Query 007565
Match_columns 598
No_of_seqs 298 out of 1649
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 04:56:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007565.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007565hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkt_A Multi antimicrobial ext 100.0 1.9E-44 6.6E-49 387.9 37.8 417 138-577 8-443 (460)
2 3mkt_A Multi antimicrobial ext 99.8 3E-17 1E-21 175.7 21.6 208 138-367 234-447 (460)
3 1pw4_A Glycerol-3-phosphate tr 87.9 24 0.00084 35.6 29.7 25 551-575 408-432 (451)
4 4aps_A DI-OR tripeptide H+ sym 40.4 3E+02 0.01 27.7 26.5 22 551-572 446-467 (491)
5 2k1k_A Ephrin type-A receptor 33.4 51 0.0018 20.9 3.6 24 341-364 13-36 (38)
6 2ks1_B Epidermal growth factor 21.2 1.7E+02 0.0058 19.2 4.5 27 341-367 13-39 (44)
7 2jwa_A Receptor tyrosine-prote 19.7 1.8E+02 0.006 19.2 4.3 15 353-367 25-39 (44)
8 2l2t_A Receptor tyrosine-prote 18.1 2.2E+02 0.0075 18.7 4.6 12 356-367 27-38 (44)
9 3o7q_A L-fucose-proton symport 15.3 7.7E+02 0.026 23.8 29.2 31 143-173 27-57 (438)
10 1nkz_B Light-harvesting protei 9.9 3.8E+02 0.013 17.3 3.7 32 234-265 8-39 (41)
No 1
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=100.00 E-value=1.9e-44 Score=387.93 Aligned_cols=417 Identities=19% Similarity=0.223 Sum_probs=379.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccChhhhhhhhhHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhhhhh
Q 007565 138 QDAKNELIVLTLPAIAGQVIDPLAQLMETAYVGRLGSVELASAGVSISIFNIVSKLFNIPLLSVATSFVAEDIAKNLTKD 217 (598)
Q Consensus 138 ~~~~~~l~~~a~p~~~~~l~~~l~~~vd~~~vg~lg~~~laa~~~a~~i~~~~~~~~~~gl~~~~~~~va~~~~~~~~~~ 217 (598)
++..|++++.++|.++++++..+++++|+.+++|+|++++|+++++.++...+..+ ..|+..+..+.+++++++++
T Consensus 8 ~~~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~lg~~~~~~~~~~~~i~~~~~~~-~~g~~~~~~~~is~~~g~~~--- 83 (460)
T 3mkt_A 8 KKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILF-GVGLLMALVPVVAQLNGAGR--- 83 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTSSHHHHHHHHHHHHHHH-HHHHHHHHGGGCTTTTSSSS---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCC---
Confidence 35589999999999999999999999999999999999999999999997766544 55788888999998887766
Q ss_pred hhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHhhcCCCCCccchhHHHHHHHHHHhhHHHHH
Q 007565 218 LAAGLEGNGKPPNGTTERKQLSSVSTALLLAVGIGIFEAAALSLASGPFLNLMGVPSASAMHGPAKKFLMLRALGSPAFV 297 (598)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~a~~yl~~~~~~~~~~~ 297 (598)
+++.++.+++++.+.++++++.+++ ++++++++.+++.+++ ..+.+..|+++++++.++..
T Consensus 84 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~--~~~~~~~~l~i~~~~~~~~~ 144 (460)
T 3mkt_A 84 ----------------QHKIPFEVHQGLILALLVSVPIIAV-LFQTQFIIRFMDVEEA--MATKTVGYMHAVIFAVPAYL 144 (460)
T ss_dssp ----------------TTTHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTCSSCSSTTH--HHHHHHHHHTTGGGHHHHHH
T ss_pred ----------------hhHHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHHH
Confidence 6778889999999999999997765 7788999998877665 78889999999999999999
Q ss_pred HHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHhh-c---CCChhHHHHHHHHHHHHHHHHHHHHHhhccccCC--
Q 007565 298 VSLALQGIFRGFKDTKTPVLCLGIGNLLAVFLFPILIYF-C---QLGMPGAAISTVVSQYIVAVTMIWFLNKKVVLMP-- 371 (598)
Q Consensus 298 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~l~~lli~~-~---~~Gi~Gaa~at~is~~~~~~~~~~~l~~~~~~~~-- 371 (598)
+...+++++|+.||++.+++.+++++++|+++++++++. + ++|+.|+++|+++++++..++.++++++++...+
T Consensus 145 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~ 224 (460)
T 3mkt_A 145 LFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVK 224 (460)
T ss_dssp HHHHHTTTTCTTSCCTTTHHHHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCC
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhh
Confidence 999999999999999999999999999999999999975 3 7999999999999999999999888876543221
Q ss_pred -----CCccchhhhhhHhhcHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007565 372 -----PKMGALQFGDYVKSGGFLLGRTLAVLITMTLGTSMAARQGSDAMAAHQICMQVWLAVSLLTDALAASGQALIASY 446 (598)
