|+...|..++.-.++
T Consensus 7 lr~~~Fr~lw~a~~iS-~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~ 85 (524)
T PF05977_consen 7 LRNRNFRRLWIAQLIS-NLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLR 85 (524)
T ss_pred ccCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Confidence 5778887644333322 211122233333 44566778999999999999999999999999999999888877654433
Q ss_pred HHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHH-Hhhh
Q 007555 473 ASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML-GVAI 551 (598)
Q Consensus 473 ~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~-~~~i 551 (598)
..+........+.+.. ..+.++...++..++...++...++++.+.||+|++.+.++......++...++. +.|+
T Consensus 86 ~~~~~~L~~l~~~~~~----~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~ 161 (524)
T PF05977_consen 86 ALVALLLAVLAFFGLL----SPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGI 161 (524)
T ss_pred HHHHHHHHHHHHhCcC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHH
Confidence 2211111111222321 1222222334444556678899999999999999999999999988888865554 4455
Q ss_pred hccCcchhHHHHHHHHHHHH
Q 007555 552 IANDVSHFGFLATLSLLSVV 571 (598)
Q Consensus 552 ~~~~~~~f~~l~l~S~~~V~ 571 (598)
+....+.-....+-++..+.
T Consensus 162 Lva~~G~~~~f~inalsfl~ 181 (524)
T PF05977_consen 162 LVAFFGAAAAFLINALSFLI 181 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55444433334443443333
No 145
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.67 E-value=0.0016 Score=71.29 Aligned_cols=126 Identities=13% Similarity=0.021 Sum_probs=75.8
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHH
Q 007555 420 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 499 (598)
Q Consensus 420 ~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~ 499 (598)
..+++.+.|+++.++|+..++..++..++....+++.+|+|..+....+........ ......... ......+..
T Consensus 49 ~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~l~~ 123 (438)
T TIGR00712 49 AMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVM---LLMGFVPWA--TSSIAIMFV 123 (438)
T ss_pred hhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHH---HHHhccccc--cchHHHHHH
Confidence 344666779999999999999999999999999999999998765544332211111 111110000 001111111
Q ss_pred HHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhh
Q 007555 500 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVA 550 (598)
Q Consensus 500 ~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~ 550 (598)
...+.+++.-.........+.+..|+++||+.+|+.++...... +.+.+.+
T Consensus 124 ~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~ 175 (438)
T TIGR00712 124 LLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVL 175 (438)
T ss_pred HHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHH
Confidence 12222222222233455666788999999999999988877664 3334433
No 146
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.67 E-value=0.0023 Score=69.89 Aligned_cols=159 Identities=11% Similarity=0.014 Sum_probs=98.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------hhHHHHHHHHHHHHHHHcccccceeeccCCchHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPS--------LLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYI 216 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S--------~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi 216 (598)
|++.|..+....++..........=.|.++.+...+ .-.+++...+..+..++...++|.+.||++||++++
T Consensus 206 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~ 285 (418)
T TIGR00889 206 KNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVML 285 (418)
T ss_pred cCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 667787787777776555444444446666554323 245566667777788888899999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHH
Q 007555 217 CLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAV 296 (598)
Q Consensus 217 ~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~ 296 (598)
.+-++..+. .. .+... .. .....+.+++..++.+....+..+.....+ .+ ..++ ++..++.+.
T Consensus 286 ~~~~~~~v~----~~--l~~~~-~~--~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i-~~----~~p~---~~~g~~~g~ 348 (418)
T TIGR00889 286 LSLVAWALR----FG--FFAYG-DP--EYFGYALLFLSMIVYGCAFDFFNISGSVFV-EK----EVPV---HIRASAQGL 348 (418)
T ss_pred HHHHHHHHH----HH--HHHHc-Cc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HH----HCCH---HHHHHHHHH
Confidence 775432211 11 11111 10 010112334444555555555554443322 23 3443 378899999
Q ss_pred HH-HHHHHHHHhhHHHHHHHHhhhc
Q 007555 297 LN-RIDLLCEIAGASLFGILLSKYE 320 (598)
Q Consensus 297 l~-~id~~~~i~GP~lgGlL~s~~~ 320 (598)
.+ ....+..++||.++|.++...+
T Consensus 349 ~~~~~~~lg~~iGp~l~G~l~~~~g 373 (418)
T TIGR00889 349 FTLMCNGFGSLLGYILSGVMVEKMF 373 (418)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 97 5678899999999999998754
No 147
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.67 E-value=0.0021 Score=69.70 Aligned_cols=77 Identities=14% Similarity=0.094 Sum_probs=60.5
Q ss_pred HHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 007555 392 EYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG 468 (598)
Q Consensus 392 ~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~ 468 (598)
+++++|.+.......++++.....+.+.++.|+.+ .|+++.++|++.+..+++..++....+++.+|+|..|...++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~ 82 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWI 82 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 46788877765544444443323456778888886 899999999999999999999999999999999988776543
No 148
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.66 E-value=0.0042 Score=73.04 Aligned_cols=115 Identities=13% Similarity=-0.039 Sum_probs=77.1
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHH
Q 007555 420 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 499 (598)
Q Consensus 420 ~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~ 499 (598)
++.+..+.|+++...|++.++..+|.++|+++.+++..|+|..+..++++....+ .++......+ ...++.
T Consensus 190 lp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i---~~ll~afa~s------~~~llv 260 (742)
T TIGR01299 190 LPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGF---FAFFSSFVQG------YGFFLF 260 (742)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH---HHHHHHHHhh------HHHHHH
Confidence 3333346899999999999999999999999999999999988776655432211 1111111111 111222
Q ss_pred HHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH
Q 007555 500 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 543 (598)
Q Consensus 500 ~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ 543 (598)
+-++.++|..........++-|..|++.||++.+...+...+..
T Consensus 261 ~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ 304 (742)
T TIGR01299 261 CRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGG 304 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 22333344444456778899999999999999998877665543
No 149
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.64 E-value=0.0039 Score=67.15 Aligned_cols=127 Identities=20% Similarity=0.117 Sum_probs=78.7
Q ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHH
Q 007555 419 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 498 (598)
Q Consensus 419 l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~ 498 (598)
.++.+..+.|.++.++|+..+...++..++.+..+++.+|+|..|....+......+ ........+ ... +.
T Consensus 35 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~---~~~~~~~~~----~~~--l~ 105 (406)
T PRK15402 35 GMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILT---CLAILLAQS----IEQ--FT 105 (406)
T ss_pred chHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH---HHHHHHHcc----HHH--HH
Confidence 344455678999999999999999999999999999999999887766543221111 111111111 111 11
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHH-HHHHhhhhcc
Q 007555 499 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES-VMLGVAIIAN 554 (598)
Q Consensus 499 ~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~l-l~~~~~i~~~ 554 (598)
..-.+.+++...........+++..|+++++|.++........... .+.+.+.+.+
T Consensus 106 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 162 (406)
T PRK15402 106 LLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH 162 (406)
T ss_pred HHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122222222233455677888999999999999988776655533 3333344433
No 150
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.60 E-value=0.0012 Score=69.29 Aligned_cols=156 Identities=14% Similarity=0.129 Sum_probs=94.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHH
Q 007555 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQ 226 (598)
Q Consensus 148 ~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v 226 (598)
.+.......++...+......-+|.|.....+ +....+.......+..++..++.|.+.||++||+.++..-.+....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~- 298 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALL- 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH-
Confidence 36666667777777777777778888877777 7777888877788888999999999999999999776443321111
Q ss_pred HHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHH-HHHHHHHH
Q 007555 227 LLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVL-NRIDLLCE 305 (598)
Q Consensus 227 ~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l-~~id~~~~ 305 (598)
.... ..... .. .. .+..++..++.+.......+..+..+ .| +.+++ +..++++.. .....+..
T Consensus 299 --~~~~-~~~~~-~~--~~--~~~~~~~~~~~g~~~~~~~~~~~~~~-~~----~~p~~---~~~~~~~~~~~~~~~~g~ 362 (394)
T TIGR00883 299 --AVPL-LMALL-DS--GS--FTLFFFLVLGLALIGGMYTGPMGSFL-PE----LFPTE---VRYTGASLAYNLAGAIFG 362 (394)
T ss_pred --HHHH-HHHHh-cC--Cc--hHHHHHHHHHHHHHHHHHhhhHHHHH-HH----hCCcc---ceeeEeeehhHhHHHHHh
Confidence 1111 11111 11 11 12222333334443333333333222 23 45542 445666653 34455678
Q ss_pred HhhHHHHHHHHhhhc
Q 007555 306 IAGASLFGILLSKYE 320 (598)
Q Consensus 306 i~GP~lgGlL~s~~~ 320 (598)
.+||.++|.++...|
T Consensus 363 ~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 363 GFAPYIAAALVAMTG 377 (394)
T ss_pred hHHHHHHHHHHHHcC
Confidence 899999999998777
No 151
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.60 E-value=0.0056 Score=66.02 Aligned_cols=129 Identities=12% Similarity=0.080 Sum_probs=83.3
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 495 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~ 495 (598)
++..++....+.|.+..++|+..+...++..++....+++.+|+|..+....+......... ...+. .+ ...+
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~--~~~~a-~~----~~~l 100 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGAL--MRELY-PQ----SALL 100 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHH--HHHHC-cc----hHHH
Confidence 34455555567899999999999999999999999999999999998887766543211111 11111 11 1122
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhcc
Q 007555 496 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAN 554 (598)
Q Consensus 496 ~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~ 554 (598)
+.+-++.++|.-........++++..| ++||++++...+...... ..+.+...+.+
T Consensus 101 --l~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~ 157 (393)
T PRK09705 101 --LSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQ 157 (393)
T ss_pred --HHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222333444444556677778888776 789999999887655543 33344444433
No 152
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.59 E-value=0.0037 Score=66.98 Aligned_cols=163 Identities=13% Similarity=0.061 Sum_probs=95.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHH-HcccccceeeccCCchHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILI-VGGPLVGKLMDHSPRIPAYICLNTVQ 222 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~l-L~gp~aGvlvDR~~Rr~vmi~~d~~q 222 (598)
|++.++.+....++...++....--.+.|+.+. + |...+++.......... +...++|.++||++|||+++.+-++.
T Consensus 206 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~ 284 (390)
T TIGR02718 206 RRPLAWSLLALALLSAMTAVSGFGLSKLYLVDA-GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLA 284 (390)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhc-CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 556677777777888777766666667788774 6 88888887766554444 44678999999999999887654432
Q ss_pred HHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHH
Q 007555 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (598)
Q Consensus 223 ~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~ 302 (598)
... ... .+.......... .+.++....+.+....+..++....+.+ .++++ ++-.+..+..+.+..
T Consensus 285 ~~~----~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~--~~~g~~~~~~~~~~~ 350 (390)
T TIGR02718 285 GSL----ALL-WFAQAAFWLAPG--IAVAWSCSAFGSLITGITSVAIYTAFMR-----FAGDG--DQAGTDVTAVQSTRD 350 (390)
T ss_pred HHH----HHH-HHHHHHcccCCc--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCcc--cchHHHHHHHHHHHH
Confidence 211 111 111111000001 1111222222122222222222222222 12221 245677888888889
Q ss_pred HHHHhhHHHHHHHHhhhchh
Q 007555 303 LCEIAGASLFGILLSKYEPV 322 (598)
Q Consensus 303 ~~~i~GP~lgGlL~s~~~~~ 322 (598)
+...+||.++|.++...|..
T Consensus 351 lg~~~g~~~~G~l~~~~G~~ 370 (390)
T TIGR02718 351 LGELIASSIAGYLTDRFGYA 370 (390)
T ss_pred HHHHHHHHHHHHHHHHHccH
Confidence 99999999999999987743
No 153
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.58 E-value=0.0058 Score=65.79 Aligned_cols=154 Identities=14% Similarity=-0.044 Sum_probs=85.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHH
Q 007555 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (598)
Q Consensus 147 r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~ 225 (598)
++...+....++.......+..-.|.|+.+..+ +....+.+.....+..++..++.|.+.||++||+++...-+.-
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~--- 292 (393)
T PRK15011 216 RDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAG--- 292 (393)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHH---
Confidence 333444344444444455566668888877667 7777777665555666777899999999999999776443211
Q ss_pred HHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHH
Q 007555 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (598)
Q Consensus 226 v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~ 305 (598)
++.+. .... .. + .+.+.+..++.++...+....... ...| +.++ +..++++..+....+..
T Consensus 293 -~~~~~--~~~~-~~----~--~~~~l~~~~l~~~~~g~~~~~~~~-~~~~----~~p~----~~g~~~~~~~~~~~lg~ 353 (393)
T PRK15011 293 -VCFYA--GMLM-AH----S--PAILLGLQLLNAIYIGILGGIGML-YFQD----LMPG----QAGSATTLYTNTSRVGW 353 (393)
T ss_pred -HHHHH--HHHH-Hh----h--HHHHHHHHHHHHHHHHHHHHHHHH-HHHH----hCCC----CcchHHHHHHHHHHHHH
Confidence 11111 1111 11 1 111222222111111111111111 1123 3332 34578888888888899
Q ss_pred HhhHHHHHHHHhhhchh
Q 007555 306 IAGASLFGILLSKYEPV 322 (598)
Q Consensus 306 i~GP~lgGlL~s~~~~~ 322 (598)
.+||.++|.+....+..
T Consensus 354 ~~g~~l~G~i~~~~g~~ 370 (393)
T PRK15011 354 IIAGSLAGIVAEIWNYH 370 (393)
T ss_pred HHHHHHHHHHHHHhhhH
Confidence 99999999999876643
No 154
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.57 E-value=0.0063 Score=65.14 Aligned_cols=127 Identities=6% Similarity=-0.005 Sum_probs=77.4
Q ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHH
Q 007555 419 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 498 (598)
Q Consensus 419 l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~ 498 (598)
.++.+.++.|+++.++|++.+...++.+++....+++.+|+|..+....+.... ..+........ .... +.
T Consensus 30 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~----~~~~~~~~~~~---~~~~--l~ 100 (394)
T PRK11652 30 AIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF----ILGTLVALFAH---SLTV--LI 100 (394)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH----HHHHHHHHHHc---cHHH--HH
Confidence 344556678999999999999999999999999999999999877665443221 11111111111 1111 11
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhhhcc
Q 007555 499 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAIIAN 554 (598)
Q Consensus 499 ~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i~~~ 554 (598)
..-++.+++..........+..+..|++++++.++..+........++ .+.+.+.+
T Consensus 101 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 157 (394)
T PRK11652 101 AASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT 157 (394)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 112222222223344555666777888999999888776666554333 33344433
No 155
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.57 E-value=0.0053 Score=65.78 Aligned_cols=155 Identities=6% Similarity=-0.063 Sum_probs=100.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
+++.++.+....++..++......-.|.|+.+...|....+.+..+..+..++...+.|.+.||+++|+++..+-++..+
T Consensus 203 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 203 KEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVV 282 (382)
T ss_pred cChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 67778888777777777766566666778765333887888888888888888999999999999999998766443211
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHH-HH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID-LL 303 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id-~~ 303 (598)
. .+.... . ++ .+.+++..++.+....++.+....-+.+ . + +++..++.+.....+ ..
T Consensus 283 ~------~~~~~~-~----~~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~-----~-~---~~~~~~~~~~~~~~~~~~ 340 (382)
T PRK11128 283 R------WGLMGS-T----TA--LPWLIVIQILHCGTFTVCHLAAMRYIAA-----R-P---GSEVIRLQALYSALAMGG 340 (382)
T ss_pred H------HHHHHh-h----hh--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----C-C---HhhhHHHHHHHHHHHHHH
Confidence 1 111111 1 11 1334444555666556555555433322 2 2 224566677665443 44
Q ss_pred HHHhhHHHHHHHHhhhch
Q 007555 304 CEIAGASLFGILLSKYEP 321 (598)
Q Consensus 304 ~~i~GP~lgGlL~s~~~~ 321 (598)
...+||.++|.++..+|.
T Consensus 341 g~~ig~~i~G~l~~~~g~ 358 (382)
T PRK11128 341 SIAIMTVLSGFLYQHLGA 358 (382)
T ss_pred HHHHHHHHHHHHHHhccH
Confidence 568999999999998774
No 156
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.56 E-value=0.005 Score=67.96 Aligned_cols=126 Identities=13% Similarity=0.009 Sum_probs=82.2
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHH
Q 007555 420 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 499 (598)
Q Consensus 420 ~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~ 499 (598)
.+.+..+.|+++.+.|.+.+...++..++.+..+++.+|+|..+....+..... ...+......+ .. .+..
T Consensus 43 ~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~---~~~~~~~~~~~----~~--~l~~ 113 (496)
T PRK03893 43 LTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS---VGTLACGFAPG----YW--TLFI 113 (496)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH---HHHHHHHHHhH----HH--HHHH
Confidence 333445689999999999999999999999999999999998776654432211 11111111111 11 1122
Q ss_pred HHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhhhcc
Q 007555 500 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAIIAN 554 (598)
Q Consensus 500 ~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i~~~ 554 (598)
+.++.+++..........++++..|+++||+.++...+..++...++ .+.+.+.+
T Consensus 114 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 169 (496)
T PRK03893 114 ARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP 169 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22233334445567778899999999999999999988777665333 34454444
No 157
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.52 E-value=0.21 Score=54.78 Aligned_cols=309 Identities=12% Similarity=0.050 Sum_probs=145.8
Q ss_pred cccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccc
Q 007555 198 GGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDW 277 (598)
Q Consensus 198 ~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdw 277 (598)
+-.+++-+.|..+.|++++..-+...+ .-.++++.. + ...+-+.-+.-|.. .-+.+++-. |
T Consensus 57 ~l~~vflltd~l~Ykpviil~~~~~i~----t~~lll~~~-------s--v~~mq~~q~~yg~~-~a~evay~s-----Y 117 (412)
T PF01770_consen 57 FLLPVFLLTDYLRYKPVIILQALSYII----TWLLLLFGT-------S--VLAMQLMQFFYGLA-TAAEVAYYS-----Y 117 (412)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHH----HHHHHHHHC-------c--HHHHHHHHHHHHHH-HHHHHHHHH-----H
Confidence 344566678999999998865433211 222223321 1 12223333322221 112333322 2
Q ss_pred eeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cccc
Q 007555 278 AVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSG-VLDR 356 (598)
Q Consensus 278 vp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~-~l~~ 356 (598)
+=..+++ ++-+|+-+..|..-++++.+|-++|=++++..+..- .-.+.. .+.+....++..+++.+..+. ..++
T Consensus 118 iys~v~~---~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy-~~L~~i-sl~~~~~a~~~~~fLP~~~~S~~f~r 192 (412)
T PF01770_consen 118 IYSVVDK---EHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSY-FQLNYI-SLASVSLALLIALFLPMPKRSLFFHR 192 (412)
T ss_pred heeecCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH-HHHHHH-HHHHHHHHHHHHHHcCCCCcccceec
Confidence 2235554 489999999999999999999999999998654321 112111 111111112111233322100 0111
Q ss_pred cccc-------c-cccCCCCC------CCCCCCccchhhhHHHHHHHHHHHhcCCch-HHHHHHHHHHHHhhhhhhHHHH
Q 007555 357 AKCS-------Q-SCCRTSNE------GPVPDADNIVDVGIEAIKLGWKEYMQQPVL-PASLAYVLLCLNVVLTPGSLMT 421 (598)
Q Consensus 357 ~~~~-------~-~~~~~~~~------~~~~~~~~~~~~~~~~i~eG~~~~~~~pvl-l~~l~~~lL~~~vll~f~~l~~ 421 (598)
.++. + +..++.++ .+.+.......+.++.+...++.-+++|.+ +.++-.++... ...+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atc-----gy~qv~ 267 (412)
T PF01770_consen 193 KPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATC-----GYYQVI 267 (412)
T ss_pred cCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHh-----HHHHHH
Confidence 1100 0 00000000 000111122344556666666667777765 44554433211 111222
Q ss_pred HHHH----h---cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhH
Q 007555 422 AFLT----Q---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 494 (598)
Q Consensus 422 ~yl~----~---lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~ 494 (598)
.|.. + .+-....-|.+.++..+.|-++++..+.+..+.....-..++.. .+..+..++..+... .+
T Consensus 268 nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~----S~l~a~~L~lm~~t~---~I 340 (412)
T PF01770_consen 268 NYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVF----SLLQAGLLFLMSFTG---NI 340 (412)
T ss_pred HHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHH----HHHHHHHHHHHHHhh---HH
Confidence 2322 1 23345567999999999999999999998655543221111111 111122222211110 11
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH
Q 007555 495 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 542 (598)
Q Consensus 495 ~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~ 542 (598)
++...+-++.+..-.......+.-+-+...+|.-|-|+|+...++...
T Consensus 341 wv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~L 388 (412)
T PF01770_consen 341 WVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVL 388 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHH
Confidence 111112222221111223334456777888999999999988777666
No 158
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.52 E-value=0.0045 Score=75.71 Aligned_cols=119 Identities=8% Similarity=0.037 Sum_probs=79.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhh
Q 007555 430 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 509 (598)
Q Consensus 430 s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~ 509 (598)
+...+|++.++..++.++++..+|++..|+|..+...++.....+...+........+ +..++.+.++.+++..
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~ 118 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGW------FWLAFAVTFLLGAQSA 118 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHHHHH
Confidence 3455789899999999999999999999999888776655433222222111111111 2222223333444555
Q ss_pred hhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHh-hhhcc
Q 007555 510 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV-AIIAN 554 (598)
Q Consensus 510 ~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~-~i~~~ 554 (598)
.+......++.+.+|+++||+++|...+..++...++..+ +.+..
T Consensus 119 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 119 IYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred hhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677888899999999999999999999888776554444 44443
No 159
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.52 E-value=0.0058 Score=65.96 Aligned_cols=110 Identities=7% Similarity=-0.086 Sum_probs=74.1
Q ss_pred HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHH
Q 007555 425 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS 504 (598)
Q Consensus 425 ~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~ls 504 (598)
.+.|.++.+.|+..++..++.++|....+++.+|+|..+...++........ ....... ....+..+-.+.
T Consensus 46 ~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~---~~~~~~~------~~~~l~~~r~l~ 116 (426)
T PRK12307 46 ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGT---GLSGLAS------GVIMLTLSRFIV 116 (426)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH---HHHHHHh------HHHHHHHHHHHH
Confidence 4689999999999999999999999999999999998777665543221111 1111111 111122222233
Q ss_pred hhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH
Q 007555 505 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 543 (598)
Q Consensus 505 r~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ 543 (598)
++|..........++.+..|+++|||.++...+...+..
