Query 007567
Match_columns 598
No_of_seqs 355 out of 2510
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 04:59:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007567.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007567hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qe2_A CPR, P450R, NADPH--cyto 100.0 4.2E-93 1.4E-97 805.8 48.8 469 99-589 13-491 (618)
2 2bpo_A CPR, P450R, NADPH-cytoc 100.0 6.5E-88 2.2E-92 771.1 45.4 464 98-590 43-550 (682)
3 1tll_A Nitric-oxide synthase, 100.0 8.9E-86 3E-90 753.7 45.3 463 101-589 8-525 (688)
4 3qfs_A CPR, P450R, NADPH--cyto 100.0 7.8E-63 2.7E-67 538.6 33.1 305 277-589 19-331 (458)
5 2qtl_A MSR;, methionine syntha 100.0 6.7E-58 2.3E-62 509.5 27.2 283 305-590 104-404 (539)
6 4dql_A Bifunctional P-450/NADP 100.0 7.2E-55 2.5E-59 468.6 26.1 258 314-590 5-266 (393)
7 1f20_A Nitric-oxide synthase; 100.0 1.7E-54 5.8E-59 471.7 26.2 272 309-589 24-304 (435)
8 1ddg_A Sulfite reductase (NADP 100.0 8.7E-51 3E-55 434.5 26.7 248 308-590 4-253 (374)
9 3hr4_A Nitric oxide synthase, 100.0 4.2E-35 1.5E-39 290.0 17.3 155 101-267 37-191 (219)
10 1bvy_F Protein (cytochrome P45 100.0 1.6E-28 5.5E-33 238.8 15.1 147 103-261 20-167 (191)
11 1ykg_A SIR-FP, sulfite reducta 99.9 1.2E-26 4E-31 220.4 15.2 150 103-264 8-157 (167)
12 2hna_A Protein MIOC, flavodoxi 99.9 9.9E-27 3.4E-31 215.8 7.2 144 104-260 1-146 (147)
13 3f6r_A Flavodoxin; FMN binding 99.9 2.8E-24 9.5E-29 199.1 13.3 142 104-259 1-147 (148)
14 1f4p_A Flavodoxin; electron tr 99.9 3.6E-22 1.2E-26 184.4 13.0 141 105-258 1-145 (147)
15 2wc1_A Flavodoxin; electron tr 99.9 4E-22 1.4E-26 191.4 9.5 146 104-263 1-179 (182)
16 1yob_A Flavodoxin 2, flavodoxi 99.9 1.1E-21 3.9E-26 188.0 10.5 143 105-261 1-176 (179)
17 2fcr_A Flavodoxin; electron tr 99.9 4.6E-21 1.6E-25 182.6 14.2 140 106-260 1-171 (173)
18 1ag9_A Flavodoxin; electron tr 99.8 3.5E-21 1.2E-25 183.9 12.4 143 105-262 1-169 (175)
19 2bmv_A Flavodoxin; electron tr 99.8 2.2E-21 7.5E-26 183.0 9.6 138 104-260 1-163 (164)
20 1obo_A Flavodoxin; electron tr 99.8 1.8E-20 6E-25 177.2 13.8 142 105-261 2-168 (169)
21 1czn_A Flavodoxin; FMN binding 99.8 2.2E-20 7.4E-25 176.6 12.2 142 105-260 1-167 (169)
22 5nul_A Flavodoxin; electron tr 99.8 6.9E-18 2.3E-22 154.1 14.7 117 107-240 1-118 (138)
23 3jqq_A Ferredoxin NADP reducta 99.7 8.6E-18 2.9E-22 175.2 15.2 182 309-590 9-196 (316)
24 2bmw_A Ferredoxin--NADP reduct 99.7 3.2E-17 1.1E-21 169.3 15.7 153 309-588 15-172 (304)
25 2xod_A NRDI protein, NRDI; fla 99.7 9.5E-18 3.2E-22 150.2 8.2 116 107-257 1-117 (119)
26 1fnb_A Ferredoxin-NADP+ reduct 99.7 7.2E-17 2.4E-21 167.6 15.8 154 309-590 31-188 (314)
27 3hly_A Flavodoxin-like domain; 99.7 9.5E-17 3.2E-21 151.3 12.7 142 105-262 1-144 (161)
28 3fni_A Putative diflavin flavo 99.7 1.4E-16 4.6E-21 150.1 12.3 143 104-262 4-149 (159)
29 2rc5_A Ferredoxin-NADP reducta 99.7 4.6E-16 1.6E-20 161.4 15.8 160 310-589 16-190 (314)
30 3vo2_A Putative uncharacterize 99.7 4.8E-16 1.6E-20 161.3 15.9 153 309-589 27-183 (310)
31 2fz5_A Flavodoxin; alpha/beta 99.7 8.1E-16 2.8E-20 139.4 14.7 132 107-257 2-135 (137)
32 2b5o_A FNR, ferredoxin--NADP r 99.6 9.1E-16 3.1E-20 165.1 15.5 155 309-590 116-276 (402)
33 1rlj_A NRDI protein; flavoprot 99.6 1.2E-16 4E-21 147.5 7.3 121 104-258 8-129 (139)
34 1ycg_A Nitric oxide reductase; 99.4 1.2E-12 4E-17 139.4 13.4 119 104-236 251-369 (398)
35 1e5d_A Rubredoxin\:oxygen oxid 99.4 2.3E-12 7.9E-17 137.3 15.4 145 104-262 252-398 (402)
36 3n3a_C Protein NRDI; ribonucle 99.4 2.8E-12 9.4E-17 119.0 11.6 98 104-226 20-122 (153)
37 2ark_A Flavodoxin; FMN, struct 99.4 1.4E-11 4.9E-16 118.2 16.8 149 104-264 4-169 (188)
38 4dik_A Flavoprotein; TM0755, e 99.4 4.2E-12 1.4E-16 136.9 14.5 122 103-236 264-386 (410)
39 3lo8_A Ferredoxin--NADP reduct 99.4 9.6E-13 3.3E-17 136.2 9.0 95 490-590 83-186 (311)
40 2a5l_A Trp repressor binding p 99.3 2E-11 6.9E-16 117.5 16.3 128 104-235 5-145 (200)
41 2ohh_A Type A flavoprotein FPR 99.3 2E-11 6.9E-16 130.1 13.8 148 102-260 254-402 (404)
42 2q9u_A A-type flavoprotein; fl 99.3 3.8E-11 1.3E-15 128.7 15.2 146 103-262 255-405 (414)
43 3b6i_A Flavoprotein WRBA; flav 99.2 9.7E-11 3.3E-15 112.5 14.8 125 104-234 1-140 (198)
44 2zki_A 199AA long hypothetical 99.2 1.8E-10 6E-15 111.0 15.2 126 104-235 4-144 (199)
45 3d7n_A Flavodoxin, WRBA-like p 99.2 1.4E-10 5E-15 111.8 13.7 122 103-234 5-127 (193)
46 1ydg_A Trp repressor binding p 99.2 2.4E-10 8.1E-15 111.3 14.6 128 103-235 5-152 (211)
47 4eh1_A Flavohemoprotein; struc 99.2 2.4E-11 8.1E-16 120.7 7.2 88 490-590 52-140 (243)
48 1ep3_B Dihydroorotate dehydrog 99.2 1.6E-11 5.5E-16 124.0 5.7 84 490-589 50-135 (262)
49 2r6h_A NADH:ubiquinone oxidore 99.2 3.1E-11 1.1E-15 123.2 7.7 94 488-589 82-181 (290)
50 3klb_A Putative flavoprotein; 99.2 1.2E-10 4.2E-15 109.4 11.2 133 104-256 4-160 (162)
51 1umk_A B5R, NADH-cytochrome B5 99.1 2.9E-11 1E-15 122.5 6.7 92 491-589 64-171 (275)
52 1gvh_A Flavohemoprotein; oxido 99.1 4E-11 1.4E-15 128.1 7.7 83 490-589 201-284 (396)
53 1tvc_A Methane monooxygenase c 99.1 4.5E-11 1.5E-15 119.6 7.5 94 480-589 47-142 (250)
54 1cqx_A Flavohemoprotein; globi 99.1 4.4E-11 1.5E-15 128.1 7.6 86 491-588 204-290 (403)
55 2eix_A NADH-cytochrome B5 redu 99.1 6.2E-11 2.1E-15 117.8 7.8 82 492-589 60-141 (243)
56 2vzf_A NADH-dependent FMN redu 99.1 2.4E-10 8.2E-15 110.6 11.5 123 104-235 2-138 (197)
57 2cnd_A NADH-dependent nitrate 99.1 5E-11 1.7E-15 120.4 6.8 91 491-589 60-161 (270)
58 4ici_A Putative flavoprotein; 99.1 4.3E-10 1.5E-14 106.8 12.8 135 102-256 11-168 (171)
59 4g1v_A Flavohemoglobin; three 99.1 8.8E-11 3E-15 125.7 7.6 90 490-590 204-298 (399)
60 1fdr_A Flavodoxin reductase; f 99.1 6.7E-11 2.3E-15 117.9 6.0 81 491-588 48-130 (248)
61 1krh_A Benzoate 1,2-dioxygenas 99.1 8.9E-11 3E-15 122.8 6.9 93 480-590 142-236 (338)
62 1qfj_A Protein (flavin reducta 99.1 6.5E-11 2.2E-15 116.8 4.8 95 479-589 32-127 (232)
63 1t5b_A Acyl carrier protein ph 99.1 3.2E-09 1.1E-13 101.9 16.1 157 104-262 1-197 (201)
64 2pia_A Phthalate dioxygenase r 99.0 1.9E-10 6.6E-15 119.7 6.1 95 479-590 41-137 (321)
65 2bgi_A Ferredoxin-NADP(H) redu 99.0 2E-10 6.9E-15 116.5 5.2 82 491-589 62-145 (272)
66 4fk8_A Ferredoxin--NADP reduct 99.0 2.2E-10 7.7E-15 115.8 4.9 81 491-588 64-146 (271)
67 2qdx_A Ferredoxin reductase; o 99.0 2E-10 6.9E-15 115.3 4.3 81 491-588 48-130 (257)
68 3edo_A Flavoprotein, putative 98.9 4.6E-09 1.6E-13 97.4 9.6 127 104-253 3-150 (151)
69 1sqs_A Conserved hypothetical 98.8 6.7E-08 2.3E-12 96.3 16.6 153 104-262 1-179 (242)
70 1rtt_A Conserved hypothetical 98.8 3.4E-08 1.2E-12 94.8 13.7 124 104-234 6-143 (193)
71 3gfs_A FMN-dependent NADPH-azo 98.8 3.9E-08 1.4E-12 92.8 12.7 115 105-234 1-131 (174)
72 1t0i_A YLR011WP; FMN binding p 98.8 6.6E-08 2.3E-12 92.4 14.3 121 105-235 1-150 (191)
73 2gpj_A Siderophore-interacting 98.7 4.7E-09 1.6E-13 105.5 4.0 90 480-587 42-135 (252)
74 2hpv_A FMN-dependent NADH-azor 98.7 3.3E-07 1.1E-11 88.7 16.3 157 104-262 1-203 (208)
75 2q62_A ARSH; alpha/beta, flavo 98.6 1.2E-06 4.1E-11 88.0 17.1 128 101-233 31-169 (247)
76 1rli_A Trp repressor binding p 98.5 1.2E-06 4E-11 82.8 14.2 124 104-235 3-153 (184)
77 2fzv_A Putative arsenical resi 98.5 2.5E-06 8.7E-11 87.0 16.3 127 102-233 56-194 (279)
78 3fvw_A Putative NAD(P)H-depend 98.4 4E-06 1.4E-10 80.7 16.0 126 104-235 2-145 (192)
79 3r6w_A FMN-dependent NADH-azor 98.4 6.6E-06 2.3E-10 80.0 17.0 157 104-262 1-207 (212)
80 3rpe_A MDAB, modulator of drug 98.4 1.3E-05 4.5E-10 78.9 18.5 157 102-264 23-216 (218)
81 3k1y_A Oxidoreductase; structu 98.4 4.2E-06 1.4E-10 80.8 14.3 127 102-235 9-154 (191)
82 4hs4_A Chromate reductase; tri 98.3 1.1E-05 3.9E-10 78.1 16.2 124 104-234 6-144 (199)
83 3lcm_A SMU.1420, putative oxid 98.3 6.4E-06 2.2E-10 79.5 14.0 156 105-264 1-189 (196)
84 2amj_A Modulator of drug activ 98.2 5.2E-05 1.8E-09 73.6 18.1 150 103-256 11-199 (204)
85 3p0r_A Azoreductase; structura 98.2 2.4E-05 8.4E-10 76.3 15.6 157 104-262 4-206 (211)
86 1d4a_A DT-diaphorase, quinone 98.2 3.4E-05 1.2E-09 78.4 16.9 159 104-265 2-216 (273)
87 3f2v_A General stress protein 98.2 2.2E-05 7.7E-10 75.7 14.0 157 104-263 1-181 (192)
88 3tem_A Ribosyldihydronicotinam 98.2 4.4E-05 1.5E-09 75.5 16.0 159 104-265 1-215 (228)
89 3s2y_A Chromate reductase; ura 97.3 4.7E-07 1.6E-11 87.9 0.0 125 104-235 6-145 (199)
90 3u7i_A FMN-dependent NADH-azor 98.0 0.00016 5.6E-09 71.1 17.6 161 103-264 3-214 (223)
91 3u7r_A NADPH-dependent FMN red 97.9 0.0003 1E-08 67.7 17.0 124 104-233 2-138 (190)
92 3svl_A Protein YIEF; E. coli C 97.9 0.00016 5.6E-09 69.5 15.1 155 103-264 3-183 (193)
93 3ha2_A NADPH-quinone reductase 97.9 0.00023 7.8E-09 67.7 14.5 151 105-263 1-167 (177)
94 3l9w_A Glutathione-regulated p 97.5 0.0016 5.5E-08 69.9 16.2 157 104-264 236-408 (413)
95 4gi5_A Quinone reductase; prot 97.3 0.0075 2.6E-07 61.4 17.5 159 104-265 22-243 (280)
96 3lrx_A Putative hydrogenase; a 97.1 0.00028 9.6E-09 65.6 3.4 39 549-588 9-47 (158)
97 3lyu_A Putative hydrogenase; t 96.8 0.00062 2.1E-08 62.1 3.7 39 550-589 5-43 (142)
98 1tvm_A PTS system, galactitol- 67.8 12 0.00041 32.1 6.8 45 103-147 20-64 (113)
99 3lo8_A Ferredoxin--NADP reduct 62.6 13 0.00045 37.2 6.9 51 310-361 23-73 (311)
100 1ccw_A Protein (glutamate muta 60.3 26 0.0009 30.9 7.8 113 108-237 5-120 (137)
101 1mkz_A Molybdenum cofactor bio 58.3 15 0.00051 33.9 5.9 58 195-252 7-64 (172)
102 2l2t_A Receptor tyrosine-prote 52.6 17 0.00059 26.1 4.0 20 60-79 20-39 (44)
103 1e2b_A Enzyme IIB-cellobiose; 51.5 36 0.0012 28.8 6.8 58 104-170 3-60 (106)
104 2jwa_A Receptor tyrosine-prote 48.4 18 0.00061 26.1 3.6 18 62-79 23-40 (44)
105 2ks1_B Epidermal growth factor 48.2 21 0.00073 25.6 4.0 20 60-79 21-40 (44)
106 2l2q_A PTS system, cellobiose- 43.9 30 0.001 29.2 5.1 41 105-146 5-45 (109)
107 3pzy_A MOG; ssgcid, seattle st 41.8 14 0.00049 33.9 2.9 57 196-253 5-63 (164)
108 2pjk_A 178AA long hypothetical 40.2 13 0.00044 34.7 2.3 58 195-252 12-76 (178)
109 1y5e_A Molybdenum cofactor bio 36.7 28 0.00097 31.8 4.1 57 196-252 11-67 (169)
110 3czc_A RMPB; alpha/beta sandwi 34.2 31 0.0011 29.2 3.7 42 104-145 18-60 (110)
111 3iwt_A 178AA long hypothetical 31.7 27 0.00093 32.0 3.1 57 196-252 13-76 (178)
112 3ju3_A Probable 2-oxoacid ferr 29.9 47 0.0016 28.4 4.1 58 103-166 13-71 (118)
113 4e5v_A Putative THUA-like prot 29.4 2.6E+02 0.0088 27.6 10.1 82 104-188 4-85 (281)
114 3kbq_A Protein TA0487; structu 27.5 32 0.0011 31.9 2.8 57 198-254 3-61 (172)
115 1t0b_A THUA-like protein; treh 26.6 2.1E+02 0.007 27.8 8.6 62 122-188 34-96 (252)
116 2xpn_B SPT6, chromatin structu 26.0 28 0.00097 21.7 1.3 12 198-209 3-14 (26)
117 1di6_A MOGA, molybdenum cofact 25.9 38 0.0013 32.0 3.0 55 198-252 3-61 (195)
118 3td9_A Branched chain amino ac 24.9 2.9E+02 0.0099 27.1 9.7 79 103-189 148-227 (366)
119 1iow_A DD-ligase, DDLB, D-ALA\ 23.9 3.5E+02 0.012 25.8 10.0 42 104-147 2-46 (306)
120 1vkr_A Mannitol-specific PTS s 23.4 1E+02 0.0035 26.8 5.1 45 103-147 12-57 (125)
121 3no5_A Uncharacterized protein 22.5 1.1E+02 0.0037 30.5 5.7 89 117-211 122-212 (275)
122 3rht_A (gatase1)-like protein; 22.1 3E+02 0.01 26.9 8.8 75 104-188 4-78 (259)
123 2k1k_A Ephrin type-A receptor 21.9 78 0.0027 21.9 3.1 8 69-76 30-37 (38)
124 1jlj_A Gephyrin; globular alph 21.3 45 0.0015 31.2 2.5 57 196-252 12-73 (189)
125 3rfq_A Pterin-4-alpha-carbinol 20.9 33 0.0011 32.2 1.4 57 195-252 27-85 (185)
No 1
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=100.00 E-value=4.2e-93 Score=805.79 Aligned_cols=469 Identities=38% Similarity=0.700 Sum_probs=403.1
Q ss_pred ccccCCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhc--cCCeEEEEEecCCCCCcc
Q 007567 99 EVDDGKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLK--KENIVFFFLATYGDGEPT 176 (598)
Q Consensus 99 ~~~~~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~--~~~~vIf~~sTyG~Gepp 176 (598)
++...+++|+|+|||||||||.+|++|++++.+.+ ..++++|+++++.++ ...+. +++++||++||||+|++|
T Consensus 13 ~~~~~~~~i~I~YgS~tGnte~~A~~la~~l~~~g--~~~~v~~~~~~~~~~---l~~~~~~~~~~vi~~~sT~G~G~~p 87 (618)
T 3qe2_A 13 KMKKTGRNIIVFYGSQTGTAEEFANRLSKDAHRYG--MRGMSADPEEYDLAD---LSSLPEIDNALVVFCMATYGEGDPT 87 (618)
T ss_dssp HHHHHTCSEEEEEECSSSHHHHHHHHHHHHGGGGT--CCEEEECGGGSCGGG---GGGGGGSTTCEEEEEEECBGGGBCC
T ss_pred HHHhcCCeEEEEEECChhHHHHHHHHHHHHHHhCC--CceEEechHHcCHHH---hhhcccccCcEEEEEcCccCCCCCC
Confidence 33445678999999999999999999999998776 457889999998654 12222 478999999999999999
Q ss_pred hHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHHHHH
Q 007567 177 DNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELV 256 (598)
Q Consensus 177 dna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l 256 (598)
+||+.|++||.+.. ..|+|++||||||||++|+|||+++|.++++|+++||++++|+|+||++.+++++|+.|++.+
T Consensus 88 d~~~~F~~~L~~~~---~~l~~~~~avfGlGd~~Y~~f~~~~k~~d~~L~~lGa~~~~~~g~~D~~~~~~~~~~~W~~~l 164 (618)
T 3qe2_A 88 DNAQDFYDWLQETD---VDLSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFELGLGDDDGNLEEDFITWREQF 164 (618)
T ss_dssp GGGHHHHHHHHHCC---CCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEESSCCEEEETTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcc---ccccCCEEEEEeCCCCCcHhHhHHHHHHHHHHHhCCCCEeecccccccCCCcHHHHHHHHHHH
Confidence 99999999998642 469999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhCCCCCCCCCCCCccccccceEEEEecCCCcc---ccc--cccCCCCCCcccCCCCCeeeEEeeeecccCCCC
Q 007567 257 WPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDNADAS---VGE--KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSS 331 (598)
Q Consensus 257 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~--~~~~~~~~~~~~d~~~p~~a~v~~~~eL~~~~s 331 (598)
|++|++.++.+... .....+.|++......... ..+ ...+..+...+|+.++|+.|+|+.|++|+. ++
T Consensus 165 ~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~~n~~Lt~-~~ 237 (618)
T 3qe2_A 165 WLAVCEHFGVEATG------EESSIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GT 237 (618)
T ss_dssp HHHHHHHHTCCCC---------CCCCSEEEEECTTCCGGGSBCSCCSSTTTTTSCCSCCSSSSCEEEEEEEEEECSC-CS
T ss_pred HHHHHHHhCCCccc------ccccccceeEEecccccccccccccccccccccccCCCcccCCcEEEEEEeEEEcCC-CC
Confidence 99999987633211 0112356777665322110 000 001112345678889999999999999985 57
Q ss_pred CCceeEEEEeecCCCCccCCCCeeEEecCCCHHHHHHHHHHcCCCCCcEEEEecCCCCCCCCCCCCCCCCCC-cccHHHH
Q 007567 332 DRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP-PCSLRTA 410 (598)
Q Consensus 332 ~rs~~hie~di~~~~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl~~d~~~~i~~~~~~~~~~~~~~~~~pfp-p~Tl~~~ 410 (598)
+|+|+|||||+++++++|+|||||+|||.|+++.|++++++||+++|+.++++...+. .+.+.||| |||++++
T Consensus 238 ~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~l~~d~~v~~~~~~~~------~~~~~~~p~~~tl~~~ 311 (618)
T 3qe2_A 238 ERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SNKKHPFPCPTSYRTA 311 (618)
T ss_dssp SSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCTTCEEEEEESCTT------CSCCSSSSSSEEHHHH
T ss_pred CCcEEEEEEEcCCCCcccccCCEEEEEcCCCHHHHHHHHHHhCcCCCceEEEecCCcc------ccCCCCCCCceEHHHh
Confidence 8999999999999999999999999999999999999999999999999999865431 23567899 9999999
Q ss_pred HHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhc--CccCHHHHHHHHHHcCCCHHHHHhhCCCCCCChhhhHhhhcC
Q 007567 411 LTKYADLLSSPKKSALLALAAHASDPTEADRLRHLA--SPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVP 488 (598)
Q Consensus 411 L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~La--s~~gk~~y~~~i~~~~~sl~dvL~~fps~~~pl~~ll~~i~p 488 (598)
|++|+||+++|+|++|+.||+||+|++||++|+.|+ +++|+++|.+|+.+++++++|||++||++++|+++|++ ++|
T Consensus 312 l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~i~dvL~~fps~~~p~~~l~~-~lp 390 (618)
T 3qe2_A 312 LTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCE-LLP 390 (618)
T ss_dssp HHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHHHHHTTTTTCCHHHHHHHSTTBCCCHHHHHH-HSC
T ss_pred hhhEeecCCCCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHHHHHHhhcCCCHHHHHHhCCccCCCHHHHHH-hcc
Confidence 999999999999999999999999999999999999 78899999999999999999999999999999999997 569
Q ss_pred CCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCCceEEEEEeCCCccCCCCCCCcEE
Q 007567 489 RLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPII 568 (598)
Q Consensus 489 ~l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~~~i~v~~s~F~lp~~~~~PiI 568 (598)
+++||+|||||||..+++++||||++|.++++.|+.+.|+||+||+++.+.++......++|+++.|+|+||.++.+|||
T Consensus 391 ~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~Gd~~~~~~v~v~~p~g~F~lp~~~~~pii 470 (618)
T 3qe2_A 391 RLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVI 470 (618)
T ss_dssp BCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC-----CCEEEEEEECCSCCCCSSTTSCEE
T ss_pred ccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhcccCCCCcceEEEEEEecCcccCCCCCCCCeE
Confidence 99999999999999888999999999999999999999999999999887322111237899999999999998899999
Q ss_pred EEeCCCChHhHHHHHHHHhhc
Q 007567 569 MIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 569 mIg~GTGiAPfr~flqer~~~ 589 (598)
|||+||||||||||||+|.+.
T Consensus 471 mIg~GtGIAPfrs~l~~r~~~ 491 (618)
T 3qe2_A 471 MVGPGTGVAPFIGFIQERAWL 491 (618)
T ss_dssp EECCGGGGHHHHHHHHHHHHH
T ss_pred EEcCCcchhhHHHHHHHHHHH
Confidence 999999999999999999864
No 2
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=100.00 E-value=6.5e-88 Score=771.11 Aligned_cols=464 Identities=31% Similarity=0.540 Sum_probs=396.0
Q ss_pred cccccCCceEEEEEeCCCchHHHHHHHHHHHHH-hhcCCceeEEEcCCCCCCcchHHHHhhccC-CeEEEEEecCCCCCc
Q 007567 98 VEVDDGKQKVTIFFGTQTGTAEGFAKALADEAR-ARYDKAIFKVVDIDDYADEEDEYEEKLKKE-NIVFFFLATYGDGEP 175 (598)
Q Consensus 98 ~~~~~~~~~v~I~YgSqTGtae~~A~~la~~l~-~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~-~~vIf~~sTyG~Gep 175 (598)
.++...+++++|+|||||||||++|++|++++. +.+ ..+.++++++++.+ ++..+ +.+||++||||+|++
T Consensus 43 ~~~~~~~~ki~IlY~S~tGnte~~A~~ia~~l~~~~g--~~v~v~~l~~~~~~------~l~~~~~~vi~~~sT~G~G~~ 114 (682)
T 2bpo_A 43 QVVTENNKNYLVLYASQTGTAEGFAKAFSKELVAKFN--LNVMCADVENYDFE------SLNDVPVIVSIFISTYGEGDF 114 (682)
T ss_dssp HHHHHTTCSEEEEEECSSSHHHHHHHHHHHHHHHHHC--CCEEEEETTSSCGG------GGGGCCSEEEEEEECBTTTBC
T ss_pred HHHhcCCCeEEEEEECCchHHHHHHHHHHHHhHHhcC--CceEEeehHHCCHH------HHhhcCCeEEEEeCccCCCCC
Confidence 344556789999999999999999999999998 655 45789999999864 46778 999999999999999
Q ss_pred chHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccCCC-CchHHHHHHHH
Q 007567 176 TDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQ-CIEDDFSAWRE 254 (598)
Q Consensus 176 pdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~-~~e~~f~~W~~ 254 (598)
|+|+..|++||.... ...|++++||||||||++|+|||.++|.++++|+++||+++.+++++|++. +.+++|.+|.+
T Consensus 115 p~~~~~F~~~l~~~~--~~~L~~~~~avfGlGds~Y~~f~~a~k~l~~~L~~lGa~~l~~~~~~D~~~~~~~~~~~~W~~ 192 (682)
T 2bpo_A 115 PDGAVNFEDFICNAE--AGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLGKLGEADDGAGTTDEDYMAWKD 192 (682)
T ss_dssp CSSCHHHHHHHHTCC--TTSSTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEEEETTTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcc--chhccCCEEEEEecCCCCchhHhHHHHHHHHHHHHCCCeEeECcEEEecCCcccHHHHHHHHH
Confidence 999999999998642 245999999999999999999999999999999999999999999999874 78999999999
Q ss_pred HHHHHHHhhhCCCCCCCCCCCCccccccceEEEEecC--CCccccccc---cC--------CCCCCcccCCCCCeeeEEe
Q 007567 255 LVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDN--ADASVGEKS---WG--------NANGHAVYDAQHPCRSNVA 321 (598)
Q Consensus 255 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~---~~--------~~~~~~~~d~~~p~~a~v~ 321 (598)
.||++|++.+..+... . ...+.|++...+. ......+.. .. ..+...+|+.++||.|+|+
T Consensus 193 ~l~~~l~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~v~ 265 (682)
T 2bpo_A 193 SILEVLKDELHLDEQE-A------KFTSQFQYTVLNEITDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQPYIAPIV 265 (682)
T ss_dssp HHHHHHHHHTTCCCCC-C------CCCCSBCCEECSSCCTTSCSSCSSGGGSTTSCCCCCTTCCBCSCCBTTBCCCEEEE
T ss_pred HHHHHHHhhcCCcccc-c------ccCCcceeEecccCCccccccCccccccccccccccccccccCcccCCCceEEEEE
Confidence 9999999887533211 0 1123444443321 000000000 00 0112456788899999999
Q ss_pred eeecccCCCCCCceeEEEEeecCCCCccCCCCeeEEecCCCHHHHHHHHHHcCCCCCcEEEEecCCCCCCCCCCCCCCCC
Q 007567 322 VRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPT 401 (598)
Q Consensus 322 ~~~eL~~~~s~rs~~hie~di~~~~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl~~d~~~~i~~~~~~~~~~~~~~~~~p 401 (598)
.+++|+. +++|+|+|||||+++++++|+|||||+|||.|+++.|++++++||+++|+.|+++..++ ..+.|
T Consensus 266 ~~~~L~~-~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~l~~d~~v~~~~~~~--------~~~~p 336 (682)
T 2bpo_A 266 KSRELFS-SNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPLDP--------TVKVP 336 (682)
T ss_dssp EEEECCC-CSSCCEEEEEEECTTBTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEEECCBSST--------TCCCS
T ss_pred EEEEccC-CCCCCEEEEEEEcCCCCceecCCCEEEEEcCCCHHHHHHHHHHhhccCCcEEEEecCCc--------ccCCC
Confidence 9999998 78999999999999899999999999999999999999999999999999999875432 24678
Q ss_pred CC-cccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCccCHHHHHHHHHHcCCCHHHHHhhCC----CCC
Q 007567 402 FP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFP----SAK 476 (598)
Q Consensus 402 fp-p~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~~gk~~y~~~i~~~~~sl~dvL~~fp----s~~ 476 (598)
|| |||++++|++|+||+++|+|++|+.||+||+|++||++|++|+ +|+++|.+|+..+++|++|||++|| +++
T Consensus 337 ~p~~~tl~~~l~~~ldi~~~p~~~~l~~la~~a~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~i~dvL~~fp~~~~s~~ 414 (682)
T 2bpo_A 337 FPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAVEITSKYFNIADALKYLSDGAKWDT 414 (682)
T ss_dssp SCSSEEHHHHHHHTBCCSSCCCHHHHHHHSTTCSSHHHHHHHHHHT--TCHHHHHHHTGGGTCCHHHHHHHHHTTCCCTT
T ss_pred CCCCccHHHHHHHhhhccCCCCHHHHHHHHHHCCCHHHHHHHHHhc--cCHHHHHHHHhcCCCCHHHHHHhccCcccccC
Confidence 99 9999999999999999999999999999999999999999999 7999999999999999999999999 899
Q ss_pred CChhhhHhhhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCC---CCcccCcchHHhhccCCCC------------C
Q 007567 477 PPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPT---GRVHKGLCSTWMKNSLPME------------K 541 (598)
Q Consensus 477 ~pl~~ll~~i~p~l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~---g~~~~G~~S~~L~~~~~~~------------~ 541 (598)
+|+++|++ ++|+++||+|||||||...+++|+|||+++.++++. ++.+.|+||+||.++.+++ .
T Consensus 415 ~p~~~l~~-~lp~l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~g~~~~~~~~~~~G~~ 493 (682)
T 2bpo_A 415 VPMQFLVE-SVPQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVH 493 (682)
T ss_dssp SCHHHHHH-HSCBCCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHHHHTTCCTTTSCCCCC
T ss_pred CCHHHHHH-hCcccccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhcccccccccccccccccc
Confidence 99999996 569999999999999998889999999999888776 6888999999999876521 0
Q ss_pred CC--------CCceEEEEEeCCCccCCCCCCCcEEEEeCCCChHhHHHHHHHHhhcc
Q 007567 542 SN--------DCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 542 ~~--------~~~~~~i~v~~s~F~lp~~~~~PiImIg~GTGiAPfr~flqer~~~~ 590 (598)
.. .+..+++++++++|+||.++.+||||||+||||||||||||+|.+.+
T Consensus 494 v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~ 550 (682)
T 2bpo_A 494 YDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFL 550 (682)
T ss_dssp CCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHH
T ss_pred eeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhh
Confidence 00 12479999999999999988899999999999999999999998754
No 3
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=100.00 E-value=8.9e-86 Score=753.68 Aligned_cols=463 Identities=30% Similarity=0.553 Sum_probs=386.0
Q ss_pred ccCCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHH
Q 007567 101 DDGKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAA 180 (598)
Q Consensus 101 ~~~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~ 180 (598)
...+++++|+|||||||||.+|++|++.+. .+ ..+++++|++|+.+ +|..++++||++||||+|+||+|++
T Consensus 8 ~~~~~k~~IlY~S~TG~te~~A~~l~~~l~-~~--~~~~v~~m~~~d~~------~l~~~~~vl~vtsT~G~Gdpp~n~~ 78 (688)
T 1tll_A 8 MAKRVKATILYATETGKSQAYAKTLCEIFK-HA--FDAKAMSMEEYDIV------HLEHEALVLVVTSTFGNGDPPENGE 78 (688)
T ss_dssp -CCSCEEEEEEECSSSHHHHHHHHHHHHHT-TT--SEEEEEETTTSCTT------SGGGCSEEEEEECCBTTTBCCGGGH
T ss_pred hcCCCeEEEEEECCchHHHHHHHHHHHHHh-cC--CCcEEeecccCChh------HhccCceEEEEEcccCCCcCCHHHH
Confidence 445678999999999999999999999985 33 56889999999864 4778899999999999999999999
Q ss_pred HHHHHHHhhcC---------------------------------------CCcccCCceEEEEeecCCcchhHhHHHHHH
Q 007567 181 RFYKWFTEQKE---------------------------------------GGEWLQKLKYGVFGLGNRQYEHFNKIAKVV 221 (598)
Q Consensus 181 ~F~~~L~~~~~---------------------------------------~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~l 221 (598)
.|++||.+... ....|+|++||||||||++|+|||+++|.+
T Consensus 79 ~F~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~L~~~~~aVfGlGds~Y~~F~~~~k~l 158 (688)
T 1tll_A 79 KFGCALMEMRHPNSVQEERKSYKVRFNSVSSYSDSRKSSGDGPDLRDNFESTGPLANVRFSVFGLGSRAYPHFCAFGHAV 158 (688)
T ss_dssp HHHHHHHHHTC-----CCCCCHHHHTSCCC----------------------CTTTTCEEEEEEEECTTSSSTTHHHHHH
T ss_pred HHHHHHHhccCCccccccccccccccccccccccccccccccccccccccccccCCCCeEEEEeeccCchHHHHHHHHHH
Confidence 99999987520 023589999999999999999999999999
Q ss_pred HHHHHhcCCeEeecceeccCCCCchHHHHHHHHHHHHHHHhhhCCCCCCCCC---C---CCcc-ccccceEEEEecCCCc
Q 007567 222 DEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTV---S---TPYT-AAISEYRVVFYDNADA 294 (598)
Q Consensus 222 d~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~~~~~~~~~~---~---~~~~-~~~~~~~v~~~~~~~~ 294 (598)
|++|+++||+||+++++||+..+.+++|.+|.+.+|++|++.+..+...... . .... ...+.|++........
T Consensus 159 d~~L~~lGa~rl~~~~~~D~~~g~e~~f~~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (688)
T 1tll_A 159 DTLLEELGGERILKMREGDELCGQEEAFRTWAKKVFKAACDVFCVGDDVNIEKPNNSLISNDRSWKRNKFRLTYVAEAPD 238 (688)
T ss_dssp HHHHHHTTCEESSCCEEEETTTTHHHHHHHHHHHHHHHHHHHHTCCSSSCCC-------CCSSSCCTTTEEEEECSCCCC
T ss_pred HHHHHHcCCceeecceeeccCCCcHHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcceEEeccccccc
Confidence 9999999999999999999988899999999999999999876432111000 0 0000 0123456554321100
Q ss_pred cccccccCCCCCCcccCCCCCeeeEEeeeecccCCCCCCceeEEEEeecCC-CCccCCCCeeEEecCCCHHHHHHHHHHc
Q 007567 295 SVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGT-GLTYETGDHVGVYCENLSETVEEALSLL 373 (598)
Q Consensus 295 ~~~~~~~~~~~~~~~~d~~~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~-~l~Y~~GD~l~V~P~N~~~~Ve~~l~~L 373 (598)
. . .....+..++|+.|+|+.|++|+.++++|+|+|||||++++ +++|+|||||+|||.|+++.|++++++|
T Consensus 239 ~--~------~~~~~~~~~~~~~a~v~~~~~Lt~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l 310 (688)
T 1tll_A 239 L--T------QGLSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERL 310 (688)
T ss_dssp H--H------HHHHHHTTSCCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTC
T ss_pred c--c------ccccccccCCceEEEEEeeeecCCCCCCceEEEEEEecCCCCCCccCCCCEEEEecCCCHHHHHHHHHHh
Confidence 0 0 00112456789999999999999999999999999999875 7999999999999999999999999999
Q ss_pred CC--CCCcEEEEecCCCCCCCCCC---CCCCCCCCcccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCc
Q 007567 374 GL--SPDTYFSLHTDKEDGTPLGK---STLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASP 448 (598)
Q Consensus 374 gl--~~d~~~~i~~~~~~~~~~~~---~~~~~pfpp~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~ 448 (598)
|+ ++|+.++++..++...|.+. ...+.||||||++++|++|+||+++|+|++|+.||+||+|++||++|++|++
T Consensus 311 ~~~~~~d~~v~~~~~~~~~~p~~~~~~~~~~~~~p~~tl~~~l~~~lDi~~~p~~~~l~~la~~a~~~~ek~~L~~l~~- 389 (688)
T 1tll_A 311 EDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSK- 389 (688)
T ss_dssp SSCCCSCSCEEEEEEEECCCSSSCCEEEEECCSSCSBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHHHHHHHHHTT-
T ss_pred CCCCCCCeEEEEeccccccCCCcccccccccCCCCCccHHHHHHhheeCCCCCCHHHHHHHHHHcCCHHHHHHHHHHhc-
Confidence 86 68899988753221222110 1234578899999999999999999999999999999999999999999996
Q ss_pred cCHHHHHHHHHHcCCCHHHHHhhCCCCCCChhhhHhhhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCC--CCccc
Q 007567 449 AGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPT--GRVHK 526 (598)
Q Consensus 449 ~gk~~y~~~i~~~~~sl~dvL~~fps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~--g~~~~ 526 (598)
+++.|.+|+...+++++|||.+||++++|+++++.. +|+++||+|||||+|..+++.++|+|++|.++++. |+.+.
T Consensus 390 -~~~~~~~~~~~~~~~i~evl~~fps~~~p~~~l~~~-lp~l~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~ 467 (688)
T 1tll_A 390 -GLQEYEEWKWGKNPTMVEVLEEFPSIQMPATLLLTQ-LSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHH 467 (688)
T ss_dssp -CSHHHHHHHHHHCCCHHHHHHHSTTBCCCHHHHHHH-SCBCCCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEE
T ss_pred -CHHHHHHHHhhcCCCHHHHHHhCCCcCCCHHHHHHh-CcccceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCC
Confidence 789999999999999999999999999999999974 59999999999999987789999999999887654 46789
Q ss_pred CcchHHhhccCCCCCCCCCceEEEEEeCC-CccCCCCCCCcEEEEeCCCChHhHHHHHHHHhhc
Q 007567 527 GLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 527 G~~S~~L~~~~~~~~~~~~~~~~i~v~~s-~F~lp~~~~~PiImIg~GTGiAPfr~flqer~~~ 589 (598)
|+||+||+++.++ +.++|+++++ .|+||.++.+||||||+||||||||||||+|.+.