Q Consensus 372 -----~~~~~~~~~~~lk~~~p~~~~~~~~~i~~~i~~~i~~~~g~~~vaa~~i~~~i~~~~~~~~~~l~~a~~p~is~~ 446 (598)
.++++..+|+++++++|.+++.+...+.+.+++.+++++|++++++|+++.++.++..++..+++++..|.++++
T Consensus 225 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~~~~~~~~~~a~~p~i~~~ 304 (460)
T 3mkt_A 225 VFETFHKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHK 304 (460)
T ss_dssp CSCCCCSSTTSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 144566889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCChHHHHHHHHHHHHHHhhhHHHHHHHHHHhHHhhcC
Q 007565 447 VSKGDFKTVREITNFVLKIGVLTGVSLATILGLSFGSLAPLFTKDPKVLGIVGTGVLFVSASQPINALAFIFDGLHYGVS 526 (598)
Q Consensus 447 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~l~~lf~~d~~v~~~~~~~l~i~~~~~~~~~~~~i~~~~l~~~g 526 (598)
+|++|++++++..++++++++.++++.++++.++++++..+|++|+++.+.+..++++++++.++.+++.+..+++++.|
T Consensus 305 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g 384 (460)
T 3mkt_A 305 LGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYK 384 (460)
T ss_dssp HHSSCCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGS
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHH-HHHHHHHHhhccC-------CChHHHHHHHHHHHHHHHHHHHHHH
Q 007565 527 DFRYAACSMMLVG-AMSSTFLLYAPRA-------TGLPGVWAGLTLFMGLRTVAGFVRL 577 (598)
Q Consensus 527 ~~~~~~~~~~~~~-l~~~~~~~~l~~~-------~Gi~G~~~a~~i~~~v~~~~~~~~l 577 (598)
|++.+++...+.. ++.+++.+++.+. +|+.|+|+++.+++++..++..+++
T Consensus 385 ~~~~~~~~~~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~ 443 (460)
T 3mkt_A 385 DMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRL 443 (460)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988877 6777777776665 9999999999999999888776665
No 2
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.76 E-value=3e-17 Score=175.73 Aligned_cols=208 Identities=17% Similarity=0.119 Sum_probs=189.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccChhhhhhhhhHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhhhhh
Q 007565 138 QDAKNELIVLTLPAIAGQVIDPLAQLMETAYVGRLGSVELASAGVSISIFNIVSKLFNIPLLSVATSFVAEDIAKNLTKD 217 (598)
Q Consensus 138 ~~~~~~l~~~a~p~~~~~l~~~l~~~vd~~~vg~lg~~~laa~~~a~~i~~~~~~~~~~gl~~~~~~~va~~~~~~~~~~ 217 (598)
.+..|++++.++|.++..+...+...+|+.+++++|++++|+++++..+.++...+ ..++..+..+.+++.+|+++
T Consensus 234 ~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~~~~-~~~~~~a~~p~i~~~~g~~~--- 309 (460)
T 3mkt_A 234 PKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMF-PMSIGAAVSIRVGHKLGEQD--- 309 (460)
T ss_dssp TSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSSC---
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCC---
Confidence 45578899999999999999999999999999999999999999999999988854 55899999999999999887
Q ss_pred hhhccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHhhcCCCCCccchhHHHHHHHHHHhhHHHHH
Q 007565 218 LAAGLEGNGKPPNGTTERKQLSSVSTALLLAVGIGIFEAAALSLASGPFLNLMGVPSASAMHGPAKKFLMLRALGSPAFV 297 (598)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~a~~yl~~~~~~~~~~~ 297 (598)
+++.++.+..++.+.++++++.+++++++++++..++..+++ +.+.+..++++.+++.++..
T Consensus 310 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~~~~~l~~~~~~~~~~~ 371 (460)
T 3mkt_A 310 ----------------TKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQV--VVALAMQLLLFAAIYQCMDA 371 (460)
T ss_dssp ----------------CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCST--THHHHHHHHHHHHHHHHHHH
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--HHHHHHHHHHHHHHHHHHHH
Confidence 677888899999999999999999999999999999876654 78899999999999999999
Q ss_pred HHHHHHHHHhccCCChhHHHHHHHHH-HHHHHHHHHHHhh----cC-CChhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007565 298 VSLALQGIFRGFKDTKTPVLCLGIGN-LLAVFLFPILIYF----CQ-LGMPGAAISTVVSQYIVAVTMIWFLNKKV 367 (598)
Q Consensus 298 l~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~l~~lli~~----~~-~Gi~Gaa~at~is~~~~~~~~~~~l~~~~ 367 (598)
+.....+++++.||++.+++..+++. ++++.++++++.. ++ +|+.|+++|+.+++.+..++..+.++|+.