T Consensus 117 G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 155 (426)
T PRK12307 117 GMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGN 155 (426)
T ss_pred HHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHH
Confidence 334334566778889999999999999998776655554
No 160
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.51 E-value=0.0067 Score=65.55 Aligned_cols=122 Identities=11% Similarity=-0.054 Sum_probs=85.4
Q ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHH
Q 007555 421 TAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCL 500 (598)
Q Consensus 421 ~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~ 500 (598)
+.+..+.|.++..+|++.++..++..++...++++.+|+|..|...++....... ++......+ ..+ .
T Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~---~~~~~~~~~-----~~~----~ 94 (393)
T PRK11195 27 IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLG---CLLMLFGIH-----PLL----A 94 (393)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHH---HHHHHHHHH-----HHH----H
Confidence 3445678889999999999999999999999999999999988877665433221 111111111 111 1
Q ss_pred HHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHH-HHHHhhhhcc
Q 007555 501 IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES-VMLGVAIIAN 554 (598)
Q Consensus 501 i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~l-l~~~~~i~~~ 554 (598)
-++.+++...+....++++-+.+|+++|+|++|...+..+.... ++.+.|++.+
T Consensus 95 r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 95 YGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11223444567788899999999999999999999988887754 4444465554
No 161
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.51 E-value=0.0057 Score=63.69 Aligned_cols=117 Identities=14% Similarity=-0.040 Sum_probs=71.0
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 495 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~ 495 (598)
++.+.+.+..+.|+++.++|+..++..++..++....+++.+|+|..+....+...... ..+......+ ..
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~---~~~~~~~~~~------~~ 92 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL---GFTFYAIADS------LA 92 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH---HHHHHHHHHH------HH
Confidence 34455555557899999999999999999999999999999999987766544322111 1111111111 11
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH
Q 007555 496 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 542 (598)
Q Consensus 496 ~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~ 542 (598)
.+..+-.+.+++............++..| ++||+..+...+.....
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 138 (377)
T TIGR00890 93 ALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLG 138 (377)
T ss_pred HHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchh
Confidence 11111112222222222344455666666 56999999988776554
No 162
>PRK11043 putative transporter; Provisional
Probab=97.51 E-value=0.0095 Score=63.92 Aligned_cols=123 Identities=20% Similarity=0.164 Sum_probs=77.1
Q ss_pred HHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHH
Q 007555 423 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIV 502 (598)
Q Consensus 423 yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~ 502 (598)
+..+.|.++.+.|+..++..++..++.+..+++.+|+|..+....+..... ..........+ ... +..+..
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~---~~~~~~~~~~~----~~~--l~~~~~ 102 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFA---LGSLGMLWVES----AAQ--LLVLRF 102 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHH---HHHHHHHHhcC----HHH--HHHHHH
Confidence 345689999999999999999999999999999999998877654432211 11111111111 111 111222
Q ss_pred HHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhcc
Q 007555 503 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAN 554 (598)
Q Consensus 503 lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~ 554 (598)
+.++|.........++..+..|+++++++++...+...... ..+.+.+.+.+
T Consensus 103 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 155 (401)
T PRK11043 103 VQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN 155 (401)
T ss_pred HHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22333323345566778889999999999988876665543 34444454443
No 163
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.49 E-value=0.0064 Score=65.49 Aligned_cols=138 Identities=14% Similarity=0.019 Sum_probs=83.1
Q ss_pred hhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhH
Q 007555 415 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 494 (598)
Q Consensus 415 ~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~ 494 (598)
.++..++.+.++.|+++.++|++.+...++..++.+..+++.+|+|..+.....+.+ ...+........ ..
T Consensus 9 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~----~~~~~~~~~~~~-----~~ 79 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLAT----FAAAAGRLLDPF-----NY 79 (368)
T ss_pred HHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHH----HHHHHHHHHHhc-----cH
Confidence 345566667678899999999999999999999999999999999965443322111 111111111110 11
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHh-hhhccCcchhHHHHHH
Q 007555 495 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV-AIIANDVSHFGFLATL 565 (598)
Q Consensus 495 ~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~-~i~~~~~~~f~~l~l~ 565 (598)
..++.+-++.++|...+ ........+..|+++|||..++..+-..+...++... ..+.+ +++|-...
T Consensus 80 ~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~---~~gWr~~f 147 (368)
T TIGR00903 80 EWLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT---AGGLQLLI 147 (368)
T ss_pred HHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccchHHHH
Confidence 12222222223333322 3445556889999999999999887776665444433 44433 34555433
No 164
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.47 E-value=0.0094 Score=64.30 Aligned_cols=77 Identities=16% Similarity=0.044 Sum_probs=52.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHH-HHHHHHHcccccceeeccCCchHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFF-SKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~-~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~ 221 (598)
+|+.++.+...-++-..+......-.+.++.+..+ +...++++... ..+..++.++.+|.+.||++||+.++.+-++
T Consensus 207 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~ 285 (402)
T PRK11902 207 SRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVL 285 (402)
T ss_pred hCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 67778877777677666655443222334455566 88878877543 4456778889999999999999987655443
No 165
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.46 E-value=0.0095 Score=63.63 Aligned_cols=128 Identities=13% Similarity=0.033 Sum_probs=77.0
Q ss_pred hhHHHHHHHHhcCCChhH-----HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH-hhcccc
Q 007555 416 PGSLMTAFLTQRGLNPSI-----IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVY-WSGSLS 489 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~-----iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~-~~g~~~ 489 (598)
....++.|.++.|+++.+ .|.+.++..+++.++....+++.+|+|..+....+..... .+.... ...+
T Consensus 33 ~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~----~~~~~~~~~~~-- 106 (408)
T PRK09874 33 VMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG----IVMVLMGLAQN-- 106 (408)
T ss_pred hhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH----HHHHHHHHHhh--
Confidence 344667777788887543 5899999999999999999999999998776554332211 111111 1111
Q ss_pred cchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHH-HHHhhhhcc
Q 007555 490 QQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV-MLGVAIIAN 554 (598)
Q Consensus 490 ~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll-~~~~~i~~~ 554 (598)
...+.. ..++.+++.. +......+..+.+|+++||+.+|...+.......+ +.+.+.+..
T Consensus 107 --~~~~~~--~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 167 (408)
T PRK09874 107 --IWQFLI--LRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD 167 (408)
T ss_pred --HHHHHH--HHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 1111112211 22345667888899999999999988776665433 344454443
No 166
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.44 E-value=0.018 Score=64.32 Aligned_cols=127 Identities=13% Similarity=-0.009 Sum_probs=77.9
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHH
Q 007555 420 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 499 (598)
Q Consensus 420 ~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~ 499 (598)
++.+..+.|.++.+++++.++..++..++....+++.+|+|..+....+....... .+......+ ... ++.
T Consensus 29 ~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~---~~~~~~a~~----~~~--li~ 99 (495)
T PRK14995 29 APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLA---SLAAAFSPT----ASW--LIA 99 (495)
T ss_pred HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH---HHHHHHcCC----HHH--HHH
Confidence 34455578999999999999999998888899999999999988776554322111 111111111 111 111
Q ss_pred HHHHHhhhhhhhhhhhhh-hhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccC
Q 007555 500 LIVLSRLGHMSYDIVGAQ-ILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAND 555 (598)
Q Consensus 500 ~i~lsr~Gl~~fdl~~~~-l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~ 555 (598)
+-++.++|.-.+...... +.+...|+++|||.+|+..+...+.. .++.+.+.+.+.
T Consensus 100 ~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 100 TRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 212222222222233333 44666788999999999988887775 444545666554
No 167
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.43 E-value=0.0084 Score=65.95 Aligned_cols=118 Identities=11% Similarity=-0.007 Sum_probs=71.8
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHH
Q 007555 420 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 499 (598)
Q Consensus 420 ~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~ 499 (598)
..+|+.+.|+++.++|++.+...++..++....+++.+|+|..+...++...... ............ .....+..
T Consensus 51 ~~p~l~~~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i---~~~~~~~~~~~~--~~~~~~~~ 125 (452)
T PRK11273 51 AMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAA---VMLFMGFVPWAT--SSIAVMFV 125 (452)
T ss_pred hhHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHH---HHHHHHhhhccc--ccHHHHHH
Confidence 3445654599999999999999999999999999999999998766554322111 111111110000 01111111
Q ss_pred HHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH
Q 007555 500 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 542 (598)
Q Consensus 500 ~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~ 542 (598)
+..+.+++.............+..|+++||+..|+.++.....
T Consensus 126 ~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 168 (452)
T PRK11273 126 LLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVG 168 (452)
T ss_pred HHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhh
Confidence 1122222222233345566778899999999999977666554
No 168
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.42 E-value=0.013 Score=61.37 Aligned_cols=120 Identities=12% Similarity=0.116 Sum_probs=75.2
Q ss_pred hhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchh
Q 007555 415 TPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP 493 (598)
Q Consensus 415 ~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~ 493 (598)
.+.++.+.++. +.|+++.+.|++.+...++..++.+..+++.+|+|..+...++...... .......... ...
T Consensus 19 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i---~~~~~~~~~~---~~~ 92 (366)
T TIGR00886 19 AFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAI---PCLWAGLAVQ---SYS 92 (366)
T ss_pred HhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH---HHHHHHHHhh---hHH
Confidence 34455554454 6899999999999999999999999999999999988776654332211 1111111110 011
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH
Q 007555 494 LLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 543 (598)
Q Consensus 494 ~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ 543 (598)
. +..+-++.+++...+ ...+.++-+..|+++||+.++...+..+...
T Consensus 93 ~--~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 139 (366)
T TIGR00886 93 V--LLLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGG 139 (366)
T ss_pred H--HHHHHHHHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHH
Confidence 1 111111122222223 3456778888999999999999886655553
No 169
>PRK10133 L-fucose transporter; Provisional
Probab=97.40 E-value=0.023 Score=62.62 Aligned_cols=125 Identities=13% Similarity=0.025 Sum_probs=81.0
Q ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHH
Q 007555 419 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 498 (598)
Q Consensus 419 l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~ 498 (598)
+++.+-.+.|+++.+.|+..+...++..++....+++.+|+|..+...+++........+... ....+ ....++
T Consensus 48 ~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~-~~~a~-----~~~~ll 121 (438)
T PRK10133 48 LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWP-AAEIM-----NYTLFL 121 (438)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-HHhcC-----CHHHHH
Confidence 344443468999999999999999999999999999999999988877655432221111100 01111 122333
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHh
Q 007555 499 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 549 (598)
Q Consensus 499 ~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~ 549 (598)
.+.++.++|.-..++..+.++.+..|++++++..+...+.......++.+.
T Consensus 122 ~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~ 172 (438)
T PRK10133 122 VGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVF 172 (438)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445556667788888888877677777667777666665554444333
No 170
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.39 E-value=0.01 Score=62.51 Aligned_cols=132 Identities=16% Similarity=0.041 Sum_probs=74.3
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHHHHHHHHH-HHhhcccc
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL-----GILKAGAAGLIFQASLLAMAVA-VYWSGSLS 489 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrl-----g~~r~g~~~l~~q~~~L~~~v~-~~~~g~~~ 489 (598)
.....+.+.++.|++.+++|+.... ++...+ .++.+++..|+ |..|..+. ..+......... .+....
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~--~~~~~~~~~~~~l~~~~~~-- 80 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLV--LTQVLLLSLLLILSFLVPS-- 80 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHH--HHHHHHHHHHHHHHcCCcc--
Confidence 3346677788899999999999655 333333 66777787776 54443221 112111111111 111110
Q ss_pred cchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHH-HHHHhhhhccC
Q 007555 490 QQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES-VMLGVAIIAND 555 (598)
Q Consensus 490 ~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~l-l~~~~~i~~~~ 555 (598)
... ..++...+. ..++....|++..+++-|.+|+++||+++|...+-.....+ .+.+.+.+.+.
T Consensus 81 ~~l-~~l~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 145 (356)
T TIGR00901 81 TDL-PLLAGLAFL-IAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP 145 (356)
T ss_pred hhH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 111 111111111 12334466899999999999999999999998876666654 33444444333
No 171
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.36 E-value=0.0077 Score=64.74 Aligned_cols=116 Identities=13% Similarity=0.059 Sum_probs=76.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhh
Q 007555 429 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH 508 (598)
Q Consensus 429 ~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl 508 (598)
.+..++|++.++..++..++....+++.+|+|..+....+...... ........... .....++.+-.+.++|.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~r~l~G~~~ 141 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVI---GAILMGLAAFA---LSVEMLIVGRVLLGIGV 141 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHH---HHHHHHHhccc---cchHHHHHHHHHHHhhh
Confidence 4489999999999999999999999999999987766544332111 11111111111 11112222333344444
Q ss_pred hhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHhh
Q 007555 509 MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 550 (598)
Q Consensus 509 ~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~~ 550 (598)
-.+......++.+..|+++||+.++..++.......++..++
T Consensus 142 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 142 GIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred hHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 456677788999999999999999998877766655555544
No 172
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.36 E-value=0.0025 Score=56.23 Aligned_cols=107 Identities=15% Similarity=0.044 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhh
Q 007555 439 GLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQI 518 (598)
Q Consensus 439 g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l 518 (598)
...+++.+++....+++.+|+|..+....+...... .........+ ...+.....+..++....+.....+
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~ 75 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVL---STAMFALSSN------ITVLIIARFLQGFGAAFALVAGAAL 75 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHH---HHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 345677888899999999999887765543322111 1111111111 1111112222333334456677888
Q ss_pred hhccCCCccchhHHHHHHHHHHHHHH-HHHHhhhhcc
Q 007555 519 LQTGIPSSKANLIGTTEISVASLVES-VMLGVAIIAN 554 (598)
Q Consensus 519 ~Q~~VP~~~rGRV~sv~~sl~~~~~l-l~~~~~i~~~ 554 (598)
.++..|+++||++++..++....... .+.+.+.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 76 IADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred HHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc
Confidence 99999999999999999988888753 4444455543
No 173
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.34 E-value=0.0035 Score=69.22 Aligned_cols=123 Identities=12% Similarity=0.004 Sum_probs=77.4
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH-HHHHHHHHHHHhhcccccchhH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQ-ASLLAMAVAVYWSGSLSQQNPL 494 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q-~~~L~~~v~~~~~g~~~~~~~~ 494 (598)
++..++.+..+.|+++.++|++.++..++..++....+++.+|+|..+....++... ..++..+.. ..+.. . ..
T Consensus 48 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~-~--~~ 122 (467)
T PRK09556 48 FKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGAS--LGSGS-V--SL 122 (467)
T ss_pred hhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHH--Hhccc-c--hH
Confidence 444455555678999999999999999999999999999999999887765443221 111122211 11100 0 11
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH
Q 007555 495 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 543 (598)
Q Consensus 495 ~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ 543 (598)
..+...-++.+++..........++-+..|+++||+.+|+..+..+...
T Consensus 123 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~ 171 (467)
T PRK09556 123 GLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGG 171 (467)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhh
Confidence 1122222222233223335666789999999999999998877555553
No 174
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.32 E-value=0.019 Score=61.61 Aligned_cols=154 Identities=10% Similarity=-0.071 Sum_probs=101.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~ 223 (598)
|+|+++.+....++-..+...+.--.|.|+.+ .+ |....+..-....+..++..+..|.+.||+++|++++.+-+...
T Consensus 203 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~ 281 (382)
T TIGR00902 203 KNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACV 281 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHH
Confidence 77889888888888888877777777888876 56 98888988888899999999999999999999998875543321
Q ss_pred HHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHH-HHHH
Q 007555 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLN-RIDL 302 (598)
Q Consensus 224 ~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~-~id~ 302 (598)
+. .+.+.. . ++ .+.+++..++-++...++.++...-+. + . ++ ++..++=+... ....
T Consensus 282 ~~------~~~~~~-~----~~--~~~~~~~q~l~g~~~~~~~~~~~~~i~-~----~-~~---~~~~~~q~~~~~~~~g 339 (382)
T TIGR00902 282 GR------WAIIGA-I----EA--FPLIFLLQILHCGTFAVCHLAAMRYIA-A----Q-PG---SEIAKLQALYNALAMG 339 (382)
T ss_pred HH------HHHHHh-H----hh--HHHHHHHHHHHHHHHHHHHHHHHHHHH-h----C-CH---hhHHHHHHHHHHHHHH
Confidence 11 111111 1 11 234455555566555555555433222 1 2 22 13333333333 2345
Q ss_pred HHHHhhHHHHHHHHhhhch
Q 007555 303 LCEIAGASLFGILLSKYEP 321 (598)
Q Consensus 303 ~~~i~GP~lgGlL~s~~~~ 321 (598)
+...+||.++|.++...|.
T Consensus 340 ~g~~~g~~~~G~l~~~~g~ 358 (382)
T TIGR00902 340 GLIAIFTAFAGFIYPTLGA 358 (382)
T ss_pred HHHHHHHHHHHHHHHhccH
Confidence 7788999999999998875
No 175
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.29 E-value=0.015 Score=64.89 Aligned_cols=130 Identities=12% Similarity=0.011 Sum_probs=79.8
Q ss_pred hhHHHHHHHHh---cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 007555 416 PGSLMTAFLTQ---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQ 491 (598)
Q Consensus 416 f~~l~~~yl~~---lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rr-lg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~ 491 (598)
..+.++.|+.+ +|+++.+.|.+.+..++++.++.+..+++..| +|..|+..++..... .+...+.... .
T Consensus 29 ~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~----~g~~~~~~~~---~ 101 (475)
T TIGR00924 29 MQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLM----LGHFMLAMSI---Y 101 (475)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHH----HHHHHHHhcc---c
Confidence 44567778874 79999999999999999999999999999988 899888776543221 1111111111 1
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCc---cchhHHHHHHHHHHHHHH-HHHHhhhhcc
Q 007555 492 NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS---KANLIGTTEISVASLVES-VMLGVAIIAN 554 (598)
Q Consensus 492 ~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~---~rGRV~sv~~sl~~~~~l-l~~~~~i~~~ 554 (598)
... +..+..+.++|.-.+..+...+.=+..|++ .|++.++...+..+.... .+.+.+.+.+
T Consensus 102 ~~~--~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~ 166 (475)
T TIGR00924 102 PDL--IFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE 166 (475)
T ss_pred HhH--HHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 111 111222233343344444455544445544 488899988877777653 4444465544
No 176
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.27 E-value=0.013 Score=61.81 Aligned_cols=117 Identities=18% Similarity=0.230 Sum_probs=75.3
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 495 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~ 495 (598)
++..++.+..+.|+++.++|+..+...++..++.+..+++.+|+|..+...++.... ..+.......+ ...
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~----~~~~~~~~~~~----~~~- 89 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLI----AAGILIRSAPG----TAL- 89 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHH----HHHHHHHHhcc----HHH-
Confidence 445666677789999999999999999999999999999999999888766554321 11111111111 111
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH
Q 007555 496 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 543 (598)
Q Consensus 496 ~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ 543 (598)
+....++..+|....+.....+..+..| ++||+.++...+.+....
T Consensus 90 -l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 135 (355)
T TIGR00896 90 -LFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGA 135 (355)
T ss_pred -HHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHH
Confidence 1112222223333334445555666665 589999999887776654
No 177
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.26 E-value=0.0028 Score=68.52 Aligned_cols=159 Identities=15% Similarity=0.057 Sum_probs=98.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~ 224 (598)
++|.|+.+....++..++...+..-.+.|.....++....+.+.....++.++..++.|.++||++||+++..+-++..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 220 KNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVL 299 (437)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 67888888888888888877765555555544445555666676777888999999999999999999988766443221
Q ss_pred HHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCC----chhHHHHHHHHHHHH
Q 007555 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGIN----RPIALAKANAVLNRI 300 (598)
Q Consensus 225 ~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~----~~~~L~~aNa~l~~i 300 (598)
.... .+ . .. .. .+.+++..++.+.......+.... +-.| +++.+ .+++-..+++..+..
T Consensus 300 ----~~~~-~~-~-~~---~~--~~~~~~~~~~~g~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~G~~~~~~~~~ 362 (437)
T TIGR00792 300 ----GYLI-FF-F-AG---SN--LPLILVLIILAGFGQNFVTGLVWA-LVAD----TVDYGEWKTGVRAEGLVYSVRTFV 362 (437)
T ss_pred ----HHHH-HH-H-cc---hh--HHHHHHHHHHHHHHHHHHHHHHHH-HHhh----hhhhhhhhcCccchHHHHHHHHHH
Confidence 1111 11 1 11 01 122233333333333322222222 2223 33211 012456788999999
Q ss_pred HHHHHHhhHHHHHHHHhhhc
Q 007555 301 DLLCEIAGASLFGILLSKYE 320 (598)
Q Consensus 301 d~~~~i~GP~lgGlL~s~~~ 320 (598)
+.++..+||.++|.+++..|
T Consensus 363 ~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 363 RKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999987655
No 178
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.26 E-value=0.026 Score=62.80 Aligned_cols=114 Identities=12% Similarity=0.038 Sum_probs=69.7
Q ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHH
Q 007555 419 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 498 (598)
Q Consensus 419 l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~ 498 (598)
.++.+..+.|++..++|.+.+...++.++|.++.+++.+|+|..+....+...... . .+...+..+ ...+...
T Consensus 58 ~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~--~-~~~~~~~~s----~~~l~~~ 130 (476)
T PLN00028 58 LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP--A-VFCMSLVSS----ATGFIAV 130 (476)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH--H-HHHHHHhcC----HHHHHHH
Confidence 33444456899999999999999999999999999999999987765543322111 1 111111111 1111111
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH
Q 007555 499 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 542 (598)
Q Consensus 499 ~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~ 542 (598)
-++.+++...+ .+...++-+..|+++||+++|+.++..+..