T Consensus 468 G~~S~~L~~l~~G------d~v~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~ 525 (688)
T 1tll_A 468 GVCSSWLNRIQAD------DVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFD 525 (688)
T ss_dssp CHHHHHHTTCCTT------SEEEEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHH
T ss_pred CchhHHHHhCCCC------CEEEEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHh
Confidence 9999999987665 4688999765 8999988889999999999999999999999864
No 4
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=100.00 E-value=7.8e-63 Score=538.62 Aligned_cols=305 Identities=38% Similarity=0.686 Sum_probs=268.1
Q ss_pred ccccccceEEEEecCCCcc---cccc--ccCCCCCCcccCCCCCeeeEEeeeecccCCCCCCceeEEEEeecCCCCccCC
Q 007567 277 YTAAISEYRVVFYDNADAS---VGEK--SWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYET 351 (598)
Q Consensus 277 ~~~~~~~~~v~~~~~~~~~---~~~~--~~~~~~~~~~~d~~~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~~l~Y~~ 351 (598)
....+++|+++.+++.+.. ..+. .....++..+|+.++||.|+|++|++|+. +++|+|+||||||++++++|+|
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~ge~~~~~~~~~~~~~~~~~~p~~a~v~~n~~Lt~-~~~r~~~hie~dl~~s~l~Y~~ 97 (458)
T 3qfs_A 19 SHMSIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYES 97 (458)
T ss_dssp -----CCEEEEECTTCCGGGCBSSCSSSTTTTTSCCSCCCSSSCEEEEEEEEEECCS-SSSSCEEEEEEECTTSCCCCCT
T ss_pred cccceeceEEEEccCccccccccCChhhcccccccCCCCCCCCCEEEEEEEEEEcCC-CCCCCEEEEEEEeCCCCcccCC
Confidence 3456789999998765432 1121 12345677889999999999999999987 5789999999999999999999
Q ss_pred CCeeEEecCCCHHHHHHHHHHcCCCCCcEEEEecCCCCCCCCCCCCCCCCCC-cccHHHHHHhccccCCCccHHHHHHHH
Q 007567 352 GDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALA 430 (598)
Q Consensus 352 GD~l~V~P~N~~~~Ve~~l~~Lgl~~d~~~~i~~~~~~~~~~~~~~~~~pfp-p~Tl~~~L~~y~DL~~~p~k~~l~~La 430 (598)
||||+|||.|+++.|++++++||+++|+.++++..++. .+.+.||| |||++++|++|+||+++|+|++|+.||
T Consensus 98 GD~l~V~p~N~~~~V~~~l~~l~~~~d~~v~~~~~~~~------~~~~~p~~~~~tl~~~l~~~~di~~~p~~~~l~~la 171 (458)
T 3qfs_A 98 GDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELA 171 (458)
T ss_dssp TCEEEECCCCCHHHHHHHHHHHTCCTTCEEEEEESSTT------CSCCCSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHG
T ss_pred CCEEEEEeeCCHHHHHHHHHHhCcCCCceEEecCCCcc------cccCCCCCCCeeHHHHHHhcEeccCCCCHHHHHHHH
Confidence 99999999999999999999999999999999864431 23567999 999999999999999999999999999
Q ss_pred HhCCChhHHHHHHHhcC--ccCHHHHHHHHHHcCCCHHHHHhhCCCCCCChhhhHhhhcCCCCCcccccCCCCCCCCCeE
Q 007567 431 AHASDPTEADRLRHLAS--PAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRI 508 (598)
Q Consensus 431 ~~a~d~~ek~~L~~Las--~~gk~~y~~~i~~~~~sl~dvL~~fps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~~~~~i 508 (598)
+||+|++||++|++|++ ++|+++|.+|+.++++|++|||++||++++|++.|++ ++|+++||+|||||||..+++++
T Consensus 172 ~~a~~~~ek~~L~~l~~~~~~~~~~~~~~~~~~~~~ildvL~~fps~~~p~~~ll~-~lp~l~pR~YSIsSsp~~~~~~i 250 (458)
T 3qfs_A 172 QYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCE-LLPRLQARYYSIASSSKVHPNSV 250 (458)
T ss_dssp GGBCSHHHHHHHHHHHSCSHHHHHHHHHHTTTTTCCHHHHHHHSTTBCCCHHHHHH-HSCBCCCEEEECCSCTTTCTTEE
T ss_pred HHcCCHHHHHHHHHHhccCcccHHHHHHHHhhcCCCHHHHHHhCCccCCCHHHHHh-hCCCCcceeEeeccCcccCCCEE
Confidence 99999999999999987 5789999999999999999999999999999999997 56999999999999999888999
Q ss_pred EEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCCceEEEEEeCCCccCCCCCCCcEEEEeCCCChHhHHHHHHHHhh
Q 007567 509 HVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGSWSRTGT 588 (598)
Q Consensus 509 ~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~~~i~v~~s~F~lp~~~~~PiImIg~GTGiAPfr~flqer~~ 588 (598)
+|||++|++++..|+.+.|+||+||+++.++++......++|+++.|.|+||.++.+||||||+||||||||||||+|.+
T Consensus 251 ~ltV~vv~~~~~~~r~~~G~~S~~L~~l~~gg~~~~~~~v~v~~p~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~ 330 (458)
T 3qfs_A 251 HICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAW 330 (458)
T ss_dssp EEEEECCEEECTTSCEEECHHHHHHHTCCSSCSSCCCCEEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHH
T ss_pred EEEEEEEEecCCCCCCCCCchhHHHHhhccCCccCCceEEEEEecCCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHH
Confidence 99999999999899999999999999998876432233689999999999999888999999999999999999999875
Q ss_pred c
Q 007567 589 L 589 (598)
Q Consensus 589 ~ 589 (598)
+
T Consensus 331 l 331 (458)
T 3qfs_A 331 L 331 (458)
T ss_dssp H
T ss_pred H
Confidence 4
No 5
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=100.00 E-value=6.7e-58 Score=509.47 Aligned_cols=283 Identities=31% Similarity=0.537 Sum_probs=242.3
Q ss_pred CCCcccCCCCCeeeEEeeeecccCCCCCCceeEEEEeecCCCCccCCCCeeEEecCCCHHHHHHHHHHcCCCC--CcEEE
Q 007567 305 NGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSP--DTYFS 382 (598)
Q Consensus 305 ~~~~~~d~~~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl~~--d~~~~ 382 (598)
....+|+..+||.|+|+.|++|+.++++|+|+||+||+++++++|+|||||+|||.|+++.|++++++||+++ +..|.
T Consensus 104 ~~~~~~~~~~~~~a~v~~~~~Lt~~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N~~~~V~~~l~~lgl~~~~~~~v~ 183 (539)
T 2qtl_A 104 SQVSVTSADPVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHCVL 183 (539)
T ss_dssp ---------CCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECCCCHHHHHHHHHHTTCGGGTTSEEE
T ss_pred cccCCCCCCCCEEEEEEeeEEcCCCCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCCCHHHHHHHHHHhCCCccCCeEEE
Confidence 3467899999999999999999998999999999999999999999999999999999999999999999985 56788
Q ss_pred EecCCCCCCCCCCCCCCCCCC-cccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCccCHHHHHHHHHHc
Q 007567 383 LHTDKEDGTPLGKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVAS 461 (598)
Q Consensus 383 i~~~~~~~~~~~~~~~~~pfp-p~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~~gk~~y~~~i~~~ 461 (598)
++..++... .+..+++||| |||++++|++|+||+++|+|++|+.||+||+|++||++|++|++++|+++|.+|+..+
T Consensus 184 ~~~~~~~~~--~~~~~p~~~p~~~tl~~~L~~~lDi~~~p~~~~l~~la~~a~d~~ek~~L~~l~s~~~~~~~~~~~~~~ 261 (539)
T 2qtl_A 184 LKIKADTKK--KGATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDA 261 (539)
T ss_dssp EEECTTCCC--TTCCCCTTSCTTCBHHHHHHHTBCTTSCCCHHHHHHHHTTBCSHHHHHHHHHHHSSTTHHHHHHHTTTT
T ss_pred EeccccccC--CCccCCCCCCCcccHHHHHHHHhhhcCCCCHHHHHHHHHHcCCHHHHHHHHHHhChhhHHHHHHHHhhc
Confidence 775443211 1235678999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCChhhhHhhhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeC--CCCCcccCcchHHhhccC--
Q 007567 462 QRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKT--PTGRVHKGLCSTWMKNSL-- 537 (598)
Q Consensus 462 ~~sl~dvL~~fps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~~~~~i~itv~~v~~~~--~~g~~~~G~~S~~L~~~~-- 537 (598)
++|++|||++||++++|+++|++ ++|+++||+|||||+|..+++.|+|+|++|.+.+ ..|+.+.|+||+||+++.
T Consensus 262 ~~~lldvL~~fps~~~p~~~ll~-~lp~l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~ 340 (539)
T 2qtl_A 262 CACLLDLLLAFPSCQPPLSLLLE-HLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVAS 340 (539)
T ss_dssp TCCHHHHHHHSTTBCCCHHHHHH-HSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTT
T ss_pred CCCHHHHHHhCCCcCCCHHHHHH-hCcCCcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhh
Confidence 99999999999999999999996 5699999999999999877899999999998754 446778999999999983
Q ss_pred ---------CCCC-CCCCceEEEEEeCC-CccCCCCCCCcEEEEeCCCChHhHHHHHHHHhhcc
Q 007567 538 ---------PMEK-SNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 538 ---------~~~~-~~~~~~~~i~v~~s-~F~lp~~~~~PiImIg~GTGiAPfr~flqer~~~~ 590 (598)
+++. ...+..++|+++.+ .|+||.++.+||||||+||||||||||||+|.++.
T Consensus 341 ~~~~~~~~~~Gd~~~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~ 404 (539)
T 2qtl_A 341 VLQPNIHASHEDSGKALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQ 404 (539)
T ss_dssp TC--------------CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHH
T ss_pred hccccccCCCCCccccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHH
Confidence 3320 01122789999875 99999988899999999999999999999997653
No 6
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=100.00 E-value=7.2e-55 Score=468.63 Aligned_cols=258 Identities=31% Similarity=0.538 Sum_probs=227.7
Q ss_pred CCeeeEEeeeecccCCCCCCceeEEEEeecCCCCccCCCCeeEEecCCCHHHHHHHHHHcCCCCCcEEEEecCCCCCCCC
Q 007567 314 HPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPL 393 (598)
Q Consensus 314 ~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl~~d~~~~i~~~~~~~~~~ 393 (598)
.++.|+|+.|++|+.++++|+|+|||||++ ++++|+|||||+|||.|+++.|++++++||+++++.++++....
T Consensus 5 ~~~~a~v~~n~~Lt~~~~~~~~~hie~~l~-~~~~Y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~----- 78 (393)
T 4dql_A 5 GAFSTNVVASKELQQPGSARSTRHLEIELP-KEASYQEGDHLGVIPRNYEGIVNRVTARFGLDASQQIRLEAEEE----- 78 (393)
T ss_dssp CCEEEEEEEEEECSCTTCSCCEEEEEEECC-TTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEECCCC--------
T ss_pred CcEEEEEEeEEEcCCCCCCceEEEEEEECC-CCCccCCCCEEEEEccCCHHHHHHHHHHhCcCCCCeEEEeCCCC-----
Confidence 578899999999999999999999999997 58999999999999999999999999999999999887753211
Q ss_pred CCCCCCCCCC-cccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCccCHHHHHHHHHHcCCCHHHHHhhC
Q 007567 394 GKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEF 472 (598)
Q Consensus 394 ~~~~~~~pfp-p~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~~gk~~y~~~i~~~~~sl~dvL~~f 472 (598)
.....||| |||++++|++ +||+++|+|++|+.||+||+|+++|++|++|++. +.|.+|+..+++|++|+|++|
T Consensus 79 --~~~~~p~~~~~tl~~~l~~-~di~~~~~~~~l~~la~~~~~~~~~~~L~~l~~~---~~~~~~~~~~~~~~ldvL~~f 152 (393)
T 4dql_A 79 --KLAHLPLAKTVSVEELLQY-VELQDPVTRTQLRAMAAKTVCPPHKVELEALLEK---QAYKEQVLAKRLTMLELLEKY 152 (393)
T ss_dssp ----------CCEEHHHHTTS-BCSSSBCCHHHHHHHHHTCCSHHHHHHHHHTTSH---HHHHHHTTTTTCBHHHHHHHC
T ss_pred --ccccCCCCCcEEHHHHHHh-ccccCCCCHHHHHHHHHhCCCHHHHHHHHHHhCc---hHHHHHHhccCCCHHHHHHhC
Confidence 12355888 9999999999 9999999999999999999999999999999874 379999999999999999999
Q ss_pred CCCCCChhhhHhhhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCC-cccCcchHHhhccCCCCCCCCCceEEEE
Q 007567 473 PSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR-VHKGLCSTWMKNSLPMEKSNDCSWAPIF 551 (598)
Q Consensus 473 ps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~-~~~G~~S~~L~~~~~~~~~~~~~~~~i~ 551 (598)
|++++|+++|++ ++|+++||+|||||||..++++++|+|++|.+++..|+ .+.|+||+||+++.++ +.++++
T Consensus 153 ps~~~p~~~~l~-~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l~~G------d~v~v~ 225 (393)
T 4dql_A 153 PACEMKFSEFIA-LLPSIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAELQEG------DTITCF 225 (393)
T ss_dssp TTCCCCHHHHHH-TSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHCCTT------CEEEEE
T ss_pred CCCCCCHHHHHH-hCCCCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhCCCc------CEEEEE
Confidence 999999999997 56999999999999999888999999999988877765 5779999999998765 367877
Q ss_pred Ee--CCCccCCCCCCCcEEEEeCCCChHhHHHHHHHHhhcc
Q 007567 552 VR--QSNFKLPADAKVPIIMIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 552 v~--~s~F~lp~~~~~PiImIg~GTGiAPfr~flqer~~~~ 590 (598)
|+ .+.|+||.++.+||||||+||||||||||||+|.++.
T Consensus 226 v~~P~g~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~ 266 (393)
T 4dql_A 226 ISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLK 266 (393)
T ss_dssp EECCSSCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHH
T ss_pred EEcCCCCcccCccCCCCeEEEccCceechHHHHHHHHHHHH
Confidence 76 4899999988899999999999999999999987653
No 7
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=100.00 E-value=1.7e-54 Score=471.69 Aligned_cols=272 Identities=33% Similarity=0.618 Sum_probs=240.5
Q ss_pred ccCCCCCeeeEEeeeecccCCCCCCceeEEEEeecCC-CCccCCCCeeEEecCCCHHHHHHHHHHcCC--CCCcEEEEec
Q 007567 309 VYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGT-GLTYETGDHVGVYCENLSETVEEALSLLGL--SPDTYFSLHT 385 (598)
Q Consensus 309 ~~d~~~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~-~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl--~~d~~~~i~~ 385 (598)
.|+.++|+.|+|+.|++|+.++++|+|+|||||++++ +++|+|||||+|||.|+++.|++++++||+ ++|+.++++.
T Consensus 24 ~~~~~~~~~a~v~~~~~l~~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~~~~~~d~~v~~~~ 103 (435)
T 1f20_A 24 NVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEM 103 (435)
T ss_dssp HHHTSCCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTBSSCCCTTSCEEEEE
T ss_pred ccccCCcEEEEEEeEEECCCCCCCceEEEEEEECCCCCCCcCCCCCEEEEEecCCHHHHHHHHHHhCCCCCCCeEEEEec
Confidence 4677899999999999999989999999999999875 799999999999999999999999999976 7789998875
Q ss_pred CCCCCCCCCC---CCCCCCCCcccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCccCHHHHHHHHHHcC
Q 007567 386 DKEDGTPLGK---STLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQ 462 (598)
Q Consensus 386 ~~~~~~~~~~---~~~~~pfpp~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~~gk~~y~~~i~~~~ 462 (598)
.++...+.+. ...+.+|||||++++|++|+||+++|+|++|+.||+||+|++||++|++|++ ++++|.+|+...+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~p~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~--~~~~~~~~~~~~~ 181 (435)
T 1f20_A 104 LEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGKN 181 (435)
T ss_dssp EEEESSSTTCEEEEEECCSSCSBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHC
T ss_pred cccccCCCCccccccccCCCCCccHHHHHHhceecCCCCCHHHHHHHHHHCCCHHHHHHHHHhhc--CHHHHHHHHhccC
Confidence 3221111110 0235678899999999999999999999999999999999999999999996 7899999999999
Q ss_pred CCHHHHHhhCCCCCCChhhhHhhhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCC--CCcccCcchHHhhccCCCC
Q 007567 463 RSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPT--GRVHKGLCSTWMKNSLPME 540 (598)
Q Consensus 463 ~sl~dvL~~fps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~--g~~~~G~~S~~L~~~~~~~ 540 (598)
++++|||.+||++++|+++++.. +|+++||+|||||+|..+++.++|+|++|.++++. |+.+.|+||+||.++.++
T Consensus 182 ~~i~~vl~~fps~~~p~~~l~~~-lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l~~G- 259 (435)
T 1f20_A 182 PTMVEVLEEFPSIQMPATLLLTQ-LSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQAD- 259 (435)
T ss_dssp CCHHHHHHHSTTBCBCHHHHHHH-SCBCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCTT-
T ss_pred CCHHHHHHhCCcCCCCHHHHHHh-CCCCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhCCCC-
Confidence 99999999999999999999974 69999999999999987789999999999887664 467899999999987665
Q ss_pred CCCCCceEEEEEeC-CCccCCCCCCCcEEEEeCCCChHhHHHHHHHHhhc
Q 007567 541 KSNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 541 ~~~~~~~~~i~v~~-s~F~lp~~~~~PiImIg~GTGiAPfr~flqer~~~ 589 (598)
+.++|++++ +.|+||.++.+||||||+||||||||||||+|.+.
T Consensus 260 -----d~v~v~~~~~g~F~lp~~~~~piilIagGtGIAP~~s~l~~~~~~ 304 (435)
T 1f20_A 260 -----DVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFD 304 (435)
T ss_dssp -----CEEEEEEECCTTSSCCSCTTSCEEEECCGGGGHHHHHHHHHHHHH
T ss_pred -----CEEEEEEecCCCccCCCCCCCCEEEEECCcCcHHHHHHHHHHHHh
Confidence 468899975 59999988889999999999999999999999863
No 8
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=100.00 E-value=8.7e-51 Score=434.45 Aligned_cols=248 Identities=27% Similarity=0.470 Sum_probs=225.7
Q ss_pred cccCCCCCeeeEEeeeecccCCCCCCceeEEEEeecCCCCccCCCCeeEEecCCCHHHHHHHHHHcCCCCCcEEEEecCC
Q 007567 308 AVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDK 387 (598)
Q Consensus 308 ~~~d~~~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl~~d~~~~i~~~~ 387 (598)
++|+.++||.|+|+.|++|+.++++|+|+|||||+++++++|+|||||+|||+|+++.|++++++||+++|+.++++
T Consensus 4 ~~~~~~~~~~a~v~~~~~lt~~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~v~~~--- 80 (374)
T 1ddg_A 4 SPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVE--- 80 (374)
T ss_dssp CCCBTTBCEEEEEEEEEECSCTTCSSEEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCSCSEEEET---
T ss_pred CCCCCCCCEEEEEEEEEEeCCCCCCceEEEEEEEcCCCCcccCCCCEEEEEcCCCHHHHHHHHHHhCCCCCceEEEC---
Confidence 45788999999999999999989999999999999988999999999999999999999999999999999998874
Q ss_pred CCCCCCCCCCCCCCCCcccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCccCHHHHHHHHHHcCCCHHH
Q 007567 388 EDGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLE 467 (598)
Q Consensus 388 ~~~~~~~~~~~~~pfpp~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~~gk~~y~~~i~~~~~sl~d 467 (598)
+ .|||++++|++|+||+ +|+|++|+.||+||+|++ |++|+ ++++.|.+|+. +++++|
T Consensus 81 --~------------~~~tl~~~l~~~~di~-~p~~~~l~~la~~~~~~~----L~~l~--~~~~~~~~~~~--~~~~~~ 137 (374)
T 1ddg_A 81 --G------------KTLPLNEALQWHFELT-VNTANIVENYATLTRSET----LLPLV--GDKAKLQHYAA--TTPIVD 137 (374)
T ss_dssp --T------------EEEEHHHHHHHHBCCS-CCCHHHHHHHHHHHTCTT----TGGGT--TCTHHHHHHHH--HSCHHH
T ss_pred --C------------CCccHHHHHHhcccCC-CCCHHHHHHHHHHCCCHH----HHHHh--cChHHHHHHHc--CCCHHH
Confidence 1 1899999999999999 889999999999999974 88887 47889999987 589999
Q ss_pred HHhhCCCCCCChhhhHhhhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhc-cCCCCCCCCCc
Q 007567 468 VMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCS 546 (598)
Q Consensus 468 vL~~fps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~-~~~~~~~~~~~ 546 (598)
+|.+||+ +++.++++. +.++++||+|||||+|..+++.++|+|++|.+++. |+.+.|+||+||++ +.++ +
T Consensus 138 vl~~~p~-~~~~Gq~v~-l~~~~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~-~~~~~G~~S~~L~~~l~~G------d 208 (374)
T 1ddg_A 138 MVRFSPA-QLDAEALIN-LLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEE------G 208 (374)
T ss_dssp HHHHSCC-CCCHHHHHH-HSCBCCCEEEEBCCCTTTSCSEEEEEEEECEEEET-TEEEECHHHHHHHHSCCSS------C
T ss_pred HHHHCCC-CCCHHHHHh-hccCCCCccceecCCCCCCCCEEEEEEEEEEeecC-CCCCCCCchHHHHhcCCCC------C
Confidence 9999999 999999996 56889999999999998778999999999987775 78889999999998 6654 4
Q ss_pred eEEEEEeC-CCccCCCCCCCcEEEEeCCCChHhHHHHHHHHhhcc
Q 007567 547 WAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 547 ~~~i~v~~-s~F~lp~~~~~PiImIg~GTGiAPfr~flqer~~~~ 590 (598)
.++|++++ +.|+||.++.+|+||||+||||||||||||+|.+.+
T Consensus 209 ~v~v~~~~~g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~ 253 (374)
T 1ddg_A 209 EVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADE 253 (374)
T ss_dssp EEEEEEECCTTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHT
T ss_pred EEEEEEeeCCCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhcC
Confidence 68898865 589999888899999999999999999999998765
No 9
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=100.00 E-value=4.2e-35 Score=289.97 Aligned_cols=155 Identities=30% Similarity=0.459 Sum_probs=140.5
Q ss_pred ccCCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHH
Q 007567 101 DDGKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAA 180 (598)
Q Consensus 101 ~~~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~ 180 (598)
+..+++|+|+|||||||||.+|++|++.+. ++ ..++++++++++.+ ++..++.+||++||||+|+||+||+
T Consensus 37 ~~~~~kv~IlYgS~tGnte~~A~~La~~l~-~g--~~v~v~~l~~~~~~------~l~~~~~vI~~tsTyG~Ge~Pdna~ 107 (219)
T 3hr4_A 37 MASRVRVTILFATETGKSEALAWDLGALFS-CA--FNPKVVCMDKYRLS------CLEEERLLLVVTSTFGNGDCPGNGE 107 (219)
T ss_dssp HHTSCEEEEEEECSSSHHHHHHHHHHHHHT-TT--SEEEEEEGGGCCGG------GGGTCSEEEEEEECBTTTBCCGGGH
T ss_pred HhcCCcEEEEEECCchHHHHHHHHHHHHHH-cC--CCeEEEEcccCCHh------HhccCCeEEEEEeccCCCcCCHHHH
Confidence 445688999999999999999999999884 43 56789999999863 4778999999999999999999999
Q ss_pred HHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHHHHHHHHH
Q 007567 181 RFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPEL 260 (598)
Q Consensus 181 ~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L 260 (598)
.|+++|.+.. ..+++++||||||||++|++||.+++.++++|+++||++++|+++||+..+++++|+.|.+.+|++|
T Consensus 108 ~F~~~L~~~~---~~l~~~~~aVfGlGdssY~~F~~a~k~ld~~L~~lGa~~l~~~g~~D~~~~~e~~~~~W~~~l~~~l 184 (219)
T 3hr4_A 108 KLKKSLFMLK---ELNNKFRYAVFGLGSSMYPRFCAFAHDIDQKLSHLGASQLTPMGEGDELSGQEDAFRSWAVQTFKAA 184 (219)
T ss_dssp HHHHHHHHCC---CCSSCCEEEEEEEECTTSSSTTHHHHHHHHHHHHHTCEESSCCEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcc---hhhcCCEEEEEeCCCcchHHHhHHHHHHHHHHHHCCCCEeeCCEEEecCCCcHHHHHHHHHHHHHHH
Confidence 9999998642 3589999999999999999999999999999999999999999999998889999999999999999
Q ss_pred HhhhCCC
Q 007567 261 DNLLRDD 267 (598)
Q Consensus 261 ~~~~~~~ 267 (598)
++.++.+
T Consensus 185 ~~~~~~~ 191 (219)
T 3hr4_A 185 CETFDVR 191 (219)
T ss_dssp HHHTTCT
T ss_pred HHHcCCC
Confidence 9988643
No 10
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=99.96 E-value=1.6e-28 Score=238.82 Aligned_cols=147 Identities=31% Similarity=0.637 Sum_probs=130.4
Q ss_pred CCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHH
Q 007567 103 GKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARF 182 (598)
Q Consensus 103 ~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F 182 (598)
.+++++|+|+|+|||||++|+.|++.+.+.+ ..+++++++++. .++..++.+||++||| +|++|+++..|
T Consensus 20 ~~~kv~IvY~S~tGnTe~~A~~ia~~l~~~g--~~v~v~~l~~~~-------~~l~~~d~vi~g~~Ty-~G~~p~~~~~f 89 (191)
T 1bvy_F 20 HNTPLLVLYGSNMGTAEGTARDLADIAMSKG--FAPQVATLDSHA-------GNLPREGAVLIVTASY-NGHPPDNAKQF 89 (191)
T ss_dssp -CCCEEEEEECSSSHHHHHHHHHHHHHHTTT--CCCEEEEGGGST-------TCCCSSSEEEEEECCB-TTBCCTTTHHH
T ss_pred CCCeEEEEEECCChHHHHHHHHHHHHHHhCC--CceEEeeHHHhh-------hhhhhCCeEEEEEeec-CCCcCHHHHHH
Confidence 4678999999999999999999999998765 456788888753 2477889999999999 99999999999
Q ss_pred HHHHHhhcCCCcccCCceEEEEeecCCcc-hhHhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHHHHHHHHHH
Q 007567 183 YKWFTEQKEGGEWLQKLKYGVFGLGNRQY-EHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELD 261 (598)
Q Consensus 183 ~~~L~~~~~~~~~l~~~~yaVFGLGds~Y-~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~ 261 (598)
++||.... ...|++++|+|||+||++| ++||.+++.++++|+++||+++.+.+++|++.+++++|.+|.+.||++|.
T Consensus 90 l~~L~~~~--~~~l~~~~~avfG~Gds~y~~~f~~a~~~l~~~L~~~Ga~~v~~~~~~d~~~d~e~~~~~w~~~l~~~l~ 167 (191)
T 1bvy_F 90 VDWLDQAS--ADEVKGVRYSVFGCGDKNWATTYQKVPAFIDETLAAKGAENIADRGEADASDDFEGTYEEWREHMWSDVA 167 (191)
T ss_dssp HHHHHTCC--SSCCTTCCEEEEEEECTTSGGGTTHHHHHHHHHHHTTTCCCCEEEEEEETTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcc--chhhCCCEEEEEEccCCchhhhHhHHHHHHHHHHHHCCCeEeeccEEEecCCChHHHHHHHHHHHHHHhc
Confidence 99998542 2358999999999999999 69999999999999999999999999999866778889999999999996
No 11
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=99.94 E-value=1.2e-26 Score=220.41 Aligned_cols=150 Identities=30% Similarity=0.428 Sum_probs=129.5
Q ss_pred CCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHH
Q 007567 103 GKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARF 182 (598)
Q Consensus 103 ~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F 182 (598)
.+++++|+|+|+|||||++|+.|++.+.+.+ ..++++++++++. .++.+++.+||++||||.|++|+++..|
T Consensus 8 ~~~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g--~~v~~~~~~~~~~------~~l~~~d~ii~g~pt~g~G~~p~~~~~f 79 (167)
T 1ykg_A 8 EMPGITIISASQTGNARRVAEALRDDLLAAK--LNVKLVNAGDYKF------KQIASEKLLIVVTSTQGEGEPPEEAVAL 79 (167)
T ss_dssp ----CEEEEECSSSHHHHHHHHHHHHHHHHT--CCCEEEEGGGCCG------GGGGGCSEEEEEEECBGGGBCCGGGHHH
T ss_pred CCCeEEEEEECCchHHHHHHHHHHHHHHHCC--CceEEeehhhCCH------HHhccCCeEEEEEcccCCCcCChhHHHH
Confidence 4678999999999999999999999998765 3467888888764 3477899999999999999999999999
Q ss_pred HHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHHHHHHHHHHh
Q 007567 183 YKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDN 262 (598)
Q Consensus 183 ~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~~ 262 (598)
+++|.... ...+++++|+|||+||++|++||.+++.++++|+++|++++.+.+++| .+.++++.+|.+++++.|..
T Consensus 80 ~~~l~~~~--~~~l~~k~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~v~~~~~~d--~~~~~~~~~w~~~l~~~l~~ 155 (167)
T 1ykg_A 80 HKFLFSKK--APKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDAD--VEYQAAASEWRARVVDALKS 155 (167)
T ss_dssp HHHHTSTT--CCCCTTCEEEEEEECCTTSSSTTHHHHHHHHHHHHHTCEESSCCEEEC--TTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcc--ccccCCCEEEEEeecCCCHHHHHHHHHHHHHHHHHCCCeEeecceecC--CCcHHHHHHHHHHHHHHHHh
Confidence 99997531 235889999999999999999999999999999999999999998887 35689999999999999976
Q ss_pred hh
Q 007567 263 LL 264 (598)
Q Consensus 263 ~~ 264 (598)
.+
T Consensus 156 ~~ 157 (167)
T 1ykg_A 156 RA 157 (167)
T ss_dssp CC
T ss_pred hc
Confidence 54
No 12
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=99.93 E-value=9.9e-27 Score=215.82 Aligned_cols=144 Identities=26% Similarity=0.296 Sum_probs=125.2
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFY 183 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~ 183 (598)
|++++|+|+|+|||||++|+.|++.+.+.+ ..+.++++.+ . .++.+++.+||++||||.|++|+++..|+
T Consensus 1 M~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g--~~v~~~~~~~--~------~~l~~~d~vi~g~pt~g~g~~p~~~~~f~ 70 (147)
T 2hna_A 1 MADITLISGSTLGGAEYVAEHLAEKLEEAG--FTTETLHGPL--L------EDLPASGIWLVISSTHGAGDIPDNLSPFY 70 (147)
T ss_dssp CCSEEEECCTTSCCCHHHHHHHHHHHHHTT--CCEEEECCTT--S------CSSCSEEEEEEECCTTTTCCTTSSCHHHH
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHCC--CceEEecCCC--H------HHcccCCeEEEEECccCCCCCChhHHHHH
Confidence 468999999999999999999999998765 3456666542 2 24677899999999999999999999999
Q ss_pred HHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccCCC--CchHHHHHHHHHHHHHH
Q 007567 184 KWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQ--CIEDDFSAWRELVWPEL 260 (598)
Q Consensus 184 ~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~--~~e~~f~~W~~~l~~~L 260 (598)
++|.... ..+++++|+|||+||++|++||.+++.++++|+++|++++.+.+++|... +.++++.+|.++++++|
T Consensus 71 ~~l~~~~---~~l~~~~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~~~~d~~~~~~~~~~~~~w~~~~~~~l 146 (147)
T 2hna_A 71 EALQEQK---PDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWVNLL 146 (147)
T ss_dssp HHHHHHC---CCTTEEEEEEESCCHHHHSCSSSCTTHHHHHHHHHTCEECSSCBCCCCSSCCSSCSCCHHHHHHHHHHH
T ss_pred HHHHhhc---cccCCCEEEEEecccCCHHHHHHHHHHHHHHHHHcCCeEeeeeEEEecCCCCCcHHHHHHHHHHHHHHh
Confidence 9998631 25889999999999999999999999999999999999999999988753 57889999999999876
No 13
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=99.91 E-value=2.8e-24 Score=199.06 Aligned_cols=142 Identities=23% Similarity=0.295 Sum_probs=123.8
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhc-cCCeEEEEEecCCC--CCcchHHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLK-KENIVFFFLATYGD--GEPTDNAA 180 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~-~~~~vIf~~sTyG~--Geppdna~ 180 (598)
|++++|+|+|+||||+++|+.|++.+.+.+ ..++++|+++++.+ ++. +++.+||++||||+ |++|++++
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g--~~v~~~~~~~~~~~------~l~~~~d~ii~g~pty~~~~G~~p~~~~ 72 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGG--HEVTLLNAADASAE------NLADGYDAVLFGCSAWGMEDLEMQDDFL 72 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTT--CEEEEEETTTBCCT------TTTTTCSEEEEEECEECSSSCEECHHHH
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCC--CeEEEEehhhCCHh------HhcccCCEEEEEecccCCCCCCCcHHHH
Confidence 468999999999999999999999998765 56889999988753 467 89999999999998 99999999
Q ss_pred HHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccC--CCCchHHHHHHHHHHHH
Q 007567 181 RFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD--DQCIEDDFSAWRELVWP 258 (598)
Q Consensus 181 ~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~--~~~~e~~f~~W~~~l~~ 258 (598)
.|+++|... .+++++|+|||+||+.|.+||.+++.++++|+++|++++.+....+. +. ..+.+.+|.++|+.
T Consensus 73 ~fl~~l~~~-----~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~~~~~~~p~~-~~~~~~~~~~~l~~ 146 (148)
T 3f6r_A 73 SLFEEFDRI-----GLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIAEGLKMEGDASN-DPEAVASFAEDVLK 146 (148)
T ss_dssp HHHTTGGGT-----CCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECSCCEEEESSGGG-CHHHHHHHHHHHHH
T ss_pred HHHHHhhcc-----CCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEeecceEeecCcch-HHHHHHHHHHHHHh
Confidence 999998742 58899999999999999999999999999999999999988776554 23 66788899888765
Q ss_pred H
Q 007567 259 E 259 (598)
Q Consensus 259 ~ 259 (598)
.
T Consensus 147 ~ 147 (148)
T 3f6r_A 147 Q 147 (148)
T ss_dssp T
T ss_pred h
Confidence 3
No 14
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=99.87 E-value=3.6e-22 Score=184.39 Aligned_cols=141 Identities=25% Similarity=0.285 Sum_probs=122.1
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhcc-CCeEEEEEecCCCCC--cchHHHH
Q 007567 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKK-ENIVFFFLATYGDGE--PTDNAAR 181 (598)
Q Consensus 105 ~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~-~~~vIf~~sTyG~Ge--ppdna~~ 181 (598)
|+++|+|+|+||||+.+|+.|++.+.+.+ ..++++++++++.+ ++.+ ++.+||++||||.|. +|++++.
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g--~~v~~~~~~~~~~~------~l~~~~d~ii~~~p~y~~g~~~~p~~~~~ 72 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAG--YEVDSRDAASVEAG------GLFEGFDLVLLGCSTWGDDSIELQDDFIP 72 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHT--CEEEEEEGGGCCST------TTTTTCSEEEEEECEECSSSCEECTTTHH
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcC--CeeEEEehhhCCHH------HhcCcCCEEEEEeCCCCCCCcCCChhHHH
Confidence 47999999999999999999999998765 46788999887643 4677 899999999999999 9999999
Q ss_pred HHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccCCCC-chHHHHHHHHHHHH
Q 007567 182 FYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQC-IEDDFSAWRELVWP 258 (598)
Q Consensus 182 F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~-~e~~f~~W~~~l~~ 258 (598)
|+++|... .+++++++|||+||+.|.+||.+.+.+++.|+.+|++++.+....|.... ..+.+.+|.+++++
T Consensus 73 fl~~l~~~-----~l~~k~~~v~~~g~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~ 145 (147)
T 1f4p_A 73 LFDSLEET-----GAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRG 145 (147)
T ss_dssp HHHTGGGS-----CCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEEEESCGGGGHHHHHHHHHHHHT
T ss_pred HHHHHHhc-----ccCCCEEEEEeecCCChHHHHHHHHHHHHHHHHcCCeEhhcccccccCchhHHHHHHHHHHHHHh
Confidence 99998742 58899999999999999889999999999999999999988766654322 56789999988864
No 15
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus}
Probab=99.86 E-value=4e-22 Score=191.38 Aligned_cols=146 Identities=21% Similarity=0.399 Sum_probs=122.1
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcc-------
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPT------- 176 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Gepp------- 176 (598)
|++++|+|+|+|||||.+|+.|++.+... ..++++++++++. .++.+++++||++||||.|++|
T Consensus 1 M~kilIiY~S~tGnT~~iA~~ia~~l~~~---~~v~~~~~~~~~~------~~l~~~d~ii~g~pty~~G~~pg~~~~~~ 71 (182)
T 2wc1_A 1 MAKIGLFFGSDTGTTRKIAKQIKDMFDDE---VMAKPLNVNRADV------ADFMAYDFLILGTPTLGDGQLPGLSANAA 71 (182)
T ss_dssp CCSEEEEECCSSSHHHHHHHHHHTTSCTT---TBCCCEEGGGCCH------HHHHHCSEEEEEEECBTTTBCSSGGGTCS
T ss_pred CcEEEEEEECCCchHHHHHHHHHHHhccc---CceEEEEcccCCH------HHHhhCCeEEEEEeeCCCCCCCccccccc
Confidence 46899999999999999999999988542 2356778877653 4577899999999999999999
Q ss_pred -hHHHHHHHHHHhhcCCCcccCCceEEEEeecCCc-c-hhHhHHHHHHHHHHHhcCCeEeecc-----------------
Q 007567 177 -DNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQ-Y-EHFNKIAKVVDEILANQGAKRLVPV----------------- 236 (598)
Q Consensus 177 -dna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~-Y-~~Fn~~~k~ld~~L~~lGA~ri~~~----------------- 236 (598)
++++.|+++|.. ..+++++++|||+|++. | ++||.+.+.++++|.++|++.+.+.
T Consensus 72 ~~~~~~f~~~l~~-----~~l~gk~~avfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~~~~g~~~~~~~~~~~~~ 146 (182)
T 2wc1_A 72 SESWEEFLPRIAD-----QDFSGKTIALFGLGDQVTYPLEFVNALFFLHEFFSDRGANVVGRWPAKGYGFEDSLAVVEGE 146 (182)
T ss_dssp SCCHHHHGGGGTT-----CCCTTCEEEEEEECCTTTCTTSTTTHHHHHHHHHHTTTCEEECCEECTTSCCSCCTTEETTE
T ss_pred hhHHHHHHHHhhh-----ccCCCCEEEEEEeCCCcccchhHHHHHHHHHHHHHHCCCEEEEeecCCCcCcccchhhhcCc
Confidence 999999988864 35889999999999998 8 5899999999999999999998863
Q ss_pred --eec-cCCC---CchHHHHHHHHHHHHHHHhh
Q 007567 237 --GLG-DDDQ---CIEDDFSAWRELVWPELDNL 263 (598)
Q Consensus 237 --g~g-D~~~---~~e~~f~~W~~~l~~~L~~~ 263 (598)
|++ |.++ ..++++++|.++||++|...
