Query 007568
Match_columns 598
No_of_seqs 181 out of 992
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 12:23:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007568.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007568hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 2E-128 5E-133 1064.3 54.3 573 13-598 17-600 (612)
2 PLN02247 indole-3-acetic acid- 100.0 4E-125 9E-130 1041.2 53.1 573 12-598 5-597 (606)
3 PLN02249 indole-3-acetic acid- 100.0 5E-118 1E-122 993.2 52.8 557 18-597 21-588 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 1E-112 3E-117 947.6 42.0 515 20-582 2-528 (528)
5 COG1541 PaaK Coenzyme F390 syn 100.0 7E-28 1.5E-32 257.2 27.0 396 29-578 21-435 (438)
6 TIGR03335 F390_ftsA coenzyme F 100.0 7.8E-27 1.7E-31 256.2 27.2 393 29-554 12-431 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.9 4.4E-24 9.6E-29 232.4 27.3 385 29-553 6-409 (422)
8 TIGR02304 aden_form_hyp probab 99.9 1.4E-20 2.9E-25 204.9 25.8 319 29-505 22-377 (430)
9 COG1021 EntE Peptide arylation 99.5 7.3E-14 1.6E-18 145.4 10.9 131 312-472 306-459 (542)
10 PRK00174 acetyl-CoA synthetase 99.5 2.2E-11 4.8E-16 139.5 30.8 229 310-588 366-633 (637)
11 PRK06334 long chain fatty acid 99.5 3.4E-12 7.3E-17 143.5 21.8 134 310-472 298-455 (539)
12 PRK09274 peptide synthase; Pro 99.5 1.7E-11 3.6E-16 137.7 27.2 142 310-472 287-465 (552)
13 TIGR02188 Ac_CoA_lig_AcsA acet 99.5 3.8E-11 8.3E-16 137.2 30.6 228 310-586 357-624 (625)
14 PRK07529 AMP-binding domain pr 99.5 2.4E-11 5.1E-16 139.4 28.0 137 310-472 332-490 (632)
15 PTZ00237 acetyl-CoA synthetase 99.4 2.5E-11 5.3E-16 139.7 25.5 132 310-472 379-537 (647)
16 PRK06060 acyl-CoA synthetase; 99.4 6.6E-11 1.4E-15 137.4 27.9 133 310-472 259-410 (705)
17 PLN02574 4-coumarate--CoA liga 99.4 9E-11 2E-15 132.4 28.0 136 310-472 318-475 (560)
18 PRK13295 cyclohexanecarboxylat 99.4 5.7E-11 1.2E-15 133.4 25.8 133 309-472 310-464 (547)
19 PRK07514 malonyl-CoA synthase; 99.4 6.9E-11 1.5E-15 130.7 25.4 135 308-472 266-422 (504)
20 PRK04319 acetyl-CoA synthetase 99.4 9.3E-11 2E-15 132.5 26.4 132 310-472 322-477 (570)
21 PLN02654 acetate-CoA ligase 99.4 2.8E-10 6.1E-15 131.5 30.7 226 311-586 397-662 (666)
22 PRK07788 acyl-CoA synthetase; 99.4 4.6E-11 9.9E-16 134.2 23.4 132 310-472 322-472 (549)
23 PRK05677 long-chain-fatty-acid 99.4 2.2E-10 4.7E-15 129.3 28.1 132 310-472 325-478 (562)
24 TIGR03205 pimA dicarboxylate-- 99.4 1.9E-10 4.2E-15 128.9 27.4 134 310-472 311-466 (541)
25 TIGR02316 propion_prpE propion 99.4 7.2E-10 1.6E-14 127.0 32.3 133 310-472 353-517 (628)
26 TIGR01734 D-ala-DACP-lig D-ala 99.4 2.6E-10 5.6E-15 126.1 27.4 134 309-472 256-418 (502)
27 PRK06155 crotonobetaine/carnit 99.4 1.4E-10 3E-15 130.4 25.4 131 311-472 294-445 (542)
28 PRK06164 acyl-CoA synthetase; 99.3 3.5E-10 7.5E-15 126.6 28.0 111 337-472 319-451 (540)
29 PRK08314 long-chain-fatty-acid 99.3 2.1E-10 4.4E-15 128.5 25.9 133 310-472 304-461 (546)
30 PLN03051 acyl-activating enzym 99.3 3.2E-10 6.9E-15 126.2 26.7 44 424-471 358-401 (499)
31 PRK05605 long-chain-fatty-acid 99.3 2.2E-10 4.8E-15 129.3 25.5 134 310-472 335-490 (573)
32 PLN02860 o-succinylbenzoate-Co 99.3 4E-11 8.6E-16 135.4 19.3 148 309-472 286-459 (563)
33 PRK10524 prpE propionyl-CoA sy 99.3 1.1E-09 2.4E-14 125.3 31.1 133 310-472 354-518 (629)
34 PRK07656 long-chain-fatty-acid 99.3 2.5E-10 5.3E-15 126.3 25.0 133 310-472 280-437 (513)
35 PRK06187 long-chain-fatty-acid 99.3 2.4E-10 5.2E-15 126.4 24.6 134 309-472 279-440 (521)
36 PRK03584 acetoacetyl-CoA synth 99.3 7.2E-10 1.6E-14 127.6 29.3 226 311-586 383-648 (655)
37 PRK07786 long-chain-fatty-acid 99.3 4.5E-10 9.7E-15 126.1 26.9 131 312-472 291-444 (542)
38 COG0318 CaiC Acyl-CoA syntheta 99.3 1.3E-10 2.9E-15 130.7 22.3 132 312-473 292-447 (534)
39 PRK06145 acyl-CoA synthetase; 99.3 2.1E-10 4.6E-15 126.7 23.5 133 310-472 263-418 (497)
40 PRK09088 acyl-CoA synthetase; 99.3 2.8E-10 6E-15 125.7 24.3 133 310-472 251-406 (488)
41 PRK05852 acyl-CoA synthetase; 99.3 7E-10 1.5E-14 124.2 27.7 135 309-472 293-453 (534)
42 PRK04813 D-alanine--poly(phosp 99.3 3.3E-10 7.2E-15 125.0 24.7 133 310-472 259-420 (503)
43 PRK08316 acyl-CoA synthetase; 99.3 8.1E-10 1.8E-14 122.5 27.8 133 311-472 286-440 (523)
44 PRK07638 acyl-CoA synthetase; 99.3 1.3E-10 2.9E-15 128.2 21.1 128 318-472 258-406 (487)
45 PLN02246 4-coumarate--CoA liga 99.3 4.3E-10 9.3E-15 126.0 24.5 133 311-472 298-457 (537)
46 PRK12583 acyl-CoA synthetase; 99.3 7.6E-10 1.6E-14 124.1 25.8 134 310-472 316-473 (558)
47 TIGR03098 ligase_PEP_1 acyl-Co 99.3 8.1E-10 1.8E-14 122.4 25.7 134 310-472 273-439 (515)
48 TIGR01733 AA-adenyl-dom amino 99.3 1.6E-10 3.5E-15 123.8 19.3 134 310-472 233-400 (408)
49 PRK13382 acyl-CoA synthetase; 99.3 4.9E-10 1.1E-14 125.7 24.0 132 310-472 311-461 (537)
50 PRK10252 entF enterobactin syn 99.3 4.1E-10 8.8E-15 139.0 25.2 131 311-472 717-882 (1296)
51 PLN02614 long-chain acyl-CoA s 99.3 6.9E-11 1.5E-15 136.5 17.2 135 311-472 386-542 (666)
52 PRK07867 acyl-CoA synthetase; 99.3 6.2E-10 1.3E-14 124.9 24.0 125 324-472 278-426 (529)
53 PRK06839 acyl-CoA synthetase; 99.3 1.4E-09 3E-14 119.9 26.5 131 310-472 263-416 (496)
54 PRK05851 long-chain-fatty-acid 99.3 7.9E-10 1.7E-14 123.7 24.7 62 406-472 367-440 (525)
55 PRK10946 entE enterobactin syn 99.3 6.8E-10 1.5E-14 124.5 24.2 133 310-472 299-454 (536)
56 PLN02736 long-chain acyl-CoA s 99.3 8E-11 1.7E-15 135.5 16.9 135 311-472 376-533 (651)
57 PRK08633 2-acyl-glycerophospho 99.3 3.9E-10 8.5E-15 137.2 23.7 134 309-472 896-1064(1146)
58 PRK08974 long-chain-fatty-acid 99.3 1.7E-09 3.8E-14 121.7 27.2 132 310-472 324-477 (560)
59 PRK12467 peptide synthase; Pro 99.3 2.5E-10 5.5E-15 153.6 23.5 134 309-472 3349-3516(3956)
60 PRK07059 Long-chain-fatty-acid 99.3 1.6E-09 3.4E-14 122.0 26.3 131 311-472 327-480 (557)
61 PRK07769 long-chain-fatty-acid 99.3 1.2E-09 2.6E-14 125.2 25.6 63 405-472 412-508 (631)
62 PRK07787 acyl-CoA synthetase; 99.3 1.5E-09 3.1E-14 119.7 25.5 133 310-472 240-396 (471)
63 TIGR01217 ac_ac_CoA_syn acetoa 99.2 1.5E-09 3.3E-14 125.0 26.4 152 408-586 461-646 (652)
64 TIGR03208 cyc_hxne_CoA_lg cycl 99.2 1.3E-09 2.9E-14 122.0 24.9 132 310-472 309-462 (538)
65 PRK07470 acyl-CoA synthetase; 99.2 1.3E-09 2.7E-14 121.7 24.4 133 309-472 278-439 (528)
66 PRK08043 bifunctional acyl-[ac 99.2 8.9E-10 1.9E-14 128.3 23.7 45 424-472 592-636 (718)
67 PRK13383 acyl-CoA synthetase; 99.2 2.1E-09 4.6E-14 119.8 25.3 132 310-472 291-441 (516)
68 TIGR03443 alpha_am_amid L-amin 99.2 2.5E-10 5.5E-15 141.9 19.3 137 309-472 527-723 (1389)
69 PRK12492 long-chain-fatty-acid 99.2 8.9E-09 1.9E-13 116.2 30.2 130 311-471 333-485 (562)
70 TIGR02275 DHB_AMP_lig 2,3-dihy 99.2 2.6E-09 5.6E-14 119.4 25.6 133 310-472 298-453 (527)
71 PLN02387 long-chain-fatty-acid 99.2 2E-10 4.4E-15 133.3 16.9 134 311-471 420-580 (696)
72 PRK08279 long-chain-acyl-CoA s 99.2 3.2E-09 6.9E-14 120.8 26.0 144 310-472 313-484 (600)
73 PRK08751 putative long-chain f 99.2 2.1E-09 4.5E-14 121.0 24.2 132 310-472 328-482 (560)
74 PRK08315 AMP-binding domain pr 99.2 3.4E-09 7.3E-14 119.1 25.9 135 310-472 314-472 (559)
75 COG1022 FAA1 Long-chain acyl-C 99.2 1.6E-10 3.4E-15 130.5 14.8 133 312-491 354-506 (613)
76 PLN02330 4-coumarate--CoA liga 99.2 2.3E-09 5.1E-14 120.4 24.4 123 324-472 316-462 (546)
77 COG0365 Acs Acyl-coenzyme A sy 99.2 3E-09 6.5E-14 118.5 24.8 133 308-472 287-441 (528)
78 PLN02861 long-chain-fatty-acid 99.2 9.8E-11 2.1E-15 135.1 13.4 60 408-471 462-538 (660)
79 PRK12467 peptide synthase; Pro 99.2 6.5E-10 1.4E-14 149.7 22.7 133 310-472 770-935 (3956)
80 PRK06087 short chain acyl-CoA 99.2 8.9E-10 1.9E-14 123.6 20.5 131 310-472 301-455 (547)
81 PRK12316 peptide synthase; Pro 99.2 1.2E-09 2.7E-14 149.7 24.9 133 310-472 2260-2426(5163)
82 PRK03640 O-succinylbenzoic aci 99.2 5.4E-09 1.2E-13 115.0 25.5 63 406-472 327-405 (483)
83 PRK12406 long-chain-fatty-acid 99.2 1.6E-08 3.4E-13 112.4 28.6 131 311-472 271-424 (509)
84 PRK13388 acyl-CoA synthetase; 99.2 7.1E-10 1.5E-14 124.6 17.8 132 324-472 276-425 (540)
85 TIGR01923 menE O-succinylbenzo 99.2 6.6E-09 1.4E-13 112.7 24.2 59 410-472 291-365 (436)
86 PRK06710 long-chain-fatty-acid 99.2 8.1E-09 1.8E-13 116.4 25.8 132 311-472 323-476 (563)
87 PRK07768 long-chain-fatty-acid 99.1 1E-08 2.2E-13 115.0 25.6 131 406-553 381-527 (545)
88 PTZ00342 acyl-CoA synthetase; 99.1 6.3E-10 1.4E-14 129.9 16.2 135 309-472 459-616 (746)
89 PLN03052 acetate--CoA ligase; 99.1 1.4E-08 2.9E-13 118.8 27.2 44 425-472 591-634 (728)
90 PRK12316 peptide synthase; Pro 99.1 2.9E-09 6.4E-14 146.1 24.7 133 310-472 4808-4974(5163)
91 TIGR02262 benz_CoA_lig benzoat 99.1 1.5E-08 3.2E-13 112.6 26.1 132 311-472 278-429 (508)
92 PRK08308 acyl-CoA synthetase; 99.1 1.2E-08 2.6E-13 110.6 24.6 59 408-472 278-336 (414)
93 PRK06188 acyl-CoA synthetase; 99.1 1.1E-08 2.4E-13 114.1 24.4 63 406-472 360-438 (524)
94 PRK07824 O-succinylbenzoic aci 99.1 9.7E-09 2.1E-13 109.1 22.8 44 424-472 235-278 (358)
95 PRK05691 peptide synthase; Val 99.1 4.6E-09 1E-13 142.7 24.7 133 310-472 1387-1550(4334)
96 KOG1176 Acyl-CoA synthetase [L 99.1 5.9E-09 1.3E-13 116.6 21.4 135 309-472 297-453 (537)
97 PRK08276 long-chain-fatty-acid 99.1 4.1E-08 8.9E-13 108.8 27.2 131 310-472 261-414 (502)
98 PRK08008 caiC putative crotono 99.1 3.7E-08 8E-13 109.6 26.7 121 324-472 300-443 (517)
99 PRK06814 acylglycerophosphoeth 99.1 8.3E-09 1.8E-13 126.0 23.4 127 311-472 907-1055(1140)
100 PRK05857 acyl-CoA synthetase; 99.1 4.3E-09 9.4E-14 118.2 19.3 64 405-472 368-447 (540)
101 PRK05691 peptide synthase; Val 99.1 5.4E-09 1.2E-13 142.1 23.7 133 310-472 3982-4147(4334)
102 PRK12476 putative fatty-acid-- 99.1 1.8E-08 4E-13 115.0 24.5 65 405-474 423-522 (612)
103 PTZ00216 acyl-CoA synthetase; 99.1 4.1E-09 8.9E-14 122.5 19.0 62 407-472 503-582 (700)
104 PRK07445 O-succinylbenzoic aci 99.1 1.2E-08 2.6E-13 112.5 21.7 61 408-472 298-369 (452)
105 PRK05620 long-chain-fatty-acid 99.1 2.2E-08 4.8E-13 113.3 23.9 44 425-472 432-475 (576)
106 PRK05850 acyl-CoA synthetase; 99.1 3E-08 6.5E-13 112.1 24.8 63 405-472 391-481 (578)
107 PRK08180 feruloyl-CoA synthase 99.1 4.2E-09 9.1E-14 120.4 18.0 63 409-471 409-491 (614)
108 PRK07008 long-chain-fatty-acid 99.1 2.4E-08 5.3E-13 112.1 23.7 135 310-472 292-454 (539)
109 PLN02430 long-chain-fatty-acid 99.0 2.5E-09 5.4E-14 123.6 15.8 61 407-471 461-538 (660)
110 PRK06018 putative acyl-CoA syn 99.0 7.7E-08 1.7E-12 108.0 26.8 59 410-472 383-455 (542)
111 PRK12582 acyl-CoA synthetase; 99.0 4.4E-09 9.5E-14 120.5 16.7 64 407-470 419-502 (624)
112 PRK09192 acyl-CoA synthetase; 99.0 2.4E-08 5.2E-13 113.2 22.5 62 406-472 406-483 (579)
113 PRK06178 acyl-CoA synthetase; 99.0 1E-07 2.2E-12 107.6 27.3 123 324-472 340-487 (567)
114 PRK07798 acyl-CoA synthetase; 99.0 8.1E-08 1.8E-12 106.7 25.8 133 311-472 296-453 (533)
115 PF00501 AMP-binding: AMP-bind 99.0 1.1E-08 2.3E-13 110.3 17.4 120 309-456 275-417 (417)
116 PLN03102 acyl-activating enzym 99.0 1.3E-08 2.9E-13 115.5 18.9 60 409-472 390-465 (579)
117 KOG1256 Long-chain acyl-CoA sy 98.9 7.2E-09 1.6E-13 116.5 12.7 135 308-472 416-573 (691)
118 KOG1177 Long chain fatty acid 98.9 4.9E-09 1.1E-13 112.1 10.7 64 405-472 426-506 (596)
119 PRK08162 acyl-CoA synthetase; 98.9 3.9E-07 8.4E-12 102.2 24.6 59 410-472 387-461 (545)
120 PRK09029 O-succinylbenzoic aci 98.8 3E-07 6.5E-12 100.9 21.7 44 424-472 333-376 (458)
121 PRK13390 acyl-CoA synthetase; 98.7 8.2E-07 1.8E-11 98.5 21.5 130 311-472 270-424 (501)
122 PRK13391 acyl-CoA synthetase; 98.7 6.1E-07 1.3E-11 99.8 19.3 130 311-472 275-427 (511)
123 PLN02479 acetate-CoA ligase 98.7 4.1E-07 8.8E-12 102.9 17.2 59 410-472 401-475 (567)
124 TIGR02372 4_coum_CoA_lig 4-cou 98.7 7.4E-07 1.6E-11 96.6 17.2 45 424-472 276-320 (386)
125 PRK07868 acyl-CoA synthetase; 98.6 1.1E-06 2.3E-11 106.4 19.3 147 310-472 719-881 (994)
126 KOG1179 Very long-chain acyl-C 98.6 7.1E-06 1.5E-10 90.0 22.2 229 319-575 363-623 (649)
127 KOG1175 Acyl-CoA synthetase [L 98.6 3.5E-06 7.7E-11 95.1 19.6 231 311-587 359-623 (626)
128 KOG1180 Acyl-CoA synthetase [L 98.5 5.7E-06 1.2E-10 90.4 18.3 147 312-493 403-574 (678)
129 PF04443 LuxE: Acyl-protein sy 98.2 9.4E-05 2E-09 79.5 18.9 86 32-132 30-116 (365)
130 PTZ00297 pantothenate kinase; 96.4 0.042 9E-07 68.8 14.5 54 411-471 825-881 (1452)
131 COG1020 EntF Non-ribosomal pep 96.2 0.031 6.8E-07 64.2 11.4 62 406-471 562-640 (642)
132 PF14535 AMP-binding_C_2: AMP- 96.1 0.0061 1.3E-07 52.9 3.8 82 457-554 1-84 (96)
133 PRK09188 serine/threonine prot 92.3 0.59 1.3E-05 50.5 9.0 40 424-472 210-252 (365)
134 KOG1178 Non-ribosomal peptide 73.3 2.7 5.8E-05 51.0 3.2 45 424-472 455-499 (1032)
135 PF11454 DUF3016: Protein of u 53.1 39 0.00084 31.6 6.2 58 406-465 47-114 (141)
136 cd04931 ACT_PAH ACT domain of 50.9 69 0.0015 27.4 7.0 58 462-525 25-82 (90)
137 cd04880 ACT_AAAH-PDT-like ACT 40.9 1.2E+02 0.0027 24.2 6.8 55 464-523 12-66 (75)
138 PF01797 Y1_Tnp: Transposase I 37.9 1.4E+02 0.0031 26.0 7.4 102 444-558 7-117 (121)
139 PF09926 DUF2158: Uncharacteri 37.5 31 0.00067 26.7 2.5 19 425-446 1-19 (53)
140 COG2139 RPL21A Ribosomal prote 36.6 25 0.00055 30.5 2.0 35 423-457 31-68 (98)
141 COG5475 Uncharacterized small 34.9 40 0.00088 26.3 2.7 24 425-451 5-28 (60)
142 PRK04306 50S ribosomal protein 31.8 34 0.00074 29.9 2.1 36 423-458 33-71 (98)
143 PTZ00189 60S ribosomal protein 28.4 42 0.00091 31.9 2.3 34 424-457 33-69 (160)
144 PRK13390 acyl-CoA synthetase; 27.3 29 0.00063 38.3 1.2 20 106-126 150-169 (501)
145 cd04905 ACT_CM-PDT C-terminal 25.5 3.5E+02 0.0076 21.9 7.2 45 478-523 24-68 (80)
146 PRK11899 prephenate dehydratas 24.4 5.1E+02 0.011 27.0 9.7 57 462-523 205-261 (279)
147 PF12401 DUF3662: Protein of u 24.4 27 0.00058 31.4 0.2 88 454-552 18-107 (116)
148 PLN00190 60S ribosomal protein 24.0 56 0.0012 31.1 2.2 34 424-457 33-69 (158)
149 cd04866 LigD_Pol_like_3 LigD_P 23.4 58 0.0013 32.8 2.3 46 103-149 124-171 (223)
150 PRK13391 acyl-CoA synthetase; 23.3 68 0.0015 35.5 3.2 20 106-126 156-175 (511)
151 cd04904 ACT_AAAH ACT domain of 22.9 3E+02 0.0065 22.2 6.2 41 462-507 11-51 (74)
152 PRK11898 prephenate dehydratas 22.3 4.7E+02 0.01 27.2 9.0 57 462-523 208-264 (283)
153 COG0077 PheA Prephenate dehydr 21.5 5.8E+02 0.012 26.7 9.2 57 462-523 205-261 (279)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=2.4e-128 Score=1064.31 Aligned_cols=573 Identities=36% Similarity=0.689 Sum_probs=534.0
Q ss_pred CCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCChHhHhhhcCccCCCCCCCcChHHHhhcCCCCCcccchHHHHHH
Q 007568 13 GNNYECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRI 92 (598)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~~~~~~~~g~~~i~~~edF~~~vPl~~Yed~~p~ieR~ 92 (598)
+++.+.+.++.++..++||.++|+++|++||++|++|+|||+| ||++|+++++||++|||++|||++|||+||
T Consensus 17 ~~~~~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~-------~f~~i~~~~~F~~~VPv~~Yedl~pyI~Ri 89 (612)
T PLN02620 17 LAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRH-------GLNGRTDRETFKKVMPVITYEDIQPDINRI 89 (612)
T ss_pred cccchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhc-------CCCCCCCHHHHHHhCCCccHHHhHHHHHHH
Confidence 3444467789999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred hcCCCCCCccccccceeecccccCCCcccccccChhhHHHHHHHHHHHHHHHHhcCC-CCCCCceEEEeccCCccccCCC
Q 007568 93 ADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYP-IREGGRILEFIYSSKQFKTKGG 171 (598)
Q Consensus 93 ~~Ge~~~ll~~~~i~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~P-~~~~gk~l~~~~~~~~~~t~~G 171 (598)
