Query 007558
Match_columns 598
No_of_seqs 177 out of 867
Neff 7.2
Searched_HMMs 46136
Date Thu Mar 28 12:15:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007558.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007558hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 3E-134 7E-139 1107.6 57.3 584 13-597 15-607 (612)
2 PLN02247 indole-3-acetic acid- 100.0 4E-130 9E-135 1077.5 55.6 579 17-596 8-603 (606)
3 PLN02249 indole-3-acetic acid- 100.0 2E-124 5E-129 1041.5 57.2 591 1-597 1-596 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 1E-111 3E-116 938.9 43.5 515 22-574 2-528 (528)
5 COG1541 PaaK Coenzyme F390 syn 100.0 1.7E-30 3.6E-35 276.3 24.7 396 25-570 14-435 (438)
6 TIGR03335 F390_ftsA coenzyme F 100.0 2.9E-27 6.3E-32 259.4 23.7 394 27-546 7-431 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.9 4.4E-24 9.6E-29 232.4 30.0 386 31-546 6-410 (422)
8 TIGR02304 aden_form_hyp probab 99.9 2.1E-20 4.5E-25 202.9 26.4 315 31-490 22-375 (430)
9 COG1021 EntE Peptide arylation 99.6 1.5E-15 3.3E-20 157.0 10.0 135 303-459 303-459 (542)
10 PRK00174 acetyl-CoA synthetase 99.5 5.2E-11 1.1E-15 136.6 31.9 229 307-581 369-634 (637)
11 PTZ00237 acetyl-CoA synthetase 99.4 3.3E-11 7.2E-16 138.6 28.8 131 305-459 380-537 (647)
12 TIGR02188 Ac_CoA_lig_AcsA acet 99.4 1.2E-10 2.7E-15 133.1 33.2 250 277-578 337-624 (625)
13 PRK06334 long chain fatty acid 99.4 8.2E-12 1.8E-16 140.4 22.8 152 277-459 280-455 (539)
14 PRK05605 long-chain-fatty-acid 99.4 7E-11 1.5E-15 133.4 27.3 151 277-458 317-489 (573)
15 PRK07529 AMP-binding domain pr 99.4 1.2E-10 2.5E-15 133.7 27.8 134 306-458 334-489 (632)
16 PRK07788 acyl-CoA synthetase; 99.4 9E-11 2E-15 131.9 26.4 128 307-458 325-471 (549)
17 PRK06060 acyl-CoA synthetase; 99.4 1.4E-10 2.9E-15 134.8 28.5 130 307-459 262-410 (705)
18 PLN02654 acetate-CoA ligase 99.4 5.3E-10 1.2E-14 129.1 33.0 249 277-578 376-662 (666)
19 PRK04319 acetyl-CoA synthetase 99.4 2.2E-10 4.9E-15 129.4 27.7 129 307-459 325-477 (570)
20 PLN02574 4-coumarate--CoA liga 99.4 1.9E-10 4.2E-15 129.8 27.0 132 307-458 321-474 (560)
21 PRK06187 long-chain-fatty-acid 99.4 2.6E-10 5.6E-15 126.3 27.0 150 276-458 261-439 (521)
22 PRK07514 malonyl-CoA synthase; 99.4 2.8E-10 6E-15 126.0 27.2 129 307-458 271-421 (504)
23 PRK13295 cyclohexanecarboxylat 99.4 1.7E-10 3.6E-15 129.8 25.6 128 307-458 314-463 (547)
24 PRK10524 prpE propionyl-CoA sy 99.3 5.5E-10 1.2E-14 127.8 30.0 131 305-458 355-517 (629)
25 PRK06155 crotonobetaine/carnit 99.3 1E-10 2.3E-15 131.5 22.9 128 307-458 296-444 (542)
26 PRK05677 long-chain-fatty-acid 99.3 9.6E-11 2.1E-15 132.2 22.2 128 307-458 328-477 (562)
27 PRK09274 peptide synthase; Pro 99.3 1.8E-10 3.9E-15 129.4 24.1 161 277-459 269-465 (552)
28 TIGR03205 pimA dicarboxylate-- 99.3 5E-10 1.1E-14 125.6 27.1 130 307-458 314-465 (541)
29 TIGR02316 propion_prpE propion 99.3 1.8E-09 3.8E-14 123.8 31.3 131 305-458 354-516 (628)
30 PRK07656 long-chain-fatty-acid 99.3 4.2E-10 9E-15 124.7 25.2 150 276-458 261-436 (513)
31 PRK07638 acyl-CoA synthetase; 99.3 1.7E-10 3.6E-15 127.6 21.9 129 307-458 256-405 (487)
32 PRK03584 acetoacetyl-CoA synth 99.3 3.1E-09 6.7E-14 122.4 32.6 231 303-578 381-648 (655)
33 TIGR02275 DHB_AMP_lig 2,3-dihy 99.3 8E-10 1.7E-14 123.6 26.2 128 307-458 301-452 (527)
34 TIGR03208 cyc_hxne_CoA_lg cycl 99.3 8.7E-10 1.9E-14 123.6 26.2 127 307-458 312-461 (538)
35 PRK07867 acyl-CoA synthetase; 99.3 1.2E-09 2.6E-14 122.6 27.1 132 307-458 269-425 (529)
36 PRK06164 acyl-CoA synthetase; 99.3 1.1E-09 2.4E-14 122.7 26.7 110 328-458 319-450 (540)
37 PRK04813 D-alanine--poly(phosp 99.3 8.1E-10 1.7E-14 122.1 25.1 130 307-459 262-420 (503)
38 PRK07786 long-chain-fatty-acid 99.3 2E-09 4.4E-14 120.8 28.6 129 307-458 292-443 (542)
39 PLN03051 acyl-activating enzym 99.3 9.6E-10 2.1E-14 122.4 25.7 43 412-458 359-401 (499)
40 PRK13383 acyl-CoA synthetase; 99.3 1.5E-09 3.4E-14 121.0 27.3 128 307-458 294-440 (516)
41 PRK05852 acyl-CoA synthetase; 99.3 1.7E-09 3.7E-14 121.1 27.7 154 276-458 273-452 (534)
42 PRK09088 acyl-CoA synthetase; 99.3 1.8E-10 3.9E-15 127.2 19.4 127 307-458 254-405 (488)
43 PRK08314 long-chain-fatty-acid 99.3 1.9E-10 4.1E-15 128.9 19.7 130 307-459 307-461 (546)
44 PRK10946 entE enterobactin syn 99.3 2.9E-10 6.2E-15 127.6 21.1 128 307-458 302-453 (536)
45 TIGR01734 D-ala-DACP-lig D-ala 99.3 1.4E-09 3E-14 120.4 26.0 129 307-459 260-418 (502)
46 PRK06145 acyl-CoA synthetase; 99.3 2.4E-10 5.1E-15 126.5 19.7 130 307-459 266-418 (497)
47 COG0318 CaiC Acyl-CoA syntheta 99.3 2.5E-10 5.5E-15 128.4 19.9 154 275-459 269-446 (534)
48 PRK12492 long-chain-fatty-acid 99.3 3E-09 6.6E-14 120.1 28.6 128 307-458 335-485 (562)
49 TIGR01733 AA-adenyl-dom amino 99.3 2.5E-10 5.3E-15 122.6 18.9 148 276-458 217-399 (408)
50 PRK07470 acyl-CoA synthetase; 99.2 1.6E-09 3.6E-14 120.9 26.2 149 277-458 261-438 (528)
51 PLN02246 4-coumarate--CoA liga 99.2 1.7E-09 3.6E-14 121.3 26.0 130 307-458 300-456 (537)
52 COG0365 Acs Acyl-coenzyme A sy 99.2 2.3E-09 4.9E-14 119.2 26.3 131 303-459 288-441 (528)
53 PLN02860 o-succinylbenzoate-Co 99.2 2.5E-10 5.4E-15 128.9 19.2 143 307-458 290-458 (563)
54 PRK13382 acyl-CoA synthetase; 99.2 3E-09 6.5E-14 119.5 27.5 128 307-458 314-460 (537)
55 TIGR01217 ac_ac_CoA_syn acetoa 99.2 4.5E-09 9.9E-14 121.1 29.6 159 395-578 461-646 (652)
56 PRK12583 acyl-CoA synthetase; 99.2 2.6E-09 5.6E-14 120.0 26.8 129 307-458 319-472 (558)
57 PRK08316 acyl-CoA synthetase; 99.2 4.5E-10 9.8E-15 124.7 20.2 129 307-458 288-439 (523)
58 PRK08974 long-chain-fatty-acid 99.2 9E-10 1.9E-14 124.1 22.9 128 307-458 327-476 (560)
59 PLN02330 4-coumarate--CoA liga 99.2 1.6E-09 3.4E-14 121.8 24.7 128 307-458 305-461 (546)
60 PLN02736 long-chain acyl-CoA s 99.2 4.6E-10 1E-14 129.2 20.9 132 307-458 378-532 (651)
61 PRK06839 acyl-CoA synthetase; 99.2 1.8E-09 3.9E-14 119.2 24.7 127 307-458 266-415 (496)
62 PLN02614 long-chain acyl-CoA s 99.2 2.2E-10 4.8E-15 132.3 17.9 132 307-458 388-541 (666)
63 PRK08633 2-acyl-glycerophospho 99.2 6.4E-10 1.4E-14 135.5 22.9 130 307-459 900-1064(1146)
64 TIGR03098 ligase_PEP_1 acyl-Co 99.2 1E-09 2.2E-14 121.7 21.9 129 307-458 276-438 (515)
65 PRK07059 Long-chain-fatty-acid 99.2 7.8E-10 1.7E-14 124.5 21.1 129 306-458 328-479 (557)
66 PRK06710 long-chain-fatty-acid 99.2 3.1E-10 6.7E-15 128.0 17.6 130 307-459 325-476 (563)
67 PRK06188 acyl-CoA synthetase; 99.2 4.6E-09 1E-13 117.2 26.6 128 307-458 283-437 (524)
68 PRK12406 long-chain-fatty-acid 99.2 9.5E-09 2E-13 114.3 28.8 129 306-458 272-423 (509)
69 PRK12467 peptide synthase; Pro 99.2 6.7E-10 1.4E-14 149.6 22.8 129 307-458 3353-3515(3956)
70 PRK10252 entF enterobactin syn 99.2 3.8E-10 8.2E-15 139.4 18.9 129 307-459 719-882 (1296)
71 PRK07787 acyl-CoA synthetase; 99.2 1.4E-09 2.9E-14 120.0 20.5 129 307-458 243-395 (471)
72 KOG1176 Acyl-CoA synthetase [L 99.2 4.4E-09 9.6E-14 117.3 24.4 129 307-458 301-452 (537)
73 PRK08315 AMP-binding domain pr 99.2 7.6E-09 1.7E-13 116.3 25.7 130 307-458 317-471 (559)
74 TIGR03443 alpha_am_amid L-amin 99.2 7E-10 1.5E-14 138.1 18.9 136 307-458 531-722 (1389)
75 PRK08751 putative long-chain f 99.1 6.4E-10 1.4E-14 125.2 16.3 129 307-459 331-482 (560)
76 PLN02387 long-chain-fatty-acid 99.1 2.9E-09 6.4E-14 123.6 22.1 132 307-458 422-580 (696)
77 PRK12467 peptide synthase; Pro 99.1 2E-09 4.4E-14 145.0 23.4 148 277-458 754-934 (3956)
78 PRK07768 long-chain-fatty-acid 99.1 1.6E-08 3.5E-13 113.4 27.1 64 392-459 380-459 (545)
79 PLN02861 long-chain-fatty-acid 99.1 9.1E-10 2E-14 127.1 17.0 132 307-458 385-538 (660)
80 PLN03052 acetate--CoA ligase; 99.1 1.5E-08 3.2E-13 118.4 27.1 43 412-458 591-633 (728)
81 KOG1177 Long chain fatty acid 99.1 1.2E-09 2.6E-14 116.1 16.0 131 303-458 348-505 (596)
82 PRK06087 short chain acyl-CoA 99.1 3E-09 6.6E-14 119.4 20.3 127 307-458 304-454 (547)
83 PRK07769 long-chain-fatty-acid 99.1 2.5E-09 5.4E-14 122.6 19.9 64 391-459 411-508 (631)
84 PRK08043 bifunctional acyl-[ac 99.1 2.2E-09 4.9E-14 125.0 19.6 125 307-459 481-636 (718)
85 PRK08276 long-chain-fatty-acid 99.1 2.9E-08 6.3E-13 110.1 27.5 129 304-458 261-413 (502)
86 PTZ00342 acyl-CoA synthetase; 99.1 2.3E-09 5.1E-14 125.0 19.5 130 307-458 463-615 (746)
87 KOG1175 Acyl-CoA synthetase [L 99.1 1.1E-08 2.5E-13 114.4 24.0 253 277-580 338-624 (626)
88 PRK13388 acyl-CoA synthetase; 99.1 4.5E-09 9.8E-14 118.2 21.2 136 307-458 267-424 (540)
89 PRK03640 O-succinylbenzoic aci 99.1 1.4E-08 3E-13 111.9 24.5 147 276-458 235-404 (483)
90 PRK13391 acyl-CoA synthetase; 99.1 4E-08 8.7E-13 109.4 27.9 127 307-458 277-426 (511)
91 PRK08008 caiC putative crotono 99.1 1.6E-08 3.5E-13 112.5 24.7 128 307-458 290-442 (517)
92 PRK08279 long-chain-acyl-CoA s 99.1 3.7E-09 8.1E-14 120.3 19.3 140 307-458 316-483 (600)
93 PRK12316 peptide synthase; Pro 99.1 9.1E-09 2E-13 141.3 26.0 149 277-458 2243-2425(5163)
94 PRK05857 acyl-CoA synthetase; 99.1 5.1E-09 1.1E-13 117.7 19.2 154 277-458 267-446 (540)
95 PRK06178 acyl-CoA synthetase; 99.1 3.2E-08 6.8E-13 111.8 25.2 121 316-458 341-486 (567)
96 PRK13390 acyl-CoA synthetase; 99.1 2.7E-08 5.8E-13 110.4 24.2 127 307-458 272-423 (501)
97 PRK12316 peptide synthase; Pro 99.1 1.9E-09 4.1E-14 147.9 17.9 129 307-458 772-930 (5163)
98 TIGR02262 benz_CoA_lig benzoat 99.1 5.4E-08 1.2E-12 108.2 26.5 128 307-458 280-428 (508)
99 PRK07445 O-succinylbenzoic aci 99.1 1.5E-08 3.3E-13 111.6 21.9 60 395-458 298-368 (452)
100 PRK05850 acyl-CoA synthetase; 99.0 6.3E-08 1.4E-12 109.6 27.2 64 391-459 390-481 (578)
101 PRK05851 long-chain-fatty-acid 99.0 6.4E-09 1.4E-13 116.5 18.9 62 393-459 367-440 (525)
102 PLN03102 acyl-activating enzym 99.0 7.4E-09 1.6E-13 117.6 19.3 59 396-458 390-464 (579)
103 PRK08308 acyl-CoA synthetase; 99.0 5.6E-08 1.2E-12 105.4 24.0 58 395-458 278-335 (414)
104 PRK09192 acyl-CoA synthetase; 99.0 8.9E-08 1.9E-12 108.6 26.6 63 392-459 405-483 (579)
105 PRK05691 peptide synthase; Val 99.0 2.1E-08 4.6E-13 136.4 24.9 129 307-458 1390-1549(4334)
106 PRK05620 long-chain-fatty-acid 99.0 8.4E-08 1.8E-12 108.7 26.1 131 307-458 300-474 (576)
107 PLN02430 long-chain-fatty-acid 99.0 9.1E-09 2E-13 118.8 18.1 61 394-458 461-538 (660)
108 PRK05691 peptide synthase; Val 99.0 2.5E-08 5.3E-13 135.8 25.0 130 307-459 3985-4147(4334)
109 PRK12476 putative fatty-acid-- 99.0 7.7E-08 1.7E-12 110.0 25.1 64 391-459 422-520 (612)
110 PRK06814 acylglycerophosphoeth 99.0 1.4E-08 3E-13 124.1 19.9 124 307-458 909-1054(1140)
111 PF00501 AMP-binding: AMP-bind 99.0 5.7E-09 1.2E-13 112.6 14.0 115 307-443 279-417 (417)
112 TIGR01923 menE O-succinylbenzo 99.0 2.1E-08 4.6E-13 108.8 17.9 59 396-458 290-364 (436)
113 PRK07824 O-succinylbenzoic aci 99.0 1.7E-07 3.6E-12 99.6 24.3 44 411-459 235-278 (358)
114 PRK07798 acyl-CoA synthetase; 98.9 4E-08 8.7E-13 109.3 20.1 130 307-458 298-452 (533)
115 PRK07008 long-chain-fatty-acid 98.9 1.6E-08 3.5E-13 113.5 17.0 58 397-458 383-453 (539)
116 PRK08180 feruloyl-CoA synthase 98.9 2.9E-08 6.2E-13 113.6 18.2 63 396-458 409-491 (614)
117 COG1022 FAA1 Long-chain acyl-C 98.9 2.4E-08 5.3E-13 112.6 16.7 132 307-478 355-506 (613)
118 PTZ00216 acyl-CoA synthetase; 98.9 3.8E-08 8.1E-13 114.5 18.1 129 307-458 430-581 (700)
119 PRK12582 acyl-CoA synthetase; 98.9 3.1E-08 6.6E-13 113.6 15.6 60 394-453 419-496 (624)
120 PRK06018 putative acyl-CoA syn 98.8 3.3E-07 7.1E-12 103.0 21.2 58 397-458 383-454 (542)
121 PLN02479 acetate-CoA ligase 98.8 3E-07 6.5E-12 104.0 20.8 58 397-458 401-474 (567)
122 PRK08162 acyl-CoA synthetase; 98.8 4E-07 8.7E-12 102.1 21.1 58 397-458 387-460 (545)
123 KOG1256 Long-chain acyl-CoA sy 98.8 6E-08 1.3E-12 108.8 14.1 135 298-458 415-572 (691)
124 PRK09029 O-succinylbenzoic aci 98.7 6.3E-07 1.4E-11 98.4 17.4 43 411-458 333-375 (458)
125 PRK07868 acyl-CoA synthetase; 98.6 9.8E-07 2.1E-11 106.6 17.6 139 306-458 721-880 (994)
126 TIGR02372 4_coum_CoA_lig 4-cou 98.5 1.6E-06 3.4E-11 93.9 15.1 43 412-458 277-319 (386)
127 KOG1180 Acyl-CoA synthetase [L 98.2 0.00017 3.6E-09 78.9 21.7 143 307-480 404-574 (678)
128 PF04443 LuxE: Acyl-protein sy 98.1 0.00017 3.6E-09 77.4 18.7 79 34-126 30-115 (365)
129 KOG1179 Very long-chain acyl-C 97.7 0.00092 2E-08 73.5 15.2 232 307-567 359-623 (649)
130 COG1020 EntF Non-ribosomal pep 95.7 0.064 1.4E-06 61.6 11.2 63 392-458 561-640 (642)
131 PF14535 AMP-binding_C_2: AMP- 95.5 0.026 5.7E-07 48.7 5.5 84 444-546 1-84 (96)
132 PTZ00297 pantothenate kinase; 95.3 0.43 9.4E-06 59.9 17.1 54 398-458 825-881 (1452)
133 PRK09188 serine/threonine prot 89.9 0.4 8.6E-06 51.7 4.8 39 411-458 210-251 (365)
134 KOG1178 Non-ribosomal peptide 56.5 7.7 0.00017 47.1 2.7 44 412-459 456-499 (1032)
135 COG2139 RPL21A Ribosomal prote 43.8 18 0.00039 31.1 2.2 37 409-445 30-69 (98)
136 PRK04306 50S ribosomal protein 38.5 24 0.00052 30.7 2.2 37 409-445 32-71 (98)
137 cd04931 ACT_PAH ACT domain of 38.5 1.9E+02 0.0042 24.5 7.8 58 449-517 25-82 (90)
138 PTZ00189 60S ribosomal protein 37.3 25 0.00055 33.2 2.4 37 409-445 31-70 (160)
139 PF09926 DUF2158: Uncharacteri 35.9 35 0.00076 26.2 2.5 19 412-433 1-19 (53)
140 KOG1179 Very long-chain acyl-C 33.3 22 0.00048 40.2 1.5 30 394-423 484-519 (649)
141 COG5475 Uncharacterized small 32.2 51 0.0011 25.5 2.8 24 412-438 5-28 (60)
142 PLN00190 60S ribosomal protein 31.5 35 0.00076 32.2 2.3 38 409-446 31-71 (158)
143 PF11454 DUF3016: Protein of u 30.8 1E+02 0.0022 28.7 5.2 56 393-450 47-112 (141)
144 PF01797 Y1_Tnp: Transposase I 25.8 2.3E+02 0.0051 24.5 6.6 102 432-551 8-118 (121)
145 PF07311 Dodecin: Dodecin; In 23.1 2.4E+02 0.0052 22.7 5.3 49 445-494 13-62 (66)
146 cd04866 LigD_Pol_like_3 LigD_P 22.8 56 0.0012 32.7 2.1 50 95-145 121-172 (223)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=3.1e-134 Score=1107.62 Aligned_cols=584 Identities=66% Similarity=1.130 Sum_probs=548.4
Q ss_pred CCcccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCChhhHhcCCCCCCCHHHHhhcCCCcccccchHHHHHHHcCCC
Q 007558 13 TPLCEKDAKALRFIEEMTRNADPVQERVLAAILSRNGETEYLRRFNLDGATDRDTFKSKVPVVTYEDLQPEIQRIANGDR 92 (598)
Q Consensus 13 ~~~~~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~edf~~~vPl~~Yed~~p~ier~~~Ge~ 92 (598)
....+++++.++.+|..++|+.++|+++|++||+.|++|+|||+|||++|+++++||++|||++|||++|||+||++||.
T Consensus 15 ~~~~~~~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~~f~~i~~~~~F~~~VPv~~Yedl~pyI~Ri~~Ge~ 94 (612)
T PLN02620 15 YNLAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYEDIQPDINRIANGDT 94 (612)
T ss_pred CccccchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCC
Confidence 34456668889999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccCCccceeecccccCCCCcccccCChHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEecccccccCCCceeecc
Q 007558 93 SAILSSHPVSEFLTSSGTSAGERKLMPTIHEELDRRQLLFSLLMPVMNLYVPGLDKGKGLYFLFVKAETKTASGLLARPV 172 (598)
Q Consensus 93 ~~ll~~~pi~~f~~TSGTT~G~~K~IP~T~~~~~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~ 172 (598)
++|||++||.+|++|||||||++|+||+|+++++.+..++.+|+.++++.+|++..||.||+.+...+.+|++|||+|++
T Consensus 95 s~vL~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~~~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~ 174 (612)
T PLN02620 95 SPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGGLVARPV 174 (612)
T ss_pred CCccCCCChhhhhhcCCCCCCceeeeecCHHHHHHHHHHHHHHHHHHHhhCCCcccCcEEEEEecccCccCCCCcccccc
Confidence 89999999999999999998899999999999999888899999999998999999999999988889999999999999
Q ss_pred cccccccccccCCCCCCCccccCchhhhccCChhhHHHHHHHhhhccccceeEEEeccHHHHHHHHHHHHHHHHHHHHHH
Q 007558 173 LTSYYKSEQFKTRPYDPFNVYTSPDEAILCVDSFQSMYIQMLCGLIMREEVLRVGAVFASGLLRAIRFLQLNWKQLADDI 252 (598)
Q Consensus 173 s~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~dI 252 (598)
|+++++|..|+.++..+...|++|.+++.++|..|+|||||||+|.++++|..|+++|+++|+++++.|+++|++||+||
T Consensus 175 st~~y~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~~L~~DI 254 (612)
T PLN02620 175 LTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDI 254 (612)
T ss_pred cchhhhhhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcccCCCCCCChhhhhhhhhccCCCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCchhhhHHHHHhhcCCCCee
Q 007558 253 SAGTLNPNVTDPSIRKCMENILKPNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAMAQYIPTLDHYSGGLPLA 332 (598)
Q Consensus 253 ~~gt~~~~i~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~~y~~~l~~~~~g~~v~ 332 (598)
+.|+++++++++++|.++.+.|+|+|++|+.|+.+|.+.+|+|++++|||||++|+||++|+|++|.+.|+.|+||+|++
T Consensus 255 ~~G~ls~~itd~~~R~av~~~L~p~pelA~~i~~~c~~~~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~ 334 (612)
T PLN02620 255 RTGTIDSQITDPSVREAVMKILKPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLV 334 (612)
T ss_pred hcCCCCccCCCHHHHHHHHhhcCCCHHHHHHHHHHhccccccCcHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCccc
Confidence 99999999999999999999999999999999999999899999999999999999999999999999999999999999
Q ss_pred ccccccccccccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCC---------CCCCCCccccccccCCCCeEEEEE
Q 007558 333 CTMYASSECFFGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPL---------SPESPPRLVDLAHVQVGKQYELVV 403 (598)
Q Consensus 333 ~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~---------~~~~~~~~v~~~eve~G~~yelvv 403 (598)
+.+|+||||+||+|++|.|+++..+|+|+|+.+||||||+++.+... ++..+.++|+++||++|++|||||
T Consensus 335 ~~~Y~ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~Yelvv 414 (612)
T PLN02620 335 CTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVV 414 (612)
T ss_pred cccccccceEEEeccCCCCCcccceeeecCCcEEEEEeeccCcccccccccccccccccccCccccHHHccCCCeEEEEE
Confidence 99999999999999999999988999999999999999987532100 011234589999999999999999
Q ss_pred cccccccccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEeecCCCCC
Q 007558 404 TTYAGLNRYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYADTTTIP 483 (598)
Q Consensus 404 Tt~~GL~RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p 483 (598)
||++||||||+||||+|+||||++|+|+|++|.+.++|++|||++|++|..||.+|...|...+++|+|||+++|.+..|
T Consensus 415 Tt~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~dyts~~d~~~~P 494 (612)
T PLN02620 415 TTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSYADTSTIP 494 (612)
T ss_pred EecCceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcccCceeeeEEeccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999987766799999999999988999
Q ss_pred ceEEEEEEEeecccCCCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEeCCChHHHHHHHHHhcCCCCCCCCC
Q 007558 484 GHYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKA 563 (598)
Q Consensus 484 ~~Y~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtF~~~~~~~~~~G~~~~Q~K~ 563 (598)
|||+||||+...+. ..++++++++||..||++||.+|+.+|..+++|+|++|++|++|||++++++++++|++.+|||+
T Consensus 495 ghYvl~~El~~~~~-~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~~G~s~~QyK~ 573 (612)
T PLN02620 495 GHYVLFWELCLNGS-TPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKT 573 (612)
T ss_pred CceEEEEEEecCCC-CCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHHcCCccccccC
Confidence 99999999953221 23567899999999999999999999966556999999999999999999999999999999999
Q ss_pred CcccCCHhHHHHHhccccceeccCCCCCCCCCCC
Q 007558 564 PRCVSFTPILELLNGRVVSKHFSPAAPHWVPERR 597 (598)
Q Consensus 564 Pr~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 597 (598)
|||+++++++++|+++|+++|||+++|.|+|+++
T Consensus 574 Pr~v~~~~~~~~l~~~v~~~~~s~~~~~~~~~~~ 607 (612)
T PLN02620 574 PRCVKFAPIIELLNSRVVSNYFSPKCPKWVPGHK 607 (612)
T ss_pred ceEecCHHHHHHHHhhhheeeccccCCCCCcccc
Confidence 9999999999999999999999999999999865
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=4.3e-130 Score=1077.48 Aligned_cols=579 Identities=58% Similarity=1.042 Sum_probs=538.7
Q ss_pred cccHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCChhhHhcCCCCCCCHHHHhhcCCCcccccchHHHHHHHcCCCcccc
Q 007558 17 EKDAKALRFIEEMTRNADPVQERVLAAILSRNGETEYLRRFNLDGATDRDTFKSKVPVVTYEDLQPEIQRIANGDRSAIL 96 (598)
Q Consensus 17 ~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~edf~~~vPl~~Yed~~p~ier~~~Ge~~~ll 96 (598)
+++++.++.+|..++|+.++|+++|++||+.|++|+|||+|+| +|.+.++||++|||++|||++|||+||++|+.++++
T Consensus 8 ~~~~~~~~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~~~-~i~~~e~Fk~~VPv~~Yedl~pyI~Ri~~Ge~~~ll 86 (606)
T PLN02247 8 NDNEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLD-GESDKQSFKNKVPVVNYEDIKPCIERIANGESSSII 86 (606)
T ss_pred cchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhhhhcCc-cCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCcee
Confidence 3457889999999999999999999999999999999999855 899999999999999999999999999999986667
Q ss_pred cCCccceeecccccCCCCcccccCChHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEecccccccCCCceeecccccc
Q 007558 97 SSHPVSEFLTSSGTSAGERKLMPTIHEELDRRQLLFSLLMPVMNLYVPGLDKGKGLYFLFVKAETKTASGLLARPVLTSY 176 (598)
Q Consensus 97 ~~~pi~~f~~TSGTT~G~~K~IP~T~~~~~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~ 176 (598)
+++||.+|++|||||||++|+||+|+++++.+.+++.+|...+++..|++..||.||+.+..++..|++|||+|++++.+
T Consensus 87 t~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~l~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~~t~y 166 (606)
T PLN02247 87 SAQPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTSY 166 (606)
T ss_pred CCCCcceeeccCCCCCCceeEeeccHHHHHHHHHHHHHHHHHHHhcCCCcccCcEEEEEecCcCccCCCCcccccccchh
Confidence 89999999999999988999999999999998899999999999988999999999999888999999999999999999
Q ss_pred cccccccCCCCCCCccccCchhhhccCChhhHHHHHHHhhhccccceeEEEeccHHHHHHHHHHHHHHHHHHHHHHHccc
Q 007558 177 YKSEQFKTRPYDPFNVYTSPDEAILCVDSFQSMYIQMLCGLIMREEVLRVGAVFASGLLRAIRFLQLNWKQLADDISAGT 256 (598)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~gt 256 (598)
+++..|+.++..+...|++|.++++++|..|+|||||||+|.+++++..|+++|+++++++++.|+++|++||+||+.|+
T Consensus 167 ~~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~we~L~~DI~~G~ 246 (606)
T PLN02247 167 YKSSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTGC 246 (606)
T ss_pred hccccccccccccccceeCcHHhhcCCCHHHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999998887766789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhhhhhhhhcc-CCCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCchhhhHHHHHhhcCCCCeeccc
Q 007558 257 LNPNVTDPSIRKCMENIL-KPNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAMAQYIPTLDHYSGGLPLACTM 335 (598)
Q Consensus 257 ~~~~i~~~~~r~~l~~~l-~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~~y~~~l~~~~~g~~v~~~~ 335 (598)
++++++++++|.++.+.+ .|+|++|++|+.+|.+.+|.|++++|||||++|+||++|+|++|.+.|+.|+||+|+++.+
T Consensus 247 ls~~it~p~~R~a~~~~l~~p~peLA~~l~~~c~~~~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~ 326 (606)
T PLN02247 247 VSDWITDPSCRNAVSSILSKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTM 326 (606)
T ss_pred cccccCCHHHHHHHhhcccCCCHHHHHHHHHHhcccCccccHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceeccc
Confidence 999999999999999999 5999999999999998889999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCC------CC---C-----CCCCccccccccCCCCeEEE
Q 007558 336 YASSECFFGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPP------LS---P-----ESPPRLVDLAHVQVGKQYEL 401 (598)
Q Consensus 336 ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~------~~---~-----~~~~~~v~~~eve~G~~yel 401 (598)
|+||||+||+|++|.|+++...|+|+|+.+||||||.++.+.. .+ . ..++.+|+++||++|+.|||
T Consensus 327 Y~sSE~~~ginl~p~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~Yel 406 (606)
T PLN02247 327 YASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYEL 406 (606)
T ss_pred ccccceEEEeccCcCCCccCCceeecCCcEEEEEeecCCCcccccccccccccccccccccccCceecHHHccCCCeEEE
Confidence 9999999999999999988899999999999999997754210 00 0 11334999999999999999
Q ss_pred EEcccccccccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEeecCCC
Q 007558 402 VVTTYAGLNRYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYADTTT 481 (598)
Q Consensus 402 vvTt~~GL~RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~ 481 (598)
||||++||||||+||||+|+||||++|+|+|+||.+.++|++|||++|++++.||.+|...+++.++.++||++++|.++
T Consensus 407 VvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~d~ts~~d~~~ 486 (606)
T PLN02247 407 VVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTSS 486 (606)
T ss_pred EEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhcccCeeeeeeecccccCC
Confidence 99999999999999999999999999999999999999999999999999999999998777666899999999999888
Q ss_pred CCceEEEEEEEeecccC--CCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEeCCChHHHHHHHHHhcCCCCC
Q 007558 482 IPGHYVIFWELLVKDAA--NSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASIN 559 (598)
Q Consensus 482 ~p~~Y~l~~E~e~~~~~--~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtF~~~~~~~~~~G~~~~ 559 (598)
.||||+||||++..+.. ...+.+.+++||..||++||.+|+.+|..+|+|+|++|++|++|||++++++++++|++.+
T Consensus 487 ~PghYvlf~El~~~~~~~~~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~~igPLeirvv~~GtF~~l~~~~~~~G~s~~ 566 (606)
T PLN02247 487 IPGHYVLFWELKTRGSNDPPELDPKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVN 566 (606)
T ss_pred CCCceEEEEEeecCCCCccccchHHHHHHHHHHHHHHhhHHHHHHhhccCcCCCcEEEEeCCChHHHHHHHHHHcCCCcc
Confidence 99999999999632210 1235678999999999999999999996556999999999999999999999999999999
Q ss_pred CCCCCcccCCHhHHHHHhccccceeccCCCCCCCCCC
Q 007558 560 QYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPER 596 (598)
Q Consensus 560 Q~K~Pr~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 596 (598)
|||+|||+++++++++|+++||++|||+++|.|+|++
T Consensus 567 Q~K~Pr~v~~~~~~~~l~~~v~~~~~s~~~~~~~~~~ 603 (606)
T PLN02247 567 QYKTPRCIKSEEALKILDSRVIGRFFSKRVPFWEPFG 603 (606)
T ss_pred cccCceEecCHHHHHHHHhhhheeeccccCCCCCccc
Confidence 9999999999999999999999999999999999974
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=2.3e-124 Score=1041.49 Aligned_cols=591 Identities=73% Similarity=1.166 Sum_probs=534.8
Q ss_pred CCccCCCCCCCCCC-cccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCChhhHhcCCCCCCCHHHHhhcCCCccccc
Q 007558 1 MAIDSALPSPLGTP-LCEKDAKALRFIEEMTRNADPVQERVLAAILSRNGETEYLRRFNLDGATDRDTFKSKVPVVTYED 79 (598)
Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~edf~~~vPl~~Yed 79 (598)
|+.+|...|....+ ..++++..++.+|..++||+++|+++|++||+.|++|+|||+|||++|+++++||++|||++|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~gf~~i~~~~~F~~~VPv~~Yed 80 (597)
T PLN02249 1 MAVDSPLQSRMASPTTSEKDVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVTYED 80 (597)
T ss_pred CCcCchhhhhccCCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHH
Confidence 55555554443332 23344677899999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHcCCCcccccCCccceeecccccCCCCcccccCChHHHH--HHHHHHHHHHHHHhhcCCCCCCCceEEEEec
Q 007558 80 LQPEIQRIANGDRSAILSSHPVSEFLTSSGTSAGERKLMPTIHEELD--RRQLLFSLLMPVMNLYVPGLDKGKGLYFLFV 157 (598)
Q Consensus 80 ~~p~ier~~~Ge~~~ll~~~pi~~f~~TSGTT~G~~K~IP~T~~~~~--~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~ 157 (598)
++|||+|+++||.++|||++||.+|++|||||+|++|+||+|+++++ .+..+..+| ..+...|+++.||.|++.+.
T Consensus 81 l~pyIeRi~~Ge~~~vL~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~~~~~~~~~~~~--~~~~~~~~l~~Gk~l~~~~~ 158 (597)
T PLN02249 81 LKTEIQRISNGDRSPILSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMP--VMNLYVPGLDKGKGLYFLFV 158 (597)
T ss_pred hHHHHHHHHcCCCCceeCCCchhhhcccCCCCCCceeEEeccHHHHHHHHHHHHHHHH--HHhccCCccccCcEEEEEec
Confidence 99999999999887799999999999999999999999999999998 355566666 34444688889999999888
Q ss_pred ccccccCCCceeecccccccccccccCCCCCCCccccCchhhhccCChhhHHHHHHHhhhccccceeEEEeccHHHHHHH
Q 007558 158 KAETKTASGLLARPVLTSYYKSEQFKTRPYDPFNVYTSPDEAILCVDSFQSMYIQMLCGLIMREEVLRVGAVFASGLLRA 237 (598)
Q Consensus 158 ~~~~~t~~Gip~g~~s~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~ 237 (598)
..+..|.+|+|+|++++.++++..|+.++. ...|++|.+++.+.|..+++||||||||.+++++..|++.+|+.++.+
T Consensus 159 ~~~~~t~gG~p~~~~~~~~~~~~~f~~~~~--~~~~~~P~ev~~~~D~~~~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~ 236 (597)
T PLN02249 159 KSESKTSGGLPARPALTSYYKSDHFRTSDY--DNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRA 236 (597)
T ss_pred cccccCCCCCccCccccccccccccccccc--cccccCcHHhhcCCCHHHHHHHHHHHHHhhccccceEEEECcHHHHHH
Confidence 888999999999999998778777777654 668999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcccCCCCCCChhhhhhhhhcc-CCCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCchh
Q 007558 238 IRFLQLNWKQLADDISAGTLNPNVTDPSIRKCMENIL-KPNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAMA 316 (598)
Q Consensus 238 ~~~l~~~w~~l~~dI~~gt~~~~i~~~~~r~~l~~~l-~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~ 316 (598)
++.|+++|++||+||++|+++.+++++.+|..+..++ .|+|++|++|+++|.+.+|+|++++|||||++|+||++|+++
T Consensus 237 ~~~l~~~weel~~dI~~g~~~~~~~~~~~~~~v~~i~g~P~~~la~~i~~~~~~~~~~gii~~lWPnl~~i~~~~~G~~~ 316 (597)
T PLN02249 237 ISFLQNNWKELAQDISTGTLSSKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQENWEGIITKIWPNTKYLDVIVTGAMA 316 (597)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHhhcCCCCHHHHHHHHHHhccccccccHHHhCCCCCeEEEEecCChH
Confidence 9999999999999999999999999999999998888 599999999999998877999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCeeccccccccccccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCC
Q 007558 317 QYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVG 396 (598)
Q Consensus 317 ~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G 396 (598)
+|++.|++++|++++++.+|+||||+||+|+++.|+++..+|+|+++.+||||||.++.+. +....+.+|+++|||+|
T Consensus 317 ~Y~~~l~~~~g~~~~~~~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ffEFiP~~~~~~--~~~~~~~~v~l~eVe~G 394 (597)
T PLN02249 317 QYIPMLEYYSGGLPMASTIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGD--GALDETSLVELADVEVG 394 (597)
T ss_pred HHHHHHHHHcCCCccccccccccceEEEeecCCCCCCCCcceEecCCcEEEEeeecccCCc--ccCCCCcEecHHHcCCC
Confidence 9999999999999999999999999999999999998889999999999999999875321 00123459999999999
Q ss_pred CeEEEEEcccccccccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEe
Q 007558 397 KQYELVVTTYAGLNRYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSY 476 (598)
Q Consensus 397 ~~yelvvTt~~GL~RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~ 476 (598)
++|||||||++|||||++||+|+|+||++++|+|+|+||+++++|++|||++|++++.||.+|...+++.|+.|.||+++
T Consensus 395 ~~Y~lVvTT~~GLyRY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~a~~~~~~~~~~v~eft~~ 474 (597)
T PLN02249 395 KEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSY 474 (597)
T ss_pred CeEEEEEEcccceeEeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHHHHHHhhhcCceEEEeEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999887777789999999998
Q ss_pred ecCCCCCceEEEEEEEeecccCC-CCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEeCCChHHHHHHHHHhcC
Q 007558 477 ADTTTIPGHYVIFWELLVKDAAN-SPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRG 555 (598)
Q Consensus 477 ~d~~~~p~~Y~l~~E~e~~~~~~-~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtF~~~~~~~~~~G 555 (598)
++.++.|+||+||||++..++.. +.+.+.+.+||..+|++||.+|+++|..+|+|+||+|++|++|+|++|+++++++|
T Consensus 475 ~~~~~~p~Hyvl~wei~~~~~~~~~~~~~~~~~~~~~~e~~ln~~Y~~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~G 554 (597)
T PLN02249 475 AETKTIPGHYVIYWELLGRDQSNALPSDEVMAKCCLEMEESLNSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRG 554 (597)
T ss_pred cCCCCCCCceEEEEEEeccccccCCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCccCCeEEEEeCCchHHHHHHHHHhCC
Confidence 88877799999999994212111 24677899999999999999999999766699999999999999999999999999
Q ss_pred CCCCCCCCCcccCCHhHHHHHhccccceeccCCCCCCCCCCC
Q 007558 556 ASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPERR 597 (598)
Q Consensus 556 ~~~~Q~K~Pr~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 597 (598)
+++||||+|||+++++.+++|+++|+++|+|+++|.|+|+.+
T Consensus 555 ~~~gQ~K~Prl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 596 (597)
T PLN02249 555 SSINQYKVPRCVSLTPIMELLDSRVVSAHFSPSLPHWSPERR 596 (597)
T ss_pred CcCCCcCCceEeCCHHHHHHHHhhhheeeccccCCCCCCCCC
Confidence 999999999999999999999999999999999999999753
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=1.2e-111 Score=938.87 Aligned_cols=515 Identities=36% Similarity=0.657 Sum_probs=407.2
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHhcCCChhhHhcCCCCCCCHHH--HhhcCCCcccccchHHHHHHHcCCCcccccCC
Q 007558 22 ALRFIEEMTRNADPVQERVLAAILSRNGETEYLRRFNLDGATDRDT--FKSKVPVVTYEDLQPEIQRIANGDRSAILSSH 99 (598)
Q Consensus 22 ~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~ed--f~~~vPl~~Yed~~p~ier~~~Ge~~~ll~~~ 99 (598)
.+++|+++++|++++|+++|++||+.|++|+|||+|||++|+|+|| ||++|||++||||+|||+||++||. +|||++
T Consensus 2 ~l~~f~~~~~~~~~~Q~~~L~~iL~~n~~T~yGr~~gf~~i~s~ed~~Fr~~VPi~~Yed~~pyIeR~~~Ge~-~vL~~~ 80 (528)
T PF03321_consen 2 VLKRFEKATKNPEQVQEEVLREILRRNADTEYGRDHGFAGIRSVEDESFRKRVPITDYEDYRPYIERIAEGEE-NVLTPG 80 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHCTTSHHHHCTT--S----HHHHHHHHS--BEHHHHHHHHHHHHTT---CCTSSS
T ss_pred hHHHHHHHHhCHHHHHHHHHHHHHHhhccCHhHHhcCCCCCCCcchHHHHHhCCCccHHHHHHHHHHHhcCCC-CCCCCC
Confidence 4789999999999999999999999999999999999999999999 9999999999999999999999997 699999
Q ss_pred ccceeecccccCCCCcccccCChHHHHHHH--HHHHHHHHHHhhcCCCC-CCCceEEEEe--cccccccCCCceeecccc
Q 007558 100 PVSEFLTSSGTSAGERKLMPTIHEELDRRQ--LLFSLLMPVMNLYVPGL-DKGKGLYFLF--VKAETKTASGLLARPVLT 174 (598)
Q Consensus 100 pi~~f~~TSGTT~G~~K~IP~T~~~~~~~~--~~~~~~~~~~~~~~p~~-~~gk~l~~~~--~~~~~~t~~Gip~g~~s~ 174 (598)
|+.+|+.||||||+++|+||+|+++++.+. .+..+|...+.+++|.. ..||.+++.+ .+....|++|+|+|++|+
T Consensus 81 ~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~~p~~~~~gk~~~l~~~~~~~~~~t~~Gi~~g~~s~ 160 (528)
T PF03321_consen 81 PPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRNFPGLLFQGKSLYLSFSFAPPPLRTPGGIPIGSISG 160 (528)
T ss_dssp --SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHHSSS--TTSE--EEEE------EE-TTS-EEE-HHH
T ss_pred CCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhcCcccccCCcceEEEeecCCCcccCCCCeEEecccc
Confidence 999999999999544999999999998865 77788888888889987 5788555553 467788999999999999
Q ss_pred cccccccccCCCCCCCccccCchhhhccCChhhHHHHHHHhhhccccceeEEEeccHHHHHHHHHHHHHHHHHHHHHHHc
Q 007558 175 SYYKSEQFKTRPYDPFNVYTSPDEAILCVDSFQSMYIQMLCGLIMREEVLRVGAVFASGLLRAIRFLQLNWKQLADDISA 254 (598)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~ 254 (598)
..+++ .+......|++|.+++.+.|..+++||||||+|.+++||+.|+++|+++|+.++++|+++|+++|+||++
T Consensus 161 ~~~~~-----~~~~~~~~~~~P~~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~dI~~ 235 (528)
T PF03321_consen 161 IPYRM-----IPPWFRSWFTSPSEVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEELVEDIRD 235 (528)
T ss_dssp HHHT-------SCCHHG-BSS-HHHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhh-----ChHHHccCccCCHHHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHHhcC
Confidence 87662 1111124799999999999999999999999999899999999999999999999999999999999999
Q ss_pred ccCCCCCCChhhhhhhhhccCCCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCchhhhHHHHHhhcCCCCeecc
Q 007558 255 GTLNPNVTDPSIRKCMENILKPNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAMAQYIPTLDHYSGGLPLACT 334 (598)
Q Consensus 255 gt~~~~i~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~~y~~~l~~~~~g~~v~~~ 334 (598)
|+++ .+.|+|++|++|+++|.++ .|++++|||||++|.||.+|++.+|+++|++++|++++++.