T Consensus 147 ~~gl~~d~~~~~~~~~~~~~~w~~~l~~~l~~~ 179 (182)
T 2wc1_A 147 FLGLALDQDNQAALTPERLKGWLSLIAADFGLV 179 (182)
T ss_dssp ESSEEECTTTCGGGHHHHHHHHHHHTHHHHTCC
T ss_pred eeeeeccCCCCccccHHHHHHHHHHHHHHHhcc
Confidence 554 3222 25889999999999988643
No 16
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=99.85 E-value=1.1e-21 Score=187.95 Aligned_cols=143 Identities=22% Similarity=0.378 Sum_probs=119.4
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcc--------
Q 007567 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPT-------- 176 (598)
Q Consensus 105 ~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Gepp-------- 176 (598)
++++|+|+|+|||||.+|+.|++.+.. + ..++++++++.+. .++.+++.+||++||||+|++|
T Consensus 1 ~kilI~Y~S~tGnT~~iA~~ia~~l~~-~--~~v~~~~~~~~~~------~~l~~~d~iilg~pt~~~G~~pg~~~~~~~ 71 (179)
T 1yob_A 1 AKIGLFFGSNTGKTRKVAKSIKKRFDD-E--TMSDALNVNRVSA------EDFAQYQFLILGTPTLGEGELPGLSSDAEN 71 (179)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHTTSCT-T--TBCCCEEGGGCCH------HHHHTCSEEEEEEECBTTTBCSSGGGTCSS
T ss_pred CeEEEEEECCCcHHHHHHHHHHHHhCC-C--CceEEEEhhhCCH------HHHhcCCEEEEEeccCCCCcCCcccccccc
Confidence 479999999999999999999998854 2 3456778877653 4577899999999999999999
Q ss_pred hHHHHHHHHHHhhcCCCcccCCceEEEEeecCCc-c-hhHhHHHHHHHHHHHhcCCeEeecc------------------
Q 007567 177 DNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQ-Y-EHFNKIAKVVDEILANQGAKRLVPV------------------ 236 (598)
Q Consensus 177 dna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~-Y-~~Fn~~~k~ld~~L~~lGA~ri~~~------------------ 236 (598)
++++.|+++|.. ..+++++++|||+||+. | ++||.+++.++++|+++|++.+.+.
T Consensus 72 ~~~~~fl~~l~~-----~~l~gk~~a~fg~g~~~~y~~~~~~a~~~l~~~l~~~G~~~~~~~~~~g~~~~~s~~~~~~~f 146 (179)
T 1yob_A 72 ESWEEFLPKIEG-----LDFSGKTVALFGLGDQVGYPENYLDALGELYSFFKDRGAKIVGSWSTDGYEFESSEAVVDGKF 146 (179)
T ss_dssp CCHHHHHHHHTT-----CCCTTCEEEEEEECCTTTCTTTTTHHHHHHHHHHHTTTCEEECCBCCTTCCCSCCTTBSSSSB
T ss_pred hHHHHHHHHhhh-----cccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEeeccCCCCcccchhhhcCce
Confidence 999999999864 25889999999999998 9 5799999999999999999998763
Q ss_pred -ee-ccCC---CCchHHHHHHHHHHHHHHH
Q 007567 237 -GL-GDDD---QCIEDDFSAWRELVWPELD 261 (598)
Q Consensus 237 -g~-gD~~---~~~e~~f~~W~~~l~~~L~ 261 (598)
|+ .|.+ ...++++++|.++++++|.
T Consensus 147 ~gl~~d~~~~~~~~~~~i~~w~~~l~~~~~ 176 (179)
T 1yob_A 147 VGLALDLDNQSGKTDERVAAWLAQIAPEFG 176 (179)
T ss_dssp SSEEECTTTCGGGHHHHHHHHHHHHGGGGT
T ss_pred eccccCCCCCCcccHHHHHHHHHHHHHHHh
Confidence 43 2432 2368899999999987664
No 17
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=99.85 E-value=4.6e-21 Score=182.64 Aligned_cols=140 Identities=27% Similarity=0.429 Sum_probs=116.9
Q ss_pred eEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCC-CCcchHHHHhhccCCeEEEEEecCCCCCc----chHHH
Q 007567 106 KVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDY-ADEEDEYEEKLKKENIVFFFLATYGDGEP----TDNAA 180 (598)
Q Consensus 106 ~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~-~~~~~~~~~~l~~~~~vIf~~sTyG~Gep----pdna~ 180 (598)
+++|+|+|+|||||++|+.|++.+... .+++++++++ +. .++.+++.+||++||||+|++ |+++.
T Consensus 1 ki~I~Y~S~tGnT~~vA~~ia~~l~~~----~~~~~~~~~~~~~------~~l~~~d~ii~g~pt~~~G~~~~~~p~~~~ 70 (173)
T 2fcr_A 1 KIGIFFSTSTGNTTEVADFIGKTLGAK----ADAPIDVDDVTDP------QALKDYDLLFLGAPTWNTGADTERSGTSWD 70 (173)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHGGG----BCCCEEGGGCSCG------GGGGGCSEEEEEEECCSTTCSSCCSCSTHH
T ss_pred CEEEEEECCCchHHHHHHHHHHHhccC----CcEEEehhhcCCh------hHHccCCEEEEEEeecCCCCcCccCcHHHH
Confidence 489999999999999999999999753 3467788776 43 357889999999999999999 89999
Q ss_pred HHH-HHHHhhcCCCcccCCceEEEEeecCCc-c-hhHhHHHHHHHHHHHhcCCeEeecc-------------------ee
Q 007567 181 RFY-KWFTEQKEGGEWLQKLKYGVFGLGNRQ-Y-EHFNKIAKVVDEILANQGAKRLVPV-------------------GL 238 (598)
Q Consensus 181 ~F~-~~L~~~~~~~~~l~~~~yaVFGLGds~-Y-~~Fn~~~k~ld~~L~~lGA~ri~~~-------------------g~ 238 (598)
.|+ ++|.. ..+++++|+|||+||+. | ++||.+++.++++|+++|++.+.+. ++
T Consensus 71 ~fl~~~l~~-----~~l~gk~~avfg~g~~~~y~~~f~~a~~~l~~~l~~~G~~~~~~~~~~g~~~~~s~~~~~~~~~~l 145 (173)
T 2fcr_A 71 EFLYDKLPE-----VDMKDLPVAIFGLGDAEGYPDNFCDAIEEIHDCFAKQGAKPVGFSNPDDYDYEESKSVRDGKFLGL 145 (173)
T ss_dssp HHHHHTGGG-----CCCTTCEEEEEEEECTTTCTTSTTTHHHHHHHHHHHTTCEEECCBCGGGSCCSCCTTEETTEESSE
T ss_pred HHHHhhccc-----cccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEeecccCCcccccchhhhCCeeeee
Confidence 999 87764 35889999999999999 8 6999999999999999999998762 22
Q ss_pred --ccC--CCCchHHHHHHHHHHHHHH
Q 007567 239 --GDD--DQCIEDDFSAWRELVWPEL 260 (598)
Q Consensus 239 --gD~--~~~~e~~f~~W~~~l~~~L 260 (598)
+.+ +...++.+++|.+++++.|
T Consensus 146 ~~~~~~~~~~~~~~i~~w~~~i~~~~ 171 (173)
T 2fcr_A 146 PLDMVNDQIPMEKRVAGWVEAVVSET 171 (173)
T ss_dssp EEETTTCSSCHHHHHHHHHHHHHHHH
T ss_pred eecCCCCccccHHHHHHHHHHHHHHh
Confidence 222 2246888999999998776
No 18
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=99.85 E-value=3.5e-21 Score=183.86 Aligned_cols=143 Identities=25% Similarity=0.385 Sum_probs=119.7
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHHH
Q 007567 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFYK 184 (598)
Q Consensus 105 ~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~ 184 (598)
|+++|+|+|+|||||++|+.|++.+... .+++++++++.. .++.+++++||++||||.|++|+++..|++
T Consensus 1 Mki~IvY~S~tGnT~~iA~~Ia~~l~~~----~v~i~~~~~~~~------~~l~~~d~ii~g~pt~~~G~~p~~~~~f~~ 70 (175)
T 1ag9_A 1 AITGIFFGSDTGNTENIAKMIQKQLGKD----VADVHDIAKSSK------EDLEAYDILLLGIPTWYYGEAQCDWDDFFP 70 (175)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHCTT----TEEEEEGGGCCH------HHHHTCSEEEEECCEETTTEECHHHHHHHH
T ss_pred CEEEEEEECCCchHHHHHHHHHHHhccC----ceEEEEcccCCh------hHhhhCCEEEEEEeecCCCcChHHHHHHHh
Confidence 5799999999999999999999998653 367888877653 457789999999999999999999999999
Q ss_pred HHHhhcCCCcccCCceEEEEeecCCc-c-hhHhHHHHHHHHHHHhcCCeEeecc--------------------ee-ccC
Q 007567 185 WFTEQKEGGEWLQKLKYGVFGLGNRQ-Y-EHFNKIAKVVDEILANQGAKRLVPV--------------------GL-GDD 241 (598)
Q Consensus 185 ~L~~~~~~~~~l~~~~yaVFGLGds~-Y-~~Fn~~~k~ld~~L~~lGA~ri~~~--------------------g~-gD~ 241 (598)
+|.. ..++|++++|||+||+. | ++||.+.+.+++.|+++|++.+... |+ .|.
T Consensus 71 ~l~~-----~~l~gk~vavfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~~~~g~~~~~s~~~~~~~~~~gl~~~~ 145 (175)
T 1ag9_A 71 TLEE-----IDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDE 145 (175)
T ss_dssp HHTT-----CCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHTTTTCEECCCEECTTCCCSCCSCEEETTEESSEEECT
T ss_pred hhhh-----cccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEEecCCCcccccchheeeCCeEEeeecCC
Confidence 9974 25889999999999987 8 7999999999999999999988642 11 121
Q ss_pred -CC--CchHHHHHHHHHHHHHHHh
Q 007567 242 -DQ--CIEDDFSAWRELVWPELDN 262 (598)
Q Consensus 242 -~~--~~e~~f~~W~~~l~~~L~~ 262 (598)
.+ ..++++.+|.++|++.|..
T Consensus 146 ~~~~~~~~~~i~~w~~~i~~~~~~ 169 (175)
T 1ag9_A 146 DRQPELTAERVEKWVKQISEELHL 169 (175)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTH
T ss_pred CCcccccHHHHHHHHHHHHHHhhh
Confidence 12 2567899999999998864
No 19
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=99.84 E-value=2.2e-21 Score=183.02 Aligned_cols=138 Identities=25% Similarity=0.367 Sum_probs=113.5
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFY 183 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~ 183 (598)
|++++|+|+|+|||||++|+.|++.+ + . ++++++++++. .++.+++.+||++||||.|++|+++..|+
T Consensus 1 M~k~~I~Y~S~tGnT~~~A~~ia~~l---g--~-~~~~~~~~~~~------~~l~~~d~ii~g~pt~~~g~~p~~~~~f~ 68 (164)
T 2bmv_A 1 MGKIGIFFGTDSGNAEAIAEKISKAI---G--N-AEVVDVAKASK------EQFNSFTKVILVAPTAGAGDLQTDWEDFL 68 (164)
T ss_dssp -CCEEEEECCSSSHHHHHHHHHHHHH---C--S-EEEEEGGGCCH------HHHTTCSEEEEEEEEETTTEECHHHHHHH
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHc---C--C-cEEEecccCCH------hHHhhCCEEEEEECCcCCCcCcHHHHHHH
Confidence 46899999999999999999999988 2 3 68889887763 45778999999999999999999999999
Q ss_pred HHHHhhcCCCcccCCceEEEEeecCCc-ch-hHhHHHHHHHHHHHhcCCeEeecc-------------------eeccC-
Q 007567 184 KWFTEQKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGAKRLVPV-------------------GLGDD- 241 (598)
Q Consensus 184 ~~L~~~~~~~~~l~~~~yaVFGLGds~-Y~-~Fn~~~k~ld~~L~~lGA~ri~~~-------------------g~gD~- 241 (598)
++|... .|++++|+|||+||+. |. +||.+++.++++|++ ++++.+. ++..+
T Consensus 69 ~~l~~~-----~l~~k~~avf~~G~~~~y~~~~~~a~~~l~~~l~~--~~~~~~~~~~g~~~~~s~~~~~~~~~~l~~~~ 141 (164)
T 2bmv_A 69 GTLEAS-----DFANKTIGLVGLGDQDTYSETFAEGIFHIYEKAKA--GKVVGQTSTDGYHFEASKAVEGGKFVGLVIDE 141 (164)
T ss_dssp TTCCTH-----HHHTSEEEEEEECCTTTCTTSTTTHHHHHHHHHTT--SEECCCEESTTCCCSCCTTEETTEESSEEECT
T ss_pred HHHhhh-----hcCCCEEEEEEeCCcchhhHHHhHHHHHHHHHHhh--CEEEccccCCCccccchhhhhcCcccCccCCC
Confidence 887642 4889999999999996 97 699999999999998 7877763 33222
Q ss_pred C---CCchHHHHHHHHHHHHHH
Q 007567 242 D---QCIEDDFSAWRELVWPEL 260 (598)
Q Consensus 242 ~---~~~e~~f~~W~~~l~~~L 260 (598)
. ...++.+.+|.+++++.|
T Consensus 142 ~~~~~~~~~~~~~w~~~l~~~l 163 (164)
T 2bmv_A 142 DNQDDLTDERISKWVEQVKGSF 163 (164)
T ss_dssp TTCGGGHHHHHHHHHHHHTTTC
T ss_pred CCccccCHHHHHHHHHHHHHhh
Confidence 1 135788999999886543
No 20
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=99.84 E-value=1.8e-20 Score=177.23 Aligned_cols=142 Identities=22% Similarity=0.385 Sum_probs=120.0
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHHH
Q 007567 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFYK 184 (598)
Q Consensus 105 ~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~ 184 (598)
++++|+|+|+||||+++|+.|++.+.+. .++++++++++. +++.+++.+||++||||.|.+|+++..|++
T Consensus 2 mkilIiY~S~tGnT~~vA~~ia~~l~~~----~v~~~~~~~~~~------~~l~~~d~ii~g~p~y~~g~~p~~~~~fl~ 71 (169)
T 1obo_A 2 KKIGLFYGTQTGKTESVAEIIRDEFGND----VVTLHDVSQAEV------TDLNDYQYLIIGCPTLNIGELQSDWEGLYS 71 (169)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHCTT----TEEEEETTTCCG------GGGGGCSEEEEEEEEETTTEECHHHHHHHT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHhCcC----CcEEEEcccCCH------HHHhhCCEEEEEEeeCCCCcCCHHHHHHHH
Confidence 5799999999999999999999998653 468899988875 357889999999999999999999999999
Q ss_pred HHHhhcCCCcccCCceEEEEeecCCc-ch-hHhHHHHHHHHHHHhcCCeEeecc-------------------e--eccC
Q 007567 185 WFTEQKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGAKRLVPV-------------------G--LGDD 241 (598)
Q Consensus 185 ~L~~~~~~~~~l~~~~yaVFGLGds~-Y~-~Fn~~~k~ld~~L~~lGA~ri~~~-------------------g--~gD~ 241 (598)
+|.. ..+++++++|||+|++. |. +||.+.+.+++.|+++|++.+.+. + .+.+
T Consensus 72 ~l~~-----~~l~~k~~~~f~tg~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~g~~~~~s~~~~~~~~~~l~~~~~ 146 (169)
T 1obo_A 72 ELDD-----VDFNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVGYWSTDGYDFNDSKALRNGKFVGLALDED 146 (169)
T ss_dssp TGGG-----CCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEECTTCCCSCCTTEETTEESSEEECTT
T ss_pred Hhhh-----cCcCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEeecCCCcccccchhhcCCceeeEEeeCC
Confidence 8874 25889999999999984 96 899999999999999999988651 2 2222
Q ss_pred --CCCchHHHHHHHHHHHHHHH
Q 007567 242 --DQCIEDDFSAWRELVWPELD 261 (598)
Q Consensus 242 --~~~~e~~f~~W~~~l~~~L~ 261 (598)
+...++++.+|.+++++.|.
T Consensus 147 ~~~~~~~~~~~~w~~~~~~~l~ 168 (169)
T 1obo_A 147 NQSDLTDDRIKSWVAQLKSEFG 168 (169)
T ss_dssp TCGGGHHHHHHHHHHHHHHHHT
T ss_pred CccccCHHHHHHHHHHHHHHhc
Confidence 22467889999999998773
No 21
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=99.83 E-value=2.2e-20 Score=176.61 Aligned_cols=142 Identities=23% Similarity=0.395 Sum_probs=119.3
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHHH
Q 007567 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFYK 184 (598)
Q Consensus 105 ~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~ 184 (598)
++++|+|+|+||||+++|+.|++.+... ..++++++++++. .++.+++.+||++|||+.|++|++++.|++
T Consensus 1 ~kilIvY~S~tGnT~~vA~~ia~~l~~~---~~v~~~~~~~~~~------~~l~~~d~ii~g~pty~~g~~p~~~~~f~~ 71 (169)
T 1czn_A 1 AKIGLFYGTQTGVTQTIAESIQQEFGGE---SIVDLNDIANADA------SDLNAYDYLIIGCPTWNVGELQSDWEGIYD 71 (169)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHTST---TTEEEEEGGGCCG------GGGGGCSEEEEECCEETTTEECHHHHHHGG
T ss_pred CeEEEEEECCCcHHHHHHHHHHHHhCcc---cceEEEEhhhCCH------hHHhhCCEEEEEecccCCCcCCHHHHHHHH
Confidence 4799999999999999999999998643 2468889988764 357889999999999999999999999999
Q ss_pred HHHhhcCCCcccCCceEEEEeecCCc-ch-hHhHHHHHHHHHHHhcCCeEeecc-------------------ee-ccCC
Q 007567 185 WFTEQKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGAKRLVPV-------------------GL-GDDD 242 (598)
Q Consensus 185 ~L~~~~~~~~~l~~~~yaVFGLGds~-Y~-~Fn~~~k~ld~~L~~lGA~ri~~~-------------------g~-gD~~ 242 (598)
+|.. ..++++++++||+|++. |. +||.+.+.+++.|+++|++.+... ++ .|.+
T Consensus 72 ~l~~-----~~l~gk~~~~f~t~~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~g~~~~~s~~~~~~~~~gl~~~~~ 146 (169)
T 1czn_A 72 DLDS-----VNFQGKKVAYFGAGDQVGYSDNFQDAMGILEEKISSLGSQTVGYWPIEGYDFNESKAVRNNQFVGLAIDED 146 (169)
T ss_dssp GGGG-----SCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEECTTCCCSCCTTEETTEESSEEECTT
T ss_pred Hhhh-----hccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEEEecCCCcceecchheeCCeeeeeeecCC
Confidence 9864 25889999999999996 96 899999999999999999988631 22 2222
Q ss_pred ---CCchHHHHHHHHHHHHHH
Q 007567 243 ---QCIEDDFSAWRELVWPEL 260 (598)
Q Consensus 243 ---~~~e~~f~~W~~~l~~~L 260 (598)
...++++.+|.+++++.|
T Consensus 147 ~~~~~~~~~~~~w~~~~~~~~ 167 (169)
T 1czn_A 147 NQPDLTKNRIKTWVSQLKSEF 167 (169)
T ss_dssp TCGGGHHHHHHHHHHHHHHHT
T ss_pred CccccCHHHHHHHHHHHHHHh
Confidence 246788999999998876
No 22
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=99.76 E-value=6.9e-18 Score=154.09 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=100.6
Q ss_pred EEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcch-HHHHHHHH
Q 007567 107 VTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTD-NAARFYKW 185 (598)
Q Consensus 107 v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppd-na~~F~~~ 185 (598)
|+|+|+|+||||+++|+.|++.+.+.+ ..++++|+.+++. .++.+++.+||++||||.|.+|+ ++..|+++
T Consensus 1 i~I~Y~S~tGnT~~iA~~ia~~l~~~g--~~v~~~~~~~~~~------~~l~~~d~iiig~pty~~g~~p~~~~~~fl~~ 72 (138)
T 5nul_A 1 MKIVYWSGTGNTEKMAELIAKGIIESG--KDVNTINVSDVNI------DELLNEDILILGCSAMTDEVLEESEFEPFIEE 72 (138)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHHTT--CCCEEEEGGGCCH------HHHTTCSEEEEEECCBTTTBCCTTTHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHHHHCC--CeEEEEEhhhCCH------HHHhhCCEEEEEcCccCCCCCChHHHHHHHHH
Confidence 589999999999999999999998876 4578999988874 46788999999999999999897 99999999
Q ss_pred HHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceecc
Q 007567 186 FTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGD 240 (598)
Q Consensus 186 L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD 240 (598)
|.. .++++++++||+++.. ||.+.+.++++|+++|++.+.+....+
T Consensus 73 l~~------~l~~k~~~~f~t~g~~---~~~a~~~l~~~l~~~G~~~v~~~~~~~ 118 (138)
T 5nul_A 73 IST------KISGKKVALFGSYGWG---DGKWMRDFEERMNGYGCVVVETPLIVQ 118 (138)
T ss_dssp HGG------GCTTCEEEEEEEESSS---CSHHHHHHHHHHHHTTCEECSCCEEEE
T ss_pred HHh------hcCCCEEEEEEecCCC---CChHHHHHHHHHHHCCCEEECCceEEe
Confidence 864 2889999999976544 388999999999999999997654443
No 23
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.75 E-value=8.6e-18 Score=175.23 Aligned_cols=182 Identities=21% Similarity=0.308 Sum_probs=123.6
Q ss_pred ccCCCCCeeeEEeeeecccCCCCCCceeEEEEeecCCCCccCCCCeeEEecCCCHHHHHHHHHHcCCCCCcEEEEecCCC
Q 007567 309 VYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKE 388 (598)
Q Consensus 309 ~~d~~~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl~~d~~~~i~~~~~ 388 (598)
.|..++|+.++|+.+.+|+.++....++||+|+..+ .+.|.+|++++|.|+..+.. ... +. . .+.
T Consensus 9 ~~~~~~p~~~~v~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~GQ~~~i~~~~~~~~-----~~~----~~--~---~~~ 73 (316)
T 3jqq_A 9 LYTVKNPLKCKIVDKINLVRPNSPNEVYHLEINHNG-LFKYLEGHTCGIIPYYNELD-----NNP----NN--Q---INK 73 (316)
T ss_dssp SSCSSSCEEEEEEEEEECSCTTCSCCEEEEEEECTT-CCCCCTTCEEEECTTCC--------------------------
T ss_pred eecCCCCEEEEEEeeEEccCCCCCCceEEEEEeCCC-CcceecCcEeEEECCCcccc-----ccc----cc--c---ccc
Confidence 466789999999999999988888899999999854 69999999999999875422 000 00 0 000
Q ss_pred CCCCCCCCCCCCCCCcccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCccCHHHHHHHHHHcCCCHHHH
Q 007567 389 DGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEV 468 (598)
Q Consensus 389 ~~~~~~~~~~~~pfpp~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~~gk~~y~~~i~~~~~sl~dv 468 (598)
+|. ++-+++ ++ . +..++
T Consensus 74 ~~~----------------------~~~~~~------------~~---------~------------------h~~~~-- 90 (316)
T 3jqq_A 74 DHN----------------------IINTTN------------HT---------N------------------HNNIA-- 90 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc----------------------cccccc------------cc---------c------------------ccccc--
Confidence 000 000000 00 0 00000
Q ss_pred HhhCCCCCCChhhhHhhhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCC---CCCcccCcchHHhhccCCCCCCCCC
Q 007567 469 MSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTP---TGRVHKGLCSTWMKNSLPMEKSNDC 545 (598)
Q Consensus 469 L~~fps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~---~g~~~~G~~S~~L~~~~~~~~~~~~ 545 (598)
. ..+-+...+|.|||||+|.. +.++|+|+++.|.+. .++.+.|.||+||.++.+++
T Consensus 91 -------~-------~~~~g~~~~R~ySIaS~p~~--~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~Gd----- 149 (316)
T 3jqq_A 91 -------L-------SHIKKQRCARLYSISSSNNM--ENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKIND----- 149 (316)
T ss_dssp --------------------CCCCEEEEBCSCTTS--SSEEEEEECCBC---------CCBCHHHHHHHTCCTTC-----
T ss_pred -------c-------ccCCCcccceeeecccCCCC--CeEEEEEEEEEecccccccCcCCCCchhHHHhhCCCCC-----
Confidence 0 01225678999999999975 589999988755432 34568899999998887753
Q ss_pred ceEEEEEeCCCccCCCC---CCCcEEEEeCCCChHhHHHHHHHHhhcc
Q 007567 546 SWAPIFVRQSNFKLPAD---AKVPIIMIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 546 ~~~~i~v~~s~F~lp~~---~~~PiImIg~GTGiAPfr~flqer~~~~ 590 (598)
.+.|..+.|.|.+|.+ ...|+||||+|||||||++||+++...+
T Consensus 150 -~v~v~gP~G~f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~ 196 (316)
T 3jqq_A 150 -DIYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYD 196 (316)
T ss_dssp -EEEEEEEECCCCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCC
T ss_pred -EEEEEecCCceEcCCcccCCCCcEEEEeCCceechHHHHHHHHHHhc
Confidence 5777778899999986 3789999999999999999999998754
No 24
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=99.73 E-value=3.2e-17 Score=169.26 Aligned_cols=153 Identities=25% Similarity=0.398 Sum_probs=122.3
Q ss_pred ccCCCCCeeeEEeeeecccCCCCCCceeEEEEeecCCCCccCCCCeeEEecCCCHHHHHHHHHHcCCCCCcEEEEecCCC
Q 007567 309 VYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKE 388 (598)
Q Consensus 309 ~~d~~~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl~~d~~~~i~~~~~ 388 (598)
.|+...|+.++|+.+++|+..+++++++|++|++++..+.|+||+++.|++.|.. .
T Consensus 15 ~~~~~~~~~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~------------------------~ 70 (304)
T 2bmw_A 15 LYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVD------------------------K 70 (304)
T ss_dssp SBBTTBCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBC------------------------T
T ss_pred ccCCCCCEEEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCc------------------------c
Confidence 4566788999999999999877888999999999766689999999999987621 0
Q ss_pred CCCCCCCCCCCCCCCcccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCccCHHHHHHHHHHcCCCHHHH
Q 007567 389 DGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEV 468 (598)
Q Consensus 389 ~~~~~~~~~~~~pfpp~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~~gk~~y~~~i~~~~~sl~dv 468 (598)
+|
T Consensus 71 ~g------------------------------------------------------------------------------ 72 (304)
T 2bmw_A 71 NG------------------------------------------------------------------------------ 72 (304)
T ss_dssp TS------------------------------------------------------------------------------
T ss_pred cC------------------------------------------------------------------------------
Confidence 00
Q ss_pred HhhCCCCCCChhhhHhhhcCCCCCcccccCCCCCC---CCCeEEEEEEEEEeeCCC-CCcccCcchHHhhccCCCCCCCC
Q 007567 469 MSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTPT-GRVHKGLCSTWMKNSLPMEKSND 544 (598)
Q Consensus 469 L~~fps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~---~~~~i~itv~~v~~~~~~-g~~~~G~~S~~L~~~~~~~~~~~ 544 (598)
.++++|.|||+|+|.. .++.++|+|+++.++++. |+.+.|.||+||+++.+++
T Consensus 73 -------------------~~~~~R~ySias~~~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~Gd---- 129 (304)
T 2bmw_A 73 -------------------KPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGS---- 129 (304)
T ss_dssp -------------------CBCCCEEEEBCSCTTTTTTSSSEEEEEEECCEECSSSSSSCEECHHHHHHHTCCTTC----
T ss_pred -------------------CCCCCcceecCCCCcccCCCCCEEEEEEEEEEeeccccCcCCCcchhhHHhcCCCCC----
Confidence 0136899999999863 357999999887666543 5567899999999976653
Q ss_pred CceEEEEEeCCCc-cCCCCCCCcEEEEeCCCChHhHHHHHHHHhh
Q 007567 545 CSWAPIFVRQSNF-KLPADAKVPIIMIGPGTGLAPFRGSWSRTGT 588 (598)
Q Consensus 545 ~~~~~i~v~~s~F-~lp~~~~~PiImIg~GTGiAPfr~flqer~~ 588 (598)
.+.|..+.++| .+|.+...|+||||+|||||||++||+++..
T Consensus 130 --~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~ 172 (304)
T 2bmw_A 130 --EVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFK 172 (304)
T ss_dssp --EEEEEEEECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHC
T ss_pred --EEEEEeccCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHHH
Confidence 57777777875 5776667899999999999999999998754
No 25
>2xod_A NRDI protein, NRDI; flavoprotein, redox protein, ribonucleotide reductase; HET: FMN; 0.96A {Bacillus anthracis} PDB: 2xoe_A* 2x2o_A* 2x2p_A*
Probab=99.71 E-value=9.5e-18 Score=150.17 Aligned_cols=116 Identities=15% Similarity=0.165 Sum_probs=86.7
Q ss_pred EEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHHHHH
Q 007567 107 VTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFYKWF 186 (598)
Q Consensus 107 v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~~L 186 (598)
++|+|+|+|||||++|++|+ +. + + ++++ +.+ .++.+||++||||+|++|+++..|++.
T Consensus 1 ~~I~Y~S~tGnT~~~A~~ia--~~--~----~---~i~~---------~~~-~~~~ii~g~pt~~~g~~p~~~~~fl~~- 58 (119)
T 2xod_A 1 MLVAYDSMTGNVKRFIHKLN--MP--A----V---QIGE---------DLV-IDEDFILITYTTGFGNVPERVLEFLER- 58 (119)
T ss_dssp CEEEECCSSSHHHHHHHHHT--SC--E----E---ECCT---------TCC-CCSCEEEEECCBTTTBCCHHHHHHHHH-
T ss_pred CEEEEECCChhHHHHHHHhc--cc--C----C---CcCc---------ccc-cCCCEEEEEeecCCCcCCHHHHHHHHH-
Confidence 47999999999999999998 21 1 2 2322 123 478999999999999999999999854
Q ss_pred HhhcCCCcccCCceEEEEeecCCcchh-HhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHHHHHH
Q 007567 187 TEQKEGGEWLQKLKYGVFGLGNRQYEH-FNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVW 257 (598)
Q Consensus 187 ~~~~~~~~~l~~~~yaVFGLGds~Y~~-Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~ 257 (598)
+++++|+|||+||+.|.+ ||.+++.++++|.. ...... .+..+....+.+.+|.++++
T Consensus 59 ---------~~~~~~~v~g~G~~~y~~~~~~~~~~l~~~~~~---~~~~~~-~~~~~~~d~~~~~~~~~~i~ 117 (119)
T 2xod_A 59 ---------NNEKLKGVSASGNRNWGDMFGASADKISAKYEV---PIVSKF-ELSGTNNDVEYFKERVREIA 117 (119)
T ss_dssp ---------HGGGEEEEEEEECGGGGGGTTHHHHHHHHHHTC---CEEEEE-ETTCCHHHHHHHHHHHHHHT
T ss_pred ---------cCCCEEEEEEeCCChHHHHHHHHHHHHHHHhCC---ccEEEE-ecCCCHHHHHHHHHHHHHhc
Confidence 457899999999999976 99999999999743 332222 22222223456889988775
No 26
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=99.71 E-value=7.2e-17 Score=167.65 Aligned_cols=154 Identities=23% Similarity=0.358 Sum_probs=124.2
Q ss_pred ccCCCCCeeeEEeeeecccCCCCCCceeEEEEeecCCCCccCCCCeeEEecCCCHHHHHHHHHHcCCCCCcEEEEecCCC
Q 007567 309 VYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKE 388 (598)
Q Consensus 309 ~~d~~~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl~~d~~~~i~~~~~ 388 (598)
.++...|+.++|+.+++++..+++++++|++|+.++ .+.|+||+|+.|++.|.. .
T Consensus 31 ~~~~~~~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~-~~~~~pGQ~v~l~~~~~~------------------------~ 85 (314)
T 1fnb_A 31 KFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSHEG-EIPYREGQSVGVIPDGED------------------------K 85 (314)
T ss_dssp SBBTTBCEEEEEEEEEECSCSSSSSCEEEEEEECTT-CCCCCTTCEEEEECSSBC------------------------T
T ss_pred ccCCCCCEEEEEEEEEEecCCCCCCcEEEEEEecCC-CCCcCCCCEEEEecCCCC------------------------c
Confidence 455677889999999999977777899999999875 489999999999887521 0
Q ss_pred CCCCCCCCCCCCCCCcccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCccCHHHHHHHHHHcCCCHHHH
Q 007567 389 DGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEV 468 (598)
Q Consensus 389 ~~~~~~~~~~~~pfpp~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~~gk~~y~~~i~~~~~sl~dv 468 (598)
+|
T Consensus 86 ------------------------------------------------------------~g------------------ 87 (314)
T 1fnb_A 86 ------------------------------------------------------------NG------------------ 87 (314)
T ss_dssp ------------------------------------------------------------TS------------------
T ss_pred ------------------------------------------------------------CC------------------
Confidence 00
Q ss_pred HhhCCCCCCChhhhHhhhcCCCCCcccccCCCCCC---CCCeEEEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCC
Q 007567 469 MSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDC 545 (598)
Q Consensus 469 L~~fps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~---~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~ 545 (598)
.++++|.|||+|+|.. .++.++|+|+++.|.+..|+.+.|.||+||+++.+++
T Consensus 88 -------------------~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~~y~~~~g~~~~G~~S~~L~~l~~Gd----- 143 (314)
T 1fnb_A 88 -------------------KPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGA----- 143 (314)
T ss_dssp -------------------SBCCCEEEECCSCSSCTTSSSCEEEEEEECCEEECTTSCEEECHHHHHHHHCCTTC-----
T ss_pred -------------------CcCCceeEecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCCchhhHhhcCCCCC-----
Confidence 0136899999999864 3579999999887777778778899999999976653
Q ss_pred ceEEEEEeCCCc-cCCCCCCCcEEEEeCCCChHhHHHHHHHHhhcc
Q 007567 546 SWAPIFVRQSNF-KLPADAKVPIIMIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 546 ~~~~i~v~~s~F-~lp~~~~~PiImIg~GTGiAPfr~flqer~~~~ 590 (598)
.+.|..+.++| .+|.+...|+||||+|||||||++||+++...+
T Consensus 144 -~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~ 188 (314)
T 1fnb_A 144 -EVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEK 188 (314)
T ss_dssp -EEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCC
T ss_pred -EEEEEeccCCceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhc
Confidence 57777778876 466656789999999999999999999987653
No 27
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=99.69 E-value=9.5e-17 Score=151.28 Aligned_cols=142 Identities=13% Similarity=0.057 Sum_probs=110.7
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHHH
Q 007567 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFYK 184 (598)
Q Consensus 105 ~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~ 184 (598)
|+|+|+|+|+||||+++|+.|++.+.+.+ ..++++|+.+.+.++ +..++.+++.+||++|||| |++|+ ..|++
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g--~~v~~~~~~~~~~~~--~~~~~~~~d~ii~Gspty~-g~~p~--~~fl~ 73 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTG--VAVEMVDLRAVDPQE--LIEAVSSARGIVLGTPPSQ-PSEAV--ATALS 73 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTT--CCEEEEETTTCCHHH--HHHHHHHCSEEEEECCBSS-CCHHH--HHHHH
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCC--CeEEEEECCCCCHHH--HHHHHHhCCEEEEEcCCcC-CchhH--HHHHH
Confidence 57999999999999999999999998765 457899998876532 3345678999999999996 88875 88999
Q ss_pred HHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccC--CCCchHHHHHHHHHHHHHHHh
Q 007567 185 WFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD--DQCIEDDFSAWRELVWPELDN 262 (598)
Q Consensus 185 ~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~--~~~~e~~f~~W~~~l~~~L~~ 262 (598)
.|... .++++++++|| +|.++|.+.+.++++|+++|++.+.+...... +....+...+|-+.+...|.+
T Consensus 74 ~l~~~-----~l~gk~v~~fg----s~g~~g~a~~~l~~~l~~~G~~~v~~~~~~~~~P~~~dl~~~~~~g~~la~~l~~ 144 (161)
T 3hly_A 74 TIFAA-----AHNKQAIGLFD----SYGGDDEPIDALLAQFRNLGLHTAFPPIRVKDQPTEAIYQQCEESGTDLGQWLTR 144 (161)
T ss_dssp HHHHH-----CCTTSEEEEEC----CCCSSBCCHHHHHHHHHHTTCEESSSCBCCCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhh-----hhCCCEEEEEE----cCCCCcHHHHHHHHHHHHCCCEEecCceEEeeCCCHHHHHHHHHHHHHHHHHHHh
Confidence 88753 47899999999 46677899999999999999999876443322 222334566777777666653
No 28
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=99.68 E-value=1.4e-16 Score=150.10 Aligned_cols=143 Identities=10% Similarity=0.030 Sum_probs=112.8
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCC-CCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDY-ADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARF 182 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~-~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F 182 (598)
.++|+|+|+|+||||+++|+.|++.+.+.+ ..++++|+.+. +.++ ...++.+++.+||++|||+ |++| +..|
T Consensus 4 ~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g--~~v~~~~~~~~~~~~~--~~~~~~~~d~ii~Gspty~-g~~p--~~~~ 76 (159)
T 3fni_A 4 ETSIGVFYVSEYGYSDRLAQAIINGITKTG--VGVDVVDLGAAVDLQE--LRELVGRCTGLVIGMSPAA-SAAS--IQGA 76 (159)
T ss_dssp CCEEEEEECTTSTTHHHHHHHHHHHHHHTT--CEEEEEESSSCCCHHH--HHHHHHTEEEEEEECCBTT-SHHH--HHHH
T ss_pred CCEEEEEEECCChHHHHHHHHHHHHHHHCC--CeEEEEECcCcCCHHH--HHHHHHhCCEEEEEcCcCC-CCcc--HHHH
Confidence 468999999999999999999999998765 56789999887 5432 3346778999999999997 8877 3889
Q ss_pred HHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccC--CCCchHHHHHHHHHHHHHH
Q 007567 183 YKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD--DQCIEDDFSAWRELVWPEL 260 (598)
Q Consensus 183 ~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~--~~~~e~~f~~W~~~l~~~L 260 (598)
++.|... .++++++++|| +|.|+|.+.+.+.++|+++|++.+.+...... +....+...+|-+.|...+
T Consensus 77 l~~l~~~-----~~~~k~va~fg----s~g~~~~a~~~l~~~l~~~G~~~v~~~~~~~~~P~~~dl~~~~~~g~~la~~~ 147 (159)
T 3fni_A 77 LSTILGS-----VNEKQAVGIFE----TGGGDDEPIDPLLSKFRNLGLTTAFPAIRIKQTPTENTYKLCEEAGTDLGQWV 147 (159)
T ss_dssp HHHHHHH-----CCTTSEEEEEC----CSSSCBCCHHHHHHHHHHTTCEESSSCBCCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhh-----cccCCEEEEEE----cCCCCcHHHHHHHHHHHHCCCEEecCceEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 9888754 37899999999 46788989999999999999999876544332 2223345667777777766
Q ss_pred Hh
Q 007567 261 DN 262 (598)
Q Consensus 261 ~~ 262 (598)
..
T Consensus 148 ~~ 149 (159)
T 3fni_A 148 TR 149 (159)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 29
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=99.67 E-value=4.6e-16 Score=161.44 Aligned_cols=160 Identities=21% Similarity=0.273 Sum_probs=120.5
Q ss_pred cCCCCCeeeEEeeeecccCCCCCCc---------eeEEEEeecCCCCccCCCCeeEEecCCCHHHHHHHHHHcCCCCCcE
Q 007567 310 YDAQHPCRSNVAVRKELHTPSSDRS---------CTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTY 380 (598)
Q Consensus 310 ~d~~~p~~a~v~~~~eL~~~~s~rs---------~~hie~di~~~~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl~~d~~ 380 (598)
|....|+.++|+.+++|+..+++++ ++|++|+.++..+.|+||+++.|++.|....
