Query         007559
Match_columns 598
No_of_seqs    222 out of 819
Neff          6.8 
Searched_HMMs 46136
Date          Thu Mar 28 12:15:50 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007559.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007559hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG1888 Putative phosphoinosit 100.0  2E-168  4E-173 1368.7  42.4  559    3-594    30-594 (868)
  2 KOG1889 Putative phosphoinosit 100.0  1E-114  2E-119  915.8  32.9  457   58-583    50-516 (579)
  3 COG5329 Phosphoinositide polyp 100.0  1E-107  3E-112  876.7  42.0  486    4-575    15-513 (570)
  4 KOG1890 Phosphoinositide phosp 100.0  1E-100  2E-105  808.2  26.6  438   61-568    47-542 (949)
  5 KOG0566 Inositol-1,4,5-triphos 100.0 4.1E-94 8.9E-99  792.7  38.8  446   57-585    55-522 (1080)
  6 PF02383 Syja_N:  SacI homology 100.0 2.3E-77 4.9E-82  628.7  22.7  292   62-361     1-313 (319)
  7 PF15214 PXT1:  Peroxisomal tes  34.0      12 0.00025   28.3  -0.3   10  164-173    42-51  (51)
  8 PF09547 Spore_IV_A:  Stage IV   30.5 1.4E+02  0.0031   33.2   7.0   69  279-360   180-249 (492)
  9 KOG0566 Inositol-1,4,5-triphos  26.5      97  0.0021   37.4   5.1   39   71-109    78-118 (1080)
 10 PHA02762 hypothetical protein;  20.1 1.2E+02  0.0025   23.6   2.8   35  201-235     5-41  (62)

No 1  
>KOG1888 consensus Putative phosphoinositide phosphatase [Lipid transport and metabolism]
Probab=100.00  E-value=1.6e-168  Score=1368.72  Aligned_cols=559  Identities=56%  Similarity=0.893  Sum_probs=519.5

Q ss_pred             ccccCCCceeEEEEEeccCCCCceeeeCCcccCHHHHHHHHHHhhcCCCcCCCceeeeEEEEEEEEEEEcCceEEEEEeC
Q 007559            3 RARYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRVHDGNRSTGGLKLVTKCFGIVGFIKFLEPYYMLLVTG   82 (598)
Q Consensus         3 ~~~~~~~~~~r~lkidr~~~~~l~i~ed~~~y~~~e~~~ll~~~~~~~~~~g~~~~~~~~~GilG~i~~~~~~YLivIT~   82 (598)
                      +|||+++|+||||||||++|++|+|.||.++||.+|+++||.+|++||+++|||++++.|||||||++|+++||||+||+
T Consensus        30 IGsn~s~t~yrVLkIDrt~p~~Lni~ed~~~yt~~Ei~elL~~i~~g~~~tgGl~~~t~ayGIlGfvkFle~YYLlliTk  109 (868)
T KOG1888|consen   30 IGSNNSETRYRVLKIDRTEPSELNISEDSVVYTSEEIRELLARISEGNRATGGLKKVTSAYGILGFVKFLEGYYLLLITK  109 (868)
T ss_pred             EeecCCCceEEEEEeccCCchhhccCCCccccCHHHHHHHHHHHhcCCccCCceeeeeeeeeeeeEEEecCceEEEEEEc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEeeEeCCceEEEEeeeeEEecCCCCcccccccchhHHHHHHHhhcCCCCCceEEeecccccccccccccCCCCCCCCc
Q 007559           83 RKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQY  162 (598)
Q Consensus        83 ~~~Vg~i~gh~IY~I~~~~~i~i~~~~~~~~~~~~~~E~r~~kll~~~~ls~~FYFSytyDLT~slQ~n~~~~~~~~~~~  162 (598)
                      ++.||.||||.||+|.+++||+|++..++.+   +++|++|+++|+++||+++||||||||||+|||.|......+...+
T Consensus       110 r~~ia~iggH~VY~I~es~mI~I~~~~vq~~---~~~e~r~~r~fq~vDLt~~FYFSYSYditrslQ~N~~~~~~~~~~~  186 (868)
T KOG1888|consen  110 RRQIADIGGHAVYTIDESQMIPIPNDTVQPN---HANEARYLRYFQNVDLTKDFYFSYSYDITRSLQKNILRSRLGGPDY  186 (868)
T ss_pred             ccccccccCceeEEEccceEEEccCCCcCCC---CccHHHHHHHHhhcccccceeEEeehhhhhhhcccccccccCCcch
Confidence            9999999999999999999999999887654   6899999999999999999999999999999999988766544444


Q ss_pred             c-----cccccchhhhHHHHhhccCCCceeEeeeeeeEeeEEEeecceeEEEEEEEeeccCcCcccccccCCCCCcccee
Q 007559          163 E-----SMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVAND  237 (598)
Q Consensus       163 ~-----~~F~WN~~L~~~~~~~~~~~~w~~~lI~Gfv~q~~~~~~g~~~~~tLISRRS~~raGtRy~~RGid~~G~VAN~  237 (598)
                      +     .|||||++|++|+++.+....|++.|+||||+|..+++.|+.+.+|||||||+|+|||||+|||+|..|+|||+
T Consensus       187 ~~~~~~~~FVWN~~Ll~pir~~~~~~~W~v~lvhGf~~Q~~lsi~Gr~~~vtLiARRSr~fAGTRfLKRG~N~~G~VANe  266 (868)
T KOG1888|consen  187 EKLEADEMFVWNSFLLQPIRSILLNTDWTVALVHGFFKQSPLSISGRDFYVTLIARRSRHFAGTRFLKRGANSCGDVANE  266 (868)
T ss_pred             hhhcccceeEehHhHhHHHHHhccchhHHHHHHhhhhccceehhcCceeEEEEEEecccccccchHHhccCCCCCCcccc
Confidence            4     49999999999999988777999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEeEEEEecCCCCCCceEEEEEEEecCcceeeeecCCCCCcccceEEcCCCCchHHHHHHHHHHHHhhCCcEEEEeccc
Q 007559          238 VETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIK  317 (598)
Q Consensus       238 VETEqIv~~~~~~~~~~~~~SfVQiRGSVPlfWsQ~~~~l~~kp~I~~~~~d~~~~a~~~HF~~L~~rYG~pi~vvNLl~  317 (598)
                      |||||||+++..+..+++++||||+|||||+||+|+.+.+.+||+|.++..||+|++++.||++|.+|||+||+||||||
T Consensus       267 VETEQIV~d~~~~~~~~~~sS~VQ~RGSIPl~WsQd~S~~~~KP~I~l~~~DP~y~~a~lHF~~L~~RYG~PIiilNLIK  346 (868)
T KOG1888|consen  267 VETEQIVSDDVPGFHAGRISSFVQMRGSIPLFWSQDASRMVPKPDIVLDKRDPFYETAALHFDNLVQRYGNPIIILNLIK  346 (868)
T ss_pred             eeeeeeEecCcCCCCccceeeeeeccccccceeccchhhcCCCCCeEEeccCCccchHHHHHHHHHHhcCCcEEEEEeec
Confidence            99999999997777788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccchHHHHHHHHHHHHhhcCCCCCCeeEEEeecccccc-ccccHHHHHHHHHHhhhhhcceeeeccCCCccccc
Q 007559          318 TNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSR-KAINALQILGRAGAYALSLTGIFYCQVTPKPEGLL  396 (598)
Q Consensus       318 ~~e~k~~E~~L~~~f~~~v~~ln~~lp~~~~i~y~~fD~h~~~K-k~~nv~~~l~~ia~~~l~~~gff~~~~~~~~~~~~  396 (598)
                      ++||++||.+|.++|+++|+||||+||++++++|++||||+..| +..||+..|+++|+.++..||+|+..+  .. +.+
T Consensus       347 t~ekr~~E~IL~~eF~~ai~yLNqflp~e~rl~~i~wD~hk~~Ks~~~nVle~L~~~a~~~v~~tG~f~~~~--~~-~~~  423 (868)
T KOG1888|consen  347 TNEKRPRESILREEFENAIDYLNQFLPPENRLKYIHWDMHKHSKSKGQNVLEVLEKVAESAVMLTGIFFNMP--LR-DSL  423 (868)
T ss_pred             cccCCchhHHHHHHHHHHHHHHhccCCCcceeeeeechHHhhhccCcccHHHHHHHHHhhhHhhhceeeccc--ch-hhh
Confidence            99999999999999999999999999999999999999999999 999999999999999999999999722  11 111


