Query 007562
Match_columns 598
No_of_seqs 170 out of 217
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 04:52:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007562.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007562hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tgh_A Glideosome-associated p 99.7 2.4E-17 8.3E-22 172.3 13.0 179 4-220 37-257 (342)
2 1xzw_A Purple acid phosphatase 99.7 8.1E-17 2.8E-21 170.3 15.0 152 63-220 192-365 (426)
3 1ute_A Protein (II purple acid 99.7 3E-17 1E-21 161.8 9.1 177 4-219 46-245 (313)
4 2qfp_A Purple acid phosphatase 99.6 7.3E-16 2.5E-20 162.7 12.6 152 63-220 185-358 (424)
5 3d03_A Phosphohydrolase; glyce 99.6 2.1E-14 7.1E-19 139.8 14.9 138 62-218 71-217 (274)
6 2nxf_A Putative dimetal phosph 99.5 2.8E-14 9.5E-19 140.8 10.9 147 62-216 87-286 (322)
7 3ib7_A ICC protein; metallopho 99.5 2.2E-13 7.5E-18 136.3 12.9 136 63-218 101-241 (330)
8 2xmo_A LMO2642 protein; phosph 99.5 5.7E-13 1.9E-17 140.6 16.4 132 65-197 127-289 (443)
9 2yeq_A Apased, PHOD, alkaline 98.9 1.8E-08 6.3E-13 110.7 16.4 98 99-198 258-389 (527)
10 1uf3_A Hypothetical protein TT 98.8 2.5E-09 8.7E-14 100.8 6.0 116 63-191 64-190 (228)
11 2yvt_A Hypothetical protein AQ 98.6 8.8E-08 3E-12 92.8 7.5 117 65-191 91-222 (260)
12 2q8u_A Exonuclease, putative; 98.4 4.9E-07 1.7E-11 92.5 7.3 126 63-196 97-235 (336)
13 3rl5_A Metallophosphoesterase 98.0 2E-05 6.8E-10 81.2 9.9 126 62-194 109-259 (296)
14 3tho_B Exonuclease, putative; 98.0 4.5E-05 1.5E-09 80.0 12.3 127 63-196 79-217 (379)
15 3av0_A DNA double-strand break 97.9 3.1E-05 1.1E-09 81.1 9.3 113 65-194 97-211 (386)
16 1ii7_A MRE11 nuclease; RAD50, 97.7 0.00016 5.5E-09 73.9 11.4 120 63-196 76-213 (333)
17 1nnw_A Hypothetical protein; s 97.5 3.6E-05 1.2E-09 74.7 3.4 70 124-195 109-181 (252)
18 1xm7_A Hypothetical protein AQ 97.1 0.00054 1.8E-08 64.5 6.4 50 144-196 105-154 (195)
19 1hp1_A 5'-nucleotidase; metall 96.8 0.0067 2.3E-07 65.8 11.7 126 66-195 85-233 (516)
20 1s3l_A Hypothetical protein MJ 96.7 0.0013 4.3E-08 62.6 4.8 38 144-196 114-152 (190)
21 3rqz_A Metallophosphoesterase; 96.7 0.0004 1.4E-08 67.9 1.0 64 123-193 91-154 (246)
22 1z2w_A Vacuolar protein sortin 96.6 0.0053 1.8E-07 57.8 8.3 15 180-194 116-130 (192)
23 3ck2_A Conserved uncharacteriz 96.4 0.0037 1.3E-07 57.9 5.5 43 145-195 77-119 (176)
24 2a22_A Vacuolar protein sortin 96.2 0.0016 5.3E-08 62.8 1.9 43 144-194 112-154 (215)
25 2z1a_A 5'-nucleotidase; metal- 95.9 0.03 1E-06 61.5 11.0 113 66-195 109-244 (552)
26 4fbk_A DNA repair and telomere 94.6 0.018 6.2E-07 62.9 3.8 119 64-196 184-316 (472)
27 2kkn_A Uncharacterized protein 94.6 0.0087 3E-07 56.3 1.1 16 179-194 126-141 (178)
28 3t1i_A Double-strand break rep 94.6 0.14 4.8E-06 55.2 10.6 45 143-196 228-272 (431)
29 3qfk_A Uncharacterized protein 94.4 0.22 7.6E-06 54.2 11.9 127 67-195 104-253 (527)
30 2wdc_A SOXB, sulfur oxidation 94.4 0.23 7.7E-06 55.0 12.1 111 68-196 160-293 (562)
31 4fbw_A DNA repair protein RAD3 94.3 0.018 6.3E-07 61.8 2.8 120 63-196 120-253 (417)
32 3ive_A Nucleotidase; structura 94.0 0.34 1.2E-05 52.6 12.1 126 66-195 87-239 (509)
33 4h2g_A 5'-nucleotidase; dimer, 93.0 0.085 2.9E-06 57.9 5.3 114 67-194 109-245 (546)
34 3ztv_A NAD nucleotidase, NADN; 91.5 0.82 2.8E-05 50.6 11.0 112 67-194 97-231 (579)
35 3c9f_A 5'-nucleotidase; 2',3'- 88.6 1.4 4.7E-05 48.8 9.7 117 67-193 98-242 (557)
36 1t71_A Phosphatase, conserved 83.5 8 0.00027 39.3 11.5 108 69-193 68-187 (281)
37 1t70_A Phosphatase; crystal, X 83.5 8.5 0.00029 38.6 11.6 110 66-192 60-176 (255)
38 2z06_A Putative uncharacterize 82.6 12 0.00042 37.5 12.3 111 64-192 58-173 (252)
39 3jyf_A 2',3'-cyclic nucleotide 82.6 5.6 0.00019 41.2 10.1 120 67-194 96-247 (339)
40 3qfm_A SAPH, putative uncharac 80.9 2.3 7.8E-05 42.2 6.3 68 123-192 106-175 (270)
41 3gve_A YFKN protein; alpha-bet 80.6 8.4 0.00029 39.8 10.6 120 67-194 103-254 (341)
42 1su1_A Hypothetical protein YF 72.8 1.4 4.7E-05 42.0 1.9 35 144-193 121-155 (208)
43 4h1s_A 5'-nucleotidase; hydrol 72.7 24 0.00084 38.1 12.0 110 67-193 87-222 (530)
44 3qfm_A SAPH, putative uncharac 47.0 5 0.00017 39.8 0.7 12 65-76 67-78 (270)
45 1g5b_A Serine/threonine protei 43.2 7.9 0.00027 36.5 1.4 14 181-194 178-191 (221)
46 2qjc_A Diadenosine tetraphosph 26.8 14 0.00049 36.2 0.2 11 66-76 75-85 (262)
47 3ec2_A DNA replication protein 24.8 1E+02 0.0035 27.4 5.5 43 114-156 103-145 (180)
No 1
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=99.72 E-value=2.4e-17 Score=172.32 Aligned_cols=179 Identities=11% Similarity=0.037 Sum_probs=117.5
Q ss_pred eeeeeceeeecCCChhhHHhhhcchhhhhcCCCCCCCCCccccCCCCCCCCCcccccCCCCeEEecCCCCCCCCChHHHH
Q 007562 4 LRFVWIHCRYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFM 83 (598)
Q Consensus 4 ~~~~~gDlvYp~~s~~~Y~~rf~~Py~~Al~~~~~~~~~~i~~~~p~~p~~~~~~~~~~~p~~~~~~gnhd~~~gL~aF~ 83 (598)
|-++|||++|. +.......+|.+-|+..+... + .....| +++|+|||||+.+..++.
T Consensus 37 ~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~-------------~--------~~~~~P-~~~vlGNHD~~~~~~aq~ 93 (342)
T 3tgh_A 37 FIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEE-------------K--------GDMYMP-FFTVLGTRDWTGNYNAQL 93 (342)
T ss_dssp EEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCG-------------G--------GTTCSE-EEECCCHHHHTSCHHHHH
T ss_pred EEEECCCcccC-CCCcCccHHHHHHHHHHhhhh-------------h--------hhhCCC-EEEeCCCCccCCCchHhh
Confidence 45789999999 553223334444444322110 0 012345 999999999999988887
Q ss_pred Hhhc----c------------cCCCCcccCCCCCceEEE----ECC-------C-----cEEEEEeecccCCC-------
Q 007562 84 RFIC----H------------KSWLGGWFMPQKKSYFAL----QLP-------K-----GWWVFGLDLALHCD------- 124 (598)
Q Consensus 84 r~F~----~------------~~~l~gw~~~Q~~sYfAl----~Lp-------~-----~wwLiGLDsql~g~------- 124 (598)
.+-. . +.....|.+|. .||+. +++ . .+.++.||++....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~ 171 (342)
T 3tgh_A 94 LKGQGIYIEKNGETSIEKDADATNYPKWIMPN--YWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKI 171 (342)
T ss_dssp HHHHC---------------CCCSSCEEECSS--SSEEEEEEEEEC---------CEEEEEEEEECCTTTTSTTCSCHHH
T ss_pred hhhhcccccccccccccccccccCCCCccCCc--ceEEEEEEeeccccccccccCCCCceEEEEEEeCcccccCCccccc
Confidence 7532 0 22355687664 47764 222 1 28999999975431
Q ss_pred ---CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCcceeecCC
Q 007562 125 ---IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPS 201 (598)
Q Consensus 125 ---id~~Q~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R~~~~~~ 201 (598)
..+.|++||++.|++ .+.+|++.|+|.|..+...+. ....+.|+..+.+++|+++||||+|.|+|..+.
T Consensus 172 ~~~~~~~Ql~WLe~~L~~----~~~~IV~~HhP~~~~~~~~~~--~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~~-- 243 (342)
T 3tgh_A 172 HEKAWNDLKSQLSVAKKI----ADFIIVVGDQPIYSSGYSRGS--SYLAYYLLPLLKDAEVDLYISGHDNNMEVIEDN-- 243 (342)
T ss_dssp HHHHHHHHHHHHHHHHHH----CSEEEEECSSCSSCSSTTCCC--HHHHHHTHHHHHHTTCCEEEECSSSSEEEEEET--
T ss_pred chHHHHHHHHHHHHhhcc----CCcEEEEECCCCCCCCCCCCc--HHHHHHHHHHHHHcCCCEEEECCCcceeEEeeC--
Confidence 123899999999943 479999999999988653221 111223433344789999999999999998754
Q ss_pred CCCcccceEEEecCCCccc
Q 007562 202 DGPVYVQHLLVNGCGGAFL 220 (598)
Q Consensus 202 ~g~~~~~~lIVsGGGGAfL 220 (598)
+ .++||+|+||...
T Consensus 244 -g----~~~iv~Ga~g~~~ 257 (342)
T 3tgh_A 244 -D----MAHITCGSGSMSQ 257 (342)
T ss_dssp -T----EEEEEECCSSCCC
T ss_pred -C----cEEEEeCcccccc
Confidence 3 5789999988643
No 2
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=99.70 E-value=8.1e-17 Score=170.34 Aligned_cols=152 Identities=16% Similarity=0.143 Sum_probs=99.9
Q ss_pred CCeEEecCCCCCCCCCh--------HHHHHhhcccCCCCcccCCCCCceEEEECCCcEEEEEeecccCCCCCHHHHHHHH
Q 007562 63 GPQCYIIPGNHDWFDGL--------NTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFA 134 (598)
Q Consensus 63 ~p~~~~~~gnhd~~~gL--------~aF~r~F~~~~~l~gw~~~Q~~sYfAl~Lp~~wwLiGLDsql~g~id~~Q~~wf~ 134 (598)
.| +++++||||+.... ..|...|.-+... .......||+++.+. +.+++||+........+|++||+
T Consensus 192 ~P-~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~---~~~~~~~~ys~~~g~-~~~i~Ldt~~~~~~~~~Q~~WL~ 266 (426)
T 1xzw_A 192 QP-WIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEA---SGSGDPLWYAIKRAS-AHIIVLSSYSGFVKYSPQYKWFT 266 (426)
T ss_dssp SC-EECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGG---GTCSSTTSEEEEETT-EEEEECCTTSCCSTTSHHHHHHH
T ss_pred CC-EEEeccccccccCCccccccCChhheEEEeCCccc---CCCCCCCeEEEEECC-EEEEEeeCcccCCCCHHHHHHHH
Confidence 46 99999999987532 2333333111000 012356788999986 99999999765555689999999
Q ss_pred HHHHhhc-CCCCeEEEEecCCCccccccccCCCccchHHHHHhhh-CCceeEEEcCccCCCcceeecCCC------C---
Q 007562 135 ELVKEQV-GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSD------G--- 203 (598)
Q Consensus 135 ~~l~~~~-~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l-~~rV~L~LSGH~HhY~R~~~~~~~------g--- 203 (598)
+.|++.- .....+|+++|+|.+..+..+... ...+++.+..++ +++|+|+|+||+|.|+|..+.... |
T Consensus 267 ~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~-~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~ 345 (426)
T 1xzw_A 267 SELEKVNRSETPWLIVLVHAPLYNSYEAHYME-GEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCT 345 (426)
T ss_dssp HHHHHCCTTTCCEEEEECSSCSSCCBSTTTTT-THHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCC
T ss_pred HHHHhhhhcCCCEEEEEeccCceeCCCcccCC-CHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccc
Confidence 9997522 233469999999999765422111 122333333333 789999999999999998653210 0
Q ss_pred ---CcccceEEEecCCCccc
Q 007562 204 ---PVYVQHLLVNGCGGAFL 220 (598)
Q Consensus 204 ---~~~~~~lIVsGGGGAfL 220 (598)
......+||+|+||+..