T Consensus 16 ~~~~~~~~~~V~~~~~lt~~~~~~~~~~~e~~~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~--------------- 80 (314)
T 2rc5_A 16 FKKSNPYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPE--------------- 80 (314)
T ss_dssp BBTTBCEEEEEEEEEECSCCTTSSSCCSSSCCCCEEEEEEECCTTTCCCCTTCEEEEECSSBCHH---------------
T ss_pred CCCCCCEEEEEEEeEEcCCccccccccccccCceEEEEEEeCCCCcCcccCCCEEEEECCCCccc---------------
Confidence 4456788999999999997656666 9999999876568999999999998774210
Q ss_pred EEEecCCCCCCCCCCCCCCCCCCcccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCccCHHHHHHHHHH
Q 007567 381 FSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVA 460 (598)
Q Consensus 381 ~~i~~~~~~~~~~~~~~~~~pfpp~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~~gk~~y~~~i~~ 460 (598)
|. |. .+
T Consensus 81 ---------g~------------~~--------------------------------------~~--------------- 86 (314)
T 2rc5_A 81 ---------KK------------AK--------------------------------------GL--------------- 86 (314)
T ss_dssp ---------HH------------HT--------------------------------------TC---------------
T ss_pred ---------cC------------cc--------------------------------------ch---------------
Confidence 00 00 00
Q ss_pred cCCCHHHHHhhCCCCCCChhhhHhhhcCCCCCcccccCCCCCC---CCCeEEEEEEEEEeeCCCCCc-ccCcchHHhhcc
Q 007567 461 SQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTPTGRV-HKGLCSTWMKNS 536 (598)
Q Consensus 461 ~~~sl~dvL~~fps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~---~~~~i~itv~~v~~~~~~g~~-~~G~~S~~L~~~ 536 (598)
.+| | +++|.|||+|+|.. .++.++|+|+++.+.+..|+. +.|.||+||.++
T Consensus 87 ---------~~~---------------~-~~~R~ySi~s~p~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~l 141 (314)
T 2rc5_A 87 ---------ADV---------------G-YTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDL 141 (314)
T ss_dssp ---------SCC---------------B-CCCEEEECCSCTTCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHTC
T ss_pred ---------hhc---------------C-CCceeeeccCCccccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhcC
Confidence 011 1 57899999999862 357899999988666666654 579999999997
Q ss_pred CCCCCCCCCceEEEEEeCCCcc-CCC-CCCCcEEEEeCCCChHhHHHHHHHHhhc
Q 007567 537 LPMEKSNDCSWAPIFVRQSNFK-LPA-DAKVPIIMIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 537 ~~~~~~~~~~~~~i~v~~s~F~-lp~-~~~~PiImIg~GTGiAPfr~flqer~~~ 589 (598)
.++ +.+.|..+.++|. +|. +...|+||||+|||||||++||+++...
T Consensus 142 ~~G------d~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~l~~~ 190 (314)
T 2rc5_A 142 KPG------DEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEH 190 (314)
T ss_dssp CTT------CEEEEEEEECSSSCCCSSCBCSCEEEEEEGGGGHHHHHHHHHHHTT
T ss_pred CCc------CEEEEEeccCCceeCCCCCCCCCEEEEECCccHHHHHHHHHHHHHh
Confidence 665 3577777778765 565 4578999999999999999999998765
No 30
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=99.67 E-value=4.8e-16 Score=161.29 Aligned_cols=153 Identities=21% Similarity=0.347 Sum_probs=123.4
Q ss_pred ccCCCCCeeeEEeeeecccCCCCCCceeEEEEeecCCCCccCCCCeeEEecCCCHHHHHHHHHHcCCCCCcEEEEecCCC
Q 007567 309 VYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKE 388 (598)
Q Consensus 309 ~~d~~~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl~~d~~~~i~~~~~ 388 (598)
.|+...|+.++|+.+++++..+....++|++|+.+ ..+.|+||.|+.|.++... .
T Consensus 27 ~~~p~~~~~~~V~~~~~l~~~~~~~~v~~l~l~~~-~~~~~~pGQ~v~l~~~~~~------------------------~ 81 (310)
T 3vo2_A 27 KYKPKEPYVGRCLSNTRITGDDAPGETWHMVFSTE-GEIPYREGQSIGIIADGED------------------------K 81 (310)
T ss_dssp SBBTTBCEEEEEEEEEECSCSSSSSCEEEEEEECT-TCCCCCTTCEEEEECSSBC------------------------T
T ss_pred eecCCCCEEEEEEEEEEccCCCCCccEEEEEEeCC-CCCcccCCCEEEEECCCcC------------------------C
Confidence 46678899999999999987666778999999965 4789999999999765210 0
Q ss_pred CCCCCCCCCCCCCCCcccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCccCHHHHHHHHHHcCCCHHHH
Q 007567 389 DGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEV 468 (598)
Q Consensus 389 ~~~~~~~~~~~~pfpp~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~~gk~~y~~~i~~~~~sl~dv 468 (598)
.|
T Consensus 82 ------------------------------------------------------------~g------------------ 83 (310)
T 3vo2_A 82 ------------------------------------------------------------NG------------------ 83 (310)
T ss_dssp ------------------------------------------------------------TS------------------
T ss_pred ------------------------------------------------------------CC------------------
Confidence 00
Q ss_pred HhhCCCCCCChhhhHhhhcCCCCCcccccCCCCCC---CCCeEEEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCC
Q 007567 469 MSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDC 545 (598)
Q Consensus 469 L~~fps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~---~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~ 545 (598)
-++++|.|||+|+|.. .++.++|+|+++.+++..|+.+.|.||+||+++.+++
T Consensus 84 -------------------~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~G~~S~~L~~l~~Gd----- 139 (310)
T 3vo2_A 84 -------------------KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGA----- 139 (310)
T ss_dssp -------------------CBCCCEEEECCSCTTTTTTSSSEEEEEEECCEEECTTSCEEECHHHHHHHTCCTTC-----
T ss_pred -------------------CcCcceeeecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCcchhhHHhcCCCCC-----
Confidence 1135799999999974 4679999999888888888888999999999977653
Q ss_pred ceEEEEEeCCCcc-CCCCCCCcEEEEeCCCChHhHHHHHHHHhhc
Q 007567 546 SWAPIFVRQSNFK-LPADAKVPIIMIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 546 ~~~~i~v~~s~F~-lp~~~~~PiImIg~GTGiAPfr~flqer~~~ 589 (598)
.+.|..+.++|. +|.+...|+||||+|||||||++||+++...
T Consensus 140 -~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~ 183 (310)
T 3vo2_A 140 -DVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLE 183 (310)
T ss_dssp -EEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSS
T ss_pred -EEEEEeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHh
Confidence 577777778754 6766779999999999999999999998754
No 31
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=99.67 E-value=8.1e-16 Score=139.36 Aligned_cols=132 Identities=17% Similarity=0.233 Sum_probs=106.1
Q ss_pred EEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcch-HHHHHHHH
Q 007567 107 VTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTD-NAARFYKW 185 (598)
Q Consensus 107 v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppd-na~~F~~~ 185 (598)
++|+|+|+||||+++|+.|++.+.+.+ ..++++++++++. +++.+++.+||++|||+.|.+|+ +++.|+++
T Consensus 2 i~iiy~S~tGnT~~~a~~i~~~l~~~g--~~v~~~~~~~~~~------~~l~~~d~vi~g~p~y~~~~~~~~~~~~fl~~ 73 (137)
T 2fz5_A 2 VEIVYWSGTGNTEAMANEIEAAVKAAG--ADVESVRFEDTNV------DDVASKDVILLGCPAMGSEELEDSVVEPFFTD 73 (137)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHHTT--CCEEEEETTSCCH------HHHHTCSEEEEECCCBTTTBCCHHHHHHHHHH
T ss_pred EEEEEECCCChHHHHHHHHHHHHHhCC--CeEEEEEcccCCH------HHHhcCCEEEEEccccCCCCCCHHHHHHHHHH
Confidence 789999999999999999999998765 4578899988763 45788999999999999998888 49999999
Q ss_pred HHhhcCCCcccCCceEEEEeecCCcchh-HhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHHHHHH
Q 007567 186 FTEQKEGGEWLQKLKYGVFGLGNRQYEH-FNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVW 257 (598)
Q Consensus 186 L~~~~~~~~~l~~~~yaVFGLGds~Y~~-Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~ 257 (598)
+.. .++++++++||. |.+ ||.+.+.+++.|+.+|++.+ +....+...+..+.+.+|.+++.
T Consensus 74 l~~------~l~~k~~~~~~t----~g~~~~~~~~~l~~~l~~~g~~~~-~~~~~~g~~~~~~~~~~~~~~l~ 135 (137)
T 2fz5_A 74 LAP------KLKGKKVGLFGS----YGWGSGEWMDAWKQRTEDTGATVI-GTAIVNEMPDNAPECKELGEAAA 135 (137)
T ss_dssp HGG------GCSSCEEEEEEE----ESSCCSHHHHHHHHHHHHTTCEEE-EEEEEESSSSSCTHHHHHHHHHH
T ss_pred hhh------hcCCCEEEEEEe----cCCCCchHHHHHHHHHHHCCCEEc-CcEEEeeCCChHHHHHHHHHHHh
Confidence 863 488999999995 443 78999999999999999988 33222211111566777776653
No 32
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=99.65 E-value=9.1e-16 Score=165.15 Aligned_cols=155 Identities=25% Similarity=0.369 Sum_probs=123.3
Q ss_pred ccCCCCCeeeEEeeeecccCCCCCCceeEEEEeecCCCCccCCCCeeEEecCCCHHHHHHHHHHcCCCCCcEEEEecCCC
Q 007567 309 VYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKE 388 (598)
Q Consensus 309 ~~d~~~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~~l~Y~~GD~l~V~P~N~~~~Ve~~l~~Lgl~~d~~~~i~~~~~ 388 (598)
.|....|+.++|+.+++++...++++++|++|++++..+.|+||+|+.|++.+.. .
T Consensus 116 ~~~~~~~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~------------------------~ 171 (402)
T 2b5o_A 116 IYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGED------------------------K 171 (402)
T ss_dssp SSCSSSCEEEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEE------------------------T
T ss_pred cccCCCCEEEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCC------------------------c
Confidence 3566788999999999999777788999999998765689999999999876521 0
Q ss_pred CCCCCCCCCCCCCCCcccHHHHHHhccccCCCccHHHHHHHHHhCCChhHHHHHHHhcCccCHHHHHHHHHHcCCCHHHH
Q 007567 389 DGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEV 468 (598)
Q Consensus 389 ~~~~~~~~~~~~pfpp~Tl~~~L~~y~DL~~~p~k~~l~~La~~a~d~~ek~~L~~Las~~gk~~y~~~i~~~~~sl~dv 468 (598)
.|
T Consensus 172 ------------------------------------------------------------~g------------------ 173 (402)
T 2b5o_A 172 ------------------------------------------------------------NG------------------ 173 (402)
T ss_dssp ------------------------------------------------------------TT------------------
T ss_pred ------------------------------------------------------------CC------------------
Confidence 00
Q ss_pred HhhCCCCCCChhhhHhhhcCCCCCcccccCCCCCC---CCCeEEEEEEEEEeeCC-CCCcccCcchHHhhccCCC-CCCC
Q 007567 469 MSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTP-TGRVHKGLCSTWMKNSLPM-EKSN 543 (598)
Q Consensus 469 L~~fps~~~pl~~ll~~i~p~l~pR~YSIsSsp~~---~~~~i~itv~~v~~~~~-~g~~~~G~~S~~L~~~~~~-~~~~ 543 (598)
.++++|.|||+|+|.. .++.++|+|+++.|.++ .|+.+.|.||+||+++.++ +
T Consensus 174 -------------------~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~G~d--- 231 (402)
T 2b5o_A 174 -------------------KPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTD--- 231 (402)
T ss_dssp -------------------EECCCEEEEBCSCTTTTTTSSCEEEEEEECCEEECTTTCCEEECHHHHHHHTCCTTCC---
T ss_pred -------------------CccCceeeeccCCCccccCCCCEEEEEEEEeeecccccCcCCCCchhHHHhhCCCCCc---
Confidence 0136799999999964 25799999998766653 3566789999999997765 4
Q ss_pred CCceEEEEEeCCCc-cCCCCCCCcEEEEeCCCChHhHHHHHHHHhhcc
Q 007567 544 DCSWAPIFVRQSNF-KLPADAKVPIIMIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 544 ~~~~~~i~v~~s~F-~lp~~~~~PiImIg~GTGiAPfr~flqer~~~~ 590 (598)
.+.|..+.++| .+|.+...|+||||+|||||||++||+++...+
T Consensus 232 ---~v~v~gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~~~~ 276 (402)
T 2b5o_A 232 ---DVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQ 276 (402)
T ss_dssp ---CEEEEEEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTCC
T ss_pred ---eEEEEcccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHHHHhc
Confidence 46677777875 577666799999999999999999999987653
No 33
>1rlj_A NRDI protein; flavoprotein, FMN, thioredoxin, alpha/beta/alpha sandwich, structural genomics, PSI, protein structure initiative; HET: FMN; 2.00A {Bacillus subtilis} SCOP: c.23.5.7
Probab=99.65 E-value=1.2e-16 Score=147.45 Aligned_cols=121 Identities=18% Similarity=0.183 Sum_probs=87.8
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFY 183 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~ 183 (598)
++++.|+|+|+||||+.+|++|++++ .+++.+ .+..++.+|+++||||+|++|+++.+|+
T Consensus 8 ~m~i~I~Y~S~TGNt~~vA~~l~~~~----------~~~i~~----------~~~~~~~~ilv~pTyG~G~~P~~v~~Fl 67 (139)
T 1rlj_A 8 NAMVQIIFDSKTGNVQRFVNKTGFQQ----------IRKVDE----------MDHVDTPFVLVTYTTNFGQVPASTQSFL 67 (139)
T ss_dssp HSCCEEEECCSSSHHHHHHTTSCCSE----------EEETTS----------CSCCCSCEEEEECCBGGGBCCHHHHHHH
T ss_pred CCEEEEEEECCChhHHHHHHHhcccc----------ceEecc----------ccccCCCEEEEEcCcCCCcCcHHHHHHH
Confidence 35679999999999999999986420 223432 1344567899999999999999999888
Q ss_pred HHHHhhcCCCcccCCceEEEEeecCCcc-hhHhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHHHHHHH
Q 007567 184 KWFTEQKEGGEWLQKLKYGVFGLGNRQY-EHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWP 258 (598)
Q Consensus 184 ~~L~~~~~~~~~l~~~~yaVFGLGds~Y-~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~ 258 (598)
+. .+++.|+|+|+||++| +.||.+++.+++++ |...+. .-+.+-.....+.+.+|.+++|.
T Consensus 68 ~~----------~~~~~~~V~g~Gd~~yg~~f~~a~~~i~~~~---~~~~~~-~~el~g~~~D~~~~~~~~~~~~~ 129 (139)
T 1rlj_A 68 EK----------YAHLLLGVAASGNKVWGDNFAKSADTISRQY---QVPILH-KFELSGTSKDVELFTQEVERVVT 129 (139)
T ss_dssp HH----------HGGGEEEEEEEECGGGGGGTTHHHHHHHHHH---TCCEEE-EEETTCCHHHHHHHHHHHHHHHH
T ss_pred Hh----------CCCCEEEEEecCCCcHHHHHHHHHHHHHHHc---CCCCcc-eEEEcCCHHHHHHHHHHHHHHHH
Confidence 42 1247899999999999 78999999998776 443332 21222112234568899988885
No 34
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.40 E-value=1.2e-12 Score=139.36 Aligned_cols=119 Identities=16% Similarity=0.081 Sum_probs=100.1
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFY 183 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~ 183 (598)
.++++|+|+|+||||+++|+.+++.+.+.+ ..++++++.+.+.. ++.+++.+++.+||++|||+.|.+| .++.|+
T Consensus 251 ~~~i~i~y~S~~GnT~~lA~~ia~~l~~~g--~~v~~~~~~~~~~~--~~~~~~~~~d~ii~g~p~y~~~~~~-~~~~~l 325 (398)
T 1ycg_A 251 KAKAVIAYDTMWLSTEKMAHALMDGLVAGG--CEVKLFKLSVSDRN--DVIKEILDARAVLVGSPTINNDILP-VVSPLL 325 (398)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTT--CEEEEEEGGGSCHH--HHHHHHHHCSEEEEECCCBTTBCCG-GGHHHH
T ss_pred cCeEEEEEECCccHHHHHHHHHHHHHHhcC--CeEEEEECCCCCHH--HHHHHHHHCCEEEEECCccCccchH-HHHHHH
Confidence 578999999999999999999999998765 46788888776542 2334567899999999999877777 599999
Q ss_pred HHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecc
Q 007567 184 KWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPV 236 (598)
Q Consensus 184 ~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~ 236 (598)
++|... .++++++++||. |.+||.+.+.+++.|..+|++.+.+.
T Consensus 326 ~~l~~~-----~~~~k~~~~~~s----~g~~~~a~~~l~~~l~~~g~~~~~~~ 369 (398)
T 1ycg_A 326 DDLVGL-----RPKNKVGLAFGA----YGWGGGAQKILEERLKAAKIELIAEP 369 (398)
T ss_dssp HHHHHH-----CCSSCEEEEEEE----ESSSCCHHHHHHHHHHHTTCEESCSS
T ss_pred HHHhcc-----ccCCCEEEEEEe----CCCchHHHHHHHHHHHHCCeEEecCc
Confidence 998753 478999999994 77899999999999999999998753
No 35
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.40 E-value=2.3e-12 Score=137.30 Aligned_cols=145 Identities=17% Similarity=0.156 Sum_probs=113.8
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFY 183 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~ 183 (598)
.++++|+|+|+||||+++|+.|++.+.+.+ ..++++++.+.+.+ ++.+++.+++.+||++||||.|.+| .++.|+
T Consensus 252 ~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g--~~v~~~~~~~~~~~--~~~~~~~~~d~ii~gsp~~~~~~~~-~~~~~l 326 (402)
T 1e5d_A 252 TNKVVIFYDSMWHSTEKMARVLAESFRDEG--CTVKLMWCKACHHS--QIMSEISDAGAVIVGSPTHNNGILP-YVAGTL 326 (402)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTT--CEEEEEETTTSCHH--HHHHHHHTCSEEEEECCCBTTBCCH-HHHHHH
T ss_pred CCcEEEEEECCChhHHHHHHHHHHHHHhCC--CeEEEEECCCCCHH--HHHHHHHHCCEEEEECCccCCCchH-HHHHHH
Confidence 589999999999999999999999998764 46788899876642 2335678999999999999877766 699999
Q ss_pred HHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccC--CCCchHHHHHHHHHHHHHHH
Q 007567 184 KWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD--DQCIEDDFSAWRELVWPELD 261 (598)
Q Consensus 184 ~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~--~~~~e~~f~~W~~~l~~~L~ 261 (598)
+++... .++++++++||. |.+||.+.+.+.+.|..+|++.+.+....+. +....+.+.+|.+++...++
T Consensus 327 ~~l~~~-----~l~~k~~~~f~t----~g~~~~a~~~l~~~l~~~G~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~ 397 (402)
T 1e5d_A 327 QYIKGL-----RPQNKIGGAFGS----FGWSGESTKVLAEWLTGMGFDMPATPVKVKNVPTHADYEQLKTMAQTIARALK 397 (402)
T ss_dssp HHHHHT-----CCCSCEEEEEEE----ESSSCHHHHHHHHHHHHTTCBCCSCCEEEESSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhc-----ccCCCEEEEEEc----CCCccHHHHHHHHHHHHCCCEEecCceEEeeCCCHHHHHHHHHHHHHHHHHHh
Confidence 998753 478999999994 7788999999999999999998864333222 22234456678777776665
Q ss_pred h
Q 007567 262 N 262 (598)
Q Consensus 262 ~ 262 (598)
+
T Consensus 398 ~ 398 (402)
T 1e5d_A 398 A 398 (402)
T ss_dssp H
T ss_pred h
Confidence 4
No 36
>3n3a_C Protein NRDI; ribonucleotide reductase, four-helix bundle, dimanganese CLU flavoprotein, oxidoreductase; HET: FMN; 1.99A {Escherichia coli} PDB: 3n39_C* 3n3b_C*
Probab=99.37 E-value=2.8e-12 Score=119.02 Aligned_cols=98 Identities=17% Similarity=0.411 Sum_probs=74.3
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCC----CCCcchHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYG----DGEPTDNA 179 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG----~Geppdna 179 (598)
++..+|+|.|.||||+.|+++|... ..++ ++.+ . +.+..+..+|++++||| .|+.|+.+
T Consensus 20 ~~~~ivYfsS~TGNT~rFv~kL~~~--------~~~I-~~~~--~------~~~~~~ep~vlv~PTYg~g~~~G~vP~~v 82 (153)
T 3n3a_C 20 HMSQLVYFSSSSENTQRFIERLGLP--------AVRI-PLNE--R------ERIQVDEPYILIVPSYGGGGTAGAVPRQV 82 (153)
T ss_dssp ---CEEECCCTTCHHHHHHHHHCSC--------CEEC-CSST--T------CCCCCCSCEEEEEECCTTSSSSSSSCHHH
T ss_pred cceeEEEEECCCcCHHHHHHHhCCc--------cccc-cccc--C------cccccCCCEEEEEeccCCCCcCCcCcHHH
Confidence 4566899999999999999988431 1122 3321 1 12345678999999999 59999999
Q ss_pred HHHHHHHHhhcCCCcccCCceEEEEeecCCcc-hhHhHHHHHHHHHHH
Q 007567 180 ARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQY-EHFNKIAKVVDEILA 226 (598)
Q Consensus 180 ~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y-~~Fn~~~k~ld~~L~ 226 (598)
.+|++.+.+ .++.++|+|.||++| +.||.+++.+.+++.
T Consensus 83 ~dFl~~~~n--------~~~~~gVigsGN~nfg~~Fc~A~d~ia~k~~ 122 (153)
T 3n3a_C 83 IRFLNDEHN--------RALLRGVIASGNRNFGEAYGRAGDVIARKCG 122 (153)
T ss_dssp HHHHTSHHH--------HHHEEEEEEEECGGGGGGTTHHHHHHHHHHT
T ss_pred HHHHhhhcc--------cCcEEEEEecCCCchhHHHHHHHHHHHHHhC
Confidence 999876543 256799999999998 899999999999986
No 37
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=99.36 E-value=1.4e-11 Score=118.23 Aligned_cols=149 Identities=15% Similarity=0.090 Sum_probs=110.6
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHh-hcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARA-RYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARF 182 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~-~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F 182 (598)
|++|+|+|+|.||||+.+|+.|++.+.+ .+ ..++++|+.+.+. +++.+++.+||++||| .|.+|..++.|
T Consensus 4 M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g--~~v~~~~l~~~~~------~~l~~aD~ii~gsP~y-~g~~~~~lk~f 74 (188)
T 2ark_A 4 MGKVLVIYDTRTGNTKKMAELVAEGARSLEG--TEVRLKHVDEATK------EDVLWADGLAVGSPTN-MGLVSWKMKRF 74 (188)
T ss_dssp CEEEEEEECCSSSHHHHHHHHHHHHHHTSTT--EEEEEEETTTCCH------HHHHHCSEEEEEEECB-TTBCCHHHHHH
T ss_pred CCEEEEEEECCCcHHHHHHHHHHHHHhhcCC--CeEEEEEhhhCCH------HHHHhCCEEEEEeCcc-CCcCCHHHHHH
Confidence 6799999999999999999999999986 54 5678999988763 4678899999999999 89999999999
Q ss_pred HHHHHhhcCCCcccCCceEEEEee-cCCcchhHhHHHHHHHHHHHhcCCeEeec------c-----e---eccCC-CCch
Q 007567 183 YKWFTEQKEGGEWLQKLKYGVFGL-GNRQYEHFNKIAKVVDEILANQGAKRLVP------V-----G---LGDDD-QCIE 246 (598)
Q Consensus 183 ~~~L~~~~~~~~~l~~~~yaVFGL-Gds~Y~~Fn~~~k~ld~~L~~lGA~ri~~------~-----g---~gD~~-~~~e 246 (598)
++++.... ...++++++++||. |+.. ..+....+.+.+.|..+|+..+.. . | .+.-+ ....
T Consensus 75 ld~~~~~~--~~~l~gk~~~~~~t~g~~~-g~~~~~l~~l~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~ 151 (188)
T 2ark_A 75 FDDVLGDL--WGEIDGKIACAFSSSGGWG-GGNEVACMSILTMLMNFGFLVFGVTDYVGKKFTLHYGAVVAGEPRSEEEK 151 (188)
T ss_dssp HHHTGGGT--TTSCTTCEEEEEEEESSBT-SSHHHHHHHHHHHHHHTTCEECCEEEEEETTEEESSSEEEESSCCSHHHH
T ss_pred HHHHhhhh--HHHhCCCeEEEEEECCCCC-CCHHHHHHHHHHHHHHCCcEEeCCCccccccccCCCcceeecCCCcHHHH
Confidence 99986411 12588999999998 5433 235566778888888889865531 1 1 11111 1123
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 007567 247 DDFSAWRELVWPELDNLL 264 (598)
Q Consensus 247 ~~f~~W~~~l~~~L~~~~ 264 (598)
+....|-+.|...+.++.
T Consensus 152 ~~~~~~g~~la~~~~~~~ 169 (188)
T 2ark_A 152 EACRRLGRRLAEWVAIFV 169 (188)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 445577777777776553
No 38
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.36 E-value=4.2e-12 Score=136.88 Aligned_cols=122 Identities=17% Similarity=0.111 Sum_probs=99.0
Q ss_pred CCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCc-chHHHHhhccCCeEEEEEecCCCCCcchHHHH
Q 007567 103 GKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADE-EDEYEEKLKKENIVFFFLATYGDGEPTDNAAR 181 (598)
Q Consensus 103 ~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~-~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~ 181 (598)
..++|+|+|+|++||||++|+.|++.+.++| ..+.++++.+.... ..++.+++.+++.+||++|||+ |++++.++.
T Consensus 264 ~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~G--v~~~~~~~~d~~~~~~s~i~~~i~~~~~ivlGspT~~-~~~~p~~~~ 340 (410)
T 4dik_A 264 KKGKVTVIYDSMYGFVENVMKKAIDSLKEKG--FTPVVYKFSDEERPAISEILKDIPDSEALIFGVSTYE-AEIHPLMRF 340 (410)
T ss_dssp CTTEEEEEEECSSSHHHHHHHHHHHHHHHTT--CEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEECCTT-SSSCHHHHH
T ss_pred cccceeeEEecccChHHHHHHHHHHHHHhcC--CceEEEEeccCCCCCHHHHHHHHHhCCeEEEEeCCcC-CcCCHHHHH
Confidence 4568999999999999999999999999887 33444444333322 2334567788999999999995 778888999
Q ss_pred HHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecc
Q 007567 182 FYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPV 236 (598)
Q Consensus 182 F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~ 236 (598)
|+..|... .++|++.++|| +|.|.+.+.+.+.++|+++|++.+.+.
T Consensus 341 ~l~~l~~~-----~~~~K~~~~FG----SyGWsg~a~~~~~~~l~~~~~~~v~~~ 386 (410)
T 4dik_A 341 TLLEIIDK-----ANYEKPVLVFG----VHGWAPSAERTAGELLKETKFRILSFT 386 (410)
T ss_dssp HHHHHHHH-----CCCCCEEEEEE----ECCCCCTTSCCHHHHHTTSSCEEEEEE
T ss_pred HHHHHHhc-----ccCCCEEEEEE----CCCCCcHHHHHHHHHHHHCCCEEECcE
Confidence 99988764 47899999999 688999999999999999999876544
No 39
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=99.36 E-value=9.6e-13 Score=136.21 Aligned_cols=95 Identities=28% Similarity=0.340 Sum_probs=73.7
Q ss_pred CCCcccccCCCCCC---CCCeEEEEEEEEEe-eCCCC---CcccCcchHHhhccCCCCCCCCCceEEEEEeCCCccCCC-
Q 007567 490 LQPRYYSISSSPRV---APSRIHVTCALVYE-KTPTG---RVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPA- 561 (598)
Q Consensus 490 l~pR~YSIsSsp~~---~~~~i~itv~~v~~-~~~~g---~~~~G~~S~~L~~~~~~~~~~~~~~~~i~v~~s~F~lp~- 561 (598)
+++|.|||+|+|.. .++.++|+|+++.+ .+..| +.+.|.||+||+++.++ +.+.|..+.|.|.+..
T Consensus 83 ~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~~~~~G~~S~~L~~l~~G------d~v~v~gP~G~~~~~~~ 156 (311)
T 3lo8_A 83 QNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPG------DKIQLTGPSGKIMLLPE 156 (311)
T ss_dssp CCCEEEEBCSCTTTTTTSSSEEEEEEECCCCCCTTTCCCCGGGSCHHHHHHHTCCTT------CEEEEEEEECCTTCCCC
T ss_pred CCceeeEecCCCcccCCCCCEEEEEEEEEEecccccCcCCcCCCCchhhHHhcCCCc------CEEEEEeccCCcccCCC
Confidence 46899999999975 35799999987633 33322 24789999999997665 3577777788876433
Q ss_pred -CCCCcEEEEeCCCChHhHHHHHHHHhhcc
Q 007567 562 -DAKVPIIMIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 562 -~~~~PiImIg~GTGiAPfr~flqer~~~~ 590 (598)
+...|+||||+|||||||++||+++...+
T Consensus 157 ~~~~~~~vlIagGtGIaP~~s~l~~~~~~~ 186 (311)
T 3lo8_A 157 EDPNATHIMIATGTGVAPFRGYLRRMFMED 186 (311)
T ss_dssp SCTTCEEEEEEEGGGGHHHHHHHHHHHTEE
T ss_pred cCCCCCEEEEECCEEHHHHHHHHHHHHHhc
Confidence 35789999999999999999999987643
No 40
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=99.34 E-value=2e-11 Score=117.51 Aligned_cols=128 Identities=13% Similarity=-0.013 Sum_probs=102.0
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcch-------------HHHHhhccCCeEEEEEecC
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEED-------------EYEEKLKKENIVFFFLATY 170 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~-------------~~~~~l~~~~~vIf~~sTy 170 (598)
+++|+|+|+|.+|||+.+|+.+++.+.+.+ ..++++|+.++..... ...+++.+.+.+||++|||
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g--~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y 82 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGG--FEARVRTVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTR 82 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTT--CEEEEEBCCCEEC-------------CCBCCHHHHHTCSEEEEEEECB
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCC--CEEEEEEhhhccchhhhhccccccccCchhhHHHHHHCCEEEEEcChh
Confidence 468999999999999999999999998765 5678889877411000 0135678899999999999
Q ss_pred CCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeec
Q 007567 171 GDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVP 235 (598)
Q Consensus 171 G~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~ 235 (598)
.|.+|..++.|++++..... ...++++++++|+.+...+..++.+.+.+.+.|..+|++.+.+
T Consensus 83 -~~~~~~~lk~~ld~~~~~~~-~~~l~~K~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~~~~ 145 (200)
T 2a5l_A 83 -FGNMASPLKYFLDGTSSLWL-TGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLGI 145 (200)
T ss_dssp -TTBCCHHHHHHHHTCHHHHH-HTTTTTCEEEEEEEBSCSSCCHHHHHHHHHHHHHHTTCEECCC
T ss_pred -ccCccHHHHHHHHHHHHHhh-ccccCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHCCCEEECC
Confidence 69999999999998864210 1248899999999988777666788899999999999987754
No 41
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.28 E-value=2e-11 Score=130.09 Aligned_cols=148 Identities=16% Similarity=0.111 Sum_probs=111.2
Q ss_pred cCCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHH
Q 007567 102 DGKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAAR 181 (598)
Q Consensus 102 ~~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~ 181 (598)
+..++++|+|+|+||||+++|+.|++.+.+.+ ..++++++.+++.+ ++..++.+++.+||++|||+ |.+|..++.
T Consensus 254 ~~~~k~~i~~~S~~gnT~~la~~i~~~l~~~g--~~v~~~~~~~~~~~--~~~~~l~~~d~iiigsP~y~-~~~~~~~k~ 328 (404)
T 2ohh_A 254 MVDERVTVIYDTMHGSTRKMAHAIAEGAMSEG--VDVRVYCLHEDDRS--EIVKDILESGAIALGAPTIY-DEPYPSVGD 328 (404)
T ss_dssp CCCSEEEEEECCSSSHHHHHHHHHHHHHHTTT--CEEEEEETTTSCHH--HHHHHHHTCSEEEEECCEET-TEECTHHHH
T ss_pred CCCCcEEEEEECCChHHHHHHHHHHHHHHhCC--CeEEEEECCCCCHH--HHHHHHHHCCEEEEECcccc-ccchHHHHH
Confidence 35689999999999999999999999998754 56788999887642 23456889999999999995 677777999
Q ss_pred HHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeeccee-ccCCCCchHHHHHHHHHHHHHH
Q 007567 182 FYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL-GDDDQCIEDDFSAWRELVWPEL 260 (598)
Q Consensus 182 F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~-gD~~~~~e~~f~~W~~~l~~~L 260 (598)
|++|+..... .. ++++++++||.|... +.+.+.+.+.|..+|++.+.+... +..+....+...+|.+++...+
T Consensus 329 ~ld~l~~~~~-~~-l~~k~~~~~~~~g~~----~~a~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (404)
T 2ohh_A 329 LLMYLRGLKF-NR-TLTRKALVFGSMGGN----GGATGTMKELLAEAGFDVACEEEVYYVPTGDELDACFEAGRKLAAEI 402 (404)
T ss_dssp HHHHHHHHCG-GG-TCCEEEEEEEEESSS----CCHHHHHHHHHHHTTEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhccc-cc-cCCCEEEEEEecCCC----ChhHHHHHHHHHHCCCEEEeEEEEeeCCCHHHHHHHHHHHHHHHHHH
Confidence 9999975321 12 689999999976543 667889999999999998876321 1112223345566666665443
No 42
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.27 E-value=3.8e-11 Score=128.69 Aligned_cols=146 Identities=14% Similarity=-0.002 Sum_probs=110.1
Q ss_pred CCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHH
Q 007567 103 GKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARF 182 (598)
Q Consensus 103 ~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F 182 (598)
.+++|+|+|+|.||||+++|+.|++.+.+.+ ..++++++.+.+.. +..+++.+++.+||++||| .|.+|..++.|
T Consensus 255 ~~~kv~iiy~S~~GnT~~la~~i~~~l~~~g--~~v~~~~l~~~~~~--~~~~~l~~~D~iiigsP~y-~~~~~~~~k~f 329 (414)
T 2q9u_A 255 CQKKVTVVLDSMYGTTHRMALALLDGARSTG--CETVLLEMTSSDIT--KVALHTYDSGAVAFASPTL-NNTMMPSVAAA 329 (414)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHHHHTT--CEEEEEEGGGCCHH--HHHHHHHTCSEEEEECCCB-TTBCCHHHHHH
T ss_pred cCCeEEEEEECCCchHHHHHHHHHHHHHhCC--CeEEEEEcCcCCHH--HHHHHHHhCCEEEEEcCcc-CcCchHHHHHH
Confidence 3689999999999999999999999998764 46788898877642 2234688999999999999 56666669999
Q ss_pred HHHHHhhcCCCccc-CCceEEEEeecCCcchhHhHHHHHHHHHHHh-cCCeEeecc-ee--ccCCCCchHHHHHHHHHHH
Q 007567 183 YKWFTEQKEGGEWL-QKLKYGVFGLGNRQYEHFNKIAKVVDEILAN-QGAKRLVPV-GL--GDDDQCIEDDFSAWRELVW 257 (598)
Q Consensus 183 ~~~L~~~~~~~~~l-~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~-lGA~ri~~~-g~--gD~~~~~e~~f~~W~~~l~ 257 (598)
++++... .+ +++++++||.|.. .+.+.+.+.+.|.. +|++.+.+. .. +.-+....+...+|.+++.
T Consensus 330 ld~l~~~-----~~~~~K~~~~~~t~g~----~~~a~~~l~~~l~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~g~~l~ 400 (414)
T 2q9u_A 330 LNYVRGL-----TLIKGKPAFAFGAFGW----SNRAVPDIVAELRDGCKADVYDEKGITFKFNYTEELLEQAYNAGVDLG 400 (414)
T ss_dssp HHHHHHH-----TTTTTSBEEEEEEESS----SCCHHHHHHHHHHHTSCCBCCCSSCEEEESCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhh-----cccCCCEEEEEEecCC----CchhHHHHHHHHHhhcCcEEccCccEEEeeCCCHHHHHHHHHHHHHHH
Confidence 9999753 36 8999999997654 36678899999999 999987653 22 2212222345666766666
Q ss_pred HHHHh
Q 007567 258 PELDN 262 (598)
Q Consensus 258 ~~L~~ 262 (598)
..+.+
T Consensus 401 ~~~~~ 405 (414)
T 2q9u_A 401 KRAIA 405 (414)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 43
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=99.24 E-value=9.7e-11 Score=112.52 Aligned_cols=125 Identities=17% Similarity=0.101 Sum_probs=97.9
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHh-hcCCceeEEEcCCCCCCcc--------------hHHHHhhccCCeEEEEEe
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARA-RYDKAIFKVVDIDDYADEE--------------DEYEEKLKKENIVFFFLA 168 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~-~~~~~~~~v~dl~~~~~~~--------------~~~~~~l~~~~~vIf~~s 168 (598)
|++|+|+|+|.+|||+.+|+.+++.+.+ .+ ..++++|+.++.... .+ .+++.+.+.+||++|
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g--~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~aD~ii~gsP 77 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDG--AEVVVKRVPETMPPQLFEKAGGKTQTAPVAT-PQELADYDAIIFGTP 77 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTT--CEEEEEECCCCSCHHHHHHTTCCCCCSCBCC-GGGGGGCSEEEEEEE
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCC--CEEEEEEccccCchhhhhhcccccccCchhh-HHHHHHCCEEEEEeC
Confidence 4689999999999999999999999987 54 567889998752110 00 246788999999999
Q ss_pred cCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEee
Q 007567 169 TYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 234 (598)
Q Consensus 169 TyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~ 234 (598)
|| .|.+|..++.|++++..... ...++++++++|+.+... .....+.+.+...|..+|+..+.
T Consensus 78 ~y-~~~~~~~lk~~ld~~~~~~~-~~~l~~K~~~~~~t~g~~-g~~~~~l~~l~~~l~~~g~~~v~ 140 (198)
T 3b6i_A 78 TR-FGNMSGQMRTFLDQTGGLWA-SGALYGKLASVFSSTGTG-GGQEQTITSTWTTLAHHGMVIVP 140 (198)
T ss_dssp EE-TTEECHHHHHHHTTCHHHHH-HTTTTTCEEEEEEEESSS-TTHHHHHHHHHHHHHHTTCEECC
T ss_pred hh-cCCchHHHHHHHHHhhhhhh-hcccCCCEEEEEEeCCCC-ccHHHHHHHHHHHHHHCCcEEEC
Confidence 99 89999999999998764210 124889999999987655 44556778888899999988765
No 44
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=99.21 E-value=1.8e-10 Score=111.01 Aligned_cols=126 Identities=12% Similarity=0.013 Sum_probs=99.4
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCC-------------C--CcchHHHHhhccCCeEEEEEe
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDY-------------A--DEEDEYEEKLKKENIVFFFLA 168 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~-------------~--~~~~~~~~~l~~~~~vIf~~s 168 (598)
+++|+|+|+| +|||+.+|+.+++.+.+.+ ..++++|+.++ + ....+ .+++.+.+.+||++|
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g--~~v~~~~l~~~~~~~~~~~~~~~~~d~~~~~~-~~~l~~aD~ii~gsP 79 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAG--AEVKIRRVRETLPPEFQSRIPFDKVKDIPEVT-LDDMRWADGFAIGSP 79 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHS--CEEEEEECCCCSCGGGGTTCCGGGSTTSCBCC-HHHHHHCSEEEEEEE
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCC--CEEEEEehhHhCChhhhhccCCCccccccccc-HHHHHhCCEEEEECC
Confidence 5799999999 9999999999999998765 56788888775 0 00001 356788999999999
Q ss_pred cCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeec
Q 007567 169 TYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVP 235 (598)
Q Consensus 169 TyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~ 235 (598)
+| .|.+|..++.|++++..... ...++++++++|+.+...+.....+.+.+.+.|..+|+..+.+
T Consensus 80 ~y-~~~~~~~lk~~ld~~~~~~~-~~~l~gK~~~~~~t~g~~~~g~~~~~~~l~~~l~~~g~~~~~~ 144 (199)
T 2zki_A 80 TR-YGNMAGGLKTFLDTTAILWK-DNVLYGKPVTFFTEASTVHGGHETTILTMSTYAYHFGMIIVPI 144 (199)
T ss_dssp CB-TTBCCHHHHHHHHTTHHHHH-TTSSTTCEEEEEEEBSSTTSSSSHHHHHHTHHHHHHTCEECCC
T ss_pred cc-ccCccHHHHHHHHHhhhccc-ccccCCCEEEEEEeCCCCCCCHHHHHHHHHHHHHHCCeEEeCC
Confidence 99 69999999999998753210 1258899999999876665445677889999999999987654
No 45
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=99.19 E-value=1.4e-10 Score=111.83 Aligned_cols=122 Identities=16% Similarity=0.149 Sum_probs=95.6
Q ss_pred CCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCC-CCcchHHHHhhccCCeEEEEEecCCCCCcchHHHH
Q 007567 103 GKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDY-ADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAAR 181 (598)
Q Consensus 103 ~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~-~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~ 181 (598)
.+++|+|+|+|.||||+.+|+.|++.+.+. .+++.++ +..+ ...+++.+++.+||++||| .|.+|..++.