Q ss_pred             ccccccCCCCCCCcccCCCCccccccccccCCCCCCCCCCCCCccceeeeeEEeeecCccchhhhHHHHHHHHHHHHHHH
Q 007559          397 NLSCIERSDDDYPQNLSHKNEDAETVDREVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVVALGLQL  476 (598)
Q Consensus       397 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~GV~RtNClDCLDRTNv~Q~~i~~~~L~~qL  476 (598)
                      +...     +        -.+..+.++           |  .....+.|+||+||||+|||||||||||++|++||++||
T Consensus       424 ~~~~-----~--------~~~~~dd~~-----------g--~~~~~rlQ~GIlRtNCiDCLDRTN~AQf~~Gk~ALg~QL  477 (868)
T KOG1888|consen  424 KLSP-----S--------PHESADDIE-----------G--DVKPPRLQSGILRTNCIDCLDRTNVAQFAIGKAALGCQL  477 (868)
T ss_pred             hcCC-----C--------ccccccccc-----------c--cccchhhcccceeccchhhcccccHHHHHHHHHHHHHHH
Confidence            1110     0        011111111           1  135688999999999999999999999999999999999


Q ss_pred             HHcCCCCCCCCCCCchHHHHHHHHHHHhhhHhHhhhcCCcccchhhhhhccccccccchHHHHHHHHHHHhhccCChhhH
Q 007559          477 KTLGLLKSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQ  556 (598)
Q Consensus       477 ~~lg~~~~~~~~~~~~~~~~l~~lw~~~GD~iS~qYaGT~A~~~~~t~r~g~~~~~~~~~D~~~S~~Ryy~N~F~D~~kQ  556 (598)
                      ++|||++.|.+++|++++..|++||++|||++|+|||||+||++++| +++.|.++.+++|+++|++|||+|+|+|++||
T Consensus       478 ~~LGi~D~p~lelDs~~v~~L~dLye~~GDtlAlQYgGS~lvh~v~t-yrk~~~~s~~srd~~~TL~RyYsNaf~D~dkQ  556 (868)
T KOG1888|consen  478 HALGISDKPNLELDSDIVSLLEDLYEEHGDTLALQYGGSQLVHSVKT-YRKTAQWSTQSRDFLQTLSRYYSNAFVDADKQ  556 (868)
T ss_pred             HHccCccCcccccCcHHHHHHHHHHHHhhhHHHHHhchhhhhhhhhh-hhhhhhhhhHHHHHHHHHHHHHhhccccHHHH
Confidence            99999999999999999999999999999999999999999999999 66788888999999999999999999999999


Q ss_pred             HHHHHHhcCcCCCCCCCcccccCCCcccccCCCCCCcc
Q 007559          557 NAINVFLGHFQPQQGKPALWELDSDQHHIIGIHDPNVI  594 (598)
Q Consensus       557 ~aInLfLG~~~p~~~~~~lw~l~~d~~lh~~~~~~~~~  594 (598)
                      +|||||||.|+|++++|+||||+||||||+.+.+....
T Consensus       557 daINLFLG~f~P~~g~p~LWel~sD~~lH~~~~l~~~~  594 (868)
T KOG1888|consen  557 DAINLFLGVFRPSEGKPALWELRSDYYLHVAGSLREIS  594 (868)
T ss_pred             HHHHHHhccccccCCCCccccccccHHHhccccccCCC
Confidence            99999999999999999999999999999998876653


No 2  
>KOG1889 consensus Putative phosphoinositide phosphatase [Lipid transport and metabolism]
Probab=100.00  E-value=1.1e-114  Score=915.76  Aligned_cols=457  Identities=32%  Similarity=0.573  Sum_probs=400.3

Q ss_pred             eeeEEEEEEEEEEEcCceEEEEEeCeeEeeEeCCceEEEEeeeeEEecCCCCcccccccchhHHHHHHHhhcCCCCCceE
Q 007559           58 LVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFF  137 (598)
Q Consensus        58 ~~~~~~GilG~i~~~~~~YLivIT~~~~Vg~i~gh~IY~I~~~~~i~i~~~~~~~~~~~~~~E~r~~kll~~~~ls~~FY  137 (598)
                      .+..+||++|+|.+..+.||+|||++..||.+.||.||+|.+.++||.....  ....+.+.|..|.++|+.+.-+++||
T Consensus        50 ~~~~i~gv~G~ikL~~~~ylivvt~~~~vg~~~gh~i~~v~~~~iIp~k~~~--~~~~q~k~~~~~~~lL~~~lkt~~fy  127 (579)
T KOG1889|consen   50 VIRSIFGVLGMIKLLAGSYLIVVTEAESVGQFNGHVIYRITDFEIIPYKKTN--LTEEQIKMETEFSNLLSHVLKTGGFY  127 (579)
T ss_pred             ceeeeeeeeeEEEEecCcEEEEEEehhhhccccCcceEEEeeeeEEEeecCC--chHHHHHHHHHHHHHHHHHHhcCceE
Confidence            3568999999999999999999999999999999999999999999998751  11223455567899999888899999


Q ss_pred             Eeeccccccccccc--ccCCC---CCCCCcccccccchhhhHHHHhhccCCCceeEeeeeeeEeeEEEeecceeEEEEEE
Q 007559          138 FSYSYNIMNSLQKN--LCNNG---TGQSQYESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIA  212 (598)
Q Consensus       138 FSytyDLT~slQ~n--~~~~~---~~~~~~~~~F~WN~~L~~~~~~~~~~~~w~~~lI~Gfv~q~~~~~~g~~~~~tLIS  212 (598)
                      ||||||||+|+|+.  ..+..   +.+...|.+|+||.+|++.+++....+.+.+|+||||+++..+.+.|+.+.++|||
T Consensus       128 fSyt~dlT~slqrl~~~~~~~~~~~l~~~ad~rFlwN~~ll~~~~~~~~~~~f~lpvi~Gf~~~~~~~i~~~tv~l~lIs  207 (579)
T KOG1889|consen  128 FSYTYDLTNSLQRLHENADEGKALSLWRRADKRFLWNGYLLEDLIDNAKVDLFILPVIQGFIGSVDVGINGKTVDLTLIS  207 (579)
T ss_pred             EEEEEccchHHHhhhhccccccccchhhhcccceeecchhHHHHhcCccccchhhHHhhhhhheeeEeeccceEEEEEee
Confidence            99999999999983  33221   12446789999999999999987667899999999999999999999999999999