++||.++|||++||.+|++|||||+|++|+||+|+++++.++.++.+|..++++++| +. .||.|++++.+.+.+|++|
T Consensus 90 ~~Ge~s~vL~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~~~~~~~~~~~p~l~-~Gk~~~~~~~~~~~~T~~G 168 (612)
T PLN02620 90 ANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLE-KGKGMYFLFIKSEAKTPGG 168 (612)
T ss_pred HcCCCCCccCCCChhhhhhcCCCCCCceeeeecCHHHHHHHHHHHHHHHHHHHhhCCCcc-cCcEEEEEecccCccCCCC
Confidence 999977999999999999999999889999999999999888889999999999888 77 8999999999999999999
Q ss_pred ceEeccccccccchhHhhhhhhhhcccCChhhhhccCChHHHHHHHHHhcccCCCCceEEEecchhHHHHHHHHHHHhHH
Q 007568 172 LTAGTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQ 251 (598)
Q Consensus 172 ip~g~~S~~~~~~~~f~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~~L~~~~~l~~i~~~f~~~l~~~~~~le~~w~ 251 (598)
||+|++|+.++++.+|+.++......|++|.++++++|..++|||||||+|.++++|..++++|+++|+.++++|+++|+
T Consensus 169 ip~g~~st~~y~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~ 248 (612)
T PLN02620 169 LVARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWT 248 (612)
T ss_pred cccccccchhhhhhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHH
Confidence 99999999999999998888777778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCcHHHHHhhhccCCCCHHHHHHHHHHhcccccCCccCcccccCCCCceeEEEEccChHHHHHHH
Q 007568 252 DICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKL 331 (598)
Q Consensus 252 el~~dI~~g~~~~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~~~~gi~~~lwP~l~~i~~~~~g~~~~y~~~l 331 (598)
+||+||++|+++ .+++++++|+++.+.|+|||++|+.|+.+|.+ + +|.|++++|||||++|+||++|+|++|.+.|
T Consensus 249 ~L~~DI~~G~ls-~~itd~~~R~av~~~L~p~pelA~~i~~~c~~-~--~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L 324 (612)
T PLN02620 249 LLCRDIRTGTID-SQITDPSVREAVMKILKPDPKLADFVEAECRK-E--SWQGIITRLWPNTKYVDVIVTGTMSQYIPTL 324 (612)
T ss_pred HHHHHHhcCCCC-ccCCCHHHHHHHHhhcCCCHHHHHHHHHHhcc-c--cccCcHHHhCCCCcEEEEECCCCHHHHHHHH
Confidence 999999999999 88999999999999999999999999999998 5 8999999999999999999999999999999
Q ss_pred HHHhCCCCeecCcccCCCcceeecCCCCCCCCCcceeeecCceEEEEEecCCcccCCC-----CCCCCCCCCccccCCCC
Q 007568 332 RHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCN-----SAIDDFIEDEPVPLSQV 406 (598)
Q Consensus 332 ~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~-----~~~~~~~~~~~l~~~ev 406 (598)
+.|+||+|+++.+|+||||++|+|++|.|+++...|.+.|+.+||||||+++.+.... ...+..+++++|+++||
T Consensus 325 ~~y~gglpl~~~~Y~ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ev 404 (612)
T PLN02620 325 DYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVDLVDV 404 (612)
T ss_pred HHHcCCCccccccccccceEEEeccCCCCCcccceeeecCCcEEEEEeeccCcccccccccccccccccccCccccHHHc
Confidence 9999999999999999999999999999988888999999999999999875321000 00011245778999999
Q ss_pred CCCCeEEEEEcccCceeccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeee
Q 007568 407 KLGQEYEIVLTSFTGLYRYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDF 486 (598)
Q Consensus 407 e~G~~yeLVvTt~~Gl~RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f 486 (598)
+.|++|||||||++||||||+||||+|+||||++|+|+|+||.+.+++++|||++|++|..||.++...|...+++|+||
T Consensus 405 ~~G~~YelvvTt~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~dy 484 (612)
T PLN02620 405 KLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEY 484 (612)
T ss_pred cCCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcccCceeeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999998775568999999
Q ss_pred EEeeccCCCCceEEEEEEec--CC--CccchHHHHHHHHHhhcCCchhHhhhhcC-CcCCeEEEEeccchHHHHHHHHhc
Q 007568 487 TSHADIVNQPGHYIIYWEIK--GD--VEEGVLNQCCHEMDVSFVDPGYVVSRRTN-SIGPLELCIVKRGAFRMILDYFVG 561 (598)
Q Consensus 487 ~~~~~~~~~~~~Y~~~vE~~--~~--~~~~~l~~~~~~ld~~l~n~~Y~~~R~~g-~l~p~~v~~v~~g~f~~~~~~~~~ 561 (598)
++++|.+..||||++|||+. ++ ++...+++||..||++| |.+|+.+|..+ +|+|++|++|++|||+.+++++++
T Consensus 485 ts~~d~~~~PghYvl~~El~~~~~~~~~~~~l~~cc~~lE~~L-n~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~ 563 (612)
T PLN02620 485 TSYADTSTIPGHYVLFWELCLNGSTPIPPSVFEDCCLTIEESL-NSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAIS 563 (612)
T ss_pred EeccccCCCCCceEEEEEEecCCCCCCCHHHHHHHHHHHHHHh-CHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHH
Confidence 99999888999999999983 22 35668999999999998 99999999986 599999999999999999999999
Q ss_pred CCCCCCCCCCCcccCCHHHHHHHhhccccccccccCC
Q 007568 562 NGAALSQFKTPRCTSNQVLVRILNDWTIKRFHSTAYC 598 (598)
Q Consensus 562 ~G~~~~Q~K~Pr~~~~~~~~~~l~~~~~~~~~~~~~~ 598 (598)
+|++.+|||+|||+++++++++|+++|+++|+|++++
T Consensus 564 ~G~s~~QyK~Pr~v~~~~~~~~l~~~v~~~~~s~~~~ 600 (612)
T PLN02620 564 LGASINQYKTPRCVKFAPIIELLNSRVVSNYFSPKCP 600 (612)
T ss_pred cCCccccccCceEecCHHHHHHHHhhhheeeccccCC
Confidence 9999999999999999999999999999999999864
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=4e-125 Score=1041.21 Aligned_cols=573 Identities=35% Similarity=0.672 Sum_probs=527.3
Q ss_pred cCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCChHhHhhhcCccCCCCCCCcChHHHhhcCCCCCcccchHHHHH
Q 007568 12 YGNNYECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQR 91 (598)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~~~~~~~~g~~~i~~~edF~~~vPl~~Yed~~p~ieR 91 (598)
+-++.+++.++.++..++||.++|+++|++||++|++|+|||+| .+ +|.++++||++|||++|||++|||+|
T Consensus 5 ~~~~~~~~~~~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~-------~~-~i~~~e~Fk~~VPv~~Yedl~pyI~R 76 (606)
T PLN02247 5 YDPNDNEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSF-------LD-GESDKQSFKNKVPVVNYEDIKPCIER 76 (606)
T ss_pred cCCcchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhhhhc-------Cc-cCCCHHHHHHhCCCccHHHhHHHHHH
Confidence 33444577899999999999999999999999999999999988 66 89999999999999999999999999
Q ss_pred HhcCCCCCCccccccceeecccccCCCcccccccChhhHHHHHHHHHHHHHHHHhcCC-CCCCCceEEEeccCCccccCC
Q 007568 92 IADGDTASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYP-IREGGRILEFIYSSKQFKTKG 170 (598)
Q Consensus 92 ~~~Ge~~~ll~~~~i~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~P-~~~~gk~l~~~~~~~~~~t~~ 170 (598)
|++|+.+++++++||.+|++|||||+|++|+||+|++++..+..++.+|..++++..| +. .||.|++++.+.+.+|++
T Consensus 77 i~~Ge~~~llt~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~l~~~~~~~~~p~l~-~Gk~~~~~~~~~~~~T~~ 155 (606)
T PLN02247 77 IANGESSSIISAQPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLD-QGKGMYLLFIKPEISTPS 155 (606)
T ss_pred HHcCCCCceeCCCCcceeeccCCCCCCceeEeeccHHHHHHHHHHHHHHHHHHHhcCCCcc-cCcEEEEEecCcCccCCC
Confidence 9999966677899999999999999889999999999998887789999999999877 77 899999999999999999
Q ss_pred CceEeccccccccchhHhhhhhhhhcccCChhhhhccCChHHHHHHHHHhcccCCCCceEEEecchhHHHHHHHHHHHhH
Q 007568 171 GLTAGTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECW 250 (598)
Q Consensus 171 Gip~g~~S~~~~~~~~f~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~~L~~~~~l~~i~~~f~~~l~~~~~~le~~w 250 (598)
|+|+|++|+.++++.+|+.++......|++|.++++++|..|+|||||||+|.+++++..++++|+++++.++++|+++|
T Consensus 156 Gip~g~~~t~y~~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~w 235 (606)
T PLN02247 156 GLMARPVLTSYYKSSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHW 235 (606)
T ss_pred CcccccccchhhccccccccccccccceeCcHHhhcCCCHHHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHH
Confidence 99999999999999999877765556899999999999999999999999999998999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCCCcHHHHHhhhccC-CCCHHHHHHHHHHhcccccCCccCcccccCCCCceeEEEEccChHHHHH
Q 007568 251 QDICIDVREGSLSSSRITLPKMRKAVLDTI-SPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLK 329 (598)
Q Consensus 251 ~el~~dI~~g~~~~~~~~~~~~r~~l~~~l-~~~p~~A~~L~~~~~~~~~~~~~gi~~~lwP~l~~i~~~~~g~~~~y~~ 329 (598)
++||+||++|+++ .++++|.+|+++.+.+ +|+|++|++|+++|.+ + +|.|++++|||||++|+||++|+|++|.+
T Consensus 236 e~L~~DI~~G~ls-~~it~p~~R~a~~~~l~~p~peLA~~l~~~c~~-~--~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~ 311 (606)
T PLN02247 236 KELCSNIRTGCVS-DWITDPSCRNAVSSILSKPNSELADLIESECSG-K--SWEGIIKRLWPRTKYIEVIVTGSMAQYIP 311 (606)
T ss_pred HHHHHHHhcCCcc-cccCCHHHHHHHhhcccCCCHHHHHHHHHHhcc-c--CccccHHHhCCCCcEEEEECCCCHHHHHH
Confidence 9999999999999 8899999999999999 6999999999999987 4 89999999999999999999999999999
Q ss_pred HHHHHhCCCCeecCcccCCCcceeecCCCCCCCCCcceeeecCceEEEEEecCCcccCC-----CCCCCC-----CCCCc
Q 007568 330 KLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDC-----NSAIDD-----FIEDE 399 (598)
Q Consensus 330 ~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~-----~~~~~~-----~~~~~ 399 (598)
.|+.|+||+|+++.+|+||||++|+|++|.|+++...|.+.|+.+||||||.++.+.+. .+..+. .+++.
T Consensus 312 ~L~~y~gglpl~s~~Y~sSE~~~ginl~p~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (606)
T PLN02247 312 TLEFYSGGLPLVSTMYASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNNGEVIHFVQCNGTDDDDDALKEDLE 391 (606)
T ss_pred HHHHHcCCCceecccccccceEEEeccCcCCCccCCceeecCCcEEEEEeecCCCcccccccccccccccccccccccCc
Confidence 99999999999999999999999999999998888899999999999999977532100 000000 13456
Q ss_pred cccCCCCCCCCeEEEEEcccCceeccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHHHhhhhcc
Q 007568 400 PVPLSQVKLGQEYEIVLTSFTGLYRYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKT 479 (598)
Q Consensus 400 ~l~~~eve~G~~yeLVvTt~~Gl~RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~ 479 (598)
+|+++||+.|+.|||||||++||||||+||||+|+||||++|+|+|+||.+.++++.|||++|+++..||.++...|...
T Consensus 392 ~v~l~evk~G~~YelVvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~~ 471 (606)
T PLN02247 392 IVDLVDVKVGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPL 471 (606)
T ss_pred eecHHHccCCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998766556
Q ss_pred CCeeeeeEEeeccCCCCceEEEEEEecC-------CCccchHHHHHHHHHhhcCCchhHhhhhcC-CcCCeEEEEeccch
Q 007568 480 GAELVDFTSHADIVNQPGHYIIYWEIKG-------DVEEGVLNQCCHEMDVSFVDPGYVVSRRTN-SIGPLELCIVKRGA 551 (598)
Q Consensus 480 g~~l~~f~~~~~~~~~~~~Y~~~vE~~~-------~~~~~~l~~~~~~ld~~l~n~~Y~~~R~~g-~l~p~~v~~v~~g~ 551 (598)
++.++||++++|.+..||||++|||+.. +.+...+++||..||++| |.+|+.+|..| +|+|++|++|++||
T Consensus 472 ~~~l~d~ts~~d~~~~PghYvlf~El~~~~~~~~~~~~~~~l~~cc~~lE~~L-n~~Yr~~R~~~~~igPLeirvv~~Gt 550 (606)
T PLN02247 472 GFLLTEYTSYADTSSIPGHYVLFWELKTRGSNDPPELDPKIMEQCCSTVEESL-DSVYRRCRKRDKSIGPLEIRVVKHGT 550 (606)
T ss_pred CeeeeeeecccccCCCCCceEEEEEeecCCCCccccchHHHHHHHHHHHHHHh-hHHHHHHhhccCcCCCcEEEEeCCCh
Confidence 8899999999998889999999999952 123568899999999998 99999999985 99999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCcccCCHHHHHHHhhccccccccccCC
Q 007568 552 FRMILDYFVGNGAALSQFKTPRCTSNQVLVRILNDWTIKRFHSTAYC 598 (598)
Q Consensus 552 f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~~~~~~~~~~~~ 598 (598)
|+.++++++++|++.+|||+|||+++++++++|+++|+++|+|++++
T Consensus 551 F~~l~~~~~~~G~s~~Q~K~Pr~v~~~~~~~~l~~~v~~~~~s~~~~ 597 (606)
T PLN02247 551 FDALMDFCVSQGSSVNQYKTPRCIKSEEALKILDSRVIGRFFSKRVP 597 (606)
T ss_pred HHHHHHHHHHcCCCcccccCceEecCHHHHHHHHhhhheeeccccCC
Confidence 99999999999999999999999999999999999999999999864
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=5e-118 Score=993.23 Aligned_cols=557 Identities=34% Similarity=0.692 Sum_probs=511.3
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCChHhHhhhcCccCCCCCCCcChHHHhhcCCCCCcccchHHHHHHhcCCC
Q 007568 18 CDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRIADGDT 97 (598)
Q Consensus 18 ~~~~~~~~~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~~~~~~~~g~~~i~~~edF~~~vPl~~Yed~~p~ieR~~~Ge~ 97 (598)
++.++.++..++||.++|+++|++||++|++|+|||+| ||++|+++++||++|||++|||++|||+||++||.
T Consensus 21 ~~~l~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~-------gf~~i~~~~~F~~~VPv~~Yedl~pyIeRi~~Ge~ 93 (597)
T PLN02249 21 VKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRF-------DLNGAVDRKTFKSKVPVVTYEDLKTEIQRISNGDR 93 (597)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhc-------CCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCC
Confidence 56689999999999999999999999999999999999 99999999999999999999999999999999997
Q ss_pred CCCccccccceeecccccCCCcccccccChhhHHH--HHHHHHHHHHHHHhcCC-CCCCCceEEEeccCCccccCCCceE
Q 007568 98 ASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQT--TLQIFRLAAAYRSRVYP-IREGGRILEFIYSSKQFKTKGGLTA 174 (598)
Q Consensus 98 ~~ll~~~~i~~f~~TSGTT~G~~K~IP~T~~~l~~--~~~~~~~~~~~~~~~~P-~~~~gk~l~~~~~~~~~~t~~Gip~ 174 (598)
++|||++||.+|++|||||+|++|+||+|+++++. +..++.+| ..+..+| +. .||.|++++...+.+|.+|+|+
T Consensus 94 ~~vL~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~~~~~~~~~~~~--~~~~~~~~l~-~Gk~l~~~~~~~~~~t~gG~p~ 170 (597)
T PLN02249 94 SPILSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMP--VMNLYVPGLD-KGKGLYFLFVKSESKTSGGLPA 170 (597)
T ss_pred CceeCCCchhhhcccCCCCCCceeEEeccHHHHHHHHHHHHHHHH--HHhccCCccc-cCcEEEEEeccccccCCCCCcc
Confidence 77999999999999999999999999999999983 44446666 3344456 76 8999998888889999999999
Q ss_pred eccccccccchhHhhhhhhhhcccCChhhhhccCChHHHHHHHHHhcccCCCCceEEEecchhHHHHHHHHHHHhHHHHH
Q 007568 175 GTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDIC 254 (598)
Q Consensus 175 g~~S~~~~~~~~f~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~~L~~~~~l~~i~~~f~~~l~~~~~~le~~w~el~ 254 (598)
|+.++.++++..|+..+. ...|++|.+++.+.|..+++||||||||..++++..|++.||+.++.++++|+++|+++|
T Consensus 171 ~~~~~~~~~~~~f~~~~~--~~~~~~P~ev~~~~D~~~~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~~~~l~~~weel~ 248 (597)
T PLN02249 171 RPALTSYYKSDHFRTSDY--DNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELA 248 (597)
T ss_pred Cccccccccccccccccc--cccccCcHHhhcCCCHHHHHHHHHHHHHhhccccceEEEECcHHHHHHHHHHHHHHHHHH
Confidence 999988778777755443 678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCcHHHHHhhhccC-CCCHHHHHHHHHHhcccccCCccCcccccCCCCceeEEEEccChHHHHHHHHH
Q 007568 255 IDVREGSLSSSRITLPKMRKAVLDTI-SPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLRH 333 (598)
Q Consensus 255 ~dI~~g~~~~~~~~~~~~r~~l~~~l-~~~p~~A~~L~~~~~~~~~~~~~gi~~~lwP~l~~i~~~~~g~~~~y~~~l~~ 333 (598)
+||++|+++ .++++|.+|+.+...+ .|+|++|++++++|.+ . +|+|++++|||||++|+||++|++.+|++.+++
T Consensus 249 ~dI~~g~~~-~~~~~~~~~~~v~~i~g~P~~~la~~i~~~~~~-~--~~~gii~~lWPnl~~i~~~~~G~~~~Y~~~l~~ 324 (597)
T PLN02249 249 QDISTGTLS-SKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQ-E--NWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEY 324 (597)
T ss_pred HHHHhCCCc-ccccchHHHHHHHhhcCCCCHHHHHHHHHHhcc-c--cccccHHHhCCCCCeEEEEecCChHHHHHHHHH
Confidence 999999999 8899999999998888 6899999999999987 3 799999999999999999999999999999999
Q ss_pred HhCCCCeecCcccCCCcceeecCCCCCCCCCcceeeecCceEEEEEecCCcccCCCCCCCCCCCCccccCCCCCCCCeEE
Q 007568 334 YAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYE 413 (598)
Q Consensus 334 ~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~ye 413 (598)
++|++++++.+|+||||++|+|+++.|+++..+|+++|+++||||||.++..+ +..+++.+|+++|||.|+.||
T Consensus 325 ~~g~~~~~~~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ffEFiP~~~~~~------~~~~~~~~v~l~eVe~G~~Y~ 398 (597)
T PLN02249 325 YSGGLPMASTIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGD------GALDETSLVELADVEVGKEYE 398 (597)
T ss_pred HcCCCccccccccccceEEEeecCCCCCCCCcceEecCCcEEEEeeecccCCc------ccCCCCcEecHHHcCCCCeEE
Confidence 99999999999999999999999998887778999999999999999875321 001457899999999999999
Q ss_pred EEEcccCceeccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeeccC
Q 007568 414 IVLTSFTGLYRYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHADIV 493 (598)
Q Consensus 414 LVvTt~~Gl~RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~ 493 (598)
|||||++|||||++||+|+|+||+|++|+|+|+||++.++|++|||++|++++.||.++...++..|+.|.||++.++..