T Consensus 5 ~~~kiliiy~S~~GnT~~lA~~ia~~l~~~-------~~~v~~~~~~~~-~~~~~l~~~D~ii~gsP~y-~g~~~~~~k~ 75 (193)
T 3d7n_A 5 SSSNTVVVYHSGYGHTHRMAEAVAEGAEAT-------LHAIDAEGNLSE-DGWAALDAADAIIFGTPTY-MGGPSWQFKK 75 (193)
T ss_dssp -CCCEEEEECCSSSHHHHHHHHHHHHHTCE-------EEECCTTSCCCH-HHHHHHHHCSEEEEEEEEE-TTEECHHHHH
T ss_pred CCCEEEEEEECCChHHHHHHHHHHHHhhhc-------ceEeeecCCCCH-hHHHHHHHCCEEEEEeCcc-CCCccHHHHH
Confidence 467899999999999999999999998753 3445443 1111 1235788999999999999 5999999999
Q ss_pred HHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEee
Q 007567 182 FYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 234 (598)
Q Consensus 182 F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~ 234 (598)
|++++...-. ...++++++++|+.+...+..+..+...+...|..+|+.-+.
T Consensus 76 fld~~~~~~~-~~~l~gK~~~~f~s~g~~~g~~~~~l~~l~~~l~~~G~~~vg 127 (193)
T 3d7n_A 76 FADASSKPWF-SAKWQDKVFGGFTNSASLNGDKLNTLQYLVLLAGQHGGLWVS 127 (193)
T ss_dssp HHHHTHHHHH-TTTTTTCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEECC
T ss_pred HHHHhhhhcc-ccccCCCEEEEEEECCCCCCChHHHHHHHHHHHHHCCCEEeC
Confidence 9998863110 135889999999998877766778889999999999987643
No 46
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=99.18 E-value=2.4e-10 Score=111.33 Aligned_cols=128 Identities=16% Similarity=0.138 Sum_probs=102.2
Q ss_pred CCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCC--------------------CCcchHHHHhhccCCe
Q 007567 103 GKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDY--------------------ADEEDEYEEKLKKENI 162 (598)
Q Consensus 103 ~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~--------------------~~~~~~~~~~l~~~~~ 162 (598)
.+++|+|+|+|.+|||+.+|+.+++.+.+.+ ..++++|+.++ +.. ....+++.+.+.
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g--~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~l~~aD~ 81 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAG--AEVRLLKVRETAPQDVIDGQDAWKANIEAMKDVP-EATPADLEWAEA 81 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTT--CEEEEEECCCCSCHHHHTTCHHHHHHHHHTTTSC-BCCHHHHHHCSE
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCC--CEEEEEeccccccchhhhcccccccccccccchh-HHHHHHHHHCCE
Confidence 4679999999999999999999999998764 56788998875 210 112356788999
Q ss_pred EEEEEecCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeec
Q 007567 163 VFFFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVP 235 (598)
Q Consensus 163 vIf~~sTyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~ 235 (598)
+||++|+| .|.+|..++.|++++...-. ...++++++++|+.+...+..+..+...+...|..+|+..+.+
T Consensus 82 ii~gsP~y-~~~~~~~lk~~ld~~~~~~~-~~~l~gK~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~v~~ 152 (211)
T 1ydg_A 82 IVFSSPTR-FGGATSQMRAFIDTLGGLWS-SGKLANKTFSAMTSAQNVNGGQETTLQTLYMTAMHWGAVLTPP 152 (211)
T ss_dssp EEEEEEEE-TTEECHHHHHHHHTTHHHHH-TTTTTTCEEEEEEEESSTTSSTTHHHHHHHHHHHTTTCEECCC
T ss_pred EEEEcCcc-ccCccHHHHHHHHHhccccc-cccCCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHCCCEEeCC
Confidence 99999999 69999999999998753210 1258899999999877666555778889999999999887754
No 47
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.17 E-value=2.4e-11 Score=120.73 Aligned_cols=88 Identities=17% Similarity=0.301 Sum_probs=70.1
Q ss_pred CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhh-ccCCCCCCCCCceEEEEEeCCCccCCCCCCCcEE
Q 007567 490 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMK-NSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPII 568 (598)
Q Consensus 490 l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~-~~~~~~~~~~~~~~~i~v~~s~F~lp~~~~~PiI 568 (598)
+++|.|||+|+|.. +.++|+|+.+. .++...|.+|+||+ ++.++ +.+.|..+.++|.++ +...|+|
T Consensus 52 ~~~R~ySi~s~~~~--~~~~i~vk~~~----~~~~~~G~~S~~l~~~l~~G------~~v~v~gP~G~~~~~-~~~~~~v 118 (243)
T 4eh1_A 52 REIRQYSLSHASNG--REYRISVKREG----VGSDNPGLVSHYLHNNVKVG------DSVKLYAPAGDFFYV-ERERPVV 118 (243)
T ss_dssp CEEEEEEBCSCCCS--SCEEEEEECTT----TTSSSCCHHHHHHHHHCCTT------CEEEEEEEECSCCCC-CCSSCEE
T ss_pred ccceeeEeccCCCC--CeEEEEEEEee----cCCCCCCeehhHHHhcCCCC------CEEEEEccCcccCcC-CCCCCEE
Confidence 36799999999853 67888876431 13346799999997 46665 357777788999998 5678999
Q ss_pred EEeCCCChHhHHHHHHHHhhcc
Q 007567 569 MIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 569 mIg~GTGiAPfr~flqer~~~~ 590 (598)
|||+|||||||+++|+++...+
T Consensus 119 liagGtGitp~~~~l~~l~~~~ 140 (243)
T 4eh1_A 119 LISAGVGATPMQAILHTLAKQN 140 (243)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTT
T ss_pred EEEccccHHHHHHHHHHHHHcC
Confidence 9999999999999999988654
No 48
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.16 E-value=1.6e-11 Score=123.95 Aligned_cols=84 Identities=17% Similarity=0.131 Sum_probs=69.5
Q ss_pred CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCCceEEEEEeCCC-ccCCCC-CCCcE
Q 007567 490 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSN-FKLPAD-AKVPI 567 (598)
Q Consensus 490 l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~~~i~v~~s~-F~lp~~-~~~Pi 567 (598)
..+|.|||+|+|.. .+.++|+|+++ ..|.+|+||.++.+++ .+.|..+.++ |.+|.+ ...|+
T Consensus 50 ~~~R~ySi~s~~~~-~~~l~~~vk~~---------~~G~~S~~l~~l~~Gd------~v~v~gP~G~~f~l~~~~~~~~~ 113 (262)
T 1ep3_B 50 LLRRPISISSWDKR-AKTCTILYRIG---------DETTGTYKLSKLESGA------KVDVMGPLGNGFPVAEVTSTDKI 113 (262)
T ss_dssp CSCEEEECCEEETT-TTEEEEEEECC---------CTTSHHHHHHTCCTTC------EEEEEEEESBCCCCTTCCTTSEE
T ss_pred eeeEEEEeeeecCC-CCEEEEEEEEe---------cCCchHHHHhcCCCCC------EEEEEcccCCCccCCCccCCCeE
Confidence 67899999999864 47899988753 2588999999877753 5777777787 999875 46899
Q ss_pred EEEeCCCChHhHHHHHHHHhhc
Q 007567 568 IMIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 568 ImIg~GTGiAPfr~flqer~~~ 589 (598)
||||+|||||||+++|+++.+.
T Consensus 114 lliagGtGitP~~s~l~~l~~~ 135 (262)
T 1ep3_B 114 LIIGGGIGVPPLYELAKQLEKT 135 (262)
T ss_dssp EEEEEGGGSHHHHHHHHHHHHH
T ss_pred EEEECcCcHHHHHHHHHHHHHc
Confidence 9999999999999999998764
No 49
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.16 E-value=3.1e-11 Score=123.17 Aligned_cols=94 Identities=17% Similarity=0.277 Sum_probs=71.9
Q ss_pred CCCCCcccccCCCCCCCCCeEEEEEEEEEe--eCC-C---CCcccCcchHHhhccCCCCCCCCCceEEEEEeCCCccCCC
Q 007567 488 PRLQPRYYSISSSPRVAPSRIHVTCALVYE--KTP-T---GRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPA 561 (598)
Q Consensus 488 p~l~pR~YSIsSsp~~~~~~i~itv~~v~~--~~~-~---g~~~~G~~S~~L~~~~~~~~~~~~~~~~i~v~~s~F~lp~ 561 (598)
....+|.|||+|+|.. .+.++|+|+++.. ++. . .+...|.+|+||.++.++ +.+.|..+.++|.++.
T Consensus 82 ~~~~~R~ySi~s~~~~-~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~l~~G------d~v~v~gP~G~f~~~~ 154 (290)
T 2r6h_A 82 EEETVRAYSMANYPAE-GNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPG------DKVMMSGPYGDFHIQD 154 (290)
T ss_dssp CSCEEEEEECCSCTTC-CSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTTCCTT------CEEEEEEEECCCCCCS
T ss_pred CCCcceeeeccCCCCC-CCEEEEEEEEeccccccccccccccCCCcchhhHHhcCCCC------CEEEEEecccCCcCCC
Confidence 3457899999999875 4789998876421 110 0 123579999999997665 3577777889999874
Q ss_pred CCCCcEEEEeCCCChHhHHHHHHHHhhc
Q 007567 562 DAKVPIIMIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 562 ~~~~PiImIg~GTGiAPfr~flqer~~~ 589 (598)
...|+||||+|||||||++||+++...
T Consensus 155 -~~~~~vliagGtGitP~~s~l~~~~~~ 181 (290)
T 2r6h_A 155 -TDAEMLYIGGGAGMAPLRAQILHLFRT 181 (290)
T ss_dssp -SSCEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred -CCCeEEEEECccCHHHHHHHHHHHHHh
Confidence 568999999999999999999987653
No 50
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=99.16 E-value=1.2e-10 Score=109.45 Aligned_cols=133 Identities=14% Similarity=0.134 Sum_probs=89.0
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcc--------------------hH---HHHhhccC
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEE--------------------DE---YEEKLKKE 160 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~--------------------~~---~~~~l~~~ 160 (598)
+++++|+|.|.||||+++|+.|++.+... .+++.+...|..++ ++ ...++.++
T Consensus 4 ~~kilIvY~S~tG~T~~vA~~Ia~~l~~~----~~~i~~~~~y~~~~l~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~y 79 (162)
T 3klb_A 4 DRKILVAYFSCSGVTKAVAEKLAAITGAD----LYEIKPEVPYTEADLDWNDKKSRSSVEMRDALSRPAISGTLFHPEKY 79 (162)
T ss_dssp GSCEEEEECCSSSHHHHHHHHHHHHHTCE----EEECCBSSCCCTGGGCTTCTTSHHHHHHTCTTCCCCBSCCCSCGGGC
T ss_pred CCCEEEEEECCCchHHHHHHHHHHHhCCC----eEEEEeCCcCCccccchhhHHHHHHHHHhccccCccccccccChhhC
Confidence 46899999999999999999999987532 12232233322100 00 01246788
Q ss_pred CeEEEEEecCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEee-cCCcchhHhHHHHHHHHHHHhcCCeEeecceec
Q 007567 161 NIVFFFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGL-GNRQYEHFNKIAKVVDEILANQGAKRLVPVGLG 239 (598)
Q Consensus 161 ~~vIf~~sTyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGL-Gds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~g 239 (598)
+.+||++||| .|.+|..+..|++.+ .++|+++++|+. |++.+ ..+.+.+.+.|. |++-+ +-...
T Consensus 80 d~iilG~P~~-~g~~~~~~~~fl~~~--------~l~gk~v~~f~t~g~~~~---g~~~~~l~~~l~--~~~~~-~g~~~ 144 (162)
T 3klb_A 80 EVLFVGFPVW-WYIAPTIINTFLESY--------DFAGKIVVPFATSGGSGI---GNCEKNLHKAYP--DIVWK-DGKLL 144 (162)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHTS--------CCTTCEEEEEEECSSCCS---HHHHHHHHHHCT--TSEEC-CCEEC
T ss_pred CEEEEEcccc-cCCCCHHHHHHHHhc--------CCCCCEEEEEEEeCCCCc---cHHHHHHHHHcC--CCEee-cceEE
Confidence 9999999999 699999888887643 478999999996 44444 356677777775 56543 21111
Q ss_pred cCCCCchHHHHHHHHHH
Q 007567 240 DDDQCIEDDFSAWRELV 256 (598)
Q Consensus 240 D~~~~~e~~f~~W~~~l 256 (598)
.....++++.+|.+++
T Consensus 145 -~g~~~~~~v~~W~~~~ 160 (162)
T 3klb_A 145 -NGQITRDLVTEWFEKI 160 (162)
T ss_dssp -CSCCCHHHHHHHHHHT
T ss_pred -eCCCCHHHHHHHHHHh
Confidence 1123578999998764
No 51
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.15 E-value=2.9e-11 Score=122.52 Aligned_cols=92 Identities=15% Similarity=0.089 Sum_probs=70.6
Q ss_pred CCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCCceEEEEEeCCCcc--------CCCC
Q 007567 491 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFK--------LPAD 562 (598)
Q Consensus 491 ~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~~~i~v~~s~F~--------lp~~ 562 (598)
.+|.|||+|+|.. ++.++|+|+++.+.+..+....|.+|+||.++.+++ .+.|..+.++|. ||.+
T Consensus 64 ~~R~ySi~s~~~~-~~~~~l~vk~~~~~~~~~~~~~G~~S~~L~~l~~Gd------~v~v~gP~G~~~~~~~~~f~l~~~ 136 (275)
T 1umk_A 64 VVRPYTPISSDDD-KGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGD------TIEFRGPSGLLVYQGKGKFAIRPD 136 (275)
T ss_dssp EEEEECCSSCTTC-CSEEEEEEECCCSSSBTTBTTCCHHHHHHHHCCTTC------EEEEEEEECSEEEEETTEEEECSS
T ss_pred EEeccccCCccCC-CCeEEEEEEEeccCcccccCCCChhHHHHhcCCCCC------EEEEEcCccceEecCCcccccccc
Confidence 4699999999864 578999998764444334446799999998877653 566666677764 4432
Q ss_pred --------CCCcEEEEeCCCChHhHHHHHHHHhhc
Q 007567 563 --------AKVPIIMIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 563 --------~~~PiImIg~GTGiAPfr~flqer~~~ 589 (598)
...|+||||+|||||||+++|+++...
T Consensus 137 ~~~~~~~~~~~~~vliagGtGIaP~~~~l~~l~~~ 171 (275)
T 1umk_A 137 KKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKD 171 (275)
T ss_dssp TTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTC
T ss_pred ccccccccCCceEEEEecCccHhHHHHHHHHHHhC
Confidence 357999999999999999999998754
No 52
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.14 E-value=4e-11 Score=128.15 Aligned_cols=83 Identities=17% Similarity=0.331 Sum_probs=69.3
Q ss_pred CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhc-cCCCCCCCCCceEEEEEeCCCccCCCCCCCcEE
Q 007567 490 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSWAPIFVRQSNFKLPADAKVPII 568 (598)
Q Consensus 490 l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~-~~~~~~~~~~~~~~i~v~~s~F~lp~~~~~PiI 568 (598)
.++|.|||+|+|. .+.++|+|+++ ..|.+|+||++ +.++ +.+.|..+.|.|.++.+...|+|
T Consensus 201 ~~~R~YSi~s~p~--~~~~~i~Vk~~---------~~G~~S~~L~~~l~~G------d~v~v~gP~G~f~l~~~~~~~~v 263 (396)
T 1gvh_A 201 QEIRQYSLTRKPD--GKGYRIAVKRE---------EGGQVSNWLHNHANVG------DVVKLVAPAGDFFMAVADDTPVT 263 (396)
T ss_dssp CEEEEEECCSCCC--SSCEEEEEECC---------TTCHHHHHHHHTCCTT------CEEEEEEEECSCCCCCCTTCCEE
T ss_pred ceeecceeccCCC--CCeEEEEEEEc---------CCCcchHHHHhcCCCC------CEEEEEcCCcceECCCCCCCCEE
Confidence 4679999999986 46799888743 25999999997 6655 36778888899999866679999
Q ss_pred EEeCCCChHhHHHHHHHHhhc
Q 007567 569 MIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 569 mIg~GTGiAPfr~flqer~~~ 589 (598)
|||+|||||||+++|++....
T Consensus 264 lIagGtGitP~~s~l~~l~~~ 284 (396)
T 1gvh_A 264 LISAGVGQTPMLAMLDTLAKA 284 (396)
T ss_dssp EEEEGGGGHHHHHHHHHHHHH
T ss_pred EEecchhHhHHHHHHHHHHhc
Confidence 999999999999999998764
No 53
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.14 E-value=4.5e-11 Score=119.57 Aligned_cols=94 Identities=20% Similarity=0.293 Sum_probs=73.3
Q ss_pred hhhHhhhcCC-CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhh-ccCCCCCCCCCceEEEEEeCCCc
Q 007567 480 GVFFAAIVPR-LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMK-NSLPMEKSNDCSWAPIFVRQSNF 557 (598)
Q Consensus 480 ~~ll~~i~p~-l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~-~~~~~~~~~~~~~~~i~v~~s~F 557 (598)
++++...+|. ..+|.|||+|+|.. .+.++|+|+++ ..|.+|+||. ++.+++ .+.|..+.++|
T Consensus 47 GQ~v~l~~~~~~~~R~ySi~s~~~~-~~~l~i~vk~~---------~~G~~s~~l~~~l~~Gd------~v~v~gP~G~~ 110 (250)
T 1tvc_A 47 GQFMDLTIPGTDVSRSYSPANLPNP-EGRLEFLIRVL---------PEGRFSDYLRNDARVGQ------VLSVKGPLGVF 110 (250)
T ss_dssp CCEEEECTTSCSSSEEECCBCCSSS-SCCEEEEECCC---------TTSSSHHHHHHHSSSSS------EEEEEEEECCC
T ss_pred CcEEEEEeCCCccccccccCCCCCC-CCeEEEEEEEC---------CCCCchHHHHhcCCCCC------EEEEEcCcccc
Confidence 4444322344 57899999999874 46899888643 3599999996 676653 56777778999
Q ss_pred cCCCCCCCcEEEEeCCCChHhHHHHHHHHhhc
Q 007567 558 KLPADAKVPIIMIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 558 ~lp~~~~~PiImIg~GTGiAPfr~flqer~~~ 589 (598)
.++.+...|+||||+|||||||++++++....
T Consensus 111 ~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~ 142 (250)
T 1tvc_A 111 GLKERGMAPRYFVAGGTGLAPVVSMVRQMQEW 142 (250)
T ss_dssp SCCCCSSSCEEEEEESSTTHHHHHHHHHHHHH
T ss_pred ccCccCCceEEEEEeccCHHHHHHHHHHHHhc
Confidence 99876668999999999999999999998764
No 54
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.13 E-value=4.4e-11 Score=128.11 Aligned_cols=86 Identities=23% Similarity=0.320 Sum_probs=69.2
Q ss_pred CCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhc-cCCCCCCCCCceEEEEEeCCCccCCCCCCCcEEE
Q 007567 491 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIM 569 (598)
Q Consensus 491 ~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~-~~~~~~~~~~~~~~i~v~~s~F~lp~~~~~PiIm 569 (598)
++|.|||+|+|. .+.++|+|+++. .++.+.|.+|+||++ +.+++ .+.|..+.|.|.++.+...|+||
T Consensus 204 ~~R~YSi~s~p~--~~~~~i~Vk~~~----~~~~~~G~~S~~L~~~l~~Gd------~v~v~gP~G~f~l~~~~~~~~vl 271 (403)
T 1cqx_A 204 QIRQYSLSDMPN--GRTYRISVKREG----GGPQPPGYVSNLLHDHVNVGD------QVKLAAPYGSFHIDVDAKTPIVL 271 (403)
T ss_dssp EEEEEECCSCCC--SSCEEEEEECCC----BTTBCCCHHHHHHHHHCCTTC------EEEECCCBCSCSCCTTCCSCEEE
T ss_pred eeecceecCCCC--CCeEEEEEEECC----CCCCCCCeehHHHhhCCCCCC------EEEEecCccCcccCCCCCCCEEE
Confidence 579999999986 468999887552 122347999999995 66653 56666677899998666799999
Q ss_pred EeCCCChHhHHHHHHHHhh
Q 007567 570 IGPGTGLAPFRGSWSRTGT 588 (598)
Q Consensus 570 Ig~GTGiAPfr~flqer~~ 588 (598)
||+|||||||+++|++...
T Consensus 272 IagGtGitP~~s~l~~l~~ 290 (403)
T 1cqx_A 272 ISGGVGLTPMVSMLKVALQ 290 (403)
T ss_dssp EESSCCHHHHHHHHHHHTC
T ss_pred EEecccHhhHHHHHHHHHh
Confidence 9999999999999999876
No 55
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.13 E-value=6.2e-11 Score=117.81 Aligned_cols=82 Identities=18% Similarity=0.195 Sum_probs=68.3
Q ss_pred CcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCCceEEEEEeCCCccCCCCCCCcEEEEe
Q 007567 492 PRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIG 571 (598)
Q Consensus 492 pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~~~i~v~~s~F~lp~~~~~PiImIg 571 (598)
.|.|||+|+|.. .+.++|+|+++ ..|.+|+||.++.+++ .+.|..+.++|.++.+...+++|||
T Consensus 60 ~R~ysi~s~~~~-~~~~~l~vk~~---------~~G~~S~~l~~l~~Gd------~v~v~gP~G~f~~~~~~~~~~vlia 123 (243)
T 2eix_A 60 YRPYTPVSSDDE-KGYFDLIIKVY---------EKGQMSQYIDHLNPGD------FLQVRGPKGQFDYKPNMVKEMGMIA 123 (243)
T ss_dssp EEEECCCSCTTC-CSEEEEEEECC---------TTCHHHHHHHTCCTTC------EEEEEEEECSCCCCTTSSSEEEEEE
T ss_pred EeeeeecCCCCC-CCEEEEEEEEc---------CCCCcchHhhcCCCCC------EEEEECCeEEEEeCCCCCcEEEEEe
Confidence 599999999864 47899988754 3699999999877653 5677777899999876678999999
Q ss_pred CCCChHhHHHHHHHHhhc
Q 007567 572 PGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 572 ~GTGiAPfr~flqer~~~ 589 (598)
+|||||||++++++....
T Consensus 124 gG~GiaP~~~~l~~l~~~ 141 (243)
T 2eix_A 124 GGTGITPMLQVARAIIKN 141 (243)
T ss_dssp EGGGHHHHHHHHHHHHTC
T ss_pred cCccHHHHHHHHHHHHhC
Confidence 999999999999998753
No 56
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=99.12 E-value=2.4e-10 Score=110.56 Aligned_cols=123 Identities=11% Similarity=0.077 Sum_probs=97.6
Q ss_pred CceEEEEEeCC--CchHHHHHHHHHHH-HHhhcCCceeEEEcCCCCCC-----------cchHHHHhhccCCeEEEEEec
Q 007567 104 KQKVTIFFGTQ--TGTAEGFAKALADE-ARARYDKAIFKVVDIDDYAD-----------EEDEYEEKLKKENIVFFFLAT 169 (598)
Q Consensus 104 ~~~v~I~YgSq--TGtae~~A~~la~~-l~~~~~~~~~~v~dl~~~~~-----------~~~~~~~~l~~~~~vIf~~sT 169 (598)
|++|+|+|||. +|+|+.+|+.+++. +.+.+ ..++++|+.+++. +-.++.+++.+.+.+||++|+
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g--~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~sP~ 79 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSD--SQGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCNADGLIVATPI 79 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSS--EEEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHHCSEEEEEEEC
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCC--CeEEEEEccccCchhhcccccCcHHHHHHHHHHHHCCEEEEEeCc
Confidence 46899999997 89999999999999 88764 5678899988753 111223567889999999999
Q ss_pred CCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeec
Q 007567 170 YGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVP 235 (598)
Q Consensus 170 yG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~ 235 (598)
| .|.+|...+.|++|+.. ..++++++++|+.|... .+++.....+...|..+|++.+.+
T Consensus 80 y-~~~~p~~lK~~ld~l~~-----~~~~gK~~~~~~tgg~~-~~~~a~~~~l~~~l~~~g~~~v~~ 138 (197)
T 2vzf_A 80 Y-KASYTGLLKAFLDILPQ-----FALAGKAALPLATGGSP-AHVLALDYGLRPVLHSMGVRHVVQ 138 (197)
T ss_dssp B-TTBCCHHHHHHHTTSCT-----TTTTTCEEEEEEEESSG-GGGGHHHHTHHHHHHTTTCSEECC
T ss_pred c-CCCCCHHHHHHHHhccc-----cccCCCEEEEEEECCCc-chhhHHHHHHHHHHHHcCCEeccc
Confidence 9 68999999999999853 35889999999997653 344433347899999999987653
No 57
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.12 E-value=5e-11 Score=120.36 Aligned_cols=91 Identities=13% Similarity=0.160 Sum_probs=68.9
Q ss_pred CCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCc-ccCcchHHhhccCCCCCCCCCceEEEEEeCCC--------ccCCC
Q 007567 491 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRV-HKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSN--------FKLPA 561 (598)
Q Consensus 491 ~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~-~~G~~S~~L~~~~~~~~~~~~~~~~i~v~~s~--------F~lp~ 561 (598)
.+|.|||+|+|.. ++.++|+|+++. .+..++. ..|.+|+||.++.+++ .+.|..+.++ |.+|.
T Consensus 60 ~~R~ySi~s~~~~-~~~~~l~vk~~~-~~~~~~~~~~G~~s~~l~~l~~Gd------~v~v~gP~G~~~~~~~g~f~l~~ 131 (270)
T 2cnd_A 60 CMRAYTPTSMVDE-IGHFDLLVKVYF-KNEHPKFPNGGLMTQYLDSLPVGS------YIDVKGPLGHVEYTGRGSFVING 131 (270)
T ss_dssp EEEEECCCSCTTC-CSEEEEEEECCC-SSCBTTBTTCCHHHHHHHHCCTTC------EEEEEEEECSEECCSSSCEEETT
T ss_pred EEEeeccCCCccC-CCEEEEEEEEec-cCcccccCCCCchhhHHhcCCCCC------EEEEECCcccceeccccceeccC
Confidence 4699999999864 578999987652 1222222 3699999998877653 5666666665 77775
Q ss_pred --CCCCcEEEEeCCCChHhHHHHHHHHhhc
Q 007567 562 --DAKVPIIMIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 562 --~~~~PiImIg~GTGiAPfr~flqer~~~ 589 (598)
+...|+||||+|||||||+++++++...
T Consensus 132 ~~~~~~~~vliagGtGiaP~~~~l~~l~~~ 161 (270)
T 2cnd_A 132 KQRNARRLAMICGGSGITPMYQIIQAVLRD 161 (270)
T ss_dssp EEECCSEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred CcccCCEEEEEeccccHHHHHHHHHHHHhc
Confidence 2468999999999999999999998764
No 58
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=99.12 E-value=4.3e-10 Score=106.81 Aligned_cols=135 Identities=14% Similarity=0.191 Sum_probs=90.6
Q ss_pred cCCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcch-------H----------------HHHhhc
Q 007567 102 DGKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEED-------E----------------YEEKLK 158 (598)
Q Consensus 102 ~~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~-------~----------------~~~~l~ 158 (598)
..+++++|+|.|.||||+.+|+.|++.+... .+++.+...|..++. . ...++.
T Consensus 11 ~~~mkilIvY~S~tGnT~~vA~~Ia~~l~~d----~~~I~~~~~y~~~~~~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~ 86 (171)
T 4ici_A 11 HSNSKILVAYFSATGTTARAAEKLGAAVGGD----LYPIAPAQPYTSADLDWNNKRSRSSVEMNDPKMRPAIKSKKENIG 86 (171)
T ss_dssp --CCCEEEEECCSSSHHHHHHHHHHHHHTCE----EEECCBSSCCCTGGGCTTCTTSHHHHHHHCTTCCCCBSCCCTTGG
T ss_pred cCCCCEEEEEECCCChHHHHHHHHHHHhCCC----eEEEeeCCCCCccccchhhHhHHHHHHHhcccCCcccccccccHh
Confidence 3467899999999999999999999988532 123333333321000 0 013577
Q ss_pred cCCeEEEEEecCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeeccee
Q 007567 159 KENIVFFFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL 238 (598)
Q Consensus 159 ~~~~vIf~~sTyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~ 238 (598)
.++.+||++||| .|.+|..+..|++.+ .++|+++++|+.+... .+..+.+.+.+.|. |++- .+-..
T Consensus 87 ~yD~iilg~Pvy-~g~~~~~~~~fl~~~--------~l~gk~v~~f~t~g~~--~~g~a~~~l~~~l~--~~~~-~~g~~ 152 (171)
T 4ici_A 87 TYDVVFIGYPIW-WDLAPRIINTFIEGH--------SLKGKTVVPFATSGGS--SIGNSATVLKKTYP--DLNW-KEGRL 152 (171)
T ss_dssp GCSEEEEEEECB-TTBCCHHHHHHHHHS--------CCTTSEEEEEEECSSC--CSHHHHHHHHHHST--TSEE-CCCEE
T ss_pred HCCEEEEecccc-cCCchHHHHHHHHHc--------CCCcCEEEEEEecCCC--CcchHHHHHHHHcC--CCee-ccCeE
Confidence 899999999999 488998888887654 3789999999974221 24566777777775 5553 22222
Q ss_pred ccCCCCchHHHHHHHHHH
Q 007567 239 GDDDQCIEDDFSAWRELV 256 (598)
Q Consensus 239 gD~~~~~e~~f~~W~~~l 256 (598)
.. ...++++..|.+.+
T Consensus 153 ~~--~~~~~~i~~Wl~~~ 168 (171)
T 4ici_A 153 LN--RTDEKAIRAWLDVI 168 (171)
T ss_dssp CS--SCCHHHHHHHHHHH
T ss_pred ec--CCCHHHHHHHHHHh
Confidence 22 13578899998765
No 59
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.09 E-value=8.8e-11 Score=125.75 Aligned_cols=90 Identities=14% Similarity=0.285 Sum_probs=71.1
Q ss_pred CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhh-ccCCCCCCCCCceEEEEEeCCCccCCCC----CC
Q 007567 490 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMK-NSLPMEKSNDCSWAPIFVRQSNFKLPAD----AK 564 (598)
Q Consensus 490 l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~-~~~~~~~~~~~~~~~i~v~~s~F~lp~~----~~ 564 (598)
.++|.|||+|+|.. +.++|+|+.... .+..+.|.+|+||+ ++.++ +.+.|..+.|.|.++.+ ..
T Consensus 204 ~~~R~ySi~s~p~~--~~~~i~Vk~~~~---~~~~~~G~~S~~L~~~l~~G------d~v~v~gP~G~f~l~~~~~~~~~ 272 (399)
T 4g1v_A 204 DALRHYSLCSASTK--NGLRFAVKMEAA---RENFPAGLVSEYLHKDAKVG------DEIKLSAPAGDFAINKELIHQNE 272 (399)
T ss_dssp CEEEEEEBSCSCCT--TCEEEEEECCCC---BTTBCCCHHHHHHHHTCCTT------CEEEEEEEECSCCCCTTTTTCSS
T ss_pred ceeeeecccCCCCC--CeEEEEEEeccC---CCCCCCCEehhHHHhCCCCC------CEEEEEecccceeeCcccccCCC
Confidence 36799999999863 678888865321 12235899999997 56664 36778888899999876 57
Q ss_pred CcEEEEeCCCChHhHHHHHHHHhhcc
Q 007567 565 VPIIMIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 565 ~PiImIg~GTGiAPfr~flqer~~~~ 590 (598)
.|+||||+|||||||+++|++....+
T Consensus 273 ~~~vlIagG~GitP~~s~l~~l~~~~ 298 (399)
T 4g1v_A 273 VPLVLLSSGVGVTPLLAMLEEQVKCN 298 (399)
T ss_dssp SCEEEEEEGGGHHHHHHHHHHHHHHC
T ss_pred CCEEEEecceeHhHHHHHHHHHHHcC
Confidence 89999999999999999999987653
No 60
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.09 E-value=6.7e-11 Score=117.91 Aligned_cols=81 Identities=19% Similarity=0.197 Sum_probs=65.8
Q ss_pred CCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCCceEEEE-EeCCCccCCCCC-CCcEE
Q 007567 491 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF-VRQSNFKLPADA-KVPII 568 (598)
Q Consensus 491 ~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~~~i~-v~~s~F~lp~~~-~~PiI 568 (598)
..|.|||+|+|.. +.++|+|+.+ +.|.+|+||+++.+++ .+.|. .+.+.|.++.++ ..|++
T Consensus 48 ~~R~ySi~s~~~~--~~l~~~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~~gP~G~f~l~~~~~~~~~v 110 (248)
T 1fdr_A 48 VQRAYSYVNSPDN--PDLEFYLVTV---------PDGKLSPRLAALKPGD------EVQVVSEAAGFFVLDEVPHCETLW 110 (248)
T ss_dssp EEEEEECCSCTTC--SSEEEEEECC---------TTCSSHHHHHTCCTTC------EEEEESSCBCCCSGGGSCCCSEEE
T ss_pred eeeeecccCCCCC--CcEEEEEEEe---------CCCchhhHHHhCCCcC------EEEEecCCcceeEcCCCCCCceEE
Confidence 5799999999864 6788888644 3689999999876653 56666 566889988654 68999
Q ss_pred EEeCCCChHhHHHHHHHHhh
Q 007567 569 MIGPGTGLAPFRGSWSRTGT 588 (598)
Q Consensus 569 mIg~GTGiAPfr~flqer~~ 588 (598)
|||+|||||||++++++...
T Consensus 111 liagG~GitP~~~~l~~l~~ 130 (248)
T 1fdr_A 111 MLATGTAIGPYLSILRLGKD 130 (248)
T ss_dssp EEEEGGGGHHHHHHHHHCCS
T ss_pred EEEecccHHHHHHHHHHHHh
Confidence 99999999999999998754
No 61
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.08 E-value=8.9e-11 Score=122.78 Aligned_cols=93 Identities=24% Similarity=0.321 Sum_probs=72.7
Q ss_pred hhhHhhhcCC-CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhh-ccCCCCCCCCCceEEEEEeCCCc
Q 007567 480 GVFFAAIVPR-LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMK-NSLPMEKSNDCSWAPIFVRQSNF 557 (598)
Q Consensus 480 ~~ll~~i~p~-l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~-~~~~~~~~~~~~~~~i~v~~s~F 557 (598)
++++...+|. ..+|.|||+|+|. .+.++|+|+++ ..|.+|+||. ++.++ +.+.|..+.++|
T Consensus 142 GQ~v~l~~~~~~~~R~ySi~s~~~--~~~l~~~vk~~---------~~G~~S~~L~~~l~~G------d~v~v~gP~G~f 204 (338)
T 1krh_A 142 GQYVNVTLPGTTETRSYSFSSQPG--NRLTGFVVRNV---------PQGKMSEYLSVQAKAG------DKMSFTGPFGSF 204 (338)
T ss_dssp TCEEEEECTTSSCEEEEECCSCTT--CSEEEEEEECC---------TTCHHHHHHHTTCCTT------CEEEEEEEECSC
T ss_pred CCeEEEEcCCCCccccccccCCCC--CCeEEEEEEEc---------CCCCchhhHhhccCCC------CEEEEECCccce
Confidence 3444333354 5689999999987 57899988754 3699999995 66664 357777778999
Q ss_pred cCCCCCCCcEEEEeCCCChHhHHHHHHHHhhcc
Q 007567 558 KLPADAKVPIIMIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 558 ~lp~~~~~PiImIg~GTGiAPfr~flqer~~~~ 590 (598)
.++.+ ..|+||||+|||||||++++++....+
T Consensus 205 ~~~~~-~~~~vliagGtGiaP~~s~l~~l~~~~ 236 (338)
T 1krh_A 205 YLRDV-KRPVLMLAGGTGIAPFLSMLQVLEQKG 236 (338)
T ss_dssp SCCCC-SSCEEEEEEGGGHHHHHHHHHHHHHHC
T ss_pred EeCCC-CceEEEEEccccHhHHHHHHHHHHHcC
Confidence 98876 489999999999999999999987643
No 62
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.07 E-value=6.5e-11 Score=116.84 Aligned_cols=95 Identities=19% Similarity=0.217 Sum_probs=70.0
Q ss_pred hhhhHhhhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHH-hhccCCCCCCCCCceEEEEEeCCCc
Q 007567 479 LGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTW-MKNSLPMEKSNDCSWAPIFVRQSNF 557 (598)
Q Consensus 479 l~~ll~~i~p~l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~-L~~~~~~~~~~~~~~~~i~v~~s~F 557 (598)
.++++...+|...+|.|||+|+|.. ++.++|+|+++. .|.+|+| +.++.++ +.+.|..+.++|
T Consensus 32 pGq~v~l~~~~~~~R~ySi~s~~~~-~~~l~l~i~~~~---------~G~~s~~~~~~l~~G------d~v~v~gP~G~~ 95 (232)
T 1qfj_A 32 AGQYLMVVMDERDKRPFSMASTPDE-KGFIELHIGASE---------INLYAKAVMDRILKD------HQIVVDIPHGEA 95 (232)
T ss_dssp TTCEEEEESSSSCEEEEECCSCTTS-TTCEEEEEC---------------CCHHHHHHHHHH------SEEEEEEEECSC
T ss_pred CCCEEEEECCCCceeeeecCCCCCC-CCcEEEEEEEcc---------CCchhHHHHHhCCCC------CEEEEeCCccce
Confidence 3555543346678899999999874 468999887652 4666665 6666654 357777778999
Q ss_pred cCCCCCCCcEEEEeCCCChHhHHHHHHHHhhc
Q 007567 558 KLPADAKVPIIMIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 558 ~lp~~~~~PiImIg~GTGiAPfr~flqer~~~ 589 (598)
.++.+...|+||||+|||||||++++++....
T Consensus 96 ~~~~~~~~~~vliagG~GitP~~~~l~~l~~~ 127 (232)
T 1qfj_A 96 WLRDDEERPMILIAGGTGFSYARSILLTALAR 127 (232)
T ss_dssp CCCSCSSSCEEEEEETTCHHHHHHHHHHHHHH
T ss_pred EeCCCCCCcEEEEEecccHhHHHHHHHHHHhc
Confidence 99876678999999999999999999998764
No 63
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=99.05 E-value=3.2e-09 Score=101.91 Aligned_cols=157 Identities=11% Similarity=0.047 Sum_probs=116.5
Q ss_pred CceEEEEEeCCC---chHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCc---------------------------chHH
Q 007567 104 KQKVTIFFGTQT---GTAEGFAKALADEARARYDKAIFKVVDIDDYADE---------------------------EDEY 153 (598)
Q Consensus 104 ~~~v~I~YgSqT---Gtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~---------------------------~~~~ 153 (598)
|++|+|+|||.. |+|+.+|+.+++.+.++++...++++|+.+++.. ..++
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 80 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDEL 80 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETTTSCCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHHH
Confidence 468999999998 9999999999999998765567889999876421 0123
Q ss_pred HHhhccCCeEEEEEecCCCCCcchHHHHHHHHHHhhcC--------CCcccCCceEEEEeecCCcchh--HhHHHHHHHH
Q 007567 154 EEKLKKENIVFFFLATYGDGEPTDNAARFYKWFTEQKE--------GGEWLQKLKYGVFGLGNRQYEH--FNKIAKVVDE 223 (598)
Q Consensus 154 ~~~l~~~~~vIf~~sTyG~Geppdna~~F~~~L~~~~~--------~~~~l~~~~yaVFGLGds~Y~~--Fn~~~k~ld~ 223 (598)
.+++...+.+||++|+| .|.+|.-.+.|++++..... +...++++++++|+.+...|.. |+.+...+..