Q ss_pred             EeeccCcCcccccccCCCCCccceeeeEeEEEEecCCCCCCceEEEEEEEecCcceeeeecCCCCCcccceEEcCCCCch
Q 007559          213 RRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKY  292 (598)
Q Consensus       213 RRS~~raGtRy~~RGid~~G~VAN~VETEqIv~~~~~~~~~~~~~SfVQiRGSVPlfWsQ~~~~l~~kp~I~~~~~d~~~  292 (598)
                      |||+.||||||++||+|.+|+|||||||||||...      +..+||||+|||||+||+|.+ ++.+||.+.+.+.+...
T Consensus       208 RRs~~RaGtRyfrRG~D~~G~vaNfvETEQIv~~~------~~~~SFvQ~RGSiP~~W~qv~-nL~YkP~~~l~~~~~~~  280 (579)
T KOG1889|consen  208 RRSIRRAGTRYFRRGSDEDGYVANFVETEQIVEYN------GHTTSFVQTRGSIPFFWEQVP-NLRYKPKPVLVPPENAL  280 (579)
T ss_pred             hhhhhccceeEEecccCCcccccccceeeEEEEec------CcEEEEEEeccCccchHHhcC-CCccCCceeecChHHHH
Confidence            99999999999999999999999999999999986      479999999999999999976 78899999999889899


Q ss_pred             HHHHHHHHHHHHhhCCcEEEEecccCCCCCcccchHHHHHHHHHHHHhhcCCCCCCeeEEEeecccccc--ccccHHHHH
Q 007559          293 EATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSR--KAINALQIL  370 (598)
Q Consensus       293 ~a~~~HF~~L~~rYG~pi~vvNLl~~~e~k~~E~~L~~~f~~~v~~ln~~lp~~~~i~y~~fD~h~~~K--k~~nv~~~l  370 (598)
                      .++.+||+++.+.||+ +++|||++++   ++|++|.++|++.++.+|.     ..|+|++||||++|+  .+.++.-++
T Consensus       281 ~~~~rhF~~~~~~YG~-~v~VNLvnqK---G~E~~l~~~ye~~~~~~~~-----~~irYv~FDFHkec~~m~wdrl~lll  351 (579)
T KOG1889|consen  281 AAFGRHFDELRKKYGD-VVAVNLVNQK---GREGPLKEGYEKVVRRLNN-----PPIRYVHFDFHKECGHMRWDRLSLLL  351 (579)
T ss_pred             HHHHHHHHHHHHHhCC-EEEEEeeccc---CcccchhhHHHHHHHhcCC-----CCceEEEeehhhhccccchhhHHHHH
Confidence            9999999999999997 8999999985   5599999999999999873     469999999999999  444444455


Q ss_pred             HHHHHhhhhhcceeeeccCCCcccccccccccCCCCCCCcccCCCCccccccccccCCCCCCCCCCCCCccceeeeeEEe
Q 007559          371 GRAGAYALSLTGIFYCQVTPKPEGLLNLSCIERSDDDYPQNLSHKNEDAETVDREVSSGSHVPSANLSIKVPILQKGVLR  450 (598)
Q Consensus       371 ~~ia~~~l~~~gff~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~GV~R  450 (598)
                      +.++. .++..|+|+...                                             +    ++....|+||+|
T Consensus       352 ~~ie~-~~~~~gy~~~~~---------------------------------------------~----g~~~~~Q~gvvR  381 (579)
T KOG1889|consen  352 EQIEQ-ELEEFGYFLLDS---------------------------------------------N----GKTVLEQTGVVR  381 (579)
T ss_pred             HHHHH-HHHhcCEEEEec---------------------------------------------C----CceeeeecCeee
Confidence            66554 478889887421                                             1    234558999999


Q ss_pred             eecCccchhhhHHHHHHHHHHHHHHHHHcCCCCCCC-CCCCchHHHHHHHHHHHhhhHhHhhhcCCcccchhhhhhcccc
Q 007559          451 TNCIDCLDRTNVAQYAYGVVALGLQLKTLGLLKSPN-IGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQW  529 (598)
Q Consensus       451 tNClDCLDRTNv~Q~~i~~~~L~~qL~~lg~~~~~~-~~~~~~~~~~l~~lw~~~GD~iS~qYaGT~A~~~~~t~r~g~~  529 (598)
                      ||||||||||||+|+++|+.+|..||+.+|++.... ++-.+++...++.+|+||||.||+||+||+|+|++|| |+|++
T Consensus       382 TNCmDCLDRTNVvQs~lar~~L~~qL~~~gVl~~~~~le~~~~f~~~fk~iWAdngD~iS~qYSGT~ALKtDFt-R~G~R  460 (579)
T KOG1889|consen  382 TNCMDCLDRTNVVQSMLARWSLQKQLRKLGVLHAGQKLEEADPFESIFKNLWADNGDYISIQYSGTGALKTDFT-RTGKR  460 (579)
T ss_pred             ccchhhccchhHHHHHHHHHHHHHHHHhcCeeccccchhhcccHHHHHHHhhhcccchhhhhccCCccccccee-eccce
Confidence            999999999999999999999999999999987543 5555778899999999999999999999999999998 99999


Q ss_pred             ccccchHHHHHHHHHHHhhccCChhhHHHHHHHhcCcCCCCCC--CcccccCCCcc
Q 007559          530 RAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLGHFQPQQGK--PALWELDSDQH  583 (598)
Q Consensus       530 ~~~~~~~D~~~S~~Ryy~N~F~D~~kQ~aInLfLG~~~p~~~~--~~lw~l~~d~~  583 (598)
                      +..|.++|+.+|++|||.|||.||.||||||||||+|.|....  +++-.+..+.|
T Consensus       461 T~~Ga~~Dg~Ns~~RYylNNf~DG~rQDsiDL~lG~f~v~~s~s~~~pl~~~~~~~  516 (579)
T KOG1889|consen  461 TIVGALKDGWNSFRRYYLNNFADGTRQDSIDLFLGNFRVDVSRSDLSPLPLRRGLY  516 (579)
T ss_pred             eehhhhHhHHHHHHHHHHhcccCccccchHHHhcCCcccccccccCCCcccccCce
Confidence            9999999999999999999999999999999999999998765  44444444433


No 3  
>COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Probab=100.00  E-value=1.2e-107  Score=876.74  Aligned_cols=486  Identities=31%  Similarity=0.531  Sum_probs=402.0

Q ss_pred             cccCCCceeEEEEEeccCCCCceeeeCCcccCHHHHHHHHHHhhcCCCcCCCceeeeEEEEEEEEEEEcCceEEEEEeCe
Q 007559            4 ARYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRVHDGNRSTGGLKLVTKCFGIVGFIKFLEPYYMLLVTGR   83 (598)
Q Consensus         4 ~~~~~~~~~r~lkidr~~~~~l~i~ed~~~y~~~e~~~ll~~~~~~~~~~g~~~~~~~~~GilG~i~~~~~~YLivIT~~   83 (598)
                      +||+-...||-+   -..+.++.+.++...+...+..+-+..+.+          ..+++|++|+|.+.+..||++||++
T Consensus        15 ~sn~~~~~fr~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~i~g~~Gli~l~~~~yl~~it~~   81 (570)
T COG5329          15 VSNNYALSFRRL---GVKNSERILCATELVGVRFEPDEGFSSLSS----------AHKIYGVIGLIKLKGDIYLIVITGA   81 (570)
T ss_pred             EeccceEEEEec---CCCccceEEEeeccceeecccCccchhhcc----------ceeEEeEEEEEEecCcEEEEEEecc
Confidence            466666777766   223356777777777777776665555432          2579999999999999999999999