T Consensus 346 ~~~~~~g~~yi~~G~gG~~~ 365 (426)
T 1xzw_A 346 PVSDESAPVYITIGDGGNSE 365 (426)
T ss_dssp CEECTTSCEEEEECCSCCTT
T ss_pred cccCCCccEEEEeCCCcccc
Confidence 01246799999999743
No 3
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.69 E-value=3e-17 Score=161.77 Aligned_cols=177 Identities=18% Similarity=0.282 Sum_probs=112.5
Q ss_pred eeeeeceeeecCCChhhHHhhhcchhhhhcCCCCCCCCCccccCCCCCCCCCcccccC-CCCeEEecCCCCCCCCChHHH
Q 007562 4 LRFVWIHCRYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQY-DGPQCYIIPGNHDWFDGLNTF 82 (598)
Q Consensus 4 ~~~~~gDlvYp~~s~~~Y~~rf~~Py~~Al~~~~~~~~~~i~~~~p~~p~~~~~~~~~-~~p~~~~~~gnhd~~~gL~aF 82 (598)
+-+++||++|..+.......++.+-|+..+.. ... +.| +++||||||++.+....
T Consensus 46 ~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~-----------------------~~l~~~p-~~~v~GNHD~~~~~~~~ 101 (313)
T 1ute_A 46 FILSLGDNFYFTGVHDAKDKRFQETFEDVFSD-----------------------PSLRNVP-WHVLAGNHDHLGNVSAQ 101 (313)
T ss_dssp EEEECSCCSTTTCCSSTTCTHHHHHTTTTSCS-----------------------GGGTTCC-EEECCCHHHHHSCHHHH
T ss_pred EEEECCCccCcCCCCCcchHHHHHHHHHHcCc-----------------------hhhcCCC-EEEECCCCccCCCcccc
Confidence 45789999998765433333444444432210 012 346 99999999998775544
Q ss_pred HHhhcccCCCCcccCCCCCceEEEEC--CC---cEEEEEeeccc-----------------CCCCCHHHHHHHHHHHHhh
Q 007562 83 MRFICHKSWLGGWFMPQKKSYFALQL--PK---GWWVFGLDLAL-----------------HCDIDVYQFKFFAELVKEQ 140 (598)
Q Consensus 83 ~r~F~~~~~l~gw~~~Q~~sYfAl~L--p~---~wwLiGLDsql-----------------~g~id~~Q~~wf~~~l~~~ 140 (598)
..+.. ....|..+ ..||..+. |. ++.+++||+.. .+.+...|++||++.+++
T Consensus 102 ~~~~~---~~~~~~~~--~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~- 175 (313)
T 1ute_A 102 IAYSK---ISKRWNFP--SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA- 175 (313)
T ss_dssp HHGGG---TSTTEECC--SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHH-
T ss_pred ccccc---cCCCccCc--ccceEEEEecCCCCceEEEEEEEChHHhCcCccccccccCCccccchHHHHHHHHHHHHHh-
Confidence 33211 12334433 34666554 43 69999999865 223456899999999975
Q ss_pred cCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCCcc
Q 007562 141 VGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAF 219 (598)
Q Consensus 141 ~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R~~~~~~~g~~~~~~lIVsGGGGAf 219 (598)
.+++++|+++|+|.+..+..... ....+.+.+.+.+++|+++|+||+|.+++..... + .++|++|+||..
T Consensus 176 -~~~~~~iv~~H~p~~~~~~~~~~--~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~--g----~~~i~~gs~~~~ 245 (313)
T 1ute_A 176 -AKEDYVLVAGHYPVWSIAEHGPT--HCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDEN--G----LGFVLSGAGNFM 245 (313)
T ss_dssp -CCCSEEEEECSSCSSCCSSSCCC--HHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTT--C----CEEEEECBSSCC
T ss_pred -CCCCeEEEEECCCCccCCCCCCc--HHHHHHHHHHHHHcCCcEEEECChhhhhhccCCC--C----ceEEEECCCcCc
Confidence 34589999999999987542211 1112223333335789999999999988876331 3 478999998863
No 4
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=99.64 E-value=7.3e-16 Score=162.73 Aligned_cols=152 Identities=14% Similarity=0.165 Sum_probs=97.3
Q ss_pred CCeEEecCCCCCCCCCh--------HHHHHhhcccCCCCcccCCCCCceEEEECCCcEEEEEeecccCCCCCHHHHHHHH
Q 007562 63 GPQCYIIPGNHDWFDGL--------NTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFA 134 (598)
Q Consensus 63 ~p~~~~~~gnhd~~~gL--------~aF~r~F~~~~~l~gw~~~Q~~sYfAl~Lp~~wwLiGLDsql~g~id~~Q~~wf~ 134 (598)
.| +++++||||+.... ..|...|.-+.. + .......||+++.+ ++.+++||+........+|++||+
T Consensus 185 ~P-~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~--~-~~~~~~~~ys~~~g-~~~~i~Ldt~~~~~~~~~Q~~WL~ 259 (424)
T 2qfp_A 185 QP-WIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYE--A-SQSTSPFWYSIKRA-SAHIIVLSSYSAYGRGTPQYTWLK 259 (424)
T ss_dssp SC-EEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGG--G-GTCSSTTSEEEEET-TEEEEECCTTSCCSTTSHHHHHHH
T ss_pred CC-eEeecCCcccccCCcccccccchhhhhhccCCcc--c-cCCCCCcEEEEEEC-CEEEEEecCCccCCCcHHHHHHHH
Confidence 36 99999999986431 233333311100 0 01235678899998 599999999764333358999999
Q ss_pred HHHHhhcC-CCCeEEEEecCCCccccccccCCCccchHHHHHhhh-CCceeEEEcCccCCCcceeecCC------CC---
Q 007562 135 ELVKEQVG-ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPS------DG--- 203 (598)
Q Consensus 135 ~~l~~~~~-~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l-~~rV~L~LSGH~HhY~R~~~~~~------~g--- 203 (598)
+.|++.-+ ....+|++.|+|.+..+..+.. .+..++..+..++ +++|+|+|+||+|.|+|..+... .+
T Consensus 260 ~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~-~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~ 338 (424)
T 2qfp_A 260 KELRKVKRSETPWLIVLMHSPLYNSYNHHFM-EGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCT 338 (424)
T ss_dssp HHHHHCCTTTCCEEEEECSSCSSCCBSTTTT-TTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCS
T ss_pred HHHhhhcccCCCEEEEEeCcCceecCccccc-ccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccc
Confidence 99975221 2457999999999986432110 1122333333333 68999999999999999865321 01
Q ss_pred ---CcccceEEEecCCCccc
Q 007562 204 ---PVYVQHLLVNGCGGAFL 220 (598)
Q Consensus 204 ---~~~~~~lIVsGGGGAfL 220 (598)
....+.+||+|+||+-.
T Consensus 339 ~~~~~~~~vyi~~G~gg~~~ 358 (424)
T 2qfp_A 339 PVKDQSAPVYITIGDAGNYG 358 (424)
T ss_dssp CEECTTSCEEEEECCSCTTS
T ss_pred cccCCCCcEEEEecCCCCcc
Confidence 01245789999999743
No 5
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.57 E-value=2.1e-14 Score=139.79 Aligned_cols=138 Identities=15% Similarity=0.098 Sum_probs=90.0
Q ss_pred CCCeEEecCCCCCCCCChHHHHHhhcccCCCCccc-CCC--CCceEEEECCCcEEEEEeeccc----CCCCCHHHHHHHH
Q 007562 62 DGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWF-MPQ--KKSYFALQLPKGWWVFGLDLAL----HCDIDVYQFKFFA 134 (598)
Q Consensus 62 ~~p~~~~~~gnhd~~~gL~aF~r~F~~~~~l~gw~-~~Q--~~sYfAl~Lp~~wwLiGLDsql----~g~id~~Q~~wf~ 134 (598)
+.| +++||||||++.. +.+.|... |. ... ...|+.++.+. +.++|||+.. .+.+++.|++|++
T Consensus 71 ~~p-~~~v~GNHD~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~i~ld~~~~~~~~~~~~~~~~~wl~ 140 (274)
T 3d03_A 71 NYP-LYLIPGNHDDKAL---FLEYLQPL-----CPQLGSDANNMRCAVDDFA-TRLLFIDSSRAGTSKGWLTDETISWLE 140 (274)
T ss_dssp SSC-EEEECCTTSCHHH---HHHHHGGG-----SGGGCSCGGGCCEEECSSS-SEEEECCCCCTTCSSBCCCHHHHHHHH
T ss_pred CCC-EEEECCCCCCHHH---HHHHhhhh-----hcCcccCCCceEEEEEeCC-EEEEEEeCCCCCCCCCeeCHHHHHHHH
Confidence 346 9999999998644 33333321 21 011 23467888875 9999999975 4567889999999
Q ss_pred HHHHhhcCCCCeEEEEecCCCccccccccC-CCccchHHHHHhhhCC-ceeEEEcCccCCCcceeecCCCCCcccceEEE
Q 007562 135 ELVKEQVGERDSVIIMTHEPNWLLDWYFNN-VSGKNVKHLICDYLKG-RCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLV 212 (598)
Q Consensus 135 ~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~-~~~~~v~~Li~~~l~~-rV~L~LSGH~HhY~R~~~~~~~g~~~~~~lIV 212 (598)
+.+++. +++++|+++|+|.+..+....+ ....+...+.+.+.++ +++++++||+|.++..... + .++++
T Consensus 141 ~~l~~~--~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~---g----~~~~~ 211 (274)
T 3d03_A 141 AQLFEG--GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYR---Q----ALIST 211 (274)
T ss_dssp HHHHHH--TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEET---T----EEEEE
T ss_pred HHHHhC--CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheEC---C----EEEEE
Confidence 999763 5689999999999876432211 1112233343333345 7999999999987665432 2 24667
Q ss_pred ecCCCc
Q 007562 213 NGCGGA 218 (598)
Q Consensus 213 sGGGGA 218 (598)
++|.+.
T Consensus 212 ~pg~~~ 217 (274)
T 3d03_A 212 LPGTVH 217 (274)
T ss_dssp CCCSSC
T ss_pred cCCcce
Confidence 665543
No 6
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.52 E-value=2.8e-14 Score=140.84 Aligned_cols=147 Identities=12% Similarity=0.048 Sum_probs=93.0
Q ss_pred CCCeEEecCCCCCCCC-ChHHHHHhhcccCC----CCcccCC-CCCceEEEECCCcEEEEEeecccC-------------
Q 007562 62 DGPQCYIIPGNHDWFD-GLNTFMRFICHKSW----LGGWFMP-QKKSYFALQLPKGWWVFGLDLALH------------- 122 (598)
Q Consensus 62 ~~p~~~~~~gnhd~~~-gL~aF~r~F~~~~~----l~gw~~~-Q~~sYfAl~Lp~~wwLiGLDsql~------------- 122 (598)
+.| ++.+|||||++. +.+.|.+.+..... ..+...+ ....||..+...++.+++||+...
T Consensus 87 ~~p-~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~ 165 (322)
T 2nxf_A 87 SVD-VHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHT 165 (322)
T ss_dssp CSE-EEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHHH
T ss_pred CCc-EEEecCCCCcccCCHHHHhhhhCCcccccccccccccCCCCceEEEEecCCCEEEEEEcCceecccccCCCChhhH
Confidence 345 999999999863 34455555443210 0111112 345788998744599999998642
Q ss_pred ---------------------------------CCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCCCccc
Q 007562 123 ---------------------------------CDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKN 169 (598)
Q Consensus 123 ---------------------------------g~id~~Q~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~ 169 (598)
+.+...|++||++.+++....+.++|+++|+|.+....... ...++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~~~~-~~~~~ 244 (322)
T 2nxf_A 166 HSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPI-CLAWN 244 (322)
T ss_dssp HHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCGG-GSCTT
T ss_pred HHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcCCcEEEEEccCCCCCCCCcc-ccccC
Confidence 34568999999999875333367999999999987643211 11223
Q ss_pred hHHHHHhhhCC-ceeEEEcCccCCCcceeecCCCCCcccceEEEecCC
Q 007562 170 VKHLICDYLKG-RCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCG 216 (598)
Q Consensus 170 v~~Li~~~l~~-rV~L~LSGH~HhY~R~~~~~~~g~~~~~~lIVsGGG 216 (598)
.+.+.+.+.++ +|+++|+||+|.+.+.... ++ .++|++|+.