T Consensus 81 ~~~l~~aD~iv~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~~l~~ 159 (201)
T 1t5b_A 81 IAELKAHDVIVIAAPMY-NFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKV 159 (201)
T ss_dssp HHHHHHCSEEEEECCCB-TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCCTTSTTCCHHHHHHH
T ss_pred HHHHHhCCEEEEEeCcc-cCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCCCCCchhhHHHHHHH
Confidence 45778899999999999 78999999999999863100 0124889999999987666643 6667788899
Q ss_pred HHHhcCCeEeecceeccCCCCchHHHHHHHHHHHHHHHh
Q 007567 224 ILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDN 262 (598)
Q Consensus 224 ~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~~ 262 (598)
.|..+|++.+........+. .++..++|.++....+.+
T Consensus 160 ~l~~~G~~~~~~~~~~~~~~-~~~~~~~~l~~a~~~~~~ 197 (201)
T 1t5b_A 160 FLGFIGITDVNFVFAEGIAY-GPEVAAKAQADAKAAIDS 197 (201)
T ss_dssp HHHHTTCCCEEEEEECCGGG-CHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCcceeEEEEEecccC-ChHHHHHHHHHHHHHHHH
Confidence 99999999765543322222 344457787776655544
No 64
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.02 E-value=1.9e-10 Score=119.67 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=72.9
Q ss_pred hhhhHhhhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCc-chHHhh-ccCCCCCCCCCceEEEEEeCCC
Q 007567 479 LGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGL-CSTWMK-NSLPMEKSNDCSWAPIFVRQSN 556 (598)
Q Consensus 479 l~~ll~~i~p~l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~-~S~~L~-~~~~~~~~~~~~~~~i~v~~s~ 556 (598)
.++++..-+|....|.|||+|+|.. .+.++|+|+++ ..|. +|+||+ ++.+++ .+.|..+.+.
T Consensus 41 pGQ~v~l~~~~g~~R~ySi~s~~~~-~~~l~i~Vk~~---------~~G~g~S~~L~~~l~~Gd------~v~v~gP~g~ 104 (321)
T 2pia_A 41 AGANLTVAVPNGSRRTYSLCNDSQE-RNRYVIAVKRD---------SNGRGGSISFIDDTSEGD------AVEVSLPRNE 104 (321)
T ss_dssp TTCEEEEECTTSCEEEEECCSCTTC-CSEEEEEEECC---------TTSCSHHHHHHHSCCTTC------EEEECCCBCC
T ss_pred CCCEEEEECCCCCcEEEEeCCCCCC-CCeEEEEEEEe---------cCCcchhHHHHhcCCCCC------EEEEeCCccc
Confidence 3455533345557899999999864 46889888643 3577 999999 676653 5666666789
Q ss_pred ccCCCCCCCcEEEEeCCCChHhHHHHHHHHhhcc
Q 007567 557 FKLPADAKVPIIMIGPGTGLAPFRGSWSRTGTLS 590 (598)
Q Consensus 557 F~lp~~~~~PiImIg~GTGiAPfr~flqer~~~~ 590 (598)
|.++.+ ..++||||+|||||||++++++....+
T Consensus 105 f~l~~~-~~~~vliagG~GItP~~s~l~~l~~~~ 137 (321)
T 2pia_A 105 FPLDKR-AKSFILVAGGIGITPMLSMARQLRAEG 137 (321)
T ss_dssp SCCCTT-CSEEEEEEEGGGHHHHHHHHHHHHHHC
T ss_pred cccCCC-CCCEEEEEecccHhHHHHHHHHHHHcC
Confidence 999865 689999999999999999999987653
No 65
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=98.99 E-value=2e-10 Score=116.50 Aligned_cols=82 Identities=18% Similarity=0.174 Sum_probs=66.1
Q ss_pred CCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCCceEEEE-EeCCCccCCCCC-CCcEE
Q 007567 491 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF-VRQSNFKLPADA-KVPII 568 (598)
Q Consensus 491 ~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~~~i~-v~~s~F~lp~~~-~~PiI 568 (598)
.+|.|||+|+|.. +.++|+|+.+ ..|.+|+||.++.+++ .+.|. .+.+.|.++.+. ..|+|
T Consensus 62 ~~R~ySi~s~~~~--~~~~l~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~~gP~G~f~~~~~~~~~~~v 124 (272)
T 2bgi_A 62 IMRAYSIASPAWD--EELEFYSIKV---------PDGPLTSRLQHIKVGE------QIILRPKPVGTLVIDALLPGKRLW 124 (272)
T ss_dssp EEEEEECCSCTTC--SEEEEEEECC---------TTCTTHHHHTTCCTTC------EEEEEEEEECSCCGGGBCCCSEEE
T ss_pred eeeeeeeccCCCC--CeEEEEEEEc---------cCCCchhHHHhCCCCC------EEEEeeCCCCcccccccccCCeEE
Confidence 4699999999863 6888887644 3699999999876653 56776 567889987654 68999
Q ss_pred EEeCCCChHhHHHHHHHHhhc
Q 007567 569 MIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 569 mIg~GTGiAPfr~flqer~~~ 589 (598)
|||+|||||||++++++....
T Consensus 125 liagG~GiaP~~~~l~~l~~~ 145 (272)
T 2bgi_A 125 FLATGTGIAPFASLMREPEAY 145 (272)
T ss_dssp EEEEGGGGHHHHHHTTCGGGG
T ss_pred EEeecccHHHHHHHHHHHHhc
Confidence 999999999999999987643
No 66
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=98.98 E-value=2.2e-10 Score=115.82 Aligned_cols=81 Identities=20% Similarity=0.169 Sum_probs=65.2
Q ss_pred CCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCCceEEEE-EeCCCccCCC-CCCCcEE
Q 007567 491 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF-VRQSNFKLPA-DAKVPII 568 (598)
Q Consensus 491 ~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~~~i~-v~~s~F~lp~-~~~~PiI 568 (598)
..|.|||+|+|.. +.+++++..+ ..|.+|+||.++.+++ .+.|. .+.|+|.++. +...|+|
T Consensus 64 ~~r~ySi~s~~~~--~~~~~~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~~gP~G~~~~~~~~~~~~~v 126 (271)
T 4fk8_A 64 LTRAYSIVSPNYE--EHLEFFSIKV---------QNGPLTSRLQHLKVGD------PVLIGKKPTGTLVADNLLPGKTLW 126 (271)
T ss_dssp EEEEEECCSCTTS--SSEEEEEECC---------TTCTTHHHHTTCCTTC------EEEEESCCBCSCCGGGBCCCSEEE
T ss_pred eeeeEeccCCCCC--CcEEEEEEEE---------CCCchhhHHhcCCCCC------EEEEecCCCcceecCCcCCCCeEE
Confidence 3699999999853 5688777643 3699999998877653 57777 6778999875 3578999
Q ss_pred EEeCCCChHhHHHHHHHHhh
Q 007567 569 MIGPGTGLAPFRGSWSRTGT 588 (598)
Q Consensus 569 mIg~GTGiAPfr~flqer~~ 588 (598)
|||+|||||||++++++...
T Consensus 127 liagG~GitP~~~~l~~l~~ 146 (271)
T 4fk8_A 127 MLSTGTGLAPFMSIIRDPDI 146 (271)
T ss_dssp EEECGGGGHHHHHHTTCHHH
T ss_pred EEECCEEHHHHHHHHHHHHh
Confidence 99999999999999998754
No 67
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=98.98 E-value=2e-10 Score=115.28 Aligned_cols=81 Identities=17% Similarity=0.156 Sum_probs=64.2
Q ss_pred CCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCCceEEEE-EeCCCccCCCCC-CCcEE
Q 007567 491 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF-VRQSNFKLPADA-KVPII 568 (598)
Q Consensus 491 ~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~~~i~-v~~s~F~lp~~~-~~PiI 568 (598)
..|.|||+|+|.. +.++|+++.+ ..|.+|+||.++.+++ .+.|. .+.+.|.++..+ ..|+|
T Consensus 48 ~~R~ySi~s~~~~--~~~~~~i~~~---------~~G~~s~~l~~l~~Gd------~v~v~~gp~G~f~~~~~~~~~~~v 110 (257)
T 2qdx_A 48 LMRAYSIASPNYE--EHLEFFSIKV---------PDGPLTSRLQHLKEGD------ELMVSRKPTGTLVHDDLLPGKHLY 110 (257)
T ss_dssp EEEEEECCSCTTS--SEEEEEEECC---------TTCTTHHHHTTCCTTC------EEEECSCCBCSCCGGGBCSCSEEE
T ss_pred eeeeeEeecCCCC--CeEEEEEEEe---------CCCcchhHHHhCCCCC------EEEEecCCCCCccCCcccCCCeEE
Confidence 4699999999864 6888887644 3699999999876653 45555 355789887653 68999
Q ss_pred EEeCCCChHhHHHHHHHHhh
Q 007567 569 MIGPGTGLAPFRGSWSRTGT 588 (598)
Q Consensus 569 mIg~GTGiAPfr~flqer~~ 588 (598)
|||+|||||||++++++...
T Consensus 111 liagG~GitP~~~~l~~l~~ 130 (257)
T 2qdx_A 111 LLSTGTGMAPFLSVIQDPET 130 (257)
T ss_dssp EEEEGGGGHHHHHHTTCHHH
T ss_pred EEEeceEHHHHHHHHHHHHh
Confidence 99999999999999998654
No 68
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=98.89 E-value=4.6e-09 Score=97.36 Aligned_cols=127 Identities=9% Similarity=0.160 Sum_probs=84.2
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCC-CCCCcch--------------------HHHHhhccCCe
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDID-DYADEED--------------------EYEEKLKKENI 162 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~-~~~~~~~--------------------~~~~~l~~~~~ 162 (598)
+++++|+|.|.||||+++|+.|++++.... .+++...+ .|+.+.. ....++.+++.
T Consensus 3 ~~kilIvY~S~tGnT~~iA~~Ia~~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~~d~ 79 (151)
T 3edo_A 3 AKKTLILYYSWSGETKKMAEKINSEIKDSE---LKEVKVSEGTFDADXYKTSDIALDQIQGNKDFPEIQLDNIDYNNYDL 79 (151)
T ss_dssp CCCEEEEECCSSSHHHHHHHHHHHHSTTCE---EEECBCCTTSSCSSHHHHHHHHHHHHTTSSCCCCCBCCCCCGGGCSE
T ss_pred CCcEEEEEECCCCcHHHHHHHHHHhccCCC---EEEEEcCCCCCCchhhhhhHHHHHHHhcccCCcccchhhhCHhhCCE
Confidence 468999999999999999999999874321 01211111 1221000 00124678899
Q ss_pred EEEEEecCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccCC
Q 007567 163 VFFFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDD 242 (598)
Q Consensus 163 vIf~~sTyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~ 242 (598)
+||++||| .|.+|..+..|++.+. .+.++.+++|+.|...+ ..+.+.+.+.|. +++-+-.+. .
T Consensus 80 iilG~P~~-~g~~~~~~~~fl~~~~-------~~~~k~~~~~t~gg~~~---g~~~~~l~~~~~--~~~~~~g~~-~--- 142 (151)
T 3edo_A 80 ILIGSPVW-SGYPATPIKTLLDQMK-------NYRGEVASFFTSAGTNH---KAYVSHFNEWAD--GLNVIGVAR-D--- 142 (151)
T ss_dssp EEEEEEEE-TTEECTHHHHHHHHTT-------TCCSEEEEEEECSSCCH---HHHHHHHHHHTT--TSEEEEEEE-T---
T ss_pred EEEEccee-cccccHHHHHHHHhch-------hcCCEEEEEEEeCCCCC---CcHHHHHHHHcC--CCeeecccc-c---
Confidence 99999999 5999999999998763 36788999999876654 344566777664 444332121 1
Q ss_pred CCchHHHHHHH
Q 007567 243 QCIEDDFSAWR 253 (598)
Q Consensus 243 ~~~e~~f~~W~ 253 (598)
+.++.+|.
T Consensus 143 ---~~~~~~w~ 150 (151)
T 3edo_A 143 ---DSEVDKWS 150 (151)
T ss_dssp ---TTTHHHHH
T ss_pred ---HHHHHHHh
Confidence 24588995
No 69
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=98.83 E-value=6.7e-08 Score=96.27 Aligned_cols=153 Identities=11% Similarity=0.109 Sum_probs=112.6
Q ss_pred CceEEEEEeCCC--chHHHHHHHHHHHHHhh-cCCceeEEEcCCCCCC----------------------cchHHHHhhc
Q 007567 104 KQKVTIFFGTQT--GTAEGFAKALADEARAR-YDKAIFKVVDIDDYAD----------------------EEDEYEEKLK 158 (598)
Q Consensus 104 ~~~v~I~YgSqT--Gtae~~A~~la~~l~~~-~~~~~~~v~dl~~~~~----------------------~~~~~~~~l~ 158 (598)
|++|+|+|||.. |+|+.+|+.+++.+.+. + ..++++|+.+++. +-.++.+++.
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g--~~v~~~dl~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~ 78 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNN--VDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELL 78 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSC--CEEEEECTTTCCCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHH
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcC--CeEEEEEcccCCCCCCCchHHhhccCCCCccchHHHHHHHHHHHH
Confidence 468999999986 99999999999999877 4 5678999887632 1123345778
Q ss_pred cCCeEEEEEecCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeeccee
Q 007567 159 KENIVFFFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL 238 (598)
Q Consensus 159 ~~~~vIf~~sTyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~ 238 (598)
..+.+||++|+| .|.+|...+.|++++.... ....++|++.++|+.+... .+..+.+.+...|..+|++.+.+...
T Consensus 79 ~AD~iI~~sP~y-~~~~p~~lK~~iDr~~~~~-~~~~l~gK~~~~i~t~g~~--g~~~~~~~l~~~l~~~G~~~v~~~~~ 154 (242)
T 1sqs_A 79 ESDIIIISSPVY-LQNVSVDTKNFIERIGGWS-HLFRLAGKFVVTLDVAESN--GSDNVSEYLRDIFSYMGGQILHQVSI 154 (242)
T ss_dssp HCSEEEEEEEEC-SSSCCHHHHHHHHHTGGGT-TTTTTTTCEEEEEEEESSC--CSCCHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HCCEEEEEcccc-ccCCCHHHHHHHHHHHHhc-cccccCCCEEEEEEeCCCC--chhhHHHHHHHHHHHCCCeeeeEEEE
Confidence 999999999999 8999999999999985321 2235889999999865322 12356678899999999998766543
Q ss_pred ccC-CCCchHHHHHHHHHHHHHHHh
Q 007567 239 GDD-DQCIEDDFSAWRELVWPELDN 262 (598)
Q Consensus 239 gD~-~~~~e~~f~~W~~~l~~~L~~ 262 (598)
.+. .....+.+.++.+.|...+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~la~~i~~ 179 (242)
T 1sqs_A 155 TNSLKDIAEAQLMEATYKIEDVLEG 179 (242)
T ss_dssp EGGGGGGHHHHHHHHHHHHHHHHTT
T ss_pred eccCChHHHHHHHHHHHHHHHHHhc
Confidence 222 123456677777777666643
No 70
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=98.83 E-value=3.4e-08 Score=94.77 Aligned_cols=124 Identities=10% Similarity=0.132 Sum_probs=96.2
Q ss_pred CceEEEEEeCCC--chHHHHHHHHHHHHHhhcCCceeEEEcCCCCCC------------cchHHHHhhccCCeEEEEEec
Q 007567 104 KQKVTIFFGTQT--GTAEGFAKALADEARARYDKAIFKVVDIDDYAD------------EEDEYEEKLKKENIVFFFLAT 169 (598)
Q Consensus 104 ~~~v~I~YgSqT--Gtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~------------~~~~~~~~l~~~~~vIf~~sT 169 (598)
+++|+|+|||.. |+|+.+|+.+++.+. . +..++++|+.++.. +-.++.+++...+.+||++|+
T Consensus 6 ~Mkilii~gS~r~~g~t~~la~~i~~~l~-~--g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~~sP~ 82 (193)
T 1rtt_A 6 DIKVLGISGSLRSGSYNSAALQEAIGLVP-P--GMSIELADISGIPLYNEDVYALGFPPAVERFREQIRAADALLFATPE 82 (193)
T ss_dssp -CEEEEEESCCSTTCHHHHHHHHHHTTCC-T--TCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHHCSEEEEECCE
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHhcc-C--CCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHhCCEEEEEccc
Confidence 468999999985 999999999999876 3 35678889887432 111234577889999999999
Q ss_pred CCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEee
Q 007567 170 YGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 234 (598)
Q Consensus 170 yG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~ 234 (598)
| .|.+|...+.|++++..... ..++++++++|+.+...+. ...+...+...|..+|++.+.
T Consensus 83 y-~~~~p~~lK~~iD~~~~~~~--~~l~gK~~~~~~t~gg~~g-~~~~~~~l~~~l~~~g~~~~~ 143 (193)
T 1rtt_A 83 Y-NYSMAGVLKNAIDWASRPPE--QPFSGKPAAILGASAGRFG-TARAQYHLRQTLVFLDVHPLN 143 (193)
T ss_dssp E-TTEECHHHHHHHHHHTCSSS--CTTTTCEEEEEEECSSTTT-THHHHHHHHHHHHHHTCEECC
T ss_pred c-ccCcCHHHHHHHHHhccccC--cccCCCeEEEEEeCCCCCc-cHHHHHHHHHHHHHcCCEEcC
Confidence 9 78899999999999974211 3588999999998754443 235668899999999998776
No 71
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=98.79 E-value=3.9e-08 Score=92.84 Aligned_cols=115 Identities=10% Similarity=0.196 Sum_probs=88.0
Q ss_pred ceEEEEEeCCC--chHHHHHHHHHHHHHhhcCCceeEEEcCCCCCC-----c--------chHHHHhhccCCeEEEEEec
Q 007567 105 QKVTIFFGTQT--GTAEGFAKALADEARARYDKAIFKVVDIDDYAD-----E--------EDEYEEKLKKENIVFFFLAT 169 (598)
Q Consensus 105 ~~v~I~YgSqT--Gtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~-----~--------~~~~~~~l~~~~~vIf~~sT 169 (598)
|+|+|+|||.. |+|+.+|+.+++.+.. +++|+.+++. + -.++.+++.+.+.+||++|+
T Consensus 1 Mkilii~gS~~~~g~t~~la~~i~~~l~~-------~~i~l~~~~lp~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~tP~ 73 (174)
T 3gfs_A 1 MNMLVINGTPRKHGRTRIAASYIAALYHT-------DLIDLSEFVLPVFNGEAEQSELLKVQELKQRVTKADAIVLLSPE 73 (174)
T ss_dssp --CEEEECCCCTTCHHHHHHHHHHHHTTC-------EEEETTTSCCCCCCCCHHHHTCHHHHHHHHHHHHCSSEEEEEEC
T ss_pred CEEEEEECCCCCCCcHHHHHHHHHHhCcc-------eEEeeecCCCCCCCChhhccCcHHHHHHHHHHHHCCEEEEEcCC
Confidence 47999999998 9999999999987753 3556655432 1 11233467889999999999
Q ss_pred CCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEee-cCCcchhHhHHHHHHHHHHHhcCCeEee
Q 007567 170 YGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGL-GNRQYEHFNKIAKVVDEILANQGAKRLV 234 (598)
Q Consensus 170 yG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGL-Gds~Y~~Fn~~~k~ld~~L~~lGA~ri~ 234 (598)
| .|.+|...+.|++|+... .++|++.++||. |.. ..+..+...+...|..+|+..+-
T Consensus 74 y-~~~~p~~lk~~lD~l~~~-----~~~gK~~~~~~~sgg~--~g~~~a~~~l~~~l~~~g~~~v~ 131 (174)
T 3gfs_A 74 Y-HSGMSGALKNALDFLSSE-----QFKYKPVALLAVAGGG--DGGINALNNMRTVMRGVYANVIP 131 (174)
T ss_dssp S-SSSCCHHHHHHHHTCCHH-----HHTTCEEEEEEECCST--TCSHHHHHHHHHHHHHTTCEEEE
T ss_pred c-CCCCCHHHHHHHHHhCHh-----hhCCCcEEEEEECCCC--hhHHHHHHHHHHHHHHcCCEEec
Confidence 9 899999999999998642 588999999994 322 13456778999999999998664
No 72
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=98.79 E-value=6.6e-08 Score=92.41 Aligned_cols=121 Identities=15% Similarity=0.136 Sum_probs=95.3
Q ss_pred ceEEEEEeCCC--chHHHHHHHHHHHHHhhc----CCceeEEEcCCCCCC----------------------c-chHHHH
Q 007567 105 QKVTIFFGTQT--GTAEGFAKALADEARARY----DKAIFKVVDIDDYAD----------------------E-EDEYEE 155 (598)
Q Consensus 105 ~~v~I~YgSqT--Gtae~~A~~la~~l~~~~----~~~~~~v~dl~~~~~----------------------~-~~~~~~ 155 (598)
|+|+|+|||.. |+|+.+|+.+++.+.+.+ .+..++++|+.+++. + ..++.+
T Consensus 1 Mkilii~gS~r~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (191)
T 1t0i_A 1 MKVGIIMGSVRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSR 80 (191)
T ss_dssp CEEEEEECCCCSSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHHHCCCSSCCCCCSCGGGCCSGGGCSCHHHHHHHH
T ss_pred CeEEEEeCCCCCCCchHHHHHHHHHHHHHhhccCCCCceEEEEehhhcCCCCCCCccccccccccCcccCCcHHHHHHHH
Confidence 47999999998 999999999999998753 235678888765321 0 013446
Q ss_pred hhccCCeEEEEEecCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeec
Q 007567 156 KLKKENIVFFFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVP 235 (598)
Q Consensus 156 ~l~~~~~vIf~~sTyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~ 235 (598)
++...+.+||++|+| .|.+|...+.|++++.. .++++++++|+.|... . ..+...+...|..+|++.+..
T Consensus 81 ~l~~aD~iI~~sP~y-~~~~p~~lK~~iD~~~~------~l~gK~~~~~~~G~~~-~--~~~~~~l~~~l~~~G~~~~~~ 150 (191)
T 1t0i_A 81 IVNALDIIVFVTPQY-NWGYPAALKNAIDRLYH------EWHGKPALVVSYGGHG-G--SKCNDQLQEVLHGLKMNVIGG 150 (191)
T ss_dssp HHHTCSEEEEEEECB-TTBCCHHHHHHHHTCST------TTTTCEEEEEEEETTT-T--HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhCCEEEEEeceE-CCCCCHHHHHHHHHHHh------hcCCCEEEEEEeCCcc-h--hhHHHHHHHHHHHCCCEEcce
Confidence 788999999999999 78999999999988752 4889999999988743 2 346688899999999987654
No 73
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=98.72 E-value=4.7e-09 Score=105.45 Aligned_cols=90 Identities=18% Similarity=0.188 Sum_probs=67.5
Q ss_pred hhhHhhhcCC----CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCcchHHhhccCCCCCCCCCceEEEEEeCC
Q 007567 480 GVFFAAIVPR----LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS 555 (598)
Q Consensus 480 ~~ll~~i~p~----l~pR~YSIsSsp~~~~~~i~itv~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~~~i~v~~s 555 (598)
++++...+|. ...|.|||+|.+. ++++|.+.++. ..|..|+||.++.+|+ .+.|..+.+
T Consensus 42 GQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~~~--------~~G~~S~~l~~l~~Gd------~l~v~gP~G 104 (252)
T 2gpj_A 42 SAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVLHD--------TDGPASSWAKTAQVGE------LIQIGGPGL 104 (252)
T ss_dssp TCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEECCS--------SCCHHHHHHHHCCTTC------EEEEEEEEC
T ss_pred CCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEEeC--------CCCcHHHHHhhCCCCC------EEEEecCCC
Confidence 4555433442 4569999999764 56776665321 1389999999887764 577777889
Q ss_pred CccCCCCCCCcEEEEeCCCChHhHHHHHHHHh
Q 007567 556 NFKLPADAKVPIIMIGPGTGLAPFRGSWSRTG 587 (598)
Q Consensus 556 ~F~lp~~~~~PiImIg~GTGiAPfr~flqer~ 587 (598)
.|.++.+ ..+++|||.||||+|+++++++..
T Consensus 105 ~f~l~~~-~~~~lliagGtGitPi~s~l~~l~ 135 (252)
T 2gpj_A 105 KKLINFE-ADWFLLAGDMTALPAISVNLAKLP 135 (252)
T ss_dssp CCCCCSS-SSEEEEEEEGGGHHHHHHHHHHSC
T ss_pred CCcCCCC-CceEEEEcchhhHHHHHHHHHhCC
Confidence 9999764 479999999999999999999874
No 74
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=98.70 E-value=3.3e-07 Score=88.72 Aligned_cols=157 Identities=9% Similarity=0.032 Sum_probs=110.7
Q ss_pred CceEEEEEeCCC----chHHHHHHHHHHHHHhhcCCceeEEEcCC--CCCCcc---------------------------
Q 007567 104 KQKVTIFFGTQT----GTAEGFAKALADEARARYDKAIFKVVDID--DYADEE--------------------------- 150 (598)
Q Consensus 104 ~~~v~I~YgSqT----Gtae~~A~~la~~l~~~~~~~~~~v~dl~--~~~~~~--------------------------- 150 (598)
|++|+|+|||.. |+++.+|+.+.+.+++.++...++++||. +.+...
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLSAWGALRAGAAFETLSENQQQ 80 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTCGGGCCCCCCHHHHHHHHHHHHTCCGGGSCHHHHH
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeCCcccCCCCcCCHHHHHhhcCcccccccccCCHHHHh
Confidence 468999999987 99999999999999988755678899998 654210
Q ss_pred -----hHHHHhhccCCeEEEEEecCCCCCcchHHHHHHHHHHhhc--------CCCcccCCceEEEEeecCCcchhHhHH
Q 007567 151 -----DEYEEKLKKENIVFFFLATYGDGEPTDNAARFYKWFTEQK--------EGGEWLQKLKYGVFGLGNRQYEHFNKI 217 (598)
Q Consensus 151 -----~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~~L~~~~--------~~~~~l~~~~yaVFGLGds~Y~~Fn~~ 217 (598)
.++.+++...+.+||++|+| .|.+|.-.+.|++++.... .+...+++++..++......|.+-..+
T Consensus 81 ~~~~~~~~~~~l~~aD~iv~~~P~y-~~~~pa~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~~~~~~ 159 (208)
T 2hpv_A 81 KVARFNELTDQFLSADKVVIANPMW-NLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFA 159 (208)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESCCSCEEEEEEEESSCCCSCSHH
T ss_pred hHHHHHHHHHHHHhCCEEEEEeccc-cCCCCHHHHHHHHHHhcCCcEeecCCCCCccCCCCCeEEEEEecCCCCCCcchH
Confidence 11234677889999999999 8999999999999986411 011247899999997644445321334
Q ss_pred HHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHHHHHHHHHHh
Q 007567 218 AKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDN 262 (598)
Q Consensus 218 ~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~~ 262 (598)
...+...|.-+|++.+........+. .++...+|.++.-..+.+
T Consensus 160 ~~~l~~~~~~~G~~~~~~~~~~~~~~-~~~~~~~~l~~a~~~~~~ 203 (208)
T 2hpv_A 160 SQYIKAILNFIGVDQVDGLFIEGIDH-FPDRAEELLNTAMTKATE 203 (208)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEECTTT-CGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeeeEEEEccccC-CHHHHHHHHHHHHHHHHH
Confidence 56777888999998775554333232 235567777665554443
No 75
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=98.59 E-value=1.2e-06 Score=88.00 Aligned_cols=128 Identities=12% Similarity=0.036 Sum_probs=99.2
Q ss_pred ccCCceEEEEEeCCC--chHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCc---------chHHHHhhccCCeEEEEEec
Q 007567 101 DDGKQKVTIFFGTQT--GTAEGFAKALADEARARYDKAIFKVVDIDDYADE---------EDEYEEKLKKENIVFFFLAT 169 (598)
Q Consensus 101 ~~~~~~v~I~YgSqT--Gtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~---------~~~~~~~l~~~~~vIf~~sT 169 (598)
...+++|+|+|||.. |+++.+|+.+++.+.+.+ ..++++|+.+++.. -.++.+.+...+.+||++|+
T Consensus 31 ~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g--~eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~AD~iI~~sP~ 108 (247)
T 2q62_A 31 STHRPRILILYGSLRTVSYSRLLAEEARRLLEFFG--AEVKVFDPSGLPLPDAAPVSHPKVQELRELSIWSEGQVWVSPE 108 (247)
T ss_dssp CCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTT--CEEEECCCTTCCCTTSSCTTSHHHHHHHHHHHHCSEEEEEEEC
T ss_pred cCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCC--CEEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHHCCEEEEEeCC
Confidence 335689999999985 999999999999998754 57889999887521 12344678899999999999
Q ss_pred CCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEe
Q 007567 170 YGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 233 (598)
Q Consensus 170 yG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri 233 (598)
| .|.+|.-.+.|++|+.........++|++.++++.+-.. ... .+...+...|..+|+..+
T Consensus 109 Y-n~sipa~LKn~iD~l~~~~~~~~~l~gK~v~~v~tsG~~-gg~-~a~~~Lr~~l~~lg~~~v 169 (247)
T 2q62_A 109 R-HGAMTGIMKAQIDWIPLSTGSIRPTQGKTLAVMQVSGGS-QSF-NAVNQMRILGRWMRMITI 169 (247)
T ss_dssp S-SSSCCHHHHHHHHTSCSCBTTBCSSTTCEEEEEEECSSS-CCC-HHHHHHHHHHHHTTCEEC
T ss_pred C-CCCccHHHHHHHHHhhhccCcccccCCCEEEEEEeCCCc-cHH-HHHHHHHHHHHHCCCEEe
Confidence 9 899999999999998642111235899999999985332 222 456788899999999866
No 76
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=98.52 E-value=1.2e-06 Score=82.78 Aligned_cols=124 Identities=12% Similarity=0.109 Sum_probs=87.0
Q ss_pred CceEEEEEeCC--CchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCC------------------cchHHHHhhccCCeE
Q 007567 104 KQKVTIFFGTQ--TGTAEGFAKALADEARARYDKAIFKVVDIDDYAD------------------EEDEYEEKLKKENIV 163 (598)
Q Consensus 104 ~~~v~I~YgSq--TGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~------------------~~~~~~~~l~~~~~v 163 (598)
+++|+|+|||. +|+|+.+|+.+++.+ .++++|+.+++. +..++.+++.+.+.+
T Consensus 3 mMkilii~~S~r~~g~t~~la~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~i 75 (184)
T 1rli_A 3 AMKIAVINGGTRSGGNTDVLAEKAVQGF-------DAEHIYLQKYPIQPIEDLRHAQGGFRPVQDDYDSIIERILQCHIL 75 (184)
T ss_dssp --CEEEEESSCSSCCHHHHHHHHHHTTT-------CCEEEEC-----------------------CHHHHHHHHHTCSEE
T ss_pred CcEEEEEECCCCCCccHHHHHHHHHcCC-------eEEEEEcCCCCCccCCccccccCCCCCCCCCHHHHHHHHHhCCEE
Confidence 56899999996 499999999998754 245566655432 112234578899999
Q ss_pred EEEEecCCCCCcchHHHHHHHHHHhhcCC------CcccCCceEEEEeecCCcch-hHhHHHHHHHHHHHhcCCeEeec
Q 007567 164 FFFLATYGDGEPTDNAARFYKWFTEQKEG------GEWLQKLKYGVFGLGNRQYE-HFNKIAKVVDEILANQGAKRLVP 235 (598)
Q Consensus 164 If~~sTyG~Geppdna~~F~~~L~~~~~~------~~~l~~~~yaVFGLGds~Y~-~Fn~~~k~ld~~L~~lGA~ri~~ 235 (598)
||++|+| .|.+|...+.|++++...... ...+++++.++|+.+..... .+..+.+.+...|..+|++.+..
T Consensus 76 i~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~l~~~l~~~G~~~~~~ 153 (184)
T 1rli_A 76 IFATPIY-WFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDNPKIKGLPLIQQFEHIFHFMGMSFKGY 153 (184)
T ss_dssp EEEEECB-TTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESSCHHHHTHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEeCcc-ccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCCCCccchHHHHHHHHHHHHHcCCccceE
Confidence 9999999 899999999999988642110 01478999999998654321 23446688888999999987644
No 77
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=98.48 E-value=2.5e-06 Score=87.02 Aligned_cols=127 Identities=9% Similarity=-0.000 Sum_probs=98.7
Q ss_pred cCCceEEEEEeCCC--chHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCc----------chHHHHhhccCCeEEEEEec
Q 007567 102 DGKQKVTIFFGTQT--GTAEGFAKALADEARARYDKAIFKVVDIDDYADE----------EDEYEEKLKKENIVFFFLAT 169 (598)
Q Consensus 102 ~~~~~v~I~YgSqT--Gtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~----------~~~~~~~l~~~~~vIf~~sT 169 (598)
..+++|+|+|||.. |+++.+|+.+++.+.+.+ ..++++|+.+++.. -.++.+++...+.+||++|+
T Consensus 56 ~~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G--~eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~ADgiV~aSP~ 133 (279)
T 2fzv_A 56 APPVRILLLYGSLRARSFSRLAVEEAARLLQFFG--AETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQVWCSPE 133 (279)
T ss_dssp CSCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTT--CEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEEEEEEE
T ss_pred CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCC--CEEEEEehhcCCCCccCccCCCHHHHHHHHHHHHCCeEEEEcCc
Confidence 45789999999985 999999999999998754 57889999876521 12234677889999999999
Q ss_pred CCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEe
Q 007567 170 YGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 233 (598)
Q Consensus 170 yG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri 233 (598)
| .|.+|.-.+.|++|+.........+++++.++++.+-.. ..+ .+...+...|..+|+..+
T Consensus 134 Y-n~sipg~LKn~IDrl~~~~g~~~~l~gK~v~lv~tsG~~-gg~-~a~~~Lr~~l~~lg~~vv 194 (279)
T 2fzv_A 134 R-HGQITSVMKAQIDHLPLEMAGIRPTQGRTLAVMQVSGGS-QSF-NAVNTLRLLGRWMRMFTI 194 (279)
T ss_dssp E-TTEECHHHHHHHHHSCSCBTTBCSSTTCEEEEEEECSSS-CCC-HHHHHHHHHHHHTTCEEC
T ss_pred c-ccCcCHHHHHHHHHHhhhcccccccCCCEEEEEEECCCc-cHH-HHHHHHHHHHHhcCcEEe
Confidence 9 999999999999999642111235899999999985332 222 345788889999999866
No 78
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=98.45 E-value=4e-06 Score=80.66 Aligned_cols=126 Identities=12% Similarity=0.153 Sum_probs=96.0
Q ss_pred CceEEEEEeCC--CchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCc-----------chHHHHhhccCCeEEEEEecC
Q 007567 104 KQKVTIFFGTQ--TGTAEGFAKALADEARARYDKAIFKVVDIDDYADE-----------EDEYEEKLKKENIVFFFLATY 170 (598)
Q Consensus 104 ~~~v~I~YgSq--TGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~-----------~~~~~~~l~~~~~vIf~~sTy 170 (598)
|++|+|++||. .|+++.+|+.+.+.+. . +..++++|+.++..- -.++.+++...+.+||++|+|
T Consensus 2 M~kilii~gS~r~~s~t~~la~~~~~~~~-~--~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~AD~iV~~sP~y 78 (192)
T 3fvw_A 2 SKRILFIVGSFSEGSFNRQLAKKAETIIG-D--RAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQEADAIWIFSPVY 78 (192)
T ss_dssp -CEEEEEESCCSTTCHHHHHHHHHHHHHT-T--SSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHHCSEEEEECCCB
T ss_pred CCEEEEEEcCCCCCCHHHHHHHHHHHhcC-C--CCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHhCCEEEEECccc
Confidence 57899999998 7999999999999886 3 356888898775421 123456788999999999999
Q ss_pred CCCCcchHHHHHHHHHHhhcC-----CCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeec
Q 007567 171 GDGEPTDNAARFYKWFTEQKE-----GGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVP 235 (598)
Q Consensus 171 G~Geppdna~~F~~~L~~~~~-----~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~ 235 (598)
.|.+|.-.+.|++|+..... ....++|+++++++.+... .+..+...+...|..+|++.+-.
T Consensus 79 -~~~~p~~lK~~iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg~--g~~~~~~~l~~~l~~~G~~~v~~ 145 (192)
T 3fvw_A 79 -NYAIPGPVKNLLDWLSRSLDLSDPTGPSVLQDKIVTVSSVANGA--SPEEVFEDYRSLLPFIRMHLVDQ 145 (192)
T ss_dssp -TTBCCHHHHHHHHHHTSCSCSSCTTSCCTTTTCEEEEEEESCCC-----CCSHHHHHHHHHTTCEECCC
T ss_pred -ccCCCHHHHHHHHHhhccccccCCCCCccCCCCEEEEEEeCCCc--chhHHHHHHHHHHHHcCCeeecc
Confidence 89999999999999975210 1135899999999987652 22334577888999999997654
No 79
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=98.42 E-value=6.6e-06 Score=80.01 Aligned_cols=157 Identities=9% Similarity=0.044 Sum_probs=110.8
Q ss_pred CceEEEEEeCCCc---hHHHHHHHHHHHHHhhcCCceeEEEcCCCCCC---------------c-------------chH
Q 007567 104 KQKVTIFFGTQTG---TAEGFAKALADEARARYDKAIFKVVDIDDYAD---------------E-------------EDE 152 (598)
Q Consensus 104 ~~~v~I~YgSqTG---tae~~A~~la~~l~~~~~~~~~~v~dl~~~~~---------------~-------------~~~ 152 (598)
|++|+|+|||..+ ++..+|+.+.+.+++++++..++++||.+.+. . ..+
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQ 80 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEESSSSCCCCCCHHHHHHHTCSSGGGCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHHhhcCCcccCCHHHHHHHHHHHH
Confidence 5789999999765 69999999999999874446788999866531 0 112
Q ss_pred HHHhhccCCeEEEEEecCCCCCcchHHHHHHHHHHhhc-------C--C---CcccCCceEEEEeecC--Ccch-----h
Q 007567 153 YEEKLKKENIVFFFLATYGDGEPTDNAARFYKWFTEQK-------E--G---GEWLQKLKYGVFGLGN--RQYE-----H 213 (598)
Q Consensus 153 ~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~~L~~~~-------~--~---~~~l~~~~yaVFGLGd--s~Y~-----~ 213 (598)
+.+++...+.+||++|+| .+.+|.-.+.|++++.... . + ...|+|+++.++.... ..|. .