Q ss_pred             eEeeEeCCceEEEEeeeeEEecCCCCcccccccchhHHHHHH--HhhcCCCCCceEEeecccccccccccccCCC-CCCC
Q 007559           84 KKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKK--LLSSVDLTKDFFFSYSYNIMNSLQKNLCNNG-TGQS  160 (598)
Q Consensus        84 ~~Vg~i~gh~IY~I~~~~~i~i~~~~~~~~~~~~~~E~r~~k--ll~~~~ls~~FYFSytyDLT~slQ~n~~~~~-~~~~  160 (598)
                      +.||.++||.||+|.++++||+.++.....  ...||+++.+  -|+.+..++.|||||+||||++||++..... ...+
T Consensus        82 s~v~~~~g~~IykI~~vdfi~l~~~~~d~~--~~~~~~~~~~~~~lk~Lls~gtFYfS~~~diTn~lQ~~~~~~~~~~~~  159 (570)
T COG5329          82 SLVGVIPGHSIYKILDVDFISLNNNKWDDE--LEEDEANYDKLSELKKLLSNGTFYFSYDFDITNSLQKNLSEGLEASVD  159 (570)
T ss_pred             eEEeeeCCcceEEEeeeEEEEccccccchh--hhhhhhhhhhhhhhhhhhcCCcEEEecccchhhhhhhccccCcccccc
Confidence            999999999999999999999998754322  2236677776  3333556799999999999999999832211 1234


Q ss_pred             CcccccccchhhhHHHHhhcc--------CCCceeEeeeeeeEeeEEEeecceeEEEEEEEeeccCcCcccccccCCCCC
Q 007559          161 QYESMFVWNHFLTRGIRNTLK--------NNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKG  232 (598)
Q Consensus       161 ~~~~~F~WN~~L~~~~~~~~~--------~~~w~~~lI~Gfv~q~~~~~~g~~~~~tLISRRS~~raGtRy~~RGid~~G  232 (598)
                      ..+.+|+||++|++.+.++..        ...|++++|+||+++..+.+.++.+.++||||||++||||||++||||++|
T Consensus       160 ~~d~~f~wN~fl~~e~i~~r~~~~~~~k~~~~flt~vIrGf~~t~~~~~~~~~i~ltLISR~S~~raGtRy~~RGiDddG  239 (570)
T COG5329         160 RADLIFMWNSFLLEEFINHRSKLSSLEKQFDNFLTTVIRGFAETVDIKVGGNTISLTLISRRSSERAGTRYLSRGIDDDG  239 (570)
T ss_pred             chhheeecchhhHHHHHhhcccCChhhhcccchheeeeeeeeeeEEEeecCceEEEEEEEeehhhcccceeeccccCCCC
Confidence            468899999999999876421        123999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeeEeEEEEecCCCCCCceEEEEEEEecCcceeeeecCCCCCcccceEEcCC-CCchHHHHHHHHHHHHhhCCcEE
Q 007559          233 RVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKK-DKKYEATRLHFENLAKRYGNPII  311 (598)
Q Consensus       233 ~VAN~VETEqIv~~~~~~~~~~~~~SfVQiRGSVPlfWsQ~~~~l~~kp~I~~~~~-d~~~~a~~~HF~~L~~rYG~pi~  311 (598)
                      |||||||||||+....      .++||||+|||||+||+| .+. ...|+|.+.+. +.+..||.+||++|.++||. |.
T Consensus       240 nvsnFVETE~Iv~~~~------~~fSf~QvRGSIPifWeq-~~~-l~~pkI~i~~s~~a~~~af~kHF~~L~~~YG~-v~  310 (570)
T COG5329         240 NVSNFVETEQIVTDSQ------YIFSFTQVRGSIPLFWEQ-SNL-LYGPKIKVTRSSEAAQSAFDKHFDKLREKYGD-VY  310 (570)
T ss_pred             cccceeeeEEEEEecc------eEEEEEEecCceeeEEhh-hcc-ccCCCeEEeccchhhHHHHHHHHHHHHHHcCC-EE
Confidence            9999999999999874      799999999999999999 433 45677888764 45889999999999999996 99


Q ss_pred             EEecccCCCCCcccchHHHHHHHHHHHHhhcCCCCCCeeEEEeecccccc-ccccHHHHHHHHHHhhhhhcceeeeccCC
Q 007559          312 VLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSR-KAINALQILGRAGAYALSLTGIFYCQVTP  390 (598)
Q Consensus       312 vvNLl~~~e~k~~E~~L~~~f~~~v~~ln~~lp~~~~i~y~~fD~h~~~K-k~~nv~~~l~~ia~~~l~~~gff~~~~~~  390 (598)
                      |||||++++   +|.+|.++|++++...|     ..+|.|+.||||++|+ ........|.......+...|||..... 
T Consensus       311 vvNLl~tK~---~E~~L~~~ye~~l~~~~-----~~~i~~~~fdfh~e~~~~~~~~~~~Ll~~i~~~l~~~gy~~~d~~-  381 (570)
T COG5329         311 VVNLLKTKG---YEAPLLELYEKHLDLSK-----KPKIHYTEFDFHKETSQDGFDDVKKLLYLIEQDLLEFGYFAYDIN-  381 (570)
T ss_pred             EEEcccCCc---chhHHHHHHHHHHhhCC-----CCCceeEEEeehhcccccccccHHHHHHHHHHHHHhcCceecccc-
Confidence            999999854   59999999999998433     3468999999999999 4444445444455555777888753211 


Q ss_pred             CcccccccccccCCCCCCCcccCCCCccccccccccCCCCCCCCCCCCCccceeeeeEEeeecCccchhhhHHHHHHHHH
Q 007559          391 KPEGLLNLSCIERSDDDYPQNLSHKNEDAETVDREVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVV  470 (598)
Q Consensus       391 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~GV~RtNClDCLDRTNv~Q~~i~~~  470 (598)
                                                                     ......+|+||+||||+||||||||+|+.|| .
T Consensus       382 -----------------------------------------------~~~~~s~Q~GV~RtNClDCLDRTNviQ~~Is-r  413 (570)
T COG5329         382 -----------------------------------------------EGKSISEQDGVFRTNCLDCLDRTNVIQSLIS-R  413 (570)
T ss_pred             -----------------------------------------------CCceeeeecceEEecchhhcccchHHHHHHH-H
Confidence                                                           1357889999999999999999999999999 5


Q ss_pred             HHHHHHHHcCCCCCCCCCCCchHHHHHHHHHHHhhhHhHhhhcCCcccchhhhhhccccccccchHHHHHHHHHHHhhcc
Q 007559          471 ALGLQLKTLGLLKSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTY  550 (598)
Q Consensus       471 ~L~~qL~~lg~~~~~~~~~~~~~~~~l~~lw~~~GD~iS~qYaGT~A~~~~~t~r~g~~~~~~~~~D~~~S~~Ryy~N~F  550 (598)
                      +|.+|+...+.+..    .++|+++.+.++|+||||+||++|+||+|+|+.|| |+|+++++|.++|+.+|++|||+|||
T Consensus       414 ~~le~~~~~~~i~~----~~~~fl~~~~~LWaDNgd~is~~YTGt~alks~fT-r~g~~s~~gal~D~~~S~~R~y~nnf  488 (570)
T COG5329         414 VLLEQFRSEGVISD----GYSPFLQIHRELWADNGDAISRLYTGTGALKSSFT-RRGRRSFAGALNDFIKSFSRYYINNF  488 (570)
T ss_pred             HHHHHHHhhhhhcc----cccHHHHHHHHHHhhchhHHHHHhcCCccccchhh-hhcchhhhhhhhhhhhhhHHhhcccc
Confidence            66677777776643    22389999999999999999999999999999998 89999999999999999999999999


Q ss_pred             CChhhHHHHHHHhcCcCCCCCCCcc
Q 007559          551 VDAEKQNAINVFLGHFQPQQGKPAL  575 (598)
Q Consensus       551 ~D~~kQ~aInLfLG~~~p~~~~~~l  575 (598)
                      .|+.||++||||||.+.|++.-+-.
T Consensus       489 ~D~~rQ~~idllLg~~~~~~~~~~~  513 (570)
T COG5329         489 TDGQRQDAIDLLLGKFRPQEAFSYR  513 (570)
T ss_pred             cchhhhhHHHHHhccCCCccccccc
Confidence            9999999999999999998866544