T Consensus 131 --r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g 171 (476)
T PLN00028 131 --RFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLG 171 (476)
T ss_pred --HHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHH
Confidence 11112222222 234456778899999999999988765544
No 179
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.17 E-value=0.038 Score=61.68 Aligned_cols=160 Identities=14% Similarity=0.115 Sum_probs=99.4
Q ss_pred HHHHHHHH-hcCCChhH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH-HHHHHHHHHHHHHhhcccccchhH
Q 007555 418 SLMTAFLT-QRGLNPSI-IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI-FQASLLAMAVAVYWSGSLSQQNPL 494 (598)
Q Consensus 418 ~l~~~yl~-~lg~s~~~-iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~-~q~~~L~~~v~~~~~g~~~~~~~~ 494 (598)
++..+|+. +.|+++.+ +|.+.++...+=.+.-+..+++..|+|..+...++.. +....+..+.+ . ++
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa----~------Sl 115 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG----T------SV 115 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH----H------HH
Confidence 35555665 68999999 9999999999999999999999999998876655432 22222222211 1 11
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhh-hccCcchhHHHHHHHHHHHHH
Q 007555 495 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAI-IANDVSHFGFLATLSLLSVVG 572 (598)
Q Consensus 495 ~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i-~~~~~~~f~~l~l~S~~~V~~ 572 (598)
..+...-++.+++-- .......++-..+|+++|||++|..++-..+...++ .+.+. ..-.-..+..+-.+|.+.+..
T Consensus 116 ~~L~i~R~llGvaEA-~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~ 194 (511)
T TIGR00806 116 WHMQLMEVFYSVTMA-ARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTF 194 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Confidence 111111111111111 123788899999999999999999988877764333 22222 222344566667788888877
Q ss_pred HHHHHHHHhcCCcccCCccc
Q 007555 573 AAWMFCHWLLNPTDEQRSLF 592 (598)
Q Consensus 573 a~~l~~~~l~~~~~~~~~l~ 592 (598)
+...-+ .+.++ +|++|
T Consensus 195 a~~~a~-~LP~~---~~sl~ 210 (511)
T TIGR00806 195 SVFLAL-FLKRP---KRSLF 210 (511)
T ss_pred HHHHHH-hCCCC---chhhh
Confidence 644433 22344 55554
No 180
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.16 E-value=0.0046 Score=67.45 Aligned_cols=78 Identities=18% Similarity=0.130 Sum_probs=70.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q 222 (598)
+||.|+.++..+++..++..+..-..+.|.....++.-..+.+.....++.++..|+.+.++||++|||++..+-++.
T Consensus 223 ~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~ 300 (428)
T PF13347_consen 223 RNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLA 300 (428)
T ss_pred ccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHH
Confidence 789999999999999999999998899999888885577788888999999999999999999999999998776543
No 181
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.16 E-value=0.027 Score=63.02 Aligned_cols=164 Identities=13% Similarity=0.047 Sum_probs=88.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHH-HHHHHHHHHcccccceeeccCCchHHHHHHHHHHH
Q 007555 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMG-FFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (598)
Q Consensus 146 ~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~-~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~ 223 (598)
++.++.+....++-.+++.....-.+-|+.+..+ |...++.+. ....+..++.++.+|.++||++|||.++..-+++.
T Consensus 221 ~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~ 300 (491)
T PRK11010 221 RNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQG 300 (491)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4445555555566666766655445556655667 988888886 56667889999999999999999887665443333
Q ss_pred HHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHH
Q 007555 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (598)
Q Consensus 224 ~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~ 303 (598)
+. ... .+...... .+ .+.+++..++......+...+. .+.-.+ +++++ .-.+.=+..+....+
T Consensus 301 l~----~l~-~~~l~~~~--~~--~~~l~~~~~l~~~~~g~~~~~~-~a~~~~----l~~~~---~~~t~~gl~~s~~~l 363 (491)
T PRK11010 301 VS----NAG-YWLLSITD--KN--LYSMGAAVFFENLCGGMGTAAF-VALLMT----LCNKS---FSATQFALLSALSAV 363 (491)
T ss_pred HH----HHH-HHHHHhcc--cc--HHHHHHHHHHHHHHHHHHHHHH-HHHHHH----HcCCC---CcHHHHHHHHHHHHH
Confidence 22 111 11111110 11 1122222222111111122222 112122 33332 112333455555677
Q ss_pred HHHhhHHHHHHHHhhhchhHHHH
Q 007555 304 CEIAGASLFGILLSKYEPVTCLK 326 (598)
Q Consensus 304 ~~i~GP~lgGlL~s~~~~~~~l~ 326 (598)
..+++|.++|.++...|......
T Consensus 364 g~~~~~~~~G~l~~~~G~~~~f~ 386 (491)
T PRK11010 364 GRVYVGPVAGWFVEAHGWPTFYL 386 (491)
T ss_pred HHHHHHHHHHHHHHHhChHHHHH
Confidence 77777778999988777544333
No 182
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.11 E-value=0.038 Score=61.70 Aligned_cols=118 Identities=14% Similarity=0.012 Sum_probs=75.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhh
Q 007555 428 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG 507 (598)
Q Consensus 428 g~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~G 507 (598)
..++...|.+.+...+|.++|.+..+++.+|+|..+...++.....+. ..................+..+-++.+++
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~---~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 128 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIA---TVASGLSPGSSPKSVMATLCFWRFWLGVG 128 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH---HHHHHHccCcccchHHHHHHHHHHHHHHH
Confidence 455667899999999999999999999999999877765543322111 11111111100001122333333344445
Q ss_pred hhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHH
Q 007555 508 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLG 548 (598)
Q Consensus 508 l~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~ 548 (598)
.-........+.+|..|+++||+..++......+...++..
T Consensus 129 ~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~ 169 (502)
T TIGR00887 129 IGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAI 169 (502)
T ss_pred HhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 55556778899999999999999999988776665444433
No 183
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.11 E-value=0.036 Score=60.39 Aligned_cols=120 Identities=16% Similarity=0.088 Sum_probs=75.3
Q ss_pred HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHH
Q 007555 425 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS 504 (598)
Q Consensus 425 ~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~ls 504 (598)
.+.|.+....+...++..++..+|.+..+++.+|+|..+...++...... ..+......+ ... ++.+-++.
T Consensus 44 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~---~~~~~~~a~~----~~~--l~~~r~l~ 114 (413)
T PRK15403 44 RDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL---ACAATLFTTS----MTQ--FLIARFIQ 114 (413)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH---HHHHHHHcCC----HHH--HHHHHHHH
Confidence 45799999999999999999999999999999999988876654332111 1111111111 111 11111122
Q ss_pred hhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHh-hhhc
Q 007555 505 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV-AIIA 553 (598)
Q Consensus 505 r~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~-~i~~ 553 (598)
+++..........+.++..|+++++|..+...+.......++..+ +.+.
T Consensus 115 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~ 164 (413)
T PRK15403 115 GTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM 164 (413)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222212233445678889999999999999888877776444444 4443
No 184
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.08 E-value=0.0091 Score=65.66 Aligned_cols=121 Identities=10% Similarity=0.060 Sum_probs=77.8
Q ss_pred hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHh
Q 007555 426 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR 505 (598)
Q Consensus 426 ~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr 505 (598)
+.++++.+.|.+.++..++.+++.+..+++.+|+|..+....+...... ......+.... ....+...-++.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~---~~~~~~~~~~~----~~~~l~~~r~~~G 142 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSV---ISIVIPWAAGG----GIALVVFCRVIQG 142 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHH---HHHHHHHHHHc----CchHHHHHHHHHH
Confidence 4688999999999999999999999999999999987766544322111 11111010000 0111111222233
Q ss_pred hhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHH-HHHHhhhhc
Q 007555 506 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES-VMLGVAIIA 553 (598)
Q Consensus 506 ~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~l-l~~~~~i~~ 553 (598)
++..........++.+..|+++||+++|...+...+... .+.+.+.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~ 191 (465)
T TIGR00894 143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLC 191 (465)
T ss_pred HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455667788999999999999999999887666643 344445443
No 185
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.04 E-value=0.037 Score=60.67 Aligned_cols=122 Identities=10% Similarity=0.001 Sum_probs=75.7
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHHHHhhcc--cccchhHHHHHHHHHH
Q 007555 427 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLL-AMAVAVYWSGS--LSQQNPLLFFLCLIVL 503 (598)
Q Consensus 427 lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L-~~~v~~~~~g~--~~~~~~~~~~~~~i~l 503 (598)
.+.++.+.|++.+...+|..+|+++.+++.+|+|..+....+........ ..+...+.... .........++.+=++
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 48889999999999999999999999999999999887765543221111 11111000000 0011111222222223
Q ss_pred HhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHH
Q 007555 504 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLG 548 (598)
Q Consensus 504 sr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~ 548 (598)
.+++.-........++.|..|+++||+..+...........+..+
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~ 174 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYF 174 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 334444556677889999999999999999877654444433333
No 186
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.03 E-value=0.057 Score=60.52 Aligned_cols=170 Identities=13% Similarity=0.010 Sum_probs=112.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCch--HHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRI--PAYICLNTV 221 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr--~vmi~~d~~ 221 (598)
+.|+..++.++.++-.=|-....--..+|.....+ |.....++.++..+..++.+...|.+.||++-| ++++.+.++
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLIL 358 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 56778888899888776666666666778888888 999999999999999999999999999999877 666655443
Q ss_pred HHHHHHHHHHHH-HHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHH
Q 007555 222 QAAAQLLSAAMI-IHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI 300 (598)
Q Consensus 222 q~~~v~ls~~~l-~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~i 300 (598)
-.+. . ..+++ ++....+. .+ .+..+++.++.|....-.+...+. +.-.+.|++ +-.+.-+.-...
T Consensus 359 ~~~i-~-~~g~~G~~~~~~g~-~~---~~~f~~~a~~~G~~~G~~qs~sRs-----~~~~LiP~g---~e~efFgly~i~ 424 (477)
T PF11700_consen 359 WIII-P-LYGLFGFWPSFFGL-KS---PWEFWVLAVLIGLFMGGIQSASRS-----LFSRLIPPG---REAEFFGLYAIT 424 (477)
T ss_pred HHHH-H-HHHHHHhhhcccCc-cc---HHHHHHHHHHHHHHhhhHHHHHHH-----HHHHhCCCc---hhhHHHHHHHHH
Confidence 2111 0 00110 00001111 01 133444444444443333333332 233366764 568999999999
Q ss_pred HHHHHHhhHHHHHHHHhhhc-hhHHHHHH
Q 007555 301 DLLCEIAGASLFGILLSKYE-PVTCLKFA 328 (598)
Q Consensus 301 d~~~~i~GP~lgGlL~s~~~-~~~~l~~~ 328 (598)
+..+.++||.+.|++....| ...++...
T Consensus 425 gk~ss~lGPll~g~i~~~tg~~r~g~~~l 453 (477)
T PF11700_consen 425 GKASSWLGPLLFGLITDATGSQRYGFLFL 453 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 99999999999999999877 33444443
No 187
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.01 E-value=0.041 Score=67.69 Aligned_cols=118 Identities=8% Similarity=-0.014 Sum_probs=78.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhh
Q 007555 432 SIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSY 511 (598)
Q Consensus 432 ~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~f 511 (598)
..+++..++..+..++.+.++|++..|+|..+...+.......+...+...+...+ ++.++.+.++.+++...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s------~~~l~~~~~l~gi~~a~~ 125 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNS------VPLLFAALFLMGIHSALF 125 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHhh
Confidence 56788889999999999999999999999877543322222222222222222111 222222334444455567
Q ss_pred hhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhhhccC
Q 007555 512 DIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAIIAND 555 (598)
Q Consensus 512 dl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i~~~~ 555 (598)
.....+++-+.+|++++++.+|...+..++..+++ .+.|++...
T Consensus 126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~ 170 (1140)
T PRK06814 126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS 170 (1140)
T ss_pred chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78889999999999999999999999998886554 444665553
No 188
>PRK09669 putative symporter YagG; Provisional
Probab=96.98 E-value=0.0081 Score=65.83 Aligned_cols=161 Identities=11% Similarity=-0.008 Sum_probs=95.5
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHH
Q 007555 144 AHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (598)
Q Consensus 144 ~r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~ 223 (598)
.+|+.|+.+....++..++..+..-..+.|.....+..-..+.+.....++.++..++.|.++||++||+.++...++..
T Consensus 226 ~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~ 305 (444)
T PRK09669 226 LGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFV 305 (444)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 37888999999988888888766544443433344444444555566678888888999999999999998876643321
Q ss_pred HHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCch----hHHHHHHHHHHH
Q 007555 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRP----IALAKANAVLNR 299 (598)
Q Consensus 224 ~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~----~~L~~aNa~l~~ 299 (598)
+. ....+. ..+ ++ .+.+++..++.+.......+... ++-.| +++.++. ..-....+....
T Consensus 306 ~~-----~~~~~~--~~~--~~--~~~~~~~~~i~g~~~~~~~~~~~-am~ad----~~d~~e~~~G~r~~g~~~s~~~~ 369 (444)
T PRK09669 306 IL-----SALIFF--IPP--SN--VWLIFALNILFNFIQNLTTPLQW-SMFSD----VVDYEEKRSGRRLDGLVFSTNLF 369 (444)
T ss_pred HH-----HHHHHH--hCc--ch--HHHHHHHHHHHHHHHHHHHHHHH-HHHHh----hhhhhhhhcCcCcchHHHHHHHH
Confidence 11 111111 111 11 12233333444444444443332 23334 5442200 011234677777
Q ss_pred HHHHHHHhhHHHHHHHHhhhc
Q 007555 300 IDLLCEIAGASLFGILLSKYE 320 (598)
Q Consensus 300 id~~~~i~GP~lgGlL~s~~~ 320 (598)
.+.++..+||.++|.+++..|
T Consensus 370 ~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 370 AIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 788999999999999988765
No 189
>PRK09848 glucuronide transporter; Provisional
Probab=96.97 E-value=0.0081 Score=65.84 Aligned_cols=160 Identities=11% Similarity=0.025 Sum_probs=100.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~ 223 (598)
+||.|..+....++...+-..+....|.|.....+ +....+++.....+..++.+|+.|.+.||+++|++++.+-++..
T Consensus 226 ~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~ 305 (448)
T PRK09848 226 RNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGT 305 (448)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 78889999999988888887777777777766667 55554454554566778889999999999999998876654322
Q ss_pred HHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCc----hhHHHHHHHHHHH
Q 007555 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINR----PIALAKANAVLNR 299 (598)
Q Consensus 224 ~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~----~~~L~~aNa~l~~ 299 (598)
+ .+.+ .+ .. .. .+ .+.+++..++.+.......+... ++..| +++.++ +++-...++..+.
T Consensus 306 i----~~~~-~~-~~-~~--~~--~~~~~~~~~l~g~G~~~~~~~~~-al~~~----~~~~~~~~~g~r~~G~~~~~~~~ 369 (448)
T PRK09848 306 C----GYLL-FF-WV-SV--WS--LPVALVALAIASIGQGVTMTVMW-ALEAD----TVEYGEYLTGVRIEGLTYSLFSF 369 (448)
T ss_pred H----HHHH-HH-Hc-Cc--hh--HHHHHHHHHHHHHHHHHHHHHHH-HHHHH----hhhhhHHhhCccchhHHHHHHHH
Confidence 1 1212 11 11 11 11 12233333444444444443332 22233 443220 0123567888888
Q ss_pred HHHHHHHhhHHHHHHHHhhhc
Q 007555 300 IDLLCEIAGASLFGILLSKYE 320 (598)
Q Consensus 300 id~~~~i~GP~lgGlL~s~~~ 320 (598)
.+.++..+||.+.|.+++..|
T Consensus 370 ~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 370 TRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 888999999999999887654
No 190
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.96 E-value=0.99 Score=50.73 Aligned_cols=40 Identities=20% Similarity=0.195 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHH
Q 007555 183 PVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (598)
Q Consensus 183 ~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q 222 (598)
..+.+.....+...+.+++.|.++|+++||+.|+.+.+.-
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~ 129 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLF 129 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4478888889999999999999999999999999888653
No 191
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=96.91 E-value=0.11 Score=56.81 Aligned_cols=145 Identities=17% Similarity=0.132 Sum_probs=91.7
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 495 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~ 495 (598)
..++++....+.|.+....|...+..+.+..+|+.....+.+|+...+..++.+. ++..+-......+ .+.
T Consensus 32 ~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~----lFi~~n~l~alAp-----~f~ 102 (394)
T COG2814 32 PVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA----LFIVSNLLSALAP-----SFA 102 (394)
T ss_pred HHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH----HHHHHHHHHHHhc-----cHH
Confidence 4456777777899999999999999999999999999999999988776654322 1111111111110 122
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhhhccCcchhHHHHHHHHHHHHH
Q 007555 496 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAIIANDVSHFGFLATLSLLSVVG 572 (598)
Q Consensus 496 ~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i~~~~~~~f~~l~l~S~~~V~~ 572 (598)
+++.+=++..+.+-.|-.....+.=+.+|+++|||..++..+=.+++..++ .+.+.++ +.|+|-....+.++..
T Consensus 103 ~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig---~~~GWR~~F~~ia~l~ 177 (394)
T COG2814 103 VLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG---QLFGWRATFLAIAVLA 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH---HHhhHHHHHHHHHHHH
Confidence 233332223333445556677888899999999999999988777775333 3334443 3444544433333333
No 192
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=96.88 E-value=0.051 Score=58.35 Aligned_cols=54 Identities=15% Similarity=0.076 Sum_probs=46.4
Q ss_pred hhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 007555 415 TPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG 468 (598)
Q Consensus 415 ~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~ 468 (598)
.+.+.++.|+.+ .|+++.+.|++.+...++..++....+++.+|+|..+....+
T Consensus 20 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~ 74 (396)
T TIGR00882 20 AYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWI 74 (396)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 455677778875 799999999999999999999999999999999987776544
No 193
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=96.81 E-value=0.11 Score=56.74 Aligned_cols=117 Identities=9% Similarity=-0.026 Sum_probs=66.2
Q ss_pred CCChhH---HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhccccc--chhHHHHHHHHH
Q 007555 428 GLNPSI---IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQ--QNPLLFFLCLIV 502 (598)
Q Consensus 428 g~s~~~---iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~--~~~~~~~~~~i~ 502 (598)
+.++.. .+.+.+.+-++..+|+++.+++.+|+|..|...+++..... ..+......+... ......++.+=+
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~R~ 132 (432)
T PRK10406 56 GNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCF---GSLVIACLPGYETIGTWAPALLLLARL 132 (432)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH---HHHHHhhcCCchhHHHHHHHHHHHHHH
Confidence 344543 44555666677779999999999999998877665432211 1111111011000 011112222222
Q ss_pred HHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHH
Q 007555 503 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML 547 (598)
Q Consensus 503 lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~ 547 (598)
+.++|.-..-....+++-|..|+++||+..+...........++.
T Consensus 133 l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 133 FQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 333343344556778999999999999998887665554433333
No 194
>PRK09952 shikimate transporter; Provisional
Probab=96.79 E-value=0.11 Score=56.85 Aligned_cols=148 Identities=14% Similarity=0.017 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHH
Q 007555 155 CCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI 233 (598)
Q Consensus 155 gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l 233 (598)
..+...++-.....-.|.|+....+ +...+........+..++..+..|.+.||++|||+++.+-+...+ ....+
T Consensus 258 ~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~----~~~~~ 333 (438)
T PRK09952 258 LRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTL----SAFPF 333 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH----HHHHH
Confidence 3444444444444445556655556 655444455555566677788999999999999988765433211 11111
Q ss_pred HHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHH-HHHHHHhhHHHH
Q 007555 234 IHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI-DLLCEIAGASLF 312 (598)
Q Consensus 234 ~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~i-d~~~~i~GP~lg 312 (598)
....... +. .+.+++..++.+........... ++..| +.|.+ ....+++....+ ..+...++|.++
T Consensus 334 ~~~~~~~---~~--~~~~~~~~~l~~~~~~~~~~~~~-~~~~e----~~p~~---~r~tg~g~~~~~~~~lgg~~~p~i~ 400 (438)
T PRK09952 334 FMALEAQ---SI--FWIVFFSIMLANIAHDMVVCVQQ-PMFTE----MFGAS---YRYSGAGVGYQVASVVGGGFTPFIA 400 (438)
T ss_pred HHHHHcC---Ch--HHHHHHHHHHHHHHHHHHHHHHH-HHHHH----HCCcc---hhHHHHhHHHHHHHHHHHHHHHHHH
Confidence 1111110 11 11111122222222222122221 22223 55542 445567765444 346788999999
Q ss_pred HHHHhhh
Q 007555 313 GILLSKY 319 (598)
Q Consensus 313 GlL~s~~ 319 (598)
|.++...
T Consensus 401 g~l~~~~ 407 (438)
T PRK09952 401 AALVTYF 407 (438)
T ss_pred HHHHHhc
Confidence 9998744
No 195
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.75 E-value=0.16 Score=56.66 Aligned_cols=120 Identities=6% Similarity=-0.047 Sum_probs=72.2
Q ss_pred hhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhH
Q 007555 416 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 494 (598)
Q Consensus 416 f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~ 494 (598)
++.+.+.+.. +.|+++.++|++.++..+++-++-+..+++.+|+|..+...++..... +......+...+..+....
T Consensus 53 ~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~--i~~~~~~~a~~~~~~s~~~ 130 (462)
T PRK15034 53 FSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI--IPCVWLGIAVQNPNTPFGI 130 (462)
T ss_pred HHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH--HHHHHHHHHHcccCCCHHH
Confidence 3344444444 589999999999999998888888889999999999877665443211 1111111111100011112
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHH
Q 007555 495 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS 540 (598)
Q Consensus 495 ~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~ 540 (598)
++.+ -++.+++. ..-...+..+.+..|+++||+.+|+.....+
T Consensus 131 lli~--r~l~Gigg-~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~ 173 (462)
T PRK15034 131 FIVI--ALLCGFAG-ANFASSMGNISFFFPKAKQGSALGINGGLGN 173 (462)
T ss_pred HHHH--HHHHHHHH-HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHh
Confidence 2111 11222222 2335677788899999999999999864443
No 196
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.73 E-value=0.066 Score=59.99 Aligned_cols=162 Identities=10% Similarity=0.066 Sum_probs=98.7
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH----hhhhhHHHHHHHHHHHHHHHHHHHHH-hhccc--
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVR----RLGILKAGAAGLIFQASLLAMAVAVY-WSGSL-- 488 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~r----rlg~~r~g~~~l~~q~~~L~~~v~~~-~~g~~-- 488 (598)
..+.+++|+.++|+++...|.+..++.+.+++...+.+++.. |+|..|..+++.... ...+...+ +..+.
T Consensus 23 ~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~---~~~~l~ll~~~~~~~~ 99 (477)
T TIGR01301 23 QLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL---VAFAVILIGFAADIGH 99 (477)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH---HHHHHHHHHhCchhhh
Confidence 345677788889999999999999999999999999999987 588877655421111 11111111 11110
Q ss_pred ---------ccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccc--hhHHHHHHHHHHHHHHHHHHhhhhc----
Q 007555 489 ---------SQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKA--NLIGTTEISVASLVESVMLGVAIIA---- 553 (598)
Q Consensus 489 ---------~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~r--GRV~sv~~sl~~~~~ll~~~~~i~~---- 553 (598)
......+.++.++.+..++.-.+..+..+++=+.+|+++| ++.++.+.....+-..++++++-+.