T Consensus 245 ~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~--~g----~~~i~~~~~ 286 (322)
T 2nxf_A 245 HEAVLSVLRSHQSVLCFIAGHDHDGGRCTDS--SG----AQHITLEGV 286 (322)
T ss_dssp HHHHHHHHHTCTTEEEEEECSCTTCEEEECT--TS----CEEEECCCG
T ss_pred HHHHHHHHhcCCCeEEEEcCCcCCCCceecc--CC----ceEEEecch
Confidence 33443333355 6999999999999887611 13 356666544
No 7
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.47 E-value=2.2e-13 Score=136.32 Aligned_cols=136 Identities=18% Similarity=0.155 Sum_probs=90.7
Q ss_pred CCeEEecCCCCCCCCChHHHHHhhcccCCCCcccCCCCCceEEEECCCcEEEEEeeccc----CCCCCHHHHHHHHHHHH
Q 007562 63 GPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLAL----HCDIDVYQFKFFAELVK 138 (598)
Q Consensus 63 ~p~~~~~~gnhd~~~gL~aF~r~F~~~~~l~gw~~~Q~~sYfAl~Lp~~wwLiGLDsql----~g~id~~Q~~wf~~~l~ 138 (598)
.| +++||||||++. .|.+.+..... .....|+.++.+. +.+++||+.. .+.++..|++|+++.++
T Consensus 101 ~p-v~~v~GNHD~~~---~~~~~~~~~~~------~~~~~~~~~~~~~-~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~ 169 (330)
T 3ib7_A 101 AE-LVWVMGNHDDRA---ELRKFLLDEAP------SMAPLDRVCMIDG-LRIIVLDTSVPGHHHGEIRASQLGWLAEELA 169 (330)
T ss_dssp CE-EEECCCTTSCHH---HHHHHHHCCCC------CCSCCCEEEEETT-EEEEECCCCCTTCCSBCCCHHHHHHHHHHTT
T ss_pred CC-EEEeCCCCCCHH---HHHHHhccccc------ccCCcceEEEeCC-EEEEEecCCCCCCCCCccCHHHHHHHHHHHH
Confidence 35 999999999853 34444432221 1334567888885 9999999976 45678899999999996
Q ss_pred hhcCCCCeEEEEecCCCccccccccC-CCccchHHHHHhhhCCceeEEEcCccCCCcceeecCCCCCcccceEEEecCCC
Q 007562 139 EQVGERDSVIIMTHEPNWLLDWYFNN-VSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGG 217 (598)
Q Consensus 139 ~~~~~~~~VIL~tHeP~w~~~~~~~~-~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R~~~~~~~g~~~~~~lIVsGGGG 217 (598)
+ .++++.|+++|||.+.......+ ....+.+.+.+.+.+.+++++++||+|..+..... + ..++++|+.+
T Consensus 170 ~--~~~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~~~---g----~~~~~~gs~~ 240 (330)
T 3ib7_A 170 T--PAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFV---G----IPVSVASATC 240 (330)
T ss_dssp S--CCTTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEEET---T----EEEEECCCSS
T ss_pred h--cccCCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccceEC---C----EEEEecCcce
Confidence 5 34455888999998865322221 11223344544444779999999999987754432 2 3567777666
Q ss_pred c
Q 007562 218 A 218 (598)
Q Consensus 218 A 218 (598)
.
T Consensus 241 ~ 241 (330)
T 3ib7_A 241 Y 241 (330)
T ss_dssp C
T ss_pred e
Confidence 4
No 8
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.47 E-value=5.7e-13 Score=140.59 Aligned_cols=132 Identities=16% Similarity=0.185 Sum_probs=83.8
Q ss_pred eEEecCCCCCCCCC-----------------hHHHHHhhcccCCCCccc-CCCCCceEEEECCCcEEEEEeecccC----
Q 007562 65 QCYIIPGNHDWFDG-----------------LNTFMRFICHKSWLGGWF-MPQKKSYFALQLPKGWWVFGLDLALH---- 122 (598)
Q Consensus 65 ~~~~~~gnhd~~~g-----------------L~aF~r~F~~~~~l~gw~-~~Q~~sYfAl~Lp~~wwLiGLDsql~---- 122 (598)
++++||||||.+.+ ...|...|.......... .+.+.+| .+....+++++|||+...
T Consensus 127 ~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-~~~~~~~~~~i~Lds~~~~~~~ 205 (443)
T 2xmo_A 127 QVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSY-LAAPSSKVWLLMLDTAIYKTNM 205 (443)
T ss_dssp EEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCE-EECSBSSEEEEECCCBCCTTHH
T ss_pred eEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceE-EEecCCCEEEEEeeCCCcCccc
Confidence 39999999998764 233433333211100000 2234455 555555799999999753
Q ss_pred --------CCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccC-CCccchHHHHHhhhCCceeEEEcCccCCC
Q 007562 123 --------CDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNN-VSGKNVKHLICDYLKGRCKLRIAGDMHHY 193 (598)
Q Consensus 123 --------g~id~~Q~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~-~~~~~v~~Li~~~l~~rV~L~LSGH~HhY 193 (598)
+.++..|.+|+++.+++....+.++|+++|+|.......+.+ ....+.+.+.+.+.+++|+++|+||+|..
T Consensus 206 ~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~ 285 (443)
T 2xmo_A 206 QQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQ 285 (443)
T ss_dssp HHTSCCCCBCCCHHHHHHHHHHHHHHHHTTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred ccCCCCcCCccCHHHHHHHHHHHHHHHHcCCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCCeEEEECCcccC
Confidence 567889999999998754445689999999999875432221 11223334434444568999999999976
Q ss_pred ccee
Q 007562 194 MRHS 197 (598)
Q Consensus 194 ~R~~ 197 (598)
....
T Consensus 286 ~~~~ 289 (443)
T 2xmo_A 286 NIRS 289 (443)
T ss_dssp EEEE
T ss_pred chhh
Confidence 5543
No 9
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=98.90 E-value=1.8e-08 Score=110.67 Aligned_cols=98 Identities=8% Similarity=-0.083 Sum_probs=69.0
Q ss_pred CCCceEEEECCCcEEEEEeecccCC----------------------CCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCc
Q 007562 99 QKKSYFALQLPKGWWVFGLDLALHC----------------------DIDVYQFKFFAELVKEQVGERDSVIIMTHEPNW 156 (598)
Q Consensus 99 Q~~sYfAl~Lp~~wwLiGLDsql~g----------------------~id~~Q~~wf~~~l~~~~~~~~~VIL~tHeP~w 156 (598)
..+-|+..+.+...-|+.||+...- .+..+|.+||++.|++ .+...+|++.|.|.+
T Consensus 258 ~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~--s~a~W~Iv~s~~p~~ 335 (527)
T 2yeq_A 258 DMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGS--STAHWNVLAQQIFFA 335 (527)
T ss_dssp BCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHH--CCSSEEEEECSSCCS
T ss_pred CceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhc--CCCCeEEEEeCCccc
Confidence 3467899999877899999986421 2457999999999975 556799999999988
Q ss_pred cccccccC---------CCccchH-HHHHhhhCCce--eEEEcCccCCCcceee
Q 007562 157 LLDWYFNN---------VSGKNVK-HLICDYLKGRC--KLRIAGDMHHYMRHSY 198 (598)
Q Consensus 157 ~~~~~~~~---------~~~~~v~-~Li~~~l~~rV--~L~LSGH~HhY~R~~~ 198 (598)
..+...+. .+....+ .|++.+...+| .++||||+|.|++...
T Consensus 336 ~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~ 389 (527)
T 2yeq_A 336 KWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNL 389 (527)
T ss_dssp CCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEE
T ss_pred ccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhc
Confidence 76432110 1111122 35454445666 4999999999988653
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=98.84 E-value=2.5e-09 Score=100.83 Aligned_cols=116 Identities=12% Similarity=-0.007 Sum_probs=59.9
Q ss_pred CCeEEecCCCCCCCCChHHHHHhhccc-CCCCcccCCCCCceEEEECCCcEEEEEeecccCC--CCCHH--------HHH
Q 007562 63 GPQCYIIPGNHDWFDGLNTFMRFICHK-SWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHC--DIDVY--------QFK 131 (598)
Q Consensus 63 ~p~~~~~~gnhd~~~gL~aF~r~F~~~-~~l~gw~~~Q~~sYfAl~Lp~~wwLiGLDsql~g--~id~~--------Q~~ 131 (598)
.| +++||||||.+.. +.+...+..+ .+.+.+. ..+. .+.++.+++++|++..... .+++. +.+
T Consensus 64 ~p-v~~v~GNHD~~~~-~~~~~~~~~~~~~~~~~~-l~~~---~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (228)
T 1uf3_A 64 LP-TAYVPGPQDAPIW-EYLREAANVELVHPEMRN-VHET---FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAE 137 (228)
T ss_dssp SC-EEEECCTTSCSHH-HHHHHHHHHHHHCTTEEE-CBTS---EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHH
T ss_pred Cc-EEEECCCCCchhH-HHHHhhhhhhccCcceEE-cccc---eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHH
Confidence 45 9999999998643 2221121000 0111111 1221 3455556999999853211 12222 233
Q ss_pred HHHHHHHhhcCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccC
Q 007562 132 FFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMH 191 (598)
Q Consensus 132 wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~H 191 (598)
|.++.+++ . ++++.|+++|+|.+..+... .+...+..+++ ..+++++++||+|
T Consensus 138 ~~~~~l~~-~-~~~~~il~~H~p~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~GH~H 190 (228)
T 1uf3_A 138 YRLKALWE-L-KDYPKIFLFHTMPYHKGLNE--QGSHEVAHLIK---THNPLLVLVAGKG 190 (228)
T ss_dssp HHHGGGGG-S-CSCCEEEEESSCBCBTTTBT--TSBHHHHHHHH---HHCCSEEEECCSS
T ss_pred HHHHHHHh-C-CCCCeEEEEccCcccCCccc--cCHHHHHHHHH---HhCCCEEEEcccc
Confidence 43444432 2 24689999999987541111 11112222322 3579999999999
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=98.56 E-value=8.8e-08 Score=92.83 Aligned_cols=117 Identities=15% Similarity=0.179 Sum_probs=59.0
Q ss_pred eEEecCCCCCCCCChHHHHHhhcccC-CCCcccCCCCCceEEEECCCcEEEEEeecccCC-CCCHHHHH----HHH----
Q 007562 65 QCYIIPGNHDWFDGLNTFMRFICHKS-WLGGWFMPQKKSYFALQLPKGWWVFGLDLALHC-DIDVYQFK----FFA---- 134 (598)
Q Consensus 65 ~~~~~~gnhd~~~gL~aF~r~F~~~~-~l~gw~~~Q~~sYfAl~Lp~~wwLiGLDsql~g-~id~~Q~~----wf~---- 134 (598)
++++||||||.+... +++.+..+. ....+....+ . .++++. +++++|++..... .+++.|.. |+.
T Consensus 91 pv~~v~GNHD~~~~~--~~~~~~~~~~~~~~~~~l~~-~-~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~l 165 (260)
T 2yvt_A 91 KTFVVPGKNDAPLKI--FLRAAYEAETAYPNIRVLHE-G-FAGWRG-EFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYIL 165 (260)
T ss_dssp EEEEECCTTSCCHHH--HHHHHHHTTTTCTTEEECSS-E-EEEETT-TEEEEEECSEEESSCCBSSSSCEEEHHHHHHHG
T ss_pred cEEEEcCCCCchhhh--hHHHHhhhccCCcceEEecC-c-ceEEEC-CEEEEecCCCcCCCCcCHHHHhhcchhhHHHHH
Confidence 499999999986432 111111111 0111122222 1 246776 5999999854211 22222222 332
Q ss_pred HHHHhhcCCCCeEEEEecCCCccc--ccc-cc--CCCccchHHHHHhhhCCceeEEEcCccC
Q 007562 135 ELVKEQVGERDSVIIMTHEPNWLL--DWY-FN--NVSGKNVKHLICDYLKGRCKLRIAGDMH 191 (598)
Q Consensus 135 ~~l~~~~~~~~~VIL~tHeP~w~~--~~~-~~--~~~~~~v~~Li~~~l~~rV~L~LSGH~H 191 (598)
+.+++ . ++.+.|+++|+|.+.. +.. .. ..+...+..+++ ..+++++++||+|
T Consensus 166 ~~l~~-~-~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~---~~~~~~vl~GH~H 222 (260)
T 2yvt_A 166 KFVNE-L-KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIK---SLNPEVAIVGHVG 222 (260)
T ss_dssp GGGGG-S-CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHH---HHCCSEEEECSSC
T ss_pred HHHHh-c-CCCCEEEEECCCccccccccCcccccccCcHHHHHHHH---HhCCCEEEECCcc
Confidence 22221 2 2467799999998742 211 00 111122333333 3579999999999
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=98.35 E-value=4.9e-07 Score=92.48 Aligned_cols=126 Identities=17% Similarity=0.203 Sum_probs=62.5
Q ss_pred CCeEEecCCCCCCCCChHHHHHhhcccC----CCCcccCCCCCceEEEEC-CCcEEEEEeecccCCCC-------CHHHH
Q 007562 63 GPQCYIIPGNHDWFDGLNTFMRFICHKS----WLGGWFMPQKKSYFALQL-PKGWWVFGLDLALHCDI-------DVYQF 130 (598)
Q Consensus 63 ~p~~~~~~gnhd~~~gL~aF~r~F~~~~----~l~gw~~~Q~~sYfAl~L-p~~wwLiGLDsql~g~i-------d~~Q~ 130 (598)
.| +++|+||||.+. +..+.+.+.... .++...... ...+ ..+..++|++......+ -..|.