T Consensus 399 lVvTT~~GLyRY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~a~~~~~~~~~~v~eft~~~~~~ 478 (597)
T PLN02249 399 LVITTYAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETK 478 (597)
T ss_pred EEEEcccceeEeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHHHHHHhhhcCceEEEeEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999998766656899999999988877
Q ss_pred CCCceEEEEEEecC-C-----CccchHHHHHHHHHhhcCCchhHhhhhcC-CcCCeEEEEeccchHHHHHHHHhcCCCCC
Q 007568 494 NQPGHYIIYWEIKG-D-----VEEGVLNQCCHEMDVSFVDPGYVVSRRTN-SIGPLELCIVKRGAFRMILDYFVGNGAAL 566 (598)
Q Consensus 494 ~~~~~Y~~~vE~~~-~-----~~~~~l~~~~~~ld~~l~n~~Y~~~R~~g-~l~p~~v~~v~~g~f~~~~~~~~~~G~~~ 566 (598)
+.|+||++|||+++ + .+.+.+++||+.++++| |.+|+.+|..+ +|+||+|++|++|+|+.|+++++++|+++
T Consensus 479 ~~p~Hyvl~wei~~~~~~~~~~~~~~~~~~~~~~e~~l-n~~Y~~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~G~~~ 557 (597)
T PLN02249 479 TIPGHYVIYWELLGRDQSNALPSDEVMAKCCLEMEESL-NSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSI 557 (597)
T ss_pred CCCCceEEEEEEeccccccCCCCHHHHHHHHHHHHHHh-CHHHHHHHhcCCccCCeEEEEeCCchHHHHHHHHHhCCCcC
Confidence 77999999999832 1 35567889999999997 99999999885 99999999999999999999999999999
Q ss_pred CCCCCCcccCCHHHHHHHhhccccccccccC
Q 007568 567 SQFKTPRCTSNQVLVRILNDWTIKRFHSTAY 597 (598)
Q Consensus 567 ~Q~K~Pr~~~~~~~~~~l~~~~~~~~~~~~~ 597 (598)
||||+|||+++++++++|+++|+++|+|+++
T Consensus 558 gQ~K~Prl~~~~~~~~~l~~~~~~~~~~~~~ 588 (597)
T PLN02249 558 NQYKVPRCVSLTPIMELLDSRVVSAHFSPSL 588 (597)
T ss_pred CCcCCceEeCCHHHHHHHHhhhheeeccccC
Confidence 9999999999999999999999999999874
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=1.5e-112 Score=947.58 Aligned_cols=515 Identities=33% Similarity=0.617 Sum_probs=409.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCChHhHhhhcCccCCCCCCCcChHH--HhhcCCCCCcccchHHHHHHhcCCC
Q 007568 20 IIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTKIQDMDACEMETL--YTSLVPLASHADLEPYIQRIADGDT 97 (598)
Q Consensus 20 ~~~~~~~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~~~~~~~~g~~~i~~~ed--F~~~vPl~~Yed~~p~ieR~~~Ge~ 97 (598)
.+++|+++++||+++|+++|++||+.|++|+|||+| ||++|.+++| ||++|||++||||+|||+||++||
T Consensus 2 ~l~~f~~~~~~~~~~Q~~~L~~iL~~n~~T~yGr~~-------gf~~i~s~ed~~Fr~~VPi~~Yed~~pyIeR~~~Ge- 73 (528)
T PF03321_consen 2 VLKRFEKATKNPEQVQEEVLREILRRNADTEYGRDH-------GFAGIRSVEDESFRKRVPITDYEDYRPYIERIAEGE- 73 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHCTTSHHHHCT-------T--S----HHHHHHHHS--BEHHHHHHHHHHHHTT--
T ss_pred hHHHHHHHHhCHHHHHHHHHHHHHHhhccCHhHHhc-------CCCCCCCcchHHHHHhCCCccHHHHHHHHHHHhcCC-
Confidence 378999999999999999999999999999999999 9999999999 999999999999999999999999
Q ss_pred CCCccccccceeecccccCCCcccccccChhhHHHHH--HHHHHHHHHHHhcCC-CCCCCceEE--EeccCCccccCCCc
Q 007568 98 ASLLTQEPITKLSLSSGTTEGRQKYVPFTKHSSQTTL--QIFRLAAAYRSRVYP-IREGGRILE--FIYSSKQFKTKGGL 172 (598)
Q Consensus 98 ~~ll~~~~i~~f~~TSGTT~G~~K~IP~T~~~l~~~~--~~~~~~~~~~~~~~P-~~~~gk~l~--~~~~~~~~~t~~Gi 172 (598)
.+|||++||.+|..||||||+++|+||+|++++..+. .++.+|..++.+++| ....||.++ +.+.+....|++|+
T Consensus 74 ~~vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~~p~~~~~gk~~~l~~~~~~~~~~t~~Gi 153 (528)
T PF03321_consen 74 ENVLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRNFPGLLFQGKSLYLSFSFAPPPLRTPGGI 153 (528)
T ss_dssp -CCTSSS--SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHHSSS--TTSE--EEEE------EE-TTS-
T ss_pred CCCCCCCCCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhcCcccccCCcceEEEeecCCCcccCCCCe
Confidence 5699999999999999999555999999999998866 457888888999999 422788444 44457788999999
Q ss_pred eEeccccccccchhHhhhhhhhhcccCChhhhhccCChHHHHHHHHHhcccCCCCceEEEecchhHHHHHHHHHHHhHHH
Q 007568 173 TAGTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQD 252 (598)
Q Consensus 173 p~g~~S~~~~~~~~f~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~~L~~~~~l~~i~~~f~~~l~~~~~~le~~w~e 252 (598)
|+|++|++++++ .+.++..+|++|.+++.+.|.++++||||+|+|.+++||++|+++||++|+.++++|+++|++
T Consensus 154 ~~g~~s~~~~~~-----~~~~~~~~~~~P~~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~ 228 (528)
T PF03321_consen 154 PIGSISGIPYRM-----IPPWFRSWFTSPSEVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEE 228 (528)
T ss_dssp EEE-HHHHHHT-------SCCHHG-BSS-HHHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred EEecccccchhh-----ChHHHccCccCCHHHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhH
Confidence 999999998874 344445689999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCcHHHHHhhhccCCCCHHHHHHHHHHhcccccCCccCcccccCCCCceeEEEEccChHHHHHHHH
Q 007568 253 ICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLR 332 (598)
Q Consensus 253 l~~dI~~g~~~~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~~~~gi~~~lwP~l~~i~~~~~g~~~~y~~~l~ 332 (598)
+|+||++|+++ .++|||+||++|+++|.+ + .+++++|||||++|+||++|++.+|+++|+
T Consensus 229 l~~dI~~G~~~---------------~~~p~p~rA~~L~~~~~~----~-~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~ 288 (528)
T PF03321_consen 229 LVEDIRDGTLS---------------LLRPNPERAAELRAEFEK----G-RGIPKRLWPNLKLVSCWGGGSMAPYAPKLR 288 (528)
T ss_dssp HHHHHHHTS-----------------C-S--HHHHHHHHHHHCC----S-TTHHHHHSTT--EEEEE-SGGGGGGHHHHH
T ss_pred hhHHhcCCccc---------------cCCCCHHHHHHHHHhhcc----c-CCCHHHhCCCCcEEEEEcCCChHHHHHHHH
Confidence 99999999988 457999999999999998 6 789999999999999999999999999999
Q ss_pred HHhCCCCeecCcccCCCcceeecCCCCCCCCCcceeeecCceEEEEEecCCcccCCCCCCCCCCCCccccCCCCCCCCeE
Q 007568 333 HYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEY 412 (598)
Q Consensus 333 ~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~y 412 (598)
+++|++++++.+|+||||++|+|++++. .+|.+.|+.+||||||+++.+++ +.+++++++++|||.|++|
T Consensus 289 ~~~g~~~~~~~~y~ASEg~i~i~~~~~~----~~~~l~~~~~ffEFip~~~~~~~------~~~~~~~l~~~ele~G~~Y 358 (528)
T PF03321_consen 289 EYFGGVPIQSKGYGASEGFIGIPLDPED----PGYVLAPDSGFFEFIPVDEDEQN------PSEQPKTLLLHELEVGEEY 358 (528)
T ss_dssp HHHTTS-EEE-EEEETTEEEEEES-CCC------EEE-TTSSEEEEEE-STT-------------SSSEEGGG--TT-EE
T ss_pred HHcCCCceeeccccccceEEEEecCCCC----CceEeecCCeEEEEEeccCCccc------ccCCCceecHHHhcCCCeE
Confidence 9999999999999999999999987443 46889999999999999865410 0146899999999999999
Q ss_pred EEEEcccCceeccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeec-
Q 007568 413 EIVLTSFTGLYRYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHAD- 491 (598)
Q Consensus 413 eLVvTt~~Gl~RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~- 491 (598)
||||||.+||||||+||||+|+||++++|+|+|+||.++++|+.|||++|.+|+.||.+++. ++|+++.+|++.++
T Consensus 359 elviTt~~GLyRY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~---~~~~~~~~f~~~~~~ 435 (528)
T PF03321_consen 359 ELVITTNSGLYRYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQ---ETGLELRDFTVAPDP 435 (528)
T ss_dssp EEEEESTTS-SSEEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHH---CTT-EEEEEEEEEE-
T ss_pred EEEEecccceeeeecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHH---hcCCceeeEEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999975 78999999999998
Q ss_pred cCCCCceEEEEEEecCCCccchHHHHHHHHHhhc--CCchhHhhhhc-CCcCCeEEEEeccchHHHHHHHHhcC-CCCCC
Q 007568 492 IVNQPGHYIIYWEIKGDVEEGVLNQCCHEMDVSF--VDPGYVVSRRT-NSIGPLELCIVKRGAFRMILDYFVGN-GAALS 567 (598)
Q Consensus 492 ~~~~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~~l--~n~~Y~~~R~~-g~l~p~~v~~v~~g~f~~~~~~~~~~-G~~~~ 567 (598)
.++.+|||++|||+... ...++.|++.||++| .|++|+.+|+. |+|+||+|++|++|+|++|+++++++ |++.+
T Consensus 436 ~~~~~~~Y~~~~e~~~~--~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~~g~f~~~~~~~~~~~G~~~~ 513 (528)
T PF03321_consen 436 SSGNPPHYVLFWELEGE--PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVRPGTFDALMERAVARLGGSAG 513 (528)
T ss_dssp -SSSSBEEEEEEEECS---HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-TTHHHHHHHHHHCT-T--SS
T ss_pred ccCCCCceEEEEEeCCC--chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeCcchHHHHHHHHhhcCCCCcc
Confidence 67889999999999665 347889999999999 59999999999 99999999999999999999999999 99999
Q ss_pred CCCCCcccCCHHHHH
Q 007568 568 QFKTPRCTSNQVLVR 582 (598)
Q Consensus 568 Q~K~Pr~~~~~~~~~ 582 (598)
|||+|||++++++.+
T Consensus 514 Q~K~pr~~~~~~~~~ 528 (528)
T PF03321_consen 514 QYKVPRLIRDREFVE 528 (528)
T ss_dssp S----SS--TCHHHH
T ss_pred ceeCccccCccccCC
Confidence 999999999999853
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=7e-28 Score=257.19 Aligned_cols=396 Identities=16% Similarity=0.174 Sum_probs=256.1
Q ss_pred HhHHHHHHHHHHHHHHH-hcCChHhHhhhcCccCCCC--CCCcChHHHhhcCCCCCcccchHHHH-HHhcCCCCCCcccc
Q 007568 29 ENAGEVQRETLRRILEQ-NYDVEYLKKRLGDTKIQDM--DACEMETLYTSLVPLASHADLEPYIQ-RIADGDTASLLTQE 104 (598)
Q Consensus 29 ~~~~~~Q~~~L~~iL~~-n~~T~ygr~~~~~~~~~g~--~~i~~~edF~~~vPl~~Yed~~p~ie-R~~~Ge~~~ll~~~ 104 (598)
+..++.|++.|+.+++. +++++|+|++ |.+. |+ ..|++.+|+. ++|+++++++|.... ++.+.. .+
T Consensus 21 ~eL~~lq~~rl~~~~k~~yeNsPfYr~~--f~~~-~v~p~~i~~l~Dl~-klP~t~K~~lre~ypf~~~~~~------~~ 90 (438)
T COG1541 21 KELEKLQEKRLKSTVKYVYENSPFYRKK--FKEA-GVDPDDIKTLEDLA-KLPFTTKDDLRENYPFGDFAVP------KE 90 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHH--HHHc-CCChHHhhCHHHHH-hCCCCcHHHHHHhCCccccccc------cc
Confidence 47788999999999995 9999999999 7766 66 5799999999 699999999987765 555544 44
Q ss_pred ccceeecccccCCCcccccccChhhHHHHHHHHH-HHHHHHHhcCCCCCCCceEEEeccCCccccCCCceEecccccccc
Q 007568 105 PITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFR-LAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYA 183 (598)
Q Consensus 105 ~i~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~-~~~~~~~~~~P~~~~gk~l~~~~~~~~~~t~~Gip~g~~S~~~~~ 183 (598)
.+.++..||||| |+|+.+|+|...+......+. .+.. .....+.|....++ -|+..|... .
T Consensus 91 ~i~~ihaSSGTT-GkPt~~~~t~~D~~~wa~~~aR~~~~-----~g~~~gd~v~~~~~--------yGl~tgg~~---~- 152 (438)
T COG1541 91 EIVRIHASSGTT-GKPTVFGYTAKDIERWAELLARSLYS-----AGVRKGDKVQNAYG--------YGLFTGGLG---L- 152 (438)
T ss_pred ceEEEEccCCCC-CCceeeecCHHHHHHHHHHHHHHHHH-----ccCCCCCEEEEEee--------eccccCCch---h-
Confidence 566799999999 999999999997654322111 1110 11221344433222 121111100 0
Q ss_pred chhHhhhhhhhhcccCChhhhhccCChHHHHHHHHHhcccCCCCceEEEecchhHHHHHHHHHHHhHHHHHHHHHhccCC
Q 007568 184 SEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVREGSLS 263 (598)
Q Consensus 184 ~~~f~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~~L~~~~~l~~i~~~f~~~l~~~~~~le~~w~el~~dI~~g~~~ 263 (598)
++... .+++ .+.+.++ .+-+.-++.|.+-.+.
T Consensus 153 --~~ga~----------------------------rig~-------~vip~~~-----------g~~~~~~~l~~df~~t 184 (438)
T COG1541 153 --HYGAE----------------------------RIGA-------TVIPISG-----------GNTERQLELMKDFKPT 184 (438)
T ss_pred --HHHHH----------------------------hhCE-------EEEccCC-----------ccHHHHHHHHHhcCCc
Confidence 00000 0000 0111111 1112222223222322
Q ss_pred CCCCCcHHHHHhhhccCCCCHHHHHHHHHHhcccccCCccCcccccCCCCceeEEEEccC---hHHHHHHHHHHhCCCCe
Q 007568 264 SSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPL 340 (598)
Q Consensus 264 ~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~~~~gi~~~lwP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i 340 (598)
.+.+.++....+|+++++. |..+.-. +++ ..+.|+ .++.++.+++.| |+++
T Consensus 185 -----------vI~~tps~~l~lae~~~~~----------G~~~~~~-~lk---~~i~gaE~~see~R~~ie~~~-g~~~ 238 (438)
T COG1541 185 -----------VIAATPSYLLYLAEEAEEE----------GIDPDKL-SLK---KGIFGAEPWSEEMRKVIENRF-GCKA 238 (438)
T ss_pred -----------EEEEChHHHHHHHHHHHHc----------CCChhhc-cee---EEEEecccCCHHHHHHHHHHh-CCce
Confidence 2444544445556665543 3222212 355 345554 889999999999 5899
Q ss_pred ecCcccCCCcc-eeecCCCCCCCCCcceeeecCceEEEEEecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc
Q 007568 341 VSADYGSTESW-IGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF 419 (598)
Q Consensus 341 ~~~~ygaSE~~-i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~ 419 (598)
+ +.||+||++ .| . .+|... .++|++.+..++|.++++. ++. |..|+.||||+||+
T Consensus 239 ~-diYGltE~~g~g-~--~eC~~~-~glhi~eD~~~~Ei~dP~t--------------~e~-----l~dge~GelV~T~L 294 (438)
T COG1541 239 F-DIYGLTEGFGPG-A--GECTER-NGLHIWEDHFIFEIVDPET--------------GEQ-----LPDGERGELVITTL 294 (438)
T ss_pred e-eccccccccCCc-c--cccccc-cCCCcchhhceeeeecCCc--------------Ccc-----CCCCCeeEEEEEec
Confidence 8 999999984 44 2 457654 3799999999999998763 444 45899999999997
Q ss_pred ----CceeccccCCEEEEccccCCCC----EE-EEEeecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEee
Q 007568 420 ----TGLYRYRLGDVVEVAGFHKGTP----KL-NFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHA 490 (598)
Q Consensus 420 ----~Gl~RYr~GDvv~v~g~~~~~P----~i-~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~ 490 (598)
..|+||+|||++.+....|.|. +| ++.||.+||+.+.|.+|++.+|+.+|.+... +.. +|.+..
T Consensus 295 ~~~~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~------~~~-~yqi~~ 367 (438)
T COG1541 295 TKEGMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPE------VTP-HYQIIL 367 (438)
T ss_pred cccCcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccC------CCc-eEEEEE
Confidence 4599999999999998776553 33 8999999999999999999999999997643 212 888876
Q ss_pred ccCCCCceEEEEEEecCC-CccchHHHHHHHHHhhcCCchhHhhhhcCCcCCeEEEEeccchHHHHHHHHhcCCCCCCCC
Q 007568 491 DIVNQPGHYIIYWEIKGD-VEEGVLNQCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVKRGAFRMILDYFVGNGAALSQF 569 (598)
Q Consensus 491 ~~~~~~~~Y~~~vE~~~~-~~~~~l~~~~~~ld~~l~n~~Y~~~R~~g~l~p~~v~~v~~g~f~~~~~~~~~~G~~~~Q~ 569 (598)
.....-..-.+-||..++ .+.....++...+...+ ..-...+++|.+|.+|+.++.. +
T Consensus 368 ~~~~~~d~L~V~vE~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~v~~v~~g~l~r~~----------~-- 426 (438)
T COG1541 368 TRNGGLDELTVRVELENEAEELEDERRLAKKLIKNI---------KSELGVRVEVELVEPGELPRTE----------G-- 426 (438)
T ss_pred ecCCCCceEEEEEEecCcccchHHHHHHHHHHHHHH---------HhhcCCceEEEEEeccceeccc----------C--
Confidence 653334567788888543 11122222223333332 3334678999999999977422 1
Q ss_pred CCCcccCCH
Q 007568 570 KTPRCTSNQ 578 (598)
Q Consensus 570 K~Pr~~~~~ 578 (598)
|.+|++.-+
T Consensus 427 K~krvvd~r 435 (438)
T COG1541 427 KAKRVVDKR 435 (438)
T ss_pred ceeEEEEec
Confidence 777776543
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.95 E-value=7.8e-27 Score=256.22 Aligned_cols=393 Identities=13% Similarity=0.077 Sum_probs=229.7
Q ss_pred HhHHHHHHHHHHHHHHH-hcCChHhHhhhcCccCCCCC--CCcChHHHhhcCCCCCcccchHHHHHHhcCCCCCCc--cc
Q 007568 29 ENAGEVQRETLRRILEQ-NYDVEYLKKRLGDTKIQDMD--ACEMETLYTSLVPLASHADLEPYIQRIADGDTASLL--TQ 103 (598)
Q Consensus 29 ~~~~~~Q~~~L~~iL~~-n~~T~ygr~~~~~~~~~g~~--~i~~~edF~~~vPl~~Yed~~p~ieR~~~Ge~~~ll--~~ 103 (598)
.+.++.|.+.|+++|+. +++++|||++ |.++ |++ .|++.+||+ ++|+++++|++..-.-.. +.=.++ +.
T Consensus 12 ~~l~~~q~~rl~~~l~~a~~~spfYr~~--~~~~-g~~p~~i~sl~dl~-~lP~~~k~~lr~~~p~~~--~~~~~~~~~~ 85 (445)
T TIGR03335 12 GELDALVEERIRYTVHYAAEHSPFYKKW--FQEN-NISPSDIKSHEDLL-ELPVISGEVIRKNQPPVT--DDFMFKSADW 85 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHH--HHHc-CCChhhCCCHHHHH-HCCCCCHHHHHhcCCccc--cccccccCCH
Confidence 46788999999999996 6899999999 7777 774 799999999 599999999976531000 000111 33
Q ss_pred cccceeecccccCCCcccccccChhhHHHHHHHHHHHHHHHHhcCCCCCCCceEEEeccCCccccCCCceEecccccccc
Q 007568 104 EPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYA 183 (598)
Q Consensus 104 ~~i~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~P~~~~gk~l~~~~~~~~~~t~~Gip~g~~S~~~~~ 183 (598)
+.+..+..||||| |+||.+++|++.+......+... .....+....+.+.++. -|.-.|. ..+
T Consensus 86 ~~i~~i~~TSGTT-G~Pk~v~~T~~dl~~~~~~~~r~----~~~~G~~~gD~vl~~~~--------~~~~~g~---~~~- 148 (445)
T TIGR03335 86 KDIYTIHETSGTS-GTPKSFFLTWDDWKRYAEKYARS----FVSQGFTAGDRMVICAS--------YGMNVGA---NTM- 148 (445)
T ss_pred HHeEEEEeCCCCC-CCcceeeecHHHHHHHHHHHHHH----HHHcCCCCCCeEEEEec--------CCcchhH---HHH-
Confidence 4566778899999 89999999998765432221111 01122331334333211 0100000 000
Q ss_pred chhHhhhhhhhhcccCChhhhhccCChHHHHHHHHHhcccCCCCceEEEecchhHHHHHHHHHHHhHHHHHHHHHhccCC
Q 007568 184 SEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVREGSLS 263 (598)
Q Consensus 184 ~~~f~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~~L~~~~~l~~i~~~f~~~l~~~~~~le~~w~el~~dI~~g~~~ 263 (598)
.+..+.++ ..++.... . +..++.|++..+.
T Consensus 149 ------------------------------~~~~~~~G------a~vi~~~~---~-----------~~~~~~i~~~~~t 178 (445)
T TIGR03335 149 ------------------------------TLAAREVG------MSIIPEGK---C-----------TFPIRIIESYRPT 178 (445)
T ss_pred ------------------------------HHHHHHcC------CEEEcCCc---h-----------hHHHHHHHHhCCC
Confidence 00001111 01111000 0 0112233332322
Q ss_pred CCCCCcHHHHHhhhccCCCCHHHHHHHHHHhcccccCCccCcccccCCCCceeEEEEccC---hHHHHHHHHHHhCCCCe
Q 007568 264 SSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPL 340 (598)
Q Consensus 264 ~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~~~~gi~~~lwP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i 340 (598)
.+.+.++....+|+++++. |+-+. .++++. ++.|| ....++.+++.| |+++
T Consensus 179 -----------~l~~~ps~ll~La~~~~~~----------g~~~~-~~~lr~---ii~gGE~l~~~~r~~ie~~~-g~~v 232 (445)
T TIGR03335 179 -----------GIVASVFKLLRLARRMKAE----------GIDPA-ESSIRR---LVVGGESFADESRNYVEELW-GCEV 232 (445)
T ss_pred -----------EEEECHHHHHHHHHHHHHc----------CCCcc-cCcceE---EEEcCCCCCHHHHHHHHHHh-CCcE
Confidence 1222222222233333221 22222 346774 44444 556677888888 5899
Q ss_pred ecCcccCCCcceeecCCCCCCCCCcceeeecCceEEEEEecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc-
Q 007568 341 VSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF- 419 (598)
Q Consensus 341 ~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~- 419 (598)
+ +.||+||+.++. .|.. ..++|+..+..++|+++++ +.++ |.+|+.||||||++
T Consensus 233 ~-~~YG~TE~~~~~----~c~~-~~g~h~~~d~~~vEIvDp~--------------~~~~-----vp~Ge~GELvvT~L~ 287 (445)
T TIGR03335 233 Y-NTYGSTEGTMCG----ECQA-VAGLHVPEDLVHLDVYDPR--------------HQRF-----LPDGECGRIVLTTLL 287 (445)
T ss_pred E-ecCChhhhhheE----EecC-CCCccccCCceEEEEEcCC--------------CCCC-----CcCCCceEEEEEecC
Confidence 9 999999985442 3432 2468888888899999854 1233 45899999999997
Q ss_pred -------CceeccccCCEEEEc-cccCCC----CEEEEEeecCceEeeceeecCHHHHHHHHHHHH--hhhhccCCeeee
Q 007568 420 -------TGLYRYRLGDVVEVA-GFHKGT----PKLNFVCRRKLILTVNIDKNTEKDLQLVVDRGS--QLLNKTGAELVD 485 (598)
Q Consensus 420 -------~Gl~RYr~GDvv~v~-g~~~~~----P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~~--~~l~~~g~~l~~ 485 (598)
..|+||||||++++. ...|.| |+|..+||.+||++++|.+|++.+|+++|.+.. ..+ ++ +
T Consensus 288 ~~~~r~~~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~--~~----~ 361 (445)
T TIGR03335 288 KPGERCGSLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSL--TG----E 361 (445)
T ss_pred CCCccCCceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCC--Cc----c
Confidence 449999999999974 355544 567778999999999999999999999998741 211 22 6
Q ss_pred eEEeeccCC-CCceEEEEEEecCCCccchHHHHHHHHHhhcCCchhHhhh---hcCCcCCeEEEEeccchHHH
Q 007568 486 FTSHADIVN-QPGHYIIYWEIKGDVEEGVLNQCCHEMDVSFVDPGYVVSR---RTNSIGPLELCIVKRGAFRM 554 (598)
Q Consensus 486 f~~~~~~~~-~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~~l~n~~Y~~~R---~~g~l~p~~v~~v~~g~f~~ 554 (598)
|.+..+... ....-.|.+|...... ...+.+.+.+.+.+ ...++..+ +.+ .-.++|.+|++|++++
T Consensus 362 ~~~~~~~~~~~~~~~~v~~e~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 431 (445)
T TIGR03335 362 YEAFLYGEEEGEITLRVSLECEDKDN-CSIHDIQENFTGTF-LKYKPELIGSYDEG-IFQILVNFTGPGELEL 431 (445)
T ss_pred EEEEEecCCCCCceEEEEEEecCccc-chHHHHHHHHHHHH-hhhhhhhhhhhhcc-eEEEEEEEeCCCCccc
Confidence 877654321 1224456677643311 23344444454442 11122211 122 3457899999999874
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.93 E-value=4.4e-24 Score=232.37 Aligned_cols=385 Identities=17% Similarity=0.154 Sum_probs=222.0
Q ss_pred HhHHHHHHHHHHHHHHH-hcCChHhHhhhcCccCCCCC--CCcChHHHhhcCCCCCcccchHHHHH-HhcCCCCCCcccc
Q 007568 29 ENAGEVQRETLRRILEQ-NYDVEYLKKRLGDTKIQDMD--ACEMETLYTSLVPLASHADLEPYIQR-IADGDTASLLTQE 104 (598)
Q Consensus 29 ~~~~~~Q~~~L~~iL~~-n~~T~ygr~~~~~~~~~g~~--~i~~~edF~~~vPl~~Yed~~p~ieR-~~~Ge~~~ll~~~ 104 (598)
++.++.|.+.|+++|+. .++++|+|++ |.++ |+. .|++.+||+ ++|++++++++..... +.. +..+
T Consensus 6 ~~l~~~q~~~l~~~~~~a~~~~pfYr~~--~~~~-~i~~~~i~~~~dl~-~lP~~~K~~l~~~~~~~~~~------~~~~ 75 (422)
T TIGR02155 6 DELRALQTQRLKWTVKHAYENVPHYRKA--FDAA-GVHPDDLQSLSDLA-KFPFTQKHDLRDNYPFGLFA------VPRE 75 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHH--HHHc-CCChhhCCCHHHHH-HCCCCcHHHHhhcCCCcccC------CChH
Confidence 46788999999999997 6899999999 7777 774 799999998 5999999999865321 221 1233
Q ss_pred ccceeecccccCCCcccccccChhhHHHHHHHH-HHHHHHHHhcCCCCCCCceEEEeccCCccccCCCceEecccccccc
Q 007568 105 PITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIF-RLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTHYYA 183 (598)
Q Consensus 105 ~i~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~-~~~~~~~~~~~P~~~~gk~l~~~~~~~~~~t~~Gip~g~~S~~~~~ 183 (598)
.+.++..||||| |+||.+++|+..+.....+. ..+. .+.+..+.+.+..+. .|. ..+.
T Consensus 76 ~~~~~~~TSGTT-G~Pk~v~~t~~~~~~~~~~~~~~~~-----~~g~~~~d~~~~~~~--------~~~----~~~~--- 134 (422)
T TIGR02155 76 QVVRIHASSGTT-GKPTVVGYTQNDIDTWSSVVARSIR-----AAGGRPGDLIHNAYG--------YGL----FTGG--- 134 (422)
T ss_pred HcEEEEECCCCC-CCCeEeccCHHHHHHHHHHHHHHHH-----HcCCCCCcEEEEccC--------ccc----cchh---
Confidence 455677899999 89999999998764332221 1111 112221233222110 010 0000
Q ss_pred chhHhhhhhhhhcccCChhhhhccCChHHHHHHHHHhcccCCCCceEEEecchhHHHHHHHHHHHhHHHHHHHHHhccCC
Q 007568 184 SEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEECWQDICIDVREGSLS 263 (598)
Q Consensus 184 ~~~f~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~~L~~~~~l~~i~~~f~~~l~~~~~~le~~w~el~~dI~~g~~~ 263 (598)
... .|..+.++ ...+... ...-+.+++.|.+.++.