T Consensus 236 G~~~--------------~~~p~p~rA~~L~~~~~~~--~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~ 299 (528)
T PF03321_consen 236 GTLS--------------LLRPNPERAAELRAEFEKG--RGIPKRLWPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSK 299 (528)
T ss_dssp TS----------------C-S--HHHHHHHHHHHCCS--TTHHHHHSTT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-
T ss_pred Cccc--------------cCCCCHHHHHHHHHhhccc--CCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCCCceeec
Confidence 9988 3678999999999999985 78999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEccccccccccc
Q 007558 335 MYASSECFFGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTTYAGLNRYRV 414 (598)
Q Consensus 335 ~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt~~GL~RYr~ 414 (598)
+|+||||+||+|+++ +..+|.|+|+.+||||||+++.+.+ ....++++.++|||+|++|||||||.+||||||+
T Consensus 300 ~y~ASEg~i~i~~~~----~~~~~~l~~~~~ffEFip~~~~~~~--~~~~~~~l~~~ele~G~~YelviTt~~GLyRY~i 373 (528)
T PF03321_consen 300 GYGASEGFIGIPLDP----EDPGYVLAPDSGFFEFIPVDEDEQN--PSEQPKTLLLHELEVGEEYELVITTNSGLYRYRI 373 (528)
T ss_dssp EEEETTEEEEEES-C----CC--EEE-TTSSEEEEEE-STT---------SSSEEGGG--TT-EEEEEEESTTS-SSEEE
T ss_pred cccccceEEEEecCC----CCCceEeecCCeEEEEEeccCCccc--ccCCCceecHHHhcCCCeEEEEEecccceeeeec
Confidence 999999999999873 3568999999999999999865310 0134569999999999999999999999999999
Q ss_pred CCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEeec-CCCCCceEEEEEEEe
Q 007558 415 GDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYAD-TTTIPGHYVIFWELL 493 (598)
Q Consensus 415 GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d-~~~~p~~Y~l~~E~e 493 (598)
||||+|+||++++|+|+|+||.++++|++|||++|.+|++||.+++. ++|+.+.+|++.++ .++.||||++|||++
T Consensus 374 GDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~---~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~ 450 (528)
T PF03321_consen 374 GDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQ---ETGLELRDFTVAPDPSSGNPPHYVLFWELE 450 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHH---CTT-EEEEEEEEEE--SSSSBEEEEEEEEC
T ss_pred CCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHH---hcCCceeeEEEEeecccCCCCceEEEEEeC
Confidence 99999999999999999999999999999999999999999999863 68999999999998 678999999999997
Q ss_pred ecccCCCCChHHHHHHHHHHHHHh---ChhhHhccccCCccCCeEEEEeCCChHHHHHHHHHhc-CCCCCCCCCCcccCC
Q 007558 494 VKDAANSPSDEVLNQCCLVVEESL---NSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISR-GASINQYKAPRCVSF 569 (598)
Q Consensus 494 ~~~~~~~~~~~~l~~~~~~ld~~L---n~~Y~~~R~~~g~l~p~~v~~v~~gtF~~~~~~~~~~-G~~~~Q~K~Pr~~~~ 569 (598)
. . ++.++.|++.||++| |++|+.+|..+|+|+||+|++|++|+|++|+++++++ |++.+|||+|||+++
T Consensus 451 ~-----~--~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~~g~f~~~~~~~~~~~G~~~~Q~K~pr~~~~ 523 (528)
T PF03321_consen 451 G-----E--PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVRPGTFDALMERAVARLGGSAGQYKVPRLIRD 523 (528)
T ss_dssp S--------HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-TTHHHHHHHHHHCT-T--SSS----SS--T
T ss_pred C-----C--chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeCcchHHHHHHHHhhcCCCCccceeCccccCc
Confidence 3 1 457889999999999 9999999944389999999999999999999999999 999999999999999
Q ss_pred HhHHH
Q 007558 570 TPILE 574 (598)
Q Consensus 570 ~~~~~ 574 (598)
+++.+
T Consensus 524 ~~~~~ 528 (528)
T PF03321_consen 524 REFVE 528 (528)
T ss_dssp CHHHH
T ss_pred cccCC
Confidence 98843
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.97 E-value=1.7e-30 Score=276.26 Aligned_cols=396 Identities=19% Similarity=0.236 Sum_probs=261.1
Q ss_pred HHHHHh-hCHHHHHHHHHHHHHHh-cCCChhhHhc----CC--CCCCCHHHHhhcCCCcccccchHHHH-HHHcCCCccc
Q 007558 25 FIEEMT-RNADPVQERVLAAILSR-NGETEYLRRF----NL--DGATDRDTFKSKVPVVTYEDLQPEIQ-RIANGDRSAI 95 (598)
Q Consensus 25 ~~e~~~-~~~~~~Q~~~L~~iL~~-~~~T~ygr~~----gf--~~i~s~edf~~~vPl~~Yed~~p~ie-r~~~Ge~~~l 95 (598)
+.+.+. +.+++.|++.|+.+++. .+|++|||+| |+ ++|++.+|+. ++|+++++++|.... ++.+.
T Consensus 14 ~~e~~~r~eL~~lq~~rl~~~~k~~yeNsPfYr~~f~~~~v~p~~i~~l~Dl~-klP~t~K~~lre~ypf~~~~~----- 87 (438)
T COG1541 14 EIETLSRKELEKLQEKRLKSTVKYVYENSPFYRKKFKEAGVDPDDIKTLEDLA-KLPFTTKDDLRENYPFGDFAV----- 87 (438)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCChHHhhCHHHHH-hCCCCcHHHHHHhCCcccccc-----
Confidence 456666 77999999999999997 5999999986 44 4799999995 899999999998876 44333
Q ss_pred ccCCccceeecccccCCCCcccccCChHHHHHHH--HHHHHHHHHHhhcCCCCCCCceEEEEecccccccCCC--ceeec
Q 007558 96 LSSHPVSEFLTSSGTSAGERKLMPTIHEELDRRQ--LLFSLLMPVMNLYVPGLDKGKGLYFLFVKAETKTASG--LLARP 171 (598)
Q Consensus 96 l~~~pi~~f~~TSGTT~G~~K~IP~T~~~~~~~~--~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~G--ip~g~ 171 (598)
+.+.+.+++.||||| |+|+.+|+|..++.... .++.++. .+...|..+...++ .+...+| ...|+
T Consensus 88 -~~~~i~~ihaSSGTT-GkPt~~~~t~~D~~~wa~~~aR~~~~-------~g~~~gd~v~~~~~--yGl~tgg~~~~~ga 156 (438)
T COG1541 88 -PKEEIVRIHASSGTT-GKPTVFGYTAKDIERWAELLARSLYS-------AGVRKGDKVQNAYG--YGLFTGGLGLHYGA 156 (438)
T ss_pred -cccceEEEEccCCCC-CCceeeecCHHHHHHHHHHHHHHHHH-------ccCCCCCEEEEEee--eccccCCchhHHHH
Confidence 235576799999999 89999999999875432 1222221 23344543333322 1111122 11111
Q ss_pred ccccccccccccCCCCCCCccccCchhhhccCChhhHHHHHHHhhhccccceeEEEeccHHHHHHHHHHHHHHHHHHHHH
Q 007558 172 VLTSYYKSEQFKTRPYDPFNVYTSPDEAILCVDSFQSMYIQMLCGLIMREEVLRVGAVFASGLLRAIRFLQLNWKQLADD 251 (598)
Q Consensus 172 ~s~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~d 251 (598)
-.+++ .++..++...-.-+ +++.|
T Consensus 157 -----------------------------------------~rig~-------~vip~~~g~~~~~~--------~l~~d 180 (438)
T COG1541 157 -----------------------------------------ERIGA-------TVIPISGGNTERQL--------ELMKD 180 (438)
T ss_pred -----------------------------------------HhhCE-------EEEccCCccHHHHH--------HHHHh
Confidence 00111 11111211111111 12222
Q ss_pred HHcccCCCCCCChhhhhhhhhccCCCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCc---hhhhHHHHHhhcCC
Q 007558 252 ISAGTLNPNVTDPSIRKCMENILKPNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGA---MAQYIPTLDHYSGG 328 (598)
Q Consensus 252 I~~gt~~~~i~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~---~~~y~~~l~~~~~g 328 (598)
.. ++. +..+|+.+..|++...+.|. .+.++ + |+.++.|+ ..+.++.+++.| |
T Consensus 181 f~-------~tv----------I~~tps~~l~lae~~~~~G~--~~~~~--~---lk~~i~gaE~~see~R~~ie~~~-g 235 (438)
T COG1541 181 FK-------PTV----------IAATPSYLLYLAEEAEEEGI--DPDKL--S---LKKGIFGAEPWSEEMRKVIENRF-G 235 (438)
T ss_pred cC-------CcE----------EEEChHHHHHHHHHHHHcCC--Chhhc--c---eeEEEEecccCCHHHHHHHHHHh-C
Confidence 22 222 33489999999888887631 34444 4 66777776 478899999999 9
Q ss_pred CCeeccccccccccc-cccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEccc-
Q 007558 329 LPLACTMYASSECFF-GLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTTY- 406 (598)
Q Consensus 329 ~~v~~~~ygaSEg~~-~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt~- 406 (598)
++++ +.||+||++. |. .+|... .++|++.+.-++|.+++++.+ .|.+|+.||||+||+
T Consensus 236 ~~~~-diYGltE~~g~g~---~eC~~~-~glhi~eD~~~~Ei~dP~t~e---------------~l~dge~GelV~T~L~ 295 (438)
T COG1541 236 CKAF-DIYGLTEGFGPGA---GECTER-NGLHIWEDHFIFEIVDPETGE---------------QLPDGERGELVITTLT 295 (438)
T ss_pred Ccee-eccccccccCCcc---cccccc-cCCCcchhhceeeeecCCcCc---------------cCCCCCeeEEEEEecc
Confidence 9998 9999999843 42 466654 489999888899999987642 456899999999987
Q ss_pred ---ccccccccCCEEEEeeeeCC----CCeE-EEEeecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEeec
Q 007558 407 ---AGLNRYRVGDILLVTGYYNS----APQF-RFVKRKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYAD 478 (598)
Q Consensus 407 ---~GL~RYr~GDvV~v~gf~~~----~P~i-~f~gR~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d 478 (598)
..|+||||||++.+...... .++| ++.||.+||+.+.|.++.+.+|+.+|.+... +.. +|.+...
T Consensus 296 ~~~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~------~~~-~yqi~~~ 368 (438)
T COG1541 296 KEGMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPE------VTP-HYQIILT 368 (438)
T ss_pred ccCcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccC------CCc-eEEEEEe
Confidence 45999999999999973322 2344 8999999999999999999999999987532 111 8887765
Q ss_pred CCCCCceEEEEEEEeecccCCCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEeCCChHHHHHHHHHhcCCCC
Q 007558 479 TTTIPGHYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASI 558 (598)
Q Consensus 479 ~~~~p~~Y~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtF~~~~~~~~~~G~~~ 558 (598)
..+.-..-++-+|++.. + .......+++..+...+ ... --..++|.+|.+|+.++. .|
T Consensus 369 ~~~~~d~L~V~vE~~~~-~---~~~~~~~~~~~~l~~~~-------~~~--~~~~~~v~~v~~g~l~r~------~~--- 426 (438)
T COG1541 369 RNGGLDELTVRVELENE-A---EELEDERRLAKKLIKNI-------KSE--LGVRVEVELVEPGELPRT------EG--- 426 (438)
T ss_pred cCCCCceEEEEEEecCc-c---cchHHHHHHHHHHHHHH-------Hhh--cCCceEEEEEeccceecc------cC---
Confidence 43333455666777521 1 11122222333444333 212 257789999999998863 23
Q ss_pred CCCCCCcccCCH
Q 007558 559 NQYKAPRCVSFT 570 (598)
Q Consensus 559 ~Q~K~Pr~~~~~ 570 (598)
|.+|++..+
T Consensus 427 ---K~krvvd~r 435 (438)
T COG1541 427 ---KAKRVVDKR 435 (438)
T ss_pred ---ceeEEEEec
Confidence 788887544
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.95 E-value=2.9e-27 Score=259.45 Aligned_cols=394 Identities=12% Similarity=0.109 Sum_probs=227.0
Q ss_pred HHHh-hCHHHHHHHHHHHHHHhc-CCChhhHhc----CCC--CCCCHHHHhhcCCCcccccchHHHHHHHcCCCcccc--
Q 007558 27 EEMT-RNADPVQERVLAAILSRN-GETEYLRRF----NLD--GATDRDTFKSKVPVVTYEDLQPEIQRIANGDRSAIL-- 96 (598)
Q Consensus 27 e~~~-~~~~~~Q~~~L~~iL~~~-~~T~ygr~~----gf~--~i~s~edf~~~vPl~~Yed~~p~ier~~~Ge~~~ll-- 96 (598)
|.+. .+.++.|.+.|+++|++. ++++|||++ |++ +|++++||+ ++|+++++|++...... .+.=.++
T Consensus 7 e~~~~~~l~~~q~~rl~~~l~~a~~~spfYr~~~~~~g~~p~~i~sl~dl~-~lP~~~k~~lr~~~p~~--~~~~~~~~~ 83 (445)
T TIGR03335 7 ETMERGELDALVEERIRYTVHYAAEHSPFYKKWFQENNISPSDIKSHEDLL-ELPVISGEVIRKNQPPV--TDDFMFKSA 83 (445)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCCcc--ccccccccC
Confidence 4444 568899999999999975 899999974 664 799999996 79999999998764100 0000011
Q ss_pred cCCccceeecccccCCCCcccccCChHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEecccccccCCCceeecccccc
Q 007558 97 SSHPVSEFLTSSGTSAGERKLMPTIHEELDRRQLLFSLLMPVMNLYVPGLDKGKGLYFLFVKAETKTASGLLARPVLTSY 176 (598)
Q Consensus 97 ~~~pi~~f~~TSGTT~G~~K~IP~T~~~~~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~ 176 (598)
+.+.+.++..||||| |+||.+++|...+......... .+. ..++..|..+...++ . |.-.|..
T Consensus 84 ~~~~i~~i~~TSGTT-G~Pk~v~~T~~dl~~~~~~~~r--~~~---~~G~~~gD~vl~~~~--~-----~~~~g~~---- 146 (445)
T TIGR03335 84 DWKDIYTIHETSGTS-GTPKSFFLTWDDWKRYAEKYAR--SFV---SQGFTAGDRMVICAS--Y-----GMNVGAN---- 146 (445)
T ss_pred CHHHeEEEEeCCCCC-CCcceeeecHHHHHHHHHHHHH--HHH---HcCCCCCCeEEEEec--C-----CcchhHH----
Confidence 334566788899999 8999999999876543211110 000 112333433322210 0 0000000
Q ss_pred cccccccCCCCCCCccccCchhhhccCChhhHHHHHHHhhhccccceeEEEeccHHHHHHHHHHHHHHHHHHHHHHHccc
Q 007558 177 YKSEQFKTRPYDPFNVYTSPDEAILCVDSFQSMYIQMLCGLIMREEVLRVGAVFASGLLRAIRFLQLNWKQLADDISAGT 256 (598)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~gt 256 (598)
...+..+.++. ..+.... .. .+-+++++..
T Consensus 147 ------------------------------~~~~~~~~~Ga------~vi~~~~---~~--------~~~~~i~~~~--- 176 (445)
T TIGR03335 147 ------------------------------TMTLAAREVGM------SIIPEGK---CT--------FPIRIIESYR--- 176 (445)
T ss_pred ------------------------------HHHHHHHHcCC------EEEcCCc---hh--------HHHHHHHHhC---
Confidence 00000011110 1111000 00 0111222221
Q ss_pred CCCCCCChhhhhhhhhccCCCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeec
Q 007558 257 LNPNVTDPSIRKCMENILKPNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLAC 333 (598)
Q Consensus 257 ~~~~i~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~ 333 (598)
++ .+.+.|..+..|.+.+.+.+ +-.. .++ ++.+++||. ...+..+++.| |++++
T Consensus 177 ----~t----------~l~~~ps~ll~La~~~~~~g---~~~~-~~~---lr~ii~gGE~l~~~~r~~ie~~~-g~~v~- 233 (445)
T TIGR03335 177 ----PT----------GIVASVFKLLRLARRMKAEG---IDPA-ESS---IRRLVVGGESFADESRNYVEELW-GCEVY- 233 (445)
T ss_pred ----CC----------EEEECHHHHHHHHHHHHHcC---CCcc-cCc---ceEEEEcCCCCCHHHHHHHHHHh-CCcEE-
Confidence 11 12235666666655554432 2111 235 677777762 45677888888 79999
Q ss_pred cccccccccccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEccc-------
Q 007558 334 TMYASSECFFGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTTY------- 406 (598)
Q Consensus 334 ~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt~------- 406 (598)
+.||+||+.++ ..|.. ..++|+..+..++|++++++. + .|++|+.||||+|++
T Consensus 234 ~~YG~TE~~~~----~~c~~-~~g~h~~~d~~~vEIvDp~~~----------~-----~vp~Ge~GELvvT~L~~~~~r~ 293 (445)
T TIGR03335 234 NTYGSTEGTMC----GECQA-VAGLHVPEDLVHLDVYDPRHQ----------R-----FLPDGECGRIVLTTLLKPGERC 293 (445)
T ss_pred ecCChhhhhhe----EEecC-CCCccccCCceEEEEEcCCCC----------C-----CCcCCCceEEEEEecCCCCccC
Confidence 89999997433 24432 357888878889999986543 1 246799999999987
Q ss_pred -ccccccccCCEEEEe-eee----CCCCeEEEEeecCceecccccccCHHHHHHHHHHHH--HHhhhcCCeEEeEEEeec
Q 007558 407 -AGLNRYRVGDILLVT-GYY----NSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNAS--LLLKEFNASVIEYTSYAD 478 (598)
Q Consensus 407 -~GL~RYr~GDvV~v~-gf~----~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a~--~~l~~~g~~l~~f~~~~d 478 (598)
..|+||||||++++. .-. ...|+|..+||.+||+.+.|.++++.+|+++|.+.. ..+ ++ +|.+..+
T Consensus 294 ~~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~--~~----~~~~~~~ 367 (445)
T TIGR03335 294 GSLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSL--TG----EYEAFLY 367 (445)
T ss_pred CceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCC--Cc----cEEEEEe
Confidence 349999999999973 222 123577778999999999999999999999997731 111 12 6776654
Q ss_pred CCC-CCceEEEEEEEeecccCCCCChHHHHHHHHHHHHHhChhhHhcccc--CCccCCeEEEEeCCChHHH
Q 007558 479 TTT-IPGHYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVA--DNSIGPLEIRVVKNGTFEE 546 (598)
Q Consensus 479 ~~~-~p~~Y~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~--~g~l~p~~v~~v~~gtF~~ 546 (598)
... ....-.|.+|.. + + .....+.+.+.+.+++...++..+.. .+ .-.++|.+|++|++++
T Consensus 368 ~~~~~~~~~~v~~e~~--~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 431 (445)
T TIGR03335 368 GEEEGEITLRVSLECE--D---K-DNCSIHDIQENFTGTFLKYKPELIGSYDEG-IFQILVNFTGPGELEL 431 (445)
T ss_pred cCCCCCceEEEEEEec--C---c-ccchHHHHHHHHHHHHhhhhhhhhhhhhcc-eEEEEEEEeCCCCccc
Confidence 321 111233334442 1 1 11123344445555421222221101 11 2346899999999975
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.93 E-value=4.4e-24 Score=232.39 Aligned_cols=386 Identities=16% Similarity=0.147 Sum_probs=223.4
Q ss_pred hCHHHHHHHHHHHHHHhc-CCChhhHhc----CCC--CCCCHHHHhhcCCCcccccchHHHHHHHcCCCcccc--cCCcc
Q 007558 31 RNADPVQERVLAAILSRN-GETEYLRRF----NLD--GATDRDTFKSKVPVVTYEDLQPEIQRIANGDRSAIL--SSHPV 101 (598)
Q Consensus 31 ~~~~~~Q~~~L~~iL~~~-~~T~ygr~~----gf~--~i~s~edf~~~vPl~~Yed~~p~ier~~~Ge~~~ll--~~~pi 101 (598)
++.++.|.+.|+++|+.+ ++++|||++ |++ +|++++||+ ++|++++++++..... .++ ..+.+
T Consensus 6 ~~l~~~q~~~l~~~~~~a~~~~pfYr~~~~~~~i~~~~i~~~~dl~-~lP~~~K~~l~~~~~~-------~~~~~~~~~~ 77 (422)
T TIGR02155 6 DELRALQTQRLKWTVKHAYENVPHYRKAFDAAGVHPDDLQSLSDLA-KFPFTQKHDLRDNYPF-------GLFAVPREQV 77 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCcHHHHhhcCCC-------cccCCChHHc
Confidence 567899999999999985 899999974 553 789999996 7999999999865421 122 22345
Q ss_pred ceeecccccCCCCcccccCChHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEecccccccCCCceeeccccccccccc
Q 007558 102 SEFLTSSGTSAGERKLMPTIHEELDRRQLLFSLLMPVMNLYVPGLDKGKGLYFLFVKAETKTASGLLARPVLTSYYKSEQ 181 (598)
Q Consensus 102 ~~f~~TSGTT~G~~K~IP~T~~~~~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~~~~~~ 181 (598)
.++..||||| |+||.+++|+..+.....+... ... +-++..|..++..++ .....+|..
T Consensus 78 ~~~~~TSGTT-G~Pk~v~~t~~~~~~~~~~~~~---~~~--~~g~~~~d~~~~~~~--~~~~~~~~~------------- 136 (422)
T TIGR02155 78 VRIHASSGTT-GKPTVVGYTQNDIDTWSSVVAR---SIR--AAGGRPGDLIHNAYG--YGLFTGGLG------------- 136 (422)
T ss_pred EEEEECCCCC-CCCeEeccCHHHHHHHHHHHHH---HHH--HcCCCCCcEEEEccC--ccccchhHH-------------
Confidence 5677899999 8999999999876432221110 000 112223322221100 000000000
Q ss_pred ccCCCCCCCccccCchhhhccCChhhHHHHHHHhhhccccceeEEEeccHHHHHHHHHHHHHHHHHHHHHHHcccCCCCC
Q 007558 182 FKTRPYDPFNVYTSPDEAILCVDSFQSMYIQMLCGLIMREEVLRVGAVFASGLLRAIRFLQLNWKQLADDISAGTLNPNV 261 (598)
Q Consensus 182 ~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~gt~~~~i 261 (598)
..|..+.++.. +-.+....+ +.+++.|++. ++
T Consensus 137 --------------------------~~~~~~~~g~~----~~~~~~~~~--------------~~~~~~i~~~----~~ 168 (422)
T TIGR02155 137 --------------------------AHYGAEKLGCT----VVPISGGQT--------------EKQVQLIQDF----KP 168 (422)
T ss_pred --------------------------HHHHHHHcCcE----EEecCCCCH--------------HHHHHHHHHH----CC
Confidence 00011111100 000001111 1222333332 12
Q ss_pred CChhhhhhhhhccCCCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeecccccc
Q 007558 262 TDPSIRKCMENILKPNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYAS 338 (598)
Q Consensus 262 ~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~yga 338 (598)
+. +...|..+..|.+...+.+. .+.. +. ++.+++||. ...++.+++.| |++++ +.||+
T Consensus 169 t~----------l~~~Ps~l~~L~~~~~~~~~--~~~~--~~---lr~i~~~ge~l~~~~~~~i~~~~-g~~v~-~~YG~ 229 (422)
T TIGR02155 169 DI----------IMVTPSYMLNLLEELKRMGI--DPAQ--TS---LQVGIFGAEPWTNAMRKEIEARL-GMKAT-DIYGL 229 (422)
T ss_pred CE----------EEEcHHHHHHHHHHHHHcCC--Cccc--Cc---eEEEEEeCCcCCHHHHHHHHHHh-CCceE-ecccc
Confidence 21 33477777776655443321 1111 23 667666652 46678888889 79998 89999
Q ss_pred cccc-ccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEcccc----cccccc
Q 007558 339 SECF-FGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTTYA----GLNRYR 413 (598)
Q Consensus 339 SEg~-~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt~~----GL~RYr 413 (598)
||+. .++. ..|.....++|+..+..+.|.+++++.. +|.+|+.||||+|+.. .+.||+
T Consensus 230 tE~~~~~~~--~~~~~~~~g~~~~~~~~~~eivd~~~g~---------------~v~~Ge~Gelvvt~~~~~~~p~~ry~ 292 (422)
T TIGR02155 230 SEVIGPGVA--MECVETQDGLHIWEDHFYPEIIDPHTGE---------------VLPDGEEGELVFTTLTKEALPVIRYR 292 (422)
T ss_pred hhhcCCcee--ecccccCCCceEecCeeEEEEECCCCCC---------------CCCCCCeeEEEEecCCccccceeeEE
Confidence 9962 2221 2342223567777666788988754321 3467999999999752 267999
Q ss_pred cCCEEEEeeee-CCCCe-EEEEeecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEeecCCCCCceEEEEEE
Q 007558 414 VGDILLVTGYY-NSAPQ-FRFVKRKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYADTTTIPGHYVIFWE 491 (598)
Q Consensus 414 ~GDvV~v~gf~-~~~P~-i~f~gR~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~E 491 (598)
|||+++++.-. ...|+ +.|+||.+|++++.|++|++.+|+.+|.+.. ++. ..|.+..+..+.+-..++++|
T Consensus 293 TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~------~v~-~~~q~~~~~~~~~~~~~~~v~ 365 (422)
T TIGR02155 293 TRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMD------ELS-PHYQLELTRNGHMDELTLKVE 365 (422)
T ss_pred cCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCc------CcC-CCEEEEEEcCCCccEEEEEEE
Confidence 99999987410 12233 4899999999999999999999999997632 221 145554443222235666777
Q ss_pred EeecccCCCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEeCCChHHH
Q 007558 492 LLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEE 546 (598)
Q Consensus 492 ~e~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtF~~ 546 (598)
+.. +.......+..+.+++.|.+.+ |... -..++|.++.+|++.+
T Consensus 366 ~~~-~~~~~~~~~~~~~~~~~i~~~~-------~~~~--~~~~~v~~~~~~~lp~ 410 (422)
T TIGR02155 366 LKP-ESYTLRLHEQASLLAGEIQHTI-------KQEV--GVSMDVHLVEPGSLPR 410 (422)
T ss_pred Eec-CcccccchHHHHHHHHHHHHHH-------Hhcc--CcEEEEEEECCCCccC
Confidence 642 1100011223333445565555 4332 2236799999999864
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.87 E-value=2.1e-20 Score=202.95 Aligned_cols=315 Identities=16% Similarity=0.258 Sum_probs=199.0
Q ss_pred hCHHHHHHHHHHHHHHhc-CCChhhHhcCCCCCCCHHHHhhcCCCcccccchHHHHHHHc-CC-Cccc----cc------
Q 007558 31 RNADPVQERVLAAILSRN-GETEYLRRFNLDGATDRDTFKSKVPVVTYEDLQPEIQRIAN-GD-RSAI----LS------ 97 (598)
Q Consensus 31 ~~~~~~Q~~~L~~iL~~~-~~T~ygr~~gf~~i~s~edf~~~vPl~~Yed~~p~ier~~~-Ge-~~~l----l~------ 97 (598)
+..++.|++.|+++|+.. ++++|||++. ++ +++ ++|++++++++...+++.. |= .+.+ +.
T Consensus 22 ~~l~~~Q~~rL~~ll~~a~~~sPfYr~~~--~~----~l~-~lPvl~K~~~~~~fd~~~t~~l~~~~~~~~a~~~e~~r~ 94 (430)
T TIGR02304 22 EALENWQAKQLEKFLQFVLSHSPWFQRYH--TI----PFN-QWPMMDKALMMEHFDELNTAGLKKDEALDCAMRSEKTRD 94 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhhcc--CC----CHH-HCCCcCHHHHHHHHHHhhccCCChhhhhHHhhhhhhhcc
Confidence 468899999999999985 9999999973 33 574 7999999999999999873 21 1111 00
Q ss_pred ----CCccceeecccccCCCCcccccCChHHHHHHHHHHHHHHHHHhhcCC-CCCCC-ceEEEEecccccccCCCceeec
Q 007558 98 ----SHPVSEFLTSSGTSAGERKLMPTIHEELDRRQLLFSLLMPVMNLYVP-GLDKG-KGLYFLFVKAETKTASGLLARP 171 (598)
Q Consensus 98 ----~~pi~~f~~TSGTT~G~~K~IP~T~~~~~~~~~~~~~~~~~~~~~~p-~~~~g-k~l~~~~~~~~~~t~~Gip~g~ 171 (598)
.+.+ ....||||| |+|-.+.++++..... + +..+.+..| ++..| +..++..+...
T Consensus 95 f~~~~~~~-~v~~TSGSS-G~p~~f~~~~~~~~~~-~-----a~~~~~~~~~g~~~g~r~a~~~~~~~~----------- 155 (430)
T TIGR02304 95 FKPCVGNI-SVGLSSGTS-GRRGLFVVSPEEQQMW-A-----GGILAKVLPDGLFAKHRIAFFLRADNN----------- 155 (430)
T ss_pred cccccCcE-EEEECCCCC-CCceEEEECHHHHHHH-H-----HHHHhhhCccccccCCcEEEEEccChh-----------
Confidence 1233 567899999 8999999999865321 1 111222333 44444 44444211110
Q ss_pred ccccccccccccCCCCCCCccccCchhhhccCChhhHHHHHHHhhhccccceeEEEeccHHHH-HHHHHHHHHHHHHHHH
Q 007558 172 VLTSYYKSEQFKTRPYDPFNVYTSPDEAILCVDSFQSMYIQMLCGLIMREEVLRVGAVFASGL-LRAIRFLQLNWKQLAD 250 (598)
Q Consensus 172 ~s~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~l-l~~~~~l~~~w~~l~~ 250 (598)
.+. .+.++ .+ +..+++. +.+++.++
T Consensus 156 ----ly~--~~~~~-----------------------------------------------~~~~~~~~l~-~~~~~~l~ 181 (430)
T TIGR02304 156 ----LYQ--SVNNR-----------------------------------------------WISLDFFDLL-APFQAHIK 181 (430)
T ss_pred ----HHH--HHHhc-----------------------------------------------cceeeecCCC-cCHHHHHH
Confidence 000 00000 00 0112222 44556666
Q ss_pred HHHcccCCCCCCChhhhhhhhhccCCCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCc---hhhhHHHHHhhcC
Q 007558 251 DISAGTLNPNVTDPSIRKCMENILKPNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGA---MAQYIPTLDHYSG 327 (598)
Q Consensus 251 dI~~gt~~~~i~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~---~~~y~~~l~~~~~ 327 (598)
.|.+- +|.+ |.+.|+.+.+|.+...+++ . ++ . ++.++++| ....++.|++.|
T Consensus 182 ~L~~~-----------~P~~---L~g~pS~l~~LA~~~~~~~---l--~~--~---~k~ii~~~E~l~~~~r~~Ie~~f- 236 (430)
T TIGR02304 182 RLNQR-----------KPSI---IVAPPSVLRALALEVMEGE---L--TI--K---PKKVISVAEVLEPQDRELIRNVF- 236 (430)
T ss_pred HHHHh-----------CCCE---EEEcHHHHHHHHHHHHhcC---C--CC--C---ceEEEEccCCCCHHHHHHHHHHh-
Confidence 66654 2222 5568998999888776642 2 23 2 34455454 245678899999
Q ss_pred CCCeeccccccccccccccCCCCCCCCCCceeeecCCeEEE--eecCCCCCCCCCCCCCCccccccccCCCCeEEEEEcc
Q 007558 328 GLPLACTMYASSECFFGLNMKPMCKPSEVSYTIMPNMGYFE--FLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTT 405 (598)
Q Consensus 328 g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffE--Fip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt 405 (598)
|++|+ +.||+|||+++ .+|. +.+||+..+..|+| +++++ | .++.|||+
T Consensus 237 g~~V~-~~YG~tEg~la----~eC~--~g~lHl~ed~~~vE~~ivD~~----------------------~-~~~~ViT~ 286 (430)
T TIGR02304 237 KNTVH-QIYQATEGFLA----STCR--CGTLHLNEDLVHIEKQYLDEH----------------------K-RFVPIITD 286 (430)
T ss_pred CCCee-EccCCchhheE----EecC--CCCEEEccccEEEEeeEECCC----------------------C-ceEEEEec
Confidence 89999 89999998766 4664 34699999999999 45422 1 23459998
Q ss_pred c----ccccccccCCEEEEeeeeC----CCCeE-EEEeecCceecc---ccccc--CHHHHHHHHHHHHHHhhhcCCeEE
Q 007558 406 Y----AGLNRYRVGDILLVTGYYN----SAPQF-RFVKRKNVLLSI---DSDKT--DEAELQKGIDNASLLLKEFNASVI 471 (598)
Q Consensus 406 ~----~GL~RYr~GDvV~v~gf~~----~~P~i-~f~gR~~~~l~~---~GEki--~e~~v~~av~~a~~~l~~~g~~l~ 471 (598)
+ ..|+||+|||++++.+-.- ..|+| ++.||.+|++.+ .|..+ ++..+..++.... . .+.
T Consensus 287 L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~-----~--~i~ 359 (430)
T TIGR02304 287 FTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTL-----P--LIV 359 (430)
T ss_pred CCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcC-----C--CCc
Confidence 7 4599999999998865321 22467 599999999864 56555 8888888765432 1 245
Q ss_pred eEEEeecCCCCCceEEEEE
Q 007558 472 EYTSYADTTTIPGHYVIFW 490 (598)
Q Consensus 472 ~f~~~~d~~~~p~~Y~l~~ 490 (598)
+|.+... .+.+.+|.+
T Consensus 360 ~yQi~Q~---~~~~l~v~~ 375 (430)
T TIGR02304 360 EYRVLQT---GSAQLELIA 375 (430)
T ss_pred eEEEEEc---cCCeEEEEE
Confidence 8887654 355665544
No 9
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.61 E-value=1.5e-15 Score=156.99 Aligned_cols=135 Identities=21% Similarity=0.311 Sum_probs=101.2
Q ss_pred CCceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 303 NTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 303 ~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
.|+.++.+-.||+ ....+++...+ ||.+. ..+|+.||.+.+. ..+++.+. +..+++ -|....+
T Consensus 303 ~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQ-QVFGMAEGLvnyT--RLDDp~E~---i~~TQG----rPlsP~D--- 368 (542)
T COG1021 303 DLSSLRLLQVGGARLSATLARRVPAVL-GCQLQ-QVFGMAEGLVNYT--RLDDPPEI---IIHTQG----RPLSPDD--- 368 (542)
T ss_pred CchheeEEeecCcccCHHHHhhchhhh-CchHH-HHhhhhhhhhccc--ccCCchHh---eeecCC----CcCCCcc---
Confidence 4555777777885 45678888888 89999 9999999988764 22222111 122223 1333221
Q ss_pred CCCCCCcccc--ccccCCCCeEEEEEc---ccccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCcee
Q 007558 380 SPESPPRLVD--LAHVQVGKQYELVVT---TYAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLL 440 (598)
Q Consensus 380 ~~~~~~~~v~--~~eve~G~~yelvvT---t~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l 440 (598)
+.++++ ..+|.+||+|+|..- |+.|||| ||+||+|+.+ ....|.+.||.||.|
T Consensus 369 ----EvrvvD~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~----~dGyl~V~GR~KDQI 440 (542)
T COG1021 369 ----EVRVVDADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRD----PDGYLVVEGRVKDQI 440 (542)
T ss_pred ----eeEEecCCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEec----CCceEEEEeeehhhh
Confidence 224554 367899999999984 8899999 9999999999 488999999999999
Q ss_pred cccccccCHHHHHHHHHHH
Q 007558 441 SIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 441 ~~~GEki~e~~v~~av~~a 459 (598)
|++||||-.+|||+.+..-
T Consensus 441 NRgGEKIAAeEvEn~LL~H 459 (542)
T COG1021 441 NRGGEKIAAEEVENLLLRH 459 (542)
T ss_pred ccccchhhHHHHHHHHhhC
Confidence 9999999999999998763
No 10
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.46 E-value=5.2e-11 Score=136.56 Aligned_cols=229 Identities=16% Similarity=0.149 Sum_probs=126.7
Q ss_pred eEEEEeCch---hhhHHHHHhhcCC--CCeeccccccccccccccC-CC---CCCCCCCceeeecCCeEEEeecCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGG--LPLACTMYASSECFFGLNM-KP---MCKPSEVSYTIMPNMGYFEFLPHDPNSP 377 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g--~~v~~~~ygaSEg~~~i~~-~~---~~~~~~~~~~l~~~~~ffEFip~~~~~~ 377 (598)
|+.+++||. ......+++.+++ ++++ +.||+||+...+.. .+ .+.+...+. ..++ .-++.++.+.
T Consensus 369 lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~vG~-p~~g-~~~~i~d~~g--- 442 (637)
T PRK00174 369 LRLLGSVGEPINPEAWEWYYKVVGGERCPIV-DTWWQTETGGIMITPLPGATPLKPGSATR-PLPG-IQPAVVDEEG--- 442 (637)
T ss_pred eeEEEEeCCCCCHHHHHHHHHHhCCCCCceE-ecccccccCCceEecCCCCCCcCCCcccC-CCCC-ceEEEECCCC---
Confidence 677777773 3444666666643 8898 99999996432110 01 111111121 1122 2233443221
Q ss_pred CCCCCCCCccccccccCCCCeEEEEEccc-----cccc----------------ccccCCEEEEeeeeCCCCeEEEEeec
Q 007558 378 PLSPESPPRLVDLAHVQVGKQYELVVTTY-----AGLN----------------RYRVGDILLVTGYYNSAPQFRFVKRK 436 (598)
Q Consensus 378 ~~~~~~~~~~v~~~eve~G~~yelvvTt~-----~GL~----------------RYr~GDvV~v~gf~~~~P~i~f~gR~ 436 (598)
.++..|+.|||+|+.. .|+| .|+|||+++++ ....+.|+||.
