BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>007562
MYCLRFVWIHCRYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQ
YDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLA
LHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKG
RCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLHPTHVFSNFRKFYGTTYESK
AAYPSFEDSSRIALGNILKFRKKNWQFDFIGGIVYFVLVFSMFPQCELNHILREDSFSGH
LRSFFGTVWNAFMYVLEHSYVSFAGALLLLIVAITFVPSKLSRKKRAMIGVLHVSAHLAA
ALILMLLLELGVETCIQHKLLATSGYHTLYQWYRSVESEHFPDPTGLRARIEQWTFGLYP
ACIKYLMSAFDIPEVMAVTRSNICKNGMQSLSRGGAVIYYASVFLYFWVFSTPVVSLVLG
SYLYICVNWLHLHFDEAFSSLRIANYKAFTRFHINHDGDLEVYTLAVDKVPKEWELDPDW
DGELKQPQQLSHLRRFPSKWRAASAHQDPLNTVKIIDHFVIQQTEKPDLGASNRSVTC

High Scoring Gene Products

Symbol, full name Information P value
AT4G23000 protein from Arabidopsis thaliana 1.3e-260

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  007562
        (598 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2127148 - symbol:AT4G23000 "AT4G23000" species...  2508  1.3e-260  1


>TAIR|locus:2127148 [details] [associations]
            symbol:AT4G23000 "AT4G23000" species:3702 "Arabidopsis
            thaliana" [GO:0004722 "protein serine/threonine phosphatase
            activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016036
            "cellular response to phosphate starvation" evidence=RCA]
            [GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR004843 Pfam:PF00149 EMBL:CP002687
            GO:GO:0016787 IPI:IPI00516675 RefSeq:NP_194031.5 UniGene:At.54483
            ProteinModelPortal:F4JMQ8 PRIDE:F4JMQ8 EnsemblPlants:AT4G23000.1
            GeneID:828399 KEGG:ath:AT4G23000 OMA:WVIYGEL ArrayExpress:F4JMQ8
            Uniprot:F4JMQ8
        Length = 1015

 Score = 2508 (887.9 bits), Expect = 1.3e-260, P = 1.3e-260
 Identities = 446/580 (76%), Positives = 502/580 (86%)

Query:    13 YPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGN 72
             YPNPSAFTYE+RLF PFEYALQPP WYK D ++VNKPE+P GV +LK YDGPQC++IPGN
Sbjct:   437 YPNPSAFTYEKRLFCPFEYALQPPHWYKTDSISVNKPELPDGVSDLKHYDGPQCFLIPGN 496

Query:    73 HDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHCDIDVYQFKF 132
             HDWFDGLNTFMR++CHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALH DIDVYQF F
Sbjct:   497 HDWFDGLNTFMRYVCHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHGDIDVYQFNF 556

Query:   133 FAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 192
             F++LVKE+VGE D+VII+THEPNWLLDWY+ + +GKN++HLI ++LKGRCKLR+AGD+HH
Sbjct:   557 FSKLVKEKVGENDAVIIITHEPNWLLDWYWKDDTGKNMRHLIFEFLKGRCKLRMAGDLHH 616

Query:   193 YMRHSYVPSDGPVYVQHLLVNGCGGAFLHPTHVFSNFRKFYGTTYESKAAYPSFEDSSRI 252
             YMRHS   SDGPV+V HLLVNGCGGAFLHPTHVF  F KFYG +YESK+AYPSFEDSSRI
Sbjct:   617 YMRHSCTQSDGPVHVPHLLVNGCGGAFLHPTHVFRCFSKFYGASYESKSAYPSFEDSSRI 676

Query:   253 ALGNILKFRKKNWQFDFIGGIVYFVLVFSMFPQCELNHILREDSFSGHLRSFFGTVWNAF 312
             ALGNILKFRKKNWQFDFIGGI+YF+LVFS+FPQCEL HILR DSFSGHL SFFGTVW++F
Sbjct:   677 ALGNILKFRKKNWQFDFIGGIIYFLLVFSLFPQCELGHILRGDSFSGHLGSFFGTVWSSF 736

Query:   313 MYVLEHSYVSFAGALLLLIVAITFVPSKLSRKKRAMIGXXXXXXXXXXXXXXXXXXXXGV 372
             +YV E SYVSF G L+LLI AI FVPSK+SR+KR +IG                    G+
Sbjct:   737 VYVTEQSYVSFTGVLMLLITAIMFVPSKISRRKRLLIGILHVSAHLMAALILMLLLELGI 796

Query:   373 ETCIQHKLLATSGYHTLYQWYRSVESEHFPDPTGLRARIEQWTFGLYPACIKYLMSAFDI 432
             E CIQHKLLA SGYHTLYQWY+SVE+EHFPDPTGLR RIEQWTFGLYPACIKYLMSAFDI
Sbjct:   797 EICIQHKLLANSGYHTLYQWYKSVENEHFPDPTGLRDRIEQWTFGLYPACIKYLMSAFDI 856

Query:   433 PEVMAVTRSNICKNGMQSLSRGGAVIYYASVFLYFWVFSTPVVSLVLGSYLYICVNWLHL 492
             PEVMAVTR+NIC+ GM+SLSR GA IYYASVFLYFWVFSTPVVSLV GSYLYI +NWLH+
Sbjct:   857 PEVMAVTRTNICREGMESLSRSGAAIYYASVFLYFWVFSTPVVSLVFGSYLYISINWLHI 916

Query:   493 HFDEAFSSLRIANYKAFTRFHINHDGDLEVYTLAVDKVPKEWELDPDWDGELKQPQQLSH 552
             HFDEAFSSLRIANYK+FTRFHI  DGDLEV+TL VDKVPKEW+LD DWD E +   ++SH
Sbjct:   917 HFDEAFSSLRIANYKSFTRFHIKPDGDLEVFTLGVDKVPKEWKLDKDWDAEPRSTVKMSH 976

Query:   553 LRRFPSKWRAASAHQDPLNTVKIIDHFVIQQTEKPDLGAS 592
              RRFPSKW A +  QDP+NTVKI+D FVI ++EK + G S
Sbjct:   977 HRRFPSKWCATTLQQDPVNTVKIVDKFVIHRSEK-ETGGS 1015


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.141   0.472    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      598       578   0.00081  120 3  11 22  0.46    33
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  412 KB (2196 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  46.36u 0.10s 46.46t   Elapsed:  00:00:02
  Total cpu time:  46.36u 0.10s 46.46t   Elapsed:  00:00:02
  Start:  Thu May  9 21:35:40 2013   End:  Thu May  9 21:35:42 2013

Back to top