T Consensus 135 ------~~~---------------------~~~~~~~g------~~~~~~~------------~~~~~~~~~~i~~~~~t 169 (422)
T TIGR02155 135 ------LGA---------------------HYGAEKLG------CTVVPIS------------GGQTEKQVQLIQDFKPD 169 (422)
T ss_pred ------HHH---------------------HHHHHHcC------cEEEecC------------CCCHHHHHHHHHHHCCC
Confidence 000 00001111 0111100 00012344555544544
Q ss_pred CCCCCcHHHHHhhhccCCCCHHHHHHHHHHhcccccCCccCcccccCCCCceeEEEEccC--hHHHHHHHHHHhCCCCee
Q 007568 264 SSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLV 341 (598)
Q Consensus 264 ~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~~~~gi~~~lwP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~ 341 (598)
.+.++++-...+|+++.+. ++-.. .++++.| +.+|. ....++.+++.|| ++++
T Consensus 170 -----------~l~~~Ps~l~~L~~~~~~~----------~~~~~-~~~lr~i--~~~ge~l~~~~~~~i~~~~g-~~v~ 224 (422)
T TIGR02155 170 -----------IIMVTPSYMLNLLEELKRM----------GIDPA-QTSLQVG--IFGAEPWTNAMRKEIEARLG-MKAT 224 (422)
T ss_pred -----------EEEEcHHHHHHHHHHHHHc----------CCCcc-cCceEEE--EEeCCcCCHHHHHHHHHHhC-CceE
Confidence 2333332222333332211 22111 1356742 23333 6677788888885 8999
Q ss_pred cCcccCCCcc-eeecCCCCCCCCCcceeeecCceEEEEEecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcccC
Q 007568 342 SADYGSTESW-IGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFT 420 (598)
Q Consensus 342 ~~~ygaSE~~-i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~~ 420 (598)
+.||+||+. .++. ..|.....++++..+..+.|.++++ ++++ +.+|+.||||+|+..
T Consensus 225 -~~YG~tE~~~~~~~--~~~~~~~~g~~~~~~~~~~eivd~~--------------~g~~-----v~~Ge~Gelvvt~~~ 282 (422)
T TIGR02155 225 -DIYGLSEVIGPGVA--MECVETQDGLHIWEDHFYPEIIDPH--------------TGEV-----LPDGEEGELVFTTLT 282 (422)
T ss_pred -ecccchhhcCCcee--ecccccCCCceEecCeeEEEEECCC--------------CCCC-----CCCCCeeEEEEecCC
Confidence 999999962 2222 1232112457776667788888743 1333 458999999999752
Q ss_pred ----ceeccccCCEEEEccccC--CCC-EEEEEeecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeeccC
Q 007568 421 ----GLYRYRLGDVVEVAGFHK--GTP-KLNFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHADIV 493 (598)
Q Consensus 421 ----Gl~RYr~GDvv~v~g~~~--~~P-~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~ 493 (598)
.+.||+|||++++.. .| ..| .+.|+||.+|++++.|++|++.+|+.+|.+.. ++. ..|.+..+..
T Consensus 283 ~~~~p~~ry~TGDl~~~~~-~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~------~v~-~~~q~~~~~~ 354 (422)
T TIGR02155 283 KEALPVIRYRTRDLTRLLP-GTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMD------ELS-PHYQLELTRN 354 (422)
T ss_pred ccccceeeEEcCcEEEEEC-CCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCc------CcC-CCEEEEEEcC
Confidence 367999999999875 22 233 34899999999999999999999999998642 221 1465554432
Q ss_pred CCCceEEEEEEecCCCc----cchHHHHHHHHHhhcCCchhHhhhhcCCcCCeEEEEeccchHH
Q 007568 494 NQPGHYIIYWEIKGDVE----EGVLNQCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVKRGAFR 553 (598)
Q Consensus 494 ~~~~~Y~~~vE~~~~~~----~~~l~~~~~~ld~~l~n~~Y~~~R~~g~l~p~~v~~v~~g~f~ 553 (598)
..+-..++.+|...+.. .+..+.+.+.+.+.+ +...-..++|.++..|.+.
T Consensus 355 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i~~~~---------~~~~~~~~~v~~~~~~~lp 409 (422)
T TIGR02155 355 GHMDELTLKVELKPESYTLRLHEQASLLAGEIQHTI---------KQEVGVSMDVHLVEPGSLP 409 (422)
T ss_pred CCccEEEEEEEEecCcccccchHHHHHHHHHHHHHH---------HhccCcEEEEEEECCCCcc
Confidence 22235667788753311 112222334444443 2222223679999999986
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.87 E-value=1.4e-20 Score=204.87 Aligned_cols=319 Identities=16% Similarity=0.174 Sum_probs=203.4
Q ss_pred HhHHHHHHHHHHHHHHH-hcCChHhHhhhcCccCCCCCCCcChHHHhhcCCCCCcccchHHHHHHhcCC-CCC-C-----
Q 007568 29 ENAGEVQRETLRRILEQ-NYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRIADGD-TAS-L----- 100 (598)
Q Consensus 29 ~~~~~~Q~~~L~~iL~~-n~~T~ygr~~~~~~~~~g~~~i~~~edF~~~vPl~~Yed~~p~ieR~~~Ge-~~~-l----- 100 (598)
...++.|++.|+++|+. .++++|+|++ . ++ +++ .+|+++++++....+++.... ..+ .
T Consensus 22 ~~l~~~Q~~rL~~ll~~a~~~sPfYr~~-------~--~~----~l~-~lPvl~K~~~~~~fd~~~t~~l~~~~~~~~a~ 87 (430)
T TIGR02304 22 EALENWQAKQLEKFLQFVLSHSPWFQRY-------H--TI----PFN-QWPMMDKALMMEHFDELNTAGLKKDEALDCAM 87 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhhc-------c--CC----CHH-HCCCcCHHHHHHHHHHhhccCCChhhhhHHhh
Confidence 46788999999999996 6999999998 3 22 466 699999999999999998421 000 0
Q ss_pred -------cc--ccccceeecccccCCCcccccccChhhHHHHHHHHHHHHHHHHhcCC--CCCCCceEEEeccCCccccC
Q 007568 101 -------LT--QEPITKLSLSSGTTEGRQKYVPFTKHSSQTTLQIFRLAAAYRSRVYP--IREGGRILEFIYSSKQFKTK 169 (598)
Q Consensus 101 -------l~--~~~i~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~P--~~~~gk~l~~~~~~~~~~t~ 169 (598)
.. .+++ ....||||| |.|-.|.++++..... .+. .+.+..| +..++|...+..+..
T Consensus 88 ~~e~~r~f~~~~~~~-~v~~TSGSS-G~p~~f~~~~~~~~~~-~a~-----~~~~~~~~g~~~g~r~a~~~~~~~----- 154 (430)
T TIGR02304 88 RSEKTRDFKPCVGNI-SVGLSSGTS-GRRGLFVVSPEEQQMW-AGG-----ILAKVLPDGLFAKHRIAFFLRADN----- 154 (430)
T ss_pred hhhhhcccccccCcE-EEEECCCCC-CCceEEEECHHHHHHH-HHH-----HHhhhCccccccCCcEEEEEccCh-----
Confidence 00 0233 456799999 8999999999865321 111 1112222 221345544421111
Q ss_pred CCceEeccccccccchhHhhhhhhhhcccCChhhhhccCChHHHHHHHHHhcccCCCCceEEEecchhHHHHHHHHHHHh
Q 007568 170 GGLTAGTATTHYYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIVQAFTAFEEC 249 (598)
Q Consensus 170 ~Gip~g~~S~~~~~~~~f~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~~L~~~~~l~~i~~~f~~~l~~~~~~le~~ 249 (598)
..+. .....++ . +..|++. +.
T Consensus 155 ----------~ly~-----------------------------~~~~~~~---------~----------~~~~~l~-~~ 175 (430)
T TIGR02304 155 ----------NLYQ-----------------------------SVNNRWI---------S----------LDFFDLL-AP 175 (430)
T ss_pred ----------hHHH-----------------------------HHHhccc---------e----------eeecCCC-cC
Confidence 0000 0000000 0 1122334 56
Q ss_pred HHHHHHHHHhccCCCCCCCcHHHHHhhhccCCCCHHHHHHHHHHhcccccCCccCcccccCCCCceeEEEEccC--hHHH
Q 007568 250 WQDICIDVREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVACKKLESLDWFGLVPKLWPNAKYVYSIMTGS--MQHY 327 (598)
Q Consensus 250 w~el~~dI~~g~~~~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~~~~gi~~~lwP~l~~i~~~~~g~--~~~y 327 (598)
+++.++.|.+-.+. .|.++++....+|+++++. ++ ++ +++.| +.+|. ....
T Consensus 176 ~~~~l~~L~~~~P~-----------~L~g~pS~l~~LA~~~~~~----------~l--~~--~~k~i--i~~~E~l~~~~ 228 (430)
T TIGR02304 176 FQAHIKRLNQRKPS-----------IIVAPPSVLRALALEVMEG----------EL--TI--KPKKV--ISVAEVLEPQD 228 (430)
T ss_pred HHHHHHHHHHhCCC-----------EEEEcHHHHHHHHHHHHhc----------CC--CC--CceEE--EEccCCCCHHH
Confidence 78888888877766 4666665555666655331 23 22 35532 23332 6677
Q ss_pred HHHHHHHhCCCCeecCcccCCCcceeecCCCCCCCCCcceeeecCceEEEE--EecCCcccCCCCCCCCCCCCccccCCC
Q 007568 328 LKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEF--IPIHRRKQDCNSAIDDFIEDEPVPLSQ 405 (598)
Q Consensus 328 ~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~~~~~~EF--ip~~~~~~~~~~~~~~~~~~~~l~~~e 405 (598)
++.+++.|| ++++ +.||+|||+++. +|+. .+||+..+..++|+ ++++
T Consensus 229 r~~Ie~~fg-~~V~-~~YG~tEg~la~----eC~~--g~lHl~ed~~~vE~~ivD~~----------------------- 277 (430)
T TIGR02304 229 RELIRNVFK-NTVH-QIYQATEGFLAS----TCRC--GTLHLNEDLVHIEKQYLDEH----------------------- 277 (430)
T ss_pred HHHHHHHhC-CCee-EccCCchhheEE----ecCC--CCEEEccccEEEEeeEECCC-----------------------
Confidence 788999995 8999 899999987663 4543 46999999999994 4422
Q ss_pred CCCCCeEEEEEcccC----ceeccccCCEEEEccccCCC----CEE-EEEeecCceEee---ceee--cCHHHHHHHHHH
Q 007568 406 VKLGQEYEIVLTSFT----GLYRYRLGDVVEVAGFHKGT----PKL-NFVCRRKLILTV---NIDK--NTEKDLQLVVDR 471 (598)
Q Consensus 406 ve~G~~yeLVvTt~~----Gl~RYr~GDvv~v~g~~~~~----P~i-~f~gR~~~~l~~---~Gek--v~e~~v~~av~~ 471 (598)
| .++.|||++. +|+||+|||++++.+..|.| |+| ++.||.+|++.+ .|.. |++..+..+|..
T Consensus 278 ---~-~~~~ViT~L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~ 353 (430)
T TIGR02304 278 ---K-RFVPIITDFTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILF 353 (430)
T ss_pred ---C-ceEEEEecCCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHh
Confidence 1 2345999974 59999999999988777654 466 589999999976 3544 488888887665
Q ss_pred HHhhhhccCCeeeeeEEeeccCCCCceEEEEEEe
Q 007568 472 GSQLLNKTGAELVDFTSHADIVNQPGHYIIYWEI 505 (598)
Q Consensus 472 ~~~~l~~~g~~l~~f~~~~~~~~~~~~Y~~~vE~ 505 (598)
..+ + +.+|.++.. .+.+..+.+..
T Consensus 354 ~~~-----~--i~~yQi~Q~---~~~~l~v~~~~ 377 (430)
T TIGR02304 354 TLP-----L--IVEYRVLQT---GSAQLELIADC 377 (430)
T ss_pred cCC-----C--CceEEEEEc---cCCeEEEEEEe
Confidence 433 2 458887754 35677766654
No 9
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.50 E-value=7.3e-14 Score=145.38 Aligned_cols=131 Identities=20% Similarity=0.257 Sum_probs=95.9
Q ss_pred CCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCCCC----CcceeeecCceEEEEEecCCcc
Q 007568 312 NAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPE----DVTFAVIPTFSYFEFIPIHRRK 385 (598)
Q Consensus 312 ~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~----~~~~~l~~~~~~~EFip~~~~~ 385 (598)
.|+++. +.|+ .+...+++...+ |+.+. ..+|+.||.+.+.--. +|++ .+|..+.|+. |..-++
T Consensus 306 SLrllQ--VGGarl~~~~Arrv~~~l-gC~LQ-QVFGMAEGLvnyTRLD-Dp~E~i~~TQGrPlsP~D---EvrvvD--- 374 (542)
T COG1021 306 SLRLLQ--VGGARLSATLARRVPAVL-GCQLQ-QVFGMAEGLVNYTRLD-DPPEIIIHTQGRPLSPDD---EVRVVD--- 374 (542)
T ss_pred heeEEe--ecCcccCHHHHhhchhhh-CchHH-HHhhhhhhhhcccccC-CchHheeecCCCcCCCcc---eeEEec---
Confidence 577654 4444 566777888888 58999 9999999987664211 2221 1222233332 211222
Q ss_pred cCCCCCCCCCCCCccccCCCCCCCCeEEEEE---cccCceec--------------cccCCEEEEccccCCCCEEEEEee
Q 007568 386 QDCNSAIDDFIEDEPVPLSQVKLGQEYEIVL---TSFTGLYR--------------YRLGDVVEVAGFHKGTPKLNFVCR 448 (598)
Q Consensus 386 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVv---Tt~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~gR 448 (598)
+++++ |.+|++++|.. -|+.|+|| ||+||+|+.+. ...+.+.||
T Consensus 375 ----------~dg~p-----v~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~----dGyl~V~GR 435 (542)
T COG1021 375 ----------ADGNP-----VAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDP----DGYLVVEGR 435 (542)
T ss_pred ----------CCCCC-----CCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecC----CceEEEEee
Confidence 22333 66999999998 67899998 99999999995 889999999
Q ss_pred cCceEeeceeecCHHHHHHHHHHH
Q 007568 449 RKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 449 ~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.||.||.+||||..+|||+.+.+-
T Consensus 436 ~KDQINRgGEKIAAeEvEn~LL~H 459 (542)
T COG1021 436 VKDQINRGGEKIAAEEVENLLLRH 459 (542)
T ss_pred ehhhhccccchhhHHHHHHHHhhC
Confidence 999999999999999999998864
No 10
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.48 E-value=2.2e-11 Score=139.55 Aligned_cols=229 Identities=13% Similarity=0.112 Sum_probs=129.1
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCC--CCeecCcccCCCcceee-cCCC---CCCCCCcceeeecCceEEEEEe
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGD--LPLVSADYGSTESWIGV-NVDP---SLPPEDVTFAVIPTFSYFEFIP 380 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~--~~i~~~~ygaSE~~i~~-~~~~---~~~~~~~~~~l~~~~~~~EFip 380 (598)
.++|++ +.+|| .....+.+.+.+++ ++++ +.||+||+...+ ...+ .+.++..+. ..++ .-++.++
T Consensus 366 ~~~lr~---i~~~Ge~l~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~vG~-p~~g-~~~~i~d 439 (637)
T PRK00174 366 LSSLRL---LGSVGEPINPEAWEWYYKVVGGERCPIV-DTWWQTETGGIMITPLPGATPLKPGSATR-PLPG-IQPAVVD 439 (637)
T ss_pred ccceeE---EEEeCCCCCHHHHHHHHHHhCCCCCceE-ecccccccCCceEecCCCCCCcCCCcccC-CCCC-ceEEEEC
Confidence 457884 34444 44455566666653 8899 999999974322 1111 111111222 2222 3334443
Q ss_pred cCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc-----Ccee----------------ccccCCEEEEccccCC
Q 007568 381 IHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF-----TGLY----------------RYRLGDVVEVAGFHKG 439 (598)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~-----~Gl~----------------RYr~GDvv~v~g~~~~ 439 (598)
. +++. +..|+.|||+|+.. .|+| .|+|||+++++.
T Consensus 440 ~---------------~g~~-----~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~---- 495 (637)
T PRK00174 440 E---------------EGNP-----LEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDE---- 495 (637)
T ss_pred C---------------CCCC-----CCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcC----
Confidence 2 2333 45799999999751 2332 299999999984
Q ss_pred CCEEEEEeecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeeccCCCCc-eEEEEEEecCCCc--cchHHH
Q 007568 440 TPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHADIVNQPG-HYIIYWEIKGDVE--EGVLNQ 516 (598)
Q Consensus 440 ~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~-~Y~~~vE~~~~~~--~~~l~~ 516 (598)
...+.|+||.+|+++++|++|++.+||++|.+.. + +.+..++.......+ .-+.|+....+.. ....++
T Consensus 496 dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~------~--V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~ 567 (637)
T PRK00174 496 DGYYWITGRVDDVLNVSGHRLGTAEIESALVAHP------K--VAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKE 567 (637)
T ss_pred CCcEEEEEecccEEEeCCEEECHHHHHHHHHhCC------C--cceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHH
Confidence 6789999999999999999999999999998531 2 234444321111112 2335666543321 122333
Q ss_pred HHHHHHhhcCCchhHhhhhcCCcCCeEEEEe------ccchHHHHHHHHhcCCCCCCCCCCCcccCCHHHHHHHhhcc
Q 007568 517 CCHEMDVSFVDPGYVVSRRTNSIGPLELCIV------KRGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILNDWT 588 (598)
Q Consensus 517 ~~~~ld~~l~n~~Y~~~R~~g~l~p~~v~~v------~~g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~~ 588 (598)
+.+.+.+.| +.| ..|-.+.+| ..|-..+-.=..+.+|.. +.+.+.-+.|++.++.+.+..
T Consensus 568 l~~~l~~~l--~~~--------~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 633 (637)
T PRK00174 568 LRNWVRKEI--GPI--------AKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE--ILGDTSTLADPSVVEKLIEAR 633 (637)
T ss_pred HHHHHHhhc--CCc--------cCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC--CCCCcccccCHHHHHHHHHHH
Confidence 444444443 112 234455554 234333321112234432 566777889999999888644
No 11
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.47 E-value=3.4e-12 Score=143.53 Aligned_cols=134 Identities=16% Similarity=0.229 Sum_probs=90.4
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCC-C--CCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSL-P--PEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~-~--~~~~~~~l~~~~~~~EFip~~~ 383 (598)
.++|+ .+.+|| .....+++++.+++++++ +.||+||+...+...+.. + +...+. ..++.. +..++.+
T Consensus 298 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~g~~-v~i~d~~- 370 (539)
T PRK06334 298 LPSLR---FVVIGGDAFKDSLYQEALKTFPHIQLR-QGYGTTECSPVITINTVNSPKHESCVGM-PIRGMD-VLIVSEE- 370 (539)
T ss_pred ccccc---EEEECCccCCHHHHHHHHHHCCCCeEE-ecccccccCceEEeccCCCCCCCCcCce-ecCCCE-EEEEcCC-
Confidence 46788 445555 456667788888788999 999999975332221111 1 111222 222221 1222211
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee---------------ccccCCEEEEccccCCCCEEEE
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY---------------RYRLGDVVEVAGFHKGTPKLNF 445 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~---------------RYr~GDvv~v~g~~~~~P~i~f 445 (598)
++. ++.+|+.|||+|.. ..|+| .|+|||+++++. ...+.|
T Consensus 371 -------------~~~-----~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~----~G~l~~ 428 (539)
T PRK06334 371 -------------TKV-----PVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDR----HGELFL 428 (539)
T ss_pred -------------CCc-----cCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECC----CCeEEE
Confidence 122 25689999999954 34554 399999999985 778999
Q ss_pred EeecCceEeeceeecCHHHHHHHHHHH
Q 007568 446 VCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 446 ~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+||.+++++++|++|++.|||++|.+.
T Consensus 429 ~GR~~d~ik~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 429 KGRLSRFVKIGAEMVSLEALESILMEG 455 (539)
T ss_pred EeccCCeEEECCEEECHHHHHHHHHHc
Confidence 999999999999999999999999864
No 12
>PRK09274 peptide synthase; Provisional
Probab=99.46 E-value=1.7e-11 Score=137.70 Aligned_cols=142 Identities=15% Similarity=0.132 Sum_probs=90.7
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhC-CCCeecCcccCCCcceeecCCCCC------------CCCCcceeeecCc
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAG-DLPLVSADYGSTESWIGVNVDPSL------------PPEDVTFAVIPTF 373 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g-~~~i~~~~ygaSE~~i~~~~~~~~------------~~~~~~~~l~~~~ 373 (598)
.|+++. +.+|| ....++++++.++ +++++ +.||+||+.......... +....+. ..|+
T Consensus 287 ~~~lr~---~~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-~~~~- 360 (552)
T PRK09274 287 LPSLRR---VISAGAPVPIAVIERFRAMLPPDAEIL-TPYGATEALPISSIESREILFATRAATDNGAGICVGR-PVDG- 360 (552)
T ss_pred CchhhE---EEecCCcCCHHHHHHHHHHcCCCceEE-ccccccccceeEeecchhhhccccccccCCCCcccCc-cCCC-
Confidence 467884 44454 5667778888886 48999 999999975322111100 0000111 2222
Q ss_pred eEEEEEecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCce------------------eccccCCEEE
Q 007568 374 SYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGL------------------YRYRLGDVVE 432 (598)
Q Consensus 374 ~~~EFip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl------------------~RYr~GDvv~ 432 (598)
.-+..++.++.. .+..-...++..|+.|||+|.+ ..|+ .+|+|||+++
T Consensus 361 ~~~~ivd~~~~~-----------~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~ 429 (552)
T PRK09274 361 VEVRIIAISDAP-----------IPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGY 429 (552)
T ss_pred ceEEEEeccccc-----------cccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEE
Confidence 233444432110 0000012346689999999943 2232 3799999999
Q ss_pred EccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 433 VAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 433 v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
++. ...+.|+||.+|+++++|++|++.+||++|.+.
T Consensus 430 ~d~----dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (552)
T PRK09274 430 LDA----QGRLWFCGRKAHRVETAGGTLYTIPCERIFNTH 465 (552)
T ss_pred Ecc----CCcEEEEeccCCeEEECCEEECcHHHHHHHHhC
Confidence 985 678999999999999999999999999999864
No 13
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.46 E-value=3.8e-11 Score=137.20 Aligned_cols=228 Identities=12% Similarity=0.071 Sum_probs=127.3
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhC--CCCeecCcccCCCccee-ecCCCC---CCCCCcceeeecCceEEEEEe
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAG--DLPLVSADYGSTESWIG-VNVDPS---LPPEDVTFAVIPTFSYFEFIP 380 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g--~~~i~~~~ygaSE~~i~-~~~~~~---~~~~~~~~~l~~~~~~~EFip 380 (598)
.++|++ +.+|| .....+.+.+.++ +++++ +.||+||+... +...+. ..++..+. ..+ +.-++.++
T Consensus 357 l~~lr~---i~~~G~~l~~~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~~~~~G~-p~~-g~~~~i~d 430 (625)
T TIGR02188 357 LSSLRL---LGSVGEPINPEAWMWYYKVVGKERCPIV-DTWWQTETGGIMITPLPGATPTKPGSATL-PFF-GIEPAVVD 430 (625)
T ss_pred ccceeE---EEEecCCCCHHHHHHHHHHcCCCCCceE-ecccccccCCceeecCCCCCCcCCCcccC-CcC-CceEEEEC
Confidence 356774 44444 3444556666665 38899 99999997432 211111 11211222 222 23334443
Q ss_pred cCCcccCCCCCCCCCCCCccccCCCCC-CCCeEEEEEccc-----Cceec----------------cccCCEEEEccccC
Q 007568 381 IHRRKQDCNSAIDDFIEDEPVPLSQVK-LGQEYEIVLTSF-----TGLYR----------------YRLGDVVEVAGFHK 438 (598)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~eve-~G~~yeLVvTt~-----~Gl~R----------------Yr~GDvv~v~g~~~ 438 (598)
. ++.. ++ +|+.|||+|+.. .|+|. |+|||+++++.