No 4  
>KOG1890 consensus Phosphoinositide phosphatase SAC1 [Lipid transport and metabolism]
Probab=100.00  E-value=1.1e-100  Score=808.16  Aligned_cols=438  Identities=30%  Similarity=0.493  Sum_probs=374.9

Q ss_pred             EEEEEEEEEEEcCce--EEEEEeCeeEeeEeCC-ceEEEEeeeeEEecCCCCcc-------------------cc-----
Q 007559           61 KCFGIVGFIKFLEPY--YMLLVTGRKKIGVICG-HAVYSIKKSEIIPIPHSSVL-------------------SN-----  113 (598)
Q Consensus        61 ~~~GilG~i~~~~~~--YLivIT~~~~Vg~i~g-h~IY~I~~~~~i~i~~~~~~-------------------~~-----  113 (598)
                      ...|++|.|.|.+.+  +|++|.++..||.+.| |.||+|+++..+.+..+...                   +.     
T Consensus        47 ~veg~iGkIsl~~~~~~~L~~v~~~s~Vg~l~g~H~v~ki~~i~~ls~~~pd~dl~~ckkhh~~~n~~~~i~Pss~~sKf  126 (949)
T KOG1890|consen   47 NVEGLIGKISLDEQHEPFLFFVVDSSVVGCLRGSHSVRKIERIIALSVKSPDTDLSVCKKHHSVSNNNNAITPSSGGSKF  126 (949)
T ss_pred             ceeeeEEEEeccccCCceEEEEEeeeeEEEecCCceeeeEEEEEEEecCCCCccchhhhhhccccCCCCcccCCCCcchH
Confidence            467899999999876  9999999999999965 99999999999988764210                   00     


Q ss_pred             -----------cc--------cc--h--hHHHH-HHHhhcCCCCCceEEeecccccccccccccCCCCCCCCcccccccc
Q 007559          114 -----------LA--------YS--K--NEKRY-KKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESMFVWN  169 (598)
Q Consensus       114 -----------~~--------~~--~--~E~r~-~kll~~~~ls~~FYFSytyDLT~slQ~n~~~~~~~~~~~~~~F~WN  169 (598)
                                 ++        .+  +  -|.|+ ..+++.++-+++||||.+||+|+++|+.-....++....|++|+||
T Consensus       127 l~kt~~~iksn~~a~n~kkVk~srEpr~ierrlleellK~F~ds~sFYfs~~~DvTns~Qr~~~~~re~~s~~ddrFFWN  206 (949)
T KOG1890|consen  127 LKKTTEKIKSNFAAANTKKVKKSREPRHIERRLLEELLKLFNDSKSFYFSRSRDVTNSSQRYEFEKREAHSTSDDRFFWN  206 (949)
T ss_pred             HHHHHHHHHhhccccchhhhhcccCcchhhHHHHHHHHHHhccccceEEEeecccccHHhhhhhhhcccccCccchhhhH
Confidence                       00        01  1  13332 4555666679999999999999999998666666677789999999


Q ss_pred             hhhhHHHHhhcc-CCCceeEeeeeeeEeeEEEeecc--e-eEEEEEEEeeccCcCcccccccCCCCCccceeeeEeEEEE
Q 007559          170 HFLTRGIRNTLK-NNQWTVALVYGFFKQENLSVAGR--D-FKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVV  245 (598)
Q Consensus       170 ~~L~~~~~~~~~-~~~w~~~lI~Gfv~q~~~~~~g~--~-~~~tLISRRS~~raGtRy~~RGid~~G~VAN~VETEqIv~  245 (598)
                      ++|.+.+.+.-. ...|++|+||||+....+.+.+.  . +.++||||||+||||+||.+||||+.||||||||||||+.
T Consensus       207 K~Mi~dL~e~~~~D~~wi~PiiQGfvq~e~lvi~de~~c~ftialiSRRSrhRAG~RYkRRGvDe~gNvANyVETEqil~  286 (949)
T KOG1890|consen  207 KRMIGDLGEAKISDKKWICPIIQGFVQTEQLVITDEINCYFTIALISRRSRHRAGARYKRRGVDEAGNVANYVETEQILN  286 (949)
T ss_pred             HHHHhhHhhcCCCCccEeehhhhhhhhhheEEeccccceEEEEEeeechhhhhccchhhhcCcccccchhhhhhHHHHHH
Confidence            999999987432 35899999999999999888765  3 8999999999999999999999999999999999999997


Q ss_pred             ecCCCCCCceEEEEEEEecCcceeeeecCCCCCcccceEEcC-CCCchHHHHHHHHHHHHhhCCcEEEEecccCCCCCcc
Q 007559          246 EDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSK-KDKKYEATRLHFENLAKRYGNPIIVLNLIKTNEKKPR  324 (598)
Q Consensus       246 ~~~~~~~~~~~~SfVQiRGSVPlfWsQ~~~~l~~kp~I~~~~-~d~~~~a~~~HF~~L~~rYG~pi~vvNLl~~~e~k~~  324 (598)
                      ...      +-.||||+|||||+||||.+.++.|  |..+.+ ..++..+|..||.+++..|+. +++|||++++++   
T Consensus       287 ~~~------H~LSFvQ~RGSvPvfWSQ~GykYrP--pprldRsv~ET~~~F~~HF~~~l~~Y~~-~vivnLVdQ~Gr---  354 (949)
T KOG1890|consen  287 IFE------HELSFVQCRGSVPVFWSQRGYKYRP--PPRLDRSVEETHGVFTEHFKRLLAHYDT-LVIVNLVDQRGR---  354 (949)
T ss_pred             hhh------ceeeEEEeecccceeecccCcccCC--CccccchHHHHHHHHHHHHHHHHHhhCc-EEEEEhhhhcCc---
Confidence            653      5689999999999999999866554  444543 577899999999999999998 889999999655   


Q ss_pred             cchHHHHHHHHHHHHhhcCCCCCCeeEEEeecccccc--ccccHHHHHHHHHHhhhhhcceeeeccCCCccccccccccc
Q 007559          325 ETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSR--KAINALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCIE  402 (598)
Q Consensus       325 E~~L~~~f~~~v~~ln~~lp~~~~i~y~~fD~h~~~K--k~~nv~~~l~~ia~~~l~~~gff~~~~~~~~~~~~~~~~~~  402 (598)
                      |.+++++|.++|-.+|     .+++.|+.||||.+|+  +.+||-.+++.+.+. +...||.+...              
T Consensus       355 Ek~igdayl~hvvk~n-----n~~ltyvsFDfH~hCRGm~FenvqtLida~~~~-~~~mgfcWvD~--------------  414 (949)
T KOG1890|consen  355 EKPIGDAYLEHVVKAN-----NNDLTYVSFDFHQHCRGMNFENVQTLIDAMEET-LKTMGFCWVDK--------------  414 (949)
T ss_pred             ccchHHHHHHHHHccc-----CCceEEEEeehHHhhCccchhhHHHHHHHHHHH-HhhceeEEecc--------------
Confidence            9999999999988776     4689999999999999  889988887776554 55568766311              


Q ss_pred             CCCCCCCcccCCCCccccccccccCCCCCCCCCCCCCccceeeeeEEeeecCccchhhhHHHHHHHHHHHHHHHHHcCCC
Q 007559          403 RSDDDYPQNLSHKNEDAETVDREVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVVALGLQLKTLGLL  482 (598)
Q Consensus       403 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~GV~RtNClDCLDRTNv~Q~~i~~~~L~~qL~~lg~~  482 (598)
                                                          ..+++.|+||||||||||||||||+|..||+.++++||++||+.
T Consensus       415 ------------------------------------~Gvic~QkgvfRvNCmDCLDRTNvVQ~aI~~~V~eqQl~kLGi~  458 (949)
T KOG1890|consen  415 ------------------------------------TGVICSQKGVFRVNCMDCLDRTNVVQGAISLFVVEQQLQKLGIF  458 (949)
T ss_pred             ------------------------------------cceeecccceEEeehhhhhchhhHHHHHHHHHHHHHHHHHhCCC
Confidence                                                13788999999999999999999999999999999999999996