T Consensus 97 ~p-v~~i~GNHD~~~-~~~~~~~l~~~g~nv~v~~~~~~~~-----~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~~~~ 169 (336)
T 2q8u_A 97 AP-VVVLPGNHDWKG-LKLFGNFVTSISSDITFVMSFEPVD-----VEAKRGQKVRILPFPYPDESEALRKNEGDFRFFL 169 (336)
T ss_dssp SC-EEECCC-------CHHHHHHHHHHCSSEEECCSSSCEE-----EECTTSCEEEEEEECCC-------CCSSHHHHHH
T ss_pred CC-EEEECCCCCccc-cccHHHHHHhcCCEEEEEecccccC-----ceEEeCCCEEEEECCCCCHHHHHHHhhHHHHHHH
Confidence 35 999999999877 665555432111 121111000 1122 23488999975432221 13567
Q ss_pred HHHHHHHHhhc-CCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCcce
Q 007562 131 KFFAELVKEQV-GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 196 (598)
Q Consensus 131 ~wf~~~l~~~~-~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R~ 196 (598)
+|+.+.++++. +++.+.|+++|.|........+..... ...+-..+.+.+++++++||+|..+..
T Consensus 170 ~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~~-~~~v~~~l~~~~~d~v~~GH~H~~~~~ 235 (336)
T 2q8u_A 170 ESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQGR-EIIINRALIPSVVDYAALGHIHSFREI 235 (336)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEEESEETTCC--------C-CCEECGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHhccCCCCCEEEEECccccCCCCCCCccchh-hcccCHHHccccCCEEEEccccCceEe
Confidence 78777665444 677899999999976432110000000 000101233568999999999987655
No 13
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=97.98 E-value=2e-05 Score=81.22 Aligned_cols=126 Identities=14% Similarity=0.167 Sum_probs=64.3
Q ss_pred CCCeEEecCCCCCCCCChHHHHHhhcccC-------------CCCccc-------CCCCCceEEEECCCcEEEEEeeccc
Q 007562 62 DGPQCYIIPGNHDWFDGLNTFMRFICHKS-------------WLGGWF-------MPQKKSYFALQLPKGWWVFGLDLAL 121 (598)
Q Consensus 62 ~~p~~~~~~gnhd~~~gL~aF~r~F~~~~-------------~l~gw~-------~~Q~~sYfAl~Lp~~wwLiGLDsql 121 (598)
+.+++++|+||||++-+.+.+... ..+. ....|+ -.+.+++ .+. |+.++|..-.-
T Consensus 109 ~~~~v~~V~GNHD~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~---~i~-Gl~i~Gsp~tP 183 (296)
T 3rl5_A 109 PYEYKIVIAGNHELTFDKEFMADL-VKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEV---TVK-GFRIYGAPWTP 183 (296)
T ss_dssp CCSEEEECCCTTCGGGCHHHHHHH-TTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEE---EET-TEEEEEECCBC
T ss_pred CCCeEEEEcCCcccccchhhhhhh-hcccccccccccccccchhhhHhhhcCCeEEecCCcE---EEC-CEEEEEecCCC
Confidence 345699999999987664433221 1100 011222 2344433 333 69999954321
Q ss_pred C---CCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccc-cCCCccchHHHHHhhh-CCceeEEEcCccCCCc
Q 007562 122 H---CDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYF-NNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYM 194 (598)
Q Consensus 122 ~---g~id~~Q~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~-~~~~~~~v~~Li~~~l-~~rV~L~LSGH~HhY~ 194 (598)
. .....++.+.+.+... ++ +++.-||+||.|.+...... .+......+.|.+.+. +.++++++.||+|...
T Consensus 184 ~~~~~~f~~~~~~~~~~~~~-~i-p~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~ 259 (296)
T 3rl5_A 184 WFNGWGFNLPRGQSLLDKWN-LI-PEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGY 259 (296)
T ss_dssp C--CCTTBCCTTHHHHHHHT-TS-CTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGC
T ss_pred CCCCcCCCcchHHHHHHHHh-hC-CCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCC
Confidence 1 1111112223323222 24 45677999999998762211 0000011234445453 6789999999999643
No 14
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=97.95 E-value=4.5e-05 Score=80.00 Aligned_cols=127 Identities=17% Similarity=0.249 Sum_probs=66.7
Q ss_pred CCeEEecCCCCCCCCChHHHHHhhcccCCCCcccCC-CCCceEEEECCCc--EEEEEeecccCCC----CCHHHHHHHHH
Q 007562 63 GPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMP-QKKSYFALQLPKG--WWVFGLDLALHCD----IDVYQFKFFAE 135 (598)
Q Consensus 63 ~p~~~~~~gnhd~~~gL~aF~r~F~~~~~l~gw~~~-Q~~sYfAl~Lp~~--wwLiGLDsql~g~----id~~Q~~wf~~ 135 (598)
.| +++|+||||+ .++..+..... ......... ...+ ..+.-.+| .++.|+.-..... ....+.+|+.+
T Consensus 79 ~~-v~~i~GNHD~-~~~~~~~~~~~--~~~~~~~~~~~~~~-v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~~l~~ 153 (379)
T 3tho_B 79 AP-VVVLPGNQDW-KGLKLFGNFVT--SISSDITFVMSFEP-VDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLES 153 (379)
T ss_dssp SC-EEECCCTTSC-TTHHHHHHHHH--TTCSSEEECCSSCC-EEEECTTCCEEEEEEECCCCCC----CHHHHHHHHHHH
T ss_pred CC-EEEEcCCCcc-ccCcccccccc--ccCCcceeecccce-EEEEcCCCCEEEEEECCCCCHHHHhhhhccchHHHHHH
Confidence 35 9999999996 45443322211 011111000 1111 24443333 7788886432222 22456788887
Q ss_pred HHH----hhcCCCCeEEEEecCCCccccccccCCCccchH-HHHHhhhCCceeEEEcCccCCCcce
Q 007562 136 LVK----EQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVK-HLICDYLKGRCKLRIAGDMHHYMRH 196 (598)
Q Consensus 136 ~l~----~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~-~Li~~~l~~rV~L~LSGH~HhY~R~ 196 (598)
.++ ++..++.+.|+++|-|.--.....++ ...+. .+-..+++.+++.++.||+|..+..
T Consensus 154 ~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~s--e~~~~~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 154 RLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGI--EQGREIIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEeccccCCccCCCC--ccccccccCHHHcCcCCCEEEcccccCCeEe
Confidence 765 44567899999999886432110000 00000 0112333578999999999977544
No 15
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=97.87 E-value=3.1e-05 Score=81.12 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=58.3
Q ss_pred eEEecCCCCCCCCChHH--HHHhhcccCCCCcccCCCCCceEEEECCCcEEEEEeecccCCCCCHHHHHHHHHHHHhhcC
Q 007562 65 QCYIIPGNHDWFDGLNT--FMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVG 142 (598)
Q Consensus 65 ~~~~~~gnhd~~~gL~a--F~r~F~~~~~l~gw~~~Q~~sYfAl~Lp~~wwLiGLDsql~g~id~~Q~~wf~~~l~~~~~ 142 (598)
++++|+||||....... ..+.+. .. +....+..+. +.=..+..++|++...... .....++++.+.. +..
T Consensus 97 pv~~v~GNHD~~~~~~~~~~~~~l~--~~---v~~l~~~~v~-~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~~-~~~ 168 (386)
T 3av0_A 97 KVYIVAGNHEMPRRLGEESPLALLK--DY---VKILDGKDVI-NVNGEEIFICGTYYHKKSK-REEMLDKLKNFES-EAK 168 (386)
T ss_dssp EEEECCCGGGSCSSTTSCCGGGGGT--TT---CEECSEEEEE-EETTEEEEEEEECCCCSTT-HHHHHHHHHHHHH-HHH
T ss_pred cEEEEcCCCCCCccccccCHHHHHH--HH---eEEcCCCcEE-EeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhhh-hcc
Confidence 49999999998765432 111111 01 1111112232 2212358899998643322 2233444444322 123
Q ss_pred CCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCc
Q 007562 143 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 194 (598)
Q Consensus 143 ~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~ 194 (598)
++.+.|+++|.|...... +... -.+ .. +.. ++++++||+|..+
T Consensus 169 ~~~~~Ill~H~~~~~~~~--~~~~-~~~----~~-l~~-~d~v~~GH~H~~~ 211 (386)
T 3av0_A 169 NYKKKILMLHQGINPYIP--LDYE-LEH----FD-LPK-FSYYALGHIHKRI 211 (386)
T ss_dssp TCSSEEEEECCCCTTTSS--SSCS-SCG----GG-SCC-CSEEEECSCCSCE
T ss_pred cCCCEEEEECcCccccCC--CCcc-cCH----HH-hhh-CCeEEccCCCCCc
Confidence 567899999999753211 1110 011 11 133 9999999999764
No 16
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=97.72 E-value=0.00016 Score=73.94 Aligned_cols=120 Identities=17% Similarity=0.201 Sum_probs=58.4
Q ss_pred CCeEEecCCCCCCCCChHHHHHhhcccCC---CCcccCCCCCceEEE-ECC----------CcEEEEEeecccCCCCCHH
Q 007562 63 GPQCYIIPGNHDWFDGLNTFMRFICHKSW---LGGWFMPQKKSYFAL-QLP----------KGWWVFGLDLALHCDIDVY 128 (598)
Q Consensus 63 ~p~~~~~~gnhd~~~gL~aF~r~F~~~~~---l~gw~~~Q~~sYfAl-~Lp----------~~wwLiGLDsql~g~id~~ 128 (598)
.| +++|+||||.+..+....+.+..... ++.-.......+... +.. .+..+.|++ +.+
T Consensus 76 ~~-v~~v~GNHD~~~~~~~~~~~l~~~g~v~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~-----~~~-- 147 (333)
T 1ii7_A 76 IP-VFAIEGNHDRTQRGPSVLNLLEDFGLVYVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMK-----YMS-- 147 (333)
T ss_dssp CC-EEEECCTTTCCSSSCCHHHHHHHTTSCEECEEESSCCCSSSEEEEECTTSCEEEEEEETTEEEEEEC-----CCC--
T ss_pred Cc-EEEeCCcCCCccCCcCHHHHHHHcCCcEEecccccccccceeeecccCCCceeeccCcCCEEEEecC-----CcC--
Confidence 45 99999999997654444333321111 110001111122222 222 235566663 222
Q ss_pred HHHHHHH---HHHhhcCCCCeEEEEecCCCccccccccCCCcc-chHHHHHhhhCCceeEEEcCccCCCcce
Q 007562 129 QFKFFAE---LVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGK-NVKHLICDYLKGRCKLRIAGDMHHYMRH 196 (598)
Q Consensus 129 Q~~wf~~---~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~-~v~~Li~~~l~~rV~L~LSGH~HhY~R~ 196 (598)
..|+++ .+++...++.+.|+++|.|.............+ .. ..+ ...++++++||+|..+..
T Consensus 148 -~~~~~~~~~~l~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~~~~~----~~l-~~~~dyvalGH~H~~q~~ 213 (333)
T 1ii7_A 148 -SAWFEANKEILKRLFRPTDNAILMLHQGVREVSEARGEDYFEIGL----GDL-PEGYLYYALGHIHKRYET 213 (333)
T ss_dssp -HHHHHSSTTHHHHHCCCCSSEEEEEECCBHHHHHTTTCCCCSBCG----GGS-CTTCSEEEEESCSSCEEE
T ss_pred -HHHHHHHHHHHHHhhCCCCCeEEEEcCChhhcccccccccceecH----HHC-CccCCEEEccccccceec
Confidence 234433 233335566779999999964221100000011 11 111 346899999999987754
No 17
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=97.53 E-value=3.6e-05 Score=74.66 Aligned_cols=70 Identities=4% Similarity=-0.184 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHHHHHhh-cCCCCeEEEEecCCCccc-cccccCCCccchHHHHHhhhCC-ceeEEEcCccCCCcc
Q 007562 124 DIDVYQFKFFAELVKEQ-VGERDSVIIMTHEPNWLL-DWYFNNVSGKNVKHLICDYLKG-RCKLRIAGDMHHYMR 195 (598)
Q Consensus 124 ~id~~Q~~wf~~~l~~~-~~~~~~VIL~tHeP~w~~-~~~~~~~~~~~v~~Li~~~l~~-rV~L~LSGH~HhY~R 195 (598)
.+++.|++||+++.... .+-++..|+++|+|.... +.+... ..+.+.+.+.+... +++++++||+|....
T Consensus 109 ~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~ 181 (252)
T 1nnw_A 109 KLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLA--EQPTSYYEAIMRPVKDYEMLIVASPMYPVD 181 (252)
T ss_dssp HHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCS--SCCHHHHHHHHGGGTTSSEEEESTTCSEEE
T ss_pred HCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCcccccCC--CCCHHHHHHHHhcCCCCCEEEECCccccce
Confidence 34567888988754321 122456788899887432 111100 11112332222244 799999999997443
No 18
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=97.15 E-value=0.00054 Score=64.51 Aligned_cols=50 Identities=20% Similarity=0.186 Sum_probs=30.6
Q ss_pred CCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCcce
Q 007562 144 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 196 (598)
Q Consensus 144 ~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R~ 196 (598)
++..|+++|+|......... ..+.+.+.+.+...+++++++||+|.....