T Consensus 431 ~---------------~g~~-----~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~--- 487 (625)
T TIGR02188 431 E---------------EGNP-----VEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDK--- 487 (625)
T ss_pred C---------------CCCC-----CCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcC---
Confidence 1 1222 45 799999999762 34441 89999999985
Q ss_pred CCCEEEEEeecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeec-cCCCCceEEEEEEecCCC--ccchHH
Q 007568 439 GTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHAD-IVNQPGHYIIYWEIKGDV--EEGVLN 515 (598)
Q Consensus 439 ~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~-~~~~~~~Y~~~vE~~~~~--~~~~l~ 515 (598)
...+.|+||.+|++++.|++|++.+||++|.+.. + +.+..++.. .......-+.|+.+..+. +....+
T Consensus 488 -dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p------~--V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~ 558 (625)
T TIGR02188 488 -DGYIWITGRVDDVINVSGHRLGTAEIESALVSHP------A--VAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRK 558 (625)
T ss_pred -CCcEEEEecccCEEEeCCEEECHHHHHHHHHhCC------C--cceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHH
Confidence 6789999999999999999999999999998642 2 334444321 111112333566664432 212223
Q ss_pred HHHHHHHhhcCCchhHhhhhcCCcCCeEEEEec------cchHHHHHHHHhcCCCCCCCCCCCcccCCHHHHHHHhh
Q 007568 516 QCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVK------RGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILND 586 (598)
Q Consensus 516 ~~~~~ld~~l~n~~Y~~~R~~g~l~p~~v~~v~------~g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 586 (598)
++.+.+.+.| +. ...|-.|.+|+ .|-..+-.=..+..|.. .+++.+--+.|++.++.++.
T Consensus 559 ~l~~~~~~~l--~~--------~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~-~~~~~~~~~~~p~~~~~~~~ 624 (625)
T TIGR02188 559 ELRKHVRKEI--GP--------IAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEE-EILGDTSTLEDPSVVEELIE 624 (625)
T ss_pred HHHHHHHhhc--CC--------CccCcEEEECCCCCCCCCccchHHHHHHHHcCCC-CCCCCcccccCHHHHHHHHh
Confidence 3334444443 11 12333444432 33333222122234431 24667778889999998864
No 14
>PRK07529 AMP-binding domain protein; Validated
Probab=99.45 E-value=2.4e-11 Score=139.42 Aligned_cols=137 Identities=13% Similarity=0.189 Sum_probs=92.5
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCC---CCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSL---PPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~---~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
+++|+ .+.+|| ....++++++.+ +++++ +.||+||+.......+.. ..+..+.. .|+ .-+.++..++
T Consensus 332 ~~slr---~v~~gg~~l~~~l~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~~-~p~-~~v~i~~~d~ 404 (632)
T PRK07529 332 ISSLR---YALCGAAPLPVEVFRRFEAAT-GVRIV-EGYGLTEATCVSSVNPPDGERRIGSVGLR-LPY-QRVRVVILDD 404 (632)
T ss_pred ccceE---EEEEcCCCCCHHHHHHHHHHh-CCcEe-eeecccccCcccccCCccccccCCCcccc-cCC-ceEEEEEcCC
Confidence 46777 444554 556667787777 58999 999999985543322211 11112322 222 2344544342
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee-------------ccccCCEEEEccccCCCCEEEEEe
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY-------------RYRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~g 447 (598)
. +. ...++.+|+.|||+|++ +.|++ .|+|||+++++. ...+.|+|
T Consensus 405 ~-------------g~--~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~l~i~G 465 (632)
T PRK07529 405 A-------------GR--YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDA----DGYFWLTG 465 (632)
T ss_pred C-------------Cc--ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcC----CceEEEEe
Confidence 1 21 01235689999999965 35543 389999999985 77899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|.+|+++++|++|++.+||++|.+.
T Consensus 466 R~~d~i~~~G~~i~p~eIE~~l~~~ 490 (632)
T PRK07529 466 RAKDLIIRGGHNIDPAAIEEALLRH 490 (632)
T ss_pred cccCEEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999863
No 15
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.42 E-value=2.5e-11 Score=139.74 Aligned_cols=132 Identities=15% Similarity=0.141 Sum_probs=88.2
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC---CCCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS---LPPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
.++|++ +.+|| .....+.+++.+| +++. +.||+||+...+..... .+.+..+. ..| +.-.+.++.
T Consensus 379 l~~Lr~---i~~~G~~l~~~~~~~~~~~~g-~~i~-~~yG~TE~~~~~~~~~~~~~~~~~s~G~-p~~-g~~~~i~d~-- 449 (647)
T PTZ00237 379 LSNLKE---IWCGGEVIEESIPEYIENKLK-IKSS-RGYGQTEIGITYLYCYGHINIPYNATGV-PSI-FIKPSILSE-- 449 (647)
T ss_pred cchheE---EEecCccCCHHHHHHHHHhcC-CCEE-eeechHHhChhhhccCCCCCCCCCCCcc-CcC-CceEEEECC--
Confidence 357884 44444 4455566777774 8999 99999997533211111 11111222 112 222344431
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc------cCceec---------------cccCCEEEEccccCCCCE
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS------FTGLYR---------------YRLGDVVEVAGFHKGTPK 442 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt------~~Gl~R---------------Yr~GDvv~v~g~~~~~P~ 442 (598)
+++ ++.+|+.|||+++. ..|+|. |+|||+++++. ...
T Consensus 450 -------------~g~-----~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~----dG~ 507 (647)
T PTZ00237 450 -------------DGK-----ELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDE----NGY 507 (647)
T ss_pred -------------CCC-----CCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECC----CCe
Confidence 133 24579999999963 356662 89999999985 788
Q ss_pred EEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 443 LNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 443 i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+.|+||.||+|++.|++|++.+||++|.+.
T Consensus 508 l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~ 537 (647)
T PTZ00237 508 YTIVSRSDDQIKISGNKVQLNTIETSILKH 537 (647)
T ss_pred EEEEeccCCEEEECCEEeCHHHHHHHHHhC
Confidence 999999999999999999999999999864
No 16
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.41 E-value=6.6e-11 Score=137.36 Aligned_cols=133 Identities=12% Similarity=0.191 Sum_probs=91.3
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC--CCCCCcceeeecCceEEEEEecCCc
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS--LPPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~--~~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
+++|+ ++++|| ....++++.+.+++++++ +.||+||+......... ..+...+. ..++ .-++.++.+
T Consensus 259 ~~slr---~i~~gGe~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~iG~-p~~~-~~v~i~d~~-- 330 (705)
T PRK06060 259 FRSLR---CVVSAGEALELGLAERLMEFFGGIPIL-DGIGSTEVGQTFVSNRVDEWRLGTLGR-VLPP-YEIRVVAPD-- 330 (705)
T ss_pred cccee---EEEEecCcCCHHHHHHHHHHcCCCceE-eeeeccccCceEEeccCCCCCcCcccc-cCCC-cEEEEECCC--
Confidence 45778 445554 556667788888889999 99999997532221111 11111122 2233 233444322
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec-----------cccCCEEEEccccCCCCEEEEEeecC
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR-----------YRLGDVVEVAGFHKGTPKLNFVCRRK 450 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R-----------Yr~GDvv~v~g~~~~~P~i~f~gR~~ 450 (598)
+++ +.+|+.|||+|+. ..|||. |+|||++++.. ...+.|+||.+
T Consensus 331 -------------g~~-----~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~----dG~l~~~GR~d 388 (705)
T PRK06060 331 -------------GTT-----AGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDS----DGWVTYRCRAD 388 (705)
T ss_pred -------------CCC-----CCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECC----CceEEEecccC
Confidence 232 4579999999965 346653 99999999875 67899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 007568 451 LILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 451 ~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|+++++|++|...+||.+|.+.
T Consensus 389 d~ik~~G~~v~~~eIE~~l~~~ 410 (705)
T PRK06060 389 DTEVIGGVNVDPREVERLIIED 410 (705)
T ss_pred ceEEECCEEECHHHHHHHHHhC
Confidence 9999999999999999999864
No 17
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.41 E-value=9e-11 Score=132.39 Aligned_cols=136 Identities=16% Similarity=0.173 Sum_probs=91.3
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcce-eec-CCCCCCCCCcceeeecCceEEEEEecCCc
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWI-GVN-VDPSLPPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i-~~~-~~~~~~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
++.++. +..|+ ....++++.+.+++++++ +.||+||+.. ... .................+.-.+.++++
T Consensus 318 ~~~lr~---~~~gg~~l~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~-- 391 (560)
T PLN02574 318 LKSLKQ---VSCGAAPLSGKFIQDFVQTLPHVDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWS-- 391 (560)
T ss_pred cccceE---EEEecccCCHHHHHHHHHHCCCCcEE-ecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCC--
Confidence 456774 44444 455667777778788999 9999999753 221 111110000112222233445555533
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee--------------ccccCCEEEEccccCCCCEEEEEe
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY--------------RYRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~g 447 (598)
++.. +.+|+.|||+|++ ..|+| .|+|||+++++. ...+.|+|
T Consensus 392 ------------~g~~-----~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~G 450 (560)
T PLN02574 392 ------------TGCL-----LPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDE----DGYLYIVD 450 (560)
T ss_pred ------------CCcC-----CCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEEC----CCeEEEEe
Confidence 1232 4579999999965 34555 299999999985 67899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|.+|++++.|++|+..+||.+|.+.
T Consensus 451 R~~d~i~~~G~~v~~~eiE~~l~~~ 475 (560)
T PLN02574 451 RLKEIIKYKGFQIAPADLEAVLISH 475 (560)
T ss_pred cchhheEECCEEECHHHHHHHHHhC
Confidence 9999999999999999999999853
No 18
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.40 E-value=5.7e-11 Score=133.40 Aligned_cols=133 Identities=11% Similarity=0.146 Sum_probs=90.0
Q ss_pred cCCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCC----CCCcceeeecCceEEEEEec
Q 007568 309 LWPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLP----PEDVTFAVIPTFSYFEFIPI 381 (598)
Q Consensus 309 lwP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~----~~~~~~~l~~~~~~~EFip~ 381 (598)
-.|++++ +.+|| ....++++++.+ +++++ +.||+||+.......+..+ ....+. ..++ .-++.++.
T Consensus 310 ~~~~l~~---~~~~G~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~v~i~d~ 382 (547)
T PRK13295 310 PVSSLRT---FLCAGAPIPGALVERARAAL-GAKIV-SAWGMTENGAVTLTKLDDPDERASTTDGC-PLPG-VEVRVVDA 382 (547)
T ss_pred CcccceE---EEEecCCCCHHHHHHHHHHh-CCCeE-EeccCCCCCCeeeccCCCcchhccCcccc-ccCC-cEEEEECC
Confidence 3567884 44444 566677777777 68999 9999999743222111110 001112 1122 23444432
Q ss_pred CCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Cceec------------cccCCEEEEccccCCCCEEEEE
Q 007568 382 HRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLYR------------YRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~R------------Yr~GDvv~v~g~~~~~P~i~f~ 446 (598)
+ +. ++..|+.+||+|++. .|+|. |+|||+++++. .+.+.|+
T Consensus 383 ~---------------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~~----~g~l~~~ 438 (547)
T PRK13295 383 D---------------GA-----PLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARIDA----DGYIRIS 438 (547)
T ss_pred C---------------CC-----CCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEcC----CceEEEE
Confidence 1 22 245799999999663 56652 99999999985 6789999
Q ss_pred eecCceEeeceeecCHHHHHHHHHHH
Q 007568 447 CRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 447 gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
||.+++++++|++|++.+|+.+|.+.
T Consensus 439 gR~~~~i~~~G~~v~p~~IE~~l~~~ 464 (547)
T PRK13295 439 GRSKDVIIRGGENIPVVEIEALLYRH 464 (547)
T ss_pred eccCCeEEECCEEECHHHHHHHHHhC
Confidence 99999999999999999999999854
No 19
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.39 E-value=6.9e-11 Score=130.73 Aligned_cols=135 Identities=16% Similarity=0.214 Sum_probs=90.9
Q ss_pred ccCCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCC--CCCCCCCcceeeecCceEEEEEecC
Q 007568 308 KLWPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVD--PSLPPEDVTFAVIPTFSYFEFIPIH 382 (598)
Q Consensus 308 ~lwP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~--~~~~~~~~~~~l~~~~~~~EFip~~ 382 (598)
...++++ .+..|| .....+.+++.+ +++++ +.||+||+.+..... ..+.+...+. ..+ +..+..++++
T Consensus 266 ~~~~~lr---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~-~~~v~i~d~~ 338 (504)
T PRK07514 266 EAAAHMR---LFISGSAPLLAETHREFQERT-GHAIL-ERYGMTETNMNTSNPYDGERRAGTVGF-PLP-GVSLRVTDPE 338 (504)
T ss_pred cccccee---eEEecCCCCCHHHHHHHHHHh-CCcce-eecccccccccccCCccccccCccccc-CCC-CcEEEEEECC
Confidence 3456788 444454 444556677767 47888 999999975432211 1111111111 222 3444555522
Q ss_pred CcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec--------------cccCCEEEEccccCCCCEEEE
Q 007568 383 RRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR--------------YRLGDVVEVAGFHKGTPKLNF 445 (598)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f 445 (598)
++.+ +..|+.+||+|++ ..|+|+ |+|||+++.+. ...+.|
T Consensus 339 --------------~~~~-----~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~ 395 (504)
T PRK07514 339 --------------TGAE-----LPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE----RGYVHI 395 (504)
T ss_pred --------------CCCC-----CCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC----CccEEE
Confidence 1233 4578999999976 456664 99999999985 668999
Q ss_pred EeecCceEeeceeecCHHHHHHHHHHH
Q 007568 446 VCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 446 ~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.||.+++++++|++|++.+|++++.+.
T Consensus 396 ~GR~~~~i~~~G~~i~~~~IE~~l~~~ 422 (504)
T PRK07514 396 VGRGKDLIISGGYNVYPKEVEGEIDEL 422 (504)
T ss_pred eccccceEEeCCeEECHHHHHHHHHhC
Confidence 999999999999999999999999754
No 20
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.39 E-value=9.3e-11 Score=132.49 Aligned_cols=132 Identities=11% Similarity=0.116 Sum_probs=89.1
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcce-eecCCC--CCCCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWI-GVNVDP--SLPPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i-~~~~~~--~~~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
+++|++ +.+|| .......+++.+ +++++ +.||+||+.. .+...+ ...++..+. ..|+ ..++.++.+
T Consensus 322 ~~~lr~---~~~gG~~l~~~~~~~~~~~~-g~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~g-~~~~i~d~~- 393 (570)
T PRK04319 322 LSSLRH---ILSVGEPLNPEVVRWGMKVF-GLPIH-DNWWMTETGGIMIANYPAMDIKPGSMGK-PLPG-IEAAIVDDQ- 393 (570)
T ss_pred cccceE---EEEcccCCCHHHHHHHHHHh-CCCeE-eceeecccCCEEEecCCCCCCCCCcCcC-CCCC-CEEEEECCC-
Confidence 567884 44444 445556677767 48898 9999999743 221111 111222232 2222 344555422
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc-----cCcee-------------ccccCCEEEEccccCCCCEEEE
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS-----FTGLY-------------RYRLGDVVEVAGFHKGTPKLNF 445 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt-----~~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f 445 (598)
+. ++.+|+.|||+|+. +.|+| .|+|||+++++. ...+.|
T Consensus 394 --------------~~-----~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~----~g~l~~ 450 (570)
T PRK04319 394 --------------GN-----ELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDE----DGYFWF 450 (570)
T ss_pred --------------CC-----CCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECC----CeeEEE
Confidence 22 24689999999964 23565 389999999985 678999
Q ss_pred EeecCceEeeceeecCHHHHHHHHHHH
Q 007568 446 VCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 446 ~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+||.+|+++++|++|++.+||+++.+.
T Consensus 451 ~GR~~d~i~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 451 QGRVDDVIKTSGERVGPFEVESKLMEH 477 (570)
T ss_pred EecCCCEEEECCEEECHHHHHHHHhhC
Confidence 999999999999999999999999864
No 21
>PLN02654 acetate-CoA ligase
Probab=99.38 E-value=2.8e-10 Score=131.46 Aligned_cols=226 Identities=12% Similarity=0.067 Sum_probs=126.3
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCC--CCeecCcccCCCcce-eecCCCCC---CCCCcceeeecCceEEEEEec
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGD--LPLVSADYGSTESWI-GVNVDPSL---PPEDVTFAVIPTFSYFEFIPI 381 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~--~~i~~~~ygaSE~~i-~~~~~~~~---~~~~~~~~l~~~~~~~EFip~ 381 (598)
++|++ +.+|| .....+.+.+.+|+ +++. +.||+||+.. .+...+.. .++..+. ..|+.. ...++.
T Consensus 397 ~~Lr~---i~~~Ge~l~~~~~~~~~~~~g~~~~~i~-~~yg~TE~g~~~~~~~~~~~~~~~gs~G~-p~~g~~-v~i~d~ 470 (666)
T PLN02654 397 KSLRV---LGSVGEPINPSAWRWFFNVVGDSRCPIS-DTWWQTETGGFMITPLPGAWPQKPGSATF-PFFGVQ-PVIVDE 470 (666)
T ss_pred hheeE---EEEecCCCCHHHHHHHHHHhCCCCCcee-ccccccccCCeeeccCCCCCCCCCCccCC-CCCCce-EEEECC
Confidence 56774 34444 34444556666754 7888 9999999642 22111111 1111222 222221 222221
Q ss_pred CCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc-----cCceec----------------cccCCEEEEccccCCC
Q 007568 382 HRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS-----FTGLYR----------------YRLGDVVEVAGFHKGT 440 (598)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt-----~~Gl~R----------------Yr~GDvv~v~g~~~~~ 440 (598)
+++. +..|+.|||+|.. ..|+|. |+|||+++++. .
T Consensus 471 ---------------~g~~-----~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~----d 526 (666)
T PLN02654 471 ---------------KGKE-----IEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDK----D 526 (666)
T ss_pred ---------------CCCC-----CCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECC----C
Confidence 1332 4467789999965 234442 89999999985 6
Q ss_pred CEEEEEeecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEe--eccCCCCceEEEEEEecCCC--ccchHHH
Q 007568 441 PKLNFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSH--ADIVNQPGHYIIYWEIKGDV--EEGVLNQ 516 (598)
Q Consensus 441 P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~--~~~~~~~~~Y~~~vE~~~~~--~~~~l~~ 516 (598)
..+.|+||.+|+|++.|++|++.|||++|.+... +.+-.|+ ++.. ....-..||.+..+. +.+..++
T Consensus 527 G~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~--------V~eaaVvg~~d~~-~ge~~~a~Vvl~~~~~~~~~l~~~ 597 (666)
T PLN02654 527 GYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQ--------CAEAAVVGIEHEV-KGQGIYAFVTLVEGVPYSEELRKS 597 (666)
T ss_pred CcEEEeeeccCeEEeCCEEECHHHHHHHHHhCCC--------eeeEEEEeeEcCC-CCeEEEEEEEECCCCCCCHHHHHH
Confidence 7899999999999999999999999999986422 2344333 2211 111234566554331 2222223
Q ss_pred HHHHHHhhcCCchhHhhhhcCCcCCeEEEEec------cchHHHHHHHHhcCCCCCCCCCCCcccCCHHHHHHHhh
Q 007568 517 CCHEMDVSFVDPGYVVSRRTNSIGPLELCIVK------RGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILND 586 (598)
Q Consensus 517 ~~~~ld~~l~n~~Y~~~R~~g~l~p~~v~~v~------~g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 586 (598)
+.+.+.+.| .....|-.|.+|+ .|-..+-.=..+..|. ..+.+.+--+.|++.++.+.+
T Consensus 598 l~~~~~~~L----------~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 662 (666)
T PLN02654 598 LILTVRNQI----------GAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ-LDELGDTSTLADPGVVDQLIA 662 (666)
T ss_pred HHHHHHHhC----------CCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC-CCCCCCcccccCHHHHHHHHH
Confidence 333444443 1123455666653 3332221111223443 236788888999999988764
No 22
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.38 E-value=4.6e-11 Score=134.18 Aligned_cols=132 Identities=16% Similarity=0.066 Sum_probs=88.9
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC---CCCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS---LPPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
.++|+. ++.|| ....++++++.++ .+++ +.||+||+.+.....+. ..++..+. ..++ .-++.++.+
T Consensus 322 ~~~lr~---i~~gG~~l~~~~~~~~~~~~~-~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~d~~- 393 (549)
T PRK07788 322 TSSLKI---IFVSGSALSPELATRALEAFG-PVLY-NLYGSTEVAFATIATPEDLAEAPGTVGR-PPKG-VTVKILDEN- 393 (549)
T ss_pred CCceeE---EEEeCCCCCHHHHHHHHHHhC-ccce-eccCcchhchhhccChhhhhhcCCCccc-CCCC-cEEEEECCC-
Confidence 467884 44444 5566677777774 6888 99999997432211111 11111222 2222 334444422
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee----------ccccCCEEEEccccCCCCEEEEEeecC
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY----------RYRLGDVVEVAGFHKGTPKLNFVCRRK 450 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~----------RYr~GDvv~v~g~~~~~P~i~f~gR~~ 450 (598)
++. +..|+.|||+|++. .|++ -|+|||+++++. ...+.|+||.+
T Consensus 394 --------------~~~-----~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~d 450 (549)
T PRK07788 394 --------------GNE-----VPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDE----DGLLFVDGRDD 450 (549)
T ss_pred --------------cCC-----CCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEcC----CCCEEEeccCc
Confidence 333 45799999999764 4554 279999999885 67899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 007568 451 LILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 451 ~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|+++++|++|++.+||+++.+.
T Consensus 451 d~i~~~G~~v~p~eIE~~l~~~ 472 (549)
T PRK07788 451 DMIVSGGENVFPAEVEDLLAGH 472 (549)
T ss_pred ceEEECCEEECHHHHHHHHHhC
Confidence 9999999999999999999854
No 23
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.37 E-value=2.2e-10 Score=129.26 Aligned_cols=132 Identities=18% Similarity=0.280 Sum_probs=90.0
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC--CCCCCcceeeecCceEEEEEecCCc
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS--LPPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~--~~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
.+.+++ ++.|| .....+++++.+ +++++ +.||+||+...+...+. ..++..+. ..+ +..++.++++
T Consensus 325 ~~~lr~---v~~gG~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~vG~-~~~-~~~v~i~d~~-- 395 (562)
T PRK05677 325 FSALKL---TLSGGMALQLATAERWKEVT-GCAIC-EGYGMTETSPVVSVNPSQAIQVGTIGI-PVP-STLCKVIDDD-- 395 (562)
T ss_pred hhhceE---EEEcCccCCHHHHHHHHHHc-CCCee-ccCCccccCcceeecCccCCCCCccCc-cCC-CCEEEEECCC--
Confidence 456774 45555 455556677767 58999 99999997533322221 11122232 222 3344555422
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee--------------ccccCCEEEEccccCCCCEEEEEe
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY--------------RYRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~g 447 (598)
+.. +..|+.|||+|++ ..|+| .|+|||+++++. ...+.|.|
T Consensus 396 -------------~~~-----~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~G 453 (562)
T PRK05677 396 -------------GNE-----LPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE----DGYMRIVD 453 (562)
T ss_pred -------------CCC-----CCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC----CCcEEEEe
Confidence 222 4579999999965 34555 299999999995 67899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|.+|++++.|++|++.+||++|.+.
T Consensus 454 R~~d~i~~~G~~i~p~eiE~~l~~~ 478 (562)
T PRK05677 454 RKKDMILVSGFNVYPNELEDVLAAL 478 (562)
T ss_pred cCcCeEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999754
No 24
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.37 E-value=1.9e-10 Score=128.89 Aligned_cols=134 Identities=14% Similarity=0.182 Sum_probs=88.5
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceee-cCCCC--CCCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGV-NVDPS--LPPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~-~~~~~--~~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
+++++ .++.|| .....+.+++.+ +++++ +.||+||+.... ..... ..++..++.+ +. .-++.+..++
T Consensus 311 ~~~l~---~i~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~-~~-~~~~v~~~d~ 383 (541)
T TIGR03205 311 LSSLA---TIGSGGAPLPVEVANFFERKT-GLKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGLML-PG-IELDVVSLDD 383 (541)
T ss_pred ccccc---eEEEccccCCHHHHHHHHHHh-CCCee-cccccccCCcccccCCCCCCCCCCCcceec-cC-ceeEEEecCC
Confidence 34677 445554 445556677767 48999 999999974322 11111 1112233322 22 2233333231
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee-------------ccccCCEEEEccccCCCCEEEEEe
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY-------------RYRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~g 447 (598)
+++ ++.+|+.|||+|++ ..|+| +|+|||++++.. ...+.|+|
T Consensus 384 -------------~~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~i~G 441 (541)
T TIGR03205 384 -------------PTK-----VLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDT----DGYFFLVD 441 (541)
T ss_pred -------------CCc-----cCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcC----CceEEEEc
Confidence 122 24579999999976 34555 589999999974 56899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|.++++++.|++|++.+||.++.+.