T Consensus 100 ~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~ 179 (477)
T TIGR01301 100 LFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYK 179 (477)
T ss_pred hccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 0011122333333334444445566778899999999865 6888888777777666666665332
Q ss_pred --c---------CcchhHHHHHHHHHHHHHHHHHHHHH
Q 007555 554 --N---------DVSHFGFLATLSLLSVVGAAWMFCHW 580 (598)
Q Consensus 554 --~---------~~~~f~~l~l~S~~~V~~a~~l~~~~ 580 (598)
+ .+.++.+..+++...+......-+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~ 217 (477)
T TIGR01301 180 IFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSA 217 (477)
T ss_pred hcccccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence 1 12355666666555555544444333
No 197
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.71 E-value=1.5 Score=49.13 Aligned_cols=116 Identities=13% Similarity=0.018 Sum_probs=65.3
Q ss_pred ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHH
Q 007555 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAG 259 (598)
Q Consensus 180 S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg 259 (598)
+.....+...+..+-.++-+.+.|.+.||++||++++.+-+++.+...+. .+ .. + ++...+.=++.|
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~----a~--a~-----~--~~~~~~~Rfl~G 182 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT----AF--AP-----N--YWMFLIFRFLSG 182 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH----HH--hC-----c--HHHHHHHHHHHH
Confidence 44455555556666667777778999999999999999887655442111 11 11 1 122222222333
Q ss_pred HHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Q 007555 260 AVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS 317 (598)
Q Consensus 260 ~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s 317 (598)
....-....... .--| +++++ +...+-.. ...--...+.+|+.++.+..
T Consensus 183 ~~~~~~~~~~~~-~~~E----~~~~~---~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 183 FFGSGPLTVGFG-LVAE----IVSPK---QRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred hhccchhHHhHh-hhee----ecCcc---hhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 222211111111 1123 55543 55666666 66667778888888888887
No 198
>TIGR00898 2A0119 cation transport protein.
Probab=96.70 E-value=0.043 Score=60.90 Aligned_cols=117 Identities=19% Similarity=0.125 Sum_probs=76.5
Q ss_pred HhcCCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHH
Q 007555 425 TQRGLN---PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI 501 (598)
Q Consensus 425 ~~lg~s---~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i 501 (598)
.+.+++ +.+.|+..++..+|.++|+++.+++.+|+|..+...++.....+ .++......+ ...++..-
T Consensus 117 ~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i---~~~~~~~~~~------~~~~~~~r 187 (505)
T TIGR00898 117 TEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAV---SGVLTAFSPN------YTVFLVFR 187 (505)
T ss_pred EEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHH---HHHHHHHccc------HHHHHHHH
Confidence 356887 88999999999999999999999999999987766554332211 1111111111 12222223
Q ss_pred HHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHhh
Q 007555 502 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 550 (598)
Q Consensus 502 ~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~~ 550 (598)
++.+++..........++.|.+|+++||++.+.......+...+..+++
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 236 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVA 236 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444455677888999999999999999987555444444443333
No 199
>PTZ00207 hypothetical protein; Provisional
Probab=96.65 E-value=0.2 Score=57.61 Aligned_cols=122 Identities=12% Similarity=0.111 Sum_probs=72.6
Q ss_pred HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH-HHHHHHHHHhhcccccchhHHHHHHHHHH
Q 007555 425 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQAS-LLAMAVAVYWSGSLSQQNPLLFFLCLIVL 503 (598)
Q Consensus 425 ~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~-~L~~~v~~~~~g~~~~~~~~~~~~~~i~l 503 (598)
.+.|++..+++.+.+.+...|. +.+.++++..|+|+.+...++.....+ .+..+.. ..+.. ..+.+.+....++
T Consensus 55 ~~lgls~~~l~~i~svg~~~g~-~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala--~~~~i--~~s~~~l~l~r~l 129 (591)
T PTZ00207 55 ARYNLTQRDLSTITTVGIAVGY-FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALT--FQEVI--EGSVVRLSVYNGL 129 (591)
T ss_pred HHhCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH--hcccc--cCcHHHHHHHHHH
Confidence 3589999999998887665554 455679999999988776655432211 1111111 01100 0122222222333
Q ss_pred HhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHh-hhh
Q 007555 504 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGV-AII 552 (598)
Q Consensus 504 sr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~-~i~ 552 (598)
.++|...++........+..| ++||++.|+..+...+.. +.+.+. +++
T Consensus 130 ~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 130 MTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555567777777888876 678999999988877764 334333 444
No 200
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.63 E-value=0.14 Score=57.67 Aligned_cols=131 Identities=11% Similarity=0.097 Sum_probs=81.8
Q ss_pred hhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHHHHHhhcccccchh
Q 007555 416 PGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL-GILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP 493 (598)
Q Consensus 416 f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrl-g~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~ 493 (598)
....++.|+.+ +|+++...+.+.+...++..++.++.+++.+|+ |..|...++...... +......... ...
T Consensus 28 ~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l----g~lll~~~~~--~~~ 101 (493)
T PRK15462 28 MRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI----GHVVLGASEI--HPS 101 (493)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH----HHHHHHHhhc--chh
Confidence 44567778764 799999999999999999999999999999998 988877665443221 1111111100 011
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCc--cchhHHHHHHHHHHHHH-HHHHHhhhhcc
Q 007555 494 LLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS--KANLIGTTEISVASLVE-SVMLGVAIIAN 554 (598)
Q Consensus 494 ~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~--~rGRV~sv~~sl~~~~~-ll~~~~~i~~~ 554 (598)
.+......+. +|...+.....+++.+..|++ +|++.++...+..++.. ..+.+.+.+..
T Consensus 102 ~~~l~l~li~--iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~ 163 (493)
T PRK15462 102 FLYLSLAIIV--CGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE 163 (493)
T ss_pred HHHHHHHHHH--HhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111111111 233233344567778888875 79999999998888764 34444455543
No 201
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=96.54 E-value=0.14 Score=57.03 Aligned_cols=61 Identities=18% Similarity=0.046 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHH
Q 007555 159 GNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLN 219 (598)
Q Consensus 159 S~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d 219 (598)
..++......-+|.|+....+ +....+++.....+..++..+..|.+.||++||++++..-
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~ 323 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGS 323 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 334444455567777766666 6666666666666777788899999999999999877554
No 202
>PRK15075 citrate-proton symporter; Provisional
Probab=96.54 E-value=0.094 Score=57.28 Aligned_cols=54 Identities=17% Similarity=0.115 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHH
Q 007555 166 WNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLN 219 (598)
Q Consensus 166 ~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d 219 (598)
...-.|.|+.+..+ +....+.+.....+..++..+..|.+.||++||++++..-
T Consensus 257 ~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~ 311 (434)
T PRK15075 257 ITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFT 311 (434)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 33346777766667 7777777777777778888999999999999999877653
No 203
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=96.52 E-value=0.23 Score=55.75 Aligned_cols=132 Identities=14% Similarity=0.117 Sum_probs=71.3
Q ss_pred hhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchh
Q 007555 416 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP 493 (598)
Q Consensus 416 f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rr-lg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~ 493 (598)
....++.|+. ++|+++...+.+.+...........+.+++.+| +|..+...++..... .+........ ....
T Consensus 40 ~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~----ig~~l~~~~~--~~~~ 113 (500)
T PRK09584 40 LQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLA----IGYALVAWSG--HDAG 113 (500)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH----HHHHHHHHhc--ccHH
Confidence 4456777875 589999888777766554444445678999999 598777665543221 1111111110 0111
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCcc--chhHHHHHHHHHHHHH-HHHHHhhhhccC
Q 007555 494 LLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSK--ANLIGTTEISVASLVE-SVMLGVAIIAND 555 (598)
Q Consensus 494 ~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~--rGRV~sv~~sl~~~~~-ll~~~~~i~~~~ 555 (598)
.+. .+.++..+|.-.+.....+++.+..|++. +++.++...+..+... +.+.+.+.+.+.
T Consensus 114 ~l~--~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~ 176 (500)
T PRK09584 114 IVY--MGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK 176 (500)
T ss_pred HHH--HHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 11222223333344455677777777653 4557776666555554 344555666443
No 204
>PTZ00207 hypothetical protein; Provisional
Probab=96.48 E-value=2.3 Score=49.02 Aligned_cols=157 Identities=11% Similarity=-0.017 Sum_probs=90.4
Q ss_pred CCC-CCchhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHH
Q 007555 142 TPA-HPEGLYALYACCLAGNLVEQLWNFAW--PSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYIC 217 (598)
Q Consensus 142 ~~~-r~r~f~~L~~gq~lS~~G~~i~~fAl--pL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~ 217 (598)
.|. +.+.+..+.++-++...+...+.|.+ |- +....+ |...++....+. ...-.+.+++|.+.||++||+++..
T Consensus 19 ~~~~e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~-L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vlli 96 (591)
T PTZ00207 19 KPINEPRRFALLVLGAFCSICTSFMYAFNLISGA-MQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVL 96 (591)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 344 44556667777666666665555554 32 345556 777777766543 2334567788999999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHH
Q 007555 218 LNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVL 297 (598)
Q Consensus 218 ~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l 297 (598)
+-+.-.+. ..+ .+ +.... .-....+.+++..++.|..+..+.++....+. +|.| + +-.++.+..
T Consensus 97 g~ll~~iG----~ll-~a-la~~~-~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~-~~Fp----~----~RG~a~Gi~ 160 (591)
T PTZ00207 97 SMTVFCLG----TLL-FA-LTFQE-VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVL-SVFP----S----NRGAVVAIM 160 (591)
T ss_pred HHHHHHHH----HHH-HH-HHhcc-cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCh----h----hhHHHHHHH
Confidence 76543222 111 11 11100 00001244455555666666666665555443 3654 2 346788888
Q ss_pred HHHHHHHH-HhhHHHHHHHH
Q 007555 298 NRIDLLCE-IAGASLFGILL 316 (598)
Q Consensus 298 ~~id~~~~-i~GP~lgGlL~ 316 (598)
.....++. +++|+..+++.
T Consensus 161 ~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 161 KTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88777776 45666666554
No 205
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.48 E-value=0.11 Score=58.33 Aligned_cols=129 Identities=13% Similarity=0.040 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhh
Q 007555 434 IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDI 513 (598)
Q Consensus 434 iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl 513 (598)
.+.+.++..+||++|++..+.+.+|+|...........+.. .++....... ..+.-++..|=.+.++.......
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~---~~~~~~~s~~---~~~~e~li~GR~i~Gl~~gl~~~ 135 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVL---AALLMGLSKS---APSFEMLILGRLIVGLACGLSTG 135 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH---HHHHHHHHHH---hhhHHHHHHHHHHHHHHhHHHHH
Confidence 45556778899999999999999999987554433322211 1111111100 01122222232222222223455
Q ss_pred hhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHhh--hhccCcchhHHHHHHHHH
Q 007555 514 VGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA--IIANDVSHFGFLATLSLL 568 (598)
Q Consensus 514 ~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~~--i~~~~~~~f~~l~l~S~~ 568 (598)
...-++||.-|++.||.+.......-.+..++++..+ -++...+..+++.....+
T Consensus 136 ~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i 192 (485)
T KOG0569|consen 136 LVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLI 192 (485)
T ss_pred HHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHH
Confidence 6666799999999999999888877777767775554 344455555555444444
No 206
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=96.24 E-value=0.32 Score=54.56 Aligned_cols=132 Identities=16% Similarity=0.090 Sum_probs=77.6
Q ss_pred hhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchh
Q 007555 416 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP 493 (598)
Q Consensus 416 f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rr-lg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~ 493 (598)
..+.++.|+. ++|++....+.+.+.......+...+.+++.+| +|..|+..++.....+. .+........ ..
T Consensus 33 ~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g---~~~~~~~~~~---~~ 106 (489)
T PRK10207 33 VQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIG---YFMTGMSLLK---PD 106 (489)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHH---HHHHHHhccc---hh
Confidence 3456677876 489999888888877776666677789999998 99998887765432211 1111111111 11
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCc--cchhHHHHHHHHHHHHHHH-HHHhhhhccC
Q 007555 494 LLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS--KANLIGTTEISVASLVESV-MLGVAIIAND 555 (598)
Q Consensus 494 ~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~--~rGRV~sv~~sl~~~~~ll-~~~~~i~~~~ 555 (598)
. ++ .+.++..+|.-.+......++-+..|++ +|++.++......++...+ +.+.+.+...
T Consensus 107 l-l~-~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~ 169 (489)
T PRK10207 107 L-IF-IALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK 169 (489)
T ss_pred H-HH-HHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 11 1222233444344445566777777776 5577777777666666433 3444555443
No 207
>PRK10429 melibiose:sodium symporter; Provisional
Probab=96.01 E-value=0.21 Score=55.50 Aligned_cols=121 Identities=13% Similarity=0.126 Sum_probs=73.5
Q ss_pred HHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhHHH-HHHHHHHHHHHHHHHH-HHhhccccc
Q 007555 418 SLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRR----LGILKAG-AAGLIFQASLLAMAVA-VYWSGSLSQ 490 (598)
Q Consensus 418 ~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rr----lg~~r~g-~~~l~~q~~~L~~~v~-~~~~g~~~~ 490 (598)
..+..|.++ .|+++..+|.+..+..+...+...+.|.+..| +|..|-. +++.. ...++.. .+.....+.
T Consensus 27 ~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i----~~~i~~~llf~~p~~~~ 102 (473)
T PRK10429 27 MYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTL----ANSVVLFLLFSAHLFEG 102 (473)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhH----HHHHHHHHHHcCCCCCc
Confidence 344555554 79999999999999888887777777887774 4653322 22211 1122212 222211111
Q ss_pred chhHHHHHHHHHHHhhhhhhhhhhhhhhhhccC-CCccchhHHHHHHHHHHHH
Q 007555 491 QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVASLV 542 (598)
Q Consensus 491 ~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~V-P~~~rGRV~sv~~sl~~~~ 542 (598)
....+.++...++..++..++|++..++.=+.+ ++++|.++++..+...+..
T Consensus 103 ~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig 155 (473)
T PRK10429 103 TAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLA 155 (473)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 111222222333445666788999999999988 6899999999876666544
No 208
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.97 E-value=0.21 Score=51.86 Aligned_cols=60 Identities=13% Similarity=-0.038 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHH
Q 007555 156 CLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYI 216 (598)
Q Consensus 156 q~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi 216 (598)
..+-.-||+... -..-|+++.++ .--.++..-+++.-+.++||.++|.++|+.+||+.-+
T Consensus 46 yslmmAgDWLQg-PYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracv 106 (454)
T KOG4332|consen 46 YSLMMAGDWLQG-PYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV 106 (454)
T ss_pred HHHHHhhhhhcC-ceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhcccccee
Confidence 344455555432 11123455556 5667888888889999999999999999999999644
No 209
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.70 E-value=4.5 Score=44.95 Aligned_cols=285 Identities=12% Similarity=0.001 Sum_probs=134.0
Q ss_pred CCchhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLV--EQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G--~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q 222 (598)
.+|+...|.+=.+++.-+ .++..-++.=++-..++|.-..-....+..+-.+.++-++=.+.|++.=|......-+..
T Consensus 40 y~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln 119 (480)
T KOG2563|consen 40 YPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLN 119 (480)
T ss_pred chhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHH
Confidence 444444444444443333 333333333445555666666677777777788888889999999999888776655443
Q ss_pred HHHHHHHHHHHHHHhhhccCCccchHH-HHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHH
Q 007555 223 AAAQLLSAAMIIHAHTVIPTSSSMLLH-PWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (598)
Q Consensus 223 ~~~v~ls~~~l~~~~~~~~~~~~~l~~-~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id 301 (598)
.+...+.+.. ..-..+ ..... ....--.+.+..+.+....- .-+..-|-| + ++...||+.--..+
T Consensus 120 ~iGa~Ir~is--s~p~v~----~~f~~~l~~~Gq~iaa~Aq~Fim~lP-skiA~~WF~----~---~qra~A~~~~v~~n 185 (480)
T KOG2563|consen 120 GIGAWIRLIS--SLPFVP----PLFRRPLTHTGQSIAAAAQPFILGLP-SKIAAVWFP----P---DQRAIATVLGVMGN 185 (480)
T ss_pred HHHHHHhhhc--cCcccc----ccchhhhhHHhHHHHHHhhhHhhccc-cHHHHhhCC----c---chhhhhhhHHHhcc
Confidence 3321222110 000010 11111 11122223333333333220 011122543 2 26777887766555
Q ss_pred HHHHHhhHHHHHHHHhhh-c--hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCCCCccc
Q 007555 302 LLCEIAGASLFGILLSKY-E--PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNI 378 (598)
Q Consensus 302 ~~~~i~GP~lgGlL~s~~-~--~~~~l~~~~~~~~~S~~~~~l~~~li~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 378 (598)
++.-.+|-++.-++...- + ...+....+......+.+..+.+..+.+ ++ +++.++..+. .+
T Consensus 186 ~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~--~~---~P~tPps~s~----~~------- 249 (480)
T KOG2563|consen 186 PLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVF--TK---KPPTPPSASQ----AA------- 249 (480)
T ss_pred hHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc--CC---CCCCCCchhH----hh-------
Confidence 554444444444444322 0 1112221111111111111111112221 11 1111111000 00
Q ss_pred hhhhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHH---HhcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 007555 379 VDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL---TQRGLNPSIIGGFSGLCASMGVAATFLSAYL 455 (598)
Q Consensus 379 ~~~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl---~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l 455 (598)
.+ =.+..++.+-.++++-+...+....+.+ ..|.++.+..- .-.|++...-|..-..+.++|.+|+.+++.+
T Consensus 250 ~~--~~~f~~si~~~~~n~~F~il~~~ygi~~---g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii 324 (480)
T KOG2563|consen 250 LQ--DASFPKSIKSCFKNRQFIILAICYGIGL---GLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGII 324 (480)
T ss_pred hh--cCcHHHHHHHHHcCccHHHHHHHHhhhH---HHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhh
Confidence 00 0135667777888877654322222222 34555555543 2368877777888888889999999999999
Q ss_pred HHhhhhhHH
Q 007555 456 VRRLGILKA 464 (598)
Q Consensus 456 ~rrlg~~r~ 464 (598)
..|.+-.+.
T Consensus 325 ~Dktk~fk~ 333 (480)
T KOG2563|consen 325 ADKTKKFKL 333 (480)
T ss_pred hhhhhhHHH
Confidence 887765544
No 210
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=95.62 E-value=0.2 Score=54.94 Aligned_cols=183 Identities=15% Similarity=0.110 Sum_probs=107.1
Q ss_pred HHHHHHHHHhcCCchHHH-HHHHHHHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 007555 385 AIKLGWKEYMQQPVLPAS-LAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (598)
Q Consensus 385 ~i~eG~~~~~~~pvll~~-l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r 463 (598)
++.+-++.+ |-+++... +.++..|++= -.|+..++....+.|+|.+++|++.++..+.=-++=++.+.+..|.++.+
T Consensus 18 ~~~~~y~~~-r~qif~~~fiGYa~fYl~R-knF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~ 95 (448)
T COG2271 18 EIDKTYKRW-RIQIFLSIFIGYAAFYLTR-KNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY 95 (448)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce
Confidence 334444433 33344432 3345555543 35554455544456799999999999999988889999999999999876
Q ss_pred HHHHHHHHHHH-HHHHHHHHHhhcccccchhHHHHHHHHHHHhhhh-hhhhhhhhhhhhccCCCccchhHHHHHHHHHHH
Q 007555 464 AGAAGLIFQAS-LLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH-MSYDIVGAQILQTGIPSSKANLIGTTEISVASL 541 (598)
Q Consensus 464 ~g~~~l~~q~~-~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl-~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~ 541 (598)
....++....+ ++.++.. .++.++....++.++.= |. --+....+-..-|.++|||..|+-++-.+.