T Consensus 443 -------------~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR~ 505 (637)
T PRK00174 443 -------------NPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRD----EDGYYWITGRV 505 (637)
T ss_pred -------------CCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEc----CCCcEEEEEec
Confidence 2346799999999751 2332 19999999997 36789999999
Q ss_pred CceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEeecCCCCCc-eEEEEEEEeecccCCCCChHHHHHHHHHHHH
Q 007558 437 NVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYADTTTIPG-HYVIFWELLVKDAANSPSDEVLNQCCLVVEE 515 (598)
Q Consensus 437 ~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~-~Y~l~~E~e~~~~~~~~~~~~l~~~~~~ld~ 515 (598)
+|++++.|++|.+.+||++|.+. .+ |.+..|+.......+ .-+.|+++.. + ...+.+..+++.+.+.+
T Consensus 506 dd~ik~~G~~v~p~eIE~~l~~~------~~--V~~~~Vvg~~~~~~g~~~~a~vv~~~-~--~~~~~~~~~~l~~~l~~ 574 (637)
T PRK00174 506 DDVLNVSGHRLGTAEIESALVAH------PK--VAEAAVVGRPDDIKGQGIYAFVTLKG-G--EEPSDELRKELRNWVRK 574 (637)
T ss_pred ccEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCeEEEEEEEECC-C--CCCCHHHHHHHHHHHHh
Confidence 99999999999999999999752 22 334444321111122 2335555532 2 12222333344444444
Q ss_pred HhChhhHhccccCCccCCeEEEEe------CCChHHHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhcccc
Q 007558 516 SLNSVYRQGRVADNSIGPLEIRVV------KNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVV 581 (598)
Q Consensus 516 ~Ln~~Y~~~R~~~g~l~p~~v~~v------~~gtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~~~~ 581 (598)
.|. .| ..|-.+.+| ..|...+-.=..+.+|.. +.+.+.-+.|++.++.+.+.+-
T Consensus 575 ~l~-~~---------~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 634 (637)
T PRK00174 575 EIG-PI---------AKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE--ILGDTSTLADPSVVEKLIEARQ 634 (637)
T ss_pred hcC-Cc---------cCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC--CCCCcccccCHHHHHHHHHHHh
Confidence 441 11 233344444 344444321111223332 4556667788999988876543
No 11
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.45 E-value=3.3e-11 Score=138.62 Aligned_cols=131 Identities=13% Similarity=0.063 Sum_probs=87.9
Q ss_pred ceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCC---CCCCCceeeecCCeEEEeecCCCCCCC
Q 007558 305 KYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMC---KPSEVSYTIMPNMGYFEFLPHDPNSPP 378 (598)
Q Consensus 305 ~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~ 378 (598)
+.++.+.+||. ....+.+++.+ |+++. +.||+||+...+...+.. +....+. ..|+ .-.+.++.+
T Consensus 380 ~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~-~~yG~TE~~~~~~~~~~~~~~~~~s~G~-p~~g-~~~~i~d~~----- 450 (647)
T PTZ00237 380 SNLKEIWCGGEVIEESIPEYIENKL-KIKSS-RGYGQTEIGITYLYCYGHINIPYNATGV-PSIF-IKPSILSED----- 450 (647)
T ss_pred chheEEEecCccCCHHHHHHHHHhc-CCCEE-eeechHHhChhhhccCCCCCCCCCCCcc-CcCC-ceEEEECCC-----
Confidence 34777777774 34456777777 68998 999999974322111100 0001111 1111 123333321
Q ss_pred CCCCCCCccccccccCCCCeEEEEEcc------cccccc---------------cccCCEEEEeeeeCCCCeEEEEeecC
Q 007558 379 LSPESPPRLVDLAHVQVGKQYELVVTT------YAGLNR---------------YRVGDILLVTGYYNSAPQFRFVKRKN 437 (598)
Q Consensus 379 ~~~~~~~~~v~~~eve~G~~yelvvTt------~~GL~R---------------Yr~GDvV~v~gf~~~~P~i~f~gR~~ 437 (598)
..+|.+|+.|||+++. ..|||+ |+|||+++++. ...+.|+||.+
T Consensus 451 -----------g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~----dG~l~i~GR~d 515 (647)
T PTZ00237 451 -----------GKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDE----NGYYTIVSRSD 515 (647)
T ss_pred -----------CCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECC----CCeEEEEeccC
Confidence 1245679999999963 356663 89999999983 67899999999
Q ss_pred ceecccccccCHHHHHHHHHHH
Q 007558 438 VLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 438 ~~l~~~GEki~e~~v~~av~~a 459 (598)
|+|++.|++|++.+||++|.+.
T Consensus 516 d~i~~~G~rI~p~eIE~~l~~~ 537 (647)
T PTZ00237 516 DQIKISGNKVQLNTIETSILKH 537 (647)
T ss_pred CEEEECCEEeCHHHHHHHHHhC
Confidence 9999999999999999999763
No 12
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.45 E-value=1.2e-10 Score=133.09 Aligned_cols=250 Identities=14% Similarity=0.105 Sum_probs=135.2
Q ss_pred CHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcC--CCCeecccccccccccc-ccCCC-
Q 007558 277 NPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSG--GLPLACTMYASSECFFG-LNMKP- 349 (598)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~--g~~v~~~~ygaSEg~~~-i~~~~- 349 (598)
.|...+.|.+...+. .... .++.|+++.+||. ....+.+.+.++ +++++ +.||+||+... +...+
T Consensus 337 ~P~~~~~l~~~~~~~-----~~~~--~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~ 408 (625)
T TIGR02188 337 APTAIRALMRLGDEW-----VKKH--DLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIV-DTWWQTETGGIMITPLPG 408 (625)
T ss_pred CHHHHHHHHhcCCcc-----cccC--CccceeEEEEecCCCCHHHHHHHHHHcCCCCCceE-ecccccccCCceeecCCC
Confidence 566666665543221 1111 2334788887774 334456666664 38898 99999996322 11101
Q ss_pred --CCCCCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccC-CCCeEEEEEccc-----ccccc----------
Q 007558 350 --MCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQ-VGKQYELVVTTY-----AGLNR---------- 411 (598)
Q Consensus 350 --~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve-~G~~yelvvTt~-----~GL~R---------- 411 (598)
...+...+. ..++ .-++.++.+ + ..++ +|+.|||+|+.. .|+|.
T Consensus 409 ~~~~~~~~~G~-p~~g-~~~~i~d~~--g--------------~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~ 470 (625)
T TIGR02188 409 ATPTKPGSATL-PFFG-IEPAVVDEE--G--------------NPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYF 470 (625)
T ss_pred CCCcCCCcccC-CcCC-ceEEEECCC--C--------------CCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHh
Confidence 011111111 1122 123333311 1 1345 799999999762 34432
Q ss_pred ------cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEee-cCCCCCc
Q 007558 412 ------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYA-DTTTIPG 484 (598)
Q Consensus 412 ------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~-d~~~~p~ 484 (598)
|+|||+++++. ...+.|+||.+|+|++.|++|.+.+||++|.+. .+ |.+..|+. +......
T Consensus 471 ~~~~g~~~TGDl~~~d~----dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~------p~--V~e~~vvg~~~~~~g~ 538 (625)
T TIGR02188 471 SPFPGYYFTGDGARRDK----DGYIWITGRVDDVINVSGHRLGTAEIESALVSH------PA--VAEAAVVGIPDDIKGQ 538 (625)
T ss_pred ccCCCEEECCceEEEcC----CCcEEEEecccCEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCe
Confidence 99999999984 578999999999999999999999999999763 12 33554432 1111112
Q ss_pred eEEEEEEEeecccCCCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEe------CCChHHHHHHHHHhcCCCC
Q 007558 485 HYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVV------KNGTFEELMDYAISRGASI 558 (598)
Q Consensus 485 ~Y~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v------~~gtF~~~~~~~~~~G~~~ 558 (598)
.-+.|+.+.. + ...+.+..+++.+.+.+.|.. | ..|-.|++| ..|-..+-.=..+..|..
T Consensus 539 ~~~a~vv~~~-~--~~~~~~~~~~l~~~~~~~l~~-~---------~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~- 604 (625)
T TIGR02188 539 AIYAFVTLKD-G--YEPDDELRKELRKHVRKEIGP-I---------AKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEE- 604 (625)
T ss_pred EEEEEEEeCC-C--CCCCHHHHHHHHHHHHhhcCC-C---------ccCcEEEECCCCCCCCCccchHHHHHHHHcCCC-
Confidence 3335666542 2 122233333444444444411 1 223333443 244433322112223431
Q ss_pred CCCCCCcccCCHhHHHHHhc
Q 007558 559 NQYKAPRCVSFTPILELLNG 578 (598)
Q Consensus 559 ~Q~K~Pr~~~~~~~~~~L~~ 578 (598)
.+++.+--+.|++.++.+++
T Consensus 605 ~~~~~~~~~~~p~~~~~~~~ 624 (625)
T TIGR02188 605 EILGDTSTLEDPSVVEELIE 624 (625)
T ss_pred CCCCCcccccCHHHHHHHHh
Confidence 23556667789999888764
No 13
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.44 E-value=8.2e-12 Score=140.43 Aligned_cols=152 Identities=16% Similarity=0.225 Sum_probs=98.2
Q ss_pred CHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCC-
Q 007558 277 NPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCK- 352 (598)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~- 352 (598)
.|..+..|.+..... ..-.++ ++.+++||. ....+++++.+++++++ +.||+||+...+...+...
T Consensus 280 ~P~~~~~l~~~~~~~------~~~~~~---lr~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~ 349 (539)
T PRK06334 280 TPVFFDYILKTAKKQ------ESCLPS---LRFVVIGGDAFKDSLYQEALKTFPHIQLR-QGYGTTECSPVITINTVNSP 349 (539)
T ss_pred cHHHHHHHHHhhhhc------cccccc---ccEEEECCccCCHHHHHHHHHHCCCCeEE-ecccccccCceEEeccCCCC
Confidence 666666665543221 011234 677787874 45667788888789998 9999999743221111100
Q ss_pred --CCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEcc---cccccc---------------c
Q 007558 353 --PSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR---------------Y 412 (598)
Q Consensus 353 --~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R---------------Y 412 (598)
+...+. ..++.. +..++.+. ..+|.+|+.|||+|.. ..|||. |
T Consensus 350 ~~~~~vG~-p~~g~~-v~i~d~~~---------------~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~ 412 (539)
T PRK06334 350 KHESCVGM-PIRGMD-VLIVSEET---------------KVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWY 412 (539)
T ss_pred CCCCcCce-ecCCCE-EEEEcCCC---------------CccCCCCceEEEEEecCcccccccCCcccccceeeCCceeE
Confidence 011122 122221 11222111 1245789999999964 356652 9
Q ss_pred ccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHH
Q 007558 413 RVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 413 r~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a 459 (598)
+|||+++++. ...+.|+||.+|+++++|++|++.|||.+|.+.
T Consensus 413 ~TGD~g~~d~----~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 413 VTGDLGYVDR----HGELFLKGRLSRFVKIGAEMVSLEALESILMEG 455 (539)
T ss_pred ECCCEEEECC----CCeEEEEeccCCeEEECCEEECHHHHHHHHHHc
Confidence 9999999984 678999999999999999999999999999763
No 14
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.41 E-value=7e-11 Score=133.45 Aligned_cols=151 Identities=20% Similarity=0.260 Sum_probs=98.1
Q ss_pred CHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCC-
Q 007558 277 NPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCK- 352 (598)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~- 352 (598)
.|...+.|.+...+.+. -+++ ++.+++||. ......+++.+ +++++ +.||+||+...+...+..+
T Consensus 317 ~P~~~~~l~~~~~~~~~------~~~~---lr~i~~gg~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~ 385 (573)
T PRK05605 317 VPPLYEKIAEAAEERGV------DLSG---VRNAFSGAMALPVSTVELWEKLT-GGLLV-EGYGLTETSPIIVGNPMSDD 385 (573)
T ss_pred hHHHHHHHHhCccccCC------Cchh---ccEEEECCCcCCHHHHHHHHHHh-CCCee-cccccchhchhhhcCCcccC
Confidence 56666666554332211 1234 677777774 34556666766 78888 9999999743221111111
Q ss_pred --CCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEcc---ccccc-------------cccc
Q 007558 353 --PSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLN-------------RYRV 414 (598)
Q Consensus 353 --~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~-------------RYr~ 414 (598)
+...+ ...++. .++.++.++.+ ..+..|+.|||+|++ ..|+| .|+|
T Consensus 386 ~~~~~~G-~~~~~~-~~~i~d~~~~~--------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~T 449 (573)
T PRK05605 386 RRPGYVG-VPFPDT-EVRIVDPEDPD--------------ETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRT 449 (573)
T ss_pred CcCCccc-cCCCCC-EEEEEcCCCCC--------------ccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCccc
Confidence 11111 122332 45566544311 134678899999975 36666 3999
Q ss_pred CCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 415 GDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 415 GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
||+++++. ...+.|+||.+|+++++|++|++.+||+++..
T Consensus 450 GD~~~~~~----~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~ 489 (573)
T PRK05605 450 GDVVVMEE----DGFIRIVDRIKELIITGGFNVYPAEVEEVLRE 489 (573)
T ss_pred CCEEEEcC----CCcEEEEeccccceeeCCEEECHHHHHHHHHh
Confidence 99999974 56899999999999999999999999999965
No 15
>PRK07529 AMP-binding domain protein; Validated
Probab=99.39 E-value=1.2e-10 Score=133.73 Aligned_cols=134 Identities=16% Similarity=0.228 Sum_probs=90.7
Q ss_pred eeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCC---CCCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 306 YLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMC---KPSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
.++.+++||. ....+++++.+ |++++ +.||+||+.......+.. .+...+.. .|.. -+.++..++.+
T Consensus 334 slr~v~~gg~~l~~~l~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~~-~p~~-~v~i~~~d~~g--- 406 (632)
T PRK07529 334 SLRYALCGAAPLPVEVFRRFEAAT-GVRIV-EGYGLTEATCVSSVNPPDGERRIGSVGLR-LPYQ-RVRVVILDDAG--- 406 (632)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHh-CCcEe-eeecccccCcccccCCccccccCCCcccc-cCCc-eEEEEEcCCCC---
Confidence 3778888874 45667788878 89999 999999975433222111 01111221 2222 23444333211
Q ss_pred CCCCCCccccccccCCCCeEEEEEcc---ccccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceeccc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTT---YAGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSID 443 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 443 (598)
. ...++.+|+.|||+|++ +.||+ -|+|||+++++. ...+.|+||.+|+++++
T Consensus 407 ------~--~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~~~ 474 (632)
T PRK07529 407 ------R--YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDA----DGYFWLTGRAKDLIIRG 474 (632)
T ss_pred ------c--ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcC----CceEEEEecccCEEEeC
Confidence 0 01245789999999975 35554 289999999984 67899999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDN 458 (598)
Q Consensus 444 GEki~e~~v~~av~~ 458 (598)
|++|++.+||++|.+
T Consensus 475 G~~i~p~eIE~~l~~ 489 (632)
T PRK07529 475 GHNIDPAAIEEALLR 489 (632)
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999976
No 16
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.39 E-value=9e-11 Score=131.87 Aligned_cols=128 Identities=16% Similarity=0.166 Sum_probs=87.0
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCC---CCCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMC---KPSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
++.+++||. ....+++++.+ +++++ +.||+||+.+.....+.. .+...+. ..++. -++.++.+.
T Consensus 325 lr~i~~gG~~l~~~~~~~~~~~~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-~~~~~-~~~i~d~~~------ 394 (549)
T PRK07788 325 LKIIFVSGSALSPELATRALEAF-GPVLY-NLYGSTEVAFATIATPEDLAEAPGTVGR-PPKGV-TVKILDENG------ 394 (549)
T ss_pred eeEEEEeCCCCCHHHHHHHHHHh-Cccce-eccCcchhchhhccChhhhhhcCCCccc-CCCCc-EEEEECCCc------
Confidence 777777773 45567777777 67888 999999964321111110 0111111 12222 344454321
Q ss_pred CCCCCccccccccCCCCeEEEEEccc---ccccc----------cccCCEEEEeeeeCCCCeEEEEeecCceeccccccc
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTTY---AGLNR----------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKT 447 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt~---~GL~R----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki 447 (598)
.++..|+.|||+|++. .||+. |+|||+++++. ...+.|+||.+|+++++|++|
T Consensus 395 ----------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~i~~~G~~v 460 (549)
T PRK07788 395 ----------NEVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDE----DGLLFVDGRDDDMIVSGGENV 460 (549)
T ss_pred ----------CCCCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEcC----CCCEEEeccCcceEEECCEEE
Confidence 1346799999999864 45552 79999999874 678999999999999999999
Q ss_pred CHHHHHHHHHH
Q 007558 448 DEAELQKGIDN 458 (598)
Q Consensus 448 ~e~~v~~av~~ 458 (598)
++.+||+++.+
T Consensus 461 ~p~eIE~~l~~ 471 (549)
T PRK07788 461 FPAEVEDLLAG 471 (549)
T ss_pred CHHHHHHHHHh
Confidence 99999999976
No 17
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.39 E-value=1.4e-10 Score=134.77 Aligned_cols=130 Identities=15% Similarity=0.170 Sum_probs=89.3
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCC--CCCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPM--CKPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~--~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++++++||. ....+++.+.+++++++ +.||+||+......... ..+...+ ...++. .++.++.+.
T Consensus 262 lr~i~~gGe~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~iG-~p~~~~-~v~i~d~~g------- 331 (705)
T PRK06060 262 LRCVVSAGEALELGLAERLMEFFGGIPIL-DGIGSTEVGQTFVSNRVDEWRLGTLG-RVLPPY-EIRVVAPDG------- 331 (705)
T ss_pred eeEEEEecCcCCHHHHHHHHHHcCCCceE-eeeeccccCceEEeccCCCCCcCccc-ccCCCc-EEEEECCCC-------
Confidence 778887773 45567778888789999 99999997422111110 0011111 122332 334444321
Q ss_pred CCCCccccccccCCCCeEEEEEcc---cccccc-----------cccCCEEEEeeeeCCCCeEEEEeecCceeccccccc
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLNR-----------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKT 447 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~R-----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki 447 (598)
..+.+|+.|||+|+. ..|||. |+|||+++++. ...+.|+||.+|+++++|++|
T Consensus 332 ---------~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~----dG~l~~~GR~dd~ik~~G~~v 398 (705)
T PRK06060 332 ---------TTAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDS----DGWVTYRCRADDTEVIGGVNV 398 (705)
T ss_pred ---------CCCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECC----CceEEEecccCceEEECCEEE
Confidence 134679999999975 356664 99999999873 568999999999999999999
Q ss_pred CHHHHHHHHHHH
Q 007558 448 DEAELQKGIDNA 459 (598)
Q Consensus 448 ~e~~v~~av~~a 459 (598)
...+||.+|.+.
T Consensus 399 ~~~eIE~~l~~~ 410 (705)
T PRK06060 399 DPREVERLIIED 410 (705)
T ss_pred CHHHHHHHHHhC
Confidence 999999999763
No 18
>PLN02654 acetate-CoA ligase
Probab=99.38 E-value=5.3e-10 Score=129.13 Aligned_cols=249 Identities=14% Similarity=0.146 Sum_probs=134.2
Q ss_pred CHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCC--CCeeccccccccccc-cccCCCC
Q 007558 277 NPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGG--LPLACTMYASSECFF-GLNMKPM 350 (598)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g--~~v~~~~ygaSEg~~-~i~~~~~ 350 (598)
.|..++.|.+...+. .... +++.++.+++||. ....+.+.+.+|+ +++. +.||+||+.. .+...+.
T Consensus 376 ~P~~~~~l~~~~~~~-----~~~~--~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~-~~yg~TE~g~~~~~~~~~ 447 (666)
T PLN02654 376 APTLVRSLMRDGDEY-----VTRH--SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS-DTWWQTETGGFMITPLPG 447 (666)
T ss_pred CHHHHHHHHhhCccc-----cccC--ChhheeEEEEecCCCCHHHHHHHHHHhCCCCCcee-ccccccccCCeeeccCCC
Confidence 566666665543211 1111 2344777777774 2344566677743 7888 9999999632 2111111
Q ss_pred C---CCCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEcc-----cccccc-----------
Q 007558 351 C---KPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTT-----YAGLNR----------- 411 (598)
Q Consensus 351 ~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt-----~~GL~R----------- 411 (598)
+ .+...+. ..++.. ...++.+ ..++..|+.|||+|+. ..|+|.
T Consensus 448 ~~~~~~gs~G~-p~~g~~-v~i~d~~----------------g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~ 509 (666)
T PLN02654 448 AWPQKPGSATF-PFFGVQ-PVIVDEK----------------GKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFK 509 (666)
T ss_pred CCCCCCCccCC-CCCCce-EEEECCC----------------CCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhh
Confidence 0 0111111 112211 1222211 1234567789999975 245543
Q ss_pred -----cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEee-cCCCCCce
Q 007558 412 -----YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYA-DTTTIPGH 485 (598)
Q Consensus 412 -----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~-d~~~~p~~ 485 (598)
|+|||+++++. ...+.|+||.+|+|++.|++|++.|||.+|.+.. + |.+-+|+. +.......
T Consensus 510 ~~~g~~~TGD~~~~d~----dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p------~--V~eaaVvg~~d~~~ge~ 577 (666)
T PLN02654 510 PFAGYYFSGDGCSRDK----DGYYWLTGRVDDVINVSGHRIGTAEVESALVSHP------Q--CAEAAVVGIEHEVKGQG 577 (666)
T ss_pred cCCCEEEeCceEEECC----CCcEEEeeeccCeEEeCCEEECHHHHHHHHHhCC------C--eeeEEEEeeEcCCCCeE
Confidence 89999999983 6789999999999999999999999999997631 2 33444432 11111223
Q ss_pred EEEEEEEeecccCCCCChHHHHHHHHHHHHHhChhhHhccccCCc-cCCeEEEEe------CCChHHHHHHHHHhcCCCC
Q 007558 486 YVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNS-IGPLEIRVV------KNGTFEELMDYAISRGASI 558 (598)
Q Consensus 486 Y~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~-l~p~~v~~v------~~gtF~~~~~~~~~~G~~~ 558 (598)
-+.|+.++. +. ..+.+..+++...+.+.| +. ..|-.|++| +.|-..+-.=..+..|. .
T Consensus 578 ~~a~Vvl~~-~~--~~~~~l~~~l~~~~~~~L-----------~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~-~ 642 (666)
T PLN02654 578 IYAFVTLVE-GV--PYSEELRKSLILTVRNQI-----------GAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ-L 642 (666)
T ss_pred EEEEEEECC-CC--CCCHHHHHHHHHHHHHhC-----------CCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC-C
Confidence 345666542 21 222333333333333333 22 234455555 23432221111112342 2
Q ss_pred CCCCCCcccCCHhHHHHHhc
Q 007558 559 NQYKAPRCVSFTPILELLNG 578 (598)
Q Consensus 559 ~Q~K~Pr~~~~~~~~~~L~~ 578 (598)
.+.+.+--+.|++.++.+.+
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~ 662 (666)
T PLN02654 643 DELGDTSTLADPGVVDQLIA 662 (666)
T ss_pred CCCCCcccccCHHHHHHHHH
Confidence 26777888889999988764
No 19
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.36 E-value=2.2e-10 Score=129.43 Aligned_cols=129 Identities=15% Similarity=0.174 Sum_probs=87.4
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-ccccCCC--CCCCCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-FGLNMKP--MCKPSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~--~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
++++++||. ......+++.+ |++++ +.||+||.. +.+...+ ...+...+. ..|+ ..++.++.+.
T Consensus 325 lr~~~~gG~~l~~~~~~~~~~~~-g~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~g-~~~~i~d~~~------ 394 (570)
T PRK04319 325 LRHILSVGEPLNPEVVRWGMKVF-GLPIH-DNWWMTETGGIMIANYPAMDIKPGSMGK-PLPG-IEAAIVDDQG------ 394 (570)
T ss_pred ceEEEEcccCCCHHHHHHHHHHh-CCCeE-eceeecccCCEEEecCCCCCCCCCcCcC-CCCC-CEEEEECCCC------
Confidence 677777773 34556677777 78888 999999963 2221111 011111121 1222 2344554321
Q ss_pred CCCCCccccccccCCCCeEEEEEcc-----ccccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceecc
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTT-----YAGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSI 442 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt-----~~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 442 (598)
.++++|+.|||+|+. +.||| -|+|||+++++. ...+.|+||.+|++++
T Consensus 395 ----------~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~----~g~l~~~GR~~d~i~~ 460 (570)
T PRK04319 395 ----------NELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDE----DGYFWFQGRVDDVIKT 460 (570)
T ss_pred ----------CCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECC----CeeEEEEecCCCEEEE
Confidence 134679999999964 24665 289999999984 6689999999999999
Q ss_pred cccccCHHHHHHHHHHH
Q 007558 443 DSDKTDEAELQKGIDNA 459 (598)
Q Consensus 443 ~GEki~e~~v~~av~~a 459 (598)
+|++|++.+||.++.+.
T Consensus 461 ~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 461 SGERVGPFEVESKLMEH 477 (570)
T ss_pred CCEEECHHHHHHHHhhC
Confidence 99999999999999763
No 20
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.36 E-value=1.9e-10 Score=129.75 Aligned_cols=132 Identities=15% Similarity=0.150 Sum_probs=88.7
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccc-ccc-CCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFF-GLN-MKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~-~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++++.+||. ...++++.+.+++++++ +.||+||+.. ... ...................-.+.+++++.
T Consensus 321 lr~~~~gg~~l~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g------ 393 (560)
T PLN02574 321 LKQVSCGAAPLSGKFIQDFVQTLPHVDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTG------ 393 (560)
T ss_pred ceEEEEecccCCHHHHHHHHHHCCCCcEE-ecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCC------
Confidence 667777763 35566777777789999 9999999742 211 11111000111212212233444543321
Q ss_pred CCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecccc
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDS 444 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 444 (598)
.++..|+.|||+|+. ..|||. |+|||+++++. ...+.|+||.+|++++.|
T Consensus 394 ---------~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~d~i~~~G 460 (560)
T PLN02574 394 ---------CLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDE----DGYLYIVDRLKEIIKYKG 460 (560)
T ss_pred ---------cCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEEC----CCeEEEEecchhheEECC
Confidence 245679999999975 355553 99999999984 678999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDN 458 (598)
Q Consensus 445 Eki~e~~v~~av~~ 458 (598)
++|++.+||.++..
T Consensus 461 ~~v~~~eiE~~l~~ 474 (560)
T PLN02574 461 FQIAPADLEAVLIS 474 (560)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999965
No 21
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.35 E-value=2.6e-10 Score=126.30 Aligned_cols=150 Identities=15% Similarity=0.192 Sum_probs=96.8
Q ss_pred CCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-ccccCCCCC
Q 007558 276 PNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-FGLNMKPMC 351 (598)
Q Consensus 276 ~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~~ 351 (598)
..|..+..|.+...+. ...+++ ++.+..||. ...++.+++.+ +++++ +.||+||.. ++.......
T Consensus 261 ~~p~~~~~l~~~~~~~------~~~~~~---l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~ 329 (521)
T PRK06187 261 AVPTIWQMLLKAPRAY------FVDFSS---LRLVIYGGAALPPALLREFKEKF-GIDLV-QGYGMTETSPVVSVLPPED 329 (521)
T ss_pred chHHHHHHHHcCcCCC------ccCcch---hhEEEEcCcCCCHHHHHHHHHHh-Ccchh-eeeccCccCcccccCCccc
Confidence 3677777766554331 123345 566666662 45667777878 89999 999999963 222111000
Q ss_pred -------CCCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCC--CCeEEEEEccc---cccc-c-------
Q 007558 352 -------KPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQV--GKQYELVVTTY---AGLN-R------- 411 (598)
Q Consensus 352 -------~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~--G~~yelvvTt~---~GL~-R------- 411 (598)
.....+. ..++ ..++.++++.. ++.. |+.|||++++. .|++ +
T Consensus 330 ~~~~~~~~~~~~G~-~~~~-~~~~i~~~~~~----------------~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~ 391 (521)
T PRK06187 330 QLPGQWTKRRSAGR-PLPG-VEARIVDDDGD----------------ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAET 391 (521)
T ss_pred ccccccccCCcccc-ccCC-eEEEEECCCCC----------------CCCCCCCCeeEEEEECcchhhhhcCCHHHHHHH
Confidence 0001111 1222 23455553321 2344 99999999864 4544 3
Q ss_pred -----cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 412 -----YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 412 -----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
|+|||+++++. ...+.+.||.+++++++|+++++.+||+++.+
T Consensus 392 ~~~~~~~tGD~~~~~~----~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~ 439 (521)
T PRK06187 392 IDGGWLHTGDVGYIDE----DGYLYITDRIKDVIISGGENIYPRELEDALYG 439 (521)
T ss_pred hhCCceeccceEEEcC----CCCEEEeecccceEEcCCeEECHHHHHHHHHh
Confidence 99999999974 56799999999999999999999999998865
No 22
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.35 E-value=2.8e-10 Score=126.05 Aligned_cols=129 Identities=16% Similarity=0.214 Sum_probs=88.1
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccC--CCCCCCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNM--KPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~--~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++++++||. ....+.+++.+ +++++ +.||+||+.+.... ...+.+...+ ...++ .....+++++.
T Consensus 271 lr~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G-~~~~~-~~v~i~d~~~~------ 340 (504)
T PRK07514 271 MRLFISGSAPLLAETHREFQERT-GHAIL-ERYGMTETNMNTSNPYDGERRAGTVG-FPLPG-VSLRVTDPETG------ 340 (504)
T ss_pred eeeEEecCCCCCHHHHHHHHHHh-CCcce-eecccccccccccCCccccccCcccc-cCCCC-cEEEEEECCCC------
Confidence 788887774 34456667777 68888 99999997432211 1111111111 11222 33444543321
Q ss_pred CCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecccc
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDS 444 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 444 (598)
..+..|+.+||+|++ ..|||+ |+|||+++++. ...+.|+||.++++++.|
T Consensus 341 ---------~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR~~~~i~~~G 407 (504)
T PRK07514 341 ---------AELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE----RGYVHIVGRGKDLIISGG 407 (504)
T ss_pred ---------CCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC----CccEEEeccccceEEeCC
Confidence 134678999999976 466765 99999999984 567999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDN 458 (598)
Q Consensus 445 Eki~e~~v~~av~~ 458 (598)
+++++.+||+++.+
T Consensus 408 ~~i~~~~IE~~l~~ 421 (504)
T PRK07514 408 YNVYPKEVEGEIDE 421 (504)
T ss_pred eEECHHHHHHHHHh
Confidence 99999999999965
No 23
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.35 E-value=1.7e-10 Score=129.77 Aligned_cols=128 Identities=13% Similarity=0.136 Sum_probs=87.0
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCC----CCCceeeecCCeEEEeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKP----SEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~----~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
++++++||. ....+.+++.+ +++++ +.||+||+.......+.... ...+. ..++. -++.++.+
T Consensus 314 l~~~~~~G~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~~~~-~v~i~d~~------ 383 (547)
T PRK13295 314 LRTFLCAGAPIPGALVERARAAL-GAKIV-SAWGMTENGAVTLTKLDDPDERASTTDGC-PLPGV-EVRVVDAD------ 383 (547)
T ss_pred ceEEEEecCCCCHHHHHHHHHHh-CCCeE-EeccCCCCCCeeeccCCCcchhccCcccc-ccCCc-EEEEECCC------
Confidence 677777773 45667777778 89999 99999996332111111000 00111 11221 23444322
Q ss_pred CCCCCCccccccccCCCCeEEEEEcc---cccccc------------cccCCEEEEeeeeCCCCeEEEEeecCceecccc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDS 444 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 444 (598)
..++..|+.+||+|+. +.|+|. |+|||+++++. .+.+.|+||.++++++.|
T Consensus 384 ----------~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~~----~g~l~~~gR~~~~i~~~G 449 (547)
T PRK13295 384 ----------GAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARIDA----DGYIRISGRSKDVIIRGG 449 (547)
T ss_pred ----------CCCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEcC----CceEEEEeccCCeEEECC
Confidence 1245678999999975 366653 99999999974 668999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDN 458 (598)
Q Consensus 445 Eki~e~~v~~av~~ 458 (598)
+||++.+||.+|.+
T Consensus 450 ~~v~p~~IE~~l~~ 463 (547)
T PRK13295 450 ENIPVVEIEALLYR 463 (547)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999975
No 24
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.35 E-value=5.5e-10 Score=127.83 Aligned_cols=131 Identities=11% Similarity=0.116 Sum_probs=86.4
Q ss_pred ceeEEEEeCch---hhhHHHHHhhcCCCCeecccccccccccc-ccCCCCC-----CCCCCceeeecCCeEEEeecCCCC
Q 007558 305 KYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFG-LNMKPMC-----KPSEVSYTIMPNMGYFEFLPHDPN 375 (598)
Q Consensus 305 ~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~-i~~~~~~-----~~~~~~~~l~~~~~ffEFip~~~~ 375 (598)
..++.+++||. ....+.+++.+ +++++ +.||+||.... +...+.. .+...+. ..++. -++.++.++.
T Consensus 355 ~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~-p~~g~-~~~i~d~~~g 430 (629)
T PRK10524 355 SSLRALFLAGEPLDEPTASWISEAL-GVPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGV-PMYGY-NVKLLNEVTG 430 (629)
T ss_pred hheeEEEEeCCCCCHHHHHHHHHhc-CCCeE-eccccccccchhhcCCCCcccCcCCCCCccc-CcCCc-eEEEEeCCCC
Confidence 34788888874 34456677777 78999 99999997421 1111100 0111111 11222 1334443111
Q ss_pred CCCCCCCCCCccccccccCCCCeEEEEEccc------cccc-----------------ccccCCEEEEeeeeCCCCeEEE
Q 007558 376 SPPLSPESPPRLVDLAHVQVGKQYELVVTTY------AGLN-----------------RYRVGDILLVTGYYNSAPQFRF 432 (598)
Q Consensus 376 ~~~~~~~~~~~~v~~~eve~G~~yelvvTt~------~GL~-----------------RYr~GDvV~v~gf~~~~P~i~f 432 (598)
.++..|+.|||+|+.. .|+| -|+|||+++++ ....+.|
T Consensus 431 ---------------~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d----~dG~l~i 491 (629)
T PRK10524 431 ---------------EPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRD----ADGYYFI 491 (629)
T ss_pred ---------------CCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEc----CCCcEEE
Confidence 1356799999999753 2332 29999999987 3678999
Q ss_pred EeecCceecccccccCHHHHHHHHHH
Q 007558 433 VKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 433 ~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
+||.+|+|++.|++|.+.+||++|.+
T Consensus 492 ~GR~dd~i~~~G~ri~p~eIE~~l~~ 517 (629)
T PRK10524 492 LGRTDDVINVAGHRLGTREIEESISS 517 (629)
T ss_pred EEEecCeEEeCCEEeCHHHHHHHHHh
Confidence 99999999999999999999999975
No 25
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.34 E-value=1e-10 Score=131.48 Aligned_cols=128 Identities=17% Similarity=0.232 Sum_probs=87.2
Q ss_pred eEEEEeCch-hhhHHHHHhhcCCCCeeccccccccccccccCC-CCCCCCCCceeeecCCeEEEeecCCCCCCCCCCCCC
Q 007558 307 LDVIVTGAM-AQYIPTLDHYSGGLPLACTMYASSECFFGLNMK-PMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESP 384 (598)
Q Consensus 307 l~~~~~g~~-~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~ 384 (598)
++.+.+|+. ...++.+++.+ +++++ +.||+||+...+... +...+...+. ..+ ..-+++++.+.
T Consensus 296 l~~~~~g~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~vG~-~~~-~~~~~i~d~~~---------- 361 (542)
T PRK06155 296 VRVALGPGVPAALHAAFRERF-GVDLL-DGYGSTETNFVIAVTHGSQRPGSMGR-LAP-GFEARVVDEHD---------- 361 (542)
T ss_pred eEEEEEcCCCHHHHHHHHHHc-CCCEE-eeecccccCccccCCCCCCCCCCcCc-cCC-CceEEEECCCC----------
Confidence 555666664 34556777777 79999 999999974322111 1111111111 122 23345554221
Q ss_pred CccccccccCCCCeEEEEEccc------cccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceeccccc
Q 007558 385 PRLVDLAHVQVGKQYELVVTTY------AGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSD 445 (598)
Q Consensus 385 ~~~v~~~eve~G~~yelvvTt~------~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GE 445 (598)
.++..|+.|||+|++. .|+| +|+|||+++++. ...+.|+||.+|++++.|+
T Consensus 362 ------~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~----dG~l~i~GR~~d~i~~~G~ 431 (542)
T PRK06155 362 ------QELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDA----DGWFRFVDRIKDAIRRRGE 431 (542)
T ss_pred ------CCCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcC----CceEEEEecCCCEEEeCCE
Confidence 2456789999999763 4554 599999999973 6689999999999999999
Q ss_pred ccCHHHHHHHHHH
Q 007558 446 KTDEAELQKGIDN 458 (598)
Q Consensus 446 ki~e~~v~~av~~ 458 (598)
++++.+||++|.+
T Consensus 432 ~v~p~eIE~~l~~ 444 (542)
T PRK06155 432 NISSFEVEQVLLS 444 (542)
T ss_pred EECHHHHHHHHHh
Confidence 9999999999976
No 26
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.33 E-value=9.6e-11 Score=132.20 Aligned_cols=128 Identities=19% Similarity=0.294 Sum_probs=88.6
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCC--CCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMC--KPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++++++||. ....+.+++.+ |++++ +.||+||+...+...+.. .+...+. ..++ ...+.++++.
T Consensus 328 lr~v~~gG~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~vG~-~~~~-~~v~i~d~~~------- 396 (562)
T PRK05677 328 LKLTLSGGMALQLATAERWKEVT-GCAIC-EGYGMTETSPVVSVNPSQAIQVGTIGI-PVPS-TLCKVIDDDG------- 396 (562)
T ss_pred ceEEEEcCccCCHHHHHHHHHHc-CCCee-ccCCccccCcceeecCccCCCCCccCc-cCCC-CEEEEECCCC-------
Confidence 778888874 34556677777 78999 999999974322211111 1111222 2222 2445554321
Q ss_pred CCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecccc
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDS 444 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 444 (598)
.+|..|+.|||+|++ ..|||. |+|||+++++. ...+.|.||.+|++++.|
T Consensus 397 ---------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~d~i~~~G 463 (562)
T PRK05677 397 ---------NELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE----DGYMRIVDRKKDMILVSG 463 (562)
T ss_pred ---------CCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC----CCcEEEEecCcCeEEeCC
Confidence 145679999999964 356653 99999999984 568999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDN 458 (598)
Q Consensus 445 Eki~e~~v~~av~~ 458 (598)
++|++.+||++|.+
T Consensus 464 ~~i~p~eiE~~l~~ 477 (562)
T PRK05677 464 FNVYPNELEDVLAA 477 (562)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999965
No 27
>PRK09274 peptide synthase; Provisional
Probab=99.33 E-value=1.8e-10 Score=129.43 Aligned_cols=161 Identities=13% Similarity=0.131 Sum_probs=98.5
Q ss_pred CHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcC-CCCeeccccccccccccccCCCCC-
Q 007558 277 NPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSG-GLPLACTMYASSECFFGLNMKPMC- 351 (598)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~-g~~v~~~~ygaSEg~~~i~~~~~~- 351 (598)
.|..+..|.+.....+ .-.|+ ++.+++||. ...++++++.++ |++++ +.||+||+..........
T Consensus 269 ~P~~~~~l~~~~~~~~------~~~~~---lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~ 338 (552)
T PRK09274 269 SPALLERLGRYGEANG------IKLPS---LRRVISAGAPVPIAVIERFRAMLPPDAEIL-TPYGATEALPISSIESREI 338 (552)
T ss_pred cHHHHHHHHHHhhhcC------CCCch---hhEEEecCCcCCHHHHHHHHHHcCCCceEE-ccccccccceeEeecchhh
Confidence 6666766665443211 12244 677777774 456778888886 48888 999999974221111100
Q ss_pred -------CCCCC---ceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEcc---cccc---------
Q 007558 352 -------KPSEV---SYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGL--------- 409 (598)
Q Consensus 352 -------~~~~~---~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL--------- 409 (598)
..... -....++. -+..++.++.. .+..-...++..|+.|||+|.. ..||
T Consensus 339 ~~~~~~~~~~~~~~~vG~~~~~~-~~~ivd~~~~~-------~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~ 410 (552)
T PRK09274 339 LFATRAATDNGAGICVGRPVDGV-EVRIIAISDAP-------IPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRL 410 (552)
T ss_pred hccccccccCCCCcccCccCCCc-eEEEEeccccc-------cccccccccCCCCCeeEEEEecCcccccccCChHHhhh
Confidence 00000 01112222 23344422110 0000012456789999999953 2333
Q ss_pred ---------cccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHH
Q 007558 410 ---------NRYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 410 ---------~RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a 459 (598)
..|+|||+++++. ...+.|+||.+|+++++|+++++.+||+++.+.