T Consensus 442 R~~~~i~~~G~~i~~~eIE~~l~~~ 466 (541)
T TIGR03205 442 RKKDMIISGGFNVYPQMIEQAIYEH 466 (541)
T ss_pred cccCeEEECCEEECHHHHHHHHHhC
Confidence 9999999999999999999999864
No 25
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.36 E-value=7.2e-10 Score=127.00 Aligned_cols=133 Identities=11% Similarity=0.099 Sum_probs=86.5
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceee-cCCCCC-----CCCCcceeeecCceEEEEEe
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGV-NVDPSL-----PPEDVTFAVIPTFSYFEFIP 380 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~-~~~~~~-----~~~~~~~~l~~~~~~~EFip 380 (598)
.++|++ +.+|| .....+.+++.+| .+++ +.||+||....+ ...+.. ..+..+. ..|+. -...++
T Consensus 353 l~~lr~---~~~gGe~l~~~~~~~~~~~~~-~~~~-~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~-p~~g~-~v~i~d 425 (628)
T TIGR02316 353 LSSLHW---LFLAGEPLDEPTAHWITDGLG-KPVI-DNYWQTETGWPVLAIMPGLDLKPVKLGSPGL-PMYGY-HLRVLD 425 (628)
T ss_pred ccceeE---EEEecCCCCHHHHHHHHHHhC-CCEE-ecccccccCceeecCCCCCCcCCCCCCCccc-CcCCc-eEEEEE
Confidence 467884 44444 3445556666674 7888 999999975322 111111 1111122 22222 223333
Q ss_pred cCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc------Ccee-----------------ccccCCEEEEcccc
Q 007568 381 IHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF------TGLY-----------------RYRLGDVVEVAGFH 437 (598)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~------~Gl~-----------------RYr~GDvv~v~g~~ 437 (598)
.+ ++++ +..|+.|||+|... .|+| .|+|||+++++.
T Consensus 426 ~~--------------~g~~-----~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~-- 484 (628)
T TIGR02316 426 EA--------------TGRP-----CGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDE-- 484 (628)
T ss_pred CC--------------CCCC-----CCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcC--
Confidence 21 2333 45789999999653 3333 389999999985
Q ss_pred CCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 438 KGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 438 ~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
...+.|+||.||+++++|++|++.+||++|.+.
T Consensus 485 --dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~ 517 (628)
T TIGR02316 485 --DGYTFILGRTDDVINVAGHRLGTREIEESVSSH 517 (628)
T ss_pred --CCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhC
Confidence 678999999999999999999999999999854
No 26
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.36 E-value=2.6e-10 Score=126.10 Aligned_cols=134 Identities=20% Similarity=0.312 Sum_probs=87.1
Q ss_pred cCCCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCC-C------CCCCCcceeeecCceEEEEE
Q 007568 309 LWPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDP-S------LPPEDVTFAVIPTFSYFEFI 379 (598)
Q Consensus 309 lwP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~-~------~~~~~~~~~l~~~~~~~EFi 379 (598)
-+|.++.+ +.+|. .....+++.+.+++++++ ..||+||+...+.... . ++....+. ..|+. -...+
T Consensus 256 ~~~~l~~~--~~~G~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~-~~~~~-~~~i~ 330 (502)
T TIGR01734 256 NYPHLTHF--LFCGEELPVKTAKALLERFPKATIY-NTYGPTEATVAVTSVKITQEILDQYPRLPIGF-AKPDM-NLFIM 330 (502)
T ss_pred cCCcccEE--EEcCCcCCHHHHHHHHHHCCCcEEE-eCccCCcceEEEEEEEccccccccCCcccccc-ccCCC-EEEEE
Confidence 35677743 33443 556667777778888999 9999999743332111 0 11000111 11121 11112
Q ss_pred ecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee-----------------ccccCCEEEEccccCC
Q 007568 380 PIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY-----------------RYRLGDVVEVAGFHKG 439 (598)
Q Consensus 380 p~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-----------------RYr~GDvv~v~g~~~~ 439 (598)
+. ++.. +.+|+.+||+|.+ ..|+| -|+|||+++++.
T Consensus 331 ~~---------------~~~~-----~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~---- 386 (502)
T TIGR01734 331 DE---------------EGEP-----LPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITD---- 386 (502)
T ss_pred CC---------------CCCC-----CCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEEC----
Confidence 11 1222 4578999999965 24444 389999999985
Q ss_pred CCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 440 TPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 440 ~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
. .+.++||.+|+++++|++|++.+||.++.+.
T Consensus 387 ~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~ 418 (502)
T TIGR01734 387 G-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQS 418 (502)
T ss_pred C-EEEEeccccCeEEECcEEeCHHHHHHHHHcC
Confidence 4 9999999999999999999999999999864
No 27
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.36 E-value=1.4e-10 Score=130.39 Aligned_cols=131 Identities=19% Similarity=0.194 Sum_probs=89.2
Q ss_pred CCCceeEEEEccC-hHHHHHHHHHHhCCCCeecCcccCCCcceeecCC-CCCCCCCcceeeecCceEEEEEecCCcccCC
Q 007568 311 PNAKYVYSIMTGS-MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVD-PSLPPEDVTFAVIPTFSYFEFIPIHRRKQDC 388 (598)
Q Consensus 311 P~l~~i~~~~~g~-~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~-~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~ 388 (598)
+++++ +.+|+ ....++.+++.+ +++++ +.||+||+...+... +...++..+. . ..+.-+++++.+
T Consensus 294 ~~l~~---~~~g~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~vG~-~-~~~~~~~i~d~~------ 360 (542)
T PRK06155 294 HRVRV---ALGPGVPAALHAAFRERF-GVDLL-DGYGSTETNFVIAVTHGSQRPGSMGR-L-APGFEARVVDEH------ 360 (542)
T ss_pred CceEE---EEEcCCCHHHHHHHHHHc-CCCEE-eeecccccCccccCCCCCCCCCCcCc-c-CCCceEEEECCC------
Confidence 45663 33444 555666777777 58999 999999974332211 1111221222 2 233444555422
Q ss_pred CCCCCCCCCCccccCCCCCCCCeEEEEEccc------Ccee-------------ccccCCEEEEccccCCCCEEEEEeec
Q 007568 389 NSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF------TGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRR 449 (598)
Q Consensus 389 ~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~------~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~ 449 (598)
++ ++..|+.|||+|++. .|+| +|+|||+++++. ...+.|+||.
T Consensus 361 ---------~~-----~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~----dG~l~i~GR~ 422 (542)
T PRK06155 361 ---------DQ-----ELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDA----DGWFRFVDRI 422 (542)
T ss_pred ---------CC-----CCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcC----CceEEEEecC
Confidence 22 245789999999764 4444 699999999975 6789999999
Q ss_pred CceEeeceeecCHHHHHHHHHHH
Q 007568 450 KLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 450 ~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+|+++++|++|++.+|+++|.+.
T Consensus 423 ~d~i~~~G~~v~p~eIE~~l~~~ 445 (542)
T PRK06155 423 KDAIRRRGENISSFEVEQVLLSH 445 (542)
T ss_pred CCEEEeCCEEECHHHHHHHHHhC
Confidence 99999999999999999999864
No 28
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.35 E-value=3.5e-10 Score=126.58 Aligned_cols=111 Identities=18% Similarity=0.189 Sum_probs=76.8
Q ss_pred CCCeecCcccCCCcceeecCCCCCCC-----CCcceeeecCceEEEEEecCCcccCCCCCCCCCCCCccccCCCCCCCCe
Q 007568 337 DLPLVSADYGSTESWIGVNVDPSLPP-----EDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQE 411 (598)
Q Consensus 337 ~~~i~~~~ygaSE~~i~~~~~~~~~~-----~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~ 411 (598)
+++++ +.||+||+...+........ ...+..+. .+...++++++ ++.+ +..|+.
T Consensus 319 ~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~i~d~~--------------~~~~-----~~~g~~ 377 (540)
T PRK06164 319 GVPLT-GLYGSSEVQALVALQPATDPVSVRIEGGGRPAS-PEARVRARDPQ--------------DGAL-----LPDGES 377 (540)
T ss_pred CCcee-cceeeccccceeeccCCCCCCcceeccCccccC-CCeEEEEecCC--------------CCcC-----CCCCCe
Confidence 58899 99999997543322221100 01122211 23445555533 1233 468999
Q ss_pred EEEEEcc---cCcee--------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 412 YEIVLTS---FTGLY--------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 412 yeLVvTt---~~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|||+|++ ..|+| .|+|||+++++. ...+.|+||.++++++.|+++++.+|++++.+.
T Consensus 378 Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~ 451 (540)
T PRK06164 378 GEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRG----DGQFVYQTRMGDSLRLGGFLVNPAEIEHALEAL 451 (540)
T ss_pred eEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcC----CceEEEEeecCCeEEECCEEcCHHHHHHHHHhC
Confidence 9999977 34543 399999999985 678999999999999999999999999999754
No 29
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.35 E-value=2.1e-10 Score=128.49 Aligned_cols=133 Identities=19% Similarity=0.216 Sum_probs=88.1
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC-CC-CCCcceeeecCceEEEEEecCCc
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS-LP-PEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~-~~-~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
+++++ .+.+|| .....+++.+.+ +++++ +.||+||+.......+. .. ....+. ..++ .-+..++++
T Consensus 304 ~~~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~g-~~~~i~d~~-- 374 (546)
T PRK08314 304 LSSLR---YIGGGGAAMPEAVAERLKELT-GLDYV-EGYGLTETMAQTHSNPPDRPKLQCLGI-PTFG-VDARVIDPE-- 374 (546)
T ss_pred chhhh---eeeeccccCCHHHHHHHHHHc-CCcEE-ecccccccccceecCCCcCCCCCccCc-ccCC-eEEEEEeCC--
Confidence 56777 445555 445556677767 48898 99999997543322211 11 111111 1222 222333322
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee-----------------ccccCCEEEEccccCCCCEEE
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY-----------------RYRLGDVVEVAGFHKGTPKLN 444 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-----------------RYr~GDvv~v~g~~~~~P~i~ 444 (598)
++. .++.|+.+||+|.. ..|+| -|+|||+++++. ...+.
T Consensus 375 ------------~~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~----~g~l~ 433 (546)
T PRK08314 375 ------------TLE-----ELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDE----EGYFF 433 (546)
T ss_pred ------------CCc-----CCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcC----CCcEE
Confidence 122 34679999999955 34554 499999999985 67899
Q ss_pred EEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 445 FVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 445 f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
++||.+|+++++|++|++.+||++|.+.
T Consensus 434 ~~GR~~d~i~~~G~~v~~~eIE~~i~~~ 461 (546)
T PRK08314 434 ITDRLKRMINASGFKVWPAEVENLLYKH 461 (546)
T ss_pred EEecchhhEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999999864
No 30
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.34 E-value=3.2e-10 Score=126.20 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=40.9
Q ss_pred ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHH
Q 007568 424 RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDR 471 (598)
Q Consensus 424 RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~ 471 (598)
.|+|||+++++. ...+.|+||.||+++++|++|++.|||++|.+
T Consensus 358 ~~~TGDlg~~d~----dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 358 LRRHGDIMKRTP----GGYFCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred eeecCCeEEECC----CCcEEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 389999999985 67899999999999999999999999999985
No 31
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.33 E-value=2.2e-10 Score=129.29 Aligned_cols=134 Identities=19% Similarity=0.223 Sum_probs=90.3
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC---CCCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS---LPPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
+++++. +..|| ......++++.+ +++++ +.||+||+...+...+. ..++..+. ..++ ..++.++.+.
T Consensus 335 ~~~lr~---i~~gg~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~~ 407 (573)
T PRK05605 335 LSGVRN---AFSGAMALPVSTVELWEKLT-GGLLV-EGYGLTETSPIIVGNPMSDDRRPGYVGV-PFPD-TEVRIVDPED 407 (573)
T ss_pred chhccE---EEECCCcCCHHHHHHHHHHh-CCCee-cccccchhchhhhcCCcccCCcCCcccc-CCCC-CEEEEEcCCC
Confidence 457884 44444 455566666666 47888 99999997532222121 11111222 2233 3456665331
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee-------------ccccCCEEEEccccCCCCEEEEEe
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY-------------RYRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~g 447 (598)
. +.. +..|+.|||+|++. .|+| .|+|||+++.+. ...+.|+|
T Consensus 408 ~-------------~~~-----~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~g 465 (573)
T PRK05605 408 P-------------DET-----MPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEE----DGFIRIVD 465 (573)
T ss_pred C-------------Ccc-----CCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcC----CCcEEEEe
Confidence 0 122 45789999999653 5666 499999999975 67899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|.+|+++++|++|++.+|++++...
T Consensus 466 R~dd~i~~~G~~v~p~eIE~~l~~~ 490 (573)
T PRK05605 466 RIKELIITGGFNVYPAEVEEVLREH 490 (573)
T ss_pred ccccceeeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999753
No 32
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.33 E-value=4e-11 Score=135.35 Aligned_cols=148 Identities=13% Similarity=0.172 Sum_probs=87.2
Q ss_pred cCCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCCCCCcceeeecCceEEEEEecCCcc
Q 007568 309 LWPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRK 385 (598)
Q Consensus 309 lwP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~ 385 (598)
..++++ .+++|| .....+++++.+++++++ +.||+||+...+......++..... ...+..+.......
T Consensus 286 ~~~~lr---~~~~gG~~l~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 357 (563)
T PLN02860 286 VFPSVR---KILNGGGSLSSRLLPDAKKLFPNAKLF-SAYGMTEACSSLTFMTLHDPTLESP----KQTLQTVNQTKSSS 357 (563)
T ss_pred ccccee---EEEeCCCcCCHHHHHHHHHhcCCCcee-cCCCccccCcccccccccccccccc----hhhhhhhccccccc
Confidence 346777 455555 556667788888889999 9999999743222111100000000 00000010000000
Q ss_pred cCCCCCCCCC-CCCcccc-----CCCCCCCCeEEEEEcc---cCcee--------------ccccCCEEEEccccCCCCE
Q 007568 386 QDCNSAIDDF-IEDEPVP-----LSQVKLGQEYEIVLTS---FTGLY--------------RYRLGDVVEVAGFHKGTPK 442 (598)
Q Consensus 386 ~~~~~~~~~~-~~~~~l~-----~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~g~~~~~P~ 442 (598)
.. ...+ .-+.+++ +...++|+.+||+|.. ..|+| .|+|||++++.. ...
T Consensus 358 ~~----~~~~~~vG~p~~~~~v~i~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~----dG~ 429 (563)
T PLN02860 358 VH----QPQGVCVGKPAPHVELKIGLDESSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDK----AGN 429 (563)
T ss_pred cc----ccCCcccCCccCCcEEEEecCCCCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcC----CCC
Confidence 00 0000 0011111 1111268899999955 35665 389999999975 778
Q ss_pred EEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 443 LNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 443 i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+.|+||.+|+++++|++|++.+||+++.+.
T Consensus 430 l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 459 (563)
T PLN02860 430 LWLIGRSNDRIKTGGENVYPEEVEAVLSQH 459 (563)
T ss_pred EEEeecccceeEECCEEccHHHHHHHHHhC
Confidence 999999999999999999999999999754
No 33
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.33 E-value=1.1e-09 Score=125.33 Aligned_cols=133 Identities=8% Similarity=0.066 Sum_probs=86.9
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceee-cCCCC-----CCCCCcceeeecCceEEEEEe
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGV-NVDPS-----LPPEDVTFAVIPTFSYFEFIP 380 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~-~~~~~-----~~~~~~~~~l~~~~~~~EFip 380 (598)
.+.|+ .+.+|| .....+.+++.+ +++++ +.||+||+...+ ...+. ..++..+. ..|+ .-++.++
T Consensus 354 l~~lr---~i~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~-p~~g-~~~~i~d 426 (629)
T PRK10524 354 LSSLR---ALFLAGEPLDEPTASWISEAL-GVPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGV-PMYG-YNVKLLN 426 (629)
T ss_pred hhhee---EEEEeCCCCCHHHHHHHHHhc-CCCeE-eccccccccchhhcCCCCcccCcCCCCCccc-CcCC-ceEEEEe
Confidence 35677 445555 445556677777 48999 999999975211 11111 00111122 2222 2234444
Q ss_pred cCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc------Ccee-----------------ccccCCEEEEcccc
Q 007568 381 IHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF------TGLY-----------------RYRLGDVVEVAGFH 437 (598)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~------~Gl~-----------------RYr~GDvv~v~g~~ 437 (598)
.+ ++++ +.+|+.|||+|+.. .|+| .|+|||+++++.
T Consensus 427 ~~--------------~g~~-----~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~-- 485 (629)
T PRK10524 427 EV--------------TGEP-----CGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDA-- 485 (629)
T ss_pred CC--------------CCCC-----CCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcC--
Confidence 21 2333 45799999999753 2332 289999999974
Q ss_pred CCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 438 KGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 438 ~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
...+.|+||.+|++++.|++|.+.+||++|.+.
T Consensus 486 --dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~ 518 (629)
T PRK10524 486 --DGYYFILGRTDDVINVAGHRLGTREIEESISSH 518 (629)
T ss_pred --CCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhC
Confidence 678999999999999999999999999999854
No 34
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.33 E-value=2.5e-10 Score=126.32 Aligned_cols=133 Identities=17% Similarity=0.167 Sum_probs=86.9
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcc-eeecCCCCCC----CCCcceeeecCceEEEEEec
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESW-IGVNVDPSLP----PEDVTFAVIPTFSYFEFIPI 381 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~-i~~~~~~~~~----~~~~~~~l~~~~~~~EFip~ 381 (598)
.+++++ +..|| ....++.+++.+|..+++ +.||+||+. ++........ +...+. ..++ .-++.+++
T Consensus 280 ~~~l~~---v~~~g~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~d~ 353 (513)
T PRK07656 280 LSSLRL---AVTGAASMPVALLERFESELGVDIVL-TGYGLSEASGVTTFNRLDDDRKTVAGTIGT-AIAG-VENKIVNE 353 (513)
T ss_pred ccceee---EEecCCCCCHHHHHHHHHHcCCCceE-eEEccccCCCceeecCccccccccCCCccc-cCCC-cEEEEECC
Confidence 356774 34444 455566777777533788 999999983 3321111100 111111 2222 33444432
Q ss_pred CCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee----------c----cccCCEEEEccccCCCCEEE
Q 007568 382 HRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY----------R----YRLGDVVEVAGFHKGTPKLN 444 (598)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~----------R----Yr~GDvv~v~g~~~~~P~i~ 444 (598)
+ +. .+..|+.|||+|++. .|+| + |+|||+++.+. ...+.
T Consensus 354 ~---------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~~~ 409 (513)
T PRK07656 354 L---------------GE-----EVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDE----EGYLY 409 (513)
T ss_pred C---------------CC-----CCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcC----CeeEE
Confidence 1 22 256899999999764 3443 2 89999999975 67899
Q ss_pred EEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 445 FVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 445 f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
++||.+|++++.|++++..+||++|.+.
T Consensus 410 ~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 437 (513)
T PRK07656 410 IVDRKKDMFIVGGFNVYPAEVEEVLYEH 437 (513)
T ss_pred EEecccceEEeCCEEeCHHHHHHHHHhC
Confidence 9999999999999999999999999753
No 35
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.33 E-value=2.4e-10 Score=126.40 Aligned_cols=134 Identities=18% Similarity=0.189 Sum_probs=89.5
Q ss_pred cCCCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcce-eecCCCCC-------CCCCcceeeecCceEEEE
Q 007568 309 LWPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWI-GVNVDPSL-------PPEDVTFAVIPTFSYFEF 378 (598)
Q Consensus 309 lwP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i-~~~~~~~~-------~~~~~~~~l~~~~~~~EF 378 (598)
.+++++.| +.+|. ....++.+++.+ +++++ +.||+||+.. +....... .....+. ..+ +..++.
T Consensus 279 ~~~~l~~v--~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i 352 (521)
T PRK06187 279 DFSSLRLV--IYGGAALPPALLREFKEKF-GIDLV-QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGR-PLP-GVEARI 352 (521)
T ss_pred CcchhhEE--EEcCcCCCHHHHHHHHHHh-Ccchh-eeeccCccCcccccCCcccccccccccCCcccc-ccC-CeEEEE
Confidence 45678852 34443 556667777777 68999 9999999643 22211110 0111121 222 334455
Q ss_pred EecCCcccCCCCCCCCCCCCccccCCCCCC--CCeEEEEEccc---Ccee-c------------cccCCEEEEccccCCC
Q 007568 379 IPIHRRKQDCNSAIDDFIEDEPVPLSQVKL--GQEYEIVLTSF---TGLY-R------------YRLGDVVEVAGFHKGT 440 (598)
Q Consensus 379 ip~~~~~~~~~~~~~~~~~~~~l~~~eve~--G~~yeLVvTt~---~Gl~-R------------Yr~GDvv~v~g~~~~~ 440 (598)
++++ +.. +.. |+.|||+|++. .|++ + |+|||++++.. .
T Consensus 353 ~~~~---------------~~~-----~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~----~ 408 (521)
T PRK06187 353 VDDD---------------GDE-----LPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDE----D 408 (521)
T ss_pred ECCC---------------CCC-----CCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcC----C
Confidence 5532 222 334 99999999774 4444 3 99999999985 6
Q ss_pred CEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 441 PKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 441 P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
..+.+.||.+++++++|+++++.+|++++.+.
T Consensus 409 g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~ 440 (521)
T PRK06187 409 GYLYITDRIKDVIISGGENIYPRELEDALYGH 440 (521)
T ss_pred CCEEEeecccceEEcCCeEECHHHHHHHHHhC
Confidence 78999999999999999999999999988754
No 36
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.32 E-value=7.2e-10 Score=127.56 Aligned_cols=226 Identities=14% Similarity=0.129 Sum_probs=127.2
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhC-CCCeecCcccCCCcceeecCC-CCCC--CCCcceeeecCceEEEEEecCC
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAG-DLPLVSADYGSTESWIGVNVD-PSLP--PEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g-~~~i~~~~ygaSE~~i~~~~~-~~~~--~~~~~~~l~~~~~~~EFip~~~ 383 (598)
+.|+ .+.+|| .....+.+.+.++ ++++. +.||+||....+... +..+ ++..+. ..++ .-+..++.
T Consensus 383 ~sLr---~i~~~Ge~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g-~~~~ivd~-- 454 (655)
T PRK03584 383 SALR---TIGSTGSPLPPEGFDWVYEHVKADVWLA-SISGGTDICSCFVGGNPLLPVYRGEIQC-RGLG-MAVEAWDE-- 454 (655)
T ss_pred hheE---EEEEecCCCCHHHHHHHHHHhCCCceEE-eccChHhhhcccccCCCCCCcCCCccCC-CcCC-ceeEEECC--
Confidence 4677 445554 4455556666663 58888 999999963322111 1111 111111 1222 22222321
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc-----Ccee------c------------cccCCEEEEccccCCC
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF-----TGLY------R------------YRLGDVVEVAGFHKGT 440 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~-----~Gl~------R------------Yr~GDvv~v~g~~~~~ 440 (598)
++.. + .|+.|||+|... .|+| | |+|||+++++. .