T Consensus 96 fm~~gLilsai~nil~Gfs----------~s~~~~~~l~~lng~fQg~G-wpp~~~~i~~Wfsr~eRG~~~siWn~shNi 164 (448)
T COG2271 96 FMAFGLILSAIVNILFGFS----------PSLFLFAVLWVLNGWFQGMG-WPPCARTITHWFSRKERGTWWSIWNTSHNI 164 (448)
T ss_pred eehHHHHHHHHHHHHHhhh----------hHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHcCccccCceEEEehhhhhc
Confidence 65555433221 1122211 12223332222222110 11 123445666788999999999998877776
Q ss_pred HH-HHHHHh--hhhccCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007555 542 VE-SVMLGV--AIIANDVSHFGFLATLSLLSVVGAAWMFCHW 580 (598)
Q Consensus 542 ~~-ll~~~~--~i~~~~~~~f~~l~l~S~~~V~~a~~l~~~~ 580 (598)
-. +.+.+. +.+...-+-......-++.++..+.+++..-
T Consensus 165 GGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 165 GGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred ccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 53 444444 5555555555555666777777766665544
No 211
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.53 E-value=5.5 Score=44.75 Aligned_cols=192 Identities=17% Similarity=0.151 Sum_probs=90.5
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhH----HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007555 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSI----IGGFSGLCASMGVAATFLSAYLVRRLG 460 (598)
Q Consensus 385 ~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~----iG~~~g~gavgGLlGtl~~~~l~rrlg 460 (598)
.+.||+++.+++|.++....+.++|...........-..+++..-++.. .|-+...-++..++--+..+++.||.|
T Consensus 252 ~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~G 331 (472)
T TIGR00769 252 STMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYG 331 (472)
T ss_pred CHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5789999999999998765555555332111222222333443334433 344444444444444455589999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh---hccc-c------cchh--HHHHHH--HHHHHhhhhhhhhhhhhhhhhccCCCc
Q 007555 461 ILKAGAAGLIFQASLLAMAVAVYW---SGSL-S------QQNP--LLFFLC--LIVLSRLGHMSYDIVGAQILQTGIPSS 526 (598)
Q Consensus 461 ~~r~g~~~l~~q~~~L~~~v~~~~---~g~~-~------~~~~--~~~~~~--~i~lsr~Gl~~fdl~~~~l~Q~~VP~~ 526 (598)
...+....-. .++..++..+. .+.. . ...+ +..+.+ ..++.|.+=..+.=+...+.-.-+++|
T Consensus 332 w~~~a~i~Pi---i~lit~~~Ff~~~~f~~~~~~~~~~l~~~pl~l~v~~g~~~~v~~k~~kYsl~dp~kEmly~pld~e 408 (472)
T TIGR00769 332 WLTAALITPL---VMLLTGVAFFSLIFFGGPAAPLVAKLGMTPLLLAVYVGAIQNILSKSTKYSLFDATKEMAYIPLDEE 408 (472)
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHhcccchhhhhhhccChHHHHHHHHHHHHHHHHHhhhccccHHHHHhcccCCHH
Confidence 7654432211 11111111110 0000 0 0001 112222 234455443333333445555667888
Q ss_pred cchhHHHHHHHHHHHH-H-HHHH---HhhhhccCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007555 527 KANLIGTTEISVASLV-E-SVML---GVAIIANDVSHFGFLATLSLLSVVGAAWMFCHW 580 (598)
Q Consensus 527 ~rGRV~sv~~sl~~~~-~-ll~~---~~~i~~~~~~~f~~l~l~S~~~V~~a~~l~~~~ 580 (598)
.|.+.=+..-.+..=. . .++. ++...+... ......+..+..+.+..|++..+
T Consensus 409 ~K~K~Ka~iD~v~~r~Gks~gs~i~~~l~~~~~~~-~~~~~~~~~i~~~i~~~Wi~~v~ 466 (472)
T TIGR00769 409 QKVKGKAAIDVVAARLGKSGGALIQQGLLVIFGSL-AASTPYLAVILLIIVTAWLAAAK 466 (472)
T ss_pred HHHHhHhhhhhhhhhhhhHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHHHHH
Confidence 8877766665554422 2 1111 111111111 13455566666666666776543
No 212
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.49 E-value=0.11 Score=60.17 Aligned_cols=127 Identities=16% Similarity=0.103 Sum_probs=86.3
Q ss_pred HHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH-HHHHHHHHHHHHHhhccc------------c
Q 007555 423 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI-FQASLLAMAVAVYWSGSL------------S 489 (598)
Q Consensus 423 yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~-~q~~~L~~~v~~~~~g~~------------~ 489 (598)
.-++.++++.+.|++.+..-++.+++.+..+++.+|.|..|...++.. ....++..++.-+..+.. +
T Consensus 59 iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 59 IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 334579999999999999999999999999999999887665444322 111222222221111100 0
Q ss_pred ---------------------------c--chhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHH
Q 007555 490 ---------------------------Q--QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS 540 (598)
Q Consensus 490 ---------------------------~--~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~ 540 (598)
. ...+.+++.+-++.++|...+.....+++-+.+|++.||+..|+..+...
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 0 01233444456666677767778888999999999999999999998888
Q ss_pred HHHHHHHHh
Q 007555 541 LVESVMLGV 549 (598)
Q Consensus 541 ~~~ll~~~~ 549 (598)
+...+++++
T Consensus 219 iG~~lG~ll 227 (633)
T TIGR00805 219 FGPAFGYLL 227 (633)
T ss_pred hhhHHHHHH
Confidence 776666555
No 213
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.42 E-value=0.76 Score=51.52 Aligned_cols=153 Identities=15% Similarity=0.096 Sum_probs=84.9
Q ss_pred CchhHHHHHHHHHHHH---HHHHHHHHHHHHHHH--HcCChhHHHHHHHHHHHHHHHcccccceeeccCC--chHHHHHH
Q 007555 146 PEGLYALYACCLAGNL---VEQLWNFAWPSAIAL--LHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSP--RIPAYICL 218 (598)
Q Consensus 146 ~r~f~~L~~gq~lS~~---G~~i~~fAlpL~v~~--lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~--Rr~vmi~~ 218 (598)
..+++.+|+.-..|.+ +..++.-..==|+-. .+.+....|+...+..+...+++|.-|.|--|.. ||+++..+
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 3345555555544444 333333322234433 5567788899999999999999999999999998 67776655
Q ss_pred HHHHHHHHHHHHHHHHH-HhhhccCCccchHHHHHHHHHHHHHHHHHHhhh-hhhhccccceeeecCCCchhHHHHHHHH
Q 007555 219 NTVQAAAQLLSAAMIIH-AHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVA-LGVAVERDWAVLLAGINRPIALAKANAV 296 (598)
Q Consensus 219 d~~q~~~v~ls~~~l~~-~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a-~~~aIerdwvp~Iv~~~~~~~L~~aNa~ 296 (598)
.+ + .+.+. ++ .....+ +.. .|+.++ .+.+.+.+ ...++-|.|+--- ...++-.||-+.
T Consensus 110 ii-~----~~g~l--lY~~l~~~~--~~~----~y~mL~----~R~l~Gvg~~n~a~lR~Y~a~~---s~~~dR~rA~a~ 169 (488)
T KOG2325|consen 110 LI-A----IIGNL--LYLALAYVP--NGV----KYLMLV----ARILTGVGVGNFAVLRAYIADA---STVEDRPRAFAA 169 (488)
T ss_pred HH-H----HHHHH--HHHHHHhcc--cch----HHHHHH----HHHHcCcCcccHHHHHHHHHhc---cCccchHHHHHH
Confidence 32 1 12222 23 222222 111 122211 12222222 1233445443321 122356677777
Q ss_pred HHHHHHHHHHhhHHHHHHHHhh
Q 007555 297 LNRIDLLCEIAGASLFGILLSK 318 (598)
Q Consensus 297 l~~id~~~~i~GP~lgGlL~s~ 318 (598)
......++.++||.++-++-+.
T Consensus 170 ~~~~~vlg~ilGp~~q~~f~~L 191 (488)
T KOG2325|consen 170 TSGGFVLGIILGPTIQLAFTPL 191 (488)
T ss_pred hhhHHHHHHHHhHHHHHHHhhh
Confidence 7777788899999888766543
No 214
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=95.38 E-value=0.66 Score=50.77 Aligned_cols=157 Identities=16% Similarity=0.116 Sum_probs=97.0
Q ss_pred CCchhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHH
Q 007555 145 HPEGLYA---LYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNT 220 (598)
Q Consensus 145 r~r~f~~---L~~gq~lS~~G~~i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~ 220 (598)
++++.++ +|...+=+..| ....+|.|..+.++ |....+.+++...++..+.=|.+|.+.||++.+|++...-.
T Consensus 216 ~~~~~W~lsllY~~tFG~Fvg---fs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~ 292 (417)
T COG2223 216 SNKDTWLLSLLYFATFGGFVG---FSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFV 292 (417)
T ss_pred cCcchHHHHHHHHHHHHHHHH---HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHH
Confidence 4555444 55554444433 56778999999999 99999999999999999999999999999998887664433
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCccchHHHHHHH-HHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHH
Q 007555 221 VQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNR 299 (598)
Q Consensus 221 ~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv-~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~ 299 (598)
+-++ ...++.+. ....+ .... ...+++ .+.+. .+....+. ++-| ++|.+-++ +...+++....
T Consensus 293 ~~~~----~~~~l~~~-~~~~~-~~~~-~~~~~~~~l~l~---~~~G~GnG-svfk-~Ip~if~~----~~G~v~G~vga 356 (417)
T COG2223 293 GMAL----AAALLSLF-LTGFG-HGGS-FVVFVAVFLALF---VFAGLGNG-SVFK-MIPVIFPK----ETGAVTGIVGA 356 (417)
T ss_pred HHHH----HHHHHHcc-ccccc-cCcc-hHHHHHHHHHHH---HHhccCcc-hhee-echHHHHh----hhhHHHHHHHH
Confidence 2111 11111111 10000 0011 112222 22232 33333343 2333 56766542 67778888887
Q ss_pred HHHHHHHhhHHHHHHHHhhhc
Q 007555 300 IDLLCEIAGASLFGILLSKYE 320 (598)
Q Consensus 300 id~~~~i~GP~lgGlL~s~~~ 320 (598)
+-.+....=|..-|..+...|
T Consensus 357 ~G~lGGf~lp~~~g~~~~~tg 377 (417)
T COG2223 357 IGGLGGFFLPLAFGVSLDLTG 377 (417)
T ss_pred hccccccchhHHHHHHHHhcc
Confidence 777777777888888888777
No 215
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=95.34 E-value=0.96 Score=47.48 Aligned_cols=154 Identities=10% Similarity=-0.078 Sum_probs=87.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALL--HP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~l--t~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~ 221 (598)
+++.+.....+.++-.-++.-..--.+.|+.+. .+ +....+.+........++-....+.++||+++||+++.+-+.
T Consensus 138 ~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l 217 (310)
T TIGR01272 138 QFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFL 217 (310)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 555666655666665545544444467777644 46 888888888888888888889999999999999987765433
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHH-HhhhhhhhccccceeeecCCCchhHHHHHHHHHHHH
Q 007555 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERL-TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI 300 (598)
Q Consensus 222 q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l-~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~i 300 (598)
..+. . + +..... .. ..++ ..++.+..... +-.....+.+. .+ ++-.++.+.+ ..
T Consensus 218 ~~~~----~-~-l~~~~~----~~---~~~~-~~~l~g~~~s~i~P~~~s~a~~~------~~----~~~~~asai~-~~ 272 (310)
T TIGR01272 218 AVLL----S-I-GAALTH----GY---VAMW-FVLALGLFNSIMFPTIFSLALNA------LG----RHTSQGSGIL-CL 272 (310)
T ss_pred HHHH----H-H-HHHHcC----CH---HHHH-HHHHHHHHHHHHHHHHHHHHHhh------hh----hhhhhhHHHH-HH
Confidence 2211 1 1 111111 11 1122 22233333222 22223222221 12 1333555554 55
Q ss_pred HHHHHHhhHHHHHHHHhhhchhH
Q 007555 301 DLLCEIAGASLFGILLSKYEPVT 323 (598)
Q Consensus 301 d~~~~i~GP~lgGlL~s~~~~~~ 323 (598)
..+...++|.+.|.+....|...
T Consensus 273 ~~~Gg~i~P~l~G~lad~~g~~~ 295 (310)
T TIGR01272 273 AIVGGAIVPLLQGSLADCLGIQL 295 (310)
T ss_pred HHhcchHHHHHHHHHHHhccchH
Confidence 66678899999999988777443
No 216
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=95.25 E-value=2.5 Score=46.31 Aligned_cols=56 Identities=16% Similarity=0.177 Sum_probs=45.8
Q ss_pred HHHHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 007555 408 LCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (598)
Q Consensus 408 L~~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r 463 (598)
+++.+...+.+.+..|+++.|+++.++|.+.+.+.+..+++....+.+.+|.+..+
T Consensus 13 ~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~ 68 (400)
T PF03825_consen 13 LYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAK 68 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHH
Confidence 33443355666777899999999999999999999999999999999999876443
No 217
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=95.21 E-value=0.6 Score=52.49 Aligned_cols=123 Identities=11% Similarity=0.072 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhh
Q 007555 432 SIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSY 511 (598)
Q Consensus 432 ~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~f 511 (598)
...+++.+...+|+.+|++.++++.+++|..++...+.... ....+...... ....+..|=++.++|.-..
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~---~iG~ii~~~a~------~~~~l~~GR~l~G~g~G~~ 159 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLF---LIGAIIIALAP------SWYQLIVGRILTGLGVGGA 159 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH---HHHHHHHHHhh------hHHHHHHHHHHhccchhhh
Confidence 35589999999999999999999999999887766543321 11111111111 2333444545555666677
Q ss_pred hhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHhhhhccCcchhHHHHH
Q 007555 512 DIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLAT 564 (598)
Q Consensus 512 dl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~~i~~~~~~~f~~l~l 564 (598)
+...-.+.=|..|++.||+..+.......+..+.++..+...+... .+|-..
T Consensus 160 ~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~-~~Wr~~ 211 (513)
T KOG0254|consen 160 SVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVY-AGWRIP 211 (513)
T ss_pred hhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCC-ccHHHH
Confidence 7788888888889999999999888777766777888877776652 444433
No 218
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=94.98 E-value=0.42 Score=53.47 Aligned_cols=127 Identities=13% Similarity=0.059 Sum_probs=80.1
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhh
Q 007555 427 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 506 (598)
Q Consensus 427 lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~ 506 (598)
..+++.+-|++.+....|.+++.+-.+++.+|+|..+...++....... -.+.+.... ...+.++..=++.++
T Consensus 68 ~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~--t~l~P~aa~-----~~~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 68 YDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALL--TLLTPLAAS-----IGFYLLLVLRFLQGL 140 (466)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHH--HHHHHHHHH-----hcchhhHHHHHHhHH
Confidence 4678889999999999999999999999999999887766544322111 011111111 001111111111222
Q ss_pred hhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhhhccCcchhHHH
Q 007555 507 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAIIANDVSHFGFL 562 (598)
Q Consensus 507 Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i~~~~~~~f~~l 562 (598)
+....--+...+..+..|+.+|+|..++..+-..+..... .+.|.+-.. .+||.
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s--~~GW~ 195 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES--SLGWP 195 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--CCCCc
Confidence 2223345677899999999999999999998887765444 355655444 45555
No 219
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=94.81 E-value=1.3 Score=45.62 Aligned_cols=132 Identities=15% Similarity=0.185 Sum_probs=76.3
Q ss_pred HH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHh---hcccccchhHHHHHH
Q 007555 424 LT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYW---SGSLSQQNPLLFFLC 499 (598)
Q Consensus 424 l~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~---~g~~~~~~~~~~~~~ 499 (598)
++ ++|++.+++..+-.++-+|+-+| +..|.+-.+.|+.....++.... ..|-...| .+..+ ..+.+.+..
T Consensus 28 Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~----~~GY~~~~l~~~~~i~-~~~~~~~~~ 101 (250)
T PF06813_consen 28 LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLG----FVGYGLLWLAVSGRIP-SLPVWLMCL 101 (250)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHH----HHHHHHHHHHHhCccC-ccchHHHHH
Confidence 44 57999999999999988888775 77888889998765544433211 11111112 22211 012222222
Q ss_pred HHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHh-hhhccCcchhHHH
Q 007555 500 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGV-AIIANDVSHFGFL 562 (598)
Q Consensus 500 ~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~-~i~~~~~~~f~~l 562 (598)
...+...|...+|......--++-|+ .||.|.|+.-+..-+.. +.+.+- +++.++++.|-.+
T Consensus 102 ~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~ 165 (250)
T PF06813_consen 102 FLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLF 165 (250)
T ss_pred HHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHH
Confidence 22233334434565544444466675 79999999888776663 455555 5565656666444
No 220
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.77 E-value=1.7 Score=42.18 Aligned_cols=149 Identities=21% Similarity=0.099 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCh--hHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHH
Q 007555 152 LYACCLAGNLVEQLWNFAWPSAIALLHPSL--LPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLS 229 (598)
Q Consensus 152 L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~--l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls 229 (598)
+..+.+.+.++...+....+.+......+. ...+.......+...+.+++.|.+.||++||+.+...... . ...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--~--~~~ 82 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLL--F--LLG 82 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHH--H--HHH
Confidence 677778888899999999999998888755 4667777777788888889999999999988766655432 1 111
Q ss_pred HHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHH-HHHHHHHhh
Q 007555 230 AAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNR-IDLLCEIAG 308 (598)
Q Consensus 230 ~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~-id~~~~i~G 308 (598)
.. ...... . ...+.+.+..+..|.......+.....+ .++.|. . .+....++.... ......++|
T Consensus 83 ~~--~~~~~~----~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~ 148 (338)
T COG0477 83 TL--LLALAP----N-VGLALLLILRLLQGLGGGGLLPVASALL-SEWFPE--A----TERGLAVGLVTLGAGALGLALG 148 (338)
T ss_pred HH--HHHhCc----c-chHHHHHHHHHHHHhhhHHHHHHHHHHH-HHhcCc--h----hHHHHHHHHHHHHHHHHHHHHH
Confidence 11 111111 0 0012222222223444433333333322 333332 0 145566666666 566778888
Q ss_pred HHHHHHHHhh
Q 007555 309 ASLFGILLSK 318 (598)
Q Consensus 309 P~lgGlL~s~ 318 (598)
|.+++.+...
T Consensus 149 ~~~~~~~~~~ 158 (338)
T COG0477 149 PLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHH
Confidence 8888877765
No 221
>PF12832 MFS_1_like: MFS_1 like family
Probab=94.72 E-value=0.3 Score=40.88 Aligned_cols=52 Identities=27% Similarity=0.316 Sum_probs=44.4
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA 467 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~ 467 (598)
+.+.++.|++++|+++.++|++.++..+..++++.+.+++.+|.+..|....
T Consensus 19 ~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 19 LYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred HHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHH
Confidence 3334555778899999999999999999999999999999999998776553
No 222
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=94.70 E-value=9.5e-06 Score=88.43 Aligned_cols=40 Identities=28% Similarity=0.233 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHH
Q 007555 182 LPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (598)
Q Consensus 182 l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~ 221 (598)
...+....+..+..++-+++.|.+.||++||++++.+.+.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3567777777888899999999999999999999887754
No 223
>PRK11462 putative transporter; Provisional
Probab=94.58 E-value=1.8 Score=48.08 Aligned_cols=115 Identities=12% Similarity=0.063 Sum_probs=68.1
Q ss_pred hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHH
Q 007555 426 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR----LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI 501 (598)
Q Consensus 426 ~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rr----lg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i 501 (598)
..|+++...|.+..++-+--.+---+.|.+..| .|..|- |.++....+.+..+..+.....+.......+....
T Consensus 39 ~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp--~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~ 116 (460)
T PRK11462 39 IFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRP--WVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITY 116 (460)
T ss_pred hhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcch--hHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 489999999998887776665555566666554 444332 22221111111222222222111111122233333
Q ss_pred HHHhhhhhhhhhhhhhhhhccCC-CccchhHHHHHHHHHHHH
Q 007555 502 VLSRLGHMSYDIVGAQILQTGIP-SSKANLIGTTEISVASLV 542 (598)
Q Consensus 502 ~lsr~Gl~~fdl~~~~l~Q~~VP-~~~rGRV~sv~~sl~~~~ 542 (598)
++..++..++|++..++.=+.++ +++|++.++......+..
T Consensus 117 ~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG 158 (460)
T PRK11462 117 TLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAG 158 (460)
T ss_pred HHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 34466778899999999999987 589999999888777654
No 224
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.45 E-value=0.33 Score=50.89 Aligned_cols=128 Identities=16% Similarity=0.084 Sum_probs=83.5
Q ss_pred HHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHH
Q 007555 171 PSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLH 249 (598)
Q Consensus 171 pL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~ 249 (598)
|.+..+.+| |+...+-.-........+.+|+-|.++|+++|+-..+.+-.. ..+++=.++.+. . +.
T Consensus 288 ~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~---~tl~~H~~l~Ft--~--------ls 354 (459)
T KOG4686|consen 288 PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACI---LTLLGHSGLFFT--F--------LS 354 (459)
T ss_pred HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHH---HHHHHhhhHHhh--h--------cc
Confidence 455667788 888777776666777789999999999999999877655432 111111122221 1 01
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhc
Q 007555 250 PWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE 320 (598)
Q Consensus 250 ~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~ 320 (598)
+ |+.+.++|....+-.-+.=+ .|+.++++ +||..+-+.++.|+.+.--+-|.++|++...-|
T Consensus 355 P-y~~m~~lGLsysllAcslWP-----~va~~vpE---~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 355 P-YTSMTFLGLSYSLLACSLWP-----CVASLVPE---EQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred H-HHHHHHHhhhHHHHHHHHhh-----hhhhhCCH---HHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 2 33333344333322222222 24557775 499999999999999999999999999977544
No 225
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=94.24 E-value=0.3 Score=53.72 Aligned_cols=56 Identities=20% Similarity=0.148 Sum_probs=45.6
Q ss_pred hhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 007555 414 LTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (598)
Q Consensus 414 l~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l 469 (598)
..+.+..+.++.+ .|++++++|.+.+++++..++...++|.+..|+|..|..++.+
T Consensus 24 gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i 80 (412)
T PF01306_consen 24 GIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFI 80 (412)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHH
T ss_pred HHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHH
Confidence 5566677778875 8999999999999999999999999999999999888776554
No 226
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=93.61 E-value=5.3 Score=43.31 Aligned_cols=135 Identities=18% Similarity=0.190 Sum_probs=89.3
Q ss_pred hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHh
Q 007555 426 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR 505 (598)
Q Consensus 426 ~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr 505 (598)
+.|++.+..|+..+.=.+.--+.+...+++.||+|..|...+++. ++..+.. +- +. .+...++.+..+.+
T Consensus 41 ~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Ll----li~~G~~--iR-~~---~~~~~L~~gt~l~G 110 (395)
T COG2807 41 DLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALL----LIAAGIL--IR-SL---GGLPLLFLGTLLAG 110 (395)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHH----HHHHHHH--HH-hc---ccHHHHHHHHHHHH
Confidence 589999999999888777766778899999999999998765432 2222222 11 10 01222333555666
Q ss_pred hhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHhhhhccCcchh-HHHHHHHHHHHHHH
Q 007555 506 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHF-GFLATLSLLSVVGA 573 (598)
Q Consensus 506 ~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~~i~~~~~~~f-~~l~l~S~~~V~~a 573 (598)
.|.-+.|+..-.++++.-|++ .|.++|++.+--.+. .....++..|..+++ +|-.-+..-++.+.
T Consensus 111 ~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~--aaLaa~lavpla~~~~gW~~aL~~WAl~al 176 (395)
T COG2807 111 AGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAG--AALAAALAVPLAQHSGGWRGALGFWALLAL 176 (395)
T ss_pred hhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHH--HHHHhhhhhHHHHhhccHHHHHHHHHHHHH
Confidence 677788999999999999864 688888877655544 344445666666666 56555555554443
No 227
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.53 E-value=3.2 Score=43.78 Aligned_cols=154 Identities=12% Similarity=0.024 Sum_probs=79.4
Q ss_pred CchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 007555 397 PVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASL 475 (598)
Q Consensus 397 pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~ 475 (598)
|.+......+.+|+-+..+|-++.+.++.+ -|+|+..-|-+.+.--.-...-+-+++.+..|.|..- +|....-..