T Consensus 411 ~~~~~~~g~~w~~TGDlg~~d~----dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (552)
T PRK09274 411 AKIPDGQGDVWHRMGDLGYLDA----QGRLWFCGRKAHRVETAGGTLYTIPCERIFNTH 465 (552)
T ss_pred hhcccCCCCcEEEcCCEEEEcc----CCcEEEEeccCCeEEECCEEECcHHHHHHHHhC
Confidence 2699999999984 678999999999999999999999999999763
No 28
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.32 E-value=5e-10 Score=125.62 Aligned_cols=130 Identities=20% Similarity=0.289 Sum_probs=87.0
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccc-cccCCCCC--CCCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFF-GLNMKPMC--KPSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
+++++.||. ....+.+++.+ +++++ +.||+||+.. +....... .+...++++ +.. -++.+..++.+
T Consensus 314 l~~i~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~-~~~-~~~v~~~d~~~---- 385 (541)
T TIGR03205 314 LATIGSGGAPLPVEVANFFERKT-GLKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGLML-PGI-ELDVVSLDDPT---- 385 (541)
T ss_pred cceEEEccccCCHHHHHHHHHHh-CCCee-cccccccCCcccccCCCCCCCCCCCcceec-cCc-eeEEEecCCCC----
Confidence 677787774 34456677777 78998 9999999743 22111111 111223322 222 22322322211
Q ss_pred CCCCCccccccccCCCCeEEEEEcc---ccccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceecccc
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTT---YAGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDS 444 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt---~~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 444 (598)
.++++|+.|||++++ ..||| +|+|||++++.. ...+.|+||.++++++.|
T Consensus 386 ----------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~i~GR~~~~i~~~G 451 (541)
T TIGR03205 386 ----------KVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDT----DGYFFLVDRKKDMIISGG 451 (541)
T ss_pred ----------ccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcC----CceEEEEccccCeEEECC
Confidence 234679999999986 34555 589999999973 568999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDN 458 (598)
Q Consensus 445 Eki~e~~v~~av~~ 458 (598)
+++++.+||.++.+
T Consensus 452 ~~i~~~eIE~~l~~ 465 (541)
T TIGR03205 452 FNVYPQMIEQAIYE 465 (541)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999976
No 29
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.31 E-value=1.8e-09 Score=123.84 Aligned_cols=131 Identities=11% Similarity=0.066 Sum_probs=85.5
Q ss_pred ceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccc-cCCCCC-----CCCCCceeeecCCeEEEeecCCCC
Q 007558 305 KYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGL-NMKPMC-----KPSEVSYTIMPNMGYFEFLPHDPN 375 (598)
Q Consensus 305 ~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i-~~~~~~-----~~~~~~~~l~~~~~ffEFip~~~~ 375 (598)
+.++.+++||. ......+++.+ +++++ +.||+||....+ ...+.. ..+..+. ..|+.. ...++.++
T Consensus 354 ~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~-~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~-p~~g~~-v~i~d~~~- 428 (628)
T TIGR02316 354 SSLHWLFLAGEPLDEPTAHWITDGL-GKPVI-DNYWQTETGWPVLAIMPGLDLKPVKLGSPGL-PMYGYH-LRVLDEAT- 428 (628)
T ss_pred cceeEEEEecCCCCHHHHHHHHHHh-CCCEE-ecccccccCceeecCCCCCCcCCCCCCCccc-CcCCce-EEEEECCC-
Confidence 34788887773 34556666777 78888 999999964222 111110 0011111 112221 22233211
Q ss_pred CCCCCCCCCCccccccccCCCCeEEEEEccc------cccc-----------------ccccCCEEEEeeeeCCCCeEEE
Q 007558 376 SPPLSPESPPRLVDLAHVQVGKQYELVVTTY------AGLN-----------------RYRVGDILLVTGYYNSAPQFRF 432 (598)
Q Consensus 376 ~~~~~~~~~~~~v~~~eve~G~~yelvvTt~------~GL~-----------------RYr~GDvV~v~gf~~~~P~i~f 432 (598)
..++..|+.|||+|+.. .|+| -|+|||+++++. ...+.|
T Consensus 429 --------------g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~----dG~l~i 490 (628)
T TIGR02316 429 --------------GRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDE----DGYTFI 490 (628)
T ss_pred --------------CCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcC----CCcEEE
Confidence 12356789999999753 3333 299999999884 678999
Q ss_pred EeecCceecccccccCHHHHHHHHHH
Q 007558 433 VKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 433 ~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
+||.+|+|++.|++|.+.|||.+|.+
T Consensus 491 ~GR~dd~ik~~G~rv~~~eIE~~l~~ 516 (628)
T TIGR02316 491 LGRTDDVINVAGHRLGTREIEESVSS 516 (628)
T ss_pred EEcCcceEEeCCEEeCHHHHHHHHHh
Confidence 99999999999999999999999975
No 30
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.31 E-value=4.2e-10 Score=124.68 Aligned_cols=150 Identities=17% Similarity=0.146 Sum_probs=95.3
Q ss_pred CCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCC-Ceeccccccccc-cccccCCCC
Q 007558 276 PNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGL-PLACTMYASSEC-FFGLNMKPM 350 (598)
Q Consensus 276 ~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~-~v~~~~ygaSEg-~~~i~~~~~ 350 (598)
..|.....|.+.....+ . .+..++.+++||. ...++.+++.+ ++ +++ +.||+||+ .++......
T Consensus 261 ~~p~~~~~l~~~~~~~~------~---~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~-~~YG~tE~~~~~~~~~~~ 329 (513)
T PRK07656 261 GPPTMYNSLLQHPDRSA------E---DLSSLRLAVTGAASMPVALLERFESEL-GVDIVL-TGYGLSEASGVTTFNRLD 329 (513)
T ss_pred chHHHHHHHHcCCCcCC------C---CccceeeEEecCCCCCHHHHHHHHHHc-CCCceE-eEEccccCCCceeecCcc
Confidence 36766666655432211 1 2233777777773 35567777778 56 787 99999997 332110000
Q ss_pred CC----CCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEccc---ccccc------------
Q 007558 351 CK----PSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTTY---AGLNR------------ 411 (598)
Q Consensus 351 ~~----~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~R------------ 411 (598)
.. +...+ ...++ .-++.++++ ...++.|+.|||++++. .|+|.
T Consensus 330 ~~~~~~~~~vG-~~~~~-~~~~i~d~~----------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 391 (513)
T PRK07656 330 DDRKTVAGTIG-TAIAG-VENKIVNEL----------------GEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDAD 391 (513)
T ss_pred ccccccCCCcc-ccCCC-cEEEEECCC----------------CCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccC
Confidence 00 00011 11122 234444322 12456799999999754 34442
Q ss_pred --cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 412 --YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 412 --Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
|+|||+++++. ...+.++||.+|++++.|++++..+||++|.+
T Consensus 392 ~~~~tGDl~~~~~----~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 436 (513)
T PRK07656 392 GWLHTGDLGRLDE----EGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYE 436 (513)
T ss_pred CceeccceEEEcC----CeeEEEEecccceEEeCCEEeCHHHHHHHHHh
Confidence 89999999973 66899999999999999999999999999965
No 31
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.31 E-value=1.7e-10 Score=127.58 Aligned_cols=129 Identities=17% Similarity=0.157 Sum_probs=88.4
Q ss_pred eEEEEeCch--hhhHHHHHhhcCCCCeeccccccccccccccCCCCC---CCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM--AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMC---KPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~--~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++.+.+|+. .....++++.+|+++++ +.||+||+.......+.. .+...+. ..++ ..++.++.+.
T Consensus 256 ~~~~~~G~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~g------- 325 (487)
T PRK07638 256 MKIISSGAKWEAEAKEKIKNIFPYAKLY-EFYGASELSFVTALVDEESERRPNSVGR-PFHN-VQVRICNEAG------- 325 (487)
T ss_pred eEEEEcCCCCCHHHHHHHHHHcCCCeEE-EEecCCccCceEEecccccCCCCCCCCc-ccCC-cEEEEECCCC-------
Confidence 455555552 45567788888889998 899999974322111111 0111121 1222 3455554321
Q ss_pred CCCCccccccccCCCCeEEEEEcc---cccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceeccccc
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSD 445 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GE 445 (598)
.++++|+.|||+|++ ..|+|. |+|||+++++. ...+.|+||.+|++++.|+
T Consensus 326 ---------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~----~g~l~i~GR~~d~i~~~G~ 392 (487)
T PRK07638 326 ---------EEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDE----EGFIYIVGREKNMILFGGI 392 (487)
T ss_pred ---------CCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcC----CCeEEEEecCCCeEEeCCE
Confidence 245779999999975 356553 79999999874 6789999999999999999
Q ss_pred ccCHHHHHHHHHH
Q 007558 446 KTDEAELQKGIDN 458 (598)
Q Consensus 446 ki~e~~v~~av~~ 458 (598)
++++.+||+++.+
T Consensus 393 ~v~~~eiE~~l~~ 405 (487)
T PRK07638 393 NIFPEEIESVLHE 405 (487)
T ss_pred EECHHHHHHHHHh
Confidence 9999999999976
No 32
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.30 E-value=3.1e-09 Score=122.40 Aligned_cols=231 Identities=16% Similarity=0.131 Sum_probs=126.9
Q ss_pred CCceeEEEEeCch---hhhHHHHHhhcC-CCCeeccccccccccccccCC-CCCC--CCCCceeeecCCeEEEeecCCCC
Q 007558 303 NTKYLDVIVTGAM---AQYIPTLDHYSG-GLPLACTMYASSECFFGLNMK-PMCK--PSEVSYTIMPNMGYFEFLPHDPN 375 (598)
Q Consensus 303 ~l~~l~~~~~g~~---~~y~~~l~~~~~-g~~v~~~~ygaSEg~~~i~~~-~~~~--~~~~~~~l~~~~~ffEFip~~~~ 375 (598)
++..|+++++||. ....+.+.+.++ ++++. +.||+||...++... +..+ +...+. ..++. -+..++.+
T Consensus 381 ~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g~-~~~ivd~~-- 455 (655)
T PRK03584 381 DLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLA-SISGGTDICSCFVGGNPLLPVYRGEIQC-RGLGM-AVEAWDED-- 455 (655)
T ss_pred ChhheEEEEEecCCCCHHHHHHHHHHhCCCceEE-eccChHhhhcccccCCCCCCcCCCccCC-CcCCc-eeEEECCC--
Confidence 3445888888874 344556666663 58888 999999953222111 1000 001111 11221 12222221
Q ss_pred CCCCCCCCCCccccccccCCCCeEEEEEccc-----ccccc------------------cccCCEEEEeeeeCCCCeEEE
Q 007558 376 SPPLSPESPPRLVDLAHVQVGKQYELVVTTY-----AGLNR------------------YRVGDILLVTGYYNSAPQFRF 432 (598)
Q Consensus 376 ~~~~~~~~~~~~v~~~eve~G~~yelvvTt~-----~GL~R------------------Yr~GDvV~v~gf~~~~P~i~f 432 (598)
+ .++ .|+.|||+|+.. .|||. |+|||+++++. ...+.|
T Consensus 456 g--------------~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~i 516 (655)
T PRK03584 456 G--------------RPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITE----HGGVVI 516 (655)
T ss_pred C--------------CCC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECC----CCeEEE
Confidence 1 133 588999999752 34442 78999999973 678999
Q ss_pred EeecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEee-cCCCCCceEEEEEEEeecccCCCCChHHHHHHHH
Q 007558 433 VKRKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYA-DTTTIPGHYVIFWELLVKDAANSPSDEVLNQCCL 511 (598)
Q Consensus 433 ~gR~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~-d~~~~p~~Y~l~~E~e~~~~~~~~~~~~l~~~~~ 511 (598)
+||.+|+|+++|++|.+.|||.+|.+.. + |.+-+|+. +.......-++|+++.. + ...+.+..+++.+
T Consensus 517 ~GR~dd~Ik~~G~rI~p~EIE~~l~~~p------~--V~ea~vvg~~~~~~g~~~~a~vv~~~-~--~~~~~~~~~~l~~ 585 (655)
T PRK03584 517 YGRSDATLNRGGVRIGTAEIYRQVEALP------E--VLDSLVIGQEWPDGDVRMPLFVVLAE-G--VTLDDALRARIRT 585 (655)
T ss_pred EeeccCeeecCcEEECHHHHHHHHHhCC------C--cceEEEEeeEcCCCCEEEEEEEEECC-C--CCCcHHHHHHHHH
Confidence 9999999999999999999999997631 2 23444332 11112224456777652 2 1223333334444
Q ss_pred HHHHHhChhhHhccccCCccCCeEEEEeC------CChHHHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhc
Q 007558 512 VVEESLNSVYRQGRVADNSIGPLEIRVVK------NGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNG 578 (598)
Q Consensus 512 ~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~------~gtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~ 578 (598)
.+.+.|. .| ..|-.|.+|. .|--.+..=..+..|...+|...+.-+.|++.++.+.+
T Consensus 586 ~~~~~L~-~~---------~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (655)
T PRK03584 586 TIRTNLS-PR---------HVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVKKAVNRDALANPEALDWFAD 648 (655)
T ss_pred HHHhhCC-CC---------cCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCCcccccCHHHHHHHHH
Confidence 4444441 11 2344455543 33322211111224655555546666778988887754
No 33
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.29 E-value=8e-10 Score=123.57 Aligned_cols=128 Identities=14% Similarity=0.184 Sum_probs=86.6
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCC----CCCceeeecCCeEEEeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKP----SEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~----~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
++++++||. ......+++.+ |++++ +.||+||+.+.... ...+. ...+..+.+ ....+.++.+ +
T Consensus 301 lr~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~-~~~~~~~~~~~~G~~~~~-~~~v~i~d~~--g--- 371 (527)
T TIGR02275 301 LKLLQVGGAKFSEAAARRVPAVF-GCQLQ-QVFGMAEGLVNYTR-LDDPAEIIFTTQGRPMSP-DDEVRVVDDH--G--- 371 (527)
T ss_pred eEEEEEcCCCCCHHHHHHHHHHh-CCeEE-eeeccCccCccccC-CCCccccccccCCCCCCC-CceEEEECCC--C---
Confidence 788888874 35566777777 78988 99999997543211 00000 011221111 1123333321 1
Q ss_pred CCCCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI 442 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 442 (598)
..++.|+.+||+++. ..|+|. |+|||+++++. ...+.|+||.+|++++
T Consensus 372 -----------~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~~~gR~~d~i~~ 436 (527)
T TIGR02275 372 -----------NPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTP----EGYIVVVGRAKDQINR 436 (527)
T ss_pred -----------CCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcC----CccEEEEecccceeec
Confidence 134679999999964 456653 99999999973 6688999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007558 443 DSDKTDEAELQKGIDN 458 (598)
Q Consensus 443 ~GEki~e~~v~~av~~ 458 (598)
+|+++.+.+||++|.+
T Consensus 437 ~G~~v~~~eiE~~l~~ 452 (527)
T TIGR02275 437 GGEKIAAEEIENLLLA 452 (527)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999975
No 34
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.28 E-value=8.7e-10 Score=123.59 Aligned_cols=127 Identities=12% Similarity=0.158 Sum_probs=85.6
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-ccccCCCCCC----CCCCceeeecCCeEEEeecCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-FGLNMKPMCK----PSEVSYTIMPNMGYFEFLPHDPNSPP 378 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~~~----~~~~~~~l~~~~~ffEFip~~~~~~~ 378 (598)
++++++||. .....++++.+ +++++ +.||+||+. ++.. .+... ....+. ..++ .-++.++.+.
T Consensus 312 l~~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~-~~~~~~~~~~~~~G~-~~~g-~~v~i~~~~~---- 382 (538)
T TIGR03208 312 LFTFLCAGAPIPGILVERAWELL-GALIV-SAWGMTENGAVTVT-EPDDALEKASTTDGR-PLPG-VEVKVIDANG---- 382 (538)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHc-CCeEE-eeeccCcCCCcccc-CcccchhhccCcccc-cCCC-CEEEEECCCC----
Confidence 567777763 34456667777 78888 999999963 3221 11100 001111 1222 2334443221
Q ss_pred CCCCCCCccccccccCCCCeEEEEEccc---ccccc------------cccCCEEEEeeeeCCCCeEEEEeecCceeccc
Q 007558 379 LSPESPPRLVDLAHVQVGKQYELVVTTY---AGLNR------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSID 443 (598)
Q Consensus 379 ~~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~R------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 443 (598)
.++..|+.|||+|++. .|+|. |+|||+++++. ...+.|+||.+++++++
T Consensus 383 ------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~~~i~~~ 446 (538)
T TIGR03208 383 ------------AKLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDA----EGYIRINGRSKDVIIRG 446 (538)
T ss_pred ------------CCCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECC----CCcEEEEeccCceEEEC
Confidence 2346799999999753 56663 99999999973 56899999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDN 458 (598)
Q Consensus 444 GEki~e~~v~~av~~ 458 (598)
|+||.+.+||.++.+
T Consensus 447 G~~v~p~eIE~~l~~ 461 (538)
T TIGR03208 447 GENIPVVEIENLLYQ 461 (538)
T ss_pred CEEECHHHHHHHHhc
Confidence 999999999999965
No 35
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.28 E-value=1.2e-09 Score=122.59 Aligned_cols=132 Identities=16% Similarity=0.190 Sum_probs=82.7
Q ss_pred eEEEEeCc-hhhhHHHHHhhcCCCCeeccccccccccccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCCCCCC
Q 007558 307 LDVIVTGA-MAQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPP 385 (598)
Q Consensus 307 l~~~~~g~-~~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~ 385 (598)
++++.+|. ..+-..++.+.+ |++++ +.||+||+.+.+...+..++...+. ..++ +++++.+...
T Consensus 269 lr~~~gg~~~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~g~-~~~~---~~i~~~~~~~--------- 333 (529)
T PRK07867 269 LRIVYGNEGAPGDIARFARRF-GCVVV-DGFGSTEGGVAITRTPDTPPGALGP-LPPG---VAIVDPDTGT--------- 333 (529)
T ss_pred eEEEecCCCChHHHHHHHHHh-CCcEE-EeecccccccccccCCCCCCCCcCC-CCCC---EEEEECCCCC---------
Confidence 56555443 233345666777 78998 9999999754332111111111111 1122 5666533211
Q ss_pred ccccccc-------cCCCCeEEEEE-cc---ccccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceec
Q 007558 386 RLVDLAH-------VQVGKQYELVV-TT---YAGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLS 441 (598)
Q Consensus 386 ~~v~~~e-------ve~G~~yelvv-Tt---~~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 441 (598)
.+...+ ...|..|||++ .. +.|+| +|+|||+++++. ...+.|+||.+|+++
T Consensus 334 -~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~~~GR~~d~i~ 408 (529)
T PRK07867 334 -ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDA----DGYAYFAGRLGDWMR 408 (529)
T ss_pred -CCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeC----CCcEEEeccccCeEE
Confidence 111101 01122799998 43 46666 699999999873 568999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007558 442 IDSDKTDEAELQKGIDN 458 (598)
Q Consensus 442 ~~GEki~e~~v~~av~~ 458 (598)
++|+|+.+.+||+++.+
T Consensus 409 ~~G~~v~p~eIE~~l~~ 425 (529)
T PRK07867 409 VDGENLGTAPIERILLR 425 (529)
T ss_pred ECCEEeCHHHHHHHHHh
Confidence 99999999999999976
No 36
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.28 E-value=1.1e-09 Score=122.70 Aligned_cols=110 Identities=22% Similarity=0.329 Sum_probs=74.5
Q ss_pred CCCeeccccccccccccccCCCCCCC-----CCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEE
Q 007558 328 GLPLACTMYASSECFFGLNMKPMCKP-----SEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELV 402 (598)
Q Consensus 328 g~~v~~~~ygaSEg~~~i~~~~~~~~-----~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelv 402 (598)
|++++ +.||+||+...+........ ...+.++.+ ....+++++++. ..+..|+.|||+
T Consensus 319 ~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~i~d~~~~---------------~~~~~g~~Gel~ 381 (540)
T PRK06164 319 GVPLT-GLYGSSEVQALVALQPATDPVSVRIEGGGRPASP-EARVRARDPQDG---------------ALLPDGESGEIE 381 (540)
T ss_pred CCcee-cceeeccccceeeccCCCCCCcceeccCccccCC-CeEEEEecCCCC---------------cCCCCCCeeEEE
Confidence 68888 99999997433221111100 001121112 224555553322 134679999999
Q ss_pred Ecc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 403 VTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 403 vTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
|++ +.|||. |+|||+++++. ...+.|+||.++++++.|+++++.+||+++.+
T Consensus 382 v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~ 450 (540)
T PRK06164 382 IRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRG----DGQFVYQTRMGDSLRLGGFLVNPAEIEHALEA 450 (540)
T ss_pred EecccccccccCCchhhhhcccCCCceecCCeEEEcC----CceEEEEeecCCeEEECCEEcCHHHHHHHHHh
Confidence 986 345532 99999999984 56899999999999999999999999999965
No 37
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.27 E-value=8.1e-10 Score=122.08 Aligned_cols=130 Identities=12% Similarity=0.176 Sum_probs=81.9
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCCCCCcee------eecCCeEEEeecCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPSEVSYT------IMPNMGYFEFLPHDPNSP 377 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~------l~~~~~ffEFip~~~~~~ 377 (598)
++.+++||. ....+.+++.+++++++ +.||+||....+...+.++.....+. ..++.. ...++.+
T Consensus 262 l~~i~~~G~~l~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~i~d~~---- 335 (503)
T PRK04813 262 LTHFLFCGEELPHKTAKKLLERFPSATIY-NTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSP-LLIIDEE---- 335 (503)
T ss_pred ceEEEEecCcCCHHHHHHHHHHCCCceEE-eCcccchheeEEEEEEecccccccCCCCcccccCCCCE-EEEECCC----
Confidence 555555552 45667788888788888 99999996322111011110000010 111111 1111211
Q ss_pred CCCCCCCCccccccccCCCCeEEEEEccc---cccc-----------------ccccCCEEEEeeeeCCCCeEEEEeecC
Q 007558 378 PLSPESPPRLVDLAHVQVGKQYELVVTTY---AGLN-----------------RYRVGDILLVTGYYNSAPQFRFVKRKN 437 (598)
Q Consensus 378 ~~~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~-----------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 437 (598)
...+..|+.|||+|+.. .||| -|+|||++++ . ...+.|.||.+
T Consensus 336 ------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~----~g~~~~~GR~~ 398 (503)
T PRK04813 336 ------------GTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-E----DGLLFYQGRID 398 (503)
T ss_pred ------------CCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-e----CCeEEEecccc
Confidence 12456788999999752 2222 2999999998 3 56899999999
Q ss_pred ceecccccccCHHHHHHHHHHH
Q 007558 438 VLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 438 ~~l~~~GEki~e~~v~~av~~a 459 (598)
|++++.|+|+++.+||+++...
T Consensus 399 d~i~~~G~~v~~~~iE~~l~~~ 420 (503)
T PRK04813 399 FQIKLNGYRIELEEIEQNLRQS 420 (503)
T ss_pred ceEEECcEEeCHHHHHHHHHhC
Confidence 9999999999999999999763
No 38
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.27 E-value=2e-09 Score=120.84 Aligned_cols=129 Identities=16% Similarity=0.182 Sum_probs=89.7
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-ccccCCCCC---CCCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-FGLNMKPMC---KPSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
++++++||. ...++.+++.+++++++ +.||+||+. ++....... .....+. ..+ ....++++.+.
T Consensus 292 lr~i~~gg~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~d~~~----- 363 (542)
T PRK07786 292 LRVLSWGAAPASDTLLRQMAATFPEAQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGK-VIP-TVAARVVDENM----- 363 (542)
T ss_pred eEEEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccceEecCcccccccCCCccc-cCC-CceEEEECCCC-----
Confidence 678777773 45677888888889999 999999963 222111100 0001111 112 23455555321
Q ss_pred CCCCCCccccccccCCCCeEEEEEcc---cccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceeccc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSID 443 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 443 (598)
.++.+|+.|||++.. ..|||+ |+|||+++++. ...+.|+||.++++++.
T Consensus 364 -----------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~----~g~~~i~GR~~d~i~~~ 428 (542)
T PRK07786 364 -----------NDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDE----EGYVWVVDRKKDMIISG 428 (542)
T ss_pred -----------CCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcC----CceEEEEecccceEEeC
Confidence 134678899999964 466764 99999999974 56899999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDN 458 (598)
Q Consensus 444 GEki~e~~v~~av~~ 458 (598)
|+++++.+||.+|.+
T Consensus 429 G~~v~~~eiE~~l~~ 443 (542)
T PRK07786 429 GENIYCAEVENVLAS 443 (542)
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999965
No 39
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.27 E-value=9.6e-10 Score=122.41 Aligned_cols=43 Identities=26% Similarity=0.331 Sum_probs=40.1
Q ss_pred cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 412 YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 412 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
|+|||+++++. ...+.|+||.+|+|+++|++|++.|||++|.+
T Consensus 359 ~~TGDlg~~d~----dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 359 RRHGDIMKRTP----GGYFCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred eecCCeEEECC----CCcEEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 79999999983 67899999999999999999999999999975
No 40
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.27 E-value=1.5e-09 Score=120.96 Aligned_cols=128 Identities=15% Similarity=0.125 Sum_probs=86.1
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCC---CCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCK---PSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~---~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
++.+++||. ...++++.+.+ +++++ +.||+||........+... +...+. ..++ .-+++++.+.
T Consensus 294 lr~i~~gG~~l~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~~------ 363 (516)
T PRK13383 294 LRVVMSSGDRLDPTLGQRFMDTY-GDILY-NGYGSTEVGIGALATPADLRDAPETVGK-PVAG-CPVRILDRNN------ 363 (516)
T ss_pred eEEEEECCCCCCHHHHHHHHHHc-Cchhh-hcccccccccceeccccccccCCCcccC-CCCC-cEEEEECCCC------
Confidence 777887774 45567777888 68888 9999999743221111100 001111 1111 1244444221
Q ss_pred CCCCCccccccccCCCCeEEEEEccc---cccc----------ccccCCEEEEeeeeCCCCeEEEEeecCceeccccccc
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTTY---AGLN----------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKT 447 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt~---~GL~----------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki 447 (598)
.++.+|+.|||++++. .||+ .|+|||+++++. ...+.|+||.++++++.|+++
T Consensus 364 ----------~~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~----~G~l~i~GR~~~~i~~~G~~v 429 (516)
T PRK13383 364 ----------RPVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDN----AGRLFIVGREDDMIISGGENV 429 (516)
T ss_pred ----------CCCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcC----CccEEEeccccceEEECCEEE
Confidence 2346788999999753 4555 467999999984 568999999999999999999
Q ss_pred CHHHHHHHHHH
Q 007558 448 DEAELQKGIDN 458 (598)
Q Consensus 448 ~e~~v~~av~~ 458 (598)
++.+||.+|.+
T Consensus 430 ~~~eiE~~l~~ 440 (516)
T PRK13383 430 YPRAVENALAA 440 (516)
T ss_pred CHHHHHHHHHh
Confidence 99999999965
No 41
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.27 E-value=1.7e-09 Score=121.09 Aligned_cols=154 Identities=14% Similarity=0.156 Sum_probs=98.8
Q ss_pred CCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCC--
Q 007558 276 PNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPM-- 350 (598)
Q Consensus 276 ~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~-- 350 (598)
..|..+..|.+..... ....-++. ++.+.+||. ...++.+++.+ +++++ +.||+||+...+...+.
T Consensus 273 ~~P~~~~~l~~~~~~~----~~~~~~~~---lr~i~~~G~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~ 343 (534)
T PRK05852 273 AVPTIHQILLERAATE----PSGRKPAA---LRFIRSCSAPLTAETAQALQTEF-AAPVV-CAFGMTEATHQVTTTQIEG 343 (534)
T ss_pred cChHHHHHHHhhcccc----cccccCCC---eeEEEECCCCCCHHHHHHHHHHh-CCChh-hccCccccchhhhcCCccc
Confidence 3677777765543221 01122455 777777763 34567777888 78888 89999996322211110
Q ss_pred --CC--C-CCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEccc---ccccc-----------
Q 007558 351 --CK--P-SEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTTY---AGLNR----------- 411 (598)
Q Consensus 351 --~~--~-~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~R----------- 411 (598)
+. + ...+.+-.......+.++.+. .++.+|+.+||+|+.. .|+|+
T Consensus 344 ~~~~~~~~~~~g~~g~~~g~~~~i~d~~g----------------~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~ 407 (534)
T PRK05852 344 IGQTENPVVSTGLVGRSTGAQIRIVGSDG----------------LPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTD 407 (534)
T ss_pred cccccCcccccccCCCCCCCeEEEECCCC----------------CCCCCCCceEEEEecCcccchhcCCcccchhhhcC
Confidence 00 0 011111001223344454321 2456799999999753 56665
Q ss_pred --cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 412 --YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 412 --Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
|+|||+++++. ...+.|.||.+|+++++|+++.+.+||+++.+
T Consensus 408 g~~~TGD~~~~d~----dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~ 452 (534)
T PRK05852 408 GWLRTGDLGSLSA----AGDLSIRGRIKELINRGGEKISPERVEGVLAS 452 (534)
T ss_pred CCcccCceEEEeC----CCcEEEEecchhhEEECCEEECHHHHHHHHHh
Confidence 89999999983 56899999999999999999999999999965
No 42
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.27 E-value=1.8e-10 Score=127.21 Aligned_cols=127 Identities=20% Similarity=0.244 Sum_probs=83.9
Q ss_pred eEEEEeCchh---hhHHHHHhhcCCCCeeccccccccccc--cccCCCC---CCCCCCceeeecCCeEEEeecCCCCCCC
Q 007558 307 LDVIVTGAMA---QYIPTLDHYSGGLPLACTMYASSECFF--GLNMKPM---CKPSEVSYTIMPNMGYFEFLPHDPNSPP 378 (598)
Q Consensus 307 l~~~~~g~~~---~y~~~l~~~~~g~~v~~~~ygaSEg~~--~i~~~~~---~~~~~~~~~l~~~~~ffEFip~~~~~~~ 378 (598)
++.+++||.. .....+.+ . |++++ +.||+||+.. +++..+. ..+...+. .. ....+++++.+.
T Consensus 254 l~~~~~gG~~~~~~~~~~~~~-~-g~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~-~~-~~~~~~i~d~~~---- 324 (488)
T PRK09088 254 LTALFTGGAPHAAEDILGWLD-D-GIPMV-DGFGMSEAGTVFGMSVDCDVIRAKAGAAGI-PT-PTVQTRVVDDQG---- 324 (488)
T ss_pred ceEEEecCCCCCHHHHHHHHH-h-CCcee-eeecccccccccccCCCcccccccCCcccc-CC-CCcEEEEECCCC----
Confidence 7888888852 22233332 2 68998 8999999732 2221111 01111111 11 223455554321
Q ss_pred CCCCCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceec
Q 007558 379 LSPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLS 441 (598)
Q Consensus 379 ~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 441 (598)
.++..|+.|||+|++ ..|||+ |+|||+++++. ...+.|.||.+|+++
T Consensus 325 ------------~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~ 388 (488)
T PRK09088 325 ------------NDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDA----DGFFWVVDRKKDMFI 388 (488)
T ss_pred ------------CCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcC----CCcEEEeccccceEE
Confidence 134678899999976 356664 99999999984 568999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007558 442 IDSDKTDEAELQKGIDN 458 (598)
Q Consensus 442 ~~GEki~e~~v~~av~~ 458 (598)
..|+|+++.+||++|.+
T Consensus 389 ~~G~~i~~~~iE~~l~~ 405 (488)
T PRK09088 389 SGGENVYPAEIEAVLAD 405 (488)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 99999999999999965
No 43
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.27 E-value=1.9e-10 Score=128.94 Aligned_cols=130 Identities=18% Similarity=0.181 Sum_probs=86.3
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCC-CC-CCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPM-CK-PSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~-~~-~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++++++||. ....+++.+.+ +++++ +.||+||+.......+. .+ ....+. ..++. -...++.+.
T Consensus 307 l~~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~g~-~~~i~d~~~------- 375 (546)
T PRK08314 307 LRYIGGGGAAMPEAVAERLKELT-GLDYV-EGYGLTETMAQTHSNPPDRPKLQCLGI-PTFGV-DARVIDPET------- 375 (546)
T ss_pred hheeeeccccCCHHHHHHHHHHc-CCcEE-ecccccccccceecCCCcCCCCCccCc-ccCCe-EEEEEeCCC-------
Confidence 677777773 34556777777 78888 99999997432211111 00 001111 11222 122233221
Q ss_pred CCCCccccccccCCCCeEEEEEcc---ccccc-----------------ccccCCEEEEeeeeCCCCeEEEEeecCceec
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLN-----------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLS 441 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~-----------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 441 (598)
..+|+.|+.|||+|.. ..|+| -|+|||+++++. ...+.++||.+|+++
T Consensus 376 --------~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~d~i~ 443 (546)
T PRK08314 376 --------LEELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDE----EGYFFITDRLKRMIN 443 (546)
T ss_pred --------CcCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcC----CCcEEEEecchhhEE
Confidence 1245679999999964 35555 399999999984 578999999999999
Q ss_pred ccccccCHHHHHHHHHHH
Q 007558 442 IDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 442 ~~GEki~e~~v~~av~~a 459 (598)
+.|++|++.+||.+|.+.
T Consensus 444 ~~G~~v~~~eIE~~i~~~ 461 (546)
T PRK08314 444 ASGFKVWPAEVENLLYKH 461 (546)
T ss_pred eCCEEECHHHHHHHHHhC
Confidence 999999999999999763
No 44
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.26 E-value=2.9e-10 Score=127.59 Aligned_cols=128 Identities=13% Similarity=0.165 Sum_probs=86.3
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCC----CCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCK----PSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~----~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
++++.+||. ....+++.+.+ |++++ +.||+||+.+.... ...+ ....+..+.|+. ..+.++.+
T Consensus 302 l~~v~~gg~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~-~~~~~~~~~~~~G~p~~~~~-~v~i~d~~------ 371 (536)
T PRK10946 302 LKLLQVGGARLSETLARRIPAEL-GCQLQ-QVFGMAEGLVNYTR-LDDSDERIFTTQGRPMSPDD-EVWVADAD------ 371 (536)
T ss_pred eeEEEECCCCCCHHHHHHHHHhc-CCeEE-Eeecccccceeeec-CCCccccccccCCcccCCCc-eEEEECCC------
Confidence 678888874 34556666777 79998 99999997544321 1100 000111111111 12222211
Q ss_pred CCCCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI 442 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 442 (598)
..++..|+.+||+|+. ..|||. |+|||+++.+. ...+.|.||.+|++++
T Consensus 372 ----------~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~----~G~l~~~gR~~d~i~~ 437 (536)
T PRK10946 372 ----------GNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDP----DGYITVVGREKDQINR 437 (536)
T ss_pred ----------CCCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECC----CCcEEEeccccceeec
Confidence 1245689999999964 466663 99999999984 5679999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007558 443 DSDKTDEAELQKGIDN 458 (598)
Q Consensus 443 ~GEki~e~~v~~av~~ 458 (598)
+|+++++.+||.+|.+
T Consensus 438 ~G~~v~~~eiE~~l~~ 453 (536)
T PRK10946 438 GGEKIAAEEIENLLLR 453 (536)
T ss_pred CCEEEcHHHHHHHHHh
Confidence 9999999999999975
No 45
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.26 E-value=1.4e-09 Score=120.41 Aligned_cols=129 Identities=13% Similarity=0.205 Sum_probs=83.0
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCC-CCCC------CCCceeeecCCeEEEeecCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKP-MCKP------SEVSYTIMPNMGYFEFLPHDPNS 376 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~-~~~~------~~~~~~l~~~~~ffEFip~~~~~ 376 (598)
++.++.||. ....+.+.+.+++++++ ..||+||....+.... .++. ...+.. .++.. ...++.+
T Consensus 260 l~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~-~~~~~-~~i~~~~--- 333 (502)
T TIGR01734 260 LTHFLFCGEELPVKTAKALLERFPKATIY-NTYGPTEATVAVTSVKITQEILDQYPRLPIGFA-KPDMN-LFIMDEE--- 333 (502)
T ss_pred ccEEEEcCCcCCHHHHHHHHHHCCCcEEE-eCccCCcceEEEEEEEccccccccCCccccccc-cCCCE-EEEECCC---
Confidence 455555552 35567777778789988 9999999643221100 0000 000100 11111 1111111
Q ss_pred CCCCCCCCCccccccccCCCCeEEEEEcc---ccccc-----------------ccccCCEEEEeeeeCCCCeEEEEeec
Q 007558 377 PPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLN-----------------RYRVGDILLVTGYYNSAPQFRFVKRK 436 (598)
Q Consensus 377 ~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~-----------------RYr~GDvV~v~gf~~~~P~i~f~gR~ 436 (598)
...+.+|+.|||++++ ..|+| -|+|||+++++. . .+.|+||.
T Consensus 334 -------------~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~----~-~l~i~GR~ 395 (502)
T TIGR01734 334 -------------GEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITD----G-QLFYQGRL 395 (502)
T ss_pred -------------CCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEEC----C-EEEEeccc
Confidence 1235679999999965 34554 289999999984 3 99999999
Q ss_pred CceecccccccCHHHHHHHHHHH
Q 007558 437 NVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 437 ~~~l~~~GEki~e~~v~~av~~a 459 (598)
+|+++++|+||++.+||+++.+.
T Consensus 396 ~d~i~~~G~~v~~~~IE~~l~~~ 418 (502)
T TIGR01734 396 DFQIKLHGYRIELEDIEFNLRQS 418 (502)
T ss_pred cCeEEECcEEeCHHHHHHHHHcC
Confidence 99999999999999999999763
No 46
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.26 E-value=2.4e-10 Score=126.50 Aligned_cols=130 Identities=12% Similarity=0.135 Sum_probs=89.0
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCC---CC-CCCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKP---MC-KPSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~---~~-~~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
++++++||. ...++.+++.+++++++ +.||+||+........ .+ .+...+. ..++. -.+.++.+.
T Consensus 266 l~~~~~gG~~~~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~~~~~----- 337 (497)
T PRK06145 266 LAWCIGGGEKTPESRIRDFTRVFTRARYI-DAYGLTETCSGDTLMEAGREIEKIGSTGR-ALAHV-EIRIADGAG----- 337 (497)
T ss_pred ceEEEecCCCCCHHHHHHHHHHcCCCceE-EeecCcccCCcceeccCccccccCCCccc-CCCCc-eEEEECCCC-----
Confidence 677777773 45567788888788898 9999999753221110 00 1111121 11222 233333211
Q ss_pred CCCCCCccccccccCCCCeEEEEEcc---cccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceeccc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSID 443 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 443 (598)
..+.+|+.+||++++ ..|||. |+|||+++.+. ...+.|+||.++++++.
T Consensus 338 -----------~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~ 402 (497)
T PRK06145 338 -----------RWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDE----EGFLYLTDRKKDMIISG 402 (497)
T ss_pred -----------CCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcC----CCcEEEeccccceEEeC
Confidence 134568899999975 467774 99999999984 56899999999999999
Q ss_pred ccccCHHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDNA 459 (598)
Q Consensus 444 GEki~e~~v~~av~~a 459 (598)
|+++.+.+||.++.+.
T Consensus 403 G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 403 GENIASSEVERVIYEL 418 (497)
T ss_pred CeEECHHHHHHHHHhC
Confidence 9999999999999763
No 47
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.25 E-value=2.5e-10 Score=128.44 Aligned_cols=154 Identities=16% Similarity=0.179 Sum_probs=99.4
Q ss_pred CCCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccc-cccCCCC
Q 007558 275 KPNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFF-GLNMKPM 350 (598)
Q Consensus 275 ~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~ 350 (598)
...|..+.+|....... ..+.++ .++++++||+ ....+++++.++..+++ ..||+||+.. .+...+.
T Consensus 269 ~~vPt~~~~ll~~~~~~-----~~~~~~---~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~ 339 (534)
T COG0318 269 SGVPTFLRELLDNPEKD-----DDDLSS---SLRLVLSGGAPLPPELLERFEERFGPIAIL-EGYGLTETSPVVTINPPD 339 (534)
T ss_pred ecchHHHHHHHhCCccC-----cccccc---ceEEEEecCCcCCHHHHHHHHHHhCCCceE-EeecccccCceeecCCCc
Confidence 34677777755543321 122222 2889998985 46778888888556788 9999999853 3222111
Q ss_pred C---CCCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEc---ccccccc-------------
Q 007558 351 C---KPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVT---TYAGLNR------------- 411 (598)
Q Consensus 351 ~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvT---t~~GL~R------------- 411 (598)
. .....+. ..|+ .-...++.++. ++.+|+.|||+|. -..|+|+
T Consensus 340 ~~~~~~~~~G~-~~pg-~~v~Ivd~~~~----------------~~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~g 401 (534)
T COG0318 340 DLLAKPGSVGR-PLPG-VEVRIVDPDGG----------------EVLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDG 401 (534)
T ss_pred hhhhcCCcccc-cCCC-cEEEEEeCCCC----------------ccCCCCceEEEEECchhhhhhcCChHHHHHhhccCC
Confidence 1 0111111 1121 11222222211 1233888999994 3467774
Q ss_pred -cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHH
Q 007558 412 -YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 412 -Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a 459 (598)
|+|||+.+++. .+.+.|+||.+|+|+.+||+|++.+||.++.+.
T Consensus 402 W~~TGDlg~~d~----~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~ 446 (534)
T COG0318 402 WLRTGDLGYVDE----DGYLYIVGRLKDLIISGGENIYPEEIEAVLAEH 446 (534)
T ss_pred eeeecceEEEcC----CccEEEEeccceEEEeCCeEECHHHHHHHHHhC
Confidence 89999998884 588999999999999999999999999999774
No 48
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.25 E-value=3e-09 Score=120.05 Aligned_cols=128 Identities=16% Similarity=0.255 Sum_probs=86.1
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-ccccCCCC--CCCCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-FGLNMKPM--CKPSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~--~~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
++.+.+||. ......+++.+ +++++ +.||+||+. ++...... ..+...+. ..++. =+++++++.
T Consensus 335 lr~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~~~-~v~ivd~~~------ 404 (562)
T PRK12492 335 LKLTNSGGTALVKATAERWEQLT-GCTIV-EGYGLTETSPVASTNPYGELARLGTVGI-PVPGT-ALKVIDDDG------ 404 (562)
T ss_pred eeEEEeccccCCHHHHHHHHHHh-CCcee-eccCccccCceeeecCCcccccCCccce-ecCCC-EEEEECCCC------
Confidence 677777773 34556677767 79998 999999963 22211000 00111222 12222 234444221
Q ss_pred CCCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceeccc
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSID 443 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 443 (598)
..+.+|+.|||+|++ ..|||. |+|||+++++. ...+.|+||.++++++.
T Consensus 405 ----------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~----~G~l~i~GR~~~~i~~~ 470 (562)
T PRK12492 405 ----------NELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP----DGFVRIVDRKKDLIIVS 470 (562)
T ss_pred ----------CCCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC----CCeEEEecccCCeEEEC
Confidence 134679999999975 355652 99999999984 56899999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDN 458 (598)
Q Consensus 444 GEki~e~~v~~av~~ 458 (598)
|+++++.+||.++.+
T Consensus 471 G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 471 GFNVYPNEIEDVVMA 485 (562)
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999965
No 49
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.25 E-value=2.5e-10 Score=122.57 Aligned_cols=148 Identities=18% Similarity=0.262 Sum_probs=96.0
Q ss_pred CCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeecccccccccccccc---CCC
Q 007558 276 PNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLN---MKP 349 (598)
Q Consensus 276 ~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~---~~~ 349 (598)
..|.....|.+... ...++ ++.+..||. ....+.+++.+++++++ ..||+||+...+. ...