T Consensus 105 ~~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~ 154 (195)
T 1xm7_A 105 KGKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNREG 154 (195)
T ss_dssp TTEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSCC
T ss_pred CCcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCcc
Confidence 35689999999865432110 012233433333567999999999975443
No 19
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=96.76 E-value=0.0067 Score=65.80 Aligned_cols=126 Identities=14% Similarity=0.085 Sum_probs=67.8
Q ss_pred EEecCCCCCCCCChHHHHHhhcccC--CC-Cccc-----CCCCCceEEEECCC-cEEEEEeecccCCCC-----------
Q 007562 66 CYIIPGNHDWFDGLNTFMRFICHKS--WL-GGWF-----MPQKKSYFALQLPK-GWWVFGLDLALHCDI----------- 125 (598)
Q Consensus 66 ~~~~~gnhd~~~gL~aF~r~F~~~~--~l-~gw~-----~~Q~~sYfAl~Lp~-~wwLiGLDsql~g~i----------- 125 (598)
-++++||||+..|.+.+.+..-... ++ +... .+.-.+|-.++... ..-++|+.+.....+
T Consensus 85 d~~~~GNHEfd~g~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~~~~~~ 164 (516)
T 1hp1_A 85 DAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEF 164 (516)
T ss_dssp CEEECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSCTTEEE
T ss_pred CEEeeccccccCCHHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCccCCcEE
Confidence 4788999999888776655432211 11 1211 11124565555532 267889876432111
Q ss_pred -CH--HHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCcc
Q 007562 126 -DV--YQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 195 (598)
Q Consensus 126 -d~--~Q~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R 195 (598)
|. .-.++++++ ++ ....+.||+++|.|......... .......+.+.+-+.+++++|+||+|....
T Consensus 165 ~d~~~~~~~~v~~l-~~-~~~~d~iI~l~H~g~~~~~~~~~--~~~~~~~la~~~~~~~iDlilgGHtH~~~~ 233 (516)
T 1hp1_A 165 RKPADEAKLVIQEL-QQ-TEKPDIIIAATHMGHYDNGEHGS--NAPGDVEMARALPAGSLAMIVGGHSQDPVC 233 (516)
T ss_dssp CCHHHHHHHHHHHH-HH-HTCCSEEEEEEESCCCGGGCCTT--SCCCHHHHHHHSCTTSSSEEECCSSCCBCC
T ss_pred eCHHHHHHHHHHHH-Hh-cCCCCEEEEEecCCccCCCcccc--cCchHHHHHHhCCCCceeEEECCCCCcccc
Confidence 21 123444443 22 13458999999999754322110 001122344444456799999999997654
No 20
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=96.70 E-value=0.0013 Score=62.65 Aligned_cols=38 Identities=24% Similarity=0.246 Sum_probs=25.4
Q ss_pred CCeEEEEecCCCccccccccCCCccchHHHHHhhhC-CceeEEEcCccCCCcce
Q 007562 144 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLK-GRCKLRIAGDMHHYMRH 196 (598)
Q Consensus 144 ~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~-~rV~L~LSGH~HhY~R~ 196 (598)
++..|+++|.|... + .+.+.. .+++++++||+|..+-.
T Consensus 114 ~~~~ill~Hg~~~~------------l---~~~~~~~~~~d~vl~GHtH~~~~~ 152 (190)
T 1s3l_A 114 DDLKFFITHGHHQS------------V---LEMAIKSGLYDVVIYGHTHERVFE 152 (190)
T ss_dssp TTEEEEEEESCCHH------------H---HHHHHHHSCCSEEEEECSSCCEEE
T ss_pred CCcEEEEECCChHH------------H---HHHHHhcCCCCEEEECCCCCcceE
Confidence 46789999998642 1 122222 37899999999975443
No 21
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=96.66 E-value=0.0004 Score=67.91 Aligned_cols=64 Identities=11% Similarity=0.127 Sum_probs=38.8
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCC
Q 007562 123 CDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 193 (598)
Q Consensus 123 g~id~~Q~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY 193 (598)
..++..|.+||+++... ...+ -++++|.+.....+ .... +...+.+.+.+.+++++++||+|.-
T Consensus 91 ~~l~~~~~~~L~~lp~~-~~~~--~i~~~Hg~p~~~~~---~~~~-~~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 91 MQLQAEHLQYLESLPNR-MIDG--DWTVVHGSPRHPIW---EYIY-NARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp HHCCHHHHHHHHHCCSE-EEET--TEEEESSCSSSTTT---CCCC-SHHHHHHHGGGCCSSEEECCSSSSE
T ss_pred HHcCHHHHHHHHhCCcE-EEEC--CEEEEECCcCCccc---cccC-ChHHHHHHHhccCCCEEEECCcCcc
Confidence 34567899999986532 2222 47778877654321 1111 2233444444678999999999963
No 22
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=96.60 E-value=0.0053 Score=57.76 Aligned_cols=15 Identities=20% Similarity=0.375 Sum_probs=12.4
Q ss_pred CceeEEEcCccCCCc
Q 007562 180 GRCKLRIAGDMHHYM 194 (598)
Q Consensus 180 ~rV~L~LSGH~HhY~ 194 (598)
.+++++++||+|...
T Consensus 116 ~~~d~vi~GHtH~~~ 130 (192)
T 1z2w_A 116 FDVDILISGHTHKFE 130 (192)
T ss_dssp HSSSEEECCSSCCCE
T ss_pred cCCCEEEECCcCcCc
Confidence 468899999999754
No 23
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=96.36 E-value=0.0037 Score=57.92 Aligned_cols=43 Identities=19% Similarity=0.208 Sum_probs=26.6
Q ss_pred CeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCcc
Q 007562 145 DSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 195 (598)
Q Consensus 145 ~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R 195 (598)
+..|+++|.|.+.... +.+.+.+.+...+++++++||+|...-
T Consensus 77 ~~~i~~~Hg~~~~~~~--------~~~~l~~~~~~~~~d~vi~GHtH~~~~ 119 (176)
T 3ck2_A 77 STKIIQTHGHLFDINF--------NFQKLDYWAQEEEAAICLYGHLHVPSA 119 (176)
T ss_dssp TEEEEEECSGGGTTTT--------CSHHHHHHHHHTTCSEEECCSSCCEEE
T ss_pred CeEEEEECCCccCCCC--------CHHHHHHHHHhcCCCEEEECCcCCCCc
Confidence 4678899988764311 122222222246799999999997543
No 24
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=96.16 E-value=0.0016 Score=62.81 Aligned_cols=43 Identities=14% Similarity=0.146 Sum_probs=24.3
Q ss_pred CCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCc
Q 007562 144 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 194 (598)
Q Consensus 144 ~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~ 194 (598)
++..|+++|.+.+... .....+..+++ ..+++++++||+|...
T Consensus 112 ~~~~i~l~Hg~~~~~~-----~~~~~l~~~~~---~~~~d~vl~GHtH~~~ 154 (215)
T 2a22_A 112 GEFKIGLMHGNQVLPW-----DDPGSLEQWQR---RLDCDILVTGHTHKLR 154 (215)
T ss_dssp TTEEEEEECSTTSSST-----TCHHHHHHHHH---HHTCSEEEECSSCCCE
T ss_pred CCeEEEEEcCCccCCC-----CCHHHHHHHHh---hcCCCEEEECCcCCCc
Confidence 4567888895543221 01112222222 3468999999999753
No 25
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=95.95 E-value=0.03 Score=61.53 Aligned_cols=113 Identities=13% Similarity=0.090 Sum_probs=63.1
Q ss_pred EEecCCCCCCCCChHHHHHhhcccC--CCC-cccCC-------CCCceEEEECCC-cEEEEEeecccC------C-CC--
Q 007562 66 CYIIPGNHDWFDGLNTFMRFICHKS--WLG-GWFMP-------QKKSYFALQLPK-GWWVFGLDLALH------C-DI-- 125 (598)
Q Consensus 66 ~~~~~gnhd~~~gL~aF~r~F~~~~--~l~-gw~~~-------Q~~sYfAl~Lp~-~wwLiGLDsql~------g-~i-- 125 (598)
-++++||||+..|.+.+.+.+-+.. .++ ..... .-.+|..++... ..-++|+.+... + .+
T Consensus 109 d~~~lGNHEfd~g~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~ 188 (552)
T 2z1a_A 109 RAMALGNHEFDLGPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPGPTVAF 188 (552)
T ss_dssp CEEECCGGGGTTCHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSCCCTTCEE
T ss_pred CccccccccccCCHHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhccCCCCCcEE
Confidence 4778999999889877766543322 111 22111 123565566532 267889876421 1 11
Q ss_pred -CH-HHH-HHHHHHHHhhcCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCcc
Q 007562 126 -DV-YQF-KFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 195 (598)
Q Consensus 126 -d~-~Q~-~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R 195 (598)
|. ++. +++++ +++ ...+.||+++|.|.-.. ..+.+++ ..++|+|+||+|....
T Consensus 189 ~d~~~~~~~~v~~-l~~--~~~d~iIvL~H~g~~~d------------~~la~~~--~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 189 LDPYESAQKAVYE-LLA--KGVNKIVVLSHLGYGED------------LKLARRL--VGVQVIVGGHSHTLLG 244 (552)
T ss_dssp CCHHHHHHHHHHH-HHH--TTCCCEEEEEESCHHHH------------HHHHTTC--SSCCEEEECSSCCCBS
T ss_pred CCHHHHHHHHHHH-HHh--cCCCEEEEEeCCCcchH------------HHHHHhC--CCccEEEeCCcCcccc
Confidence 22 222 23332 332 34689999999994211 1122222 4599999999997654
No 26
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=94.64 E-value=0.018 Score=62.89 Aligned_cols=119 Identities=13% Similarity=0.148 Sum_probs=59.9
Q ss_pred CeEEecCCCCCCCCChHH--HHHhhcccC---CCCcccCCCCCceEEEECCC---cEEEEEeecccCCCCCHHH-HHHHH
Q 007562 64 PQCYIIPGNHDWFDGLNT--FMRFICHKS---WLGGWFMPQKKSYFALQLPK---GWWVFGLDLALHCDIDVYQ-FKFFA 134 (598)
Q Consensus 64 p~~~~~~gnhd~~~gL~a--F~r~F~~~~---~l~gw~~~Q~~sYfAl~Lp~---~wwLiGLDsql~g~id~~Q-~~wf~ 134 (598)
.+||+|+||||...+.+. .++.+.... .++.+....+-....+.+.+ .-.|.|+ +.+.+.. .+.+.
T Consensus 184 IpVf~I~GNHD~~~~~~~~s~~~LL~~~g~v~l~g~~~~~d~i~~~pv~l~kg~~~valyGl-----~y~~d~rl~r~~~ 258 (472)
T 4fbk_A 184 IPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGI-----SNVRDERLYHSFR 258 (472)
T ss_dssp SCEEECCCCCCSCCC--CCCHHHHHHHTTSCEECCCCSCSSSEEECCEEEEETTEEEEEEEC-----CCCCHHHHHHHHH
T ss_pred CcEEEEecCCCCccccccccHHHHhccCCcEEEeCCcccCCceeEEEEEEEeCCceEEEEec-----CCCchhhhhhhhh
Confidence 449999999999877542 444432222 23333322221111122221 2456666 4444322 13333
Q ss_pred HHHHhhc-----CCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCcce
Q 007562 135 ELVKEQV-----GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 196 (598)
Q Consensus 135 ~~l~~~~-----~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R~ 196 (598)
+-..+.. .++..-|+++|.+..-.+. .+ .+-+.++...+++++.||+|..+..
T Consensus 259 e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~--~~-------yipe~ll~~g~DyValGH~H~~~~~ 316 (472)
T 4fbk_A 259 ENKVKFLRPDLYRDEWFNLLTVHQNHSAHTP--TS-------YLPESFIQDFYDFVLWGHEHECLID 316 (472)
T ss_dssp TTCEEEEEESTTGGGEEEEEEEESCSCCSST--TS-------SCCGGGSCTTCSEEEEESCCSCEEE
T ss_pred hhhhhhhCcccccCCceEEEEecCCccCCCc--cc-------cCChhhhhcCCCEEEecCcccceee
Confidence 2111111 1345679999998654321 00 1113455678999999999986554
No 27
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=94.61 E-value=0.0087 Score=56.31 Aligned_cols=16 Identities=13% Similarity=0.183 Sum_probs=13.1
Q ss_pred CCceeEEEcCccCCCc
Q 007562 179 KGRCKLRIAGDMHHYM 194 (598)
Q Consensus 179 ~~rV~L~LSGH~HhY~ 194 (598)
..++++++.||+|...