T Consensus 372 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~~ 447 (460)
T 3mkt_A 372 VQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQ 447 (460)
T ss_dssp HHHHHHHHHGGGSTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSSC
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988 9999999999986 66 99999999999999999988877766544
No 3
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=87.93 E-value=24 Score=35.58 Aligned_cols=25 Identities=16% Similarity=-0.060 Sum_probs=13.3
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHH
Q 007565 551 RATGLPGVWAGLTLFMGLRTVAGFV 575 (598)
Q Consensus 551 ~~~Gi~G~~~a~~i~~~v~~~~~~~ 575 (598)
...|....++...+..++..++.++
T Consensus 408 ~~~g~~~~~~~~~~~~~~~~~~~~~ 432 (451)
T 1pw4_A 408 DFFGWDGGFMVMIGGSILAVILLIV 432 (451)
T ss_dssp HSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 4467666666555555544444433
No 4
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=40.42 E-value=3e+02 Score=27.67 Aligned_cols=22 Identities=9% Similarity=-0.067 Sum_probs=9.5
Q ss_pred cCCChHHHHHHHHHHHHHHHHH
Q 007565 551 RATGLPGVWAGLTLFMGLRTVA 572 (598)
Q Consensus 551 ~~~Gi~G~~~a~~i~~~v~~~~ 572 (598)
...+....+.......++..++
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~ 467 (491)
T 4aps_A 446 NAKSEVAYFSYFGLGSVVLGIV 467 (491)
T ss_dssp GGSSTTHHHHHTHHHHHHHHHH
T ss_pred hcccHHHHHHHHHHHHHHHHHH
Confidence 3445444544444444433333
No 5
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=33.44 E-value=51 Score=20.93 Aligned_cols=24 Identities=0% Similarity=0.088 Sum_probs=13.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh
Q 007565 341 MPGAAISTVVSQYIVAVTMIWFLN 364 (598)
Q Consensus 341 i~Gaa~at~is~~~~~~~~~~~l~ 364 (598)
+.|+.++.+++-.+...+.+++.+
T Consensus 13 IAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eeeeehHHHHHHHHHHHHHHHHee
Confidence 456666666665555555544433
No 6
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=21.22 E-value=1.7e+02 Score=19.20 Aligned_cols=27 Identities=11% Similarity=0.321 Sum_probs=12.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007565 341 MPGAAISTVVSQYIVAVTMIWFLNKKV 367 (598)
Q Consensus 341 i~Gaa~at~is~~~~~~~~~~~l~~~~ 367 (598)
+.+..++-++...+..+..+++++|++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 334444444444444444555555544
No 7
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=19.72 E-value=1.8e+02 Score=19.16 Aligned_cols=15 Identities=7% Similarity=0.279 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHhhcc
Q 007565 353 YIVAVTMIWFLNKKV 367 (598)
Q Consensus 353 ~~~~~~~~~~l~~~~ 367 (598)
++..+...++++|++
T Consensus 25 vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 25 VVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhheehhh
Confidence 333444455565554
No 8
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=18.12 E-value=2.2e+02 Score=18.70 Aligned_cols=12 Identities=17% Similarity=0.421 Sum_probs=4.9
Q ss_pred HHHHHHHHhhcc
Q 007565 356 AVTMIWFLNKKV 367 (598)
Q Consensus 356 ~~~~~~~l~~~~ 367 (598)
.+..+++++|++
T Consensus 27 ~~~~~~~~RRRr 38 (44)
T 2l2t_A 27 GLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHhhhhh
Confidence 333344444433
No 9
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=15.32 E-value=7.7e+02 Score=23.80 Aligned_cols=31 Identities=10% Similarity=0.099 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhccC
Q 007565 143 ELIVLTLPAIAGQVIDPLAQLMETAYVGRLG 173 (598)
Q Consensus 143 ~l~~~a~p~~~~~l~~~l~~~vd~~~vg~lg 173 (598)
.++....-.++..+.......+-..+..++|
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 57 (438)
T 3o7q_A 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFT 57 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Confidence 3444444344444433344443333333344
No 10
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=9.89 E-value=3.8e+02 Score=17.25 Aligned_cols=32 Identities=9% Similarity=-0.038 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHchHH
Q 007565 234 ERKQLSSVSTALLLAVGIGIFEAAALSLASGP 265 (598)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 265 (598)
.++..+.+.+++..-..++++.=++.+...|+
T Consensus 8 A~EfH~~~~~~~~~F~~iA~vAH~l~w~wrPW 39 (41)
T 1nkz_B 8 SEELHKYVIDGTRVFLGLALVAHFLAFSATPW 39 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 57778888888888888888877777766554
Done!