Q ss_pred             CCCCCCCCchHHHHHHHHHHHhhhHhHhhhcCCcccchhhhhhccccccccchHHHHHHHHHHHhhccCChhhHHHHHHH
Q 007559          483 KSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVF  562 (598)
Q Consensus       483 ~~~~~~~~~~~~~~l~~lw~~~GD~iS~qYaGT~A~~~~~t~r~g~~~~~~~~~D~~~S~~Ryy~N~F~D~~kQ~aInLf  562 (598)
                       .|..++...+.+.++.||++|||.||.|||||+|+|+++| |+|.++++|.|+|+++|..|||.+.|.|++||.+|||.
T Consensus       459 -pP~~p~Pe~l~~~~q~mWAnNGD~ISrQYAGTaALKGD~T-RtGERKl~GvMKDG~NSAnRYYL~rfKDayRQa~Idlm  536 (949)
T KOG1890|consen  459 -PPLCPPPEVLVQTMQTMWANNGDVISRQYAGTAALKGDVT-RTGERKLMGVMKDGYNSANRYYLTRFKDAYRQAAIDLM  536 (949)
T ss_pred             -CCCCCChHHHHHHHHHHhhcCCceeehhhcchhhhcCccc-ccchHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHh
Confidence             4666666778899999999999999999999999999998 99999999999999999999999999999999999999


Q ss_pred             hcCcCC
Q 007559          563 LGHFQP  568 (598)
Q Consensus       563 LG~~~p  568 (598)
                      +|+-..
T Consensus       537 ~G~~v~  542 (949)
T KOG1890|consen  537 TGQTVA  542 (949)
T ss_pred             cCCchh
Confidence            998654


No 5  
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00  E-value=4.1e-94  Score=792.65  Aligned_cols=446  Identities=28%  Similarity=0.449  Sum_probs=369.1

Q ss_pred             eeeeEEEEEEEEEEEcCceEEEEEeCeeEeeEeCC-ceEEEEeeeeEEecCCC--CcccccccchhH---------HHHH
Q 007559           57 KLVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICG-HAVYSIKKSEIIPIPHS--SVLSNLAYSKNE---------KRYK  124 (598)
Q Consensus        57 ~~~~~~~GilG~i~~~~~~YLivIT~~~~Vg~i~g-h~IY~I~~~~~i~i~~~--~~~~~~~~~~~E---------~r~~  124 (598)
                      ...+.+||+||++++.++.|+.+|++...|+.+.| ..|++|.+++|++|.+.  .+..-...+++|         -.++
T Consensus        55 ~k~~~~yG~LGll~l~~~~~~~vi~g~~~l~~V~~~~sv~ki~~vdf~~l~~~~~dFi~l~~~~~~~~~~~~~~~~s~Lr  134 (1080)
T KOG0566|consen   55 SKSHDIYGILGLLRLNGGDFVAVISGVSFLAQVTGSESVGKIEDVDFYSLTNTVWDFISLERSSSPEDTLYPKHPCSELR  134 (1080)
T ss_pred             ccceeeeeeeEEEEEcCCceEEEeccceEEEEecCCceeccccceeEEEeccchhhheecccCCCCccccccccchHHHH
Confidence            34689999999999999999888888877777643 55666666666665544  110000011111         3468


Q ss_pred             HHhhcCCCCCceEEeecccccccccccccCCCCCCCCcccccccchhhhHHHHhh-------ccCCCceeEeeeeeeEee
Q 007559          125 KLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESMFVWNHFLTRGIRNT-------LKNNQWTVALVYGFFKQE  197 (598)
Q Consensus       125 kll~~~~ls~~FYFSytyDLT~slQ~n~~~~~~~~~~~~~~F~WN~~L~~~~~~~-------~~~~~w~~~lI~Gfv~q~  197 (598)
                      |||++    +.||||.+||||..+|+....    ...++.+|+||++|..+++++       ++...|++.+|+|||+..
T Consensus       135 kLLss----GsFYfS~~fDlt~~~q~rg~~----~d~~d~~f~WN~~L~~el~~~~s~~k~l~d~~~~Ll~~irG~ve~~  206 (1080)
T KOG0566|consen  135 KLLSS----GSFYFSSDFDLTCFAQNRGDQ----TDETDLRFFWNRFLHSELINYRSHLKQLLDCDGFLLTVIRGFVETR  206 (1080)
T ss_pred             HHhhC----CcEEEeeccchhhHHHhcCCC----cccccceeechhHHHHHHHHhhhhhhhccccccHHHHhhhceEEEE
Confidence            88886    999999999999999987311    234588999999999998764       345789999999999999


Q ss_pred             EEEeecceeEEEEEEEeeccCcCcccccccCCCCCccceeeeEeEEEEecCCCCCCceEEEEEEEecCcceeeeecCCCC
Q 007559          198 NLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWM  277 (598)
Q Consensus       198 ~~~~~g~~~~~tLISRRS~~raGtRy~~RGid~~G~VAN~VETEqIv~~~~~~~~~~~~~SfVQiRGSVPlfWsQ~~~~l  277 (598)
                      .+.++.+.+.++||||.||.||||||+.|||||+|||||||||||||..+.      .++|||||||||||||+|++.++
T Consensus       207 ~iy~g~~~~~~~iISR~S~eragtrf~~rGidddG~VanFVETE~iv~~~~------~v~Sf~QIRGSvPlFWEQ~g~~~  280 (1080)
T KOG0566|consen  207 TIYVGANTARMTLISRLSCERAGTRFNVRGIDDDGNVANFVETEQIVYSDQ------TVFSFTQIRGSVPLFWEQPGVQV  280 (1080)
T ss_pred             EEEeccceeeEEEEEeehhcccCceecccccCCccceeeeeeeEEEEEecC------cEEEEEEeccceeeeEeccCccc
Confidence            999999999999999999999999999999999999999999999999764      69999999999999999987665


Q ss_pred             CcccceEEc-CCCCchHHHHHHHHHHHHhhCCcEEEEecccCCCCCcccchHHHHHHHHHHHHhhcCCCCCCeeEEEeec
Q 007559          278 NIKPDIILS-KKDKKYEATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDL  356 (598)
Q Consensus       278 ~~kp~I~~~-~~d~~~~a~~~HF~~L~~rYG~pi~vvNLl~~~e~k~~E~~L~~~f~~~v~~ln~~lp~~~~i~y~~fD~  356 (598)
                       +-|.|.+. ..+.+..||.+||..|.++||. |+|||||+++|.   |..|+++|++++...    +....|.++.|||
T Consensus       281 -~s~kv~itR~~easq~aFdrHf~~L~~~YG~-v~IVNLLgtk~g---E~~Ls~~fk~hl~~s----~~~~dv~~t~fDy  351 (1080)
T KOG0566|consen  281 -GSHKVKITRSFEASQPAFDRHFSKLREKYGP-VYIVNLLGTKEG---EESLSEAFKRHLKLS----PIKPDVPLTNFDY  351 (1080)
T ss_pred             -ccceeEEeccchhhhHHHHHHHHHHHHhcCc-EEEEEcccCcch---HHHHHHHHHHHHhcc----CCCCCcceeEEee
Confidence             34557774 5688999999999999999995 999999998654   999999999988743    3344788999999