T Consensus 126 ~~~~d~vi~GHtH~~~ 141 (178)
T 2kkn_A 126 NEKPQVILFGHTHEPE 141 (178)
T ss_dssp SSCCSEEECCSCSSCC
T ss_pred ccCCCEEEECccCCCC
Confidence 4678999999999653
No 28
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=94.58 E-value=0.14 Score=55.21 Aligned_cols=45 Identities=16% Similarity=0.067 Sum_probs=28.9
Q ss_pred CCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCcce
Q 007562 143 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 196 (598)
Q Consensus 143 ~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R~ 196 (598)
++...|+++|.+....+. .+ .+-+.++...+++++.||+|..+..
T Consensus 228 ~~~~~Ilv~H~~~~~~g~--~~-------~ip~~l~~~~~Dyv~lGH~H~~~~~ 272 (431)
T 3t1i_A 228 NSWFNLFVIHQNRSKHGS--TN-------FIPEQFLDDFIDLVIWGHEHECKIA 272 (431)
T ss_dssp GGEEEEEEECSCCSCSSS--SS-------SCCGGGSCTTCCEEEECSCCSCEEE
T ss_pred CCceEEEEECCCccCCCc--cc-------cCCHhHhhCCCCEEEeccccccccc
Confidence 346899999997632110 00 1113455667999999999987654
No 29
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=94.43 E-value=0.22 Score=54.23 Aligned_cols=127 Identities=15% Similarity=0.162 Sum_probs=63.7
Q ss_pred EecCCCCCCCCChHHHHHhhcccC--CC-Cccc---CC-CCCceEEEECCC-cEEEEEeecccCCCCCH----------H
Q 007562 67 YIIPGNHDWFDGLNTFMRFICHKS--WL-GGWF---MP-QKKSYFALQLPK-GWWVFGLDLALHCDIDV----------Y 128 (598)
Q Consensus 67 ~~~~gnhd~~~gL~aF~r~F~~~~--~l-~gw~---~~-Q~~sYfAl~Lp~-~wwLiGLDsql~g~id~----------~ 128 (598)
++++||||+-.|.+.+.+.+-... ++ +... .+ ...+|-.++... .-=++|+.+........ .
T Consensus 104 ~~t~GNHefd~G~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~~~~~~g~~~~d 183 (527)
T 3qfk_A 104 FGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHS 183 (527)
T ss_dssp EECCCGGGGTTCHHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGTSCHHHHTTEEECC
T ss_pred EEeccccccccCHHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccccCccccCCcEEcC
Confidence 567999999888887777554322 12 1111 01 124565555432 15567886542111110 1
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCC----Cccc-hHHHHHhhhCCceeEEEcCccCCCcc
Q 007562 129 QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNV----SGKN-VKHLICDYLKGRCKLRIAGDMHHYMR 195 (598)
Q Consensus 129 Q~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~----~~~~-v~~Li~~~l~~rV~L~LSGH~HhY~R 195 (598)
..+-+++.+++....-+.||+++|.+.-.. ...+.. ++.+ ..++.+++ ...++++|+||+|....
T Consensus 184 ~~~~~~~~v~~l~~~~D~iIvl~H~G~~~d-~~~~~~~~~~~~e~~~~~la~~~-~~giDlIlgGHtH~~~~ 253 (527)
T 3qfk_A 184 AFEILQQYLPEMKRHADIIVVCYHGGFEKD-LESGTPTEVLTGENEGYAMLEAF-SKDIDIFITGHQHRQIA 253 (527)
T ss_dssp HHHHHHHHHHHHHHHCSEEEEEEECCCSBC-TTTCCBSSCCSSSCCHHHHHHHH-GGGCSEEECCSSCCEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCcCcccc-cccCccccccccchHHHHHHHhc-CCCCcEEEECCCCcccc
Confidence 123333333221123478999999764322 110100 1112 33454443 25799999999997553
No 30
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=94.43 E-value=0.23 Score=54.98 Aligned_cols=111 Identities=13% Similarity=0.138 Sum_probs=60.2
Q ss_pred ecCCCCCCCCChHHHHHhhcccC--CCC-ccc-----CCCCCceEEEECCC-cEEEEEeecccC----------C--CCC
Q 007562 68 IIPGNHDWFDGLNTFMRFICHKS--WLG-GWF-----MPQKKSYFALQLPK-GWWVFGLDLALH----------C--DID 126 (598)
Q Consensus 68 ~~~gnhd~~~gL~aF~r~F~~~~--~l~-gw~-----~~Q~~sYfAl~Lp~-~wwLiGLDsql~----------g--~id 126 (598)
++ ||||+..|.+.+.+..-.-. +++ ... .+.-.+|-.++... .--++|+.+... + ..|
T Consensus 160 ~~-GNHEfd~G~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~ 238 (562)
T 2wdc_A 160 MV-SHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFAL 238 (562)
T ss_dssp EC-CSGGGGGCHHHHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCC
T ss_pred Ee-cchhcccCHHHHHHHHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeC
Confidence 36 99998878777666443221 121 221 12233565555432 267888865311 0 112
Q ss_pred H-HH-HHHHHHHHHhhcCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCcce
Q 007562 127 V-YQ-FKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 196 (598)
Q Consensus 127 ~-~Q-~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R~ 196 (598)
. ++ .++++++ ++ ...+.||+++|.|.-. -.++.+++ ..++|+|+||+|....+
T Consensus 239 ~~~~~~~~v~~l-~~--~~~d~iIvLsH~g~~~------------d~~la~~~--~giDlIlgGHtH~~~~~ 293 (562)
T 2wdc_A 239 DERRLQEAVDKA-RA--EGANAVVLLSHNGMQL------------DAALAERI--RGIDLILSGHTHDLTPR 293 (562)
T ss_dssp CHHHHHHHHHHH-HH--TTCSEEEEEECSCHHH------------HHHHHTTS--SSCCEEEECSSCCCCSS
T ss_pred HHHHHHHHHHHH-HH--CCCCEEEEEeCCCCcc------------hHHHHhcC--CCCcEEEeCCCCCCCcc
Confidence 1 22 3344433 22 3467999999998421 11222222 46999999999986654
No 31
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=94.26 E-value=0.018 Score=61.83 Aligned_cols=120 Identities=15% Similarity=0.136 Sum_probs=57.6
Q ss_pred CCeEEecCCCCCCCCChH--HHHHhhcccC---CCCcccCCCCCceE--EEECCC-cEEEEEeecccCCCCCHHHH-HHH
Q 007562 63 GPQCYIIPGNHDWFDGLN--TFMRFICHKS---WLGGWFMPQKKSYF--ALQLPK-GWWVFGLDLALHCDIDVYQF-KFF 133 (598)
Q Consensus 63 ~p~~~~~~gnhd~~~gL~--aF~r~F~~~~---~l~gw~~~Q~~sYf--Al~Lp~-~wwLiGLDsql~g~id~~Q~-~wf 133 (598)
+.+||+|+||||...+.+ +.++.+.... .++.+....+-... .++-+. .-.|.|+ +.+.+... +.+
T Consensus 120 gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~~~~~~i~~~pv~l~~g~~~valyG~-----~~~~d~rl~r~~ 194 (417)
T 4fbw_A 120 AIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGI-----SNVRDERLYHSF 194 (417)
T ss_dssp SSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCCC---CEEECCEEEEETTEEEEEEEE-----CCCCHHHHHHHH
T ss_pred CCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCcccCCceeEEeEEEEecCceEEEEec-----cCCchhhhhhhh
Confidence 344999999999877653 2344332222 23333322221111 222221 2556666 44443221 233
Q ss_pred HH-HHH---hh-cCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCcce
Q 007562 134 AE-LVK---EQ-VGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 196 (598)
Q Consensus 134 ~~-~l~---~~-~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~R~ 196 (598)
.+ .++ .. ..++..-|++.|.+....+. . .+ + -+.+++..+++++.||+|..+..
T Consensus 195 ~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~--~--~y--i---p~~l~~~~~DyvalGH~H~~~~~ 253 (417)
T 4fbw_A 195 RENKVKFLRPDLYRDEWFNLLTVHQNHSAHTP--T--SY--L---PESFIQDFYDFVLWGHEHECLID 253 (417)
T ss_dssp HTTCEEEEEESTTTTTSEEEEEEESCSSCSSS--S--SS--C---CGGGSCTTCSEEEEESCCSCEEE
T ss_pred hhhhhhhcCcccccCCceEEEEecCCccCCCC--c--cc--C---chhHhhcCCCEEEecCcccccee
Confidence 32 111 10 13456789999998754321 1 11 1 13455678999999999986554
No 32
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=93.97 E-value=0.34 Score=52.64 Aligned_cols=126 Identities=17% Similarity=0.169 Sum_probs=61.4
Q ss_pred EEecCCCCCCCCChHHHHHhhcccC--CC-Cccc-----CCC-CCceEEEECCC-cEEEEEeecc-------c----CC-
Q 007562 66 CYIIPGNHDWFDGLNTFMRFICHKS--WL-GGWF-----MPQ-KKSYFALQLPK-GWWVFGLDLA-------L----HC- 123 (598)
Q Consensus 66 ~~~~~gnhd~~~gL~aF~r~F~~~~--~l-~gw~-----~~Q-~~sYfAl~Lp~-~wwLiGLDsq-------l----~g- 123 (598)
-++++||||+..|.+.+.+.+-+.. ++ +... .+. ..+|-.++... ..-++|+-+. . .+
T Consensus 87 D~~tlGNHEfd~G~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~~~~~~~g~ 166 (509)
T 3ive_A 87 DAVTIGNHEFDHGWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATRVGI 166 (509)
T ss_dssp SEECCCGGGGTTCHHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHHHSCGGGCTTE
T ss_pred cEEeecccccccCHHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcccccccccccCCCC
Confidence 3567899999889888777554322 11 1221 122 34565555432 1557788321 1 11
Q ss_pred -CCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccC---CCccchH-HHHHhhhCCceeEEEcCccCCCcc
Q 007562 124 -DIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNN---VSGKNVK-HLICDYLKGRCKLRIAGDMHHYMR 195 (598)
Q Consensus 124 -~id~~Q~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~---~~~~~v~-~Li~~~l~~rV~L~LSGH~HhY~R 195 (598)
..|. .+-.++.+++...+-+.||+++|.+.=........ ..+.+.+ ++.+.+ ..++++|+||+|....
T Consensus 167 ~~~d~--~~~~~~~v~~Lk~~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~la~~~--~giDlIlgGHtH~~~~ 239 (509)
T 3ive_A 167 EARDE--IKWLQRYIDELKGKVDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQV--KGLDILITGHAHVGTP 239 (509)
T ss_dssp EECCH--HHHHHHHHHHHTTTCSEEEEEEECSSCCCCCCC---CCCCCCHHHHHHHHHC--SSCCEEEEESSCCCCS
T ss_pred EEcCH--HHHHHHHHHHHHhcCCEEEEEeccCcCCccccccccccccccchHHHHHhcC--CCCcEEEeCCcCccCC
Confidence 1122 23333333221123678999999873111000000 0011122 232332 2499999999997544
No 33
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=92.97 E-value=0.085 Score=57.91 Aligned_cols=114 Identities=11% Similarity=0.125 Sum_probs=58.4
Q ss_pred EecCCCCCCCCChHHHH-HhhcccC--CC-CcccC-----C----CCCceEEEECCC-cEEEEEeecccC------C-CC
Q 007562 67 YIIPGNHDWFDGLNTFM-RFICHKS--WL-GGWFM-----P----QKKSYFALQLPK-GWWVFGLDLALH------C-DI 125 (598)
Q Consensus 67 ~~~~gnhd~~~gL~aF~-r~F~~~~--~l-~gw~~-----~----Q~~sYfAl~Lp~-~wwLiGLDsql~------g-~i 125 (598)
++++||||+..|.+.+. +..-+-. ++ +.... + .-.+|..++... .-=++|+.+... + .+
T Consensus 109 ~~~~GNHEfd~g~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~ 188 (546)
T 4h2g_A 109 AMALGNHEFDNGVEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETPFLSNPGTNL 188 (546)
T ss_dssp EEECCGGGGTTHHHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEECTTHHHHSCCCSSE
T ss_pred EEeccCcccccCHHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEecccccccccCCCCCc
Confidence 57799999988887776 4332211 11 11111 1 124565555432 144678765311 1 11
Q ss_pred C-HHHHHHHHHHHHhhc-CCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCc
Q 007562 126 D-VYQFKFFAELVKEQV-GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 194 (598)
Q Consensus 126 d-~~Q~~wf~~~l~~~~-~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~ 194 (598)
. ....+-+++.+++.. ..-+.||+++|.+.-. -.++.+.+ ..++|+|+||+|...