T Consensus 217 ~~p~~~~~l~~~~~---------~~~~~---l~~v~~~g~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~g~~~~~~~~~~ 283 (408)
T TIGR01733 217 LTPSLLALLAAALP---------PALAS---LRLVILGGEALTPALVDRWRARGPGARLI-NLYGPTETTVWSTATLVDA 283 (408)
T ss_pred eCHHHHHHHHHhhh---------hcccC---ceEEEEeCccCCHHHHHHHHHhCCCcEEE-ecccCCceEEEEEEEEcCc
Confidence 46777777655432 12334 666676663 45677888888668888 9999999733221 111
Q ss_pred CCCCC----CCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEcc---ccccc------------
Q 007558 350 MCKPS----EVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLN------------ 410 (598)
Q Consensus 350 ~~~~~----~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~------------ 410 (598)
..... ..+ +..++. ....++++ ...+..|+.|||+|+. ..|+|
T Consensus 284 ~~~~~~~~~~~G-~~~~~~-~~~i~~~~----------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 345 (408)
T TIGR01733 284 DDAPRESPVPIG-RPLANT-RLYVLDDD----------------LRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVP 345 (408)
T ss_pred cccCCccccccC-cccCCc-eEEEECCC----------------CCCCCCCCceEEEecCccccccccCChhhhhcceee
Confidence 11000 011 111221 22223322 1234679999999985 34555
Q ss_pred ----------ccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 411 ----------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 411 ----------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
.|+|||+++++. ..++.|+||.+|++++.|+++++.+||+++..
T Consensus 346 ~~~~~~~~~~~~~TGDl~~~d~----~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~ 399 (408)
T TIGR01733 346 DPFAGGDGARLYRTGDLVRYLP----DGNLEFLGRIDDQVKIRGYRIELGEIEAALLR 399 (408)
T ss_pred CCCCCCCCceEEECCceEEEcC----CCCEEEeeccCCEEEeCeEEechHHHHHHHhc
Confidence 499999999984 46799999999999999999999999999975
No 50
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.25 E-value=1.6e-09 Score=120.92 Aligned_cols=149 Identities=11% Similarity=0.120 Sum_probs=93.0
Q ss_pred CHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCC---
Q 007558 277 NPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPM--- 350 (598)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~--- 350 (598)
.|...+.|.+..... ....++ ++.+++||. .....++.+.+ |.++. +.||+||+...+...+.
T Consensus 261 ~P~~~~~l~~~~~~~------~~~~~~---lr~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~ 329 (528)
T PRK07470 261 VPTILKMLVEHPAVD------RYDHSS---LRYVIYAGAPMYRADQKRALAKL-GKVLV-QYFGLGEVTGNITVLPPALH 329 (528)
T ss_pred hHHHHHHHHhCcCcC------CCCCcc---eEEEEEcCCCCCHHHHHHHHHHh-CcHHH-HhCCCcccCCceeecchhhc
Confidence 566666655432211 112345 677777763 34455666667 67777 99999996322211100
Q ss_pred -CC------CCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEcc---cccccc---------
Q 007558 351 -CK------PSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------- 411 (598)
Q Consensus 351 -~~------~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------- 411 (598)
.+ ....+. ..++ .-++.++.+ ..++..|+.|||+|++ ..|||.
T Consensus 330 ~~~~~~~~~~~~~G~-~~~g-~~~~i~d~~----------------~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~ 391 (528)
T PRK07470 330 DAEDGPDARIGTCGF-ERTG-MEVQIQDDE----------------GRELPPGETGEICVIGPAVFAGYYNNPEANAKAF 391 (528)
T ss_pred cccccccceeeccCc-ccCC-cEEEEECCC----------------CCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh
Confidence 00 000011 1111 123333321 1245679999999965 356664
Q ss_pred ----cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 412 ----YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 412 ----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
|+|||+++++. ...+.+.||.++++++.|+++.+.+||.+|..
T Consensus 392 ~~~~~~TGDl~~~~~----~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~ 438 (528)
T PRK07470 392 RDGWFRTGDLGHLDA----RGFLYITGRASDMYISGGSNVYPREIEEKLLT 438 (528)
T ss_pred cCCcEecceeEEEcc----CCeEEEeCCccceEEeCCEEECHHHHHHHHHh
Confidence 99999999874 66899999999999999999999999999975
No 51
>PLN02246 4-coumarate--CoA ligase
Probab=99.25 E-value=1.7e-09 Score=121.30 Aligned_cols=130 Identities=16% Similarity=0.160 Sum_probs=86.6
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCC-------CCCCCceeeecCCeEEEeecCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMC-------KPSEVSYTIMPNMGYFEFLPHDPNS 376 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~-------~~~~~~~~l~~~~~ffEFip~~~~~ 376 (598)
++.+++||. ....+.+++.++++++. +.||+||+...+...... .+...+.. .++ .-.+.++++.
T Consensus 300 lr~~~~gg~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~~-- 374 (537)
T PLN02246 300 IRMVLSGAAPLGKELEDAFRAKLPNAVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTV-VRN-AELKIVDPET-- 374 (537)
T ss_pred eeEEEEecCcCCHHHHHHHHHHcCCCeEe-ccccccccCcccccccccCCCCccccCCccccc-cCC-cEEEEecCCC--
Confidence 777777774 35567778888788888 899999974321110000 00011111 111 1233333221
Q ss_pred CCCCCCCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCce
Q 007558 377 PPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVL 439 (598)
Q Consensus 377 ~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~ 439 (598)
..++..|+.|||+|+. ..|+|. |+|||+++++. ...+.|.||.+++
T Consensus 375 -------------~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~dd~ 437 (537)
T PLN02246 375 -------------GASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDD----DDELFIVDRLKEL 437 (537)
T ss_pred -------------CCcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeC----CCeEEEEecccce
Confidence 1245779999999974 355542 78999999984 5689999999999
Q ss_pred ecccccccCHHHHHHHHHH
Q 007558 440 LSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 440 l~~~GEki~e~~v~~av~~ 458 (598)
+++.|++|++.+||+++.+
T Consensus 438 i~~~G~~i~~~eIE~~l~~ 456 (537)
T PLN02246 438 IKYKGFQVAPAELEALLIS 456 (537)
T ss_pred EEECCEEECcHHHHHHHHh
Confidence 9999999999999999975
No 52
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.24 E-value=2.3e-09 Score=119.19 Aligned_cols=131 Identities=16% Similarity=0.157 Sum_probs=91.1
Q ss_pred CCceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCC--CCCCCceeeecCCeEEEeecCCCCCC
Q 007558 303 NTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMC--KPSEVSYTIMPNMGYFEFLPHDPNSP 377 (598)
Q Consensus 303 ~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~~ 377 (598)
.|+.|+.+.+.|- .+-...+.+.+ |+++. +.||.||...++ +.+.. .+... ....|.. -.+.++.+ .
T Consensus 288 dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~-d~~gqTEtg~~~-~~~~~~~~~g~~-g~p~pG~-~~~vvdd~-g-- 359 (528)
T COG0365 288 DLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWIL-DIYGQTETGMGF-IAGRPPVKNGSS-GLPLPGY-AVRRVDDE-G-- 359 (528)
T ss_pred cchhheeeeccCCCCCHHHHHHHHHHh-CCCEe-ccccccccCccc-cCCCCCcCCCCC-CCCCCCc-eeEEECCC-C--
Confidence 3445788877773 34557777888 69999 999999965211 11111 11111 2122322 24444433 1
Q ss_pred CCCCCCCCccccccccCCCCeEEEEEccc-----ccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCce
Q 007558 378 PLSPESPPRLVDLAHVQVGKQYELVVTTY-----AGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVL 439 (598)
Q Consensus 378 ~~~~~~~~~~v~~~eve~G~~yelvvTt~-----~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~ 439 (598)
.++.+|+ |+|+|... .|+|+ |.|||...++. ...+.|+||.+|+
T Consensus 360 -------------~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~De----dGy~~i~GR~DDv 421 (528)
T COG0365 360 -------------NPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDE----DGYFWLHGRSDDV 421 (528)
T ss_pred -------------CcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEcc----CCCEEEEeeccce
Confidence 1446688 99999743 46777 99999999994 6999999999999
Q ss_pred ecccccccCHHHHHHHHHHH
Q 007558 440 LSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 440 l~~~GEki~e~~v~~av~~a 459 (598)
||+.|..|...|||++|.+.
T Consensus 422 I~vsG~Rig~~EvE~~l~~h 441 (528)
T COG0365 422 IKVSGKRIGPLEIESVLLAH 441 (528)
T ss_pred EeccCeeccHHHHHHHHHhC
Confidence 99999999999999999763
No 53
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.24 E-value=2.5e-10 Score=128.93 Aligned_cols=143 Identities=13% Similarity=0.167 Sum_probs=85.2
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPES 383 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~ 383 (598)
++.+++||. ....+.+++.+++++++ +.||+||+...+......++.... .......|..............
T Consensus 290 lr~~~~gG~~l~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 364 (563)
T PLN02860 290 VRKILNGGGSLSSRLLPDAKKLFPNAKLF-SAYGMTEACSSLTFMTLHDPTLES----PKQTLQTVNQTKSSSVHQPQGV 364 (563)
T ss_pred eeEEEeCCCcCCHHHHHHHHHhcCCCcee-cCCCccccCccccccccccccccc----chhhhhhhcccccccccccCCc
Confidence 788888874 45567777888889999 999999964322111110000000 0000000100000000000000
Q ss_pred C-Ccc-----ccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCcee
Q 007558 384 P-PRL-----VDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLL 440 (598)
Q Consensus 384 ~-~~~-----v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l 440 (598)
. -.+ +.+...++|+.|||+|.. ..|||. |+|||+++++. ...+.|+||.+|++
T Consensus 365 ~vG~p~~~~~v~i~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d~i 440 (563)
T PLN02860 365 CVGKPAPHVELKIGLDESSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDK----AGNLWLIGRSNDRI 440 (563)
T ss_pred ccCCccCCcEEEEecCCCCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcC----CCCEEEeeccccee
Confidence 0 001 111111268999999965 356763 89999999973 67899999999999
Q ss_pred cccccccCHHHHHHHHHH
Q 007558 441 SIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 441 ~~~GEki~e~~v~~av~~ 458 (598)
+++|++|++.+||+++.+
T Consensus 441 ~~~G~~v~p~eIE~~l~~ 458 (563)
T PLN02860 441 KTGGENVYPEEVEAVLSQ 458 (563)
T ss_pred EECCEEccHHHHHHHHHh
Confidence 999999999999999976
No 54
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.24 E-value=3e-09 Score=119.47 Aligned_cols=128 Identities=14% Similarity=0.152 Sum_probs=86.5
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCC---CCCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMC---KPSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
++.+++||. ...+..+++.+ +++++ +.||+||+.......+.. .+...+. ..++ .-++.++.+.
T Consensus 314 lr~i~~gG~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~~-~~~~i~d~~~------ 383 (537)
T PRK13382 314 LRFAAASGSRMRPDVVIAFMDQF-GDVIY-NNYNATEAGMIATATPADLRAAPDTAGR-PAEG-TEIRILDQDF------ 383 (537)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHc-CCcEE-ecccccccCcceecChhHhccCCCCccc-cCcC-cEEEEECCCC------
Confidence 677777773 45667778888 67788 999999974322111100 0011111 1122 2344454321
Q ss_pred CCCCCccccccccCCCCeEEEEEccc---cccc----------ccccCCEEEEeeeeCCCCeEEEEeecCceeccccccc
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTTY---AGLN----------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKT 447 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt~---~GL~----------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki 447 (598)
.++..|+.+||+|++. .||+ .|+|||+++++. ...+.|+||.+|++++.|++|
T Consensus 384 ----------~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~ik~~G~~v 449 (537)
T PRK13382 384 ----------REVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDE----NGRLFVVGRDDEMIVSGGENV 449 (537)
T ss_pred ----------CCCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEeC----CCcEEEeccccceeEECCEEE
Confidence 2456799999999763 3432 489999999984 568999999999999999999
Q ss_pred CHHHHHHHHHH
Q 007558 448 DEAELQKGIDN 458 (598)
Q Consensus 448 ~e~~v~~av~~ 458 (598)
++.+||.+|.+
T Consensus 450 ~~~eIE~~l~~ 460 (537)
T PRK13382 450 YPIEVEKTLAT 460 (537)
T ss_pred CHHHHHHHHHh
Confidence 99999999965
No 55
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.24 E-value=4.5e-09 Score=121.11 Aligned_cols=159 Identities=19% Similarity=0.204 Sum_probs=92.4
Q ss_pred CCCeEEEEEccc-----cccc------c------------cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHH
Q 007558 395 VGKQYELVVTTY-----AGLN------R------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAE 451 (598)
Q Consensus 395 ~G~~yelvvTt~-----~GL~------R------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~ 451 (598)
+|+.|||+++.. .||| + |++||+++++. ...+.|+||.+|+|+++|++|.+.|
T Consensus 461 ~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~----dG~l~i~GR~dd~I~~~G~ri~p~E 536 (652)
T TIGR01217 461 TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP----RGGIVIHGRSDSTLNPQGVRMGSAE 536 (652)
T ss_pred CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC----CCcEEEEecccCeEecCCEEcCHHH
Confidence 488999999752 3454 1 78999999984 6789999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCeEEeEEEee-cCCCCCceEEEEEEEeecccCCCCChHHHHHHHHHHHHHhChhhHhccccCCc
Q 007558 452 LQKGIDNASLLLKEFNASVIEYTSYA-DTTTIPGHYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNS 530 (598)
Q Consensus 452 v~~av~~a~~~l~~~g~~l~~f~~~~-d~~~~p~~Y~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~ 530 (598)
||.+|.+.. + |.+-+|+. +.......-+.|+.+.. +. ..+.+..+++.+.+.+.|.. |
T Consensus 537 IE~~l~~~p------~--V~eaavvg~~~~~~ge~~~afVv~~~-~~--~~~~~~~~~l~~~~~~~l~~-~--------- 595 (652)
T TIGR01217 537 IYNAVERLD------E--VRESLCIGQEQPDGGYRVVLFVHLAP-GA--TLDDALLDRIKRTIRAGLSP-R--------- 595 (652)
T ss_pred HHHHHHhCC------C--cceEEEEeeecCCCCEEEEEEEEECC-CC--CCCHHHHHHHHHHHHhhCCC-C---------
Confidence 999997632 2 23433322 11111223346666642 21 22333333344444444411 1
Q ss_pred cCCeEEEEeC---CChHHHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhc
Q 007558 531 IGPLEIRVVK---NGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNG 578 (598)
Q Consensus 531 l~p~~v~~v~---~gtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~ 578 (598)
..|-.|.+|+ ...=.+.++..+.+=.....++.+--+.|++.++.+.+
T Consensus 596 ~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~~~~~~~~~~~~~~l~~~~~ 646 (652)
T TIGR01217 596 HVPDEIIEVPGIPHTLTGKRVEVAVKRVLQGTPVDNPGAIDNPELLDLYEE 646 (652)
T ss_pred cCCCEEEECCCCCCCCCccChHHHHHHHHcCCCCCCcccccCHHHHHHHHH
Confidence 2334455543 11112222222221122334667777889999988854
No 56
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.23 E-value=2.6e-09 Score=119.96 Aligned_cols=129 Identities=15% Similarity=0.098 Sum_probs=86.2
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCC-----CCCCceeeecCCeEEEeecCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCK-----PSEVSYTIMPNMGYFEFLPHDPNSPP 378 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~-----~~~~~~~l~~~~~ffEFip~~~~~~~ 378 (598)
|+.+++||. ....+.+.+.+++.++. ..||+||+.........+. +...+. ..++ ..++.++++.
T Consensus 319 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~~-~~~~i~d~~~---- 391 (558)
T PRK12583 319 LRTGIMAGAPCPIEVMRRVMDEMHMAEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGR-TQPH-LEVKVVDPDG---- 391 (558)
T ss_pred heEEEecCCCCCHHHHHHHHHHcCCccee-ccccccccccceeccCcccccccccCCCCc-cCCC-CeEEEECCCC----
Confidence 677776763 34556777777566777 9999999743211111110 001111 1222 2455554331
Q ss_pred CCCCCCCccccccccCCCCeEEEEEccc---cccc--------------ccccCCEEEEeeeeCCCCeEEEEeecCceec
Q 007558 379 LSPESPPRLVDLAHVQVGKQYELVVTTY---AGLN--------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLS 441 (598)
Q Consensus 379 ~~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 441 (598)
.+++.|+.|||+|++. .||| .|+|||+++++. ...+.|.||.+++++
T Consensus 392 ------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----dg~l~i~GR~~~~i~ 455 (558)
T PRK12583 392 ------------ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDE----QGYVRIVGRSKDMII 455 (558)
T ss_pred ------------CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECC----CccEEEEecccceeE
Confidence 2456799999999653 4554 289999999874 568999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007558 442 IDSDKTDEAELQKGIDN 458 (598)
Q Consensus 442 ~~GEki~e~~v~~av~~ 458 (598)
+.|++|++.+||+++.+
T Consensus 456 ~~G~~v~~~~IE~~l~~ 472 (558)
T PRK12583 456 RGGENIYPREIEEFLFT 472 (558)
T ss_pred ECCEEeCHHHHHHHHHh
Confidence 99999999999999965
No 57
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.23 E-value=4.5e-10 Score=124.69 Aligned_cols=129 Identities=18% Similarity=0.220 Sum_probs=85.4
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-ccccCCCC---CCCCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-FGLNMKPM---CKPSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~---~~~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
++.+.+||. ....+.+++.+++++++ +.||+||+. ++....+. ......+. ..++ .-+..++.+
T Consensus 288 l~~~~~gg~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~~~~------ 358 (523)
T PRK08316 288 LRKGYYGASIMPVEVLKELRERLPGLRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGR-PVLN-VETRVVDDD------ 358 (523)
T ss_pred ceEEEEcCCcCCHHHHHHHHHHcCCCcee-eeecccccCccccccCccccccccCCccc-CCCC-cEEEEEcCC------
Confidence 666666663 35567788888789999 999999963 33211110 00000111 1111 112222211
Q ss_pred CCCCCCccccccccCCCCeEEEEEccc---ccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceeccc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTTY---AGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSID 443 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 443 (598)
..++..|+.|||++++. .|+|. |+|||+++++. ...+.|+||.++++++.
T Consensus 359 ----------~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~i~gR~~~~i~~~ 424 (523)
T PRK08316 359 ----------GNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDE----EGYITVVDRKKDMIKTG 424 (523)
T ss_pred ----------CCCCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcC----CceEEEecccccEEEeC
Confidence 12345688999999763 55553 99999999974 56899999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDN 458 (598)
Q Consensus 444 GEki~e~~v~~av~~ 458 (598)
|++|++.+||+++.+
T Consensus 425 G~~i~~~~iE~~l~~ 439 (523)
T PRK08316 425 GENVASREVEEALYT 439 (523)
T ss_pred CeEECHHHHHHHHHh
Confidence 999999999999965
No 58
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.23 E-value=9e-10 Score=124.12 Aligned_cols=128 Identities=20% Similarity=0.258 Sum_probs=87.0
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCC---CCCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMC---KPSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
++++++||. ....+.+++.+ |++++ +.||+||+...+...... .+...+. ..|+ .-++.++.+.
T Consensus 327 lr~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~~~~~------ 396 (560)
T PRK08974 327 LKLSVGGGMAVQQAVAERWVKLT-GQYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGL-PVPS-TEIKLVDDDG------ 396 (560)
T ss_pred eeEEEecCccCCHHHHHHHHHHh-CCcEE-eeecccccCceeeccCCCCcccCCcccc-CcCC-CEEEEECCCC------
Confidence 678887874 34456677767 89999 999999964322111110 0111111 1122 2344554221
Q ss_pred CCCCCccccccccCCCCeEEEEEcc---cccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceecccc
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTT---YAGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDS 444 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 444 (598)
.++..|+.|||+|++ ..|+|. |+|||+++++. ...+.|+||.+|++++.|
T Consensus 397 ----------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G 462 (560)
T PRK08974 397 ----------NEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDE----EGFLRIVDRKKDMILVSG 462 (560)
T ss_pred ----------CCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcC----CceEEEEecccceEEeCC
Confidence 245679999999975 356654 99999999873 568999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDN 458 (598)
Q Consensus 445 Eki~e~~v~~av~~ 458 (598)
+++++.+||.+|.+
T Consensus 463 ~~i~~~~IE~~l~~ 476 (560)
T PRK08974 463 FNVYPNEIEDVVML 476 (560)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999965
No 59
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.23 E-value=1.6e-09 Score=121.83 Aligned_cols=128 Identities=20% Similarity=0.271 Sum_probs=86.5
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-ccccCCCCCCC--------CCCceeeecCCeEEEeecCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-FGLNMKPMCKP--------SEVSYTIMPNMGYFEFLPHDP 374 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~~~~--------~~~~~~l~~~~~ffEFip~~~ 374 (598)
++++++||. ...++++++.+++++++ +.||+||+. +++. ...+. ...+.. .++. =.++++.+.
T Consensus 305 l~~i~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~--~~~~~~~~~~~~~~~vG~~-~~~~-~v~i~d~~~ 379 (546)
T PLN02330 305 LQAIMTAAAPLAPELLTAFEAKFPGVQVQ-EAYGLTEHSCITLT--HGDPEKGHGIAKKNSVGFI-LPNL-EVKFIDPDT 379 (546)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHcCCCeEE-ecccccccccceec--CCCccccccccccCccccc-cCCc-EEEEEeCCC
Confidence 566666763 45667788888889999 999999963 3321 11110 001111 1221 133343221
Q ss_pred CCCCCCCCCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecC
Q 007558 375 NSPPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKN 437 (598)
Q Consensus 375 ~~~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~ 437 (598)
...+.+|+.|||+|+. ..|||. |+|||+++++. ...+.|.||.+
T Consensus 380 ---------------~~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----dG~l~~~GR~~ 440 (546)
T PLN02330 380 ---------------GRSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDD----DGDIFIVDRIK 440 (546)
T ss_pred ---------------CccCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeC----CCcEEEEechH
Confidence 1234679999999964 345542 99999999984 46899999999
Q ss_pred ceecccccccCHHHHHHHHHH
Q 007558 438 VLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 438 ~~l~~~GEki~e~~v~~av~~ 458 (598)
+++++.|++|++.+||.++.+
T Consensus 441 d~i~~~G~~v~~~~iE~~l~~ 461 (546)
T PLN02330 441 ELIKYKGFQVAPAELEAILLT 461 (546)
T ss_pred HhhhcCCEEECHHHHHHHHHh
Confidence 999999999999999999965
No 60
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.23 E-value=4.6e-10 Score=129.19 Aligned_cols=132 Identities=14% Similarity=0.146 Sum_probs=85.5
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCC--CCCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPM--CKPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~--~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++.+++||+ ....+.+++.+ |++++ ++||+||+...+..... ..+...+. ..|+. -..+++.++..
T Consensus 378 lr~~~~gGa~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~pg~-~v~i~d~~~~~----- 448 (651)
T PLN02736 378 VRFMSSGASPLSPDVMEFLRICF-GGRVL-EGYGMTETSCVISGMDEGDNLSGHVGS-PNPAC-EVKLVDVPEMN----- 448 (651)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHh-CCCeE-EEechHHhchheeccCCCCCCCCccCC-ccCce-EEEEEEccccC-----
Confidence 778888874 34556666677 68888 99999997433221111 01111111 12222 23344422210
Q ss_pred CCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecc-c
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI-D 443 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~ 443 (598)
. ..+.+++..|||+|.. +.|||. |+|||+++++. ...+.|+||.+|++++ +
T Consensus 449 -----~--~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~----dG~l~i~GR~kd~ik~~~ 517 (651)
T PLN02736 449 -----Y--TSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLP----GGRLKIIDRKKNIFKLAQ 517 (651)
T ss_pred -----c--ccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcC----CCcEEEEEechhheEcCC
Confidence 0 0122345568999964 467774 89999999984 6689999999999997 6
Q ss_pred ccccCHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDN 458 (598)
Q Consensus 444 GEki~e~~v~~av~~ 458 (598)
|++|++.+||.++.+
T Consensus 518 G~~V~p~eIE~~l~~ 532 (651)
T PLN02736 518 GEYIAPEKIENVYAK 532 (651)
T ss_pred CcEechHHHHHHHhc
Confidence 999999999999966
No 61
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.23 E-value=1.8e-09 Score=119.21 Aligned_cols=127 Identities=14% Similarity=0.151 Sum_probs=84.4
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccc-cccCCCCC---CCCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFF-GLNMKPMC---KPSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
++.+++||. ....+.+++. |+++. +.||+||+.. ........ .....+. ..++ .-++.++.+.
T Consensus 266 lr~~~~gG~~~~~~~~~~~~~~--g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-p~~~-~~~~i~d~~~----- 335 (496)
T PRK06839 266 VRWFYNGGAPCPEELMREFIDR--GFLFG-QGFGMTETSPTVFMLSEEDARRKVGSIGK-PVLF-CDYELIDENK----- 335 (496)
T ss_pred cceEEECCCCCCHHHHHHHHHh--CCeeE-eeccCCCCCcceEecccccccccCCCCcc-cCCC-ceEEEECCCc-----
Confidence 677777774 3455666664 68888 9999999742 22111110 0001111 1122 1234444321
Q ss_pred CCCCCCccccccccCCCCeEEEEEccc---ccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceeccc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTTY---AGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSID 443 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 443 (598)
.++.+|+.|||+|++. .|+|. |+|||+++++. ...+.|+||.+|+++..
T Consensus 336 -----------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~ 400 (496)
T PRK06839 336 -----------NKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDE----DGFVYIVGRKKEMIISG 400 (496)
T ss_pred -----------CCCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcC----CCcEEEeccccceEEEC
Confidence 1357799999999764 35543 89999999974 56889999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDN 458 (598)
Q Consensus 444 GEki~e~~v~~av~~ 458 (598)
|++|.+.+||+++.+
T Consensus 401 G~~v~p~~iE~~l~~ 415 (496)
T PRK06839 401 GENIYPLEVEQVINK 415 (496)
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999965
No 62
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.22 E-value=2.2e-10 Score=132.32 Aligned_cols=132 Identities=13% Similarity=0.198 Sum_probs=85.9
Q ss_pred eEEEEeCch--hhhHHHHHhhcCCCCeeccccccccccccccCC-CCC--CCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM--AQYIPTLDHYSGGLPLACTMYASSECFFGLNMK-PMC--KPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~--~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++.+++||+ .+-..++.+.+++++++ ++||+||+....... +.. .+...+. ..|+.. +-.+++++.+
T Consensus 388 lr~~~~Gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~pg~e-vki~d~~~~~----- 459 (666)
T PLN02614 388 VRIILSGAAPLASHVESFLRVVACCHVL-QGYGLTESCAGTFVSLPDELDMLGTVGP-PVPNVD-IRLESVPEME----- 459 (666)
T ss_pred EEEEEEcCCCCCHHHHHHHHHhcCCCEE-eeCchHhhhhheeeeccccCCcCCcccC-cCCceE-EEEeeecccC-----
Confidence 677777874 23344555666678998 999999964322111 110 0111121 122221 1223321110
Q ss_pred CCCCccccccccCCCCeEEEEEcc---cccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceecc-cc
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI-DS 444 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~G 444 (598)
..++.+|+.|||+|.. +.|||+ |+|||+++++. ...|.|+||.+|++++ .|
T Consensus 460 --------~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~gR~kd~ik~~~G 527 (666)
T PLN02614 460 --------YDALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQP----NGSMKIIDRKKNIFKLSQG 527 (666)
T ss_pred --------cccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcC----CCCEEEEEcchhceecCCC
Confidence 0234678999999954 578886 99999999984 6789999999999986 69
Q ss_pred cccCHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDN 458 (598)
Q Consensus 445 Eki~e~~v~~av~~ 458 (598)
|+|++.+||+++.+
T Consensus 528 ~~V~p~eIE~~l~~ 541 (666)
T PLN02614 528 EYVAVENIENIYGE 541 (666)
T ss_pred eeecHHHHHHHHhc
Confidence 99999999999965
No 63
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.22 E-value=6.4e-10 Score=135.51 Aligned_cols=130 Identities=15% Similarity=0.259 Sum_probs=88.5
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-c-cccCCCC----------CCCCCCceeeecCCeEEEeec
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-F-GLNMKPM----------CKPSEVSYTIMPNMGYFEFLP 371 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~-~i~~~~~----------~~~~~~~~~l~~~~~ffEFip 371 (598)
++.+.+||. ....+.+++.+ |++++ +.||+||+. + ..+.... +.+...+. ..|+. -.+.++
T Consensus 900 lr~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-p~~~~-~v~i~d 975 (1146)
T PRK08633 900 LRLVVAGAEKLKPEVADAFEEKF-GIRIL-EGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGM-PLPGV-AVRIVD 975 (1146)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHh-CCCee-cccccccCcceEEEecCcccccccccccCCCCCCccc-cCCCC-EEEEEc
Confidence 778888874 45667777778 78998 999999963 2 2211100 00001111 11221 233333
Q ss_pred CCCCCCCCCCCCCCccccccccCCCCeEEEEEcc---cccccc-----------------cccCCEEEEeeeeCCCCeEE
Q 007558 372 HDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR-----------------YRVGDILLVTGYYNSAPQFR 431 (598)
Q Consensus 372 ~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R-----------------Yr~GDvV~v~gf~~~~P~i~ 431 (598)
+++ ..++.+|+.|||+|+. ..|||+ |+|||+++++. ...+.
T Consensus 976 ~~~---------------~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~----~g~l~ 1036 (1146)
T PRK08633 976 PET---------------FEELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDE----DGFLT 1036 (1146)
T ss_pred CCC---------------CccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcC----CceEE
Confidence 221 1245789999999975 356652 99999999984 67899
Q ss_pred EEeecCceecccccccCHHHHHHHHHHH
Q 007558 432 FVKRKNVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 432 f~gR~~~~l~~~GEki~e~~v~~av~~a 459 (598)
|+||.+|+++++|+++++.|||+++.+.
T Consensus 1037 ~~gR~~d~i~~~G~~v~~~eiE~~l~~~ 1064 (1146)
T PRK08633 1037 ITDRYSRFAKIGGEMVPLGAVEEELAKA 1064 (1146)
T ss_pred EEecccchhhhCcEEECHHHHHHHHHhc
Confidence 9999999999999999999999999763
No 64
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.21 E-value=1e-09 Score=121.74 Aligned_cols=129 Identities=19% Similarity=0.232 Sum_probs=85.6
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCC---CCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCK---PSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~---~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
++.+.+||. ....+.+++.+++++++ +.||+||+.......+... +...+- ..++ ..+..++.+.
T Consensus 276 l~~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~~~~~------ 346 (515)
T TIGR03098 276 LRYLTNSGGAMPRATLSRLRSFLPNARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIGK-AIPN-AEVLVLREDG------ 346 (515)
T ss_pred eEEEEecCCcCCHHHHHHHHHHCCCCeEe-eeeccccccceEecccccccCCCCCcce-ecCC-CEEEEECCCC------
Confidence 677776763 45667778888788888 9999999743221111110 111111 1222 2233343221
Q ss_pred CCCCCccccccccCCCCeEEEEEcc---ccccc-------------------------ccccCCEEEEeeeeCCCCeEEE
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTT---YAGLN-------------------------RYRVGDILLVTGYYNSAPQFRF 432 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt---~~GL~-------------------------RYr~GDvV~v~gf~~~~P~i~f 432 (598)
..+..|+.||+++.+ ..|+| .|+|||+++++. ...+.|
T Consensus 347 ----------~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~ 412 (515)
T TIGR03098 347 ----------SECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDE----EGFLYF 412 (515)
T ss_pred ----------CCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcC----CceEEE
Confidence 133568889999965 34554 278999999873 567899
Q ss_pred EeecCceecccccccCHHHHHHHHHH
Q 007558 433 VKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 433 ~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
.||.+|++++.|+++++.+||+++.+
T Consensus 413 ~GR~~d~i~~~G~~v~~~eiE~~l~~ 438 (515)
T TIGR03098 413 VGRRDEMIKTSGYRVSPTEVEEVAYA 438 (515)
T ss_pred EeccccceecCCEEeCHHHHHHHHhc
Confidence 99999999999999999999999975
No 65
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.21 E-value=7.8e-10 Score=124.55 Aligned_cols=129 Identities=17% Similarity=0.213 Sum_probs=86.7
Q ss_pred eeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCC---CCCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 306 YLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMC---KPSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
.++++.+||. ....+++++.+ +++++ +.||+||+...+...+.. .+...+.. . ...-.+.++.+.
T Consensus 328 ~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~p-~-~g~~v~i~d~~~----- 398 (557)
T PRK07059 328 KLIVANGGGMAVQRPVAERWLEMT-GCPIT-EGYGLSETSPVATCNPVDATEFSGTIGLP-L-PSTEVSIRDDDG----- 398 (557)
T ss_pred hheEEEeccccCCHHHHHHHHHHh-CCCee-eccccccccchhhcCCCCCCCcCCcccCc-c-CCcEEEEECCCC-----
Confidence 3677777774 34556677777 79999 999999974332211111 01111211 1 122344444221
Q ss_pred CCCCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI 442 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 442 (598)
..+.+|+.|||++++ ..|||. |+|||+++++. ...+.|+||.++++++
T Consensus 399 -----------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~~~i~~ 463 (557)
T PRK07059 399 -----------NDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDE----RGYTKIVDRKKDMILV 463 (557)
T ss_pred -----------CCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcC----CCcEEEecccccceEE
Confidence 135678999999975 244442 89999999873 5689999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007558 443 DSDKTDEAELQKGIDN 458 (598)
Q Consensus 443 ~GEki~e~~v~~av~~ 458 (598)
.|++|++.+||++|.+
T Consensus 464 ~G~~i~p~~iE~~l~~ 479 (557)
T PRK07059 464 SGFNVYPNEIEEVVAS 479 (557)
T ss_pred CCEEEcHHHHHHHHHh
Confidence 9999999999999966
No 66
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.21 E-value=3.1e-10 Score=127.96 Aligned_cols=130 Identities=14% Similarity=0.130 Sum_probs=87.6
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccc-cccC--CCCCCCCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFF-GLNM--KPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~--~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
++.+++||. ......+++.+ +++++ +.||+||+.. +... .....+.. ..+..++.. .+.+++++.
T Consensus 325 lr~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~-~G~~~~~~~-~~i~~~~~~----- 395 (563)
T PRK06710 325 IRACISGSAPLPVEVQEKFETVT-GGKLV-EGYGLTESSPVTHSNFLWEKRVPGS-IGVPWPDTE-AMIMSLETG----- 395 (563)
T ss_pred hhheeeCCCcCCHHHHHHHHHhh-CCCEe-cccccccCccccccCcccccccCCc-cCCCCCCCe-EEEEECCCC-----
Confidence 666776763 34556777777 78888 9999999642 2110 00000111 122233332 344443321
Q ss_pred CCCCCccccccccCCCCeEEEEEccc---ccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceecccc
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTTY---AGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDS 444 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt~---~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 444 (598)
..+..|+.|||++++. .|||. |+|||++..+. ...+.|+||.+|+++++|
T Consensus 396 ----------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~~~~~GR~dd~i~~~G 461 (563)
T PRK06710 396 ----------EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDE----DGFFYVKDRKKDMIVASG 461 (563)
T ss_pred ----------ccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcC----CCcEEEeeccccEEEECC
Confidence 2356799999999753 56665 99999998874 568999999999999999
Q ss_pred cccCHHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDNA 459 (598)
Q Consensus 445 Eki~e~~v~~av~~a 459 (598)
++|++.+||+++.+.
T Consensus 462 ~~v~p~eiE~~l~~~ 476 (563)
T PRK06710 462 FNVYPREVEEVLYEH 476 (563)
T ss_pred EEECHHHHHHHHHhC
Confidence 999999999999763
No 67
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.20 E-value=4.6e-09 Score=117.19 Aligned_cols=128 Identities=16% Similarity=0.138 Sum_probs=83.1
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCC--------CCCceeeecCCeEEEeecCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKP--------SEVSYTIMPNMGYFEFLPHDPN 375 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~--------~~~~~~l~~~~~ffEFip~~~~ 375 (598)
++++++||. ......+.+.+ ++++. +.||+||+..++........ ...+. ..++ .-++.++++
T Consensus 283 lr~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~-p~~g-~~v~i~~~~-- 356 (524)
T PRK06188 283 LETVYYGASPMSPVRLAEAIERF-GPIFA-QYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGR-PTPG-LRVALLDED-- 356 (524)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHh-Cchhh-heeCccccCCceeecCchhccccccccCCcccc-ccCC-cEEEEEcCC--
Confidence 677777763 23345555667 56666 99999997433321110000 00011 1111 123333322
Q ss_pred CCCCCCCCCCccccccccCCCCeEEEEEccc---cccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCce
Q 007558 376 SPPLSPESPPRLVDLAHVQVGKQYELVVTTY---AGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVL 439 (598)
Q Consensus 376 ~~~~~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~ 439 (598)
..++..|+.|||++++. .|+| .|+|||+++.+. ...+.|.||.+++
T Consensus 357 --------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~~~ 418 (524)
T PRK06188 357 --------------GREVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDE----DGFYYIVDRKKDM 418 (524)
T ss_pred --------------CCCCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcC----CccEEEEeccccc
Confidence 12456799999999863 4555 399999999974 5689999999999
Q ss_pred ecccccccCHHHHHHHHHH
Q 007558 440 LSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 440 l~~~GEki~e~~v~~av~~ 458 (598)
++++|+++++.+||.++.+
T Consensus 419 i~~~G~~i~~~~IE~~l~~ 437 (524)
T PRK06188 419 IVTGGFNVFPREVEDVLAE 437 (524)
T ss_pred eecCCEEECHHHHHHHHHh
Confidence 9999999999999999865
No 68
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.20 E-value=9.5e-09 Score=114.28 Aligned_cols=129 Identities=16% Similarity=0.178 Sum_probs=87.6
Q ss_pred eeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccc-cccC--CCCCCCCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 306 YLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFF-GLNM--KPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~--~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
.++.+++||. ...++.+++.+ +++++ +.||+||+.. +... +....+...+. ..++. -+++++.+.
T Consensus 272 ~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~d~~~----- 342 (509)
T PRK12406 272 SLRHVIHAAAPCPADVKRAMIEWW-GPVIY-EYYGSTESGAVTFATSEDALSHPGTVGK-AAPGA-ELRFVDEDG----- 342 (509)
T ss_pred ceeEEEEcCCCCCHHHHHHHHHHc-CCcEE-eeccccccCceEecCcccccccCCCcCc-cCCCc-EEEEECCCC-----
Confidence 3777777773 45667788877 78888 9999999643 2210 00011111222 22332 244444221
Q ss_pred CCCCCCccccccccCCCCeEEEEEccc----ccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceecc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTTY----AGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI 442 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt~----~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 442 (598)
..+..|+.+||+++.. .|++. |+|||+++++. ...+.|.||.+|++++
T Consensus 343 -----------~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~d~ik~ 407 (509)
T PRK12406 343 -----------RPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDA----DGYLFLCDRKRDMVIS 407 (509)
T ss_pred -----------CCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcC----CceEEEeecccceEEE
Confidence 2356799999999753 25552 88999999984 5688999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007558 443 DSDKTDEAELQKGIDN 458 (598)
Q Consensus 443 ~GEki~e~~v~~av~~ 458 (598)
+|++|++.+||.+|.+
T Consensus 408 ~G~~v~~~~IE~~l~~ 423 (509)
T PRK12406 408 GGVNIYPAEIEAVLHA 423 (509)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999975
No 69
>PRK12467 peptide synthase; Provisional
Probab=99.19 E-value=6.7e-10 Score=149.60 Aligned_cols=129 Identities=17% Similarity=0.230 Sum_probs=87.2
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCCC-------CCceeeecCCeEEEeecCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPS-------EVSYTIMPNMGYFEFLPHDPNS 376 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~-------~~~~~l~~~~~ffEFip~~~~~ 376 (598)
++.+++||. .....++++.++++.++ +.||.||+.+........... ..|. ..++...+ .++ +.
T Consensus 3353 lr~~~~gGe~~~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~-v~d--~~- 3426 (3956)
T PRK12467 3353 LDIYVFGGEAVPPAAFEQVKRKLKPRGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGR-PVAGRSIY-VLD--GQ- 3426 (3956)
T ss_pred ceEEEEecCCCCHHHHHHHHHhCCCCEEE-eCcccchhEeeeEEEecccccccCCCCCCCcc-ccCCCEEE-EEC--CC-
Confidence 677777773 34456666667788888 999999985433211110000 0011 11222111 111 11
Q ss_pred CCCCCCCCCccccccccCCCCeEEEEEcc---cccccc---------------------cccCCEEEEeeeeCCCCeEEE
Q 007558 377 PPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR---------------------YRVGDILLVTGYYNSAPQFRF 432 (598)
Q Consensus 377 ~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R---------------------Yr~GDvV~v~gf~~~~P~i~f 432 (598)
...|.+|+.|||+|.. ..|||. |||||+++++. ...|+|
T Consensus 3427 -------------~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~----dG~l~~ 3489 (3956)
T PRK12467 3427 -------------LNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRA----DGVIEY 3489 (3956)
T ss_pred -------------CCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecC----CCcEEE
Confidence 1245789999999964 366663 99999999984 779999
Q ss_pred EeecCceecccccccCHHHHHHHHHH
Q 007558 433 VKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 433 ~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
+||.+++++++|.+|...|||.+|.+
T Consensus 3490 ~GR~d~~iki~G~rIe~~EIE~~l~~ 3515 (3956)
T PRK12467 3490 LGRIDHQVKIRGFRIELGEIEARLLQ 3515 (3956)
T ss_pred eccccceEeeceEeecHHHHHHHHhh
Confidence 99999999999999999999999976
No 70
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.19 E-value=3.8e-10 Score=139.38 Aligned_cols=129 Identities=19% Similarity=0.324 Sum_probs=86.6
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCCC---------CCceeeecCCeEEEeecCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPS---------EVSYTIMPNMGYFEFLPHDP 374 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~---------~~~~~l~~~~~ffEFip~~~ 374 (598)
++.++.||. ....+++++.+ +++++ +.||+||+.+.....+.++.. ..+. ..++..+ ..++.+
T Consensus 719 lr~i~~gGe~l~~~~~~~~~~~~-~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~-~i~d~~- 793 (1296)
T PRK10252 719 LRQVFCSGEALPADLCREWQQLT-GAPLH-NLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGY-PVWNTGL-RILDAR- 793 (1296)
T ss_pred ccEEEEecCCCCHHHHHHHHhcC-CCEEE-eCCCcchhhheeeeeecccccccccCCCCCCccc-ccCCCEE-EEECCC-
Confidence 567777763 34556677766 78888 999999975433222211100 0111 1122221 122211
Q ss_pred CCCCCCCCCCCccccccccCCCCeEEEEEcc---cccccc--------------------cccCCEEEEeeeeCCCCeEE
Q 007558 375 NSPPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------------YRVGDILLVTGYYNSAPQFR 431 (598)
Q Consensus 375 ~~~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------------Yr~GDvV~v~gf~~~~P~i~ 431 (598)
...+..|+.|||+|+. ..|||. |+|||+++++. ...+.