T Consensus 264 ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~--~wv~~a~~~- 340 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL--WWVASACIL- 340 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee--hhHHHHHHH-
Confidence 444444555666655446777888887775 6998876554443222111122334556677776431 221111000
Q ss_pred HHHHHH-HHhh-cccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH-HHHHHHhhhh
Q 007555 476 LAMAVA-VYWS-GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV-ESVMLGVAII 552 (598)
Q Consensus 476 L~~~v~-~~~~-g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~-~ll~~~~~i~ 552 (598)
...+=. .++. -+| +....++ |. + -.+.--..-..+-..||||.+|...|...+++++. ...+.+.|++
T Consensus 341 tl~~H~~l~Ft~lsP---y~~m~~l-GL--s---ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 341 TLLGHSGLFFTFLSP---YTSMTFL-GL--S---YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFI 411 (459)
T ss_pred HHHHhhhHHhhhccH---HHHHHHH-hh--h---HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhee
Confidence 011111 1111 111 1111111 11 1 01111112344667799999999999999999988 4677777888
Q ss_pred ccCcchhHHH
Q 007555 553 ANDVSHFGFL 562 (598)
Q Consensus 553 ~~~~~~f~~l 562 (598)
.+.-....++
T Consensus 412 ~d~~g~y~~l 421 (459)
T KOG4686|consen 412 ADGDGSYDNL 421 (459)
T ss_pred ecCCCchhhH
Confidence 7766655555
No 228
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=93.28 E-value=5.4 Score=43.79 Aligned_cols=119 Identities=14% Similarity=0.129 Sum_probs=83.0
Q ss_pred HHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHH
Q 007555 419 LMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 497 (598)
Q Consensus 419 l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~ 497 (598)
.+++.++ .-+++..+.+.+.-+.-.|=.++++.++++.||+|..+....++. ....+...+|+... .....+|
T Consensus 34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~----l~avg~~lF~pAa~--~~~y~~F 107 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLL----LYAVGAALFWPAAS--SKSYGFF 107 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHH----HHHHHHHHHhhhhh--hhhHHHH
Confidence 4555555 479999999999988888888999999999999998776665543 22344445564422 1234456
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH
Q 007555 498 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 543 (598)
Q Consensus 498 ~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ 543 (598)
+++......|+...+...+.++=..=|++.-.+=.....+.+.+..
T Consensus 108 L~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa 153 (422)
T COG0738 108 LVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGA 153 (422)
T ss_pred HHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHH
Confidence 6655566667778899999999888888665555555555665554
No 229
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=93.18 E-value=3.9 Score=47.27 Aligned_cols=132 Identities=18% Similarity=0.166 Sum_probs=70.5
Q ss_pred HhcCCchHHHHHHHHHHH----HhhhhhhHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 007555 393 YMQQPVLPASLAYVLLCL----NVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA 467 (598)
Q Consensus 393 ~~~~pvll~~l~~~lL~~----~vll~f~~l~~~yl~-~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~ 467 (598)
|++.|.+...++...+++ .++....+++ +++. +.|-+ ....++.++-.++.-++..+.+++...+|.....+.
T Consensus 36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l-~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~ 113 (599)
T PF06609_consen 36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASIL-PYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFII 113 (599)
T ss_pred ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHH
Confidence 446666666554332221 1111222333 3444 45644 466677777777777777788899888886543332
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHH
Q 007555 468 GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEI 536 (598)
Q Consensus 468 ~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~ 536 (598)
+.. +...|..+-... ...-.++++.++.++|. ..+......++|.+|...|+...+...
T Consensus 114 g~~----l~vvG~Iv~atA-----~~~~~~iag~~l~Gvga-G~~~~~~~~isEl~p~k~R~~~~~~~~ 172 (599)
T PF06609_consen 114 GSL----LGVVGSIVCATA-----QNMNTFIAGMVLYGVGA-GVQELAALAISELVPNKWRGLGLAIAS 172 (599)
T ss_pred HHH----HHHhHHHHhhcC-----CcHHHHHHHHHHHHHhh-HHHHHHHHHHHHhcccchhhhHhHHHH
Confidence 221 112221111111 12333455666666663 445555667899999988877655443
No 230
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=93.01 E-value=2.6 Score=47.74 Aligned_cols=155 Identities=16% Similarity=0.080 Sum_probs=99.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCc-hH-HHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPR-IP-AYICLNTVQ 222 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~R-r~-vmi~~d~~q 222 (598)
+++.|..+-.|-.+..+|--+-.+=+|-+.....-+--..+....+....-++.=+..|.++|+... ++ +-..+.++.
T Consensus 296 ~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 296 KDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIA 375 (509)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHH
Confidence 7788999999999999999999999999987443355555555555555556666778889999873 33 333333221
Q ss_pred HHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHH
Q 007555 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (598)
Q Consensus 223 ~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~ 302 (598)
+++.. ...... + +..+....++.|.....+..... .+-.| +++. ++++++=+.....+.
T Consensus 376 ----gl~~~--~~p~~~-----~--~~~l~~~~~~fG~~~g~~~~l~~-~i~~~----~~g~---~~l~~a~Gl~l~~~g 434 (509)
T KOG2504|consen 376 ----GLARL--FLPFAT-----T--YVGLIVFSILFGFCVGSFSSLTP-VILVD----LVGL---EKLSNAYGLLLLFQG 434 (509)
T ss_pred ----HHHHH--HHHHhc-----c--HHHHHHHHHHHHHHHHHHHHHHH-HHHHH----HcCh---hhcchHHHHHHHHhH
Confidence 11111 111111 1 13344444444544333332222 22234 6665 489999999999999
Q ss_pred HHHHhhHHHHHHHHhhhc
Q 007555 303 LCEIAGASLFGILLSKYE 320 (598)
Q Consensus 303 ~~~i~GP~lgGlL~s~~~ 320 (598)
+..++||+++|.++...+
T Consensus 435 i~~l~gpPiag~~~d~tg 452 (509)
T KOG2504|consen 435 IGALVGPPIAGLLYDITG 452 (509)
T ss_pred HHHHcCcccceeeeeccC
Confidence 999999999998887666
No 231
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=92.48 E-value=20 Score=39.46 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=80.7
Q ss_pred ccccchhhhccCCCCCCCCCcceeecchhhhhhhhhhcccccccccccCcccCcccccCCCCChhhhhhhccCCC-CCch
Q 007555 70 HVAADDEVREDMSTNEMECPVSVVQLNSEMLQINSEMLQMDSLTLLTEGTFVDSLLTTIPVLSEEEQNALAATPA-HPEG 148 (598)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~r~ 148 (598)
...+|-+++||.+.++. ..|+-.-+..+. -+.++.++.+|+++.|+ ++.-. ++++.++-+- |-.-
T Consensus 12 ~~~~~~~~~~~~~e~~~--V~~~~~~~~s~~------~~~~~~~~~~~~~~~~~--~k~~t----v~ea~~aigfgrfq~ 77 (528)
T KOG0253|consen 12 MSPTESKKQEDVSETEL--VYPVELADATIQ------PSKSDDDLFDSNDFSDT--AKSFT----VDEAMNAIGFGRFQW 77 (528)
T ss_pred cCcchhhHHHhhhhhcc--ccchhhcccccC------CCccccCCccccccccc--cceee----ehhhhhhcCcccchh
Confidence 34566777777765554 345533333332 23345777888888777 22222 2222333333 2111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH---HHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHH
Q 007555 149 LYALYACCLAGNLVEQLWNFAWPS---AIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (598)
Q Consensus 149 f~~L~~gq~lS~~G~~i~~fAlpL---~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~ 221 (598)
+...+.| ..-..|.|+..-..+ .+...++ +..+.++.+.+..+-.++-+-.-|...|++.||+....+-++
T Consensus 78 yl~~~ag--~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~ 152 (528)
T KOG0253|consen 78 YLFFVAG--MGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLV 152 (528)
T ss_pred hHHHHhh--hHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHH
Confidence 2223333 233344444444433 3455677 888889999999999999999999999999999987766543
No 232
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=92.47 E-value=3.1 Score=46.60 Aligned_cols=118 Identities=14% Similarity=0.034 Sum_probs=75.6
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhh
Q 007555 427 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 506 (598)
Q Consensus 427 lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~ 506 (598)
.+.+.....+..+...+|-++|+++++.+..|+|..+...+++..+.++- +......+ ...++..=+++++
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~---~~~a~a~~------~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFG---ILTAFAPN------YWMFLIFRFLSGF 183 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHH---HHHHHhCc------HHHHHHHHHHHHh
Confidence 35566777888899999999999999999999999888777665443322 11111111 1122222222222
Q ss_pred hhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhcc
Q 007555 507 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIAN 554 (598)
Q Consensus 507 Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~ 554 (598)
+..........+.=|.+++++||++.+. ........ ++..+.+.+.+
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 3333455667788899999999999999 65665554 34444455555
No 233
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.98 E-value=7.3 Score=45.90 Aligned_cols=82 Identities=11% Similarity=0.219 Sum_probs=63.1
Q ss_pred hhHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHH-HHHHHHHHHHHh
Q 007555 381 VGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGV-AATFLSAYLVRR 458 (598)
Q Consensus 381 ~~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gavgGL-lGtl~~~~l~rr 458 (598)
...+|+..-++-++++|++.-.++...+....+.++.+.++-|+.+ .|.+++.--.+.|..++.+. +|.++.|++.||
T Consensus 376 ~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikk 455 (735)
T KOG3626|consen 376 KKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKK 455 (735)
T ss_pred hhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeee
Confidence 3567777788889999998876666666555545676777779874 69999988888888877775 688899999998
Q ss_pred hhhh
Q 007555 459 LGIL 462 (598)
Q Consensus 459 lg~~ 462 (598)
+++.
T Consensus 456 fkl~ 459 (735)
T KOG3626|consen 456 FKLS 459 (735)
T ss_pred eccc
Confidence 8754
No 234
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=91.85 E-value=0.15 Score=56.31 Aligned_cols=113 Identities=16% Similarity=0.165 Sum_probs=79.1
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH-HHHHHHHHHHhhcccccchhHHHHHHHHHHHh
Q 007555 427 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQA-SLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR 505 (598)
Q Consensus 427 lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~-~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr 505 (598)
.+.+++..|++.....+.=.+++-+++.+.+|.+..+....++.... +.++.+.. .-++.++.+=.+-+
T Consensus 63 fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs----------~~Fwq~~l~R~~vG 132 (493)
T KOG1330|consen 63 FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS----------NHFWQVLLCRGFVG 132 (493)
T ss_pred cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH----------HHHHHHHHHHHHhc
Confidence 58899999999999999999999999999999987665544432211 11111111 12333444444556
Q ss_pred hhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHh
Q 007555 506 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 549 (598)
Q Consensus 506 ~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~ 549 (598)
+|..+++...++++-...|+++|||++++.+..-..-.-++++.
T Consensus 133 iGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vv 176 (493)
T KOG1330|consen 133 IGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVV 176 (493)
T ss_pred cchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEe
Confidence 78889999999999999999999999998875544433334443
No 235
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=90.95 E-value=0.91 Score=50.58 Aligned_cols=131 Identities=13% Similarity=0.015 Sum_probs=82.0
Q ss_pred cC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHH-HHHhhhccCCccchHHHHHHHH
Q 007555 178 HP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI-IHAHTVIPTSSSMLLHPWFFVL 255 (598)
Q Consensus 178 t~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l-~~~~~~~~~~~~~l~~~l~vv~ 255 (598)
.| |+...|+......+..++.....|.+.+|++.|+++..+.++..+.......+. -+....+. ... +.+....
T Consensus 283 lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi--~~~--~~~~~~~ 358 (468)
T TIGR00788 283 LPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGI--SDE--VFVLGDS 358 (468)
T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCC--CCe--eeeeehh
Confidence 45 777888888888889999999999999999999998877765443311100000 00000000 010 1122223
Q ss_pred HHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhc
Q 007555 256 VLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE 320 (598)
Q Consensus 256 ~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~ 320 (598)
++.+....+...+....+.+ +++++ +-...-+.+..++.++..+|+.+||.+...+|
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~-----~~p~~---~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLAR-----LCPSG---CESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHccHHHHHHH-----hCCCC---ceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33444444444444333322 56653 56788889999999999999999999999887
No 236
>PF12832 MFS_1_like: MFS_1 like family
Probab=90.63 E-value=0.32 Score=40.70 Aligned_cols=46 Identities=20% Similarity=0.222 Sum_probs=39.1
Q ss_pred HHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHH
Q 007555 171 PSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYIC 217 (598)
Q Consensus 171 pL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~ 217 (598)
|+|.-+ .| |..++++...+..+..++..|+.|.++||++|+|.+..
T Consensus 24 ~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 24 PLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred hHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHH
Confidence 344443 56 99999999999999999999999999999999987653
No 237
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=89.64 E-value=4.1 Score=44.91 Aligned_cols=154 Identities=14% Similarity=0.064 Sum_probs=97.3
Q ss_pred CCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHHH
Q 007555 145 HPEGLYALYACCLAGNLVEQ-LWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (598)
Q Consensus 145 r~r~f~~L~~gq~lS~~G~~-i~~fAlpL~v~~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q 222 (598)
++++..++.++.++=+=|-. +..++ ..|.....+ |-..+.++++...+-.++.+.++|.+.||++-|+++....+.
T Consensus 250 ~~~~i~~FLiA~~~~~DGv~til~~~-~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi- 327 (438)
T COG2270 250 GRKNLVLFLIARFFYIDGVNTILAMG-GVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVI- 327 (438)
T ss_pred cccchHHHHHHHHHHHhhHHHHHHHH-HHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHH-
Confidence 55678888777766444433 33333 345555677 999999999999999999999999999999988766554332
Q ss_pred HHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHH
Q 007555 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (598)
Q Consensus 223 ~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~ 302 (598)
.+.+. ++..... .... .| +..++.|. ..++++ +.-|.|.-.++|++ +=.+.=+.....+.
T Consensus 328 -----~~~~~-~~~~~~~---~~~~--f~-i~gll~g~---s~G~~q--A~SRSy~~~lvp~~---k~~~fFglyaltgr 387 (438)
T COG2270 328 -----LSIAA-LYLIFLE---GELD--FW-ILGLLVGT---SLGGAQ--ASSRSYLARLVPKG---KEGRFFGLYALTGR 387 (438)
T ss_pred -----HHHHH-HHHHHcc---ccHH--HH-HHHHHHHH---hcchHH--HHHHHHHHHhCCCc---cccceeehhhhhhh
Confidence 12222 1211221 1111 11 11122221 122222 22366666688875 44566777888889
Q ss_pred HHHHhhHHHHHHHHhhhc
Q 007555 303 LCEIAGASLFGILLSKYE 320 (598)
Q Consensus 303 ~~~i~GP~lgGlL~s~~~ 320 (598)
.+.+.||.+.|++....|
T Consensus 388 a~S~~gp~lv~v~t~iTg 405 (438)
T COG2270 388 AASFLGPFLVAVITQITG 405 (438)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999988766
No 238
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=88.67 E-value=3.6 Score=35.29 Aligned_cols=55 Identities=20% Similarity=0.132 Sum_probs=44.4
Q ss_pred hhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 007555 415 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (598)
Q Consensus 415 ~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l 469 (598)
.|..+++....+.+++..+-|++-++.-+|=++|++...++.++.+..+....++
T Consensus 10 ayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l 64 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGL 64 (85)
T ss_pred HHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 3556777777789999999999999999999999999999988766555544443
No 239
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=87.92 E-value=48 Score=36.63 Aligned_cols=149 Identities=10% Similarity=0.040 Sum_probs=68.2
Q ss_pred HhcCCchHHHHHHHHHH-HHhhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 007555 393 YMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIF 471 (598)
Q Consensus 393 ~~~~pvll~~l~~~lL~-~~vll~f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~ 471 (598)
..+-|-.+....+-+.+ +.+ ..-+++...-+.++|++...+++.--..-..++++.+..+++...-.+...-.-++..
T Consensus 261 vLklk~v~~la~i~lt~K~gf-~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~ 339 (510)
T KOG3574|consen 261 VLKLKSVRWLAGILLTGKLGF-QAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPY 339 (510)
T ss_pred HHcCccHHHHHHHHHHHHHHh-hhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhH
Confidence 44555555433333322 222 2344555556678999999988766444445555555555443321111111111111
Q ss_pred HHHHHHHHHH-HHhhccccc---ch--hHHH-HHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH
Q 007555 472 QASLLAMAVA-VYWSGSLSQ---QN--PLLF-FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 542 (598)
Q Consensus 472 q~~~L~~~v~-~~~~g~~~~---~~--~~~~-~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~ 542 (598)
-......... +++.+.... .. ..++ .+..-.+-.......-+..+..--+.-|++.-|.=+...++++++-
T Consensus 340 R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLG 417 (510)
T KOG3574|consen 340 RLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLG 417 (510)
T ss_pred HHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhc
Confidence 1111122222 333221111 00 1111 1111111111112223445555666778889999999999988876
No 240
>PRK03612 spermidine synthase; Provisional
Probab=87.42 E-value=55 Score=37.27 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccce
Q 007555 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGK 204 (598)
Q Consensus 148 ~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGv 204 (598)
.-+.++..-++|-+..-++|..+.=++....|+ +++.....+...++|.-.|.
T Consensus 15 ~~~~l~~~~f~sg~~~L~yEv~~~r~l~~~~G~----s~~~~~~ii~~fl~glalGs 67 (521)
T PRK03612 15 DRALLLAAVFVCAACGLVYELLLGTLASYLLGD----SVTQFSTVIGLMLFAMGVGA 67 (521)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc----hHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999999999999994 33333334444444444433
No 241
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=87.08 E-value=0.19 Score=57.31 Aligned_cols=175 Identities=14% Similarity=0.213 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHh-cCCChhHHHHHHHHHHH-HHHHHHHHHHHHHHhh
Q 007555 382 GIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCAS-MGVAATFLSAYLVRRL 459 (598)
Q Consensus 382 ~~~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~-lg~s~~~iG~~~g~gav-gGLlGtl~~~~l~rrl 459 (598)
..+|+...++.+.++|++.-..........++..+.+.++-|+.+ -+.+++.-..+.|+..+ ++.+|.++.+.+.||+
T Consensus 290 ~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~ 369 (539)
T PF03137_consen 290 SIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKF 369 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEe
Confidence 456676777888999988764443333333335677778888874 58888887777776666 4467888888898888
Q ss_pred hhhHHH--HHHHHHHHHHHHHHHHHHhh--------c--ccc---------------------------------cc--h
Q 007555 460 GILKAG--AAGLIFQASLLAMAVAVYWS--------G--SLS---------------------------------QQ--N 492 (598)
Q Consensus 460 g~~r~g--~~~l~~q~~~L~~~v~~~~~--------g--~~~---------------------------------~~--~ 492 (598)
++...+ .+.+....+.+......++. | .++ .. .
T Consensus 370 kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~ 449 (539)
T PF03137_consen 370 KLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCN 449 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCccccc
Confidence 754222 22222111111110011100 0 000 00 0
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH--HHHHHHhhhhccCc
Q 007555 493 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV--ESVMLGVAIIANDV 556 (598)
Q Consensus 493 ~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~--~ll~~~~~i~~~~~ 556 (598)
.+..|+.+++...+..-+-.++...+.=+-||+|+|.-..|++..+..++ .+.+.+.|.+.+..
T Consensus 450 ~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 450 KLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ------------------------------------------------------------------
T ss_pred ccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 12333333222222222335677777889999999999999999888877 36666666665544
No 242
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.77 E-value=4 Score=44.83 Aligned_cols=119 Identities=19% Similarity=0.213 Sum_probs=76.7
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhh
Q 007555 427 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 506 (598)
Q Consensus 427 lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~ 506 (598)
.+-..+++|++.+.-++..++..-..|.+..|+|..--...++.. +.....+|..+. ..+.++ + .=.+-++
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~v----mf~sTilFafg~---sy~~l~-v-AR~LQgv 171 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFV----MFLSTILFAFGN---SYPMLF-V-ARSLQGV 171 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHH----HHHHHHHHHHcc---hhHHHH-H-HHHHhhh
Confidence 455678999999999999999999999999999965434434321 222233443342 122222 2 2334455
Q ss_pred hhhhhhhhhhhhhhccCCCc-cchhHHHHHHHHHHHHHHHHHHh-hhhcc
Q 007555 507 GHMSYDIVGAQILQTGIPSS-KANLIGTTEISVASLVESVMLGV-AIIAN 554 (598)
Q Consensus 507 Gl~~fdl~~~~l~Q~~VP~~-~rGRV~sv~~sl~~~~~ll~~~~-~i~~~ 554 (598)
|-...|++...++-+..|+| +||+|+|+.-.-..+-.+++... |++.+
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe 221 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE 221 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh
Confidence 66677888888887777665 57999998776666555555444 44433
No 243
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=86.60 E-value=11 Score=42.14 Aligned_cols=152 Identities=14% Similarity=0.154 Sum_probs=86.0
Q ss_pred hcCCChhHHHHHHHHHHHHHHHHHHHHHHH----HHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchh-HHHHHHH
Q 007555 426 QRGLNPSIIGGFSGLCASMGVAATFLSAYL----VRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP-LLFFLCL 500 (598)
Q Consensus 426 ~lg~s~~~iG~~~g~gavgGLlGtl~~~~l----~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~-~~~~~~~ 500 (598)
..|+++...|.+..+.=+-=.+.--+.|.+ .+|.|..|= |.++......+.++..++....+.... .+.+. -
T Consensus 42 v~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP--~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v-t 118 (467)
T COG2211 42 VFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRP--WLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV-T 118 (467)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccH--HHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH-H
Confidence 479999888877766554443333333433 334444332 222222222233333343332111111 11111 1
Q ss_pred HHHHhhhhhhhhhhhhhhhhccCCC-ccchhHHHHHHHHHHHHH-----HHHHHhhhhccCcchhHHHHHHHHHHHHHHH
Q 007555 501 IVLSRLGHMSYDIVGAQILQTGIPS-SKANLIGTTEISVASLVE-----SVMLGVAIIANDVSHFGFLATLSLLSVVGAA 574 (598)
Q Consensus 501 i~lsr~Gl~~fdl~~~~l~Q~~VP~-~~rGRV~sv~~sl~~~~~-----ll~~~~~i~~~~~~~f~~l~l~S~~~V~~a~ 574 (598)
-++..++..+.|++..++.=+.+++ ++|-+.++..+..+++.. ..++.+..+++...++++.....+..+....