T Consensus 189 ~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~------------d~~la~~~--~giDlIlgGHtH~~~ 245 (546)
T 4h2g_A 189 VFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM------------DKLIAQKV--RGVDVVVGGHSNTFL 245 (546)
T ss_dssp EECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH------------HHHHHHHS--TTCCEEECCSSCCCC
T ss_pred EEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc------------hHHHHHhC--CCCcEEEeCCcCccc
Confidence 0 011223333332111 2358999999988321 11232332 459999999999754
No 34
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=91.52 E-value=0.82 Score=50.57 Aligned_cols=112 Identities=15% Similarity=0.200 Sum_probs=57.5
Q ss_pred EecCCCCCCCCChHHHHHhhcccCC---CCccc-----CC--CCCceEEEECCC-cEEEEEeec-c-c------CCC---
Q 007562 67 YIIPGNHDWFDGLNTFMRFICHKSW---LGGWF-----MP--QKKSYFALQLPK-GWWVFGLDL-A-L------HCD--- 124 (598)
Q Consensus 67 ~~~~gnhd~~~gL~aF~r~F~~~~~---l~gw~-----~~--Q~~sYfAl~Lp~-~wwLiGLDs-q-l------~g~--- 124 (598)
++.+||||+..|.+.+.+..-.-.. .+++. .. .-.+|-.++... .-=++|+.+ . . ...
T Consensus 97 ~~tlGNHEfd~G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~~~~~~~~~~p~~~~~f 176 (579)
T 3ztv_A 97 YFTLGNHEFDAGNEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTVNKTVNSSSPGKDVKF 176 (579)
T ss_dssp EEECCSGGGTTHHHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEECSHHHHHHSCCCTTEEE
T ss_pred eeeccccccccCHHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEcCCccccccCCCCCceE
Confidence 4678999998887766654432221 11221 01 113565555432 255778843 1 0 011
Q ss_pred CCHHHHHHHHHHHHhhc-CCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCc
Q 007562 125 IDVYQFKFFAELVKEQV-GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 194 (598)
Q Consensus 125 id~~Q~~wf~~~l~~~~-~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~ 194 (598)
.|. .+-+++.+++.. ..-+.||+++|.+.- .-..+.+.+ ..++++|+||+|...
T Consensus 177 ~d~--~~~~~~~v~~lk~~g~d~iI~l~H~G~~------------~d~~la~~~--~giDlIlgGHtH~~~ 231 (579)
T 3ztv_A 177 YDE--IATAQIMANALKQQGINKIILLSHAGSE------------KNIEIAQKV--NDIDVIVTGDSHYLY 231 (579)
T ss_dssp CCH--HHHHHHHHHHHHTTTCCCEEEEEETCHH------------HHHHHHHHC--SSCCEEEECSSCCEE
T ss_pred cCH--HHHHHHHHHHHHhCCCCEEEEEeccCch------------hhHHHHHhC--CCCCEEEeCCCCccc
Confidence 122 223333332211 224789999998731 111232332 359999999999865
No 35
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=88.57 E-value=1.4 Score=48.77 Aligned_cols=117 Identities=20% Similarity=0.246 Sum_probs=62.2
Q ss_pred EecCCCCCCCCChH---HHHHhhcccC--CCC-ccc--------CCCCCceEEEECC-Cc--EEEEEeecccCCC-----
Q 007562 67 YIIPGNHDWFDGLN---TFMRFICHKS--WLG-GWF--------MPQKKSYFALQLP-KG--WWVFGLDLALHCD----- 124 (598)
Q Consensus 67 ~~~~gnhd~~~gL~---aF~r~F~~~~--~l~-gw~--------~~Q~~sYfAl~Lp-~~--wwLiGLDsql~g~----- 124 (598)
++..||||+..|.+ .+.+.+-+.. .++ +.. .+.-++|-.++.+ +| --++|+.+.....
T Consensus 98 a~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt~~~~~~~~~~~ 177 (557)
T 3c9f_A 98 LLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTR 177 (557)
T ss_dssp EECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTTEE
T ss_pred EEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEeecCCCCCCCCcE
Confidence 56789999988765 3333222111 121 221 0123467677763 33 7788886653221
Q ss_pred -CCHHH---HHHHHHHHHhhcCCCCeEEEEecCCCc-cccccccCCCccchHHHHHhhhCCcee-EEEcCccCCC
Q 007562 125 -IDVYQ---FKFFAELVKEQVGERDSVIIMTHEPNW-LLDWYFNNVSGKNVKHLICDYLKGRCK-LRIAGDMHHY 193 (598)
Q Consensus 125 -id~~Q---~~wf~~~l~~~~~~~~~VIL~tHeP~w-~~~~~~~~~~~~~v~~Li~~~l~~rV~-L~LSGH~HhY 193 (598)
.|..+ .+|++++.+ ..-+-||+++|.+.- ..+. .......+.+.. ..++ |+|+||+|..
T Consensus 178 ~~d~~e~i~~~~v~~l~~---~~~D~IIvL~H~G~~~~~d~------~~~~~~~lA~~~-~giDilIlgGHtH~~ 242 (557)
T 3c9f_A 178 VTPMAETIHEPWFQEALK---HEVDLIIIVGHTPISHNWGE------FYQVHQYLRQFF-PDTIIQYFGGHSHIR 242 (557)
T ss_dssp ECCHHHHTTSHHHHHHTT---SCCSEEEEECSSCCCTTTCH------HHHHHHHHHHHC-TTSEEEEEECSSCCE
T ss_pred ECCHHHHHHHHHHHHHHh---cCCCEEEEecccCccccCcc------ccHHHHHHHHhC-CCCCEEEECCCCCCC
Confidence 13322 246666542 346899999999862 1110 011112122222 4578 5999999986
No 36
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=83.46 E-value=8 Score=39.33 Aligned_cols=108 Identities=19% Similarity=0.169 Sum_probs=55.4
Q ss_pred cCCCCCCCCChHHHHHhhcccC---CCCcccC-C----CCCceEEEECCC-cEEEEEeeccc--CC-CCCHHHHHHHHHH
Q 007562 69 IPGNHDWFDGLNTFMRFICHKS---WLGGWFM-P----QKKSYFALQLPK-GWWVFGLDLAL--HC-DIDVYQFKFFAEL 136 (598)
Q Consensus 69 ~~gnhd~~~gL~aF~r~F~~~~---~l~gw~~-~----Q~~sYfAl~Lp~-~wwLiGLDsql--~g-~id~~Q~~wf~~~ 136 (598)
..|||+|-.|.+.+ . |.++. ..+.... . ..+.|-.++... .-=++|+-.+. .. .++.+ ++-.+++
T Consensus 68 TlGNHefD~g~~~~-~-~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~p-f~~a~~~ 144 (281)
T 1t71_A 68 TMGNHTWFQKLDLA-V-VINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNP-FKVLKEL 144 (281)
T ss_dssp ECCTTTTCCGGGHH-H-HTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCH-HHHHHHH
T ss_pred EEccCcccCCccHH-H-HhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCH-HHHHHHH
Confidence 45999998774322 1 22211 1111110 0 234676677632 14456665442 11 33444 4455565
Q ss_pred HHhhcCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCC
Q 007562 137 VKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 193 (598)
Q Consensus 137 l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY 193 (598)
++ ...-+-||+..|-= .+ ...+.+...+.++|++++.||+|-.
T Consensus 145 v~--~~~~diIIv~~H~g----------~t--~Ek~~la~~~dg~VD~VvGgHTHv~ 187 (281)
T 1t71_A 145 IL--KRDCDLHIVDFHAE----------TT--SEKNAFCMAFDGYVTTIFGTHTHVP 187 (281)
T ss_dssp HT--TCCCSEEEEEEECS----------CH--HHHHHHHHHHTTTSSEEEEESSSSC
T ss_pred Hh--hcCCCEEEEEeCCC----------ch--HHHHHHHHhCCCCeEEEEeCCCCcC
Confidence 54 13346778888831 11 1111223345788999999999953
No 37
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=83.46 E-value=8.5 Score=38.56 Aligned_cols=110 Identities=17% Similarity=0.209 Sum_probs=56.2
Q ss_pred EEecCCCCCCCCC-hHHHHHhhc-ccCCCCccc---CCCCCceEEEECCC-cEEEEEeeccc-CCCCCHHHHHHHHHHHH
Q 007562 66 CYIIPGNHDWFDG-LNTFMRFIC-HKSWLGGWF---MPQKKSYFALQLPK-GWWVFGLDLAL-HCDIDVYQFKFFAELVK 138 (598)
Q Consensus 66 ~~~~~gnhd~~~g-L~aF~r~F~-~~~~l~gw~---~~Q~~sYfAl~Lp~-~wwLiGLDsql-~g~id~~Q~~wf~~~l~ 138 (598)
+.. .|||+|-.+ +..|+..-- ..-..+.+. .+ .+.|-.++... .-=++|+-.+. ...++.+ ++-.+++++
T Consensus 60 a~T-lGNHefD~~~l~~~l~~~~~~~~~~aN~~~~~~p-g~g~~I~~~~G~kIgVigl~g~~~~~~~~~p-~~~~~~~v~ 136 (255)
T 1t70_A 60 CLT-LGNHAWHHKDIYPMLSEDTYPIVRPLNYADPGTP-GVGWRTFDVNGEKLTVVNLLGRVFMEAVDNP-FRTMDALLE 136 (255)
T ss_dssp EEE-CCTTTTSSTTHHHHHHTTCSCEECCSCCCCTTCS-SCSEEEEECSSSEEEEEEEECCTTSCCCSCH-HHHHHHHTT
T ss_pred EEE-eccccccCchHHHHHhhCCCcEEEEeccCCCCCC-CCCeEEEEECCEEEEEEEeecCcCcccccCH-HHHHHHHHH
Confidence 444 499998654 222322110 000123332 22 35676677632 14456664442 2234444 334555554
Q ss_pred hhcCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCC
Q 007562 139 EQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 192 (598)
Q Consensus 139 ~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~Hh 192 (598)
+ + .-+-||+..|- + .+ +..+.+-..+.+++++++.||+|-
T Consensus 137 ~-l-~~d~IIv~~H~-----e-----~t--~Ek~~la~~~dg~vd~VvGgHTHv 176 (255)
T 1t70_A 137 R-D-DLGTVFVDFHA-----E-----AT--SEKEAMGWHLAGRVAAVIGTHTHV 176 (255)
T ss_dssp C-S-SCCEEEEEEEC-----S-----CH--HHHHHHHHHHTTSSSEEEEESSCS
T ss_pred H-h-CCCEEEEEeCC-----C-----Ch--HHHHHHHHhCCCCeEEEEeCCCCc
Confidence 3 4 45678888883 0 11 111122334578999999999995
No 38
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=82.58 E-value=12 Score=37.47 Aligned_cols=111 Identities=18% Similarity=0.226 Sum_probs=57.3
Q ss_pred CeEEecCCCCCCCCC-hHHHHHhh--cccCCCCcccCCCCCceEEEECCCc-EEEEEeecccC-CCCCHHHHHHHHHHHH
Q 007562 64 PQCYIIPGNHDWFDG-LNTFMRFI--CHKSWLGGWFMPQKKSYFALQLPKG-WWVFGLDLALH-CDIDVYQFKFFAELVK 138 (598)
Q Consensus 64 p~~~~~~gnhd~~~g-L~aF~r~F--~~~~~l~gw~~~Q~~sYfAl~Lp~~-wwLiGLDsql~-g~id~~Q~~wf~~~l~ 138 (598)
..+. ..|||+|-.+ +..|+... .....+. -..| .+.|..++.... -=++++-.... ..+|.+ ++-.+++++
T Consensus 58 ~D~~-T~GNHefD~~~l~~~l~~~~~vrpaN~~-~~~p-g~~~~i~~~~G~kIgVi~l~g~~~~~~~~~p-f~~~~~~v~ 133 (252)
T 2z06_A 58 VDLV-SLGNHAWDHKEVYALLESEPVVRPLNYP-PGTP-GKGFWRLEVGGESLLFVQVMGRIFMDPLDDP-FRALDRLLE 133 (252)
T ss_dssp CCEE-ECCTTTTSCTTHHHHHHHSSEECCTTSC-SSCS-SCSEEEEEETTEEEEEEEEECCTTSCCCCCH-HHHHHHHHH
T ss_pred CCEE-EeccEeeECchHHHHhccCCceEeecCC-CCCC-CCCeEEEEECCEEEEEEEcccccCccccCCH-HHHHHHHHH
Confidence 3354 4599998765 22333211 1122211 0122 356767776321 33455533321 134444 444666665
Q ss_pred hhcCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCC
Q 007562 139 EQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 192 (598)
Q Consensus 139 ~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~Hh 192 (598)
+ ++ -+-||+..|- .+ .+..+.+..++.++|++++.||+|-
T Consensus 134 ~-lk-~d~IIv~~H~-g~-----------tsek~~la~~~dg~Vd~VvGgHTHv 173 (252)
T 2z06_A 134 E-EK-ADYVLVEVHA-EA-----------TSEKMALAHYLDGRASAVLGTHTHV 173 (252)
T ss_dssp H-CC-CSEEEEEEEC-SC-----------HHHHHHHHHHHBTTBSEEEEESSCS
T ss_pred H-hC-CCEEEEEeCC-Cc-----------HHHHHHHHHhCCCCeEEEEcCCCCc
Confidence 3 44 6677777773 11 1112223445578999999999996
No 39
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=82.56 E-value=5.6 Score=41.17 Aligned_cols=120 Identities=16% Similarity=0.189 Sum_probs=59.7
Q ss_pred EecCCCCCCCCChHHHHHhhcccCC---CCccc-----CCCCCceEEEEC-----C---Cc--EEEEEeeccc-------
Q 007562 67 YIIPGNHDWFDGLNTFMRFICHKSW---LGGWF-----MPQKKSYFALQL-----P---KG--WWVFGLDLAL------- 121 (598)
Q Consensus 67 ~~~~gnhd~~~gL~aF~r~F~~~~~---l~gw~-----~~Q~~sYfAl~L-----p---~~--wwLiGLDsql------- 121 (598)
.+.+||||+..|++.+.+.+.+-.. .+... .+.-.+|-.++. . +| -=+||+-...