T Consensus 794 ---------------~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----~G~l~ 854 (1296)
T PRK10252 794 ---------------MRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLD----DGAVE 854 (1296)
T ss_pred ---------------CCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcC----CCcEE
Confidence 1245679999999975 345542 99999999984 67899
Q ss_pred EEeecCceecccccccCHHHHHHHHHHH
Q 007558 432 FVKRKNVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 432 f~gR~~~~l~~~GEki~e~~v~~av~~a 459 (598)
|+||.+++++++|++|...+||.+|.+.
T Consensus 855 ~~GR~d~~ik~~G~ri~~~eIE~~l~~~ 882 (1296)
T PRK10252 855 YLGRSDDQLKIRGQRIELGEIDRAMQAL 882 (1296)
T ss_pred EecccCCeEEEeeEEecHHHHHHHHHhC
Confidence 9999999999999999999999999763
No 71
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.18 E-value=1.4e-09 Score=119.99 Aligned_cols=129 Identities=19% Similarity=0.280 Sum_probs=83.7
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCC--CCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCK--PSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~--~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++.+++||. ....+.+++.+ +++++ +.||+||+.+.+....... +...+. ..++ .-.++++.+ +
T Consensus 243 l~~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~vG~-~~~g-~~~~i~d~~--~----- 311 (471)
T PRK07787 243 ARLLVSGSAALPVPVFDRLAALT-GHRPV-ERYGMTETLITLSTRADGERRPGWVGL-PLAG-VETRLVDED--G----- 311 (471)
T ss_pred eeEEEECCCCCCHHHHHHHHHHc-CCCee-cccCccccCcceecCCCCcccCCcccc-cCCC-cEEEEECCC--C-----
Confidence 677777874 35567777777 78898 9999999754321111100 111111 1122 123333322 1
Q ss_pred CCCCccccccccCCCC-eEEEEEcc---ccccc--------------ccccCCEEEEeeeeCCCCeEEEEeec-Cceecc
Q 007558 382 ESPPRLVDLAHVQVGK-QYELVVTT---YAGLN--------------RYRVGDILLVTGYYNSAPQFRFVKRK-NVLLSI 442 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~-~yelvvTt---~~GL~--------------RYr~GDvV~v~gf~~~~P~i~f~gR~-~~~l~~ 442 (598)
..+. ..|+ .|||++++ ..|+| -|+|||++.++. ...+.++||. +++++.
T Consensus 312 ----~~~~----~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~----dg~l~~~GR~~d~~i~~ 379 (471)
T PRK07787 312 ----GPVP----HDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDP----DGMHRIVGRESTDLIKS 379 (471)
T ss_pred ----CCCC----CCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcC----CCCEEEeCCCCceeEee
Confidence 1221 1243 68999975 35666 299999999973 5689999996 899999
Q ss_pred cccccCHHHHHHHHHH
Q 007558 443 DSDKTDEAELQKGIDN 458 (598)
Q Consensus 443 ~GEki~e~~v~~av~~ 458 (598)
+|+|+++.+||++|..
T Consensus 380 ~G~~v~~~eIE~~l~~ 395 (471)
T PRK07787 380 GGYRIGAGEIETALLG 395 (471)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999975
No 72
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.17 E-value=4.4e-09 Score=117.32 Aligned_cols=129 Identities=16% Similarity=0.235 Sum_probs=90.8
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccc--cccccCCCCC-CCCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSEC--FFGLNMKPMC-KPSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg--~~~i~~~~~~-~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
++.+.+||+ .+...++++.+|...+. .+||.||. .++++.+... .++..+. +.+ +.-=.+..+..
T Consensus 301 l~~v~~gga~~~~~~~~~~~~~l~~~~v~-q~YGmTE~~~~~~~~~~~~e~k~~svG~-~~~--g~~~~v~~e~g----- 371 (537)
T KOG1176|consen 301 LRSVLSGGAPLSPATLEKVKERLPNVTVI-QGYGMTEAGGLITSNDWGPERKPGSVGR-LLP--GVRVKVLDETG----- 371 (537)
T ss_pred cEEEEecCCCCCHHHHHHHHHhCCCceEE-EeeccccccCceeecCCCccCcccccCc-ccc--ceEEEeeCCCC-----
Confidence 566655553 45667888888657777 99999995 4566655442 2223333 233 21111222211
Q ss_pred CCCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceeccc
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSID 443 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 443 (598)
..+.+++.|||++-. ..|||. |+|||+.-++ ....|.|++|.+|+|+.+
T Consensus 372 ----------~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D----~DG~l~IvdR~KdlIk~~ 437 (537)
T KOG1176|consen 372 ----------VSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFD----EDGYLYIVDRSKDLIKYG 437 (537)
T ss_pred ----------CCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEc----CCCeEEEecchhhheeeC
Confidence 244678899999943 478887 9999997777 588999999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDN 458 (598)
Q Consensus 444 GEki~e~~v~~av~~ 458 (598)
|+++++.|||++|..
T Consensus 438 G~qv~P~EiE~vL~~ 452 (537)
T KOG1176|consen 438 GEQVSPAEIEAVLLT 452 (537)
T ss_pred CEEeCHHHHHHHHHh
Confidence 999999999999976
No 73
>PRK08315 AMP-binding domain protein; Validated
Probab=99.16 E-value=7.6e-09 Score=116.31 Aligned_cols=130 Identities=13% Similarity=0.109 Sum_probs=85.2
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCC-----CCCCceeeecCCeEEEeecCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCK-----PSEVSYTIMPNMGYFEFLPHDPNSPP 378 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~-----~~~~~~~l~~~~~ffEFip~~~~~~~ 378 (598)
|++++.||. ....+.+.+.++..+++ +.||+||+........... +...+. ..++ .-++.++.++.
T Consensus 317 lr~~~~~G~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~~-~~v~i~d~~~~--- 390 (559)
T PRK08315 317 LRTGIMAGSPCPIEVMKRVIDKMHMSEVT-IAYGMTETSPVSTQTRTDDPLEKRVTTVGR-ALPH-LEVKIVDPETG--- 390 (559)
T ss_pred hheeEecCCCCCHHHHHHHHHHcCCccee-EEEcccccccceeecCcccchhhccCCCCc-cCCC-cEEEEEcCccC---
Confidence 677666663 34556777777555688 9999999743221111000 001111 1122 23444443311
Q ss_pred CCCCCCCccccccccCCCCeEEEEEccc---cccc--------------ccccCCEEEEeeeeCCCCeEEEEeecCceec
Q 007558 379 LSPESPPRLVDLAHVQVGKQYELVVTTY---AGLN--------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLS 441 (598)
Q Consensus 379 ~~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 441 (598)
..+..|+.|||+|... .||| .|+|||+++.+. ...+.|+||.+++++
T Consensus 391 ------------~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~d~~i~ 454 (559)
T PRK08315 391 ------------ETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDE----EGYVNIVGRIKDMII 454 (559)
T ss_pred ------------CcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcC----CceEEEEeeccceEE
Confidence 1345799999999643 4444 399999999873 568999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007558 442 IDSDKTDEAELQKGIDN 458 (598)
Q Consensus 442 ~~GEki~e~~v~~av~~ 458 (598)
+.|+++...+||+++.+
T Consensus 455 ~~G~~v~~~eIE~~l~~ 471 (559)
T PRK08315 455 RGGENIYPREIEEFLYT 471 (559)
T ss_pred ECCEEEcHHHHHHHHHh
Confidence 99999999999999975
No 74
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.15 E-value=7e-10 Score=138.08 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=84.8
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCCCCCceeeecCCeEE----EeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPSEVSYTIMPNMGYF----EFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ff----EFip~~~~~~~~ 379 (598)
++.++.||. .....+++..+++++++ +.||+||+.+.+.......... +..|+ +++|....-
T Consensus 531 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~G~~~--- 599 (1389)
T TIGR03443 531 LHHAFFVGDILTKRDCLRLQTLAENVCIV-NMYGTTETQRAVSYFEIPSRSS-------DSTFLKNLKDVMPAGKGM--- 599 (1389)
T ss_pred ccEEEEecccCCHHHHHHHHHhCCCCEEE-ECccCCccceeEEEEEcccccc-------ccchhhcccCcCcCCCcc---
Confidence 455555652 34456667777789999 9999999754322110000000 00111 111211100
Q ss_pred CCCCCCcccc----ccccCCCCeEEEEEcc---ccccc------------------------------------------
Q 007558 380 SPESPPRLVD----LAHVQVGKQYELVVTT---YAGLN------------------------------------------ 410 (598)
Q Consensus 380 ~~~~~~~~v~----~~eve~G~~yelvvTt---~~GL~------------------------------------------ 410 (598)
.+....+++ ...+.+|+.|||+|.. ..|||
T Consensus 600 -~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (1389)
T TIGR03443 600 -KNVQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDR 678 (1389)
T ss_pred -CCCEEEEECCccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccc
Confidence 000001111 1235679999999954 35666
Q ss_pred ccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 411 RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 411 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
-|+|||+++++. ...+.|+||.+|+|+++|++|.+.+||.+|.+
T Consensus 679 ~y~TGDlg~~~~----dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~ 722 (1389)
T TIGR03443 679 LYRTGDLGRYLP----DGNVECCGRADDQVKIRGFRIELGEIDTHLSQ 722 (1389)
T ss_pred eeecCCceeEcC----CCCEEEecccCCEEEeCcEEecHHHHHHHHHh
Confidence 299999999984 57899999999999999999999999999976
No 75
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.14 E-value=6.4e-10 Score=125.22 Aligned_cols=129 Identities=17% Similarity=0.210 Sum_probs=85.9
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCC---CCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCK---PSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~---~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
|+.+.+||. ....+++++.+ |++++ +.||+||+...+...+... +...+. ..++ .-...++.+
T Consensus 331 lr~v~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~-~~v~i~d~~------- 399 (560)
T PRK08751 331 LKMTLGGGMAVQRSVAERWKQVT-GLTLV-EAYGLTETSPAACINPLTLKEYNGSIGL-PIPS-TDACIKDDA------- 399 (560)
T ss_pred heeeeeCCCCCCHHHHHHHHHHh-CCeEE-EeeccccCCCceecccccccccCCCcCc-cCCC-ceEEEECCC-------
Confidence 677777773 34556777777 78888 9999999743332111100 000111 1111 122233311
Q ss_pred CCCCCccccccccCCCCeEEEEEccc---ccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceeccc
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTTY---AGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSID 443 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt~---~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 443 (598)
..++..|+.|||+|++. .|||. |+|||+++++. ...+.|+||.+|++++.
T Consensus 400 ---------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~GR~~d~i~~~ 466 (560)
T PRK08751 400 ---------GTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDE----QGFVYIVDRKKDMILVS 466 (560)
T ss_pred ---------CCCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcC----CceEEEEeechhheeEC
Confidence 12356788999999753 45553 89999999873 67899999999999999
Q ss_pred ccccCHHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDNA 459 (598)
Q Consensus 444 GEki~e~~v~~av~~a 459 (598)
|+++.+.+||.+|.+.
T Consensus 467 G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 467 GFNVYPNEIEDVIAMM 482 (560)
T ss_pred CEEEcHHHHHHHHHhC
Confidence 9999999999999663
No 76
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.14 E-value=2.9e-09 Score=123.62 Aligned_cols=132 Identities=14% Similarity=0.227 Sum_probs=83.8
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCC--CCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCK--PSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~--~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++.+++||+ ....+.++..+ |++++ ++||+||+..+.......+ ....+- ..|+ .-...+++++.+
T Consensus 422 lr~i~~GGapl~~~~~~~~~~~~-g~~v~-~~YG~TEt~~~~~~~~~~~~~~gsvG~-p~p~-~evkivd~~~~~----- 492 (696)
T PLN02387 422 IRFMLSGGAPLSGDTQRFINICL-GAPIG-QGYGLTETCAGATFSEWDDTSVGRVGP-PLPC-CYVKLVSWEEGG----- 492 (696)
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc-CCCee-EeechhhcccceeecCcccCCCCccCC-CCCc-eEEEEeeccccC-----
Confidence 788888885 23334445556 79999 9999999743221111111 111111 1122 234444433221
Q ss_pred CCCCccccccccCCCCeEEEEEcc---ccccc------------------ccccCCEEEEeeeeCCCCeEEEEeecCcee
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLN------------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLL 440 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 440 (598)
..+.. +++..|||+|.. +.||| -|+|||+++++. ...+.|+||.+|++
T Consensus 493 ----~~~~~---~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~----dG~l~i~gR~kd~i 561 (696)
T PLN02387 493 ----YLISD---KPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHP----DGCLEIIDRKKDIV 561 (696)
T ss_pred ----cccCC---CCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECC----CCcEEEEEcccceE
Confidence 01111 234467999954 57777 378999999984 67899999999999
Q ss_pred cc-cccccCHHHHHHHHHH
Q 007558 441 SI-DSDKTDEAELQKGIDN 458 (598)
Q Consensus 441 ~~-~GEki~e~~v~~av~~ 458 (598)
++ .||+|++.+||+++.+
T Consensus 562 k~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 562 KLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred ECCCCeEEchHHHHHHHhc
Confidence 97 6999999999999865
No 77
>PRK12467 peptide synthase; Provisional
Probab=99.14 E-value=2e-09 Score=145.03 Aligned_cols=148 Identities=18% Similarity=0.278 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCC
Q 007558 277 NPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKP 353 (598)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~ 353 (598)
.|..+..|.+..... ..+. ++.+++||. ....+++.+.+++++++ +.||.||+.+.+........
T Consensus 754 ~Ps~~~~l~~~~~~~--------~~~~---lr~i~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~ 821 (3956)
T PRK12467 754 VPSHLQALLQASRVA--------LPRP---QRALVCGGEALQVDLLARVRALGPGARLI-NHYGPTETTVGVSTYELSDE 821 (3956)
T ss_pred CHHHHHHHHhhhccc--------cCCc---ccEEEEEeecCCHHHHHHHHHhCCCCEEE-eCcCCChhhhheeeEecccc
Confidence 666666665433211 1234 466666763 34556676777789999 99999997543321111000
Q ss_pred CC------CceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEcc---cccccc-------------
Q 007558 354 SE------VSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR------------- 411 (598)
Q Consensus 354 ~~------~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R------------- 411 (598)
.. .|. ..++.. +..++.+ ...|.+|+.|||+|+. ..|||+
T Consensus 822 ~~~~~~~~iG~-p~~~~~-~~i~d~~----------------~~~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p 883 (3956)
T PRK12467 822 ERDFGNVPIGQ-PLANLG-LYILDHY----------------LNPVPVGVVGELYIGGAGLARGYHRRPALTAERFVPDP 883 (3956)
T ss_pred cccCCCCcccC-CcCCCE-EEEECCC----------------CCCCCCCCceEEEecccccchhhcCCccccHhhCcCCC
Confidence 00 111 122322 2222211 1245679999999974 356654
Q ss_pred --------cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 412 --------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 412 --------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
|||||+++.+. ...+.|+||.+++++++|++|.+.+||.+|.+
T Consensus 884 ~~~~g~r~yrTGDl~~~~~----dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~ 934 (3956)
T PRK12467 884 FGADGGRLYRTGDLARYRA----DGVIEYLGRMDHQVKIRGFRIELGEIEARLLA 934 (3956)
T ss_pred CCCCCceeEecCceeEEcC----CCcEEEeccccCeEEECCEecCHHHHHHHHHh
Confidence 99999999973 67899999999999999999999999999976
No 78
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.13 E-value=1.6e-08 Score=113.44 Aligned_cols=64 Identities=8% Similarity=0.072 Sum_probs=54.3
Q ss_pred ccCCCCeEEEEEcc---ccccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHH
Q 007558 392 HVQVGKQYELVVTT---YAGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKG 455 (598)
Q Consensus 392 eve~G~~yelvvTt---~~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~a 455 (598)
.+.+|+.|||+++. ..|+| .|+|||+++++. ...+.|+||.+|++++.|+++++.+||.+
T Consensus 380 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eiE~~ 455 (545)
T PRK07768 380 VLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTE----EGEVVVCGRVKDVIIMAGRNIYPTDIERA 455 (545)
T ss_pred CCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEec----CCEEEEEccccceEEECCEecCHHHHHHH
Confidence 45678999999975 24555 399999999973 56899999999999999999999999999
Q ss_pred HHHH
Q 007558 456 IDNA 459 (598)
Q Consensus 456 v~~a 459 (598)
|.+.
T Consensus 456 l~~~ 459 (545)
T PRK07768 456 AARV 459 (545)
T ss_pred HHhC
Confidence 9774
No 79
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.13 E-value=9.1e-10 Score=127.07 Aligned_cols=132 Identities=12% Similarity=0.167 Sum_probs=81.8
Q ss_pred eEEEEeCch--hhhHHHHHhhcCCCCeeccccccccccccccCCC-CC--CCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM--AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKP-MC--KPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~--~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~-~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++.+++||+ .+-..++.+.++.++++ ++||+||+..++...+ .. .....+. ..|+.. .-+++.++.+
T Consensus 385 lr~~~~Ggapl~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~p~~e-v~i~d~~~~g----- 456 (660)
T PLN02861 385 VRLLLSGAAPLPRHVEEFLRVTSCSVLS-QGYGLTESCGGCFTSIANVFSMVGTVGV-PMTTIE-ARLESVPEMG----- 456 (660)
T ss_pred EEEEEECCCCCCHHHHHHHHHHcCCCee-EecchhhhhhceeecccccCCCCCCccC-ccCceE-EEEEEccccC-----
Confidence 678888875 22233444555445677 9999999643221111 10 0111121 122221 1222211111
Q ss_pred CCCCccccccccCCCCeEEEEEcc---cccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceecc-cc
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI-DS 444 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~G 444 (598)
...+.+|..|||+|.. +.|||+ |+|||+++++. ...+.|+||.+|+|++ +|
T Consensus 457 --------~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~GR~kd~Ik~~~G 524 (660)
T PLN02861 457 --------YDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQP----NGAMKIIDRKKNIFKLSQG 524 (660)
T ss_pred --------cccCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECC----CCcEEEEeccccceEcCCC
Confidence 0112345678999953 578885 99999999984 6789999999999997 79
Q ss_pred cccCHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDN 458 (598)
Q Consensus 445 Eki~e~~v~~av~~ 458 (598)
|+|++.+||+++.+
T Consensus 525 ~~I~p~eIE~~l~~ 538 (660)
T PLN02861 525 EYVAVENLENTYSR 538 (660)
T ss_pred eEEcHHHHHHHHhc
Confidence 99999999999965
No 80
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.13 E-value=1.5e-08 Score=118.35 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=39.8
Q ss_pred cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 412 YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 412 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
|+|||+++++. ...+.|+||.+|+||++|++|...|||++|..
T Consensus 591 ~~tGDl~~~d~----dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~ 633 (728)
T PLN03052 591 RRHGDIFERTS----GGYYRAHGRADDTMNLGGIKVSSVEIERVCNA 633 (728)
T ss_pred EecCceEEECC----CCeEEEEecCCCEEeeCCEEeCHHHHHHHHHh
Confidence 89999999984 67899999999999999999999999999964
No 81
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=99.12 E-value=1.2e-09 Score=116.09 Aligned_cols=131 Identities=18% Similarity=0.236 Sum_probs=86.6
Q ss_pred CCceeEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-c-cccCCCCCCCCCC---ceeeecCCeEEEeecCCC
Q 007558 303 NTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-F-GLNMKPMCKPSEV---SYTIMPNMGYFEFLPHDP 374 (598)
Q Consensus 303 ~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~-~i~~~~~~~~~~~---~~~l~~~~~ffEFip~~~ 374 (598)
+++.++..+.||+ .....++.... .+..+.-.||.||.. + .+.+ +.+++++. -++++++.
T Consensus 348 ~~s~lr~~vigGa~~s~eLlk~iv~~~-~m~~i~v~YG~TEts~v~~~~~-~~D~~~~~~ksVG~~m~h~---------- 415 (596)
T KOG1177|consen 348 DLSSLRKGVIGGAPVSPELLKLIVNQM-NMKDIAVAYGLTETSPVLFMSL-LGDPPEERIKSVGHLMDHY---------- 415 (596)
T ss_pred chhhhhhheeCCCCCCHHHHHHHHHhh-CceeeEEEeeccccCcceeeec-CCCCHHHHHhhhhhccccc----------
Confidence 3444566666664 34445555444 455555899999953 2 2211 22222111 12332211
Q ss_pred CCCCCCCCCCCcccc--ccccCCCCeEEEEE---cccccccc--------------cccCCEEEEeeeeCCCCeEEEEee
Q 007558 375 NSPPLSPESPPRLVD--LAHVQVGKQYELVV---TTYAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKR 435 (598)
Q Consensus 375 ~~~~~~~~~~~~~v~--~~eve~G~~yelvv---Tt~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR 435 (598)
+..+++ .-+++.|..|||++ +|..|||- |+|||+.+++. ...++++||
T Consensus 416 ---------Ea~iv~~~g~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~e----nG~i~iVGR 482 (596)
T KOG1177|consen 416 ---------EAAIVDKDGSEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDE----NGTIEIVGR 482 (596)
T ss_pred ---------ccccccCCCCccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcC----CCcEEEEEc
Confidence 112232 23567788899999 56788988 99999999994 789999999
Q ss_pred cCceecccccccCHHHHHHHHHH
Q 007558 436 KNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 436 ~~~~l~~~GEki~e~~v~~av~~ 458 (598)
.+|||..+||+|.+.|||+.+.+
T Consensus 483 skdmI~rGGENVyP~ElE~fL~~ 505 (596)
T KOG1177|consen 483 SKDMIIRGGENVYPTELEDFLNK 505 (596)
T ss_pred ccCeEEeCCcccChHHHHHHHhh
Confidence 99999999999999999999976
No 82
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.12 E-value=3e-09 Score=119.39 Aligned_cols=127 Identities=14% Similarity=0.165 Sum_probs=82.9
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-ccccCCCCCCC---CCCceeeecCCeEEEeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-FGLNMKPMCKP---SEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~~~~---~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
++.+++||. ......++. + |++++ +.||+||+. +++.....+.. ...+. .. ....++.++.+.
T Consensus 304 lr~i~~gG~~~~~~~~~~~~~-~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~-~~~~~~i~d~~~----- 373 (547)
T PRK06087 304 LRFFLCGGTTIPKKVARECQQ-R-GIKLL-SVYGSTESSPHAVVNLDDPLSRFMHTDGY-AA-AGVEIKVVDEAR----- 373 (547)
T ss_pred eEEEEEcCCCCCHHHHHHHHH-c-CCcEE-EEecccccCCccccCCCcchhhcCCcCCc-cC-CCceEEEEcCCC-----
Confidence 777777774 233444544 3 78999 999999963 32211111100 00111 11 223445544221
Q ss_pred CCCCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI 442 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 442 (598)
.++..|+.|||++.+ ..|+|. |+|||+++++. .+.+.|.||.+|++++
T Consensus 374 -----------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~~ 438 (547)
T PRK06087 374 -----------KTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDE----AGYIKITGRKKDIIVR 438 (547)
T ss_pred -----------CCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECC----CCCEEEEecchhhhhc
Confidence 144678899999854 244432 89999999973 5678999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007558 443 DSDKTDEAELQKGIDN 458 (598)
Q Consensus 443 ~GEki~e~~v~~av~~ 458 (598)
.|+++++.+|+++|..
T Consensus 439 ~G~~v~p~~iE~~l~~ 454 (547)
T PRK06087 439 GGENISSREVEDILLQ 454 (547)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999965
No 83
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.12 E-value=2.5e-09 Score=122.57 Aligned_cols=64 Identities=19% Similarity=0.172 Sum_probs=54.5
Q ss_pred cccCCCCeEEEEEcc---cccccc-------------------------------cccCCEEEEeeeeCCCCeEEEEeec
Q 007558 391 AHVQVGKQYELVVTT---YAGLNR-------------------------------YRVGDILLVTGYYNSAPQFRFVKRK 436 (598)
Q Consensus 391 ~eve~G~~yelvvTt---~~GL~R-------------------------------Yr~GDvV~v~gf~~~~P~i~f~gR~ 436 (598)
.++..|+.|||+|.. ..|||. |+|||++++. ...+.|+||.
T Consensus 411 ~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-----dG~l~i~GR~ 485 (631)
T PRK07769 411 SELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-----DGELYITGRV 485 (631)
T ss_pred cCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-----CCEEEEEccc
Confidence 356789999999964 355552 8999999885 4689999999
Q ss_pred CceecccccccCHHHHHHHHHHH
Q 007558 437 NVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 437 ~~~l~~~GEki~e~~v~~av~~a 459 (598)
+|+|+++|++|++.|||.+|.+.
T Consensus 486 ~d~Ik~~G~~V~p~eIE~~l~~~ 508 (631)
T PRK07769 486 KDLVIIDGRNHYPQDLEYTAQEA 508 (631)
T ss_pred ccEEEECCeeeCHHHHHHHHHhc
Confidence 99999999999999999999763
No 84
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.11 E-value=2.2e-09 Score=124.96 Aligned_cols=125 Identities=19% Similarity=0.238 Sum_probs=78.2
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCC--CCCCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKP--MCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~--~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++.+++||. ....+.+++.+ |++++ +.||+||+...+...+ ...+...+. ..|+.. ...++.+
T Consensus 481 lr~i~~gg~~l~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~-p~pg~~-~~i~d~~-------- 548 (718)
T PRK08043 481 LRYVVAGAEKLQESTKQLWQDKF-GLRIL-EGYGVTECAPVVSINVPMAAKPGTVGR-ILPGMD-ARLLSVP-------- 548 (718)
T ss_pred eEEEEEeCccCCHHHHHHHHHHc-CCCee-cccCcccccceEEecCCcccCCCCCCC-cCCCCe-eEEecCC--------
Confidence 778887774 34556677777 79998 9999999742211111 001111111 111111 1111111
Q ss_pred CCCCccccccccCCCCeEEEEEcc---ccccc-----------------------ccccCCEEEEeeeeCCCCeEEEEee
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLN-----------------------RYRVGDILLVTGYYNSAPQFRFVKR 435 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~-----------------------RYr~GDvV~v~gf~~~~P~i~f~gR 435 (598)
. .|+.+||.+.. ..||| .|+|||+++++. ...+.|+||
T Consensus 549 ----------~--~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~l~i~GR 612 (718)
T PRK08043 549 ----------G--IEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDE----QGFVQIQGR 612 (718)
T ss_pred ----------C--CCCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcC----CCcEEEEec
Confidence 0 23446666632 23433 289999999983 668999999
Q ss_pred cCceecccccccCHHHHHHHHHHH
Q 007558 436 KNVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 436 ~~~~l~~~GEki~e~~v~~av~~a 459 (598)
.+|++++.|++|++.+||+++...
T Consensus 613 ~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 613 AKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred CCCeeEeCcEEcCHHHHHHHHHhC
Confidence 999999999999999999998663
No 85
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.11 E-value=2.9e-08 Score=110.09 Aligned_cols=129 Identities=16% Similarity=0.148 Sum_probs=86.5
Q ss_pred CceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccc-cccCCCCC---CCCCCceeeecCCeEEEeecCCCCC
Q 007558 304 TKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFF-GLNMKPMC---KPSEVSYTIMPNMGYFEFLPHDPNS 376 (598)
Q Consensus 304 l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~ 376 (598)
+..+++++.||. ...++.+++.+ +.+++ ..||+||+.. .+. ...+ .+...+..+ .+-++.++.+ +
T Consensus 261 ~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~-~~yG~tE~~~~~~~-~~~~~~~~~~~~G~~~---~~~~~i~d~~--~ 332 (502)
T PRK08276 261 VSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIH-EYYASSEGGGVTVI-TSEDWLAHPGSVGKAV---LGEVRILDED--G 332 (502)
T ss_pred cccceEEEecCCCCCHHHHHHHHHHh-CcHhh-hhcccccccceeEe-cCccccccCCCcceec---ccEEEEECCC--C
Confidence 344788888874 45567777777 67777 8999999642 211 1111 011112222 1233334321 1
Q ss_pred CCCCCCCCCccccccccCCCCeEEEEEccc---cccc--------------ccccCCEEEEeeeeCCCCeEEEEeecCce
Q 007558 377 PPLSPESPPRLVDLAHVQVGKQYELVVTTY---AGLN--------------RYRVGDILLVTGYYNSAPQFRFVKRKNVL 439 (598)
Q Consensus 377 ~~~~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~ 439 (598)
..+..|+.|||++++. .|+| .|+|||+++++. ...+.++||.+++
T Consensus 333 --------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~~~ 394 (502)
T PRK08276 333 --------------NELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDE----DGYLYLTDRKSDM 394 (502)
T ss_pred --------------CCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcC----CcCEEEeccCcce
Confidence 1346789999999842 3443 378999999983 5689999999999
Q ss_pred ecccccccCHHHHHHHHHH
Q 007558 440 LSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 440 l~~~GEki~e~~v~~av~~ 458 (598)
++++|+++++.+||.++.+
T Consensus 395 i~~~G~~v~~~~iE~~i~~ 413 (502)
T PRK08276 395 IISGGVNIYPQEIENLLVT 413 (502)
T ss_pred EEeCCEEeCHHHHHHHHHh
Confidence 9999999999999999975
No 86
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.11 E-value=2.3e-09 Score=124.96 Aligned_cols=130 Identities=15% Similarity=0.232 Sum_probs=83.3
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccc--cccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFF--GLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~--~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++.+++||+ ....+.++..+ |+++. .+||+||+.. .++......+...+..+.|.. -+..++.++..
T Consensus 463 lr~~~sGGapl~~~~~~~~~~~~-g~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg~-e~ki~d~~~~~----- 534 (746)
T PTZ00342 463 LEVILNGGGKLSPKIAEELSVLL-NVNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISPNT-KYKVRTWETYK----- 534 (746)
T ss_pred eEEEEEcCCCCCHHHHHHHHHhc-CCCEE-EeeccCcccceeeeccCCCCCcccccCcCCCcE-EEEEecccccc-----
Confidence 778888885 34456666667 79998 9999999632 221110001111122111221 12222222110
Q ss_pred CCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecc-c
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI-D 443 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~ 443 (598)
....+..|||+|.. +.|||+ |+|||+++++. ...+.|+||.++++++ .
T Consensus 535 ----------~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~----dG~l~i~gR~kdlIkls~ 600 (746)
T PTZ00342 535 ----------ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINK----NGSLTFLDRSKGLVKLSQ 600 (746)
T ss_pred ----------cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECC----CCeEEEEccCCCeEEeCC
Confidence 11234568999953 578875 99999999984 6799999999999985 7
Q ss_pred ccccCHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDN 458 (598)
Q Consensus 444 GEki~e~~v~~av~~ 458 (598)
||+|++.+||+++.+
T Consensus 601 Ge~I~p~eIE~~l~~ 615 (746)
T PTZ00342 601 GEYIETDMLNNLYSQ 615 (746)
T ss_pred CEEEchHHHHHHHhc
Confidence 999999999999965
No 87
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.11 E-value=1.1e-08 Score=114.44 Aligned_cols=253 Identities=14% Similarity=0.114 Sum_probs=149.0
Q ss_pred CHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccc-cccccCCCCC-
Q 007558 277 NPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSEC-FFGLNMKPMC- 351 (598)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg-~~~i~~~~~~- 351 (598)
.|...+.|++...+. .. .| +.+.|+++.++|- ..-...+.+.++..||. +.||.||+ .+.+...+..
T Consensus 338 ~pt~~r~l~~~~~~~-----~~-~~-~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~-e~~~qtEtG~~~i~~~~g~~ 409 (626)
T KOG1175|consen 338 APTAYRLLRRLGQED-----VT-SY-SLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIY-ETYGQTETGGICITPKPGKL 409 (626)
T ss_pred ccHHHHHHHHhcccc-----cc-cc-ccceEEEEeecCccCCcchHHHHHHhcCccchh-hceeeeccCceeeeccCCCC
Confidence 566666666655432 11 12 2244788877762 23335666777334677 99999995 3333222221
Q ss_pred CCCCCceeeecCCe-EEEeecCCCCCCCCCCCCCCccccccccCCC-CeEEEEEccc------ccccc------------
Q 007558 352 KPSEVSYTIMPNMG-YFEFLPHDPNSPPLSPESPPRLVDLAHVQVG-KQYELVVTTY------AGLNR------------ 411 (598)
Q Consensus 352 ~~~~~~~~l~~~~~-ffEFip~~~~~~~~~~~~~~~~v~~~eve~G-~~yelvvTt~------~GL~R------------ 411 (598)
|. ..++.=.|..+ .++.++++ ..+++.+ +.++|+++.. .++|+
T Consensus 410 p~-~pg~~~~p~~g~~v~i~de~----------------g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k 472 (626)
T KOG1175|consen 410 PI-KPGSAGKPFPGYDVQILDEN----------------GNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKK 472 (626)
T ss_pred Cc-CccccCCCCCCcceEEECCC----------------CCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhccc
Confidence 11 11111122222 23333331 1233433 7889999642 33444
Q ss_pred ----cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEeecCCCCCceE-
Q 007558 412 ----YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYADTTTIPGHY- 486 (598)
Q Consensus 412 ----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~~Y- 486 (598)
|.|||-++.+ +...|.|.||.+|+||+.|-+++..|||+||.+.- .|.|-+|+.......|.-
T Consensus 473 ~pg~y~tGD~~~rd----~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp--------~VaEsAvVg~p~~~~ge~v 540 (626)
T KOG1175|consen 473 FPGYYFTGDGGRRD----EDGYYWILGRVDDVINVSGHRIGTAEIESALVEHP--------AVAESAVVGSPDPIKGEVV 540 (626)
T ss_pred CCceEEecCceEEc----CCceEEEEecccccccccceeecHHHHHHHHhhCc--------chhheeeecCCCCCCCeEE
Confidence 9999999999 68999999999999999999999999999996532 122334332111122333
Q ss_pred EEEEEEeecccCCCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEe----CCChHHHHHHHHHhcCCCCCCCC
Q 007558 487 VIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVV----KNGTFEELMDYAISRGASINQYK 562 (598)
Q Consensus 487 ~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v----~~gtF~~~~~~~~~~G~~~~Q~K 562 (598)
.+|+-+.. ++ .+ .+++.++|-..+ |...|-+..|+..+. +.=...+.|+..+.+-.+.-|++
T Consensus 541 ~aFvvl~~-g~---~~---~~~L~kel~~~V-------R~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~ 606 (626)
T KOG1175|consen 541 LAFVVLKS-GS---HD---PEQLTKELVKHV-------RSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVG 606 (626)
T ss_pred EEEEEEcC-CC---CC---hHHHHHHHHHHH-------HhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCccc
Confidence 35665642 21 22 233445666666 645555555555443 33345567777665544444888
Q ss_pred CCcccCCHhHHHHHhccc
Q 007558 563 APRCVSFTPILELLNGRV 580 (598)
Q Consensus 563 ~Pr~~~~~~~~~~L~~~~ 580 (598)
-.-.+.|+++++.+.+.+
T Consensus 607 d~st~~dp~v~~~~~~~~ 624 (626)
T KOG1175|consen 607 DTSTLADPSVIDHLRSIL 624 (626)
T ss_pred cccccCChHHHHHHHHhh
Confidence 899999999999988754
No 88
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.11 E-value=4.5e-09 Score=118.19 Aligned_cols=136 Identities=19% Similarity=0.218 Sum_probs=83.7
Q ss_pred eEEEEeCc-h-hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCCCCC
Q 007558 307 LDVIVTGA-M-AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESP 384 (598)
Q Consensus 307 l~~~~~g~-~-~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~ 384 (598)
++++. |+ . .....++.+.+ +++++ +.||+||+...+...+..++...+.. .++ .+++..+.... ..
T Consensus 267 l~~~~-G~~~~~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~p-~~g---~~i~~~~~~~~-----~~ 334 (540)
T PRK13388 267 LRVAF-GNEASPRDIAEFSRRF-GCQVE-DGYGSSEGAVIVVREPGTPPGSIGRG-APG---VAIYNPETLTE-----CA 334 (540)
T ss_pred eEEEE-CCCCCHHHHHHHHHHh-CCcee-cccccccccceeecCCCCCCCCCCCC-CCC---cEEEcCCCCcc-----cc
Confidence 44443 44 2 34456666777 78898 99999997433221222222222332 233 34443322100 00
Q ss_pred Cccccc--ccc-CCCCeEEEEEc-c---ccccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceecccc
Q 007558 385 PRLVDL--AHV-QVGKQYELVVT-T---YAGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDS 444 (598)
Q Consensus 385 ~~~v~~--~ev-e~G~~yelvvT-t---~~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 444 (598)
...++- ..+ ..|+.|||+++ . ..||| .|+|||+++++. ...+.|+||.+++++++|
T Consensus 335 ~~~~d~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~----dg~l~i~GR~~d~i~~~G 410 (540)
T PRK13388 335 VARFDAHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDA----DGWIYFAGRTADWMRVDG 410 (540)
T ss_pred ceeccCccccccCCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcC----CCcEEEeccCCceEEECC
Confidence 001110 011 24678999997 3 34666 399999999974 568999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDN 458 (598)
Q Consensus 445 Eki~e~~v~~av~~ 458 (598)
+++++.+||.+|.+
T Consensus 411 ~~v~p~eIE~~l~~ 424 (540)
T PRK13388 411 ENLSAAPIERILLR 424 (540)
T ss_pred EEeCHHHHHHHHHh
Confidence 99999999999866
No 89
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.11 E-value=1.4e-08 Score=111.87 Aligned_cols=147 Identities=14% Similarity=0.161 Sum_probs=90.4
Q ss_pred CCHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeecccccccccccc-ccCCCCC
Q 007558 276 PNPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFG-LNMKPMC 351 (598)
Q Consensus 276 ~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~-i~~~~~~ 351 (598)
..|..+..|.+...+. -.+ ..+++++.||. ...++.+++ + +++++ ..||+||.... +...+..
T Consensus 235 ~~P~~~~~l~~~~~~~--------~~~--~~lr~~~~~g~~~~~~~~~~~~~-~-~~~~~-~~YG~tE~~~~~~~~~~~~ 301 (483)
T PRK03640 235 VVSTMLQRLLERLGEG--------TYP--SSFRCMLLGGGPAPKPLLEQCKE-K-GIPVY-QSYGMTETASQIVTLSPED 301 (483)
T ss_pred eHHHHHHHHHhCcCcc--------ccC--CcceEEEEcCCCCCHHHHHHHHH-h-CCCee-eeeccCcccccccccCccc
Confidence 3677677665433221 111 12677777763 233445554 4 79999 99999995321 1111110
Q ss_pred ---CCCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEccc---cccc-------------cc
Q 007558 352 ---KPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTTY---AGLN-------------RY 412 (598)
Q Consensus 352 ---~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~-------------RY 412 (598)
.+...+. ..++..+ ...+ + ..++.+|+.|||+|++. .|++ .|
T Consensus 302 ~~~~~~~vG~-p~~~~~~-~i~~--~---------------~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~ 362 (483)
T PRK03640 302 ALTKLGSAGK-PLFPCEL-KIEK--D---------------GVVVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWF 362 (483)
T ss_pred ccccCCCccc-ccCCcEE-EEec--C---------------CCcCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCe
Confidence 0011111 1122111 1111 1 02456799999999863 4444 48
Q ss_pred ccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 413 RVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 413 r~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
+|||+++++. ...+.|.||.++++++.|++++..+||+++.+
T Consensus 363 ~tGDl~~~~~----~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~ 404 (483)
T PRK03640 363 KTGDIGYLDE----EGFLYVLDRRSDLIISGGENIYPAEIEEVLLS 404 (483)
T ss_pred eccceEEEcC----CCCEEEeecccCeEEeCCEEECHHHHHHHHHh
Confidence 9999999984 56799999999999999999999999999965
No 90
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.10 E-value=4e-08 Score=109.38 Aligned_cols=127 Identities=17% Similarity=0.131 Sum_probs=85.7
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccc-cccCCCCCC--CCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFF-GLNMKPMCK--PSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~~--~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
++.+++||. ....+.+++.+ |++++ ..||+||+.. .......+. +...+. +..+..+.++.+.
T Consensus 277 l~~~~~gg~~~~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~---~~~g~~~i~d~~~------ 345 (511)
T PRK13391 277 LEVAIHAAAPCPPQVKEQMIDWW-GPIIH-EYYAATEGLGFTACDSEEWLAHPGTVGR---AMFGDLHILDDDG------ 345 (511)
T ss_pred eeEEEEccCCCCHHHHHHHHHHc-CCcee-eeeccccccceEEecCccccccCCCcCC---cccceEEEECCCC------
Confidence 677777773 45567778877 67777 9999999743 211111110 111121 1112344444221
Q ss_pred CCCCCccccccccCCCCeEEEEEccc--ccccc---------------cccCCEEEEeeeeCCCCeEEEEeecCceeccc
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTTY--AGLNR---------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSID 443 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt~--~GL~R---------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 443 (598)
..++.|+.|||++... -|+|. |+|||+++++. ...+.|+||.+|++++.