T Consensus 119 Y~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i 198 (467)
T COG2211 119 YMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVI 198 (467)
T ss_pred HHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHH
Confidence 1222345567799999999998855 899999999988888773 2234456777777788988777766666554
Q ss_pred HHHHHH
Q 007555 575 WMFCHW 580 (598)
Q Consensus 575 ~l~~~~ 580 (598)
.+++.+
T Consensus 199 ~~l~~~ 204 (467)
T COG2211 199 LLLFCF 204 (467)
T ss_pred HHHHHH
Confidence 544443
No 244
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=86.44 E-value=11 Score=42.91 Aligned_cols=153 Identities=14% Similarity=0.058 Sum_probs=92.1
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH-hhcccccchhHHH--
Q 007555 420 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVY-WSGSLSQQNPLLF-- 496 (598)
Q Consensus 420 ~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~-~~g~~~~~~~~~~-- 496 (598)
|.-++++.|-.+...|..-..+=+|.+..=+...++.+++|..+....++.. ...=...+ ...++ |.++-
T Consensus 394 LfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~----~~~Rf~~~S~L~n~---W~vLPie 466 (618)
T KOG3762|consen 394 LFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLAC----NVGRFLYYSYLQNP---WMVLPIE 466 (618)
T ss_pred HHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhH----HHHHHHHHHHhcCc---hheeeHH
Confidence 3335556788888999888888888899989999999999987765544321 11111100 01111 11111
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH--HHHHHHhhhhccCcchhHHHHHHHHHHHHH-H
Q 007555 497 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV--ESVMLGVAIIANDVSHFGFLATLSLLSVVG-A 573 (598)
Q Consensus 497 ~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~--~ll~~~~~i~~~~~~~f~~l~l~S~~~V~~-a 573 (598)
++-++... -+| .+..+++-...|++++-.+.++...+-.+. .+++++.|.+...........+.+++.+.. +
T Consensus 467 ilqgit~a--liW---aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 467 ILQGITHA--LIW---AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred HHHHHHHH--HHH---HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 11122111 123 466778888899999998888877776665 367777777777766655555555544433 3
Q ss_pred HHHHHHHhcCC
Q 007555 574 AWMFCHWLLNP 584 (598)
Q Consensus 574 ~~l~~~~l~~~ 584 (598)
+-....+++++
T Consensus 542 ~~~~iq~~l~~ 552 (618)
T KOG3762|consen 542 LFISIQLLLKR 552 (618)
T ss_pred HHHHhhhhhcc
Confidence 33334554444
No 245
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=85.81 E-value=58 Score=35.51 Aligned_cols=244 Identities=14% Similarity=0.059 Sum_probs=113.2
Q ss_pred eeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHH---HHHHHhhccccc
Q 007555 278 AVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIIL---TWFTNKISSGVL 354 (598)
Q Consensus 278 vp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgGlL~s~~~~~~~l~~~~~~~~~S~~~~~l~---~~li~rv~~~~l 354 (598)
+=..|++ ++..++-+..|..-...+.+|-.++=++++.-.. .... +|..|+....+. .+.+.+..+...
T Consensus 119 IYs~Vd~---~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~-sy~~----LN~ISL~~~~ia~~~A~fLP~v~rSl~ 190 (433)
T KOG3810|consen 119 IYSKVDP---EMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETL-SYTT----LNYISLAEVTIAVLLALFLPRVKRSLY 190 (433)
T ss_pred eeeecCH---HHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhccc-chhh----hchhhHHHHHHHHHHHhhCCCCchhhh
Confidence 3335553 5999999999999999999999999999885432 1112 222332222111 111111100000
Q ss_pred ccccccccccCCCCCCCCC--CCccchhhhHHHHHHHHHHHhcCCch-HHHHHHHHH---HHHhhhhhhHHHHHHHHhc-
Q 007555 355 DRAKCSQSCCRTSNEGPVP--DADNIVDVGIEAIKLGWKEYMQQPVL-PASLAYVLL---CLNVVLTPGSLMTAFLTQR- 427 (598)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~eG~~~~~~~pvl-l~~l~~~lL---~~~vll~f~~l~~~yl~~l- 427 (598)
.+.++.+....+. |+..+ +..+..+..+..+.+.++..+++|.+ ..++-.++- |+-| ..+ .-+ .-++.
T Consensus 191 f~~~~~~~~v~~~-e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV-~nY--~Q~-LW~~~~ 265 (433)
T KOG3810|consen 191 FHRLEDKISVGDL-EEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQV-TNY--TQI-LWKEVA 265 (433)
T ss_pred hhcccccceeccc-hhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHH-HHH--HHH-HHHhhC
Confidence 0011111000000 00000 00111223455555666666777754 446554432 2222 011 111 11121
Q ss_pred -CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhh
Q 007555 428 -GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 506 (598)
Q Consensus 428 -g~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~ 506 (598)
.-....=|...++.-+.|.++++.++.+.-+....+-.+.++. -+..+..+++.... .. +++.-.+-++.|
T Consensus 266 ~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~----s~~~agllf~m~~t-~~--Iw~~Ya~yvlfr- 337 (433)
T KOG3810|consen 266 PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVG----SAVQAGLLFIMAQT-QH--IWVCYAGYVLFR- 337 (433)
T ss_pred CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHH----HHHhhhhhhhhhcc-cc--eehhhhhHHHHH-
Confidence 1122245788888888888899988887544333222222211 11222233333211 11 111111222233
Q ss_pred hhhhhhhh-hhhhhhccCCCccchhHHHHHHHHHHHH
Q 007555 507 GHMSYDIV-GAQILQTGIPSSKANLIGTTEISVASLV 542 (598)
Q Consensus 507 Gl~~fdl~-~~~l~Q~~VP~~~rGRV~sv~~sl~~~~ 542 (598)
+...+-++ .+..+-+...+|.-|-|||+..-++-+.
T Consensus 338 ~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~l 374 (433)
T KOG3810|consen 338 VIYQLTITIATFQIARNLSSELFGLVFGINTFVALIL 374 (433)
T ss_pred hhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHH
Confidence 12222222 2344557778899999999988777766
No 246
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=83.86 E-value=63 Score=35.04 Aligned_cols=149 Identities=16% Similarity=0.015 Sum_probs=74.6
Q ss_pred hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHH---HHHHHH
Q 007555 426 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF---FLCLIV 502 (598)
Q Consensus 426 ~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~---~~~~i~ 502 (598)
+.|++..+++.+..+|-+.+.+-+-..+.+..|+|..|.-+.... .....|+ +... +....++ +++|+.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~ci---ly~~scl---~k~~--~~~~~L~~GRvlgGia 134 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCI---LYSLSCL---TKHS--SNYPVLLLGRVLGGIA 134 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHH---HHHHHHH---HHhc--cccHHHHHHHHHHHHH
Confidence 569999999999988888777666666778999998665432211 1111221 1111 1112211 112222
Q ss_pred HHhhhhhhh-hhhhhhhhhccCCCccchhHHHHHHHHHHHH-HHHHHHhh-hhccCcch-hHHHHHHHHHHHHHH-HHHH
Q 007555 503 LSRLGHMSY-DIVGAQILQTGIPSSKANLIGTTEISVASLV-ESVMLGVA-IIANDVSH-FGFLATLSLLSVVGA-AWMF 577 (598)
Q Consensus 503 lsr~Gl~~f-dl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~-~ll~~~~~-i~~~~~~~-f~~l~l~S~~~V~~a-~~l~ 577 (598)
.+-+.- .| .=.+...-++..|+|.+++.++....+.+.. -+++-+.+ .+.+..+. ...+...++.....+ ....
T Consensus 135 TSLLfS-~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 135 TSLLFS-AFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHH-HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 221111 11 1123344677899999999998666443333 22222221 22222221 233444444444443 3444
Q ss_pred HHHhcC
Q 007555 578 CHWLLN 583 (598)
Q Consensus 578 ~~~l~~ 583 (598)
..|--|
T Consensus 214 ~~W~EN 219 (354)
T PF05631_consen 214 KTWPEN 219 (354)
T ss_pred hccccc
Confidence 566444
No 247
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=83.74 E-value=0.028 Score=61.20 Aligned_cols=119 Identities=11% Similarity=0.036 Sum_probs=71.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhh
Q 007555 431 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS 510 (598)
Q Consensus 431 ~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~ 510 (598)
+...+...+...+|.++|+++++.+.+|+|..+....+.... ..+.......+ .. .....+..+-++.++|.-.
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~----~i~~~~~~~~~-~~-~~~~~~~~~R~~~G~~~g~ 118 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM----IIGSILIAFAP-SY-NNFWMLLIGRFLIGFGIGG 118 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccccccccccccc----ccccccccccc-cc-ccccccccccccccccccc
Confidence 346788889999999999999999999999876655432211 11111111010 00 0122222222223333334
Q ss_pred hhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHhhhhccC
Q 007555 511 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 555 (598)
Q Consensus 511 fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~~i~~~~ 555 (598)
.......++.|.+|+++||+..+........-.+++.+++.....
T Consensus 119 ~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~ 163 (451)
T PF00083_consen 119 AYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY 163 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 456778899999999999999888876654444455555443333
No 248
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=83.62 E-value=45 Score=39.15 Aligned_cols=50 Identities=16% Similarity=0.263 Sum_probs=33.0
Q ss_pred hHHHHHHHHh-cCCChh----HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 007555 417 GSLMTAFLTQ-RGLNPS----IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (598)
Q Consensus 417 ~~l~~~yl~~-lg~s~~----~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l 469 (598)
.++++.|+.+ +|+++. .++.+.+..-+.+++|++++- +++|..++..++.
T Consensus 7 ~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD---~~lG~~~tIl~~~ 61 (654)
T TIGR00926 7 RTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIAD---GWLGKFKTILYLS 61 (654)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHH
Confidence 4556666654 677655 466777777888888888876 4566666655443
No 249
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=83.28 E-value=65 Score=35.54 Aligned_cols=82 Identities=10% Similarity=0.025 Sum_probs=52.0
Q ss_pred HHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhccCcchhHHHHH-HHHHHHHHHHHHHHHH
Q 007555 503 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIANDVSHFGFLAT-LSLLSVVGAAWMFCHW 580 (598)
Q Consensus 503 lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~~~~~~f~~l~l-~S~~~V~~a~~l~~~~ 580 (598)
+.++|+-.-..+...+.=+.+|||+|+|+-++.-++-..-. ..+...+.+.++.++-...-+ -.+..+.....+...|
T Consensus 98 l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~w 177 (403)
T PF03209_consen 98 LYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALW 177 (403)
T ss_pred HHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445545566777899999999999999988776654443 344555767777666665533 3444444455555666
Q ss_pred hcCC
Q 007555 581 LLNP 584 (598)
Q Consensus 581 l~~~ 584 (598)
-..+
T Consensus 178 g~E~ 181 (403)
T PF03209_consen 178 GQEP 181 (403)
T ss_pred hccc
Confidence 4433
No 250
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=83.09 E-value=11 Score=41.39 Aligned_cols=139 Identities=11% Similarity=0.030 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHHH-------HHcC-ChhHHHHHHHHHHHHHHHcccccceeeccCC--chHHHHHHHHHHHHHHHHH
Q 007555 160 NLVEQLWNFAWPSAIA-------LLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSP--RIPAYICLNTVQAAAQLLS 229 (598)
Q Consensus 160 ~~G~~i~~fAlpL~v~-------~lt~-S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~--Rr~vmi~~d~~q~~~v~ls 229 (598)
.+-.-++.+-.+.|.. .-.+ |..+.|-+-....+-..++....+..+||.. -+-..... +.+.
T Consensus 267 ~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~-------l~~~ 339 (451)
T KOG2615|consen 267 GLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFS-------LLLI 339 (451)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHH-------HHHH
Confidence 3444455555554432 2234 5666665555555555555555555566554 22111111 1122
Q ss_pred HHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhH
Q 007555 230 AAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA 309 (598)
Q Consensus 230 ~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP 309 (598)
++.++. ..... . ...+++...+.+..+....+..+..+.+ ..++ ++--.+|+..+.+..+++.+||
T Consensus 340 vP~~ll-ls~~~---~--~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~-----~~~~---~qrG~~~Gi~~Sl~alaRaiGP 405 (451)
T KOG2615|consen 340 VPAFLL-LSLAR---T--PVVLYLGSTLKSFSTASVVTCLTSLVHK-----YGPQ---SQRGTLNGIFRSLGALARAIGP 405 (451)
T ss_pred HHHHHH-Hhccc---c--chhhhHHHHHHHHHHHHhhHHHHHHHHh-----cCCc---ccchHHHHHHHHHHHHHHHhhh
Confidence 232222 12111 0 1245555555555555555555544433 3333 3778999999999999999999
Q ss_pred HHHHHHHhhh
Q 007555 310 SLFGILLSKY 319 (598)
Q Consensus 310 ~lgGlL~s~~ 319 (598)
+++|.++.+.
T Consensus 406 lv~g~i~~Ws 415 (451)
T KOG2615|consen 406 LVSGVIFSWS 415 (451)
T ss_pred hhhheeEEEe
Confidence 9999998864
No 251
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=81.21 E-value=90 Score=35.38 Aligned_cols=83 Identities=20% Similarity=0.222 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhhhhhhHHHHHHHHhcCCChhH----HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007555 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSI----IGGFSGLCASMGVAATFLSAYLVRRL 459 (598)
Q Consensus 384 ~~i~eG~~~~~~~pvll~~l~~~lL~~~vll~f~~l~~~yl~~lg~s~~~----iG~~~g~gavgGLlGtl~~~~l~rrl 459 (598)
-.++||+++..++|.++....+.+.|....-..+...-..++++--++.. .|-+....++..++-.++.+++.||.
T Consensus 267 ~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~ 346 (491)
T PF03219_consen 267 MSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF 346 (491)
T ss_pred ccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35789999999999998866666655332122333333344443333333 34444444444444447788888998
Q ss_pred hhhHHHH
Q 007555 460 GILKAGA 466 (598)
Q Consensus 460 g~~r~g~ 466 (598)
|...+..
T Consensus 347 GW~~~Al 353 (491)
T PF03219_consen 347 GWRTAAL 353 (491)
T ss_pred hHHHHHH
Confidence 8654443
No 252
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=80.64 E-value=9.5 Score=41.76 Aligned_cols=93 Identities=12% Similarity=-0.020 Sum_probs=49.9
Q ss_pred ccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccce
Q 007555 199 GPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWA 278 (598)
Q Consensus 199 gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwv 278 (598)
.++.|+++||.+||+.|-.+-++-.+. .+++..-.+ . ++..+++-..+.+.+.+.|++. .|.
T Consensus 398 lLIt~~iverlGRKkTMal~l~~f~if--------lfll~~c~~-r-------n~~tvllf~arafisg~fqvaY--vYt 459 (528)
T KOG0253|consen 398 LLITGVIVERLGRKKTMALSLILFGIF--------LFLLTTCKT-R-------NAYTVLLFTARAFISGAFQVAY--VYT 459 (528)
T ss_pred hhHHHHHHHHhcchhHHHHHHHHHHHH--------HHHHHHhcC-c-------chhHHHHHHHHHHHhchheEEE--Eec
Confidence 346799999999999998776532211 111111110 1 1111222233444455555543 366
Q ss_pred eeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHH
Q 007555 279 VLLAGINRPIALAKANAVLNRIDLLCEIAGASLF 312 (598)
Q Consensus 279 p~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lg 312 (598)
|.+-|.. --+.+-+.-....-+..|+.|.++
T Consensus 460 PEVyPTa---vRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 460 PEVYPTA---VRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred Ccccchh---hhhcchhhhhhHHhhhhhhhhHHH
Confidence 7776642 333344444455557788888888
No 253
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.88 E-value=1.3e+02 Score=33.95 Aligned_cols=141 Identities=13% Similarity=-0.021 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC-Ch----hHHHHH-HHHHHHHHHHcccccceeeccCCchHHHHHHHHHHHHHHH
Q 007555 154 ACCLAGNLVEQLWNFAWPSAIALLHP-SL----LPVAVM-GFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (598)
Q Consensus 154 ~gq~lS~~G~~i~~fAlpL~v~~lt~-S~----l~~av~-~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ 227 (598)
.|+..-..|-.-..|.....+...+. .+ -..+.+ ..+......+.+.+++-++|...-|..|+..-..
T Consensus 16 ~g~~~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~------ 89 (461)
T KOG3098|consen 16 FGFLFLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATC------ 89 (461)
T ss_pred hhHHHHhHhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHH------
Confidence 44444444444455555555554444 21 112333 3344556678899999999999999988754321
Q ss_pred HHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccceeeecCCCchhHHHHHHHHHHHHHHHHHHh
Q 007555 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (598)
Q Consensus 228 ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~ 307 (598)
..+....+... + .+..|..-+++|+-..+.-.++.. |+-.-. +++...|.-+..=.+-..|.+.
T Consensus 90 --y~~f~~gfl~~--N----~y~~yfssallG~Gaallw~GqG~-----ylt~~s---t~~tie~Nisi~Wai~~~~li~ 153 (461)
T KOG3098|consen 90 --YAAFPLGFLFP--N----SYYLYFSSALLGFGAALLWTGQGG-----YLTSNS---TRETIERNISIFWAIGQSSLII 153 (461)
T ss_pred --HHHHHHHHHhc--c----hHHHHHHHHHhhhhHHheecccce-----ehhhcC---ChhhHHHHHHHHHHHHHHHHHh
Confidence 11101111111 1 245677777888888876666643 222122 2346777777777788888887
Q ss_pred hHHHHHHHH
Q 007555 308 GASLFGILL 316 (598)
Q Consensus 308 GP~lgGlL~ 316 (598)
|-..-..+.
T Consensus 154 Ggi~l~~~~ 162 (461)
T KOG3098|consen 154 GGIILFIYF 162 (461)
T ss_pred hhHhheeee
Confidence 755444443
No 254
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=76.24 E-value=54 Score=37.08 Aligned_cols=46 Identities=9% Similarity=0.065 Sum_probs=39.3
Q ss_pred hHHHHHHHHh--cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007555 417 GSLMTAFLTQ--RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (598)
Q Consensus 417 ~~l~~~yl~~--lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~ 462 (598)
..-+-+|..+ .+.+.+..|++.++.++|-.+++.+++++.+|.+..
T Consensus 54 ~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~ 101 (488)
T KOG2325|consen 54 LTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV 101 (488)
T ss_pred EeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc
Confidence 3456668886 788899999999999999999999999998887743
No 255
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=69.51 E-value=60 Score=36.82 Aligned_cols=150 Identities=19% Similarity=0.036 Sum_probs=86.6
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhh
Q 007555 427 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 506 (598)
Q Consensus 427 lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~ 506 (598)
.++...++|..-++.-++=++|-+.++.+.+|+++.+....... .+.++ +....+..+.+...... ++.|++=+.
T Consensus 76 l~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~-~w~~~--~~~~~~~~s~~~~ialr-~llGl~es~- 150 (495)
T KOG2533|consen 76 LKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGI-LWGLF--GFLTAAVHSFPGLIALR-FLLGLFESG- 150 (495)
T ss_pred cchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHH-HHHHH--HHHHHHHhhhHHHHHHH-HHHHHHhcc-
Confidence 57778899999999999999999999999999996554332211 11111 11111111111011111 222332221
Q ss_pred hhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHH-HHHHHhhhhc-----cCcchhHHH-HHHHHHHHHHHHHHHHH
Q 007555 507 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAIIA-----NDVSHFGFL-ATLSLLSVVGAAWMFCH 579 (598)
Q Consensus 507 Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~-ll~~~~~i~~-----~~~~~f~~l-~l~S~~~V~~a~~l~~~ 579 (598)
| =.+...++...-.+++||..+|+..+-+++.. +++++...+. ......+|. ++-++..+..+.+.|+.
T Consensus 151 ~----wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~ 226 (495)
T KOG2533|consen 151 G----WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFF 226 (495)
T ss_pred c----chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEE
Confidence 2 24667888999999999999999998777774 3444443322 223344444 44455555555555544
Q ss_pred HhcCCc
Q 007555 580 WLLNPT 585 (598)
Q Consensus 580 ~l~~~~ 585 (598)
.-.+|.
T Consensus 227 lp~~P~ 232 (495)
T KOG2533|consen 227 LPDNPS 232 (495)
T ss_pred ecCChh
Confidence 333443
No 256
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=69.31 E-value=2e+02 Score=32.45 Aligned_cols=120 Identities=23% Similarity=0.194 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHHHHHcccccceeeccC----CchHHHHHHHHHHHHHHHHHHHHHHHHhh----hccCCccchHHHHHH
Q 007555 182 LPVAVMGFFSKLILIVGGPLVGKLMDHS----PRIPAYICLNTVQAAAQLLSAAMIIHAHT----VIPTSSSMLLHPWFF 253 (598)
Q Consensus 182 l~~av~~~~~~Lp~lL~gp~aGvlvDR~----~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~----~~~~~~~~l~~~l~v 253 (598)
-++++.-.+.-+..++..|.+|.+-||. .|||=.+.+-. ..++++..++.++.. .++.. ..-...+-+
T Consensus 67 k~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s---~~i~~~l~Lig~aaDig~~lgd~~-~~~~~~rai 142 (498)
T KOG0637|consen 67 KWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGS---LLIAVSLFLIGYAADIGLLLGDNE-RKPVKPRAI 142 (498)
T ss_pred ccccccccccccccceecccccccccccccccccccchHHHhh---HHHHHHHhhhhhHhhhhHHhcCCc-ccccchHHH
Confidence 3567777777788899999999999986 46664443321 122223223233211 11111 100112334
Q ss_pred HHHHHHHHHHHHhhhh----hh--hccccceeeecCCCchhHHHHHHHHHHHHHHHHHHhhHHHHH
Q 007555 254 VLVLAGAVERLTGVAL----GV--AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFG 313 (598)
Q Consensus 254 v~~llg~i~~l~~~a~----~~--aIerdwvp~Iv~~~~~~~L~~aNa~l~~id~~~~i~GP~lgG 313 (598)
+++++|. .+.+.|+ .+ +..-| ++..| ++-++||+.-..-+.+.+.+|=.+|+
T Consensus 143 ~~~~lg~--~LLD~A~n~~qgp~ra~L~D----l~~~d--~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 143 VLFILGF--WLLDVANNTLQGPCRALLAD----LARGD--AKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHHh--HHHHhhhhhhhhhHHHHHHH----hccCh--hhhhccchhHHHHHHhcceeeeeccc
Confidence 4433332 2222222 11 22233 55543 34555999999999999999988887
No 257
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=66.50 E-value=13 Score=42.37 Aligned_cols=52 Identities=23% Similarity=0.341 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 007555 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA 467 (598)
Q Consensus 416 f~~l~~~yl~~lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~ 467 (598)
...++.+|.+++|+++.++|.+.+.--+-++++.-+++.+.+|+...|..+.