T Consensus 96 ~~t~GNHEfd~G~~~l~~~~~~a~fp~l~aNv~~~~~g~~~~~py~I~~~~v~~~~G~~~gvkIgviG~~~p~~~~~~~~ 175 (339)
T 3jyf_A 96 VGNLGNHEFNYGLDFLHKALAGAKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIHTLRIGYIGFVPPQIMTWDKA 175 (339)
T ss_dssp EEECCGGGGTTCHHHHHHHHHTCSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTSCEEEEEEEEEEECCTTHHHHTHH
T ss_pred EEecchhhhhccHHHHHHHHHhcCCceeeeeeeecCCCCcccCCeEEEEEEeeccCCCcCCeEEEEEecccCcccccccc
Confidence 4467999999898877765543221 12221 122245644443 1 12 3356664321
Q ss_pred --CCC---CCH--HHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCCc
Q 007562 122 --HCD---IDV--YQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 194 (598)
Q Consensus 122 --~g~---id~--~Q~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY~ 194 (598)
.+. .|. .=.+|..++ ++ ..-+-||+++|--. ..+... ....+...++.+. ..++++++||+|...
T Consensus 176 ~~~g~~~~~d~~e~~~~~v~~l-r~--~g~D~II~l~H~G~-~~d~~~--~~~en~~~~~~~v--~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 176 NLNGKVTVNDITETARKYIPEM-RA--KGADVVVVVAHSGL-SADPYQ--AMAENSVYYLSQV--PGVDAIMFGHAHAVF 247 (339)
T ss_dssp HHTTTEEECCHHHHHHHHHHHH-HH--TTCSEEEEEECCCC-CCSCCC--TTCSCCHHHHTTS--TTCCEEEECSSCSEE
T ss_pred cccCCeEEcCHHHHHHHHHHHH-Hh--cCCCEEEEEeccCc-cccccc--cccchhHHHHhhC--CCCCEEEeCCCcccc
Confidence 121 122 112333332 22 23577888888764 222211 1122333333332 469999999999753
No 40
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=80.94 E-value=2.3 Score=42.24 Aligned_cols=68 Identities=9% Similarity=0.076 Sum_probs=38.6
Q ss_pred CCCCHHHHHHHHHHHHhh-cCCCCeEEEEecCCCccccccccC-CCccchHHHHHhhhCCceeEEEcCccCC
Q 007562 123 CDIDVYQFKFFAELVKEQ-VGERDSVIIMTHEPNWLLDWYFNN-VSGKNVKHLICDYLKGRCKLRIAGDMHH 192 (598)
Q Consensus 123 g~id~~Q~~wf~~~l~~~-~~~~~~VIL~tHeP~w~~~~~~~~-~~~~~v~~Li~~~l~~rV~L~LSGH~Hh 192 (598)
..+++.|++||+++.... +.-++.-|+++|...-.. .... ......+.+.+.+.+..++++++||+|.
T Consensus 106 ~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~~--~~~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~ 175 (270)
T 3qfm_A 106 EEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKN--WGRELIHTGKQEEFDRLVTHPPCDIAVYGHIHQ 175 (270)
T ss_dssp TTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTBS--SSSTTSTTCCHHHHHHTTTTTTCSEEECCSSCS
T ss_pred HHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCCC--CCceecCCCcHHHHHHHhcccCCCEEEECCcCc
Confidence 456789999999876432 232455566777654322 0000 0111222333333356899999999995
No 41
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=80.58 E-value=8.4 Score=39.80 Aligned_cols=120 Identities=16% Similarity=0.082 Sum_probs=59.4
Q ss_pred EecCCCCCCCCChHHHHHhhcccCC---CCccc----CCCCCceEEEEC-----C---Cc--EEEEEeeccc--------
Q 007562 67 YIIPGNHDWFDGLNTFMRFICHKSW---LGGWF----MPQKKSYFALQL-----P---KG--WWVFGLDLAL-------- 121 (598)
Q Consensus 67 ~~~~gnhd~~~gL~aF~r~F~~~~~---l~gw~----~~Q~~sYfAl~L-----p---~~--wwLiGLDsql-------- 121 (598)
.+..||||+-.|++.+.+.+.+-.. .+... .+.-.+|-.++. . +| -=++|+-...
T Consensus 103 a~tlGNHEfd~G~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~py~I~~~~~~~~~G~~~gvkIgviG~t~~~~~~~~~~~ 182 (341)
T 3gve_A 103 AGTLGNHEFNYGLDFLDGTIKGADFPIVNANVKTTSGENRYTPYVINEKTLIDENGNEQKVKVGYIGFVPPQIMTWDKKN 182 (341)
T ss_dssp BEECCGGGGTTCHHHHHHHHHTCSSCEECSSEECTTSCBSSCCEEEEEEEEECTTSCEEEEEEEEEEECCTTHHHHTHHH
T ss_pred eeeccchhhccCHHHHHHHHHhcCCCEEEEeeECCCCCCccCCeEEEEEeeeccCCCcCCeEEEEEEeccCccccccccc
Confidence 3568999999998887776543221 11221 122245644443 1 12 3356664321
Q ss_pred -CCC---CCH-HH-HHHHHHHHHhhcCCCCeEEEEecCCCccccccccCCCccc-hHHHHHhhhCCceeEEEcCccCCCc
Q 007562 122 -HCD---IDV-YQ-FKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKN-VKHLICDYLKGRCKLRIAGDMHHYM 194 (598)
Q Consensus 122 -~g~---id~-~Q-~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~-v~~Li~~~l~~rV~L~LSGH~HhY~ 194 (598)
.+. .|. +. .++.+++ ++ ..-+-||+++|--.= .+... ....+ ...|-+++ ..++++++||+|...
T Consensus 183 ~~~~~~~~d~~~~~~~~v~~L-k~--~g~D~II~l~H~G~~-~d~~~--~~~e~~~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 183 LEGQVQVQDIVESANETIPKM-KA--EGADVIIALAHTGIE-KQAQS--SGAENAVFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp HTTTCEECCHHHHHHHHHHHH-HH--TTCSEEEEEECCCCC-SSCCC--TTCSSCHHHHHHHC--SCCCEEEECSSCCEE
T ss_pred ccCceEEcCHHHHHHHHHHHH-Hh--cCCCEEEEEeccCcc-ccccc--cccchhHHHHHhcC--CCCcEEEECCCCccC
Confidence 111 122 11 2233222 22 235788888987642 22111 11112 22343333 459999999999753
No 42
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=72.77 E-value=1.4 Score=42.02 Aligned_cols=35 Identities=11% Similarity=0.142 Sum_probs=21.7
Q ss_pred CCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCC
Q 007562 144 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 193 (598)
Q Consensus 144 ~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY 193 (598)
+...|+++|.+.+..+. +. .+ .+.++++.||+|..
T Consensus 121 ~g~~i~l~Hg~~~~~~~---------l~----~~--~~~d~vi~GHtH~~ 155 (208)
T 1su1_A 121 EKQRLFLTHGHLFGPEN---------LP----AL--NQNDVLVYGHTHLP 155 (208)
T ss_dssp SSCEEEEECSSSSBTTB---------CC----CC--CTTCEEECCSSCCC
T ss_pred CCcEEEEECCCCCCcch---------hh----hh--cCCCEEEECCcccC
Confidence 34678888988764311 10 11 13489999999964
No 43
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=72.71 E-value=24 Score=38.06 Aligned_cols=110 Identities=13% Similarity=0.119 Sum_probs=57.7
Q ss_pred EecCCCCCCCCChHHHHHhhcccCC----CCccc---------CCCCCceEEEECCCc-EEEEEeeccc-------CCCC
Q 007562 67 YIIPGNHDWFDGLNTFMRFICHKSW----LGGWF---------MPQKKSYFALQLPKG-WWVFGLDLAL-------HCDI 125 (598)
Q Consensus 67 ~~~~gnhd~~~gL~aF~r~F~~~~~----l~gw~---------~~Q~~sYfAl~Lp~~-wwLiGLDsql-------~g~i 125 (598)
.+.+||||+-.|++.+++.+..... .+... .+.-.+|-.++...- -=+||+-+.. ...+
T Consensus 87 a~~lGNHEFd~G~~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~~~~~~~~~~~~ 166 (530)
T 4h1s_A 87 AMALGNHEFDNGVEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETPFLSNPGTNL 166 (530)
T ss_dssp EEECCGGGGTTTTHHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTTHHHHSCCCTTE
T ss_pred EEEEchhhhccCHHHHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccceeeeccCCCCc
Confidence 5679999998898888765443331 11221 112235655555321 3356664321 1111
Q ss_pred ---CH--HHHHHHHHHHHhhcCCCCeEEEEecCCCccccccccCCCccchHHHHHhhhCCceeEEEcCccCCC
Q 007562 126 ---DV--YQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 193 (598)
Q Consensus 126 ---d~--~Q~~wf~~~l~~~~~~~~~VIL~tHeP~w~~~~~~~~~~~~~v~~Li~~~l~~rV~L~LSGH~HhY 193 (598)
|. .-.++.+++ ++ ..-+-||+++|.-. ++-..+.+++ ..++++++||+|.+
T Consensus 167 ~f~d~v~~~~~~v~~L-r~--~g~D~II~LsH~G~------------~~d~~la~~v--~giD~IlgGHsH~~ 222 (530)
T 4h1s_A 167 VFEDEITALQPEVDKL-KT--LNVNKIIALGHSGF------------EMDKLIAQKV--RGVDVVVGGHSNTF 222 (530)
T ss_dssp EECCHHHHHHHHHHHH-HH--TTCCCEEEEEESCH------------HHHHHHHHHS--TTCCEEECCSSCCC
T ss_pred ccCcHHHHHHHHHhhh-hh--cCCCEEEEeccCCc------------hHHHHHHhcC--CCCCeeccCCccce
Confidence 32 123344433 32 23478999999631 1111222221 45899999999975
No 44
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=47.01 E-value=5 Score=39.75 Aligned_cols=12 Identities=17% Similarity=-0.050 Sum_probs=10.1
Q ss_pred eEEecCCCCCCC
Q 007562 65 QCYIIPGNHDWF 76 (598)
Q Consensus 65 ~~~~~~gnhd~~ 76 (598)
++++|+||||.+
T Consensus 67 ~~~~v~GNhD~~ 78 (270)
T 3qfm_A 67 ITARVLGNWEDS 78 (270)
T ss_dssp EEEECCCHHHHH
T ss_pred CEEEEcCChHHH
Confidence 389999999964
No 45
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=43.17 E-value=7.9 Score=36.52 Aligned_cols=14 Identities=14% Similarity=-0.017 Sum_probs=11.2
Q ss_pred ceeEEEcCccCCCc
Q 007562 181 RCKLRIAGDMHHYM 194 (598)
Q Consensus 181 rV~L~LSGH~HhY~ 194 (598)
.+++++.||+|...
T Consensus 178 ~~~~vv~GHth~~~ 191 (221)
T 1g5b_A 178 GADTFIFGHTPAVK 191 (221)
T ss_dssp TSSEEEECSSCCSS
T ss_pred CCCEEEECCCCCcc
Confidence 46789999999643
No 46
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=26.76 E-value=14 Score=36.22 Aligned_cols=11 Identities=45% Similarity=0.652 Sum_probs=9.7
Q ss_pred EEecCCCCCCC
Q 007562 66 CYIIPGNHDWF 76 (598)
Q Consensus 66 ~~~~~gnhd~~ 76 (598)
+++|+||||.+
T Consensus 75 ~~~v~GNHd~~ 85 (262)
T 2qjc_A 75 AYSVLGNHDAK 85 (262)
T ss_dssp CEECCCHHHHH
T ss_pred CEEEeCcChHH
Confidence 89999999953
No 47
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=24.76 E-value=1e+02 Score=27.40 Aligned_cols=43 Identities=19% Similarity=0.102 Sum_probs=33.1
Q ss_pred EEEeecccCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCc
Q 007562 114 VFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNW 156 (598)
Q Consensus 114 LiGLDsql~g~id~~Q~~wf~~~l~~~~~~~~~VIL~tHeP~w 156 (598)
++-||.-.....|..+.+-+.+++.+....+.++|+.+|.|.-
T Consensus 103 llilDE~~~~~~~~~~~~~l~~ll~~~~~~~~~ii~tsn~~~~ 145 (180)
T 3ec2_A 103 VLVLDDLGSERLSDWQRELISYIITYRYNNLKSTIITTNYSLQ 145 (180)
T ss_dssp EEEEETCSSSCCCHHHHHHHHHHHHHHHHTTCEEEEECCCCSC
T ss_pred EEEEeCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEcCCChh
Confidence 7889985444678877778888776655678899999999864
Done!