T Consensus 346 ----------~~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~----~g~l~~~gR~~~~i~~~ 411 (511)
T PRK13391 346 ----------AELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDE----DGYLYLTDRAAFMIISG 411 (511)
T ss_pred ----------CCCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEECC----CccEEEeccCCCEEEeC
Confidence 1346788999999752 34553 78999999874 67899999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDN 458 (598)
Q Consensus 444 GEki~e~~v~~av~~ 458 (598)
|+++++.+|+++|.+
T Consensus 412 G~~v~~~eie~~l~~ 426 (511)
T PRK13391 412 GVNIYPQEAENLLIT 426 (511)
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999975
No 91
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.10 E-value=1.6e-08 Score=112.50 Aligned_cols=128 Identities=17% Similarity=0.127 Sum_probs=81.9
Q ss_pred eEEEEeCc--hhhhHHHHHhhcCCCCeeccccccccccccccCC-CCC--CCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGA--MAQYIPTLDHYSGGLPLACTMYASSECFFGLNMK-PMC--KPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~--~~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++++..++ ....+..+.+.+ +++++ +.||+||+...+... +.. .....+. ..+ ..-.+.++.+
T Consensus 290 l~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~-g~~~~i~d~~-------- 357 (517)
T PRK08008 290 LREVMFYLNLSDQEKDAFEERF-GVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGR-PGF-CYEAEIRDDH-------- 357 (517)
T ss_pred ceeeEEecCCCHHHHHHHHHHh-CCeEE-eeccccccccccccCCccccccCCcccc-CCC-CcEEEEECCC--------
Confidence 44444444 234556677777 78999 999999974322111 100 0000111 011 1223333321
Q ss_pred CCCCccccccccCCCCeEEEEEccc------ccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceec
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTTY------AGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLS 441 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt~------~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 441 (598)
..++..|+.|||+++.. .|+|. |+|||++.++. ...+.|+||.+++++
T Consensus 358 --------~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i~ 425 (517)
T PRK08008 358 --------NRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDE----EGFFYFVDRRCNMIK 425 (517)
T ss_pred --------CCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECC----CCcEEEeecccceEE
Confidence 12456799999999742 34442 89999998874 578999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007558 442 IDSDKTDEAELQKGIDN 458 (598)
Q Consensus 442 ~~GEki~e~~v~~av~~ 458 (598)
+.|++|++.+||.++.+
T Consensus 426 ~~G~~i~p~~iE~~l~~ 442 (517)
T PRK08008 426 RGGENVSCVELENIIAT 442 (517)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 99999999999999965
No 92
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.09 E-value=3.7e-09 Score=120.28 Aligned_cols=140 Identities=15% Similarity=0.200 Sum_probs=82.8
Q ss_pred eEEEEeCch-hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCCCCCceeeec---CCeEEEeecCCCCCCCCCCC
Q 007558 307 LDVIVTGAM-AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPSEVSYTIMP---NMGYFEFLPHDPNSPPLSPE 382 (598)
Q Consensus 307 l~~~~~g~~-~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~---~~~ffEFip~~~~~~~~~~~ 382 (598)
++++..++. ....+++.+.++...++ +.||+||+.+++.. ....++..+..... ...+..+-+ +... .
T Consensus 316 l~~~~g~~l~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~-~---- 387 (600)
T PRK08279 316 LRLMIGNGLRPDIWDEFQQRFGIPRIL-EFYAASEGNVGFIN-VFNFDGTVGRVPLWLAHPYAIVKYDV-DTGE-P---- 387 (600)
T ss_pred eeEEecCCCCHHHHHHHHHHhCcceee-eeecccccceeecc-cCCCCcccccccccccccceeeeecc-CcCc-e----
Confidence 455544443 45567777888544577 99999997543321 11111112211110 111221111 1100 0
Q ss_pred CCCccccccccCCCCeEEEEEc-----cccccc-------------------ccccCCEEEEeeeeCCCCeEEEEeecCc
Q 007558 383 SPPRLVDLAHVQVGKQYELVVT-----TYAGLN-------------------RYRVGDILLVTGYYNSAPQFRFVKRKNV 438 (598)
Q Consensus 383 ~~~~~v~~~eve~G~~yelvvT-----t~~GL~-------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~ 438 (598)
-....-.+.++.+|+.+|+++. .+.|+. -|+|||+++++. ...+.|.||.+|
T Consensus 388 i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~----dG~l~~~GR~~d 463 (600)
T PRK08279 388 VRDADGRCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDG----FGHAQFVDRLGD 463 (600)
T ss_pred eeCCCCccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcC----CccEEEecccCC
Confidence 0000011235678999999842 234431 189999999984 568999999999
Q ss_pred eecccccccCHHHHHHHHHH
Q 007558 439 LLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 439 ~l~~~GEki~e~~v~~av~~ 458 (598)
+++++|++|++.+||++|.+
T Consensus 464 ~ik~~G~~i~p~eIE~~l~~ 483 (600)
T PRK08279 464 TFRWKGENVATTEVENALSG 483 (600)
T ss_pred eEEECCcccCHHHHHHHHhc
Confidence 99999999999999999976
No 93
>PRK12316 peptide synthase; Provisional
Probab=99.08 E-value=9.1e-09 Score=141.31 Aligned_cols=149 Identities=15% Similarity=0.130 Sum_probs=94.7
Q ss_pred CHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCC---C
Q 007558 277 NPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKP---M 350 (598)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~---~ 350 (598)
.|..++.|....... ...|. ++++++||. ....+++.+.+++++++ +.||.||+.+...... .
T Consensus 2243 ~P~~~~~l~~~~~~~-------~~~~~---lr~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~ 2311 (5163)
T PRK12316 2243 PPVYLQQLAEHAERD-------GRPPA---VRVYCFGGEAVPAASLRLAWEALRPVYLF-NGYGPTEAVVTPLLWKCRPQ 2311 (5163)
T ss_pred ChHHHHHHHhhhhcc-------cCCcc---eeEEEEecccCCHHHHHHHHHhCCCcEEE-ECccchhheeeeeeeecccc
Confidence 566666665443221 12234 778888873 34445565666778888 9999999854321111 1
Q ss_pred CCCC----CCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEcc---cccccc------------
Q 007558 351 CKPS----EVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR------------ 411 (598)
Q Consensus 351 ~~~~----~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R------------ 411 (598)
.+.. ..|. ..++.. .-.++.+ ...|.+|+.|||+|.. ..|||.
T Consensus 2312 ~~~~~~~~~iG~-p~~~~~-~~i~d~~----------------~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~ 2373 (5163)
T PRK12316 2312 DPCGAAYVPIGR-ALGNRR-AYILDAD----------------LNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPD 2373 (5163)
T ss_pred cccCCCcCCccc-ccCCCE-EEEECCC----------------CCCCCCCCeeEEEecchhhcccccCChhhhhhhccCC
Confidence 1000 0111 111211 1112211 1245789999999964 355552
Q ss_pred ---------cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 412 ---------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 412 ---------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
|||||+++++. ...+.|+||.+++++++|++|...|||.+|.+
T Consensus 2374 ~~~~~~~~~yrTGDl~~~~~----dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~ 2425 (5163)
T PRK12316 2374 PFSASGERLYRTGDLARYRA----DGVVEYLGRIDHQVKIRGFRIELGEIEARLQA 2425 (5163)
T ss_pred CCCCCCCeeEecccEEEEcC----CCcEEEecCCCCeEEEcCccCChHHHHHHHhh
Confidence 99999999983 67899999999999999999999999999976
No 94
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.07 E-value=5.1e-09 Score=117.71 Aligned_cols=154 Identities=15% Similarity=0.116 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHhccCCCcccccccCCCCceeEEEEeCchh---hhHHHHHhhcCCCCeeccccccccccc-cccCCCCC-
Q 007558 277 NPELAEFITKECSGEKWDGIITRIWPNTKYLDVIVTGAMA---QYIPTLDHYSGGLPLACTMYASSECFF-GLNMKPMC- 351 (598)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~---~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~- 351 (598)
.|..+..|.+..... . .-.|. ++.+.+||.. .....+ +.+ |+++. +.||+||+.. .+......
T Consensus 267 ~P~~~~~l~~~~~~~-----~-~~~~~---lr~~~~gG~~~~~~~~~~~-~~~-g~~i~-~~YG~TE~~~~~~~~~~~~~ 334 (540)
T PRK05857 267 VPTLLSKLVSELKSA-----N-ATVPS---LRLVGYGGSRAIAADVRFI-EAT-GVRTA-QVYGLSETGCTALCLPTDDG 334 (540)
T ss_pred ChHHHHHHHhccccC-----C-CcCcc---ceEEEEcCccCCchhHHHH-HHh-CCeee-cccCCCcCCceeeecccccc
Confidence 566676665543321 1 12344 6777777742 222333 445 78888 9999999632 22110000
Q ss_pred -----CCCCCceeeecCCeEEEeecCCCCCCCCCCCCCCccccccccCCCCeEEEEEccc---cccc-------------
Q 007558 352 -----KPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPRLVDLAHVQVGKQYELVVTTY---AGLN------------- 410 (598)
Q Consensus 352 -----~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~v~~~eve~G~~yelvvTt~---~GL~------------- 410 (598)
.+...+ ...++.. ..+++.+.. ..+....+..|+.|||+|+.. .|||
T Consensus 335 ~~~~~~~~~~G-~~~~g~~-v~i~d~~~~----------~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g 402 (540)
T PRK05857 335 SIVKIEAGAVG-RPYPGVD-VYLAATDGI----------GPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDG 402 (540)
T ss_pred cccccccCCcC-cccCCcE-EEEECcccc----------CccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCC
Confidence 000111 1222222 222332211 122233456788999999763 5666
Q ss_pred ccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 411 RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 411 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
-|+|||+++++. ...+.|+||.+++++++|+++++.+||.++..
T Consensus 403 ~~~TGDlg~~d~----~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~ 446 (540)
T PRK05857 403 WVNTGDLLERRE----DGFFYIKGRSSEMIICGGVNIAPDEVDRIAEG 446 (540)
T ss_pred ceeccceEEEcC----CceEEEeccccccEecCCEEECHHHHHHHHHh
Confidence 299999999873 67899999999999999999999999999965
No 95
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.06 E-value=3.2e-08 Score=111.77 Aligned_cols=121 Identities=17% Similarity=0.227 Sum_probs=78.4
Q ss_pred hhhHHHHHhhcCCCCeeccccccccccccccCCC--CCC-------CCCCceeeecCCeEEEeecCCCCCCCCCCCCCCc
Q 007558 316 AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKP--MCK-------PSEVSYTIMPNMGYFEFLPHDPNSPPLSPESPPR 386 (598)
Q Consensus 316 ~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~--~~~-------~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~ 386 (598)
....+.+++.+ |..++...||+||......... .+. +...+ ...|+. -+++++++..
T Consensus 341 ~~~~~~~~~~~-g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG-~p~~g~-~v~v~d~~~~----------- 406 (567)
T PRK06178 341 PDYRQRWRALT-GSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVG-LPVPGT-EFKICDFETG----------- 406 (567)
T ss_pred HHHHHHHHHHh-CCcccccccccccccccceeccccccCccccccCCcccc-cccCCc-EEEEEcCCCC-----------
Confidence 45667777777 5556646899999632211111 000 00011 122222 2445543322
Q ss_pred cccccccCCCCeEEEEEccc---cccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHH
Q 007558 387 LVDLAHVQVGKQYELVVTTY---AGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEA 450 (598)
Q Consensus 387 ~v~~~eve~G~~yelvvTt~---~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~ 450 (598)
..+..|+.|||+|++. .|+| .|+|||++++++ ...+.|+||.+|+++++|+++++.
T Consensus 407 ----~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~i~~~ 478 (567)
T PRK06178 407 ----ELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDE----QGFLHYLGRRKEMLKVNGMSVFPS 478 (567)
T ss_pred ----CcCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEec----CCeEEEEecccccEEECCEEECHH
Confidence 1345788999999642 4444 389999999974 568999999999999999999999
Q ss_pred HHHHHHHH
Q 007558 451 ELQKGIDN 458 (598)
Q Consensus 451 ~v~~av~~ 458 (598)
+||+++.+
T Consensus 479 eiE~~l~~ 486 (567)
T PRK06178 479 EVEALLGQ 486 (567)
T ss_pred HHHHHHHh
Confidence 99999865
No 96
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.06 E-value=2.7e-08 Score=110.44 Aligned_cols=127 Identities=14% Similarity=0.149 Sum_probs=83.2
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-ccccCCCCC--CCCCCceeeecCCeEEEeecCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-FGLNMKPMC--KPSEVSYTIMPNMGYFEFLPHDPNSPPLS 380 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 380 (598)
++.+++||. ....+.+++.+ +++++ ..||+||+. +.....+.. .+...+. ..++ . .+.++.+
T Consensus 272 l~~v~~~g~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~g-~-~~i~d~~------- 339 (501)
T PRK13390 272 LRAVIHAAAPCPVDVKHAMIDWL-GPIVY-EYYSSTEAHGMTFIDSPDWLAHPGSVGR-SVLG-D-LHICDDD------- 339 (501)
T ss_pred hheEEEcCCCCCHHHHHHHHHhc-CCcee-eeecccccCceEEecchhhccCCCCcCC-cccc-e-EEEECCC-------
Confidence 677777763 34456677777 68888 899999973 221101110 0001111 1122 1 2333311
Q ss_pred CCCCCccccccccCCCCeEEEEEccc---cccc----------------ccccCCEEEEeeeeCCCCeEEEEeecCceec
Q 007558 381 PESPPRLVDLAHVQVGKQYELVVTTY---AGLN----------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLS 441 (598)
Q Consensus 381 ~~~~~~~v~~~eve~G~~yelvvTt~---~GL~----------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 441 (598)
...+.+|+.|||+|.+. .|+| -|+|||+++++. ...+.|.||.+++++
T Consensus 340 ---------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~----dg~l~~~gR~~~~i~ 406 (501)
T PRK13390 340 ---------GNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE----DGYLYLADRKSFMII 406 (501)
T ss_pred ---------CCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC----CCeEEEeecccccee
Confidence 12346799999999653 3443 259999999984 578999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007558 442 IDSDKTDEAELQKGIDN 458 (598)
Q Consensus 442 ~~GEki~e~~v~~av~~ 458 (598)
+.|+++++.+||++|..
T Consensus 407 ~~G~~v~p~eIE~~l~~ 423 (501)
T PRK13390 407 SGGVNIYPQETENALTM 423 (501)
T ss_pred ECCeeeCHHHHHHHHHh
Confidence 99999999999999964
No 97
>PRK12316 peptide synthase; Provisional
Probab=99.06 E-value=1.9e-09 Score=147.88 Aligned_cols=129 Identities=17% Similarity=0.190 Sum_probs=86.5
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCC----CCCCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPM----CKPSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~----~~~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
++.+++||. ....+++.+.+++++++ +.||.||+.+.+..... ......|. ..++..+ ..++.+
T Consensus 772 l~~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~-~i~d~~------ 842 (5163)
T PRK12316 772 LRRIVCSGEALPADAQEQVFAKLPQAGLY-NLYGPTEAAIDVTHWTCVEEGGDSVPIGR-PIANLAC-YILDAN------ 842 (5163)
T ss_pred ccEEEEeeccCCHHHHHHHHHhCCCCeEE-eCcCcChheeeeeEEecccccCCCCCCcc-ccCCCEE-EEECCC------
Confidence 566666763 34456665666789999 99999998643221110 00001111 1222221 122211
Q ss_pred CCCCCCccccccccCCCCeEEEEEcc---cccccc--------------------cccCCEEEEeeeeCCCCeEEEEeec
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------------YRVGDILLVTGYYNSAPQFRFVKRK 436 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------------Yr~GDvV~v~gf~~~~P~i~f~gR~ 436 (598)
...+..|+.|||+|.. ..||+. |+|||+++.+. ...+.|+||.
T Consensus 843 ----------~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----dG~l~~~GR~ 908 (5163)
T PRK12316 843 ----------LEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRA----DGVIEYAGRI 908 (5163)
T ss_pred ----------CCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECC----CCCEEeeccc
Confidence 1245679999999964 356653 99999999984 6799999999
Q ss_pred CceecccccccCHHHHHHHHHH
Q 007558 437 NVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 437 ~~~l~~~GEki~e~~v~~av~~ 458 (598)
+++++++|++|.+.|||.+|.+
T Consensus 909 d~~ik~~G~rI~~~EIE~~l~~ 930 (5163)
T PRK12316 909 DHQVKLRGLRIELGEIEARLLE 930 (5163)
T ss_pred CCEEEEceEEcChHHHHHHHHh
Confidence 9999999999999999999976
No 98
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.06 E-value=5.4e-08 Score=108.21 Aligned_cols=128 Identities=13% Similarity=0.125 Sum_probs=84.4
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCCC--CCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCK--PSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~--~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++.+++||. ....+.+++.+ +++++ +.||+||..........++ ....+. ..++ .-++.++ ++.
T Consensus 280 l~~~~~~G~~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~g-~~v~i~d-~~~------ 348 (508)
T TIGR02262 280 LRLCTSAGEALPAEVGQRWQARF-GVDIV-DGIGSTEMLHIFLSNLPGDVRYGTSGK-PVPG-YRLRLVG-DGG------ 348 (508)
T ss_pred ceeEEEcCCCCCHHHHHHHHHHh-CCchh-hCccccccCceeecCCccCCCCCCcCC-CCCC-cEEEEEC-CCC------
Confidence 566666663 34556777778 78888 9999999632111111110 000111 1122 2245555 211
Q ss_pred CCCCccccccccCCCCeEEEEEccc---cccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceeccccc
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTTY---AGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSD 445 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt~---~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GE 445 (598)
..+.+|+.|||+++.. .||| .|+|||+++... ...+.|.||.+|++++.|+
T Consensus 349 ---------~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~gR~~d~i~~~G~ 415 (508)
T TIGR02262 349 ---------QDVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRND----DGSYTYAGRTDDMLKVSGI 415 (508)
T ss_pred ---------CCCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcC----CccEEEeccccceeeeCCE
Confidence 1346789999999753 4554 379999988863 5689999999999999999
Q ss_pred ccCHHHHHHHHHH
Q 007558 446 KTDEAELQKGIDN 458 (598)
Q Consensus 446 ki~e~~v~~av~~ 458 (598)
++++.+|++++.+
T Consensus 416 ~v~~~~ie~~l~~ 428 (508)
T TIGR02262 416 YVSPFEIESALIQ 428 (508)
T ss_pred EECHHHHHHHHHh
Confidence 9999999999976
No 99
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.06 E-value=1.5e-08 Score=111.60 Aligned_cols=60 Identities=10% Similarity=0.179 Sum_probs=51.9
Q ss_pred CCCeEEEEEcc---cccccc--------cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 395 VGKQYELVVTT---YAGLNR--------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 395 ~G~~yelvvTt---~~GL~R--------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
.|+.|||+|.. ..|+|. |+|||+++++ ....+.|+||.+|+++++|+||++.+||.++.+
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~ 368 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLD----AQGYLHILGRNSQKIITGGENVYPAEVEAAILA 368 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEc----CCCCEEEEeecCCEEEECCEEECHHHHHHHHHh
Confidence 48899999943 456663 8999999987 367899999999999999999999999999976
No 100
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.05 E-value=6.3e-08 Score=109.61 Aligned_cols=64 Identities=22% Similarity=0.280 Sum_probs=54.1
Q ss_pred cccCCCCeEEEEEcc---ccccc-------------------------ccccCCEEEEeeeeCCCCeEEEEeecCceecc
Q 007558 391 AHVQVGKQYELVVTT---YAGLN-------------------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSI 442 (598)
Q Consensus 391 ~eve~G~~yelvvTt---~~GL~-------------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 442 (598)
.++++|+.|||.|.. ..||| -|+|||++.++ ...+.|+||.+|++++
T Consensus 390 ~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-----~G~l~~~GR~~d~i~~ 464 (578)
T PRK05850 390 IECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-----EGELFIVGRIKDLLIV 464 (578)
T ss_pred cCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-----CCEEEEEcccccEEEE
Confidence 356789999999965 34655 38999999875 3589999999999999
Q ss_pred cccccCHHHHHHHHHHH
Q 007558 443 DSDKTDEAELQKGIDNA 459 (598)
Q Consensus 443 ~GEki~e~~v~~av~~a 459 (598)
+|++|++.+||.+|.+.
T Consensus 465 ~G~~i~p~eIE~~l~~~ 481 (578)
T PRK05850 465 DGRNHYPDDIEATIQEI 481 (578)
T ss_pred CCeecCHHHHHHHHHHh
Confidence 99999999999999763
No 101
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.05 E-value=6.4e-09 Score=116.47 Aligned_cols=62 Identities=13% Similarity=0.180 Sum_probs=53.7
Q ss_pred cCCCCeEEEEEcc---cccccc---------cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHH
Q 007558 393 VQVGKQYELVVTT---YAGLNR---------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 393 ve~G~~yelvvTt---~~GL~R---------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a 459 (598)
|..|+.|||+|+. ..|||. |+|||+++++ ...+.|+||.+|++++.|++|++.+||.+|.+.
T Consensus 367 ~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~-----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 367 VAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV-----DGGLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred CCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE-----CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 6779999999965 367774 9999999875 357999999999999999999999999999773
No 102
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.04 E-value=7.4e-09 Score=117.56 Aligned_cols=59 Identities=12% Similarity=0.197 Sum_probs=51.7
Q ss_pred CCeEEEEEcc---ccccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 396 GKQYELVVTT---YAGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 396 G~~yelvvTt---~~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
|+.|||+|++ +.||| +|+|||+++++. ...+.|+||.+|++++.|++|++.+||.++.+
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~ 464 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHP----DGHVEIKDRSKDIIISGGENISSVEVENVLYK 464 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEcC----CCeEEEEeccCcEEEECCEEECHHHHHHHHHh
Confidence 3679999975 46777 499999999973 67899999999999999999999999999976
No 103
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.01 E-value=5.6e-08 Score=105.44 Aligned_cols=58 Identities=12% Similarity=0.093 Sum_probs=50.8
Q ss_pred CCCeEEEEEcccccccccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 395 VGKQYELVVTTYAGLNRYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 395 ~G~~yelvvTt~~GL~RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
.|+.+|+++++..| .|+|||+++++. ...+.|+||.++++++.|++|++.+||.++.+
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~~----dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~ 335 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKSE----RGTLHFMGRMDDVINVSGLNVYPIEVEDVMLR 335 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEECC----CccEEEecccCCeEEECCEEECHHHHHHHHHh
Confidence 46778999988766 478999999874 56899999999999999999999999999976
No 104
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.01 E-value=8.9e-08 Score=108.61 Aligned_cols=63 Identities=11% Similarity=0.063 Sum_probs=53.9
Q ss_pred ccCCCCeEEEEEcc---ccccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHH
Q 007558 392 HVQVGKQYELVVTT---YAGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKG 455 (598)
Q Consensus 392 eve~G~~yelvvTt---~~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~a 455 (598)
++..|+.+||+++. ..||| .|+|||++.+ . ...+.|+||.+|+++++|++|++.+||++
T Consensus 405 ~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~ 479 (579)
T PRK09192 405 PLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL-L----DGYLYITGRAKDLIIINGRNIWPQDIEWI 479 (579)
T ss_pred CCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-E----CCEEEEEeccccEEEECCCccCHHHHHHH
Confidence 45678999999965 35666 3899999987 3 56899999999999999999999999999
Q ss_pred HHHH
Q 007558 456 IDNA 459 (598)
Q Consensus 456 v~~a 459 (598)
|.+.
T Consensus 480 l~~~ 483 (579)
T PRK09192 480 AEQE 483 (579)
T ss_pred HHhc
Confidence 9874
No 105
>PRK05691 peptide synthase; Validated
Probab=99.01 E-value=2.1e-08 Score=136.44 Aligned_cols=129 Identities=16% Similarity=0.195 Sum_probs=87.1
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCC-CC---CCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPM-CK---PSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~-~~---~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
++.+++||. ....+++.+.+++++++ +.||.||+.+.+..... .. ....+. ..++. .+..++.+
T Consensus 1390 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~-p~~~~-~~~i~d~~------ 1460 (4334)
T PRK05691 1390 LRRLFSGGEALPAELRNRVLQRLPQVQLH-NRYGPTETAINVTHWQCQAEDGERSPIGR-PLGNV-LCRVLDAE------ 1460 (4334)
T ss_pred ccEEEEeecCCCHHHHHHHHHhCCCcEEE-eCCCcChheeeeeeeecccccCCCCcccc-eeCCC-EEEEECCC------
Confidence 667777773 34556777777789999 99999997543321110 00 001111 12222 22233321
Q ss_pred CCCCCCccccccccCCCCeEEEEEcc---ccccc---------------------ccccCCEEEEeeeeCCCCeEEEEee
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTT---YAGLN---------------------RYRVGDILLVTGYYNSAPQFRFVKR 435 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~---------------------RYr~GDvV~v~gf~~~~P~i~f~gR 435 (598)
...|.+|+.|||+|.. ..||+ -|+|||+++... ...+.|+||
T Consensus 1461 ----------~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~----dG~l~~~GR 1526 (4334)
T PRK05691 1461 ----------LNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNA----DGALEYLGR 1526 (4334)
T ss_pred ----------CCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECC----CCCEEEecc
Confidence 1245679999999964 24544 299999999984 678999999
Q ss_pred cCceecccccccCHHHHHHHHHH
Q 007558 436 KNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 436 ~~~~l~~~GEki~e~~v~~av~~ 458 (598)
.+++++++|++|...|||.+|.+
T Consensus 1527 ~d~qiki~G~rie~~eIE~~l~~ 1549 (4334)
T PRK05691 1527 LDQQVKLRGFRVEPEEIQARLLA 1549 (4334)
T ss_pred cCcEEEECCEEcCHHHHHHHHHh
Confidence 99999999999999999999976
No 106
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.01 E-value=8.4e-08 Score=108.67 Aligned_cols=131 Identities=16% Similarity=0.175 Sum_probs=81.8
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCC-CCC---CCCCCceee----ecCCeEEEeecCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMK-PMC---KPSEVSYTI----MPNMGYFEFLPHDPN 375 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~---~~~~~~~~l----~~~~~ffEFip~~~~ 375 (598)
+++++.||. ....+.+++.+ |++++ +.||+||+....... +.. ......+.. .+...-++.++.
T Consensus 300 l~~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~--- 374 (576)
T PRK05620 300 LQEIYVGGSAVPPILIKAWEERY-GVDVV-HVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND--- 374 (576)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHh-CCcee-eeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC---
Confidence 677777773 34556677777 78998 999999973211110 100 000000000 011122233331
Q ss_pred CCCCCCCCCCccccccccCCCCeEEEEEcc---ccccc------------------------------ccccCCEEEEee
Q 007558 376 SPPLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLN------------------------------RYRVGDILLVTG 422 (598)
Q Consensus 376 ~~~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~------------------------------RYr~GDvV~v~g 422 (598)
+ ..+ +...|+.|||+++. ..||| -|+|||+++++.
T Consensus 375 g---------~~~---~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~ 442 (576)
T PRK05620 375 G---------QVM---ESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTR 442 (576)
T ss_pred C---------ccc---cCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcC
Confidence 1 111 11346789999964 24444 289999999874
Q ss_pred eeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 423 YYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 423 f~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
...+.|.||.++++++.|++|.+.+||.++.+
T Consensus 443 ----dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~ 474 (576)
T PRK05620 443 ----DGFLTIHDRARDVIRSGGEWIYSAQLENYIMA 474 (576)
T ss_pred ----CceEEEEechhhhhhcCCEEEcHHHHHHHHhc
Confidence 56899999999999999999999999999975
No 107
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.00 E-value=9.1e-09 Score=118.84 Aligned_cols=61 Identities=16% Similarity=0.278 Sum_probs=51.8
Q ss_pred CCCCeEEEEEcc---cccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceecc-cccccCHHHHHHHH
Q 007558 394 QVGKQYELVVTT---YAGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI-DSDKTDEAELQKGI 456 (598)
Q Consensus 394 e~G~~yelvvTt---~~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~GEki~e~~v~~av 456 (598)
..|..|||+|.. +.|||+ |+|||+++++. ...+.|+||.+|++++ .||+|++.+||.++
T Consensus 461 ~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~----dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l 536 (660)
T PLN02430 461 GEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILP----NGVLKIIDRKKNLIKLSQGEYVALEYLENVY 536 (660)
T ss_pred CCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECC----CCcEEEEEcccccEEcCCCcEEchHHHHHHH
Confidence 345679999964 478875 99999999973 6789999999999996 69999999999988
Q ss_pred HH
Q 007558 457 DN 458 (598)
Q Consensus 457 ~~ 458 (598)
.+
T Consensus 537 ~~ 538 (660)
T PLN02430 537 GQ 538 (660)
T ss_pred hc
Confidence 55
No 108
>PRK05691 peptide synthase; Validated
Probab=99.00 E-value=2.5e-08 Score=135.82 Aligned_cols=130 Identities=17% Similarity=0.225 Sum_probs=84.8
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccC---CCCCCCCC---CceeeecCCeEEEeecCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNM---KPMCKPSE---VSYTIMPNMGYFEFLPHDPNSP 377 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~---~~~~~~~~---~~~~l~~~~~ffEFip~~~~~~ 377 (598)
++.++.||- ....+++.+.++++.++ +.||.||+.+.+.. +....... .+. ..++...+ .++ +.
T Consensus 3985 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~-v~d--~~-- 4057 (4334)
T PRK05691 3985 LRWMLPTGEAMPPELARQWLQRYPQIGLV-NAYGPAECSDDVAFFRVDLASTRGSYLPIGS-PTDNNRLY-LLD--EA-- 4057 (4334)
T ss_pred ceEEEecCCcCCHHHHHHHHHhCCCCeEE-eCccCccceeEEEEEEcccccccCCcCCCCC-ccCCCEEE-EEC--CC--
Confidence 566676763 23445555566789999 99999998653321 11110000 011 01121111 011 11
Q ss_pred CCCCCCCCccccccccCCCCeEEEEEcc---cccccc---------------------cccCCEEEEeeeeCCCCeEEEE
Q 007558 378 PLSPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR---------------------YRVGDILLVTGYYNSAPQFRFV 433 (598)
Q Consensus 378 ~~~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R---------------------Yr~GDvV~v~gf~~~~P~i~f~ 433 (598)
...|..|..|||+|+. ..||+. |||||+++.+. ...|+|+
T Consensus 4058 ------------~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~----dG~l~~~ 4121 (4334)
T PRK05691 4058 ------------LELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRS----DGVLEYV 4121 (4334)
T ss_pred ------------CCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecC----CCcEEEe
Confidence 1235679999999964 356653 99999999983 6789999
Q ss_pred eecCceecccccccCHHHHHHHHHHH
Q 007558 434 KRKNVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 434 gR~~~~l~~~GEki~e~~v~~av~~a 459 (598)
||.++.++++|.+|...|||.+|.+.
T Consensus 4122 GR~d~qvki~G~riel~eIE~~l~~~ 4147 (4334)
T PRK05691 4122 GRIDHQVKIRGYRIELGEIEARLHEQ 4147 (4334)
T ss_pred cccCCcEEeceEEecHHHHHHHHHhC
Confidence 99999999999999999999998763
No 109
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=98.99 E-value=7.7e-08 Score=109.95 Aligned_cols=64 Identities=19% Similarity=0.217 Sum_probs=54.3
Q ss_pred cccCCCCeEEEEEcc---ccccc--------------------------------ccccCCEEEEeeeeCCCCeEEEEee
Q 007558 391 AHVQVGKQYELVVTT---YAGLN--------------------------------RYRVGDILLVTGYYNSAPQFRFVKR 435 (598)
Q Consensus 391 ~eve~G~~yelvvTt---~~GL~--------------------------------RYr~GDvV~v~gf~~~~P~i~f~gR 435 (598)
.++.+|+.|||+|.. ..||| -|+|||++++. ...+.|+||
T Consensus 422 ~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-----dG~l~i~GR 496 (612)
T PRK12476 422 AELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-----DGELYITGR 496 (612)
T ss_pred cCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-----CCEEEEEec
Confidence 456789999999964 35665 48999999764 467999999
Q ss_pred cCceecccccccCHHHHHHHHHHH
Q 007558 436 KNVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 436 ~~~~l~~~GEki~e~~v~~av~~a 459 (598)
.+|+|+++|++|++.+||++|.+.
T Consensus 497 ~~d~I~~~G~~I~p~eIE~~l~~~ 520 (612)
T PRK12476 497 IADLIVIDGRNHYPQDIEATVAEA 520 (612)
T ss_pred cCcEEEECCcccCHHHHHHHHHHh
Confidence 999999999999999999999764
No 110
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.99 E-value=1.4e-08 Score=124.14 Aligned_cols=124 Identities=18% Similarity=0.210 Sum_probs=81.7
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCC--CCCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPM--CKPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~--~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++.+.+||. ...++.+++.+ +++++ +.||+||+...+...+. ..+...+. ..|+.
T Consensus 909 lr~v~~gg~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~~g~----------------- 968 (1140)
T PRK06814 909 LRYVFAGAEKVKEETRQTWMEKF-GIRIL-EGYGVTETAPVIALNTPMHNKAGTVGR-LLPGI----------------- 968 (1140)
T ss_pred eeEEEEcCCcCCHHHHHHHHHHh-CCcEE-eccccccccceEEecCCCCCCCCcCCc-cCCCC-----------------
Confidence 778888874 35566677777 78888 99999997433211111 00000111 01111
Q ss_pred CCCCccccccccCCCCeEEEEEcc---ccccc--------------ccccCCEEEEeeeeCCCCeEEEEeecCceecccc
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLN--------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDS 444 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 444 (598)
+.+.++.. ..|+.|||.+.. ..|+| .|+|||+++++. ...+.|+||.+|+++++|
T Consensus 969 --~~~~~~~~--~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d~i~~~G 1040 (1140)
T PRK06814 969 --EYRLEPVP--GIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDE----EGFITIKGRAKRFAKIAG 1040 (1140)
T ss_pred --eEEEeecC--CCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECC----CCeEEEEecccCeeeeCC
Confidence 00111111 136778999854 34554 499999999984 678999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDN 458 (598)
Q Consensus 445 Eki~e~~v~~av~~ 458 (598)
+++++.|||+++.+
T Consensus 1041 ~~v~~~eIE~~l~~ 1054 (1140)
T PRK06814 1041 EMISLAAVEELAAE 1054 (1140)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999976
No 111
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=98.97 E-value=5.7e-09 Score=112.60 Aligned_cols=115 Identities=18% Similarity=0.313 Sum_probs=75.7
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-ccccCC-CCC--CCCCCceeeecCCeEEEeecCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-FGLNMK-PMC--KPSEVSYTIMPNMGYFEFLPHDPNSPPL 379 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~-~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~ 379 (598)
++.+++||. ....+++++.++.++++ +.||+||+. +++... ..+ .+... ....| ..-++.+++++.
T Consensus 279 lr~v~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~-G~~~~-~~~~~ivd~~~~---- 351 (417)
T PF00501_consen 279 LRTVISGGEPLPPDLLRRLRKAFGNAPII-NLYGSTETGSIATIRPPEDDIEKPGSV-GKPLP-GVEVKIVDPNTG---- 351 (417)
T ss_dssp -SEEEEESST-CHHHHHHHHHHHTTSEEE-EEEEEGGGSSEEEEEETTTHHSSTTSE-BEEST-TEEEEEECTTTS----
T ss_pred ccccccccccCChhhccccccccccccce-ecccccccceeeecccccccccccccc-ccccc-cccccccccccc----
Confidence 555544542 46678888988555888 999999974 333110 111 11112 22334 445667765432
Q ss_pred CCCCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecc
Q 007558 380 SPESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI 442 (598)
Q Consensus 380 ~~~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 442 (598)
..+++|+.|||+|+. ..|+|+ |+|||+++++. ...|.|+||.+|+|++
T Consensus 352 -----------~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~----~G~~~~~GR~~~~i~~ 416 (417)
T PF00501_consen 352 -----------EPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDE----DGYLYILGRSDDMIKV 416 (417)
T ss_dssp -----------SBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEET----TSEEEEEEEGSCEEEE
T ss_pred -----------ccccccccccccccCCccceeeeccccccccccccccceecceEEEECC----CCeEEEEEeeCCEEEe
Confidence 134689999999974 456666 99999999983 5799999999999986
Q ss_pred c
Q 007558 443 D 443 (598)
Q Consensus 443 ~ 443 (598)
.
T Consensus 417 ~ 417 (417)
T PF00501_consen 417 R 417 (417)
T ss_dssp T
T ss_pred C
Confidence 3
No 112
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=98.96 E-value=2.1e-08 Score=108.77 Aligned_cols=59 Identities=17% Similarity=0.223 Sum_probs=51.0
Q ss_pred CCeEEEEEccc---ccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 396 GKQYELVVTTY---AGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 396 G~~yelvvTt~---~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
++.+||++++. .|||+ |+|||+++++. ...+.|.||.+|++++.|++++..+||+++.+
T Consensus 290 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 364 (436)
T TIGR01923 290 EGHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDG----EGFLYVLGRRDDLIISGGENIYPEEIETVLYQ 364 (436)
T ss_pred CCceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcC----CCCEEEeccccCeEEeCCEeeCHHHHHHHHHh
Confidence 36789999863 45665 89999999984 57899999999999999999999999999965
No 113
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.95 E-value=1.7e-07 Score=99.60 Aligned_cols=44 Identities=9% Similarity=0.107 Sum_probs=39.7
Q ss_pred ccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHH
Q 007558 411 RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 411 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a 459 (598)
+|+|||++++. ...+.|+||.+|+++++|++|++.+||.+|.+.
T Consensus 235 ~~~TGDl~~~~-----~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 278 (358)
T PRK07824 235 WFRTDDLGALD-----DGVLTVLGRADDAISTGGLTVLPQVVEAALATH 278 (358)
T ss_pred ceecccEEEEe-----CCEEEEEeccCCeEEECCEEECHHHHHHHHHhC
Confidence 79999999983 458899999999999999999999999999763
No 114
>PRK07798 acyl-CoA synthetase; Validated
Probab=98.95 E-value=4e-08 Score=109.28 Aligned_cols=130 Identities=16% Similarity=0.058 Sum_probs=83.1
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeecccccccccc-ccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECF-FGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPE 382 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~ 382 (598)
++.+++||. ......+++.+++++++ +.||+||.. ++......++....+-...+.. -.+.++.+.
T Consensus 298 l~~i~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~~-------- 367 (533)
T PRK07798 298 LFAIASGGALFSPSVKEALLELLPNVVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTIGP-RTVVLDEDG-------- 367 (533)
T ss_pred eEEEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccccccCCCCCCccCCCCccCCCc-eEEEECCCC--------
Confidence 788888874 45566777777788888 999999963 2321111111111110111222 233443221
Q ss_pred CCCccccccccCCCCe--EEEEEccc--ccc-----------------cccccCCEEEEeeeeCCCCeEEEEeecCceec
Q 007558 383 SPPRLVDLAHVQVGKQ--YELVVTTY--AGL-----------------NRYRVGDILLVTGYYNSAPQFRFVKRKNVLLS 441 (598)
Q Consensus 383 ~~~~~v~~~eve~G~~--yelvvTt~--~GL-----------------~RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 441 (598)
..+.+|+. ++++.+.. .|+ .-|+|||+++++. ...+.|.||.+++++
T Consensus 368 --------~~~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~~~~i~ 435 (533)
T PRK07798 368 --------NPVEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA----DGTITLLGRGSVCIN 435 (533)
T ss_pred --------CCCCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC----CCcEEEEccccceEe
Confidence 12345665 77776532 222 2368999999983 668999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007558 442 IDSDKTDEAELQKGIDN 458 (598)
Q Consensus 442 ~~GEki~e~~v~~av~~ 458 (598)
.+|++|++.+||.++.+
T Consensus 436 ~~G~~v~~~eIE~~l~~ 452 (533)
T PRK07798 436 TGGEKVFPEEVEEALKA 452 (533)
T ss_pred cCCEEeCHHHHHHHHHh
Confidence 99999999999999865
No 115
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.95 E-value=1.6e-08 Score=113.54 Aligned_cols=58 Identities=10% Similarity=0.132 Sum_probs=49.4
Q ss_pred CeEEEEEccc---ccccc----------cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 397 KQYELVVTTY---AGLNR----------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 397 ~~yelvvTt~---~GL~R----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
+.+||+++.. .|+|. |+|||+++.+. ...+.|+||.+|++++.|+|+++.+||.++..
T Consensus 383 ~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~----dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 453 (539)
T PRK07008 383 AFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDA----DGFMQITDRSKDVIKSGGEWISSIDIENVAVA 453 (539)
T ss_pred cceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcC----CCcEEEeecccCEEEeCCeEEcHHHHHHHHHh
Confidence 4689999752 45543 99999999974 56899999999999999999999999999965
No 116
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=98.92 E-value=2.9e-08 Score=113.58 Aligned_cols=63 Identities=17% Similarity=0.148 Sum_probs=45.4
Q ss_pred CCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceec-ccccccC--HHHHHHH
Q 007558 396 GKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLS-IDSDKTD--EAELQKG 455 (598)
Q Consensus 396 G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~-~~GEki~--e~~v~~a 455 (598)
|..+||+|.. +.|||. |+|||++++++-......+.|+||.+|+++ .+|+|++ +.|++.+
T Consensus 409 ~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~ 488 (614)
T PRK08180 409 GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAV 488 (614)
T ss_pred CCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHH
Confidence 5568999953 467663 899999999520012457899999988776 5799776 7788777
Q ss_pred HHH
Q 007558 456 IDN 458 (598)
Q Consensus 456 v~~ 458 (598)
+..
T Consensus 489 l~~ 491 (614)
T PRK08180 489 SAG 491 (614)
T ss_pred hhc
Confidence 644
No 117
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=98.91 E-value=2.4e-08 Score=112.63 Aligned_cols=132 Identities=14% Similarity=0.259 Sum_probs=92.7
Q ss_pred eEEEEeCchh--hhHHHHHhhcCCCCeeccccccccccccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCCCCC
Q 007558 307 LDVIVTGAMA--QYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESP 384 (598)
Q Consensus 307 l~~~~~g~~~--~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~ 384 (598)
++..++||+. +-...+=+-. |+++. .+||.||...+++.++ +. + |.+ +..+
T Consensus 355 i~~~~sGGa~l~~~~~~f~~~l-Gi~i~-eGYGlTEts~~~~v~~---~~----------~---~~~-gtvG-------- 407 (613)
T COG1022 355 IRYALSGGAPLSPELLHFFRSL-GIPIL-EGYGLTETSAVVSVNP---PD----------R---FVL-GTVG-------- 407 (613)
T ss_pred EEEEEecCCcCCHHHHHHHHHc-CCCeE-EEecccccccceEEcc---cc----------C---ccc-CCcC--------
Confidence 6777888863 2222222334 69999 9999999654443222 11 1 111 2112
Q ss_pred CccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceec-ccccc
Q 007558 385 PRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLS-IDSDK 446 (598)
Q Consensus 385 ~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~-~~GEk 446 (598)
.+++..|++.++.|||.|.+ +.|||. |+|||++.++. ...+.++||+|+++. .+||+
T Consensus 408 -~p~p~~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~----~g~L~i~gRkK~~i~l~~Gkn 482 (613)
T COG1022 408 -KPLPGIEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDE----DGYLVITGRKKELIKLSNGKN 482 (613)
T ss_pred -CcCCCceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcC----CCcEEEeecccceEECCCCcc
Confidence 36667788999999999965 589999 99999999994 589999999999955 56999
Q ss_pred cCHHHHHHHHHHHHHHhhhcCCeEEeEEEeec
Q 007558 447 TDEAELQKGIDNASLLLKEFNASVIEYTSYAD 478 (598)
Q Consensus 447 i~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d 478 (598)
|.++.||..+.+ .--|...+++.+
T Consensus 483 IaP~~IE~~l~~--------~~~I~qi~vvg~ 506 (613)
T COG1022 483 IAPEPIESKLAK--------SPLIEQICVVGD 506 (613)
T ss_pred cChHHHHHHHhc--------CCCeeEEEEEec
Confidence 999999997754 234556666664
No 118
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=98.90 E-value=3.8e-08 Score=114.49 Aligned_cols=129 Identities=12% Similarity=0.181 Sum_probs=81.2
Q ss_pred eEEEEeCch---hhhHHHHHhhcCCCCeeccccccccccccccCCCCC--CCCCCceeeecCCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM---AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMC--KPSEVSYTIMPNMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 381 (598)
++.+++||. ....+.++..+ + +++ ++||.||+.......... .+...+. ..++..+ -.++.++..