Q ss_pred             ccccc--ccccHHHHHHHHHHhhhhhcceeeeccCCCcccccccccccCCCCCCCcccCCCCccccccccccCCCCCCCC
Q 007559          357 QKHSR--KAINALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCIERSDDDYPQNLSHKNEDAETVDREVSSGSHVPS  434 (598)
Q Consensus       357 h~~~K--k~~nv~~~l~~ia~~~l~~~gff~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  434 (598)
                      |++++  +.+.+..++..+... +...|||+....                                             
T Consensus       352 H~~~~~~~~~~~~kL~~~i~~~-~~~~G~f~~~~~---------------------------------------------  385 (1080)
T KOG0566|consen  352 HAEVSGGKFEALHKLLYLILQD-ILEFGFFYYDIS---------------------------------------------  385 (1080)
T ss_pred             ccccccCCcchhHHHHHHHHhh-HHhcCeeeeccc---------------------------------------------
Confidence            99999  445566666666665 555798875321                                             


Q ss_pred             CCCCCccceeeeeEEeeecCccchhhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHHHHHHHhhhHhHhhhcC
Q 007559          435 ANLSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVVALGLQLKTLGLLKSPNIGLDNPLAKDLMGIYETMGDTLALQYGG  514 (598)
Q Consensus       435 ~~~~~~~~~~Q~GV~RtNClDCLDRTNv~Q~~i~~~~L~~qL~~lg~~~~~~~~~~~~~~~~l~~lw~~~GD~iS~qYaG  514 (598)
                          ....+.|+|||||||+|||||||++|..||+.+|+.||+.+++...+.  .+.++++.+..||++|||+||+.|||
T Consensus       386 ----~~~~~~Q~GVfRtNcLDCLDRTN~vQ~~Isl~~~~l~le~l~l~~~~~--~~~~f~e~~~~lWs~NGd~iskiYTG  459 (1080)
T KOG0566|consen  386 ----EGLISEQDGVFRTNCLDCLDRTNVVQSLISLEVLRLQLEDLNLNEKQS--VVDRFLEIHRTLWSNNGDSLSKIYTG  459 (1080)
T ss_pred             ----cCceeeecceEEecchhhcccchHHHHHHHHHHHHHHHHHhhcccccc--cchhHHHHHHHHHHhcchhhhhhhcc
Confidence                126889999999999999999999999999999999999999986655  56789999999999999999999999


Q ss_pred             CcccchhhhhhccccccccchHHHHHHHHHHHhhccCChhhHHHHHHHhcCcCCCCCCCcccccCCCcccc
Q 007559          515 SAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLGHFQPQQGKPALWELDSDQHHI  585 (598)
Q Consensus       515 T~A~~~~~t~r~g~~~~~~~~~D~~~S~~Ryy~N~F~D~~kQ~aInLfLG~~~p~~~~~~lw~l~~d~~lh  585 (598)
                      |+|+++.+| |       |.++|+.+|+.|.|+|||.|+.||+||||+||.+.+.+....|.|+.+.|-+|
T Consensus       460 tgAlk~s~t-r-------G~L~D~skS~~R~y~nnf~D~~kQeaIdlLLg~l~~~q~~v~L~dpv~~yv~~  522 (1080)
T KOG0566|consen  460 TGALKSSAT-R-------GKLKDASKSVTRTYQNNFMDKEKQEAIDLLLGRLPSAQSAVILYDPVHEYVLK  522 (1080)
T ss_pred             ccccccccc-c-------cchhhhhHHHHHHHhccccchhhHHHHHHHHhcCccccchhhhcCchhHHHHH
Confidence            999998887 4       56789999999999999999999999999999887656677788876665544


No 6  
>PF02383 Syja_N:  SacI homology domain;  InterPro: IPR002013 Synaptic vesicles are recycled with remarkable speed and precision in nerve terminals. A major recycling pathway involves clathrin-mediated endocytosis at endocytic zones located around sites of release. Different 'accessory' proteins linked to this pathway have been shown to alter the shape and composition of lipid membranes, to modify membrane-coat protein interactions, and to influence actin polymerisation. These include the GTPase dynamin, the lysophosphatidic acid acyl transferase endophilin, and the phosphoinositide phosphatase synaptojanin [].  The recessive suppressor of secretory defect in yeast Golgi and yeast actin function belongs to this family. This protein may be involved in the coordination of the activities of the secretory pathway and the actin cytoskeleton. Human synaptojanin which may be localised on coated endocytic intermediates in nerve terminals also belongs to this family.; GO: 0042578 phosphoric ester hydrolase activity; PDB: 3LWT_X.
Probab=100.00  E-value=2.3e-77  Score=628.68  Aligned_cols=292  Identities=38%  Similarity=0.690  Sum_probs=201.5

Q ss_pred             EEEEEEEEEEcCceEEEEEeCeeEeeEeC-CceEEEEeeeeEEecCCCCcccc------cccchhHHHHHHHhhcCCCCC
Q 007559           62 CFGIVGFIKFLEPYYMLLVTGRKKIGVIC-GHAVYSIKKSEIIPIPHSSVLSN------LAYSKNEKRYKKLLSSVDLTK  134 (598)
Q Consensus        62 ~~GilG~i~~~~~~YLivIT~~~~Vg~i~-gh~IY~I~~~~~i~i~~~~~~~~------~~~~~~E~r~~kll~~~~ls~  134 (598)
                      |+||||+|++.+++||+|||+++.||.|+ +|.||+|+++++||++.......      .....+|.+++++|+.+..++
T Consensus         1 ~~GilG~i~l~~~~yL~vIt~~~~v~~i~~~h~Iy~I~~v~~i~l~~~~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~   80 (319)
T PF02383_consen    1 CFGILGIIRLLSGPYLVVITESELVGTIPGGHDIYRITKVEFIPLPSSSSSSSLLNSEQSEQSRDEQRYLSLLKKLLSSG   80 (319)
T ss_dssp             --EEEEEEEETTEEEEEEEEEEEEEEEETT-EEEEEEEEEEEEES-TT---------------HHHHHHHHHHHHHHHH-
T ss_pred             CceEEEEEEECCCcEEEEEEecEEEEEeCCCcEEEEEeEEEEEEcCCCccccccccccccccchHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999998 59999999999999998765433      224578889999999988889


Q ss_pred             ceEEeecccccccccccccCCCC----------CCCCcccccccchhhhHHHHhhc-cCCCceeEeeeeeeEeeEEEee-
Q 007559          135 DFFFSYSYNIMNSLQKNLCNNGT----------GQSQYESMFVWNHFLTRGIRNTL-KNNQWTVALVYGFFKQENLSVA-  202 (598)
Q Consensus       135 ~FYFSytyDLT~slQ~n~~~~~~----------~~~~~~~~F~WN~~L~~~~~~~~-~~~~w~~~lI~Gfv~q~~~~~~-  202 (598)
                      +|||||+||||+++|++......          .+..++++|+||++|+++|.+.- ....||+|||||||++..+.+. 
T Consensus        81 ~fYfS~~~DLT~slQ~~~~~~~~~~~~~~~~~~~~~~~~~~F~WN~~l~~~~~~~~~~~~~~~~~iiqG~v~~~~~~~~~  160 (319)
T PF02383_consen   81 SFYFSYTYDLTNSLQRQFENNSQSSTESSSSHSLWDRADDRFFWNRHLLKPFIEFGPDLDRWCLPIIQGFVESRQIEINS  160 (319)
T ss_dssp             --EE-SSS-TTS-HHHHHHH-S------------GGGS-TTT-TTTGGGHHHHHHHGGGGGG----BSSEEEEEEEEET-
T ss_pred             CEEEECCCChhHhhcccccccccccccccccccccccCCCccCchHHHHHHHHhhCCCcccEEEEEEeeeEEEEEeeeec
Confidence            99999999999999998754321          12357899999999999997642 3689999999999999999998 