T Consensus 81 ~~~~l~~AD~iV~~~P~y-~~~~pa~lK~~iD~~~~~g~~f~~~~~~g~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~ 159 (212)
T 3r6w_A 81 LVGELFDSDLLVISTPMY-NFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQA 159 (212)
T ss_dssp HHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEEEECC-CEEEEECCCSCEEEEEEECSSSCCSTTCTTGG
T ss_pred HHHHHHhCCEEEEEcCcc-cccCCHHHHHHHHHHhhCCceeecccCCCCccccccCCCCEEEEEEecCCCCcCCCCCCCc
Confidence 335678899999999999 8999999999999994310 1 1 2358899998887633 2332 2
Q ss_pred HhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHHHHHHHHHHh
Q 007567 214 FNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDN 262 (598)
Q Consensus 214 Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~~ 262 (598)
+...-..+...|.-+|.+.+-.......+. .+++.++|.++....+.+
T Consensus 160 ~~~~~~~l~~~l~~~G~~~~~~v~~~g~~~-~~~~~~~~l~~a~~~~~~ 207 (212)
T 3r6w_A 160 MNHADPWLRTALGFIGIDEVTVVAAEGEES-GGRSFEDSCDEAEQRLLA 207 (212)
T ss_dssp GCCSHHHHHHHHHHHTCCEEEEEEECCTTT-CHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHCCCceeEEEEEecccC-CHHHHHHHHHHHHHHHHH
Confidence 344456778888889998875544332222 456677787776655544
No 80
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=98.40 E-value=1.3e-05 Score=78.86 Aligned_cols=157 Identities=13% Similarity=0.039 Sum_probs=113.6
Q ss_pred cCCceEEEEEeCC------CchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCc
Q 007567 102 DGKQKVTIFFGTQ------TGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEP 175 (598)
Q Consensus 102 ~~~~~v~I~YgSq------TGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Gep 175 (598)
..|++|+|++||. .+++..+|+.+.+.+.+.+ ..++++|+++ ..|-.+..+.+...+.+||.+|.| .+.+
T Consensus 23 ~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g--~ev~~~dL~~-~~Dv~~~~~~l~~aD~iv~~~P~y-~~~~ 98 (218)
T 3rpe_A 23 NAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESG--HQVKITTVDQ-GYDIESEIENYLWADTIIYQMPAW-WMGE 98 (218)
T ss_dssp -CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTT--CCEEEEEGGG-CCCHHHHHHHHHHCSEEEEEEECB-TTBC
T ss_pred ccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCC--CEEEEEECCC-ccCHHHHHHHHHhCCEEEEECChH-hccC
Confidence 3468999999997 4688999999999998765 4678899875 223233456788999999999999 8999
Q ss_pred chHHHHHHHHHHhhc-------------------CCCcccCCceEEEEeecCCcchh-------HhH-----HHHHHHHH
Q 007567 176 TDNAARFYKWFTEQK-------------------EGGEWLQKLKYGVFGLGNRQYEH-------FNK-----IAKVVDEI 224 (598)
Q Consensus 176 pdna~~F~~~L~~~~-------------------~~~~~l~~~~yaVFGLGds~Y~~-------Fn~-----~~k~ld~~ 224 (598)
|.-.+.|++++.... .+...|+|+++.|+-..+...+. |+. .-.-+...
T Consensus 99 p~~lK~~iD~v~~~g~af~y~~~g~~~~~p~~~yG~~glL~gKk~~li~T~G~p~~~y~~~g~~~~g~~~~~~l~p~~~~ 178 (218)
T 3rpe_A 99 PWILKKYIDEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKTYMLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHKA 178 (218)
T ss_dssp CHHHHHHHHHHHHHTBTTTBCCCSCCSTTTTSCTTCCBSCTTCEEEEEEECSSCTHHHHCTTSTTTTCHHHHHTHHHHHH
T ss_pred CHHHHHHHHHHHhcCcceeeccccccccccccccCCccCCCCCEEEEEEcCCCChHhhcccccccccCCHHHHHHHHHHH
Confidence 999999999875431 01235789998888765554322 332 11224677
Q ss_pred HHhcCCeEeecceeccCCCCchHHHHHHHHHHHHHHHhhh
Q 007567 225 LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLL 264 (598)
Q Consensus 225 L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~ 264 (598)
|.-+|.+.+-+....+... ++++++|.+++-..|.+++
T Consensus 179 l~f~G~~~l~~~~~~g~~~--~~~~~~~~~~~~~~L~~~~ 216 (218)
T 3rpe_A 179 NQFLGMKPLPTFMCNDVIK--QPDIEGDIARYRQHLAENV 216 (218)
T ss_dssp HHHTTCEECCCEEECSTTT--SCCHHHHHHHHHHHHHHHT
T ss_pred HHhCCCEEeceEEEeCCCC--hHHHHHHHHHHHHHHHHhc
Confidence 8888999887776665543 4578888888877777654
No 81
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=98.39 E-value=4.2e-06 Score=80.77 Aligned_cols=127 Identities=9% Similarity=0.113 Sum_probs=97.1
Q ss_pred cCCceEEEEEeCCC--chHHHHHHHHHH----HHHhhcCCceeEEEcCCCCCC------------c-chHHHHhhccCCe
Q 007567 102 DGKQKVTIFFGTQT--GTAEGFAKALAD----EARARYDKAIFKVVDIDDYAD------------E-EDEYEEKLKKENI 162 (598)
Q Consensus 102 ~~~~~v~I~YgSqT--Gtae~~A~~la~----~l~~~~~~~~~~v~dl~~~~~------------~-~~~~~~~l~~~~~ 162 (598)
..+++|+++.||-- |++..+|+.+.+ .+++++.+..++++||.+++. + -.++.+++...+.
T Consensus 9 ~~~~~il~i~GS~r~~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~~l~~~~~~~~~~~~~~~~~~~~~i~~AD~ 88 (191)
T 3k1y_A 9 SHMRTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIELSELIPDLMTAMTTRVHTTKLEEITSALSASDG 88 (191)
T ss_dssp CCSEEEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHTTTTSSSCCCHHHHHHHHHHHHCSE
T ss_pred hhhceEEEEECCCCCCCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhCCCcccChhhcCCCCHHHHHHHHHHHHCCE
Confidence 45789999999974 899999999999 666665456788888876542 1 1124467788999
Q ss_pred EEEEEecCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeec
Q 007567 163 VFFFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVP 235 (598)
Q Consensus 163 vIf~~sTyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~ 235 (598)
+||++|+| .|.+|.-.+.|++|+.. ..++|++.++++.|.. +.+....-..+...|..+|+..+-+
T Consensus 89 ivi~sP~Y-~~~~~~~lK~~iD~~~~-----~~l~gK~~~~v~t~G~-~~~~~~~~~~L~~il~~lg~~vv~~ 154 (191)
T 3k1y_A 89 LVVATPVF-KASYTGLFKMFFDILDT-----DALTGMPTIIAATAGS-ARHSLVLDYALRPLLSYMRAVVVPT 154 (191)
T ss_dssp EEEEEECB-TTBSCHHHHHHHHHSCT-----TTTTTCEEEEEEEESS-STTTTHHHHTHHHHHHHTTCEECSC
T ss_pred EEEEcCcc-CCcCcHHHHHHHHHhhh-----hhcCCCEEEEEEeCCC-cchhhHHHHHHHHHHHHCCCEEcCc
Confidence 99999999 99999999999999864 3689999999998743 3333333344888899999987633
No 82
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=98.34 E-value=1.1e-05 Score=78.07 Aligned_cols=124 Identities=10% Similarity=0.107 Sum_probs=95.6
Q ss_pred CceEEEEEeC--CCchHHHHHHHHHHHHHhhcCCceeE-EEcCCCCCC------------cchHHHHhhccCCeEEEEEe
Q 007567 104 KQKVTIFFGT--QTGTAEGFAKALADEARARYDKAIFK-VVDIDDYAD------------EEDEYEEKLKKENIVFFFLA 168 (598)
Q Consensus 104 ~~~v~I~YgS--qTGtae~~A~~la~~l~~~~~~~~~~-v~dl~~~~~------------~~~~~~~~l~~~~~vIf~~s 168 (598)
+++|++++|| ..|+++.+|+.+++.+. . +..++ ++||.++.. +-.++.+.+...+.+||++|
T Consensus 6 ~mkIl~I~GS~r~~s~t~~la~~~~~~~~-~--g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~~~~i~~AD~iVi~tP 82 (199)
T 4hs4_A 6 PLHFVTLLGSLRKASFNAAVARALPEIAP-E--GIAITPLGSIGTFPHYSQDVQEEGFPAPVLTMAQQIATADAVVIVTP 82 (199)
T ss_dssp CEEEEEEECCCSTTCHHHHHHHHHHHHCC-T--TEEEEECCCGGGSCCCCHHHHHHCCCHHHHHHHHHHHHSSEEEEEEC
T ss_pred CCEEEEEEcCCCCCChHHHHHHHHHHHcc-C--CCEEEEEEehhhcCCCCccccccCCCHHHHHHHHHHHhCCEEEEEcC
Confidence 3689999999 67999999999988774 2 35677 788866532 11123456788999999999
Q ss_pred cCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEee
Q 007567 169 TYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 234 (598)
Q Consensus 169 TyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~ 234 (598)
+| +|..|.-.+.|++|+... ....+.|+++++++.+-..+... .+...+...|..+|+..+-
T Consensus 83 ~Y-~~s~p~~LK~~iD~~~~~--~~~~l~gK~v~~v~tsgg~~g~~-~a~~~Lr~il~~lg~~~v~ 144 (199)
T 4hs4_A 83 EY-NYSVPGVLKNAIDWLSRV--SPQPLAGKPVALVTASPGMIGGA-RAQNHLRQSLVFLDAYVLN 144 (199)
T ss_dssp CB-TTBCCHHHHHHHHHHTTS--SSCTTTTCEEEEEEECSSSSCSH-HHHHHHHHHHHHTTCEECC
T ss_pred cc-CCCcCHHHHHHHHHhccc--CCcccCCCEEEEEEeCCCCcccH-HHHHHHHHHHHHcCCEEcC
Confidence 99 899999999999999752 23468999999999865555433 2457888999999998774
No 83
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=98.32 E-value=6.4e-06 Score=79.48 Aligned_cols=156 Identities=13% Similarity=0.072 Sum_probs=113.6
Q ss_pred ceEEEEEeCC--CchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCC-------------------cchHHHHhhccCCeE
Q 007567 105 QKVTIFFGTQ--TGTAEGFAKALADEARARYDKAIFKVVDIDDYAD-------------------EEDEYEEKLKKENIV 163 (598)
Q Consensus 105 ~~v~I~YgSq--TGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~-------------------~~~~~~~~l~~~~~v 163 (598)
|+|+|++||- .+++..+|+.+.+.+ +.+ ..++++||.+... +-.++.+++...+.+
T Consensus 1 MkiLiI~gspr~~s~t~~l~~~~~~~~-~~g--~~v~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~i 77 (196)
T 3lcm_A 1 MKILIVYTHPNPTSFNAEILKQVQTNL-SKE--HTVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEMEKYRDLVTWADHL 77 (196)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHS-CTT--SEEEEEETTTTTCCCCCCCCSSSCGGGGGGCGGGHHHHHHHHHCSEE
T ss_pred CEEEEEEeCCCCCChHHHHHHHHHHHh-cCC--CeEEEEEcccCCCCccCChHHHHhhcCCCCcHHHHHHHHHHHhCCEE
Confidence 5799999996 457899999998888 443 5688899876532 123345678889999
Q ss_pred EEEEecCCCCCcchHHHHHHHHHHhhc------C--CCcccCCceEEEEeecCCc--chhH--hHHHHHHHHHHHhcCCe
Q 007567 164 FFFLATYGDGEPTDNAARFYKWFTEQK------E--GGEWLQKLKYGVFGLGNRQ--YEHF--NKIAKVVDEILANQGAK 231 (598)
Q Consensus 164 If~~sTyG~Geppdna~~F~~~L~~~~------~--~~~~l~~~~yaVFGLGds~--Y~~F--n~~~k~ld~~L~~lGA~ 231 (598)
||++|.| .+.+|.-.+.|++++.... . +...|+|+++.|+..+... |..+ ......+...|.-+|++
T Consensus 78 V~~~P~y-~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~y~~~~~~~~~~~l~~~l~~~G~~ 156 (196)
T 3lcm_A 78 IFIFPIW-WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNTPSFAMPFVQDYGKVLKKQILKPCAIS 156 (196)
T ss_dssp EEEEECB-TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSSCGGGTTTSSCTTHHHHHHTTGGGTCC
T ss_pred EEECchh-hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCCchhhHhhhccCHHHHHHHHHHhcCCc
Confidence 9999999 8999999999999985321 0 1135899999999887666 4211 11124566667778999
Q ss_pred EeecceeccCCCCchHHHHHHHHHHHHHHHhhh
Q 007567 232 RLVPVGLGDDDQCIEDDFSAWRELVWPELDNLL 264 (598)
Q Consensus 232 ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~ 264 (598)
.+-....+..+...++...+|.+++-....+.+
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~ 189 (196)
T 3lcm_A 157 PVKLTELTSIEKISDDERQKLLHKVAQITRNIL 189 (196)
T ss_dssp CEEEEEECSTTTSCHHHHHHHHHHHHHHHHTCC
T ss_pred eeeEEEEeCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 877766665555567889999999887777665
No 84
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=98.22 E-value=5.2e-05 Score=73.58 Aligned_cols=150 Identities=12% Similarity=0.082 Sum_probs=105.0
Q ss_pred CCceEEEEEeCCC------chHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcc
Q 007567 103 GKQKVTIFFGTQT------GTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPT 176 (598)
Q Consensus 103 ~~~~v~I~YgSqT------Gtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Gepp 176 (598)
+..+|+|+.||-- ++++.+|+.+.+.+++.+ ..++++||.+ +.+-.++.+.+...+.+||++|.| .+.+|
T Consensus 11 ~~~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~g--~~v~~~dL~~-~~d~~~~~~~l~~AD~iV~~~P~y-~~s~p 86 (204)
T 2amj_A 11 GSSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLG--HDVRIVRADS-DYDVKAEVQNFLWADVVIWQMPGW-WMGAP 86 (204)
T ss_dssp -CCEEEEEECCC------CHHHHHHHHHHHHHHHHTT--CEEEEEESSS-CCCHHHHHHHHHHCSEEEEEEECB-TTBCC
T ss_pred CCcCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHcC--CEEEEEeCCc-cccHHHHHHHHHhCCEEEEECCcc-ccCCC
Confidence 4678999999988 899999999999998774 5688999975 223334557889999999999999 89999
Q ss_pred hHHHHHHHHHHhhc-------------------CCCcccCCceEEEEeecCCcchhH-------h-----HHHHHHHHHH
Q 007567 177 DNAARFYKWFTEQK-------------------EGGEWLQKLKYGVFGLGNRQYEHF-------N-----KIAKVVDEIL 225 (598)
Q Consensus 177 dna~~F~~~L~~~~-------------------~~~~~l~~~~yaVFGLGds~Y~~F-------n-----~~~k~ld~~L 225 (598)
.-.+.|++.+.... .+...++++++.++.......+.| + .+...+...|
T Consensus 87 a~LK~~iDrv~~~g~~~~y~~~~~~~~~~~~~~g~~~~l~gK~~~~i~t~g~~~~~y~~~g~~~~~~~~~~~l~~l~~~l 166 (204)
T 2amj_A 87 WTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKAN 166 (204)
T ss_dssp HHHHHHHHHHHHHTBTTTBSSSCC-------CTTCCBSCTTCEEEEEEECSSCTHHHHCTTSSSCSCCHHHHTHHHHHHH
T ss_pred HHHHHHHHHHhhcCcceeeccCcccccccccccCcccccCCCeEEEEEeCCCChHHHccCcccccCCCHHHHHHHHHHHH
Confidence 99999999754210 012358899999998765543222 1 2223467788
Q ss_pred HhcCCeEeecceeccCCC--CchHHHHHHHHHH
Q 007567 226 ANQGAKRLVPVGLGDDDQ--CIEDDFSAWRELV 256 (598)
Q Consensus 226 ~~lGA~ri~~~g~gD~~~--~~e~~f~~W~~~l 256 (598)
.-+|++.+-+....+.+. ..++.++++++.+
T Consensus 167 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 199 (204)
T 2amj_A 167 QFLGMEPLPTFIANDVIKMPDVPRYTEEYRKHL 199 (204)
T ss_dssp HHTTCEECCCEEECSTTTSCCTTTHHHHHHHHH
T ss_pred HHcCCeecceEEEeCCCCcHHHHHHHHHHHHHH
Confidence 889999876655443322 3455555555443
No 85
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=98.22 E-value=2.4e-05 Score=76.28 Aligned_cols=157 Identities=11% Similarity=0.100 Sum_probs=112.0
Q ss_pred CceEEEEEeCCC----chHHHHHHHHHHHHHhhcCCceeEEEcCCCCCC---c--------------------------c
Q 007567 104 KQKVTIFFGTQT----GTAEGFAKALADEARARYDKAIFKVVDIDDYAD---E--------------------------E 150 (598)
Q Consensus 104 ~~~v~I~YgSqT----Gtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~---~--------------------------~ 150 (598)
|++|+|++||-- +++..+|+.+.+.+++++++..++++||.+++. + -
T Consensus 4 M~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (211)
T 3p0r_A 4 MTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLYKEELPYVGVDMINGTFKAGKGFDLTEEEAKAVAVA 83 (211)
T ss_dssp CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGGGSCCCCCCHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred cCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHhhhccCccccCCHHHHhhHHHH
Confidence 579999999954 889999999999999875557788999976432 0 0
Q ss_pred hHHHHhhccCCeEEEEEecCCCCCcchHHHHHHHHHHhhc--------CCCcccCCceEEEEeecCCcchh-----HhHH
Q 007567 151 DEYEEKLKKENIVFFFLATYGDGEPTDNAARFYKWFTEQK--------EGGEWLQKLKYGVFGLGNRQYEH-----FNKI 217 (598)
Q Consensus 151 ~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~~L~~~~--------~~~~~l~~~~yaVFGLGds~Y~~-----Fn~~ 217 (598)
.++.+++...+.+||++|.| .+.+|.-.+.|++++.... .....|+|+++.++..-...|.. |...
T Consensus 84 ~~~~~~~~~aD~iv~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~~~~~~~~~~~~ 162 (211)
T 3p0r_A 84 DKYLNQFLEADKVVFGFPLW-NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMA 162 (211)
T ss_dssp HHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCCSSSTTGGGCBS
T ss_pred HHHHHHHHhCCEEEEEcChh-cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCCCCCCccchhHH
Confidence 12234577889999999999 8999999999999985321 01225889999988864344532 3444
Q ss_pred HHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHHHHHHHHHHh
Q 007567 218 AKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDN 262 (598)
Q Consensus 218 ~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~~ 262 (598)
-..+...|.-+|++.+........+.. .+.-++|.++....+.+
T Consensus 163 ~~~l~~~l~~~G~~~v~~i~~~g~~~~-~~~~~~~l~~a~~~~~~ 206 (211)
T 3p0r_A 163 VKYVASMMGFFGATNMETVVIEGHNQF-PDKAEEIITAGLEEAAK 206 (211)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEECTTTS-GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeeeEEEEeccccC-chHHHHHHHHHHHHHHH
Confidence 567788888899987655443333332 44677888776666554
No 86
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=98.20 E-value=3.4e-05 Score=78.35 Aligned_cols=159 Identities=13% Similarity=-0.017 Sum_probs=108.5
Q ss_pred CceEEEEEeCCC--chHHHHHHHHHHHHHhhcCCceeEEEcCCCCCC---------------------------------
Q 007567 104 KQKVTIFFGTQT--GTAEGFAKALADEARARYDKAIFKVVDIDDYAD--------------------------------- 148 (598)
Q Consensus 104 ~~~v~I~YgSqT--Gtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~--------------------------------- 148 (598)
|++|+|+|||.. |++..+|+.+.+.+++.+ ..++++||.+...
T Consensus 2 MmkiLiI~gSpr~~s~t~~la~~~~~~l~~~g--~eV~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (273)
T 1d4a_A 2 GRRALIVLAHSERTSFNYAMKEAAAAALKKKG--WEVVESDLYAMNFNPIISRKDITGKLKDPANFQYPAESVLAYKEGH 79 (273)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTT--CEEEEEETTTTTCCCCCCGGGBCSCCSSTTSCCHHHHHHHHHHHTC
T ss_pred CCEEEEEEeCCCCccHHHHHHHHHHHHHHhCC--CeEEEEEccccCCCCcCCHHHHHhhccCcccccchhhhhhhhhccc
Confidence 579999999976 689999999999998764 5678899876542
Q ss_pred --cc-hHHHHhhccCCeEEEEEecCCCCCcchHHHHHHHHHHhhcC--------CCcccCCceEEEEeecCCc---chh-
Q 007567 149 --EE-DEYEEKLKKENIVFFFLATYGDGEPTDNAARFYKWFTEQKE--------GGEWLQKLKYGVFGLGNRQ---YEH- 213 (598)
Q Consensus 149 --~~-~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~~L~~~~~--------~~~~l~~~~yaVFGLGds~---Y~~- 213 (598)
++ .+..+++...+.+||++|.| .+.+|.-.+.|++++..... +...|+|+++.++...... |.+
T Consensus 80 ~~dd~~~~~~~l~~AD~IV~~~P~y-~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg~~~~y~~~ 158 (273)
T 1d4a_A 80 LSPDIVAEQKKLEAADLVIFQFPLQ-WFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQ 158 (273)
T ss_dssp BCHHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSSCTGGGSTT
T ss_pred CcHHHHHHHHHHHhCCEEEEECchh-hccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCCChHHhccc
Confidence 01 11224578899999999999 89999999999999853210 1235889999988874444 421
Q ss_pred -Hh----HHHHHHH-HHHHhcCCeEeecceeccCCCCchHHHHHHHHHHHHHHHhhhC
Q 007567 214 -FN----KIAKVVD-EILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLR 265 (598)
Q Consensus 214 -Fn----~~~k~ld-~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~~ 265 (598)
++ .....+. ..|.-+|++.+-+...+......++...+|.++....+.++..
T Consensus 159 g~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~l~~ 216 (273)
T 1d4a_A 159 GIHGDMNVILWPIQSGILHFCGFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWD 216 (273)
T ss_dssp BTTCCHHHHHHHHHTTTTGGGTCEECCCEEETTGGGSCHHHHHHHHHHHHHHHTTGGG
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCeeeeEEEEeccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 1222222 3556779987765544433333355677777777777766653
No 87
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=98.17 E-value=2.2e-05 Score=75.70 Aligned_cols=157 Identities=11% Similarity=0.034 Sum_probs=105.9
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCC----CcchHHHHhhccCCeEEEEEecCCCCCcchHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYA----DEEDEYEEKLKKENIVFFFLATYGDGEPTDNA 179 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~----~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna 179 (598)
|++|+|++||..++...+++.+.+.+++.+ ..++++||.+.. .+-.+..+++...+.+||++|.| .+.+|.-.
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g--~ev~~~dL~~~~~~~~~dv~~~~~~l~~AD~iv~~~P~y-~~~~pa~l 77 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHT--DRFTVHELYAVYPQGKIDVAAEQKLIETHDSLVWQFPIY-WFNCPPLL 77 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCT--TTEEEEEHHHHCTTCCCCHHHHHHHHHTSSSEEEEEECB-TTBCCHHH
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCC--CeEEEEEchhcCCCCchhHHHHHHHHHhCCEEEEEcChh-hcCCCHHH
Confidence 578999999998875578999999887654 457888886432 22333456788999999999999 89999999
Q ss_pred HHHHHHHHhhc----CCCcccCCceEEEEeecCCcchhH----------hHHHHHHHHHHHhcCCeEeecceeccCCCC-
Q 007567 180 ARFYKWFTEQK----EGGEWLQKLKYGVFGLGNRQYEHF----------NKIAKVVDEILANQGAKRLVPVGLGDDDQC- 244 (598)
Q Consensus 180 ~~F~~~L~~~~----~~~~~l~~~~yaVFGLGds~Y~~F----------n~~~k~ld~~L~~lGA~ri~~~g~gD~~~~- 244 (598)
+.|++++.... ..+..|+|+++.++.......+.| ...-+-+...|.-+|.+.+-+....+....
T Consensus 78 K~~iDrv~~~g~~y~~~g~~l~gK~~~~~~t~G~~~~~y~~~g~~~~~~~~~l~pl~~~~~f~G~~~~~~~~~~g~~~~~ 157 (192)
T 3f2v_A 78 KQWLDEVLTYGWAYGSKGKALKGRKIALAVSLGAPAADYRADGAVGCSVAEVLRPFELTAKYCNADYRPPFTFHTIDSNA 157 (192)
T ss_dssp HHHHHHHSCBTTTBSSSCCSSTTCEEEEEEEESSCGGGSSTTSSSCSCHHHHHHHHHHHHHHTTCEECCCEEEEC-----
T ss_pred HHHHHHHhhcCccccCCCCCCCCCEEEEEEeCCCChHhhccCCccccCHHHHHHHHHHHHHhCCCeEeeeEEEecccccc
Confidence 99999875321 112468999999988755542222 233344667888899998776655544321
Q ss_pred -----chHHHHHHHHHHHHHHHhh
Q 007567 245 -----IEDDFSAWRELVWPELDNL 263 (598)
Q Consensus 245 -----~e~~f~~W~~~l~~~L~~~ 263 (598)
.++++++..++....|.+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~~~l~~~ 181 (192)
T 3f2v_A 158 GYSEAARQEVERSARDYLAWLDAL 181 (192)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHHH
Confidence 2445555555544445443
No 88
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=98.15 E-value=4.4e-05 Score=75.53 Aligned_cols=159 Identities=15% Similarity=0.091 Sum_probs=111.9
Q ss_pred CceEEEEEeCCC--chHHHHHHHHHHHHHhhcCCceeEEEcCCCCCC---------------------------------
Q 007567 104 KQKVTIFFGTQT--GTAEGFAKALADEARARYDKAIFKVVDIDDYAD--------------------------------- 148 (598)
Q Consensus 104 ~~~v~I~YgSqT--Gtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~--------------------------------- 148 (598)
.|+|+|++||.. |++..+|+.+.+.+++.+ ..++++||.+.+.
T Consensus 1 ~mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g--~ev~~~dL~~~~~~P~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 78 (228)
T 3tem_A 1 GKKVLIVYAHQEPKSFNGSLKNVAVDELSRQG--CTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRS 78 (228)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHHT--CEEEEEETTTTTCCCCCCGGGBCSCCSCTTSCCHHHHHHHHHHHTC
T ss_pred CCEEEEEEeCCCCCCHHHHHHHHHHHHHHHCC--CEEEEEEhhhcCCcccCCHHHHhhhccccccccchhhhhhhhhcCC
Confidence 368999999975 459999999999998875 5688999976431
Q ss_pred --cc-hHHHHhhccCCeEEEEEecCCCCCcchHHHHHHHHHHhhcC--------CCcccCCceEEEEeecCCc---chh-
Q 007567 149 --EE-DEYEEKLKKENIVFFFLATYGDGEPTDNAARFYKWFTEQKE--------GGEWLQKLKYGVFGLGNRQ---YEH- 213 (598)
Q Consensus 149 --~~-~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~~L~~~~~--------~~~~l~~~~yaVFGLGds~---Y~~- 213 (598)
++ .+..+.+...+.+||++|.| .+.+|.-.+.|++++..... ....|+|+++.++...... |..
T Consensus 79 ~~dd~~~~~~~l~~aD~iv~~~P~y-~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~~~~~y~~~ 157 (228)
T 3tem_A 79 LASDITDEQKKVREADLVIFQFPLY-WFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKT 157 (228)
T ss_dssp BCHHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSSCTTTTSTT
T ss_pred CcHHHHHHHHHHHhCCEEEEECChh-hcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCCCHHHHhhc
Confidence 01 01234577889999999999 89999999999999853210 1136899999998764443 421
Q ss_pred -HhHHHHH----HH-HHHHhcCCeEeecceeccCCCCchHHHHHHHHHHHHHHHhhhC
Q 007567 214 -FNKIAKV----VD-EILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLR 265 (598)
Q Consensus 214 -Fn~~~k~----ld-~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~~ 265 (598)
++...+. +. ..|.-+|.+.+-+....+.....++...+|.+++...|..+..
T Consensus 158 g~~~~~~~~l~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 215 (228)
T 3tem_A 158 GVNGDSRYFLWPLQHGTLHFCGFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWK 215 (228)
T ss_dssp STTCCHHHHHHHHHCCCCCTTTCEECCCEEECCTTTSCHHHHHHHHHHHHHHHHTGGG
T ss_pred cccCCHHHHHHHHHHHHHHhCCceEcCeEEEcCCCCCCHHHHHHHHHHHHHHHHhhcc
Confidence 2222222 11 1233468887766666666666788899999998888887664
No 89
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=97.35 E-value=4.7e-07 Score=87.88 Aligned_cols=125 Identities=10% Similarity=0.085 Sum_probs=93.6
Q ss_pred CceEEEEEeCCC--chHHHHHHHHHHHHHhhcCCceeEEE-cCCCCC---Cc---------chHHHHhhccCCeEEEEEe
Q 007567 104 KQKVTIFFGTQT--GTAEGFAKALADEARARYDKAIFKVV-DIDDYA---DE---------EDEYEEKLKKENIVFFFLA 168 (598)
Q Consensus 104 ~~~v~I~YgSqT--Gtae~~A~~la~~l~~~~~~~~~~v~-dl~~~~---~~---------~~~~~~~l~~~~~vIf~~s 168 (598)
+++|+|+|||.. |+++.+|+.+++.+.+ + ..++++ |+.++. .+ -.++.+++...+.+||++|
T Consensus 6 ~mkIliI~gS~r~~s~t~~la~~~~~~~~~-g--~~v~~i~dl~~lp~~~~~~~~~~~~~~~~~~~~~i~~AD~iIi~tP 82 (199)
T 3s2y_A 6 PLHFVTLLGSLRKASFNAAVARALPEIAPE-G--IAITPLGSIGTFPHYSQDVQEEGFPAPVLTMAQQIATADAVVIVTP 82 (199)
Confidence 478999999986 8999999999998875 3 456778 776621 11 1123356778899999999
Q ss_pred cCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeec
Q 007567 169 TYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVP 235 (598)
Q Consensus 169 TyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~ 235 (598)
+| .|.+|.-.+.|++|+.... ...++|+++++|+.+...+. ...+...+...|..+|+..+-.
T Consensus 83 ~Y-~~s~p~~lK~~iD~l~~~~--~~~l~gK~v~~v~tsgg~~g-~~~a~~~Lr~~l~~lg~~~v~~ 145 (199)
T 3s2y_A 83 EY-NYSVPGVLKNAIDWLSRVS--PQPLAGKPVALVTASPGMIG-GARAQYHLRQSLVFLDAYVLNR 145 (199)
Confidence 99 8999999999999997531 11589999999996433333 3345678888888899887643
No 90
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=98.04 E-value=0.00016 Score=71.13 Aligned_cols=161 Identities=11% Similarity=0.039 Sum_probs=115.3
Q ss_pred CCceEEEEEeCC-----CchHHHHHHHHHHHHHhhcCCc-eeEEEcCCCCCCc--c------------------------
Q 007567 103 GKQKVTIFFGTQ-----TGTAEGFAKALADEARARYDKA-IFKVVDIDDYADE--E------------------------ 150 (598)
Q Consensus 103 ~~~~v~I~YgSq-----TGtae~~A~~la~~l~~~~~~~-~~~v~dl~~~~~~--~------------------------ 150 (598)
.|++|+|++||- .+++..+++.+.+.+++++++. .++++||.+++.. +
T Consensus 3 ~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~idL~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (223)
T 3u7i_A 3 AMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQINLYDDVVPMIDKTVLSAWEKQGNGQELTREEQKVT 82 (223)
T ss_dssp CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEETTTSCCCCCCHHHHHHHHHHTTTCCCCHHHHHHH
T ss_pred ccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEECcCCCCCCCCHHHHHHhhccccccccCHHHHHHH
Confidence 368999999994 6899999999999999886556 7899999765320 0
Q ss_pred ---hHHHHhhccCCeEEEEEecCCCCCcchHHHHHHHHHHhhc------C--CCccc-CCceEEEEeecCCcc------h
Q 007567 151 ---DEYEEKLKKENIVFFFLATYGDGEPTDNAARFYKWFTEQK------E--GGEWL-QKLKYGVFGLGNRQY------E 212 (598)
Q Consensus 151 ---~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~~L~~~~------~--~~~~l-~~~~yaVFGLGds~Y------~ 212 (598)
.++.+++...+.+||++|.| .+.+|.-.+.|++|+.... . +...+ ++++..|+..-...| .
T Consensus 83 d~~~~l~~~~~~aD~iv~~~P~y-~~~~p~~lK~~iD~~~~~g~~f~~~~~g~~~~l~~gK~~~~i~t~gg~~~~~~~~~ 161 (223)
T 3u7i_A 83 ERMSEILQQFKSANTYVIVLPLH-NFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGIYTNDDWYT 161 (223)
T ss_dssp HHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEECSSCEEESCCSSCEEEEEEECSSCCSSSSHHH
T ss_pred HHHHHHHHHHHhCCEEEEEcChh-hccCCHHHHHHHHHHhhcCCceecCCCCCcccccCCCEEEEEEeCCCCCCCCCccc
Confidence 11234667889999999999 8999999999999986421 0 01235 789988887643444 2
Q ss_pred hHhHHHHHHHHHHHhcCCeEeecceeccC-CCCchHHHHHHHHHHHHHHHhhh
Q 007567 213 HFNKIAKVVDEILANQGAKRLVPVGLGDD-DQCIEDDFSAWRELVWPELDNLL 264 (598)
Q Consensus 213 ~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~-~~~~e~~f~~W~~~l~~~L~~~~ 264 (598)
.+......+...|.-+|++.+..+..... ....++.++++.+++-...++..
T Consensus 162 ~~~~~~~~l~~~l~~~G~~~~~~i~~~g~~~~~~~~~~~~a~~~~~~~~~~f~ 214 (223)
T 3u7i_A 162 DVEYSHKYLKAMFNFLGIEDYQIVRAQGTAVLDPTEVLQNAYKEVEEAASRLA 214 (223)
T ss_dssp HTCHHHHHHHHHHHHHTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCceeEEEEEcCccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34455677888898899997755433222 22467778888887766655543
No 91
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=97.95 E-value=0.0003 Score=67.68 Aligned_cols=124 Identities=14% Similarity=0.194 Sum_probs=90.0
Q ss_pred CceEEEEEeCC--CchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCC---cc--------hHHHHhhccCCeEEEEEecC
Q 007567 104 KQKVTIFFGTQ--TGTAEGFAKALADEARARYDKAIFKVVDIDDYAD---EE--------DEYEEKLKKENIVFFFLATY 170 (598)
Q Consensus 104 ~~~v~I~YgSq--TGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~---~~--------~~~~~~l~~~~~vIf~~sTy 170 (598)
+++|.|+.||. ...++++|+.+++.+.+ +..++++|+.++.. +. ..+.+.+...+.+||++|.|
T Consensus 2 ~k~I~vi~GS~R~~S~~~~la~~~~~~~~~---~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~aD~~ii~tPeY 78 (190)
T 3u7r_A 2 VKTVAVMVGSLRKDSLNHKLMKVLQKLAEG---RLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLAITPEY 78 (190)
T ss_dssp CEEEEEEESCCSTTCHHHHHHHHHHHHHTT---TEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHTSSEEEEECCCB
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHhccC---CCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHhCCcEEEechhh
Confidence 56899999994 56688899888776643 35678888876432 11 11234667889999999999
Q ss_pred CCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEe
Q 007567 171 GDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 233 (598)
Q Consensus 171 G~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri 233 (598)
+|..|.-.+.|++|+.... ....+.++.++++|.+-..+... .+...+...|..+|+..+
T Consensus 79 -n~s~pg~LKn~iDwlsr~~-~~~~~~gKpv~~v~~S~G~~Gg~-~a~~~Lr~vl~~lg~~v~ 138 (190)
T 3u7r_A 79 -NRSYPGMIKNAIDWATRPY-GQNSWKGKPAAVIGTSPGVIGAA-LAQARLKNDLLHVGTVMM 138 (190)
T ss_dssp -TTBCCHHHHHHHHHHHCST-TCCTTTTCEEEEEEEESSTTTTH-HHHHHHHHHHHTTTCEEC
T ss_pred -cccCCHHHHHHHHHhcccc-cCCccCCCEEEEEEeCCchhhHH-HHHHHHHHHHHHcCCEEc
Confidence 8999999999999996421 12468999999998644444333 234567788899999765
No 92
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=97.94 E-value=0.00016 Score=69.50 Aligned_cols=155 Identities=12% Similarity=0.069 Sum_probs=103.2
Q ss_pred CCceEEEEEeCC--CchHHHHHHHHHHHHHhhcCCceeE-EEcCCCCCCc-------------chHHHHhhccCCeEEEE
Q 007567 103 GKQKVTIFFGTQ--TGTAEGFAKALADEARARYDKAIFK-VVDIDDYADE-------------EDEYEEKLKKENIVFFF 166 (598)
Q Consensus 103 ~~~~v~I~YgSq--TGtae~~A~~la~~l~~~~~~~~~~-v~dl~~~~~~-------------~~~~~~~l~~~~~vIf~ 166 (598)
.+++|++++||- .+++..+|+.+.+.+ .. +..++ ++|+.++..- -.++.+.+...+.+||+
T Consensus 3 ~~mkil~I~GS~r~~s~t~~l~~~~~~~~-~~--g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~l~~~i~~AD~iv~~ 79 (193)
T 3svl_A 3 EKLQVVTLLGSLRKGSFNGMVARTLPKIA-PA--SMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIV 79 (193)
T ss_dssp -CEEEEEEECCCSTTCHHHHHHHHGGGTS-CT--TEEEEECCCSTTCCCCCHHHHHHTCSCHHHHHHHHHHHHSSEEEEE
T ss_pred CCCEEEEEEccCCCCCHHHHHHHHHHHHc-cC--CCEEEEEEeHHHCCCCCcccccccCCCHHHHHHHHHHHHCCEEEEE
Confidence 357899999995 588888888876533 22 35567 7788765321 11234567889999999
Q ss_pred EecCCCCCcchHHHHHHHHHHhhcCCCcccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEee-c-cee------
Q 007567 167 LATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV-P-VGL------ 238 (598)
Q Consensus 167 ~sTyG~Geppdna~~F~~~L~~~~~~~~~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~-~-~g~------ 238 (598)
+|+| +|.+|.-.+.|++|+... ....+.|++.++++..-..+... .+...+...|..+|+..+- | ...
T Consensus 80 sP~y-~~~~~~~lK~~iD~~~~~--~~~~~~gK~~~~~~~s~g~~gg~-~a~~~Lr~~l~~lg~~v~~~~~~~~~~~~~~ 155 (193)
T 3svl_A 80 TPEY-NYSVPGGLKNAIDWLSRL--PDQPLAGKPVLIQTSSMGVIGGA-RCQYHLRQILVFLDAMVMNKPEFMGGVIQNK 155 (193)
T ss_dssp ECCB-TTBCCHHHHHHHHHHHTS--TTCTTTTCEEEEEEECSSTTTTH-HHHHHHHHHHHHTTCEECCSSCEEETTGGGG
T ss_pred eccc-CCCCCHHHHHHHHHHhhc--CccccCCCeEEEEEeCCCCcchH-HHHHHHHHHHHHCCCEEcCCCeEeecchhhh
Confidence 9999 999999999999999852 12468999999999632223222 3557888999999998662 1 111
Q ss_pred ccCCCC--chHHHHHHHHHHHHHHHhhh
Q 007567 239 GDDDQC--IEDDFSAWRELVWPELDNLL 264 (598)
Q Consensus 239 gD~~~~--~e~~f~~W~~~l~~~L~~~~ 264 (598)
-|++.+ .+++..+..+.+...+....
T Consensus 156 f~~~~g~l~d~~~~~~l~~~~~~~~~~~ 183 (193)
T 3svl_A 156 VDPQTGEVIDQGTLDHLTGQLTAFGEFI 183 (193)
T ss_dssp EETTTTEECCHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHHHHHH
Confidence 122212 34556666666666555443
No 93
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=97.87 E-value=0.00023 Score=67.71 Aligned_cols=151 Identities=9% Similarity=0.009 Sum_probs=105.0
Q ss_pred ceEEEEEeCCC---chHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHH
Q 007567 105 QKVTIFFGTQT---GTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAAR 181 (598)
Q Consensus 105 ~~v~I~YgSqT---Gtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~ 181 (598)
|+|+|++||-- +.+..++...++ .. ..+++.||.+ ..|-.+..+.+...+.+||.+|.| .+.+|.-.+.