T Consensus 430 lr~i~~GGa~l~~~~~~~~~~~~-~-~l~-~~YG~TEt~~~~~~~~~~~~~~~svG~-p~~g~ev-kI~d~~~~~----- 499 (700)
T PTZ00216 430 VRAMLSGGGPLSAATQEFVNVVF-G-MVI-QGWGLTETVCCGGIQRTGDLEPNAVGQ-LLKGVEM-KLLDTEEYK----- 499 (700)
T ss_pred EEEEEECCCCCCHHHHHHHHHHh-h-hHh-hccCcccccccccccCCCCCCCCCcCC-cCCCeEE-EEeechhhc-----
Confidence 788888884 23334455555 5 788 999999974321111110 0111111 1222211 112221110
Q ss_pred CCCCccccccccCCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceec-cc
Q 007558 382 ESPPRLVDLAHVQVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLS-ID 443 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~-~~ 443 (598)
..+.+|..|||+|.. +.|||+ |+|||+++++. ...+.|+||.+|+++ ..
T Consensus 500 ---------~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~----dG~l~i~GR~kd~ik~~~ 566 (700)
T PTZ00216 500 ---------HTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAA----NGTLRIIGRVKALAKNCL 566 (700)
T ss_pred ---------cCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcC----CCcEEEEEehHhheecCC
Confidence 012456678999954 467774 99999999984 678999999999986 89
Q ss_pred ccccCHHHHHHHHHH
Q 007558 444 SDKTDEAELQKGIDN 458 (598)
Q Consensus 444 GEki~e~~v~~av~~ 458 (598)
||+|.+.+||.++.+
T Consensus 567 G~~I~p~eIE~~l~~ 581 (700)
T PTZ00216 567 GEYIALEALEALYGQ 581 (700)
T ss_pred CceeccHHHHHHHhc
Confidence 999999999999976
No 119
>PRK12582 acyl-CoA synthetase; Provisional
Probab=98.86 E-value=3.1e-08 Score=113.57 Aligned_cols=60 Identities=22% Similarity=0.316 Sum_probs=46.6
Q ss_pred CCCCeEEEEEcc---cccccc--------------cccCCEEEEeeeeCCCCeEEEEeecCceecc-cccccCHHHHH
Q 007558 394 QVGKQYELVVTT---YAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI-DSDKTDEAELQ 453 (598)
Q Consensus 394 e~G~~yelvvTt---~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~GEki~e~~v~ 453 (598)
..|+.|||+|.. ..|||. |+|||++++.+-......+.|+||.+|++++ +|+||.+.++|
T Consensus 419 ~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE 496 (624)
T PRK12582 419 PVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLR 496 (624)
T ss_pred cCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHH
Confidence 468899999954 467774 9999999984211124579999999998885 79999988885
No 120
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=98.81 E-value=3.3e-07 Score=103.00 Aligned_cols=58 Identities=16% Similarity=0.180 Sum_probs=49.6
Q ss_pred CeEEEEEcc---cccccc-----------cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 397 KQYELVVTT---YAGLNR-----------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 397 ~~yelvvTt---~~GL~R-----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
..+||++.. ..|+|. |+|||+++++. ...+.|+||.+++++++|+++++.+||.++.+
T Consensus 383 ~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 454 (542)
T PRK06018 383 TFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDA----YGYMRITDRSKDVIKSGGEWISSIDLENLAVG 454 (542)
T ss_pred ceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcC----CccEEEEecCCCeEEECCEEECHHHHHHHHHh
Confidence 578999963 356765 99999999873 56899999999999999999999999999965
No 121
>PLN02479 acetate-CoA ligase
Probab=98.80 E-value=3e-07 Score=104.02 Aligned_cols=58 Identities=12% Similarity=0.173 Sum_probs=50.3
Q ss_pred CeEEEEEcc---ccccc-------------ccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 397 KQYELVVTT---YAGLN-------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 397 ~~yelvvTt---~~GL~-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
+.|||+++. ..||| .|+|||+++++. ...+.|+||.+|++++.|+++++.+||.++.+
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 474 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHP----DGYIEIKDRSKDIIISGGENISSLEVENVVYT 474 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcC----CccEEEeccccceEEeCCEEEcHHHHHHHHHh
Confidence 579999975 35666 399999999873 57899999999999999999999999999965
No 122
>PRK08162 acyl-CoA synthetase; Validated
Probab=98.79 E-value=4e-07 Score=102.14 Aligned_cols=58 Identities=10% Similarity=0.229 Sum_probs=50.3
Q ss_pred CeEEEEEcc---cccccc-------------cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 397 KQYELVVTT---YAGLNR-------------YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 397 ~~yelvvTt---~~GL~R-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
+.|||+|+. ..|+|. |+|||+++++. ...+.|+||.++++++.|+++++.+||.+|.+
T Consensus 387 ~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~----dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~ 460 (545)
T PRK08162 387 TIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHP----DGYIKIKDRSKDIIISGGENISSIEVEDVLYR 460 (545)
T ss_pred ceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcC----CccEEEEecccceEEeCCEEECHHHHHHHHHh
Confidence 369999975 356654 99999999984 57899999999999999999999999999975
No 123
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=98.79 E-value=6e-08 Score=108.80 Aligned_cols=135 Identities=15% Similarity=0.210 Sum_probs=90.2
Q ss_pred cccCCCCceeEEEEeCchh---hhHHHHHhhcCCCCeeccccccccccccccCC-CCCC-CCCCceeeecCCeEEEeecC
Q 007558 298 TRIWPNTKYLDVIVTGAMA---QYIPTLDHYSGGLPLACTMYASSECFFGLNMK-PMCK-PSEVSYTIMPNMGYFEFLPH 372 (598)
Q Consensus 298 ~~lWP~l~~l~~~~~g~~~---~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~~-~~~~~~~l~~~~~ffEFip~ 372 (598)
..||++ ++.+++|++. ....=++-.+ ||+|+ ++||.||+.-|.... +.+. ....|. .+|.. -+=++++
T Consensus 415 ~~LGg~---vr~~~sGaAPls~ev~~F~r~~~-g~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG~-p~p~~-~vKL~dv 487 (691)
T KOG1256|consen 415 QSLGGN---VRLIISGAAPLSPEVLTFFRAAL-GCRVL-EGYGLTETSAGTTLTLPGDNVLGSVGP-PVPGN-EVKLVDV 487 (691)
T ss_pred HHhcCc---eeEEEecCCCCCHHHHHHHHHhc-Cceee-ecccccccCCceEeccCCCCCCCCcCC-cccCc-eEEEech
Confidence 357788 8999999852 3223333444 89999 999999986433221 1111 111111 12221 1222232
Q ss_pred CCCCCCCCCCCCCccccccccCCCCeEEEEE---cccccccc--------------cccCCEEEEeeeeCCCCeEEEEee
Q 007558 373 DPNSPPLSPESPPRLVDLAHVQVGKQYELVV---TTYAGLNR--------------YRVGDILLVTGYYNSAPQFRFVKR 435 (598)
Q Consensus 373 ~~~~~~~~~~~~~~~v~~~eve~G~~yelvv---Tt~~GL~R--------------Yr~GDvV~v~gf~~~~P~i~f~gR 435 (598)
.+.+ --..|..|||.| +-+.|||. .+|||+.+++. ...+.++||
T Consensus 488 pe~n---------------y~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p----~G~l~IidR 548 (691)
T KOG1256|consen 488 PEMN---------------YDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDP----NGTLKIIDR 548 (691)
T ss_pred HHhC---------------cCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECC----CccEEEEec
Confidence 2221 123566899999 35799998 99999999995 889999999
Q ss_pred cCceeccc-ccccCHHHHHHHHHH
Q 007558 436 KNVLLSID-SDKTDEAELQKGIDN 458 (598)
Q Consensus 436 ~~~~l~~~-GEki~e~~v~~av~~ 458 (598)
+|+++++. ||.|.+..||++..+
T Consensus 549 kK~ifklaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 549 KKNIFKLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred ccceEEcCCCCccChHHHHHHHhc
Confidence 99998776 899999999999976
No 124
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.66 E-value=6.3e-07 Score=98.40 Aligned_cols=43 Identities=12% Similarity=0.142 Sum_probs=39.4
Q ss_pred ccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 411 RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 411 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
.|+|||+++++ ...+.|.||.+|++++.|+++++.+||++|.+
T Consensus 333 ~~~TGD~~~~~-----~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~ 375 (458)
T PRK09029 333 WFATRDRGEWQ-----NGELTILGRLDNLFFSGGEGIQPEEIERVINQ 375 (458)
T ss_pred ccCCCCcEEEe-----CCEEEEecccccceeeCCEEeCHHHHHHHHhc
Confidence 38999999987 35799999999999999999999999999976
No 125
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.59 E-value=9.8e-07 Score=106.56 Aligned_cols=139 Identities=12% Similarity=0.125 Sum_probs=88.5
Q ss_pred eeEEEEeCch-hhhHHHHHhhcCCCCeeccccccccccccccCCCCCCCCCCceeeecCCeEEEeecCCCCCCCCCCCCC
Q 007558 306 YLDVIVTGAM-AQYIPTLDHYSGGLPLACTMYASSECFFGLNMKPMCKPSEVSYTIMPNMGYFEFLPHDPNSPPLSPESP 384 (598)
Q Consensus 306 ~l~~~~~g~~-~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~ 384 (598)
.++.+++|++ ....+++.+.+++++++ +.||+||+.+.+...+...+...+. ..|+..-++..+.+....
T Consensus 721 slr~~~g~gl~~~l~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~svG~-p~pg~~~v~i~~~d~~~g------- 791 (994)
T PRK07868 721 PVRLFIGSGMPTGLWERVVEAFAPAHVV-EFFATTDGQAVLANVSGAKIGSKGR-PLPGAGRVELAAYDPEHD------- 791 (994)
T ss_pred ceEEEecCCCCHHHHHHHHHHhCchhee-eeeecccccccccccCCCCCcccCC-ccCCCCceeEEEecCcCC-------
Confidence 3677666665 35667788888778998 9999999853221101111111222 223321122221111000
Q ss_pred Cc-cccc----cccCCCCeEEEEEccc----------ccccc-----cccCCEEEEeeeeCCCCeEEEEeecCceecccc
Q 007558 385 PR-LVDL----AHVQVGKQYELVVTTY----------AGLNR-----YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDS 444 (598)
Q Consensus 385 ~~-~v~~----~eve~G~~yelvvTt~----------~GL~R-----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 444 (598)
+ .++. .++++|+.|||++... .|+++ |+|||+++++ ....+.|+||.+++|++.|
T Consensus 792 -~li~d~~G~~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d----~dG~l~~~GR~dd~Ik~~G 866 (994)
T PRK07868 792 -LILEDDRGFVRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRD----DDGDYWLVDRRGSVIRTAR 866 (994)
T ss_pred -ceeecCCceEEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEc----CCCCEEEeccCCCEEEeCC
Confidence 1 1111 2467899999998642 23343 8899999998 4778999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007558 445 DKTDEAELQKGIDN 458 (598)
Q Consensus 445 Eki~e~~v~~av~~ 458 (598)
++|++.|||++|.+
T Consensus 867 ~~I~p~EIE~~L~~ 880 (994)
T PRK07868 867 GPVYTEPVTDALGR 880 (994)
T ss_pred ceEcHHHHHHHHhc
Confidence 99999999999976
No 126
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=98.52 E-value=1.6e-06 Score=93.92 Aligned_cols=43 Identities=14% Similarity=0.236 Sum_probs=39.8
Q ss_pred cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHH
Q 007558 412 YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDN 458 (598)
Q Consensus 412 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~ 458 (598)
|+|||+++++. ...+.|+||.++++++.|+||++.+||+++.+
T Consensus 277 ~~tgD~g~~d~----~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~ 319 (386)
T TIGR02372 277 LDLQDRLAWDK----DGGFTILGRKDEILQVGGVNVSPGHVRDILER 319 (386)
T ss_pred eecCceEEEcC----CCcEEEecccCCEEEECCEEEcHHHHHHHHHc
Confidence 78999999874 68999999999999999999999999999976
No 127
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.23 E-value=0.00017 Score=78.93 Aligned_cols=143 Identities=15% Similarity=0.219 Sum_probs=90.7
Q ss_pred eEEEEeCch--hhhHHHHHhhcCCCCeeccccccccccc-cccCCCCCCCCCCceeee-c-CCeEEEeecCCCCCCCCCC
Q 007558 307 LDVIVTGAM--AQYIPTLDHYSGGLPLACTMYASSECFF-GLNMKPMCKPSEVSYTIM-P-NMGYFEFLPHDPNSPPLSP 381 (598)
Q Consensus 307 l~~~~~g~~--~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~~~~~~~~~l~-~-~~~ffEFip~~~~~~~~~~ 381 (598)
|+-+++||+ .+-.+++-..+=.||+. .+||-||..- +.-.++.+.. .+ .+- | ..+.+-.++.++.+=
T Consensus 404 lR~~LsGGapLS~dtQrF~nic~C~Pv~-qGYGLTEtca~~tv~e~~d~~--~g-~vG~pl~c~eiKLvdw~EgGY---- 475 (678)
T KOG1180|consen 404 LRYILSGGAPLSPDTQRFMNICFCCPVL-QGYGLTETCAAATVLEPEDFS--TG-RVGAPLPCCEIKLVDWEEGGY---- 475 (678)
T ss_pred eEEEEeCCCCCCHHHHHHHHHhcccccc-ccccccchhcccEecChhhcc--cc-cccCCccceEEEEEEhhhcCc----
Confidence 678888985 34345554433257999 9999999643 3333333221 11 111 1 223444444443320
Q ss_pred CCCCccccccccCCCC--eEEEEEcc---cccccc-----------------cccCCEEEEeeeeCCCCeEEEEeecCce
Q 007558 382 ESPPRLVDLAHVQVGK--QYELVVTT---YAGLNR-----------------YRVGDILLVTGYYNSAPQFRFVKRKNVL 439 (598)
Q Consensus 382 ~~~~~~v~~~eve~G~--~yelvvTt---~~GL~R-----------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~ 439 (598)
. ..+. +|||+|+- ..|||. |+||||.+++ ...+++++.|++|+
T Consensus 476 --~---------~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~----pdG~LkIIDRKKdL 540 (678)
T KOG1180|consen 476 --F---------AKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFH----PDGCLKIIDRKKDL 540 (678)
T ss_pred --c---------CCCCCCCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceec----CCCcEEEeechhhh
Confidence 0 0111 57899863 367766 9999999998 47899999999999
Q ss_pred ecc-cccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEeecCC
Q 007558 440 LSI-DSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYADTT 480 (598)
Q Consensus 440 l~~-~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~ 480 (598)
+.+ +||-|+=.-||.++.. +--|.+-+|++|..
T Consensus 541 VKlq~GEYIsL~KvEa~l~s--------~p~V~NICvyAd~~ 574 (678)
T KOG1180|consen 541 VKLQNGEYISLGKVEAALRS--------SPYVDNICVYADSN 574 (678)
T ss_pred hhhcccceeehHHHHHHHhc--------CcchhheEEecccc
Confidence 764 6999999999988854 22344677888853
No 128
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.10 E-value=0.00017 Score=77.40 Aligned_cols=79 Identities=16% Similarity=0.298 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHh-cCCChhhHhc----CCCCCCCHHHHhhcCCCcccccchHHHHHHHcCCCcccc--cCCccceeec
Q 007558 34 DPVQERVLAAILSR-NGETEYLRRF----NLDGATDRDTFKSKVPVVTYEDLQPEIQRIANGDRSAIL--SSHPVSEFLT 106 (598)
Q Consensus 34 ~~~Q~~~L~~iL~~-~~~T~ygr~~----gf~~i~s~edf~~~vPl~~Yed~~p~ier~~~Ge~~~ll--~~~pi~~f~~ 106 (598)
++...+.++++.+. .++++.||++ |++ .+++++. .+|..--+-++.. .|+ +.+.+.....
T Consensus 30 ~~l~~~~~~~~~~~q~~~~~~Yr~~~~~~~~~--~~v~~~~-dIP~lPi~~FK~~----------~L~S~~~e~~~~~~t 96 (365)
T PF04443_consen 30 EELFLALALELFRYQYEHNPPYRKYCDALGFD--EDVKDLE-DIPFLPIRFFKEH----------ELLSVPEEEVEKVFT 96 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCC--cccccHH-HCCcchHHHHhhc----------eeeecChhhheeEEE
Confidence 34455566666664 5899999986 665 5556663 5777766666632 233 2345667899
Q ss_pred ccccCCCCcccccCChHHHH
Q 007558 107 SSGTSAGERKLMPTIHEELD 126 (598)
Q Consensus 107 TSGTT~G~~K~IP~T~~~~~ 126 (598)
||||| |.+-.|...+....
T Consensus 97 SSGTt-G~~S~i~~D~~t~~ 115 (365)
T PF04443_consen 97 SSGTT-GQPSRIFRDRETAE 115 (365)
T ss_pred CCCCC-CCCcEEEECHHHHH
Confidence 99999 77777777766544
No 129
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=97.68 E-value=0.00092 Score=73.52 Aligned_cols=232 Identities=16% Similarity=0.180 Sum_probs=133.2
Q ss_pred eEEEEeCch-hhhHHHHHhhcCCCCeecccccccccccc-ccCCCCCCCCCCcee-e-ecCCeEEEeecCCCCCCCCCCC
Q 007558 307 LDVIVTGAM-AQYIPTLDHYSGGLPLACTMYASSECFFG-LNMKPMCKPSEVSYT-I-MPNMGYFEFLPHDPNSPPLSPE 382 (598)
Q Consensus 307 l~~~~~g~~-~~y~~~l~~~~~g~~v~~~~ygaSEg~~~-i~~~~~~~~~~~~~~-l-~~~~~ffEFip~~~~~~~~~~~ 382 (598)
++....-|. .+..+++.+.| |.+...+.||||||.++ +|.+...- ..+.. . .....=|+.|-.|....++-.
T Consensus 359 VRla~GNGLR~diW~~Fv~RF-g~~~IgE~YgaTEgn~~~~N~d~~vG--A~G~~~~~~~~l~p~~LIk~D~~t~E~iR- 434 (649)
T KOG1179|consen 359 VRLAYGNGLRPDIWQQFVKRF-GIIKIGEFYGATEGNSNLVNYDGRVG--ACGFMSRLLKLLYPFRLIKVDPETGEPIR- 434 (649)
T ss_pred EEEEecCCCCchHHHHHHHHc-CCCeEEEEeccccCcceeeeecCccc--cccchhhhhhhccceEEEEecCCCCceee-
Confidence 555554443 46678888889 66655599999999764 44443221 01110 1 011112556655543221000
Q ss_pred CCCccccccccCCCCeEEEEEc--------cccc-----------ccc---------cccCCEEEEeeeeCCCCeEEEEe
Q 007558 383 SPPRLVDLAHVQVGKQYELVVT--------TYAG-----------LNR---------YRVGDILLVTGYYNSAPQFRFVK 434 (598)
Q Consensus 383 ~~~~~v~~~eve~G~~yelvvT--------t~~G-----------L~R---------Yr~GDvV~v~gf~~~~P~i~f~g 434 (598)
.+.-+ ...+++||.|.||-. .+.| ++| |++||++..+. -..+.|..
T Consensus 435 -d~~G~-Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~----~GylYF~D 508 (649)
T KOG1179|consen 435 -DSQGL-CIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADE----LGYLYFKD 508 (649)
T ss_pred -cCCce-EEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEec----CCcEEEec
Confidence 00111 135678999966642 2334 333 99999999984 77999999
Q ss_pred ecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEe-ecCCCCCceEEEEEEEeecccCCCCChHHHHHHHHHH
Q 007558 435 RKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSY-ADTTTIPGHYVIFWELLVKDAANSPSDEVLNQCCLVV 513 (598)
Q Consensus 435 R~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~-~d~~~~p~~Y~l~~E~e~~~~~~~~~~~~l~~~~~~l 513 (598)
|.+|..--.|||++-.|||+.+..... + .++.-|-|. +..+++-|-=.|. .+ + ...-+++++-..+
T Consensus 509 RtGDTFRWKGENVsTtEVe~~l~~~~~-~----~dv~VYGV~VP~~EGRaGMAaI~--~~--p----~~~~d~~~l~~~l 575 (649)
T KOG1179|consen 509 RTGDTFRWKGENVSTTEVEDVLSALDF-L----QDVNVYGVTVPGYEGRAGMAAIV--LD--P----TTEKDLEKLYQHL 575 (649)
T ss_pred cCCCceeecCCcccHHHHHHHHhhhcc-c----cceeEEEEecCCccCccceEEEE--ec--C----cccchHHHHHHHH
Confidence 999999999999999999998876421 2 123334432 3333333322222 11 1 1122444455555
Q ss_pred HHHhChhhHhccccCCccCCeEEEEeCCChHHHHHHHHHhcCCCCCCCCCCccc
Q 007558 514 EESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCV 567 (598)
Q Consensus 514 d~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtF~~~~~~~~~~G~~~~Q~K~Pr~~ 567 (598)
.+.| +.|+.=|. . +|- =.+=.-|||....-.+++.|-..++++-|--+
T Consensus 576 ~~~L-P~YA~P~F-l-Rl~---~~i~~TgTFKl~K~~L~~egf~p~~~~dply~ 623 (649)
T KOG1179|consen 576 RENL-PSYARPRF-L-RLQ---DEIEKTGTFKLQKTELQKEGFNPAIISDPLYY 623 (649)
T ss_pred HhhC-ccccchHH-H-HHH---hhhhcccchhhHHHHHHHccCCccccCCceEE
Confidence 5555 66665441 1 121 12335699996666666779899999888753
No 130
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.71 E-value=0.064 Score=61.64 Aligned_cols=63 Identities=19% Similarity=0.333 Sum_probs=50.1
Q ss_pred ccCCCCeEEEEEccc---cccc--------------ccccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHH
Q 007558 392 HVQVGKQYELVVTTY---AGLN--------------RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQK 454 (598)
Q Consensus 392 eve~G~~yelvvTt~---~GL~--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~ 454 (598)
.+..|..+|+.|+-. .|++ -|+|||+++.. ....++|+||.+..+++.|..|-..+|+.
T Consensus 561 ~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~----~dg~~e~lgr~D~qvki~g~Riel~eie~ 636 (642)
T COG1020 561 PLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPL----ADGALEYLGRKDSQVKIRGFRIELGEIEA 636 (642)
T ss_pred cCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeEC----CCCeEEEeccccceeEeceEecCcHHHHH
Confidence 445687889999743 3322 39999999943 57799999999999999999999999988
Q ss_pred HHHH
Q 007558 455 GIDN 458 (598)
Q Consensus 455 av~~ 458 (598)
++..
T Consensus 637 ~l~~ 640 (642)
T COG1020 637 ALAE 640 (642)
T ss_pred HHhc
Confidence 8753
No 131
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=95.54 E-value=0.026 Score=48.67 Aligned_cols=84 Identities=17% Similarity=0.125 Sum_probs=50.3
Q ss_pred ccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEeecCCCCCceEEEEEEEeecccCCCCChHHHHHHHHHHHHHhChhhHh
Q 007558 444 SDKTDEAELQKGIDNASLLLKEFNASVIEYTSYADTTTIPGHYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQ 523 (598)
Q Consensus 444 GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~ 523 (598)
|.+++|.+|+++|.+.. ++. .+|.+..+..+.-.+..+.+|+. +. ...+.+..+.+++.|.++|
T Consensus 1 GvnvfP~~Ie~vl~~~~------~~~-~~y~i~v~~~~~~D~l~v~vE~~--~~-~~~~~~~~~~l~~~i~~~l------ 64 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFP------EVS-PEYQIVVTREGGLDELTVRVELR--PG-FSDDAEDLEALAERIAERL------ 64 (96)
T ss_dssp TEEE-HHHHHHHHCTST------TEE-EEEEEEEEEETTEEEEEEEEEES--TT-CCTTHHHHHHHHHHHHHHH------
T ss_pred CcEECHHHHHHHHHhCc------CCC-CcEEEEEEcCCCCcEEEEEEEEC--Cc-cCcchHHHHHHHHHHHHHH------
Confidence 78999999999997742 211 27877665332333444666664 21 1112356777888888888
Q ss_pred ccccCCccCCeEEEEeCCChHHH
Q 007558 524 GRVADNSIGPLEIRVVKNGTFEE 546 (598)
Q Consensus 524 ~R~~~g~l~p~~v~~v~~gtF~~ 546 (598)
|...| +. ++|++|++|++.+
T Consensus 65 -k~~lg-v~-~~V~lv~~gtLpr 84 (96)
T PF14535_consen 65 -KERLG-VR-PEVELVPPGTLPR 84 (96)
T ss_dssp -HHHHS-S--EEEEEE-TT-S--
T ss_pred -HhhcC-ce-EEEEEECCCCccC
Confidence 65553 55 4999999999997
No 132
>PTZ00297 pantothenate kinase; Provisional
Probab=95.34 E-value=0.43 Score=59.92 Aligned_cols=54 Identities=17% Similarity=0.100 Sum_probs=38.7
Q ss_pred eEEEEEcccccccc--cccCCEEEEeeeeCCCCeEEEEeecCceecc-cccccCHHHHHHHHHH
Q 007558 398 QYELVVTTYAGLNR--YRVGDILLVTGYYNSAPQFRFVKRKNVLLSI-DSDKTDEAELQKGIDN 458 (598)
Q Consensus 398 ~yelvvTt~~GL~R--Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~GEki~e~~v~~av~~ 458 (598)
.|||++. .++ =.|+++ ++|+. ....+.|+||+|+++.. .||+|.++.||+.+..
T Consensus 825 ~GEIlvr----~~kdpe~T~e~--~~gW~-~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~ 881 (1452)
T PTZ00297 825 IGQLVLA----KKGEPRRTLPI--AAQWK-RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQ 881 (1452)
T ss_pred CCeEEEE----ECCChHHHHHh--hCcCc-cCCeEEEEeccccceECCCCcEEcHHHHHHHHhc
Confidence 4788883 121 225553 24553 46799999999999654 5899999999999854
No 133
>PRK09188 serine/threonine protein kinase; Provisional
Probab=89.95 E-value=0.4 Score=51.68 Aligned_cols=39 Identities=13% Similarity=0.182 Sum_probs=32.9
Q ss_pred ccccCCEEEEeeeeCCCCeEEEEeecCceecccc---cccCHHHHHHHHHH
Q 007558 411 RYRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDS---DKTDEAELQKGIDN 458 (598)
Q Consensus 411 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G---Eki~e~~v~~av~~ 458 (598)
-|+|||++++.+ ....+.|+||.+ +| |+|++. ||+++.+
T Consensus 210 W~~TGDlg~~~d---~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~ 251 (365)
T PRK09188 210 WLATGKKVYNFI---TRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKS 251 (365)
T ss_pred EEeCCCEEEEEc---CCCeEEEEecCc-----CCcCceeeCHH-HHHHHHh
Confidence 389999999841 477899999997 78 899999 9998876
No 134
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=56.53 E-value=7.7 Score=47.07 Aligned_cols=44 Identities=16% Similarity=0.155 Sum_probs=40.3
Q ss_pred cccCCEEEEeeeeCCCCeEEEEeecCceecccccccCHHHHHHHHHHH
Q 007558 412 YRVGDILLVTGYYNSAPQFRFVKRKNVLLSIDSDKTDEAELQKGIDNA 459 (598)
Q Consensus 412 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEki~e~~v~~av~~a 459 (598)
|||||.+|.. +..-++|.||.++.+.++|-++.=.++.+++..-
T Consensus 456 y~tgD~gr~l----~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~ 499 (1032)
T KOG1178|consen 456 YRTGDNGRSL----KNGGLEISGRADRQIKDRGVRIELGELNTVVEVH 499 (1032)
T ss_pred ccccccceee----cCCCEEEEEeccceEEEccEEEehhhhchhhccC
Confidence 9999999988 3778999999999999999999999999988764
No 135
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=43.79 E-value=18 Score=31.14 Aligned_cols=37 Identities=22% Similarity=0.478 Sum_probs=27.1
Q ss_pred ccccccCCEEEEe---eeeCCCCeEEEEeecCceeccccc
Q 007558 409 LNRYRVGDILLVT---GYYNSAPQFRFVKRKNVLLSIDSD 445 (598)
Q Consensus 409 L~RYr~GDvV~v~---gf~~~~P~i~f~gR~~~~l~~~GE 445 (598)
|.-|..||.|-++ +++.+.|-=+|.||++.++...|.
T Consensus 30 l~ey~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g~ 69 (98)
T COG2139 30 LQEYKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRGR 69 (98)
T ss_pred HhhccCCCEEEEEeCcccccCCCCccccCcceEEEeccCC
Confidence 5568888888876 455666777888888877766664
No 136
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=38.49 E-value=24 Score=30.66 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=27.1
Q ss_pred ccccccCCEEEEee---eeCCCCeEEEEeecCceeccccc
Q 007558 409 LNRYRVGDILLVTG---YYNSAPQFRFVKRKNVLLSIDSD 445 (598)
Q Consensus 409 L~RYr~GDvV~v~g---f~~~~P~i~f~gR~~~~l~~~GE 445 (598)
|--|+.||.|-+.. ++.+.|.=.|.||++-+.++.|.
T Consensus 32 l~~y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~~ 71 (98)
T PRK04306 32 LQEFEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRGR 71 (98)
T ss_pred HHhccCCCEEEEEecCceecCCccccccCCCEEEEeecCe
Confidence 44589999998874 23456666888998888877764
No 137
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=38.45 E-value=1.9e+02 Score=24.51 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhhhcCCeEEeEEEeecCCCCCceEEEEEEEeecccCCCCChHHHHHHHHHHHHHh
Q 007558 449 EAELQKGIDNASLLLKEFNASVIEYTSYADTTTIPGHYVIFWELLVKDAANSPSDEVLNQCCLVVEESL 517 (598)
Q Consensus 449 e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~L 517 (598)
+..+..++..+. ..|+.+...-..+. ...++.|.+|++++. ..+ +.+..+.+.|.+.+
T Consensus 25 pGsL~~vL~~Fa----~~~INLt~IeSRP~-~~~~~~Y~FfVDieg-----~~~-~~~~~~l~~L~~~~ 82 (90)
T cd04931 25 VGALAKVLRLFE----EKDINLTHIESRPS-RLNKDEYEFFINLDK-----KSA-PALDPIIKSLRNDI 82 (90)
T ss_pred CcHHHHHHHHHH----HCCCCEEEEEeccC-CCCCceEEEEEEEEc-----CCC-HHHHHHHHHHHHHh
Confidence 445666666553 47888877766553 335678999999973 112 23444445555544
No 138
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=37.32 E-value=25 Score=33.17 Aligned_cols=37 Identities=16% Similarity=0.315 Sum_probs=27.3
Q ss_pred ccccccCCEEEEee---eeCCCCeEEEEeecCceeccccc
Q 007558 409 LNRYRVGDILLVTG---YYNSAPQFRFVKRKNVLLSIDSD 445 (598)
Q Consensus 409 L~RYr~GDvV~v~g---f~~~~P~i~f~gR~~~~l~~~GE 445 (598)
|--|+.||+|-+.+ ++.+.|.=.|.||++-+.|+.|.
T Consensus 31 l~~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~~ 70 (160)
T PTZ00189 31 LTTFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTPR 70 (160)
T ss_pred HHHccCCCEEEEEecCCeecCCCcccccCCCeEEEeecCe
Confidence 34488999988875 44556777888888888777664
No 139
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=35.90 E-value=35 Score=26.18 Aligned_cols=19 Identities=16% Similarity=0.690 Sum_probs=15.2
Q ss_pred cccCCEEEEeeeeCCCCeEEEE
Q 007558 412 YRVGDILLVTGYYNSAPQFRFV 433 (598)
Q Consensus 412 Yr~GDvV~v~gf~~~~P~i~f~ 433 (598)
|.+||+|+..+ +.|.+.+.
T Consensus 1 f~~GDvV~LKS---GGp~MTV~ 19 (53)
T PF09926_consen 1 FKIGDVVQLKS---GGPRMTVT 19 (53)
T ss_pred CCCCCEEEEcc---CCCCeEEE
Confidence 68999999995 67877665
No 140
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=33.25 E-value=22 Score=40.20 Aligned_cols=30 Identities=30% Similarity=0.465 Sum_probs=21.1
Q ss_pred CCCCeE----EEEEccccc--ccccccCCEEEEeee
Q 007558 394 QVGKQY----ELVVTTYAG--LNRYRVGDILLVTGY 423 (598)
Q Consensus 394 e~G~~y----elvvTt~~G--L~RYr~GDvV~v~gf 423 (598)
+.|..| -|++-.--| +++=||||+-|-.|-
T Consensus 484 kkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGE 519 (649)
T KOG1179|consen 484 KKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGE 519 (649)
T ss_pred ccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCC
Confidence 566643 566666677 455699999998874
No 141
>COG5475 Uncharacterized small protein [Function unknown]
Probab=32.22 E-value=51 Score=25.49 Aligned_cols=24 Identities=13% Similarity=0.387 Sum_probs=20.4
Q ss_pred cccCCEEEEeeeeCCCCeEEEEeecCc
Q 007558 412 YRVGDILLVTGYYNSAPQFRFVKRKNV 438 (598)
Q Consensus 412 Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 438 (598)
|.|||+|++.. +.|++.+.+-.+|
T Consensus 5 FstgdvV~lKs---GGP~Mtvs~~ss~ 28 (60)
T COG5475 5 FSTGDVVTLKS---GGPRMTVSGYSSD 28 (60)
T ss_pred eecCcEEEeec---CCceEEEeccccC
Confidence 67999999994 8999999887764
No 142
>PLN00190 60S ribosomal protein L21; Provisional
Probab=31.54 E-value=35 Score=32.18 Aligned_cols=38 Identities=16% Similarity=0.337 Sum_probs=28.4
Q ss_pred ccccccCCEEEEee---eeCCCCeEEEEeecCceecccccc
Q 007558 409 LNRYRVGDILLVTG---YYNSAPQFRFVKRKNVLLSIDSDK 446 (598)
Q Consensus 409 L~RYr~GDvV~v~g---f~~~~P~i~f~gR~~~~l~~~GEk 446 (598)
|.-|+.||+|-+.+ ++.+.|.=.|.||++-+.|+.|.-
T Consensus 31 l~~yk~GD~VdIk~~~svqKGMPhk~YHGkTG~V~nv~~~A 71 (158)
T PLN00190 31 LRTFKVGDYVDIKVNGAIHKGMPHKFYHGRTGIVWNVTKRA 71 (158)
T ss_pred HHHhcCCCEEEEEecCCeecCCCcccccCCCeEEEeecCcE
Confidence 44499999999885 445567778899998888777643
No 143
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=30.82 E-value=1e+02 Score=28.69 Aligned_cols=56 Identities=18% Similarity=0.242 Sum_probs=36.6
Q ss_pred cCCCCeEEEEEccc--cccccc----ccCCEEEEeeeeCCCCeEEEEeec----CceecccccccCHH
Q 007558 393 VQVGKQYELVVTTY--AGLNRY----RVGDILLVTGYYNSAPQFRFVKRK----NVLLSIDSDKTDEA 450 (598)
Q Consensus 393 ve~G~~yelvvTt~--~GL~RY----r~GDvV~v~gf~~~~P~i~f~gR~----~~~l~~~GEki~e~ 450 (598)
|.+|+.-+|.||.. +|-+++ .++|+=-|.+ --.|+|+|.+.. +.++.-+-|||+..
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dvRvvkd--i~pPRI~l~Y~L~d~~G~vi~~g~e~L~Dm 112 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDVRVVKD--IYPPRIELSYTLTDADGKVIKQGEEKLKDM 112 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcEEEEcc--CCCCcEEEEEEEECCCCcEEEecceEEecc
Confidence 78999999999974 897665 5556544443 346899887764 33444444555443
No 144
>PF01797 Y1_Tnp: Transposase IS200 like; InterPro: IPR002686 Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated; PDB: 2F5G_B 2F4F_B 2EC2_F 2XM3_C 2XQC_D 2XO6_A 2XMA_E 2VJV_B 2VIH_B 2VJU_A ....
Probab=25.80 E-value=2.3e+02 Score=24.53 Aligned_cols=102 Identities=11% Similarity=0.176 Sum_probs=55.7
Q ss_pred EEeecCceecccccccCHHHHHHHHHHHHHHhhhcCCeEEeEEEeecCCCCCceEEEEEEEeecccCCCCChHHHHHHHH
Q 007558 432 FVKRKNVLLSIDSDKTDEAELQKGIDNASLLLKEFNASVIEYTSYADTTTIPGHYVIFWELLVKDAANSPSDEVLNQCCL 511 (598)
Q Consensus 432 f~gR~~~~l~~~GEki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~E~e~~~~~~~~~~~~l~~~~~ 511 (598)
++-|.+.--.+..+. ..+.+.+.+...+. ..++.+..|++.+| |+.+.+++.. + . .+.++..
T Consensus 8 iv~~~~~r~~~~~~~-~~~~l~~~l~~~~~---~~~~~i~~~~vm~n------HvHllv~~~~-~----~---~is~~~~ 69 (121)
T PF01797_consen 8 IVFRTKYRRPLFNDE-IREALLEILREICE---EYGIEIIAFVVMPN------HVHLLVSIPP-K----Q---SISKFMQ 69 (121)
T ss_dssp EEEEBGGGTSSSSHH-HHHHHHHHHHHHHH---HTTEEEEEEEEETT------EEEEEEEE-T-T----S----HHHHHH
T ss_pred EEEeeeCCEeeeehh-eeeeeeeccccccc---cccceeeeecccCc------ccceeeeecc-c----c---cchheee
Confidence 444444444444555 55667777776654 57899999987654 9999988742 1 1 3444455
Q ss_pred HHHHH----hChhhHhcccc-C--Ccc--CCeEEEEeCCChHHHHHHHH
Q 007558 512 VVEES----LNSVYRQGRVA-D--NSI--GPLEIRVVKNGTFEELMDYA 551 (598)
Q Consensus 512 ~ld~~----Ln~~Y~~~R~~-~--g~l--~p~~v~~v~~gtF~~~~~~~ 551 (598)
.+... +|..|.....+ . |.+ ..--...+....+....++.
T Consensus 70 ~lK~~~s~~~~k~~~~~~~~~~~~~~~Wq~~y~~~~i~~~~~~~~~~YI 118 (121)
T PF01797_consen 70 RLKGRSSRWINKEFPELKKRYFWRGHFWQRGYFDRSIRNESLDNVIRYI 118 (121)
T ss_dssp HHHHHHHHHHHHHTHHHHHSCCT-TSSBESEEEEEEEBSSBHHHHHHHH
T ss_pred cccccccccccccccceecccccccccccCCeEEEEECChhHHHHHHHH
Confidence 55443 35333332211 1 112 23445666666777666553
No 145
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=23.06 E-value=2.4e+02 Score=22.69 Aligned_cols=49 Identities=18% Similarity=0.104 Sum_probs=34.6
Q ss_pred cccCHHHHHHHHHHHHHHhhh-cCCeEEeEEEeecCCCCCceEEEEEEEee
Q 007558 445 DKTDEAELQKGIDNASLLLKE-FNASVIEYTSYADTTTIPGHYVIFWELLV 494 (598)
Q Consensus 445 Eki~e~~v~~av~~a~~~l~~-~g~~l~~f~~~~d~~~~p~~Y~l~~E~e~ 494 (598)
++=.|+.+++||.+|.+.++. .++++.+..+..+. +.-.||.+-+++.|
T Consensus 13 ~~S~edAv~~Av~~A~kTl~ni~~~eV~e~~~~v~d-g~i~~y~v~lkv~F 62 (66)
T PF07311_consen 13 PKSWEDAVQNAVARASKTLRNIRWFEVKEQRGHVED-GKITEYQVNLKVSF 62 (66)
T ss_dssp SSHHHHHHHHHHHHHHHHSSSEEEEEEEEEEEEEET-TCEEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhchhCcEEEEEEEEEEEEeC-CcEEEEEEEEEEEE
Confidence 344578899999999887631 24677788776654 35569998887765
No 146
>cd04866 LigD_Pol_like_3 LigD_Pol_like_3: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 3. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated repair DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=22.81 E-value=56 Score=32.74 Aligned_cols=50 Identities=20% Similarity=0.394 Sum_probs=32.1
Q ss_pred cccCCccceeecccccCCCCcccccCC-hH-HHHHHHHHHHHHHHHHhhcCCC
Q 007558 95 ILSSHPVSEFLTSSGTSAGERKLMPTI-HE-ELDRRQLLFSLLMPVMNLYVPG 145 (598)
Q Consensus 95 ll~~~pi~~f~~TSGTT~G~~K~IP~T-~~-~~~~~~~~~~~~~~~~~~~~p~ 145 (598)
+|..-.+..|.+|||.+ |=.-++|.. .. ..+.....-..++..+.+..|.
T Consensus 121 ~L~~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~~r~fa~~iA~~l~~~~P~ 172 (223)
T cd04866 121 ILDALGLTSFVKTSGNK-GLQVYIPLPDNKFTYDETRLFTEFIAEYLCQQFPE 172 (223)
T ss_pred HHHHcCCccceEccCCC-eEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHCch
Confidence 44445577899999999 899999999 43 2233333333344455555675
Done!