T Consensus 30 l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lll 81 (618)
T KOG3762|consen 30 LFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLL 81 (618)
T ss_pred cchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhH
Confidence 3457888999999999999999999999999999999999999876665543
No 258
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=65.13 E-value=20 Score=40.30 Aligned_cols=148 Identities=14% Similarity=0.066 Sum_probs=86.3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH-Hhh---cccccchhHHHHHHHHHH
Q 007555 428 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV-YWS---GSLSQQNPLLFFLCLIVL 503 (598)
Q Consensus 428 g~s~~~iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~-~~~---g~~~~~~~~~~~~~~i~l 503 (598)
++++...+.+.++.-+|-+.|=+.++++..|+|..+.....+. .+++|... ..+ +++......+.+.=..
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~li----ImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~-- 153 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELI----IMIICSALSGLSVGTTSPLGVMMTLCFFRFL-- 153 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHH----HHHHHHHHhccCCCCCCCcchhhHHHHHHHH--
Confidence 3788899999999999999999999999999998765443222 12222221 111 1110011111110011
Q ss_pred Hhhhhhhhhh-hhhhhhhccCCCccchhHHHHHHHHHHHHHHHHHHhhhh----c----cCc-----chhHHHHHHHHHH
Q 007555 504 SRLGHMSYDI-VGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAII----A----NDV-----SHFGFLATLSLLS 569 (598)
Q Consensus 504 sr~Gl~~fdl-~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~~i~----~----~~~-----~~f~~l~l~S~~~ 569 (598)
.++|.- -|= ...++.-|.--+..||...+...++|..-.+.+-+.+++ + +.+ -+.-|-.++.++.
T Consensus 154 LGiGIG-GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~ 232 (538)
T KOG0252|consen 154 LGIGIG-GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGA 232 (538)
T ss_pred hhcccc-CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHH
Confidence 112221 233 344566777777888888777777766554433333322 1 221 2345668899999
Q ss_pred HHHHHHHHHHHhc
Q 007555 570 VVGAAWMFCHWLL 582 (598)
Q Consensus 570 V~~a~~l~~~~l~ 582 (598)
|-...++|.|+.-
T Consensus 233 vpa~~~ly~Rl~M 245 (538)
T KOG0252|consen 233 VPALLVLYFRLKM 245 (538)
T ss_pred HHHHHHHHhhhcC
Confidence 9998899988843
No 259
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=62.01 E-value=2.7e+02 Score=31.36 Aligned_cols=120 Identities=9% Similarity=-0.072 Sum_probs=70.8
Q ss_pred ChhHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhHHHHHHHHHHHHH-HHHHHHHHhhccc---------------cc--
Q 007555 430 NPSIIGGFSGLCASMGVAA-TFLSAYLVRRLGILKAGAAGLIFQASL-LAMAVAVYWSGSL---------------SQ-- 490 (598)
Q Consensus 430 s~~~iG~~~g~gavgGLlG-tl~~~~l~rrlg~~r~g~~~l~~q~~~-L~~~v~~~~~g~~---------------~~-- 490 (598)
++..+.++-....+-+.+. +.++.++.+|++..+..-+...+-..+ ++.+...+ +... +.
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~-p~~~~~~p~~~~~~~~~~~~~~~ 119 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIY-PLSDLLHPTALADKLLSLLPPGF 119 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHh-cchhhcCCcHHHHHHHhhcchhh
Confidence 4467888888777776666 888999999999877655433322222 22222211 1100 00
Q ss_pred --------chhHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHHHHHH-HHhhhh
Q 007555 491 --------QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVAII 552 (598)
Q Consensus 491 --------~~~~~~~~~~i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~-~~~~i~ 552 (598)
.+..-+| -+...-.|..+..+...+..-+.+..++-.|..+.....+++.-+.+ .....+
T Consensus 120 ~~~i~~~~~W~~~~F--Yv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 120 MGFIAILRIWSFALF--YVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000011 12223334444555667889999999999999999999999886444 343433
No 260
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism]
Probab=59.38 E-value=2e+02 Score=32.23 Aligned_cols=103 Identities=20% Similarity=0.142 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhhhhh
Q 007555 438 SGLCASMGVAATFLSAYLVRRLGILKAGAAGL-IFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGA 516 (598)
Q Consensus 438 ~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l-~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl~~~ 516 (598)
++.|.+.|+.|+++.-++.+|+..- .|+..+ .....++..+++-+.-|+- -+.++++|
T Consensus 194 ~glG~l~G~~gg~l~~~~Inr~nLd-~GL~pil~la~~Ll~fs~t~aiGGsG----~LaVYl~G---------------- 252 (574)
T COG3263 194 FGLGLLLGLGGGKLLLQLINRINLD-SGLYPILALAGGLLIFSLTGAIGGSG----ILAVYLAG---------------- 252 (574)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhcCcc----cHHHHHHH----------------
Confidence 4788889999999999999998764 333211 1111122222222111210 11122222
Q ss_pred hhhhccCCCccchhHHHHHHHHHHHHHHHHHHhhhhccCcchhHHH
Q 007555 517 QILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFL 562 (598)
Q Consensus 517 ~l~Q~~VP~~~rGRV~sv~~sl~~~~~ll~~~~~i~~~~~~~f~~l 562 (598)
++--+.|-..|--+.....-+++++.++++.+--+.-.|+++.-.
T Consensus 253 -ll~GN~~i~~r~~I~~f~dG~twlaQI~MFlvLGLLvtPsql~~i 297 (574)
T COG3263 253 -LLLGNRPIRARHGILRFFDGLAWLAQILMFLVLGLLVTPSQLLPI 297 (574)
T ss_pred -HHhCCCcchhHHHHHHHhccHHHHHHHHHHHHHHHhcCHhhhhHh
Confidence 233344667777888888899999998888874455777777653
No 261
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=57.63 E-value=2.5e+02 Score=30.89 Aligned_cols=61 Identities=16% Similarity=0.142 Sum_probs=34.2
Q ss_pred HHHHhhhhhhhhhhhhhhhhccC---CCccchhHHHHHHHHHHHHHHHH-HHhhhhccCcchhHHH
Q 007555 501 IVLSRLGHMSYDIVGAQILQTGI---PSSKANLIGTTEISVASLVESVM-LGVAIIANDVSHFGFL 562 (598)
Q Consensus 501 i~lsr~Gl~~fdl~~~~l~Q~~V---P~~~rGRV~sv~~sl~~~~~ll~-~~~~i~~~~~~~f~~l 562 (598)
+.++.+|....|+....+.=|.. |++ +|...+......+...+++ +..|.+.+..+.....
T Consensus 93 l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f 157 (433)
T PF03092_consen 93 LFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVF 157 (433)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEe
Confidence 44455677777887765544443 333 7887777666666554444 3445555554443333
No 262
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=51.75 E-value=2.2e+02 Score=27.06 Aligned_cols=95 Identities=11% Similarity=0.025 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhhhhhhhh
Q 007555 434 IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDI 513 (598)
Q Consensus 434 iG~~~g~gavgGLlGtl~~~~l~rrlg~~r~g~~~l~~q~~~L~~~v~~~~~g~~~~~~~~~~~~~~i~lsr~Gl~~fdl 513 (598)
.++..+..++ ..+..|.+.+++|..++..++...- ..-....+.+. ...++. +-++.++|...+-.
T Consensus 43 lai~Y~~~~~----s~l~~P~iv~~lg~K~sm~lg~~~y---~~y~~~~~~~~-----~~~l~~--~s~l~G~~~a~lW~ 108 (156)
T PF05978_consen 43 LAILYGSFAI----SCLFAPSIVNKLGPKWSMILGSLGY---AIYIASFFYPN-----SYTLYP--ASALLGFGAALLWT 108 (156)
T ss_pred HHHHHHHHHH----HHHhHHHHHHHHhhHHHHHHHHHHH---HHHHHHHHhhh-----HHHHHH--HHHHHhhhhHHhhH
Confidence 3444444443 4566788889999877666543211 11111112211 112222 12223333334445
Q ss_pred hhhhhhhccCCCccchhHHHHHHHHHHHH
Q 007555 514 VGAQILQTGIPSSKANLIGTTEISVASLV 542 (598)
Q Consensus 514 ~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~ 542 (598)
.+..++=+..+++.+||-.|+.-++....
T Consensus 109 aqg~ylt~~s~~~~~~~~~~ifw~i~~~s 137 (156)
T PF05978_consen 109 AQGTYLTSYSTEETIGRNTGIFWAIFQSS 137 (156)
T ss_pred hhhHHHHHcCCHHHHhhHHHHHHHHHHHH
Confidence 66666767778899999988877776644
No 263
>COG4232 Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]
Probab=37.28 E-value=2.9e+02 Score=31.89 Aligned_cols=21 Identities=38% Similarity=0.762 Sum_probs=15.0
Q ss_pred HHHHHHhcCCchHHHHHHHHH
Q 007555 388 LGWKEYMQQPVLPASLAYVLL 408 (598)
Q Consensus 388 eG~~~~~~~pvll~~l~~~lL 408 (598)
-+|..-++||.+...++..++
T Consensus 236 l~~q~qLQ~P~vl~~la~lf~ 256 (569)
T COG4232 236 LGWQAQLQQPWVLGGLAALFV 256 (569)
T ss_pred chhhHhHcccHHHHHHHHHHH
Confidence 367888999998876655433
No 264
>PF09925 DUF2157: Predicted membrane protein (DUF2157); InterPro: IPR018677 This family of various hypothetical prokaryotic proteins has no known function.
Probab=33.61 E-value=3.9e+02 Score=24.71 Aligned_cols=81 Identities=14% Similarity=0.077 Sum_probs=46.4
Q ss_pred CCChhhhhhhccCCC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeecc
Q 007555 130 VLSEEEQNALAATPA-HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDH 208 (598)
Q Consensus 130 ~~~~~~~~~~~~~~~-r~r~f~~L~~gq~lS~~G~~i~~fAlpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR 208 (598)
++++|++++..+.-. +++.-. |..+.+..+|--..-.++-++++.-+.+.-..+=+++.... ++.+-..|.+.=|
T Consensus 9 lI~~~q~~~i~~~~~~~~~~~~--~~~~~l~~lGall~~~gii~fvA~nW~~i~~~~k~~~~~~~--~~~~~~~~~~~~~ 84 (145)
T PF09925_consen 9 LITPEQAEAILAFYGERPSRSS--WLARILLYLGALLLGLGIILFVAANWDDIPRLAKLGLLLAL--LLLSYVGGFWLWR 84 (145)
T ss_pred CCCHHHHHHHHHHhhccccchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH--HHHHHHHHHHHHh
Confidence 556666555543222 111111 78888889999999999999998888754444444443222 3444445555433
Q ss_pred CCchHH
Q 007555 209 SPRIPA 214 (598)
Q Consensus 209 ~~Rr~v 214 (598)
-+++++
T Consensus 85 ~~~~~~ 90 (145)
T PF09925_consen 85 RRSPRL 90 (145)
T ss_pred ccCcHH
Confidence 333333
No 265
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=29.67 E-value=2.6e+02 Score=23.92 Aligned_cols=52 Identities=21% Similarity=0.025 Sum_probs=42.0
Q ss_pred HHHHHHHHcCChhHHHHHHHHHHHHHHHcccccceeeccCCchHHHHHHHHH
Q 007555 170 WPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (598)
Q Consensus 170 lpL~v~~lt~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~vmi~~d~~ 221 (598)
+|..+.+..=|....+..+.+..+-+++-++.+..+.+|.+++++++.+-+.
T Consensus 15 LP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~ 66 (85)
T PF06779_consen 15 LPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLL 66 (85)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 4555544444999999999999999999999999999998888887766543
No 266
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=29.44 E-value=2e+02 Score=32.34 Aligned_cols=74 Identities=12% Similarity=0.092 Sum_probs=57.9
Q ss_pred HHHHhhhhhhhhhhhhhhhhccCCCccchhHHHHHHHHHHHH-HHHHHHhhhhccCcchhHHHHHHHHHHHHHHH
Q 007555 501 IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV-ESVMLGVAIIANDVSHFGFLATLSLLSVVGAA 574 (598)
Q Consensus 501 i~lsr~Gl~~fdl~~~~l~Q~~VP~~~rGRV~sv~~sl~~~~-~ll~~~~~i~~~~~~~f~~l~l~S~~~V~~a~ 574 (598)
+.+..+|+-+|+...+.+-|..+|..+=|...|....+.... .+++.++|++.++...|+-..++.......+.
T Consensus 272 ~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~ 346 (480)
T KOG2563|consen 272 AICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGT 346 (480)
T ss_pred HHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 444556677888888888889999988876667667666666 46788889999999999999888877766653
No 267
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.
Probab=28.82 E-value=81 Score=32.07 Aligned_cols=54 Identities=13% Similarity=0.259 Sum_probs=33.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhccCcc-------hhHHHHHHHHHHHHHHHHHHHHH
Q 007555 527 KANLIGTTEISVASLVESVMLGVAIIANDVS-------HFGFLATLSLLSVVGAAWMFCHW 580 (598)
Q Consensus 527 ~rGRV~sv~~sl~~~~~ll~~~~~i~~~~~~-------~f~~l~l~S~~~V~~a~~l~~~~ 580 (598)
.+++++-....++.+|.|++++.|+++=+.. .+++..++.++.++..+++...|
T Consensus 229 ~~n~~m~~LT~~t~iflPlt~i~g~fGMN~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~ 289 (292)
T PF01544_consen 229 RQNRVMKVLTIVTAIFLPLTFITGIFGMNFKGMPELDWPYGYFFVIILGLMILVAILLYWW 289 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTS-SS---SSSSSS-SHHH--HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCccCCCccCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 3888888999999999888999988876544 44445553344333333333333
No 268
>PRK03612 spermidine synthase; Provisional
Probab=27.32 E-value=9.6e+02 Score=27.28 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=23.4
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007555 427 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRR 458 (598)
Q Consensus 427 lg~s~~~iG~~~g~gavgGLlGtl~~~~l~rr 458 (598)
.|-+...++.+.++...|.-+|+++.+++.++
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 57777777777777777777788877777543
No 269
>PF13955 Fst_toxin: Toxin Fst, type I toxin-antitoxin system; PDB: 2KV5_A.
Probab=25.86 E-value=75 Score=20.12 Aligned_cols=17 Identities=18% Similarity=0.515 Sum_probs=13.2
Q ss_pred HHHhhHHHHHHHHhhhc
Q 007555 304 CEIAGASLFGILLSKYE 320 (598)
Q Consensus 304 ~~i~GP~lgGlL~s~~~ 320 (598)
..+++|.+.|.++..++
T Consensus 2 ~~iIaPi~VGvvl~l~~ 18 (21)
T PF13955_consen 2 TTIIAPIVVGVVLTLFD 18 (21)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred ceehhhHHHHHHHHHHH
Confidence 46899999998877543
No 270
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=25.51 E-value=4.6e+02 Score=24.86 Aligned_cols=63 Identities=13% Similarity=-0.037 Sum_probs=36.1
Q ss_pred HHHcccccceeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchHHHHHHHHHHHHHHHHHHhhhhhh
Q 007555 195 LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 271 (598)
Q Consensus 195 ~lL~gp~aGvlvDR~~Rr~vmi~~d~~q~~~v~ls~~~l~~~~~~~~~~~~~l~~~l~vv~~llg~i~~l~~~a~~~ 271 (598)
..+.+++++.++++.+.|+.|+.+-+.-..- ....... . .+.++...+++|....+.-+++..
T Consensus 50 ~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y--------~~~~~~~----~--~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 50 FAISCLFAPSIVNKLGPKWSMILGSLGYAIY--------IASFFYP----N--SYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred HHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH--------HHHHHhh----h--HHHHHHHHHHHhhhhHHhhHhhhH
Confidence 3444555666789999999888765432111 1111111 1 244566667778777777766643
No 271
>TIGR02973 nitrate_rd_NapE periplasmic nitrate reductase, NapE protein. NapE, homologous to TorE (TIGR02972), is a membrane protein of unknown function that is part of the periplasmic nitrate reductase system; it may be part of the enzyme complex. The periplasmic nitrate reductase allows for nitrate respiration in anaerobic conditions.
Probab=24.56 E-value=1.1e+02 Score=22.91 Aligned_cols=31 Identities=29% Similarity=0.415 Sum_probs=24.7
Q ss_pred HHHHHHcC--ChhHHHHHHHHHHHHHHHccccc
Q 007555 172 SAIALLHP--SLLPVAVMGFFSKLILIVGGPLV 202 (598)
Q Consensus 172 L~v~~lt~--S~l~~av~~~~~~Lp~lL~gp~a 202 (598)
.+...+.| |...+|.|+++.+..++++||++
T Consensus 10 fl~~~l~PiLsV~~V~~YGF~vWm~Q~~~GpPg 42 (42)
T TIGR02973 10 FLAAVIWPVLSVITVGGYGFAVWMYQILAGPPG 42 (42)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34455566 77789999999999999999974
No 272
>PF06796 NapE: Periplasmic nitrate reductase protein NapE; InterPro: IPR010649 This family consists of several bacterial periplasmic nitrate reductase NapE proteins. Seven genes, napKEFDABC, encoding the periplasmic nitrate reductase system were cloned from the denitrifying phototrophic bacterium Rhodobacter sphaeroides. NapE is thought to be a transmembrane protein [].
Probab=24.32 E-value=99 Score=24.50 Aligned_cols=29 Identities=28% Similarity=0.335 Sum_probs=23.1
Q ss_pred HHHHcC--ChhHHHHHHHHHHHHHHHccccc
Q 007555 174 IALLHP--SLLPVAVMGFFSKLILIVGGPLV 202 (598)
Q Consensus 174 v~~lt~--S~l~~av~~~~~~Lp~lL~gp~a 202 (598)
+..+.| +...+|.|+++.+.-++++||++
T Consensus 25 ~~~l~PiL~v~~Vg~YGF~VWm~Q~~~GpPg 55 (56)
T PF06796_consen 25 AVVLFPILAVAFVGGYGFIVWMYQIFFGPPG 55 (56)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 344455 66779999999999999999975
No 273
>TIGR02972 TMAO_torE trimethylamine N-oxide reductase system, TorE protein. Members of this small, apparent transmembrane protein are designated TorE and occur in operons for the trimethylamine N-oxide (TMAO) reductase system. Members are closely related to the NapE protein of the related periplasmic nitrate reductase system. It may be that TorE is an integral membrane subunit of a complex with the reductase TorA.
Probab=24.02 E-value=1.1e+02 Score=23.45 Aligned_cols=30 Identities=30% Similarity=0.418 Sum_probs=24.2
Q ss_pred HHHHHcC--ChhHHHHHHHHHHHHHHHccccc
Q 007555 173 AIALLHP--SLLPVAVMGFFSKLILIVGGPLV 202 (598)
Q Consensus 173 ~v~~lt~--S~l~~av~~~~~~Lp~lL~gp~a 202 (598)
++..+.| |...+|.|+++.+..++++||++
T Consensus 16 l~v~l~PiLsV~~Vg~YGF~vWm~Q~~~GpPg 47 (47)
T TIGR02972 16 IIVVLFPILSVAGIGGYGFIIWMIQAFGGVPG 47 (47)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3455566 77789999999999999999874
No 274
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=22.96 E-value=71 Score=36.08 Aligned_cols=72 Identities=19% Similarity=0.099 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------cCChhHHHHHHHHHHHHHHHcccccceeeccCCchHH
Q 007555 148 GLYALYACCLAGNLVEQLWNFAWPSAIALL-------------HPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPA 214 (598)
Q Consensus 148 ~f~~L~~gq~lS~~G~~i~~fAlpL~v~~l-------------t~S~l~~av~~~~~~Lp~lL~gp~aGvlvDR~~Rr~v 214 (598)
.|..+-+ .-+..+-|.=-.|.+.+..-.+ +||... +.+..+..+-.++-.++-|.+.||+.||++
T Consensus 39 ~fk~i~i-AG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~-~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 39 HFKAIII-AGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVL-ALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHH-hhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHH-HHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 3544433 3455666777777766653221 223333 344444566678888899999999999999
Q ss_pred HHHHHHH
Q 007555 215 YICLNTV 221 (598)
Q Consensus 215 mi~~d~~ 221 (598)
+-.+-++
T Consensus 117 YG~~liI 123 (538)
T KOG0252|consen 117 YGKELII 123 (538)
T ss_pred hhHHHHH
Confidence 8766543
No 275
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=21.35 E-value=2.5e+02 Score=29.36 Aligned_cols=48 Identities=19% Similarity=0.287 Sum_probs=35.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhhccCcc-------hhHHHHHHHHHHHHHH
Q 007555 526 SKANLIGTTEISVASLVESVMLGVAIIANDVS-------HFGFLATLSLLSVVGA 573 (598)
Q Consensus 526 ~~rGRV~sv~~sl~~~~~ll~~~~~i~~~~~~-------~f~~l~l~S~~~V~~a 573 (598)
+.+++++-....++.+|.+..++.|+.+=+.+ .+||++++++..+.++
T Consensus 252 ~~~N~~mk~LTvvt~IflP~t~IaGiyGMNf~~mP~l~~~~gy~~~l~~m~~i~~ 306 (318)
T TIGR00383 252 NKMNEIMKILTVVSTIFIPLTFIAGIYGMNFKFMPELNWKYGYPAVLIVMAVIAL 306 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCccccchhHHHHHHHHHHHHHH
Confidence 46678888889999999888898888874432 4677766666655554
No 276
>COG4132 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=20.38 E-value=6e+02 Score=25.97 Aligned_cols=33 Identities=36% Similarity=0.603 Sum_probs=18.3
Q ss_pred HHHHHHhcC---CchHHHHHHHH--HHHHhhhhhhHHHHHHH
Q 007555 388 LGWKEYMQQ---PVLPASLAYVL--LCLNVVLTPGSLMTAFL 424 (598)
Q Consensus 388 eG~~~~~~~---pvll~~l~~~l--L~~~vll~f~~l~~~yl 424 (598)
.||. |||+ |++.+++.... ++-| .|++..+.|.
T Consensus 187 ~~~q-YWrmva~PiL~PsllGt~vlLfAN---AfGA~ATaya 224 (282)
T COG4132 187 TGWQ-YWRMVALPILWPSLLGTFVLLFAN---AFGAYATAYA 224 (282)
T ss_pred chHH-HHHHHHHHHhhHHHHHHHHHHHHH---HHhHHHHHHH
Confidence 4777 4444 77777765433 3333 3666666654
Done!