T Consensus 1 MkiLii~ghP~~~~S~~~~~l~~~~~----~~--~~v~v~dL~~-~~D~~~~~~~l~~aD~iV~~~P~y-~~~~pa~lK~ 72 (177)
T 3ha2_A 1 MQTLIIVAHPELARSNTQPFFKAAIE----NF--SNVTWHPLVA-DFNVEQEQSLLLQNDRIILEFPLY-WYSAPALLKQ 72 (177)
T ss_dssp CCEEEEECCTTTTTCSSHHHHHHHHT----TC--TTEEEEECCT-TCCHHHHHHHHHTCSEEEEEEECB-TTBCCHHHHH
T ss_pred CeEEEEEcCCCcccCHHHHHHHHHHh----cC--CCEEEEECCC-cccHHHHHHHHHhCCEEEEECChh-hccCCHHHHH
Confidence 47999999965 444444443333 32 3478999986 444444557889999999999999 8999999999
Q ss_pred HHHHHHhhc---CCCcccCCceEEEEeecCCcchhH----------hHHHHHHHHHHHhcCCeEeecceeccCCCCchHH
Q 007567 182 FYKWFTEQK---EGGEWLQKLKYGVFGLGNRQYEHF----------NKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDD 248 (598)
Q Consensus 182 F~~~L~~~~---~~~~~l~~~~yaVFGLGds~Y~~F----------n~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~ 248 (598)
|++.+.... .....|+|+++.++.......+.| ...-+-+...+.-+|.+-+-+......+...+++
T Consensus 73 ~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~~~y~~~g~~g~~~~~~l~p~~~~~~~~G~~~~~~~~~~g~~~~~~~~ 152 (177)
T 3ha2_A 73 WMDTVMTTKFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMRPFEAFANKTKMMYLPILAVHQFLYLEPDA 152 (177)
T ss_dssp HHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCGGGSSTTSTTCSCHHHHTHHHHHHHHHTTCEECCCEEEESGGGSCHHH
T ss_pred HHHHHhhcccccCCCcCCCCCEEEEEEeCCCChHHhcccCcccCCHHHHHHHHHHHHHhCCCeEeCeEEEeCCCCCCHHH
Confidence 999864310 112468999999997755543222 2334445667778899988776665555556788
Q ss_pred HHHHHHHHHHHHHhh
Q 007567 249 FSAWRELVWPELDNL 263 (598)
Q Consensus 249 f~~W~~~l~~~L~~~ 263 (598)
.++|.++....|...
T Consensus 153 ~~~~l~~~~~~l~~~ 167 (177)
T 3ha2_A 153 QQRLLVAYQQYATNV 167 (177)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHccc
Confidence 999999887777643
No 94
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.51 E-value=0.0016 Score=69.91 Aligned_cols=157 Identities=10% Similarity=0.061 Sum_probs=106.0
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCC----CCCcchHHHHhhccCCeEEEEEecCCCCCcchHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDD----YADEEDEYEEKLKKENIVFFFLATYGDGEPTDNA 179 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~----~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna 179 (598)
+++|+|+|||-.++...+.+.+++.++.. ..+++.||.+ ++.+-....+.+...+.+||.+|.| .+..|.-.
T Consensus 236 ~mkiLvi~gspr~~ss~~n~~l~~~~~~~---~~v~v~dL~~~~p~~~~d~~~~~~~l~~aD~iv~~~P~y-w~~~Pa~l 311 (413)
T 3l9w_A 236 SGMILIIYAHPYPHHSHANKRMLEQARTL---EGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQ-WYSIPPLL 311 (413)
T ss_dssp -CCEEEEECCSCGGGCSHHHHHHHHHHTS---SSEEEEEHHHHCTTSCCCHHHHHHHHHTCSEEEEEEECB-TTBCCHHH
T ss_pred CCCEEEEEECCCcchHHHHHHHHHHHhcC---CCEEEEEchhhCCCCcHHHHHHHHHHHhCCEEEEECchh-hccCCHHH
Confidence 47899999998877655788888877643 3467887732 2333334457788999999999999 89999999
Q ss_pred HHHHHHHHhhc----CCCcccCCceEEEEeecCCcchh--------HhHHHHHHHHHHHhcCCeEeecceeccCCCCchH
Q 007567 180 ARFYKWFTEQK----EGGEWLQKLKYGVFGLGNRQYEH--------FNKIAKVVDEILANQGAKRLVPVGLGDDDQCIED 247 (598)
Q Consensus 180 ~~F~~~L~~~~----~~~~~l~~~~yaVFGLGds~Y~~--------Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~ 247 (598)
+.|++++.... ..+..|+|+++.++.......+. |...-.-+...|.-+|++-+-+........-.++
T Consensus 312 K~~iDrv~~~g~~y~~~~~~l~gK~~~~~~t~g~~~~~y~~~~~~~~~~~l~~l~~~~~~~G~~~l~~~~~~g~~~~~d~ 391 (413)
T 3l9w_A 312 KLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDE 391 (413)
T ss_dssp HHHHHHHSCBTTTBSTTCCTTTTCEEEEEEECSSCGGGGCCSSSCSGGGGGHHHHHHHHHTTCEECCCEEECCSTTCCHH
T ss_pred HHHHHHHHhcCceecCCCCccccceEEEEEeCCCChHhhCCCCccCchHHHHHHHHHHHhCCCeecceEEEcCCCCCCHH
Confidence 99999885321 12235899999887653332222 2233466777788889998766554433333456
Q ss_pred HHHHHHHHHHHHHHhhh
Q 007567 248 DFSAWRELVWPELDNLL 264 (598)
Q Consensus 248 ~f~~W~~~l~~~L~~~~ 264 (598)
+..++.+.....|....
T Consensus 392 ~~~~~~~~~~~~L~~~~ 408 (413)
T 3l9w_A 392 TLEGQARHYKQRLLEWQ 408 (413)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66666666666665543
No 95
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=97.31 E-value=0.0075 Score=61.37 Aligned_cols=159 Identities=13% Similarity=0.024 Sum_probs=108.3
Q ss_pred CceEEEEEeC--CCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCc--------------------------------
Q 007567 104 KQKVTIFFGT--QTGTAEGFAKALADEARARYDKAIFKVVDIDDYADE-------------------------------- 149 (598)
Q Consensus 104 ~~~v~I~YgS--qTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~-------------------------------- 149 (598)
.|||+|+||+ ..+.+..+++.+.+.+++.| ..|+++||-+...+
T Consensus 22 ~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G--~eV~v~DLy~~~f~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (280)
T 4gi5_A 22 SMKVLLIYAHPEPRSLNGALKNFAIRHLQQAG--HEVQVSDLYAMRWKAGYDADDSGAPPVGEFWRPTLDSKQAFAQGTQ 99 (280)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTT--CEEEEEETTTTTCCCSCCGGGSSSSCSSSSCCHHHHHHHHHHHTCS
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHHHCC--CeEEEEEccccCCCCcCCHHHhcccccccccChhhHHHHHhhcCCC
Confidence 4689999998 44678889999999998876 56889999543321
Q ss_pred ---chHHHHhhccCCeEEEEEecCCCCCcchHHHHHHHHHHhhcC----------------CCcccCCceEEEEeecCCc
Q 007567 150 ---EDEYEEKLKKENIVFFFLATYGDGEPTDNAARFYKWFTEQKE----------------GGEWLQKLKYGVFGLGNRQ 210 (598)
Q Consensus 150 ---~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~~L~~~~~----------------~~~~l~~~~yaVFGLGds~ 210 (598)
-.+..+.+...+.+||+.|.| .+.+|.-.+.|++..-.... ....|+|+++.++-.-+..
T Consensus 100 ~~dv~~~~~~l~~aD~iv~~~P~~-w~~~Pa~lK~~iDrv~~~g~ay~~~~~~~~~~~~~~~~g~l~gKk~~l~~T~g~~ 178 (280)
T 4gi5_A 100 SADIVAEQEKLLWADTVIFQFPLW-WFSMPAIMKGWIDRVYAWGFAYGVGEHSDRHWGDRYGEGTFVGKRAMLIVTAGGW 178 (280)
T ss_dssp CHHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBSCSCBSSSCBSSCSSCSTTTTCEEEEEEECSSC
T ss_pred cHHHHHHHHHHHhCCEEEEEeccc-cccCcHHHHHHHHHhcccCceeccCCccccccccccCccccCCCEEEEEEecCCC
Confidence 111224577889999999999 89999999999988743110 1224778888766554443
Q ss_pred chh-----HhHHHHHHHHHHH-----hcCCeEeecceeccCCCCchHHHHHHHHHHHHHHHhhhC
Q 007567 211 YEH-----FNKIAKVVDEILA-----NQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLR 265 (598)
Q Consensus 211 Y~~-----Fn~~~k~ld~~L~-----~lGA~ri~~~g~gD~~~~~e~~f~~W~~~l~~~L~~~~~ 265 (598)
.+. |+.....+-..+. -.|.+.+-|....+.+...++++++|.+.+-+.|..+..
T Consensus 179 ~~~y~~~g~~~~~~~~l~~~~~~~~~~~Gm~~l~~f~~~~~~~~~~~~~~~~~~~~~~~L~~l~~ 243 (280)
T 4gi5_A 179 AEHYSPRGINGPIDDILFPIQHGMLFYPGFEVLPPLVFYRTDKTDAGQFADQCAALAERLDTLWQ 243 (280)
T ss_dssp GGGGSTTBTTCCHHHHTHHHHCCCCCTTTCEECCCEEECSGGGCCHHHHHHHHHHHHHHHHTTTT
T ss_pred hHHccccccCCCHHHHHHHHHHHHHHcCCCeECCcEEEecCCCCCHHHHHHHHHHHHHHHhhhhh
Confidence 333 3332222212121 247777767766666666788899999998888887764
No 96
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=97.05 E-value=0.00028 Score=65.57 Aligned_cols=39 Identities=13% Similarity=-0.101 Sum_probs=29.2
Q ss_pred EEEEeCCCccCCCCCCCcEEEEeCCCChHhHHHHHHHHhh
Q 007567 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGSWSRTGT 588 (598)
Q Consensus 549 ~i~v~~s~F~lp~~~~~PiImIg~GTGiAPfr~flqer~~ 588 (598)
.|.-+.++|.... ...|++|||+||||||+++++++...
T Consensus 9 ~v~gP~G~~f~~~-~~~~~llIaGG~GItPl~sm~~~l~~ 47 (158)
T 3lrx_A 9 NVAGPLGTPVPME-KFGKILAIGAYTGIVEVYPIAKAWQE 47 (158)
T ss_dssp ---CCCCCCBCCC-CCSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCccC-CCCeEEEEEccCcHHHHHHHHHHHHh
Confidence 5555667765433 46899999999999999999998764
No 97
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=96.83 E-value=0.00062 Score=62.07 Aligned_cols=39 Identities=13% Similarity=-0.061 Sum_probs=29.9
Q ss_pred EEEeCCCccCCCCCCCcEEEEeCCCChHhHHHHHHHHhhc
Q 007567 550 IFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGSWSRTGTL 589 (598)
Q Consensus 550 i~v~~s~F~lp~~~~~PiImIg~GTGiAPfr~flqer~~~ 589 (598)
|..+.|+|....+ ..|++|||+||||||+++++++....
T Consensus 5 v~GP~G~~~~~~~-~~~~llIaGG~GiaPl~sm~~~l~~~ 43 (142)
T 3lyu_A 5 VAGPLGTPVPMEK-FGKILAIGAYTGIVEVYPIAKAWQEI 43 (142)
T ss_dssp --CCCSCCBCCCC-CSEEEEEEETTHHHHHHHHHHHHHHT
T ss_pred eeCCCCCCccCCC-CCeEEEEECcCcHHHHHHHHHHHHhc
Confidence 3345677765533 68999999999999999999987654
No 98
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=67.82 E-value=12 Score=32.10 Aligned_cols=45 Identities=11% Similarity=0.157 Sum_probs=36.2
Q ss_pred CCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCC
Q 007567 103 GKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYA 147 (598)
Q Consensus 103 ~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~ 147 (598)
.+++|+++=||-.||+..++.+|.+.+++.+-...+...++.++.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~ 64 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIE 64 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTT
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHh
Confidence 467899999999999999999999999887644445666776654
No 99
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=62.58 E-value=13 Score=37.16 Aligned_cols=51 Identities=22% Similarity=0.413 Sum_probs=41.5
Q ss_pred cCCCCCeeeEEeeeecccCCCCCCceeEEEEeecCCCCccCCCCeeEEecCC
Q 007567 310 YDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCEN 361 (598)
Q Consensus 310 ~d~~~p~~a~v~~~~eL~~~~s~rs~~hie~di~~~~l~Y~~GD~l~V~P~N 361 (598)
++...++.++|+..+.++.++...+++++.|..+. .+.|+||.|+.|..+.
T Consensus 23 ~~~~~~~~~~V~~~~~~t~~~~~~~v~~~~l~~~~-~~~~~pGQ~v~l~~~~ 73 (311)
T 3lo8_A 23 YKPKEPFTATIVSVESLVGPKAPGETCHIVIDHGG-NVPYWEGQSYGVIPPG 73 (311)
T ss_dssp BBTTBCEEEEEEEEEECSCTTSSSCEEEEEEECTT-SSCCCTTCEEEEECSS
T ss_pred cCCCCCeEEEEEeeEeccCCCCCCccEEEEEeCCC-CCcccCCCEEEEeCCC
Confidence 44567789999999999854455679999999864 6899999999998764
No 100
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=60.27 E-value=26 Score=30.86 Aligned_cols=113 Identities=17% Similarity=0.205 Sum_probs=59.8
Q ss_pred EEEEeCCCchHHHHHHHHHHH-HHhhcCCceeEEEcCCCCCCcchHHHHhhccCCe-EEEEEecCCCCCcchHHHHHHHH
Q 007567 108 TIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVDIDDYADEEDEYEEKLKKENI-VFFFLATYGDGEPTDNAARFYKW 185 (598)
Q Consensus 108 ~I~YgSqTGtae~~A~~la~~-l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~-vIf~~sTyG~Geppdna~~F~~~ 185 (598)
.|+-++.-|..-++-..+... +...| ++++++-...+ .+++.+...+.+. +|.+|++. +.....+.++.+.
T Consensus 5 ~vvla~~~~d~HdiG~~~v~~~l~~~G----~~Vi~lG~~~p-~e~~v~~a~~~~~d~v~lS~~~--~~~~~~~~~~i~~ 77 (137)
T 1ccw_A 5 TIVLGVIGSDCHAVGNKILDHAFTNAG----FNVVNIGVLSP-QELFIKAAIETKADAILVSSLY--GQGEIDCKGLRQK 77 (137)
T ss_dssp EEEEEEETTCCCCHHHHHHHHHHHHTT----CEEEEEEEEEC-HHHHHHHHHHHTCSEEEEEECS--STHHHHHTTHHHH
T ss_pred EEEEEeCCCchhHHHHHHHHHHHHHCC----CEEEECCCCCC-HHHHHHHHHhcCCCEEEEEecC--cCcHHHHHHHHHH
Confidence 344456666555554444444 44444 46776644222 2233344444443 44455554 5555677788888
Q ss_pred HHhhcCCCcccCCceEEEEeec-CCcchhHhHHHHHHHHHHHhcCCeEeecce
Q 007567 186 FTEQKEGGEWLQKLKYGVFGLG-NRQYEHFNKIAKVVDEILANQGAKRLVPVG 237 (598)
Q Consensus 186 L~~~~~~~~~l~~~~yaVFGLG-ds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g 237 (598)
|++. .+.+.++-|=|-. .... .|. ...+.++++|+..+++.+
T Consensus 78 l~~~-----g~~~i~v~vGG~~~~~~~-~~~----~~~~~~~~~G~d~~~~~g 120 (137)
T 1ccw_A 78 CDEA-----GLEGILLYVGGNIVVGKQ-HWP----DVEKRFKDMGYDRVYAPG 120 (137)
T ss_dssp HHHT-----TCTTCEEEEEESCSSSSC-CHH----HHHHHHHHTTCSEECCTT
T ss_pred HHhc-----CCCCCEEEEECCCcCchH-hhh----hhHHHHHHCCCCEEECCC
Confidence 8763 2335666554422 1111 122 244678899999988654
No 101
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=58.32 E-value=15 Score=33.95 Aligned_cols=58 Identities=14% Similarity=0.212 Sum_probs=44.1
Q ss_pred ccCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHH
Q 007567 195 WLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAW 252 (598)
Q Consensus 195 ~l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W 252 (598)
..+.++++|+-.||....-++..+..+.++|+++|++...-....|+...+.+.+..|
T Consensus 7 ~~~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a 64 (172)
T 1mkz_A 7 EFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAW 64 (172)
T ss_dssp SCCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHH
Confidence 3667899999999998778888899999999999998665444555544455555555
No 102
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=52.55 E-value=17 Score=26.13 Aligned_cols=20 Identities=30% Similarity=0.408 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHhhhhccCC
Q 007567 60 TSIAVLIGCVVVFILRRSSS 79 (598)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~ 79 (598)
.++.++++..++++|||+..
T Consensus 20 v~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHhhhhhh
Confidence 33333344445556666553
No 103
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=51.51 E-value=36 Score=28.78 Aligned_cols=58 Identities=14% Similarity=0.113 Sum_probs=41.3
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecC
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATY 170 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTy 170 (598)
+++|+++=|+--||+ -+++++.+.+++++-...+.-+++.+.. +.+.+++ +|+..+..
T Consensus 3 mkkIll~Cg~G~sTS-~l~~k~~~~~~~~gi~~~i~a~~~~~~~-------~~~~~~D-vil~~pqv 60 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTS-LLVSKMRAQAEKYEVPVIIEAFPETLAG-------EKGQNAD-VVLLGPQI 60 (106)
T ss_dssp CEEEEEECSSSTTTH-HHHHHHHHHHHHSCCSEEEEEECSSSTT-------HHHHHCS-EEEECTTS
T ss_pred CcEEEEECCCchhHH-HHHHHHHHHHHHCCCCeEEEEecHHHHH-------hhccCCC-EEEEccch
Confidence 468999999999999 8999999999988755555556666654 2345566 44454544
No 104
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=48.44 E-value=18 Score=26.07 Aligned_cols=18 Identities=22% Similarity=0.591 Sum_probs=9.1
Q ss_pred HHHHHHHHHHhhhhccCC
Q 007567 62 IAVLIGCVVVFILRRSSS 79 (598)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~ 79 (598)
++++++.++++++||++.
T Consensus 23 l~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 23 LVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhheehhhh
Confidence 444455444555555553
No 105
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=48.22 E-value=21 Score=25.63 Aligned_cols=20 Identities=10% Similarity=0.225 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHhhhhccCC
Q 007567 60 TSIAVLIGCVVVFILRRSSS 79 (598)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~ 79 (598)
.++.++++..++++|||+..
T Consensus 21 v~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 21 LLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHhhhhHh
Confidence 33333334444555666543
No 106
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=43.93 E-value=30 Score=29.24 Aligned_cols=41 Identities=10% Similarity=0.179 Sum_probs=31.7
Q ss_pred ceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCC
Q 007567 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDY 146 (598)
Q Consensus 105 ~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~ 146 (598)
++|+++=+|-.||+ .+|++|.+.+++.+-...+..+++.++
T Consensus 5 mkIlvvC~~G~~TS-ll~~kl~~~~~~~gi~~~i~~~~~~~~ 45 (109)
T 2l2q_A 5 MNILLVCGAGMSTS-MLVQRIEKYAKSKNINATIEAIAETRL 45 (109)
T ss_dssp EEEEEESSSSCSSC-HHHHHHHHHHHHHTCSEEEEEECSTTH
T ss_pred eEEEEECCChHhHH-HHHHHHHHHHHHCCCCeEEEEecHHHH
Confidence 56999999999999 999999999988764334455555543
No 107
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=41.82 E-value=14 Score=33.86 Aligned_cols=57 Identities=18% Similarity=0.160 Sum_probs=40.6
Q ss_pred cCCceEEEEeecCCcc--hhHhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHH
Q 007567 196 LQKLKYGVFGLGNRQY--EHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWR 253 (598)
Q Consensus 196 l~~~~yaVFGLGds~Y--~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~ 253 (598)
.+..+++|+-.||.-+ .-++..+..+.++|+++|++...-....|| ..+.+.+.+|.
T Consensus 5 ~~~~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~ 63 (164)
T 3pzy_A 5 MTTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAI 63 (164)
T ss_dssp --CCEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHH
Confidence 4567999999999886 457888889999999999987654445565 55666666664
No 108
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=40.22 E-value=13 Score=34.68 Aligned_cols=58 Identities=17% Similarity=0.247 Sum_probs=39.9
Q ss_pred ccCCceEEEEeecCCcc-------hhHhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHH
Q 007567 195 WLQKLKYGVFGLGNRQY-------EHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAW 252 (598)
Q Consensus 195 ~l~~~~yaVFGLGds~Y-------~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W 252 (598)
..+..+++|+-.||.-+ .-++..+..+.++|+++|++...-....||...+.+.+.+|
T Consensus 12 ~~~~~rv~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a 76 (178)
T 2pjk_A 12 APKSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDA 76 (178)
T ss_dssp -CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHH
Confidence 46779999999999765 34677788999999999998655434445433344444443
No 109
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=36.66 E-value=28 Score=31.84 Aligned_cols=57 Identities=18% Similarity=0.251 Sum_probs=40.6
Q ss_pred cCCceEEEEeecCCcchhHhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHH
Q 007567 196 LQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAW 252 (598)
Q Consensus 196 l~~~~yaVFGLGds~Y~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W 252 (598)
.+..+++|+-.||.--.-++..+..+.++|+++|++...-....|+...+.+.+.+|
T Consensus 11 ~~~~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~ 67 (169)
T 1y5e_A 11 PKEVRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAG 67 (169)
T ss_dssp -CCCEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHH
T ss_pred ccCCEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHH
Confidence 467899999999987555677788899999999998665444455543444444444
No 110
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=34.22 E-value=31 Score=29.20 Aligned_cols=42 Identities=12% Similarity=0.033 Sum_probs=31.3
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCC-ceeEEEcCCC
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDK-AIFKVVDIDD 145 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~-~~~~v~dl~~ 145 (598)
+++|+++-++--||+..++.+|.+.+++.+.. ..+..+++.+
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~~~~ 60 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGE 60 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEeeHHH
Confidence 57899999999999999999999999877533 3344444433
No 111
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=31.70 E-value=27 Score=32.04 Aligned_cols=57 Identities=19% Similarity=0.313 Sum_probs=40.1
Q ss_pred cCCceEEEEeecCCcchh-------HhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHH
Q 007567 196 LQKLKYGVFGLGNRQYEH-------FNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAW 252 (598)
Q Consensus 196 l~~~~yaVFGLGds~Y~~-------Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W 252 (598)
-+.+++||+=.||+.|+. ....+..+.++|+++|++-+.-...+|+...+.+.+..|
T Consensus 13 ~~~~~v~iitvsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~ 76 (178)
T 3iwt_A 13 PKSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDA 76 (178)
T ss_dssp CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCEEEEEEEcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHH
Confidence 457899999999987631 356788899999999998766555566543344444433
No 112
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=29.95 E-value=47 Score=28.44 Aligned_cols=58 Identities=12% Similarity=0.139 Sum_probs=36.2
Q ss_pred CCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcc-hHHHHhhccCCeEEEE
Q 007567 103 GKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEE-DEYEEKLKKENIVFFF 166 (598)
Q Consensus 103 ~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~-~~~~~~l~~~~~vIf~ 166 (598)
...-+.|.|||..+++.+.++.|.+ .| ..+.++++..+.+=+ +.+.+.+.+.+.++.+
T Consensus 13 g~dv~iv~~Gs~~~~a~eA~~~L~~----~G--i~v~vi~~r~~~P~d~~~l~~~~~~~~~vvvv 71 (118)
T 3ju3_A 13 EADITFVTWGSQKGPILDVIEDLKE----EG--ISANLLYLKMFSPFPTEFVKNVLSSANLVIDV 71 (118)
T ss_dssp SCSEEEEEEGGGHHHHHHHHHHHHH----TT--CCEEEEEECSSCSCCHHHHHHHHTTCSCCCCC
T ss_pred CCCEEEEEECccHHHHHHHHHHHHH----CC--CceEEEEECeEecCCHHHHHHHHcCCCEEEEE
Confidence 3445677799999999998876643 33 456788887665433 2233444555544433
No 113
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=29.40 E-value=2.6e+02 Score=27.64 Aligned_cols=82 Identities=12% Similarity=0.129 Sum_probs=43.6
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFY 183 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~ 183 (598)
+.+|+|+-|...=.-+..+..|++.|.+.+ ...+.+.+-.+...+...+.+.|.+++++|+ .+.|+--+++-.+.|.
T Consensus 4 ~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g-~f~V~~~~d~~~~~d~~~f~~~L~~~D~vV~--~~~~~~l~~~~~~~l~ 80 (281)
T 4e5v_A 4 PIKTLLITGQNNHNWQVSHVVLKQILENSG-RFDVDFVISPEQGKDMSGFVLDFSPYQLVVL--DYNGDSWPEETNRRFL 80 (281)
T ss_dssp CEEEEEEESCCSSCHHHHHHHHHHHHHHTT-SEEEEEEECCCTTSCCTTCCCCCTTCSEEEE--CCCSSCCCHHHHHHHH
T ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHHhcC-CEEEEEEeCCccccchhHHhhhhhcCCEEEE--eCCCCcCCHHHHHHHH
Confidence 467888865443335777788888887665 2445554321000000001135788998874 4443222344555677
Q ss_pred HHHHh
Q 007567 184 KWFTE 188 (598)
Q Consensus 184 ~~L~~ 188 (598)
+++++
T Consensus 81 ~yV~~ 85 (281)
T 4e5v_A 81 EYVQN 85 (281)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 77764
No 114
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=27.48 E-value=32 Score=31.89 Aligned_cols=57 Identities=21% Similarity=0.133 Sum_probs=41.1
Q ss_pred CceEEEEeecCCcc--hhHhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHHHH
Q 007567 198 KLKYGVFGLGNRQY--EHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRE 254 (598)
Q Consensus 198 ~~~yaVFGLGds~Y--~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W~~ 254 (598)
.++++|+-.||.-. .-++..+..+.++|+++|++...-...+|+...+.+.+.+|.+
T Consensus 3 ~~~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~ 61 (172)
T 3kbq_A 3 AKNASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALE 61 (172)
T ss_dssp -CEEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHh
Confidence 37899999998765 4567778889999999999866545556665456666666644
No 115
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=26.60 E-value=2.1e+02 Score=27.84 Aligned_cols=62 Identities=11% Similarity=0.061 Sum_probs=35.8
Q ss_pred HHHHHHHHHhhcCCceeEEEcCCCCCC-cchHHHHhhccCCeEEEEEecCCCCCcchHHHHHHHHHHh
Q 007567 122 AKALADEARARYDKAIFKVVDIDDYAD-EEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFYKWFTE 188 (598)
Q Consensus 122 A~~la~~l~~~~~~~~~~v~dl~~~~~-~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~~~L~~ 188 (598)
+..|++.|.+.+ ..+.+..+++... -+ .+.|.+++++||...+.|+--.++..+.|.+++.+
T Consensus 34 ~~~i~~~L~~~g--f~V~~~t~dd~~~~~~---~~~L~~~DvvV~~~~~~~~~l~~~~~~al~~~V~~ 96 (252)
T 1t0b_A 34 HTVIASYLAEAG--FDAATAVLDEPEHGLT---DEVLDRCDVLVWWGHIAHDEVKDEVVERVHRRVLE 96 (252)
T ss_dssp HHHHHHHHHHTT--CEEEEEESSSGGGGCC---HHHHHTCSEEEEECSSCGGGSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhCC--cEEEEEeccCccccCC---HhHHhcCCEEEEecCCCCCcCCHHHHHHHHHHHHc
Confidence 445566666544 5566665544321 01 24688999999865444333344456667777764
No 116
>2xpn_B SPT6, chromatin structure modulator; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.95A {Encephalitozoon cuniculi} PDB: 2xpo_B
Probab=25.98 E-value=28 Score=21.67 Aligned_cols=12 Identities=25% Similarity=0.769 Sum_probs=9.6
Q ss_pred CceEEEEeecCC
Q 007567 198 KLKYGVFGLGNR 209 (598)
Q Consensus 198 ~~~yaVFGLGds 209 (598)
.+-|-|||+||-
T Consensus 3 slFyEIFGtG~E 14 (26)
T 2xpn_B 3 HMFFEIFGTGEE 14 (26)
T ss_pred cEEEEEecCCce
Confidence 467889999974
No 117
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=25.91 E-value=38 Score=31.99 Aligned_cols=55 Identities=18% Similarity=0.233 Sum_probs=34.8
Q ss_pred CceEEEEeecCCcc--hhHhHHHHHHHHHHHhcCCe--EeecceeccCCCCchHHHHHH
Q 007567 198 KLKYGVFGLGNRQY--EHFNKIAKVVDEILANQGAK--RLVPVGLGDDDQCIEDDFSAW 252 (598)
Q Consensus 198 ~~~yaVFGLGds~Y--~~Fn~~~k~ld~~L~~lGA~--ri~~~g~gD~~~~~e~~f~~W 252 (598)
..+++|+-.||.-+ .-++..+..+.++|+++|++ .+.-....||...+.+.+..|
T Consensus 3 ~~rv~IIttGdEl~~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV~Dd~~~I~~al~~a 61 (195)
T 1di6_A 3 TLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCEL 61 (195)
T ss_dssp CEEEEEEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCCeEEchHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHH
Confidence 46899999999987 45777788899999999987 333233345433444445444
No 118
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=24.89 E-value=2.9e+02 Score=27.10 Aligned_cols=79 Identities=10% Similarity=0.050 Sum_probs=46.1
Q ss_pred CCceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCC-eEEEEEecCCCCCcchHHHH
Q 007567 103 GKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKEN-IVFFFLATYGDGEPTDNAAR 181 (598)
Q Consensus 103 ~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~-~vIf~~sTyG~Geppdna~~ 181 (598)
+.++|.|+|++........++.+.+.+++.+.......++....+. ......+...+ -+||+. ++ ++.+..
T Consensus 148 g~~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~d~--~~~~~~l~~~~~d~v~~~-~~-----~~~a~~ 219 (366)
T 3td9_A 148 GAKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVFFRSGDQDF--SAQLSVAMSFNPDAIYIT-GY-----YPEIAL 219 (366)
T ss_dssp CCCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCCC--HHHHHHHHHTCCSEEEEC-SC-----HHHHHH
T ss_pred CCcEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEEeCCCCccH--HHHHHHHHhcCCCEEEEc-cc-----hhHHHH
Confidence 5689999998766677778888888888776322111233322222 12234444333 344443 33 256778
Q ss_pred HHHHHHhh
Q 007567 182 FYKWFTEQ 189 (598)
Q Consensus 182 F~~~L~~~ 189 (598)
|++.+.+.
T Consensus 220 ~~~~~~~~ 227 (366)
T 3td9_A 220 ISRQARQL 227 (366)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 88888764
No 119
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=23.86 E-value=3.5e+02 Score=25.81 Aligned_cols=42 Identities=17% Similarity=0.132 Sum_probs=28.8
Q ss_pred CceEEEEEeCCCchHHH---HHHHHHHHHHhhcCCceeEEEcCCCCC
Q 007567 104 KQKVTIFFGTQTGTAEG---FAKALADEARARYDKAIFKVVDIDDYA 147 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~---~A~~la~~l~~~~~~~~~~v~dl~~~~ 147 (598)
+++|.|++|.++---+. .++.+++.+++.| ..+.++|.++..
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G--~~v~~~~~~~~~ 46 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG--IDAYPVDPKEVD 46 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT--CEEEEECTTTSC
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCC--CeEEEEecCchH
Confidence 46899999987653333 5567777787776 556777777543
No 120
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=23.39 E-value=1e+02 Score=26.76 Aligned_cols=45 Identities=11% Similarity=0.049 Sum_probs=35.1
Q ss_pred CCceEEEEEeCCCchHHHHHHHHHHHHHhhcC-CceeEEEcCCCCC
Q 007567 103 GKQKVTIFFGTQTGTAEGFAKALADEARARYD-KAIFKVVDIDDYA 147 (598)
Q Consensus 103 ~~~~v~I~YgSqTGtae~~A~~la~~l~~~~~-~~~~~v~dl~~~~ 147 (598)
.+++|+++=|+-.||+..++.+|.+.+.+.+. ...+..+++.++.
T Consensus 12 ~~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi~~~~V~~~~i~e~~ 57 (125)
T 1vkr_A 12 HVRKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQISVTNSAINNLP 57 (125)
T ss_dssp CCCEEEECCSSSSHHHHHHHHHHHHHHHHTTCTTSEEEECCTTCCC
T ss_pred cccEEEEECCCcHHHHHHHHHHHHHHHHHCCCceEEEEEeeHHHCC
Confidence 46789999999999999999999999987764 3445555666553
No 121
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=22.48 E-value=1.1e+02 Score=30.48 Aligned_cols=89 Identities=10% Similarity=0.025 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhh-ccCCeEEEEEecC-CCCCcchHHHHHHHHHHhhcCCCc
Q 007567 117 TAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKL-KKENIVFFFLATY-GDGEPTDNAARFYKWFTEQKEGGE 194 (598)
Q Consensus 117 tae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l-~~~~~vIf~~sTy-G~Geppdna~~F~~~L~~~~~~~~ 194 (598)
|+...++.+++.+.+++-+..++++|+.....-......-+ +.--.+-|+.--. |...-|++...|.+.|...
T Consensus 122 N~~~~~~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~~~Gl~~~p~~~~~vlGv~~g~~~~~~~l~~~~~~l~~~----- 196 (275)
T 3no5_A 122 NPPELVDWLAAEMKTYGIKPEVEAFDLSMIFQAAAMQAAGAIVGPLHIQFVMGIKNAMPVDREVLEFYVQTLKRL----- 196 (275)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHHHTSSCSSCEEEEEECCTTSCCCCHHHHHHHHHHHHHH-----
T ss_pred CCHHHHHHHHHHHHHcCCeeEEEEEcHHHHHHHHHHHHCCCCCCCeeEEEEeCCCCCCCCCHHHHHHHHHHHHhC-----
Confidence 56777888888888877444556666544321000011112 2223444554433 3333334655555555431
Q ss_pred ccCCceEEEEeecCCcc
Q 007567 195 WLQKLKYGVFGLGNRQY 211 (598)
Q Consensus 195 ~l~~~~yaVFGLGds~Y 211 (598)
-.+..++|+|.|-.++
T Consensus 197 -~~~~~w~v~g~Gr~~~ 212 (275)
T 3no5_A 197 -SPDATWTGAGIGRHQL 212 (275)
T ss_dssp -CTTCEEEEEECGGGHH
T ss_pred -CCCCeEEEEecCHhhH
Confidence 1367899999997765
No 122
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=22.14 E-value=3e+02 Score=26.92 Aligned_cols=75 Identities=16% Similarity=0.024 Sum_probs=41.7
Q ss_pred CceEEEEEeCCCchHHHHHHHHHHHHHhhcCCceeEEEcCCCCCCcchHHHHhhccCCeEEEEEecCCCCCcchHHHHHH
Q 007567 104 KQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVDIDDYADEEDEYEEKLKKENIVFFFLATYGDGEPTDNAARFY 183 (598)
Q Consensus 104 ~~~v~I~YgSqTGtae~~A~~la~~l~~~~~~~~~~v~dl~~~~~~~~~~~~~l~~~~~vIf~~sTyG~Geppdna~~F~ 183 (598)
|++|+|+=|++. +..|..|.+.|++.+ ..|++++.++...+. ++|.+++++|+.- +....-.++..+.+.
T Consensus 4 m~~vLiV~g~~~---~~~a~~l~~aL~~~g--~~V~~i~~~~~~~~~----~~L~~yDvIIl~d-~~~~~l~~~~~~~L~ 73 (259)
T 3rht_A 4 MTRVLYCGDTSL---ETAAGYLAGLMTSWQ--WEFDYIPSHVGLDVG----ELLAKQDLVILSD-YPAERMTAQAIDQLV 73 (259)
T ss_dssp --CEEEEESSCT---TTTHHHHHHHHHHTT--CCCEEECTTSCBCSS----HHHHTCSEEEEES-CCGGGBCHHHHHHHH
T ss_pred CceEEEECCCCc---hhHHHHHHHHHHhCC--ceEEEecccccccCh----hHHhcCCEEEEcC-CccccCCHHHHHHHH
Confidence 578888833322 233555666666554 557777777664322 4688999888862 221222344555666
Q ss_pred HHHHh
Q 007567 184 KWFTE 188 (598)
Q Consensus 184 ~~L~~ 188 (598)
+|.++
T Consensus 74 ~yV~~ 78 (259)
T 3rht_A 74 TMVKA 78 (259)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 66653
No 123
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=21.89 E-value=78 Score=21.86 Aligned_cols=8 Identities=50% Similarity=0.841 Sum_probs=4.2
Q ss_pred HHHhhhhc
Q 007567 69 VVVFILRR 76 (598)
Q Consensus 69 ~~~~~~~~ 76 (598)
+.|++|||
T Consensus 30 l~~~~~rr 37 (38)
T 2k1k_A 30 ILVFRSRR 37 (38)
T ss_dssp HHHHHHCC
T ss_pred HHHHHeec
Confidence 44555655
No 124
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=21.32 E-value=45 Score=31.21 Aligned_cols=57 Identities=11% Similarity=0.240 Sum_probs=39.9
Q ss_pred cCCceEEEEeecCCcc--hhHhHHHHHHHHHHHh---cCCeEeecceeccCCCCchHHHHHH
Q 007567 196 LQKLKYGVFGLGNRQY--EHFNKIAKVVDEILAN---QGAKRLVPVGLGDDDQCIEDDFSAW 252 (598)
Q Consensus 196 l~~~~yaVFGLGds~Y--~~Fn~~~k~ld~~L~~---lGA~ri~~~g~gD~~~~~e~~f~~W 252 (598)
.+..+++|+-.||.-+ ..++..+..+.++|++ +|++.+.-....|+...+.+.+..|
T Consensus 12 ~~~~rv~IistGdEl~~g~~~D~n~~~L~~~L~~~~~~G~~v~~~~iv~Dd~~~I~~al~~a 73 (189)
T 1jlj_A 12 DHQIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDW 73 (189)
T ss_dssp -CCCEEEEEEECHHHHTTSSCCHHHHHHHHHHHCTTTTCCEEEEEEEECSCHHHHHHHHHHH
T ss_pred cCCCEEEEEEECCccCCCcccchHHHHHHHHHhchhcCCcEEEEEEEeCCCHHHHHHHHHHH
Confidence 4568999999999865 3467778889999998 8988765444555544444555555
No 125
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=20.89 E-value=33 Score=32.17 Aligned_cols=57 Identities=18% Similarity=0.099 Sum_probs=40.2
Q ss_pred ccCCceEEEEeecCCcc--hhHhHHHHHHHHHHHhcCCeEeecceeccCCCCchHHHHHH
Q 007567 195 WLQKLKYGVFGLGNRQY--EHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAW 252 (598)
Q Consensus 195 ~l~~~~yaVFGLGds~Y--~~Fn~~~k~ld~~L~~lGA~ri~~~g~gD~~~~~e~~f~~W 252 (598)
..+..+++|+-.||.-+ + ++..+..+.++|+++|++...-....||...+.+.+.+|
T Consensus 27 ~~~~~rvaIistGdEl~~G~-~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a 85 (185)
T 3rfq_A 27 ELVVGRALVVVVDDRTAHGD-EDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTA 85 (185)
T ss_dssp --CCEEEEEEEECHHHHTTC-CCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCCEEEEEEECcccCCCC-cCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHH
Confidence 45678999999999875 4 888899999999999998665444455433344444444
Done!