Q ss_pred             cceeEEEEEEEeeccCcCcccccccCCCCCccceeeeEeEEEEec-CCCCCCceEEEEEEEecCcceeeeecCCCCCccc
Q 007559          203 GRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVED-VPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKP  281 (598)
Q Consensus       203 g~~~~~tLISRRS~~raGtRy~~RGid~~G~VAN~VETEqIv~~~-~~~~~~~~~~SfVQiRGSVPlfWsQ~~~~l~~kp  281 (598)
                      ++.+.++||||||++||||||++||||++|+|||||||||||+.. .   ....++||||+||||||||+|+ +++.++|
T Consensus       161 ~~~~~~~lIsRrS~~r~GtRy~~RGid~~G~vANfVEtEqiv~~~~~---~~~~~~SfvqiRGSVPl~W~Q~-~~~~~~p  236 (319)
T PF02383_consen  161 GKNFQLTLISRRSCRRAGTRYNRRGIDDDGNVANFVETEQIVYIYNN---QSGHIFSFVQIRGSVPLFWSQP-PNLKYKP  236 (319)
T ss_dssp             TEEEEEEEEEEE-----SSS--SSSB-TTS--S-EEEEEEEEEEE-T-----EEEEEEEEEEE---SBS------SSS--
T ss_pred             CceEEEEEEEeEeccccccccccccccccCccceeEEEEEEEEEcCC---CCccEEEEeEecCCCCceeEcC-CCCCCCC
Confidence            999999999999999999999999999999999999999999942 1   1468999999999999999994 4677899


Q ss_pred             ceEEc-CCCCchHHHHHHHHHHHHhhCCcEEEEecccCCCCCcccchHHHHHHHHHHHHhhcCCCCCCeeEEEeeccccc
Q 007559          282 DIILS-KKDKKYEATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHS  360 (598)
Q Consensus       282 ~I~~~-~~d~~~~a~~~HF~~L~~rYG~pi~vvNLl~~~e~k~~E~~L~~~f~~~v~~ln~~lp~~~~i~y~~fD~h~~~  360 (598)
                      +|.+. ..|++++||.+||++|.++||. |+|||||++   +++|..|+++|+++++.+|+..+....|+|++||||++|
T Consensus       237 ~i~i~~~~~~~~~af~kHf~~L~~~Y~~-i~~VNLl~~---~~~E~~L~~~y~~~~~~~~~~~~~~~~i~y~~fDfh~~~  312 (319)
T PF02383_consen  237 PIKISRSSEENQPAFKKHFDELLKRYGP-IIIVNLLDK---KGSEGKLSEAYEEAVKKLNQKSPNNDKIKYIWFDFHKEC  312 (319)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHSE-EEEEEE------SS---HHHHHHHHHHHHH-------TTEEEEEE---SST
T ss_pred             CeEEEeccchhHHHHHHHHHHHHHhcCc-eEEEEcccC---CCCHHHHHHHHHHHHHHHhccccCcCCCcEEEeChhHHh
Confidence            99887 6789999999999999999984 999999965   456999999999999999887777889999999999999


Q ss_pred             c
Q 007559          361 R  361 (598)
Q Consensus       361 K  361 (598)
                      |
T Consensus       313 k  313 (319)
T PF02383_consen  313 K  313 (319)
T ss_dssp             T
T ss_pred             c
Confidence            9


No 7  
>PF15214 PXT1:  Peroxisomal testis-specific protein 1
Probab=34.00  E-value=12  Score=28.27  Aligned_cols=10  Identities=40%  Similarity=0.836  Sum_probs=8.1

Q ss_pred             cccccchhhh
Q 007559          164 SMFVWNHFLT  173 (598)
Q Consensus       164 ~~F~WN~~L~  173 (598)
                      -+|+||.||+
T Consensus        42 LrFfwnnhll   51 (51)
T PF15214_consen   42 LRFFWNNHLL   51 (51)
T ss_pred             hhhhhhcccC
Confidence            3899999874


No 8  
>PF09547 Spore_IV_A:  Stage IV sporulation protein A (spore_IV_A);  InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species. 
Probab=30.54  E-value=1.4e+02  Score=33.21  Aligned_cols=69  Identities=22%  Similarity=0.260  Sum_probs=50.9

Q ss_pred             cccceE-EcCCCCchHHHHHHHHHHHHhhCCcEEEEecccCCCCCcccchHHHHHHHHHHHHhhcCCCCCCeeEEEeecc
Q 007559          279 IKPDII-LSKKDKKYEATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQ  357 (598)
Q Consensus       279 ~kp~I~-~~~~d~~~~a~~~HF~~L~~rYG~pi~vvNLl~~~e~k~~E~~L~~~f~~~v~~ln~~lp~~~~i~y~~fD~h  357 (598)
                      .||=|+ +...+|+.+.+..--.+|.++|+.||+.||...-+     |..+..-+++++-        +..|.=+.|++.
T Consensus       180 gKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlpvnc~~l~-----~~DI~~Il~~vLy--------EFPV~Ei~~~lP  246 (492)
T PF09547_consen  180 GKPFVILLNSTKPYSEETQELAEELEEKYDVPVLPVNCEQLR-----EEDITRILEEVLY--------EFPVSEININLP  246 (492)
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEEeehHHcC-----HHHHHHHHHHHHh--------cCCceEEEeecc
Confidence            477654 46678999999999999999999999999998754     5566666666542        234667777777


Q ss_pred             ccc
Q 007559          358 KHS  360 (598)
Q Consensus       358 ~~~  360 (598)
                      +-.
T Consensus       247 ~Wv  249 (492)
T PF09547_consen  247 KWV  249 (492)
T ss_pred             hHH
Confidence            644


No 9  
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.46  E-value=97  Score=37.40  Aligned_cols=39  Identities=26%  Similarity=0.434  Sum_probs=35.4

Q ss_pred             EcCceEEEEEeCeeEeeEeCCceEEEEeee--eEEecCCCC
Q 007559           71 FLEPYYMLLVTGRKKIGVICGHAVYSIKKS--EIIPIPHSS  109 (598)
Q Consensus        71 ~~~~~YLivIT~~~~Vg~i~gh~IY~I~~~--~~i~i~~~~  109 (598)
                      +.+..+++.||.+..|+.|.+-.||+|+.+  +||++....
T Consensus        78 i~g~~~l~~V~~~~sv~ki~~vdf~~l~~~~~dFi~l~~~~  118 (1080)
T KOG0566|consen   78 ISGVSFLAQVTGSESVGKIEDVDFYSLTNTVWDFISLERSS  118 (1080)
T ss_pred             eccceEEEEecCCceeccccceeEEEeccchhhheecccCC
Confidence            457789999999999999999999999999  999998664


No 10 
>PHA02762 hypothetical protein; Provisional
Probab=20.15  E-value=1.2e+02  Score=23.60  Aligned_cols=35  Identities=11%  Similarity=0.371  Sum_probs=26.2

Q ss_pred             eecceeEEEEEEEeecc--CcCcccccccCCCCCccc
Q 007559          201 VAGRDFKFTLIARRSRH--YAGTRYLKRGVNEKGRVA  235 (598)
Q Consensus       201 ~~g~~~~~tLISRRS~~--raGtRy~~RGid~~G~VA  235 (598)
                      +.+.--.+.++-.||-.  +-|--|..=|||++|+.|
T Consensus         5 idn~fgnlii~~~rs~~ks~eg~afvtigide~g~ia   41 (62)
T PHA02762          5 IDNDFGNLIIEFKRNVEKSFEGEAFVTIGIDENDKIS   41 (62)
T ss_pred             ecCCCccEEEEEecCccccccccEEEEEeECCCCcEE
Confidence            33444456666678765  678999999999999986


Done!