T Consensus 455 -------------~g~~-----~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----d 511 (655)
T PRK03584 455 -------------DGRP-----V-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITE----H 511 (655)
T ss_pred -------------CCCC-----C-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECC----C
Confidence 1232 3 588999999752 3554 1 78999999974 6
Q ss_pred CEEEEEeecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEee-ccCCCCceEEEEEEecCCC--ccchHHHH
Q 007568 441 PKLNFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHA-DIVNQPGHYIIYWEIKGDV--EEGVLNQC 517 (598)
Q Consensus 441 P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~-~~~~~~~~Y~~~vE~~~~~--~~~~l~~~ 517 (598)
..+.|+||.||+++++|++|++.|||++|.+.. + +.+-.++. +.......-++||++..+. +.+..+++
T Consensus 512 G~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p------~--V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l 583 (655)
T PRK03584 512 GGVVIYGRSDATLNRGGVRIGTAEIYRQVEALP------E--VLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARI 583 (655)
T ss_pred CeEEEEeeccCeeecCcEEECHHHHHHHHHhCC------C--cceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHH
Confidence 789999999999999999999999999998642 2 22333322 1111223445677775432 22222333
Q ss_pred HHHHHhhcCCchhHhhhhcCCcCCeEEEEec------cchH-HHHHHHHhcCCCCCCCCCCCcccCCHHHHHHHhh
Q 007568 518 CHEMDVSFVDPGYVVSRRTNSIGPLELCIVK------RGAF-RMILDYFVGNGAALSQFKTPRCTSNQVLVRILND 586 (598)
Q Consensus 518 ~~~ld~~l~n~~Y~~~R~~g~l~p~~v~~v~------~g~f-~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 586 (598)
.+.+.+.| +. ...|-.|.+|+ .|-. .+.++. +..|...+|...+.-+.|++.++.+.+
T Consensus 584 ~~~~~~~L--~~--------~~~P~~i~~v~~lP~t~sGKi~r~~lr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (655)
T PRK03584 584 RTTIRTNL--SP--------RHVPDKIIAVPDIPRTLSGKKVELPVKK-LLHGRPVKKAVNRDALANPEALDWFAD 648 (655)
T ss_pred HHHHHhhC--CC--------CcCCCEEEECCCCCCCCCccchHHHHHH-HHcCCCCCCCCCcccccCHHHHHHHHH
Confidence 33444443 11 22355566653 2322 222222 234666666557777889999988754
No 37
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.32 E-value=4.5e-10 Score=126.05 Aligned_cols=131 Identities=17% Similarity=0.185 Sum_probs=89.9
Q ss_pred CCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcc-eeecCCCCC---CCCCcceeeecCceEEEEEecCCc
Q 007568 312 NAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESW-IGVNVDPSL---PPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 312 ~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~-i~~~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
+++ ++..|| ....++.+++.+++++++ +.||+||+. ++....... ..+..+. .. .+...++++.+
T Consensus 291 ~lr---~i~~gg~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~-~~~~~~i~d~~-- 362 (542)
T PRK07786 291 ALR---VLSWGAAPASDTLLRQMAATFPEAQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGK-VI-PTVAARVVDEN-- 362 (542)
T ss_pred ceE---EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccceEecCcccccccCCCccc-cC-CCceEEEECCC--
Confidence 456 444444 456777888888888999 999999974 222211110 0111222 12 23445555522
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec-------------cccCCEEEEccccCCCCEEEEEee
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR-------------YRLGDVVEVAGFHKGTPKLNFVCR 448 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R-------------Yr~GDvv~v~g~~~~~P~i~f~gR 448 (598)
.. ++.+|+.|||++.+ ..|+|+ |+|||+++... ...+.++||
T Consensus 363 -------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~----~g~~~i~GR 420 (542)
T PRK07786 363 -------------MN-----DVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDE----EGYVWVVDR 420 (542)
T ss_pred -------------CC-----CCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcC----CceEEEEec
Confidence 22 24578899999954 356663 99999999975 678999999
Q ss_pred cCceEeeceeecCHHHHHHHHHHH
Q 007568 449 RKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 449 ~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.++++++.|+++++.+|+++|.+.
T Consensus 421 ~~d~i~~~G~~v~~~eiE~~l~~~ 444 (542)
T PRK07786 421 KKDMIISGGENIYCAEVENVLASH 444 (542)
T ss_pred ccceEEeCCEEECHHHHHHHHHhC
Confidence 999999999999999999999753
No 38
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.32 E-value=1.3e-10 Score=130.75 Aligned_cols=132 Identities=20% Similarity=0.259 Sum_probs=89.8
Q ss_pred CCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcce-eecCCCCC---CCCCcceeeecCceEEEEEecCCc
Q 007568 312 NAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWI-GVNVDPSL---PPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 312 ~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i-~~~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
+|+ ++++|+ .....+++++.++..+++ .+||+||+.. .+...+.. ..+..+. ..|+ .-...++.+
T Consensus 292 ~lr---~~~~gg~~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~pg-~~v~Ivd~~-- 363 (534)
T COG0318 292 SLR---LVLSGGAPLPPELLERFEERFGPIAIL-EGYGLTETSPVVTINPPDDLLAKPGSVGR-PLPG-VEVRIVDPD-- 363 (534)
T ss_pred ceE---EEEecCCcCCHHHHHHHHHHhCCCceE-EeecccccCceeecCCCchhhhcCCcccc-cCCC-cEEEEEeCC--
Confidence 477 566666 467778888888766788 9999999853 33222221 1111222 2222 122222212
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEE---cccCceec--------------cccCCEEEEccccCCCCEEEEEe
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVL---TSFTGLYR--------------YRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVv---Tt~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~g 447 (598)
+.. +.+|+.|||.| +...|+|+ |+|||++.++. ...+.|+|
T Consensus 364 ------------~~~------~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~----~G~l~i~g 421 (534)
T COG0318 364 ------------GGE------VLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDE----DGYLYIVG 421 (534)
T ss_pred ------------CCc------cCCCCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcC----CccEEEEe
Confidence 111 22388999999 34577772 89999998886 68899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRGS 473 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~~ 473 (598)
|.+|+|+.+||+|++.+||.++.+..
T Consensus 422 R~kd~I~~gG~ni~p~eiE~~l~~~~ 447 (534)
T COG0318 422 RLKDLIISGGENIYPEEIEAVLAEHP 447 (534)
T ss_pred ccceEEEeCCeEECHHHHHHHHHhCC
Confidence 99999999999999999999999753
No 39
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.32 E-value=2.1e-10 Score=126.73 Aligned_cols=133 Identities=13% Similarity=0.137 Sum_probs=90.8
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCC---CC-CCCCcceeeecCceEEEEEecC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDP---SL-PPEDVTFAVIPTFSYFEFIPIH 382 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~---~~-~~~~~~~~l~~~~~~~EFip~~ 382 (598)
.++++. +.+|| ....++.+++.+++++++ +.||+||+........ .. .++..+. ..++ .-.+.++.+
T Consensus 263 ~~~l~~---~~~gG~~~~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~~~~ 336 (497)
T PRK06145 263 LDSLAW---CIGGGEKTPESRIRDFTRVFTRARYI-DAYGLTETCSGDTLMEAGREIEKIGSTGR-ALAH-VEIRIADGA 336 (497)
T ss_pred cccceE---EEecCCCCCHHHHHHHHHHcCCCceE-EeecCcccCCcceeccCccccccCCCccc-CCCC-ceEEEECCC
Confidence 356773 44455 555667788888888999 9999999754221110 11 1111222 2222 233444311
Q ss_pred CcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee-------------ccccCCEEEEccccCCCCEEEEE
Q 007568 383 RRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY-------------RYRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~ 446 (598)
... +.+|+.+||++++ ..|+| .|+|||+++... ...+.++
T Consensus 337 ---------------~~~-----~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~ 392 (497)
T PRK06145 337 ---------------GRW-----LPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDE----EGFLYLT 392 (497)
T ss_pred ---------------CCC-----CCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcC----CCcEEEe
Confidence 222 4578899999965 46776 399999999985 6789999
Q ss_pred eecCceEeeceeecCHHHHHHHHHHH
Q 007568 447 CRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 447 gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
||.++++++.|+++.+.+||++|.+.
T Consensus 393 GR~~~~i~~~G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 393 DRKKDMIISGGENIASSEVERVIYEL 418 (497)
T ss_pred ccccceEEeCCeEECHHHHHHHHHhC
Confidence 99999999999999999999999865
No 40
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.32 E-value=2.8e-10 Score=125.65 Aligned_cols=133 Identities=17% Similarity=0.262 Sum_probs=85.1
Q ss_pred CCCCceeEEEEccChHHHHHHHHHHh-CCCCeecCcccCCCcce--eecCCCC---CCCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGSMQHYLKKLRHYA-GDLPLVSADYGSTESWI--GVNVDPS---LPPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~~~~y~~~l~~~~-g~~~i~~~~ygaSE~~i--~~~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
.++++ .+.+||.......+++++ .+++++ +.||+||+.. +++.++. ..++..+. . ..+..+++++.+
T Consensus 251 ~~~l~---~~~~gG~~~~~~~~~~~~~~g~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~-~-~~~~~~~i~d~~- 323 (488)
T PRK09088 251 LRHLT---ALFTGGAPHAAEDILGWLDDGIPMV-DGFGMSEAGTVFGMSVDCDVIRAKAGAAGI-P-TPTVQTRVVDDQ- 323 (488)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHhCCcee-eeecccccccccccCCCcccccccCCcccc-C-CCCcEEEEECCC-
Confidence 35677 455555222222233222 158999 8999999743 2221111 11111222 2 233445555422
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec--------------cccCCEEEEccccCCCCEEEEE
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR--------------YRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~ 446 (598)
+.. +..|+.|||+|++ ..|+|+ |+|||+++++. ...+.|+
T Consensus 324 --------------~~~-----~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~ 380 (488)
T PRK09088 324 --------------GND-----CPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDA----DGFFWVV 380 (488)
T ss_pred --------------CCC-----CcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcC----CCcEEEe
Confidence 222 4578899999976 355553 99999999985 6789999
Q ss_pred eecCceEeeceeecCHHHHHHHHHHH
Q 007568 447 CRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 447 gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
||.+|++++.|++|++.+||++|.+.
T Consensus 381 GR~~d~i~~~G~~i~~~~iE~~l~~~ 406 (488)
T PRK09088 381 DRKKDMFISGGENVYPAEIEAVLADH 406 (488)
T ss_pred ccccceEEeCCEEECHHHHHHHHHhC
Confidence 99999999999999999999998753
No 41
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.31 E-value=7e-10 Score=124.17 Aligned_cols=135 Identities=18% Similarity=0.172 Sum_probs=90.5
Q ss_pred cCCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCC-------CCCCCCcceeeecCceEEEE
Q 007568 309 LWPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDP-------SLPPEDVTFAVIPTFSYFEF 378 (598)
Q Consensus 309 lwP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~-------~~~~~~~~~~l~~~~~~~EF 378 (598)
-++++++ +.+|| ....++.+++.+ +++++ +.||+||+...+...+ ..+....+.+....+.-.+.
T Consensus 293 ~~~~lr~---i~~~G~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i 367 (534)
T PRK05852 293 KPAALRF---IRSCSAPLTAETAQALQTEF-AAPVV-CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRI 367 (534)
T ss_pred cCCCeeE---EEECCCCCCHHHHHHHHHHh-CCChh-hccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEE
Confidence 3567884 44443 456667788878 48998 8999999743221110 00101122221123344455
Q ss_pred EecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Cceec-------------cccCCEEEEccccCCCCE
Q 007568 379 IPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLYR-------------YRLGDVVEVAGFHKGTPK 442 (598)
Q Consensus 379 ip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~R-------------Yr~GDvv~v~g~~~~~P~ 442 (598)
++.+ ++. +.+|+.+||+|++. .|+|+ |+|||+++.+. ...
T Consensus 368 ~d~~---------------g~~-----~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~----dG~ 423 (534)
T PRK05852 368 VGSD---------------GLP-----LPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSA----AGD 423 (534)
T ss_pred ECCC---------------CCC-----CCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeC----CCc
Confidence 5422 232 45899999999664 45653 89999999984 668
Q ss_pred EEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 443 LNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 443 i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+.|+||.+|+++++|++|++.+|++++.+.
T Consensus 424 l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~ 453 (534)
T PRK05852 424 LSIRGRIKELINRGGEKISPERVEGVLASH 453 (534)
T ss_pred EEEEecchhhEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999999999999754
No 42
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.31 E-value=3.3e-10 Score=124.98 Aligned_cols=133 Identities=19% Similarity=0.217 Sum_probs=85.7
Q ss_pred CCCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCCC-------CCcceeeecCceEEEEEe
Q 007568 310 WPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPP-------EDVTFAVIPTFSYFEFIP 380 (598)
Q Consensus 310 wP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~-------~~~~~~l~~~~~~~EFip 380 (598)
.|+++.+ +.+|+ .....+.+++.+++++++ +.||+||....+...+.++. ...++ ..++... ..++
T Consensus 259 ~~~l~~i--~~~G~~l~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~-~i~d 333 (503)
T PRK04813 259 LPNLTHF--LFCGEELPHKTAKKLLERFPSATIY-NTYGPTEATVAVTSIEITDEMLDQYKRLPIGY-AKPDSPL-LIID 333 (503)
T ss_pred CCCceEE--EEecCcCCHHHHHHHHHHCCCceEE-eCcccchheeEEEEEEecccccccCCCCcccc-cCCCCEE-EEEC
Confidence 4678854 23333 566777788888788899 99999996432221111110 00111 1111111 1122
Q ss_pred cCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee-----------------ccccCCEEEEccccCCC
Q 007568 381 IHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY-----------------RYRLGDVVEVAGFHKGT 440 (598)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-----------------RYr~GDvv~v~g~~~~~ 440 (598)
. ++.. +.+|+.|||+|++. .|+| .|+|||++++ . .
T Consensus 334 ~---------------~~~~-----~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~----~ 388 (503)
T PRK04813 334 E---------------EGTK-----LPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-E----D 388 (503)
T ss_pred C---------------CCCC-----CCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-e----C
Confidence 1 1222 45788999999763 2222 3999999998 4 5
Q ss_pred CEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 441 PKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 441 P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
..+.+.||.+|+++++|+++++.+|++++.+.
T Consensus 389 g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 420 (503)
T PRK04813 389 GLLFYQGRIDFQIKLNGYRIELEEIEQNLRQS 420 (503)
T ss_pred CeEEEeccccceEEECcEEeCHHHHHHHHHhC
Confidence 78999999999999999999999999999864
No 43
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.31 E-value=8.1e-10 Score=122.52 Aligned_cols=133 Identities=18% Similarity=0.193 Sum_probs=87.3
Q ss_pred CCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcc-eeecCCCC---CCCCCcceeeecCceEEEEEecCCc
Q 007568 311 PNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESW-IGVNVDPS---LPPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 311 P~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~-i~~~~~~~---~~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
++++. ++.+|+ .....+.+++.+++++++ +.||+||+. ++....+. ......+. ..++ .-+..++.
T Consensus 286 ~~l~~--~~~gg~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~~~--- 357 (523)
T PRK08316 286 SSLRK--GYYGASIMPVEVLKELRERLPGLRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGR-PVLN-VETRVVDD--- 357 (523)
T ss_pred ccceE--EEEcCCcCCHHHHHHHHHHcCCCcee-eeecccccCccccccCccccccccCCccc-CCCC-cEEEEEcC---
Confidence 45663 233443 455667788888788999 999999964 33221111 00111121 1112 12222221
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee-------------ccccCCEEEEccccCCCCEEEEEee
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCR 448 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR 448 (598)
++.. +..|+.|||++++. .|+| .|+|||+++++. ...+.++||
T Consensus 358 ------------~~~~-----~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~i~gR 416 (523)
T PRK08316 358 ------------DGND-----VAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDE----EGYITVVDR 416 (523)
T ss_pred ------------CCCC-----CCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcC----CceEEEecc
Confidence 1233 44688999999763 4555 399999999985 678999999
Q ss_pred cCceEeeceeecCHHHHHHHHHHH
Q 007568 449 RKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 449 ~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.++++++.|++|++.+|++++.+.
T Consensus 417 ~~~~i~~~G~~i~~~~iE~~l~~~ 440 (523)
T PRK08316 417 KKDMIKTGGENVASREVEEALYTH 440 (523)
T ss_pred cccEEEeCCeEECHHHHHHHHHhC
Confidence 999999999999999999999754
No 44
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.31 E-value=1.3e-10 Score=128.24 Aligned_cols=128 Identities=16% Similarity=0.074 Sum_probs=89.6
Q ss_pred EEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCC---CCCCcceeeecCceEEEEEecCCcccCCCCCC
Q 007568 318 SIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSL---PPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAI 392 (598)
Q Consensus 318 ~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~ 392 (598)
.+.+|+ .....+++.+.+++++++ +.||+||+.......+.. .+...+. ..+ +..++.++.+
T Consensus 258 ~~~~G~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~d~~---------- 324 (487)
T PRK07638 258 IISSGAKWEAEAKEKIKNIFPYAKLY-EFYGASELSFVTALVDEESERRPNSVGR-PFH-NVQVRICNEA---------- 324 (487)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCeEE-EEecCCccCceEEecccccCCCCCCCCc-ccC-CcEEEEECCC----------
Confidence 345555 556667788888889999 899999985433222111 1111222 122 3445555422
Q ss_pred CCCCCCccccCCCCCCCCeEEEEEccc---Ccee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeec
Q 007568 393 DDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVN 456 (598)
Q Consensus 393 ~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~ 456 (598)
+.+ +++|+.+||+|++. .|+| .|+|||++++.. ...+.|+||.+|+++++
T Consensus 325 -----g~~-----~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~----~g~l~i~GR~~d~i~~~ 390 (487)
T PRK07638 325 -----GEE-----VQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDE----EGFIYIVGREKNMILFG 390 (487)
T ss_pred -----CCC-----CCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcC----CCeEEEEecCCCeEEeC
Confidence 232 56899999999653 5555 379999999885 77899999999999999
Q ss_pred eeecCHHHHHHHHHHH
Q 007568 457 IDKNTEKDLQLVVDRG 472 (598)
Q Consensus 457 Gekv~e~~v~~av~~~ 472 (598)
|++|++.+||+++.+.
T Consensus 391 G~~v~~~eiE~~l~~~ 406 (487)
T PRK07638 391 GINIFPEEIESVLHEH 406 (487)
T ss_pred CEEECHHHHHHHHHhC
Confidence 9999999999999864
No 45
>PLN02246 4-coumarate--CoA ligase
Probab=99.29 E-value=4.3e-10 Score=125.98 Aligned_cols=133 Identities=14% Similarity=0.159 Sum_probs=88.0
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC-------CCCCCcceeeecCceEEEEEe
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS-------LPPEDVTFAVIPTFSYFEFIP 380 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~-------~~~~~~~~~l~~~~~~~EFip 380 (598)
++++. ++.|| .....+.+++.++++++. ..||+||+...+..... ..++..+. ..++ .-.+.++
T Consensus 298 ~~lr~---~~~gg~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d 371 (537)
T PLN02246 298 SSIRM---VLSGAAPLGKELEDAFRAKLPNAVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGT-VVRN-AELKIVD 371 (537)
T ss_pred cceeE---EEEecCcCCHHHHHHHHHHcCCCeEe-ccccccccCcccccccccCCCCccccCCcccc-ccCC-cEEEEec
Confidence 56774 44444 456667788888778888 99999997432211000 00111222 1122 2333343
Q ss_pred cCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee--------------ccccCCEEEEccccCCCCEE
Q 007568 381 IHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY--------------RYRLGDVVEVAGFHKGTPKL 443 (598)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~g~~~~~P~i 443 (598)
++ +.. ++..|+.+||+|+. ..|+| .|+|||+++++. ...+
T Consensus 372 ~~--------------~~~-----~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l 428 (537)
T PLN02246 372 PE--------------TGA-----SLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDD----DDEL 428 (537)
T ss_pred CC--------------CCC-----cCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeC----CCeE
Confidence 22 122 35679999999965 34554 378999999985 6689
Q ss_pred EEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 444 NFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 444 ~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.|+||.+++++++|++|+..+||+++.+.
T Consensus 429 ~~~GR~dd~i~~~G~~i~~~eIE~~l~~~ 457 (537)
T PLN02246 429 FIVDRLKELIKYKGFQVAPAELEALLISH 457 (537)
T ss_pred EEEecccceEEECCEEECcHHHHHHHHhC
Confidence 99999999999999999999999999854
No 46
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.28 E-value=7.6e-10 Score=124.13 Aligned_cols=134 Identities=14% Similarity=0.137 Sum_probs=89.0
Q ss_pred CCCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCC-----CCCcceeeecCceEEEEEecC
Q 007568 310 WPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLP-----PEDVTFAVIPTFSYFEFIPIH 382 (598)
Q Consensus 310 wP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~-----~~~~~~~l~~~~~~~EFip~~ 382 (598)
+++++.+ +.+|. .....+.+.+.+++.++. ..||+||+.........++ +...|. ..+ +..++.++++
T Consensus 316 ~~~lr~i--~~~G~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~-~~~~~i~d~~ 390 (558)
T PRK12583 316 LSSLRTG--IMAGAPCPIEVMRRVMDEMHMAEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGR-TQP-HLEVKVVDPD 390 (558)
T ss_pred chhheEE--EecCCCCCHHHHHHHHHHcCCccee-ccccccccccceeccCcccccccccCCCCc-cCC-CCeEEEECCC
Confidence 4678843 34443 555566677777666788 9999999753222111110 111222 122 2344555422
Q ss_pred CcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee--------------ccccCCEEEEccccCCCCEEEE
Q 007568 383 RRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY--------------RYRLGDVVEVAGFHKGTPKLNF 445 (598)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f 445 (598)
+. ++..|+.|||+|++. .|+| .|+|||+++++. ...+.|
T Consensus 391 ---------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----dg~l~i 446 (558)
T PRK12583 391 ---------------GA-----TVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDE----QGYVRI 446 (558)
T ss_pred ---------------CC-----CCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECC----CccEEE
Confidence 22 356899999999653 4554 389999999975 678999
Q ss_pred EeecCceEeeceeecCHHHHHHHHHHH
Q 007568 446 VCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 446 ~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.||.+++++++|++|++.+|+++|.+.
T Consensus 447 ~GR~~~~i~~~G~~v~~~~IE~~l~~~ 473 (558)
T PRK12583 447 VGRSKDMIIRGGENIYPREIEEFLFTH 473 (558)
T ss_pred EecccceeEECCEEeCHHHHHHHHHhC
Confidence 999999999999999999999999753
No 47
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.28 E-value=8.1e-10 Score=122.39 Aligned_cols=134 Identities=22% Similarity=0.303 Sum_probs=88.0
Q ss_pred CCCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCC---CCCCcceeeecCceEEEEEecCCc
Q 007568 310 WPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSL---PPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 310 wP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
.++++++ +.+|+ .....+.+++.+++++++ +.||+||+.......+.. .++..+. ..++ ..+..++.+
T Consensus 273 ~~~l~~~--~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~~~~-- 345 (515)
T TIGR03098 273 APSLRYL--TNSGGAMPRATLSRLRSFLPNARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIGK-AIPN-AEVLVLRED-- 345 (515)
T ss_pred ccceEEE--EecCCcCCHHHHHHHHHHCCCCeEe-eeeccccccceEecccccccCCCCCcce-ecCC-CEEEEECCC--
Confidence 3467742 23343 556667788888778888 999999975433222211 1111222 2222 233334311
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee-------------------------ccccCCEEEEccc
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY-------------------------RYRLGDVVEVAGF 436 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-------------------------RYr~GDvv~v~g~ 436 (598)
+.. +..|+.|||++.+ ..|+| .|+|||++++..
T Consensus 346 -------------~~~-----~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~- 406 (515)
T TIGR03098 346 -------------GSE-----CAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDE- 406 (515)
T ss_pred -------------CCC-----CCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcC-
Confidence 222 3468889999955 24444 378999999874
Q ss_pred cCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 437 HKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 437 ~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
...+.+.||.+|++++.|++|++.+||+++.+.
T Consensus 407 ---~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~ 439 (515)
T TIGR03098 407 ---EGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYAT 439 (515)
T ss_pred ---CceEEEEeccccceecCCEEeCHHHHHHHHhcC
Confidence 568999999999999999999999999999854
No 48
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.28 E-value=1.6e-10 Score=123.84 Aligned_cols=134 Identities=19% Similarity=0.224 Sum_probs=88.9
Q ss_pred CCCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcceeec---CCCCCCC----CCcceeeecCceEEEEEe
Q 007568 310 WPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWIGVN---VDPSLPP----EDVTFAVIPTFSYFEFIP 380 (598)
Q Consensus 310 wP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~---~~~~~~~----~~~~~~l~~~~~~~EFip 380 (598)
.++++.| +.+|+ ....++.+++.+++++++ ..||+||+...+. ....... ...+. ..++ .-...++
T Consensus 233 ~~~l~~v--~~~g~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~~ 307 (408)
T TIGR01733 233 LASLRLV--ILGGEALTPALVDRWRARGPGARLI-NLYGPTETTVWSTATLVDADDAPRESPVPIGR-PLAN-TRLYVLD 307 (408)
T ss_pred ccCceEE--EEeCccCCHHHHHHHHHhCCCcEEE-ecccCCceEEEEEEEEcCccccCCccccccCc-ccCC-ceEEEEC
Confidence 4578853 23333 566777788888778999 9999999744221 1111110 00111 1122 2222222
Q ss_pred cCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee----------------------ccccCCEEEEcc
Q 007568 381 IHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY----------------------RYRLGDVVEVAG 435 (598)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~----------------------RYr~GDvv~v~g 435 (598)
++ .+ .+..|+.+||+|+.. .|+| .|+|||+++++.
T Consensus 308 ~~---------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~ 367 (408)
T TIGR01733 308 DD---------------LR-----PVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLP 367 (408)
T ss_pred CC---------------CC-----CCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcC
Confidence 11 22 245799999999763 4454 599999999985
Q ss_pred ccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 436 FHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 436 ~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
...+.|+||.+|+++++|+++++.+|++++...
T Consensus 368 ----~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~ 400 (408)
T TIGR01733 368 ----DGNLEFLGRIDDQVKIRGYRIELGEIEAALLRH 400 (408)
T ss_pred ----CCCEEEeeccCCEEEeCeEEechHHHHHHHhcC
Confidence 567999999999999999999999999999743
No 49
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.28 E-value=4.9e-10 Score=125.75 Aligned_cols=132 Identities=12% Similarity=0.077 Sum_probs=89.3
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC---CCCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS---LPPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
+++++ .+..|| ....+.++++.+| .+++ +.||+||+.......+. ..++..|. ..+ +.-+++++.+
T Consensus 311 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~-~~~~~i~d~~- 382 (537)
T PRK13382 311 GRSLR---FAAASGSRMRPDVVIAFMDQFG-DVIY-NNYNATEAGMIATATPADLRAAPDTAGR-PAE-GTEIRILDQD- 382 (537)
T ss_pred cccee---EEEEcCCCCCHHHHHHHHHHcC-CcEE-ecccccccCcceecChhHhccCCCCccc-cCc-CcEEEEECCC-
Confidence 35677 445554 5566777888785 6888 99999997543221111 01111222 122 3344555422
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee----------ccccCCEEEEccccCCCCEEEEEeecC
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY----------RYRLGDVVEVAGFHKGTPKLNFVCRRK 450 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~----------RYr~GDvv~v~g~~~~~P~i~f~gR~~ 450 (598)
+. ++..|+.+||+|++. .|++ .|+|||+++... ...+.|+||.+
T Consensus 383 --------------~~-----~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~d 439 (537)
T PRK13382 383 --------------FR-----EVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDE----NGRLFVVGRDD 439 (537)
T ss_pred --------------CC-----CCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEeC----CCcEEEecccc
Confidence 22 245799999999763 3432 589999999985 67899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 007568 451 LILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 451 ~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|++++.|++|++.+|+.+|.+.
T Consensus 440 d~ik~~G~~v~~~eIE~~l~~~ 461 (537)
T PRK13382 440 EMIVSGGENVYPIEVEKTLATH 461 (537)
T ss_pred ceeEECCEEECHHHHHHHHHhC
Confidence 9999999999999999999864
No 50
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.27 E-value=4.1e-10 Score=138.98 Aligned_cols=131 Identities=16% Similarity=0.250 Sum_probs=87.4
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCCC---------CCcceeeecCceEEEE
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPP---------EDVTFAVIPTFSYFEF 378 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~---------~~~~~~l~~~~~~~EF 378 (598)
++++. ++.|| .....+++++.+ +++++ +.||+||+.+.....+..+. ...|. ..++..+ ..
T Consensus 717 ~~lr~---i~~gGe~l~~~~~~~~~~~~-~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~-~i 789 (1296)
T PRK10252 717 ASLRQ---VFCSGEALPADLCREWQQLT-GAPLH-NLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGY-PVWNTGL-RI 789 (1296)
T ss_pred CCccE---EEEecCCCCHHHHHHHHhcC-CCEEE-eCCCcchhhheeeeeecccccccccCCCCCCccc-ccCCCEE-EE
Confidence 56884 34444 455556676666 58899 99999997543322211110 00122 2223222 22
Q ss_pred EecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee--------------------ccccCCEEEEcc
Q 007568 379 IPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY--------------------RYRLGDVVEVAG 435 (598)
Q Consensus 379 ip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------------RYr~GDvv~v~g 435 (598)
++ + +.+. +..|..|||+|+.. .|+| -|+|||+++...
T Consensus 790 ~d--~-------------~~~~-----~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~ 849 (1296)
T PRK10252 790 LD--A-------------RMRP-----VPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLD 849 (1296)
T ss_pred EC--C-------------CCCC-----CCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcC
Confidence 22 1 1333 45899999999763 4544 299999999985
Q ss_pred ccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 436 FHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 436 ~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
...+.|+||.|++++++|++|...+|+.+|.+.
T Consensus 850 ----~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~ 882 (1296)
T PRK10252 850 ----DGAVEYLGRSDDQLKIRGQRIELGEIDRAMQAL 882 (1296)
T ss_pred ----CCcEEEecccCCeEEEeeEEecHHHHHHHHHhC
Confidence 678999999999999999999999999999864
No 51
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.27 E-value=6.9e-11 Score=136.51 Aligned_cols=135 Identities=19% Similarity=0.284 Sum_probs=87.7
Q ss_pred CCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcceeecCC-CCC--CCCCcceeeecCceEEEEEecCCcc
Q 007568 311 PNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVD-PSL--PPEDVTFAVIPTFSYFEFIPIHRRK 385 (598)
Q Consensus 311 P~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~-~~~--~~~~~~~~l~~~~~~~EFip~~~~~ 385 (598)
++|++ +.+|+ ......++.+.+++++++ ++||+||+...+... +.. .++..|. ..|+. -+-.+++++.
T Consensus 386 ~~lr~---~~~Gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~pg~-evki~d~~~~- 458 (666)
T PLN02614 386 GNVRI---ILSGAAPLASHVESFLRVVACCHVL-QGYGLTESCAGTFVSLPDELDMLGTVGP-PVPNV-DIRLESVPEM- 458 (666)
T ss_pred CcEEE---EEEcCCCCCHHHHHHHHHhcCCCEE-eeCchHhhhhheeeeccccCCcCCcccC-cCCce-EEEEeeeccc-
Confidence 46774 34554 334445566667678999 999999974322111 111 1122333 22332 1223332211
Q ss_pred cCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec-------------cccCCEEEEccccCCCCEEEEEeec
Q 007568 386 QDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR-------------YRLGDVVEVAGFHKGTPKLNFVCRR 449 (598)
Q Consensus 386 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R-------------Yr~GDvv~v~g~~~~~P~i~f~gR~ 449 (598)
+.. ++.+|+.|||+|.. +.|||+ |+|||+++++. ...+.|+||.
T Consensus 459 -----------~~~-----~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~gR~ 518 (666)
T PLN02614 459 -----------EYD-----ALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQP----NGSMKIIDRK 518 (666)
T ss_pred -----------Ccc-----cCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcC----CCCEEEEEcc
Confidence 122 24579999999943 578884 99999999985 6789999999
Q ss_pred CceEee-ceeecCHHHHHHHHHHH
Q 007568 450 KLILTV-NIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 450 ~~~l~~-~Gekv~e~~v~~av~~~ 472 (598)
+|++++ .|++|++.+||+++.+.
T Consensus 519 kd~ik~~~G~~V~p~eIE~~l~~~ 542 (666)
T PLN02614 519 KNIFKLSQGEYVAVENIENIYGEV 542 (666)
T ss_pred hhceecCCCeeecHHHHHHHHhcC
Confidence 999996 69999999999998753
No 52
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.27 E-value=6.2e-10 Score=124.89 Aligned_cols=125 Identities=18% Similarity=0.213 Sum_probs=81.4
Q ss_pred hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCCCCCcceeeecCceEEEEEecCCcccCCCCCCCCCCCCccccC
Q 007568 324 MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPL 403 (598)
Q Consensus 324 ~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~l~~ 403 (598)
..+...++.+.+ +++++ +.||+||+.+.+...+..+++..+. ..++ ++++..+. +..+..
T Consensus 278 ~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~g~-~~~~---~~i~~~~~--------------~~~~~~ 337 (529)
T PRK07867 278 APGDIARFARRF-GCVVV-DGFGSTEGGVAITRTPDTPPGALGP-LPPG---VAIVDPDT--------------GTECPP 337 (529)
T ss_pred ChHHHHHHHHHh-CCcEE-EeecccccccccccCCCCCCCCcCC-CCCC---EEEEECCC--------------CCCCCC
Confidence 444456667777 58999 9999999754433222222221222 2222 56665321 122111
Q ss_pred CC-------CCCCCeEEEEE-cc---cCcee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceee
Q 007568 404 SQ-------VKLGQEYEIVL-TS---FTGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDK 459 (598)
Q Consensus 404 ~e-------ve~G~~yeLVv-Tt---~~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gek 459 (598)
.+ ...|..+||++ .. +.|+| +|+|||+++++. ...+.|+||.+|+++++|+|
T Consensus 338 g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~~~GR~~d~i~~~G~~ 413 (529)
T PRK07867 338 AEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDA----DGYAYFAGRLGDWMRVDGEN 413 (529)
T ss_pred CccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeC----CCcEEEeccccCeEEECCEE
Confidence 11 01122799998 33 36666 699999999975 67899999999999999999
Q ss_pred cCHHHHHHHHHHH
Q 007568 460 NTEKDLQLVVDRG 472 (598)
Q Consensus 460 v~e~~v~~av~~~ 472 (598)
|++.+||.++.+.
T Consensus 414 v~p~eIE~~l~~~ 426 (529)
T PRK07867 414 LGTAPIERILLRY 426 (529)
T ss_pred eCHHHHHHHHHhC
Confidence 9999999999864
No 53
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.27 E-value=1.4e-09 Score=119.94 Aligned_cols=131 Identities=12% Similarity=0.184 Sum_probs=86.1
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcce-eecCCCCC---CCCCcceeeecCceEEEEEecC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWI-GVNVDPSL---PPEDVTFAVIPTFSYFEFIPIH 382 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i-~~~~~~~~---~~~~~~~~l~~~~~~~EFip~~ 382 (598)
++.+++ +..|| .....+.+++. ++++. +.||+||+.. ........ ..+..+. ..++ .-++.++.+
T Consensus 263 ~~~lr~---~~~gG~~~~~~~~~~~~~~--g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-p~~~-~~~~i~d~~ 334 (496)
T PRK06839 263 LQSVRW---FYNGGAPCPEELMREFIDR--GFLFG-QGFGMTETSPTVFMLSEEDARRKVGSIGK-PVLF-CDYELIDEN 334 (496)
T ss_pred Ccccce---EEECCCCCCHHHHHHHHHh--CCeeE-eeccCCCCCcceEecccccccccCCCCcc-cCCC-ceEEEECCC
Confidence 456774 44444 55566666664 58988 9999999753 22211111 1111121 1122 233444422
Q ss_pred CcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Cceec-------------cccCCEEEEccccCCCCEEEEE
Q 007568 383 RRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLYR-------------YRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~R-------------Yr~GDvv~v~g~~~~~P~i~f~ 446 (598)
+.. +.+|+.|||+|++. .|+|. |+|||+++.+. ...+.|+
T Consensus 335 ---------------~~~-----~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~ 390 (496)
T PRK06839 335 ---------------KNK-----VEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDE----DGFVYIV 390 (496)
T ss_pred ---------------cCC-----CCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcC----CCcEEEe
Confidence 222 56899999999764 35542 89999999975 6789999
Q ss_pred eecCceEeeceeecCHHHHHHHHHHH
Q 007568 447 CRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 447 gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
||.+|+++..|++|.+.+|++++.+.
T Consensus 391 GR~~d~i~~~G~~v~p~~iE~~l~~~ 416 (496)
T PRK06839 391 GRKKEMIISGGENIYPLEVEQVINKL 416 (496)
T ss_pred ccccceEEECCEEECHHHHHHHHHhC
Confidence 99999999999999999999999754
No 54
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.27 E-value=7.9e-10 Score=123.75 Aligned_cols=62 Identities=19% Similarity=0.173 Sum_probs=53.5
Q ss_pred CCCCCeEEEEEcc---cCceec---------cccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 406 VKLGQEYEIVLTS---FTGLYR---------YRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 406 ve~G~~yeLVvTt---~~Gl~R---------Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+..|+.+||+|.. ..|+|. |+|||+++.. ...+.|+||.+|+++++|++|++.+||++|.+.
T Consensus 367 ~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~-----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 367 VAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV-----DGGLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred CCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE-----CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 5679999999965 357763 9999999874 357999999999999999999999999999874
No 55
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.26 E-value=6.8e-10 Score=124.51 Aligned_cols=133 Identities=17% Similarity=0.203 Sum_probs=87.6
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeec-CCCCC--CCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVN-VDPSL--PPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~-~~~~~--~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
.++++ ++..|| .....+++.+.+ +++++ +.||+||+.+... .+... .....+..+.|+. ..+.++.
T Consensus 299 ~~~l~---~v~~gg~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~-~v~i~d~-- 370 (536)
T PRK10946 299 LASLK---LLQVGGARLSETLARRIPAEL-GCQLQ-QVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDD-EVWVADA-- 370 (536)
T ss_pred cccee---EEEECCCCCCHHHHHHHHHhc-CCeEE-EeecccccceeeecCCCccccccccCCcccCCCc-eEEEECC--
Confidence 46778 455555 445556666767 58999 9999999755432 11100 0011122111221 2222221
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee--------------ccccCCEEEEccccCCCCEEEEE
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY--------------RYRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~ 446 (598)
+++. +..|+.+||+|+. ..|+| .|+|||+++.+. ...+.|+
T Consensus 371 -------------~~~~-----~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~----~G~l~~~ 428 (536)
T PRK10946 371 -------------DGNP-----LPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDP----DGYITVV 428 (536)
T ss_pred -------------CCCC-----CCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECC----CCcEEEe
Confidence 1232 4589999999954 45665 399999999985 6789999
Q ss_pred eecCceEeeceeecCHHHHHHHHHHH
Q 007568 447 CRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 447 gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
||.+|+++++|++|++.+|+.+|.+.
T Consensus 429 gR~~d~i~~~G~~v~~~eiE~~l~~~ 454 (536)
T PRK10946 429 GREKDQINRGGEKIAAEEIENLLLRH 454 (536)
T ss_pred ccccceeecCCEEEcHHHHHHHHHhC
Confidence 99999999999999999999999853
No 56
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.26 E-value=8e-11 Score=135.46 Aligned_cols=135 Identities=16% Similarity=0.189 Sum_probs=86.4
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCC-C-CCCCCCcceeeecCceEEEEEecCCcc
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVD-P-SLPPEDVTFAVIPTFSYFEFIPIHRRK 385 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~-~-~~~~~~~~~~l~~~~~~~EFip~~~~~ 385 (598)
+++++ +.+|| .....+.+++.+ +++++ ++||+||+...+... + ...++..|. ..|+ .-..+++.++.
T Consensus 376 ~~lr~---~~~gGa~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~pg-~~v~i~d~~~~- 447 (651)
T PLN02736 376 GRVRF---MSSGASPLSPDVMEFLRICF-GGRVL-EGYGMTETSCVISGMDEGDNLSGHVGS-PNPA-CEVKLVDVPEM- 447 (651)
T ss_pred CcEEE---EEeCCCCCCHHHHHHHHHHh-CCCeE-EEechHHhchheeccCCCCCCCCccCC-ccCc-eEEEEEEcccc-
Confidence 46774 44454 445555666667 47888 999999975433211 1 111112222 2222 33445543211
Q ss_pred cCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec--------------cccCCEEEEccccCCCCEEEEEee
Q 007568 386 QDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR--------------YRLGDVVEVAGFHKGTPKLNFVCR 448 (598)
Q Consensus 386 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~gR 448 (598)
.. ..+.+++..|||.|.. +.|+|. |+|||+++++. ...+.|+||
T Consensus 448 -------------~~--~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~----dG~l~i~GR 508 (651)
T PLN02736 448 -------------NY--TSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLP----GGRLKIIDR 508 (651)
T ss_pred -------------Cc--ccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcC----CCcEEEEEe
Confidence 00 0122345568999944 567773 89999999985 678999999
Q ss_pred cCceEee-ceeecCHHHHHHHHHHH
Q 007568 449 RKLILTV-NIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 449 ~~~~l~~-~Gekv~e~~v~~av~~~ 472 (598)
.+|++++ +|++|++.+||+++.+.
T Consensus 509 ~kd~ik~~~G~~V~p~eIE~~l~~~ 533 (651)
T PLN02736 509 KKNIFKLAQGEYIAPEKIENVYAKC 533 (651)
T ss_pred chhheEcCCCcEechHHHHHHHhcC
Confidence 9999997 69999999999999853
No 57
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.26 E-value=3.9e-10 Score=137.20 Aligned_cols=134 Identities=13% Similarity=0.183 Sum_probs=90.7
Q ss_pred cCCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcce-e-ecCCCC----------CCCCCcceeeecCc
Q 007568 309 LWPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWI-G-VNVDPS----------LPPEDVTFAVIPTF 373 (598)
Q Consensus 309 lwP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i-~-~~~~~~----------~~~~~~~~~l~~~~ 373 (598)
-+++++ .+.+|| ....++++++.+ +++++ +.||+||+.. . .+.... +.++..+. ..|+
T Consensus 896 ~~~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-p~~~- 968 (1146)
T PRK08633 896 MFASLR---LVVAGAEKLKPEVADAFEEKF-GIRIL-EGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGM-PLPG- 968 (1146)
T ss_pred cCCCee---eEEEcCCcCCHHHHHHHHHHh-CCCee-cccccccCcceEEEecCcccccccccccCCCCCCccc-cCCC-
Confidence 356788 445555 556667777777 58999 9999999642 2 221100 01111222 2222
Q ss_pred eEEEEEecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee-----------------ccccCCEEEE
Q 007568 374 SYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY-----------------RYRLGDVVEV 433 (598)
Q Consensus 374 ~~~EFip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-----------------RYr~GDvv~v 433 (598)
.-.+.++++ +++ ++.+|+.|||+|++. .|+| .|+|||++++
T Consensus 969 ~~v~i~d~~--------------~~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~ 1029 (1146)
T PRK08633 969 VAVRIVDPE--------------TFE-----ELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHL 1029 (1146)
T ss_pred CEEEEEcCC--------------CCc-----cCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEE
Confidence 233444422 122 356899999999653 4555 3999999999
Q ss_pred ccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 434 AGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 434 ~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+. ...+.|+||.+|+++++|++|++.+||+++.+.
T Consensus 1030 ~~----~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~ 1064 (1146)
T PRK08633 1030 DE----DGFLTITDRYSRFAKIGGEMVPLGAVEEELAKA 1064 (1146)
T ss_pred cC----CceEEEEecccchhhhCcEEECHHHHHHHHHhc
Confidence 85 788999999999999999999999999999865
No 58
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.26 E-value=1.7e-09 Score=121.70 Aligned_cols=132 Identities=19% Similarity=0.214 Sum_probs=88.3
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC---CCCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS---LPPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
.|+++ ++..|| .....+++++.+ +++++ +.||+||+...+..... ..+...+. ..| +.-++.++.+
T Consensus 324 ~~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~~~~- 395 (560)
T PRK08974 324 FSSLK---LSVGGGMAVQQAVAERWVKLT-GQYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGL-PVP-STEIKLVDDD- 395 (560)
T ss_pred cccee---EEEecCccCCHHHHHHHHHHh-CCcEE-eeecccccCceeeccCCCCcccCCcccc-CcC-CCEEEEECCC-
Confidence 35677 445555 344455666666 58999 99999997543322111 00111222 222 2334555422
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Cceec-------------cccCCEEEEccccCCCCEEEEEe
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLYR-------------YRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~R-------------Yr~GDvv~v~g~~~~~P~i~f~g 447 (598)
+. ++..|+.|||+|++. .|+|. |+|||+++.+. ...+.|+|
T Consensus 396 --------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~G 452 (560)
T PRK08974 396 --------------GN-----EVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDE----EGFLRIVD 452 (560)
T ss_pred --------------CC-----CCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcC----CceEEEEe
Confidence 22 355799999999653 55553 99999999974 67899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|.++++++.|+++++.+|+++|.+.
T Consensus 453 R~~d~i~~~G~~i~~~~IE~~l~~~ 477 (560)
T PRK08974 453 RKKDMILVSGFNVYPNEIEDVVMLH 477 (560)
T ss_pred cccceEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999754
No 59
>PRK12467 peptide synthase; Provisional
Probab=99.25 E-value=2.5e-10 Score=153.61 Aligned_cols=134 Identities=13% Similarity=0.154 Sum_probs=90.4
Q ss_pred cCCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC--CC-C----CCcceeeecCceEEEE
Q 007568 309 LWPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS--LP-P----EDVTFAVIPTFSYFEF 378 (598)
Q Consensus 309 lwP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~--~~-~----~~~~~~l~~~~~~~EF 378 (598)
-.|+|+. ++.|| .....+++.+.++++.++ +.||+||+.+.....+. .. + ...|. ..++..++
T Consensus 3349 ~~~~lr~---~~~gGe~~~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~-- 3421 (3956)
T PRK12467 3349 DCASLDI---YVFGGEAVPPAAFEQVKRKLKPRGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGR-PVAGRSIY-- 3421 (3956)
T ss_pred CCCCceE---EEEecCCCCHHHHHHHHHhCCCCEEE-eCcccchhEeeeEEEecccccccCCCCCCCcc-ccCCCEEE--
Confidence 3467884 45555 455566677777788899 99999998654321111 00 0 00112 22333221
Q ss_pred EecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec---------------------cccCCEEEEc
Q 007568 379 IPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR---------------------YRLGDVVEVA 434 (598)
Q Consensus 379 ip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R---------------------Yr~GDvv~v~ 434 (598)
-.++ +.++ +.+|+.|||.|.. ..|||. |||||++++.
T Consensus 3422 -v~d~-------------~~~~-----vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~ 3482 (3956)
T PRK12467 3422 -VLDG-------------QLNP-----VPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYR 3482 (3956)
T ss_pred -EECC-------------CCCC-----CCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheec
Confidence 1121 2333 4589999999955 356652 9999999998
Q ss_pred cccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 435 GFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 435 g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
. ...++|+||.|++++++|.+|...|||++|.+.
T Consensus 3483 ~----dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~ 3516 (3956)
T PRK12467 3483 A----DGVIEYLGRIDHQVKIRGFRIELGEIEARLLQH 3516 (3956)
T ss_pred C----CCcEEEeccccceEeeceEeecHHHHHHHHhhC
Confidence 5 789999999999999999999999999999864
No 60
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.25 E-value=1.6e-09 Score=122.01 Aligned_cols=131 Identities=16% Similarity=0.171 Sum_probs=87.8
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCC---CCCCcceeeecCceEEEEEecCCc
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSL---PPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
+.++ .+..|+ .....+++++.+ +++++ +.||+||+...+...+.. .+...+. .. .+.-.++++.+
T Consensus 327 ~~l~---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-p~-~g~~v~i~d~~-- 397 (557)
T PRK07059 327 SKLI---VANGGGMAVQRPVAERWLEMT-GCPIT-EGYGLSETSPVATCNPVDATEFSGTIGL-PL-PSTEVSIRDDD-- 397 (557)
T ss_pred hhhe---EEEeccccCCHHHHHHHHHHh-CCCee-eccccccccchhhcCCCCCCCcCCcccC-cc-CCcEEEEECCC--
Confidence 4566 445555 345556677777 58999 999999975433221111 1111222 11 23344555422
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee--------------ccccCCEEEEccccCCCCEEEEEe
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY--------------RYRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~g 447 (598)
+.. +.+|+.|||+|++. .|+| .|+|||+++.+. ...+.|+|
T Consensus 398 -------------~~~-----~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~G 455 (557)
T PRK07059 398 -------------GND-----LPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDE----RGYTKIVD 455 (557)
T ss_pred -------------CCC-----CCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcC----CCcEEEec
Confidence 233 45788999999763 3443 289999999875 67899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|.++++++.|++|++.+|+++|.+.
T Consensus 456 R~~~~i~~~G~~i~p~~iE~~l~~~ 480 (557)
T PRK07059 456 RKKDMILVSGFNVYPNEIEEVVASH 480 (557)
T ss_pred ccccceEECCEEEcHHHHHHHHHhC
Confidence 9999999999999999999999764
No 61
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.25 E-value=1.2e-09 Score=125.19 Aligned_cols=63 Identities=24% Similarity=0.224 Sum_probs=53.9
Q ss_pred CCCCCCeEEEEEcc---cCcee-------------------------------ccccCCEEEEccccCCCCEEEEEeecC
Q 007568 405 QVKLGQEYEIVLTS---FTGLY-------------------------------RYRLGDVVEVAGFHKGTPKLNFVCRRK 450 (598)
Q Consensus 405 eve~G~~yeLVvTt---~~Gl~-------------------------------RYr~GDvv~v~g~~~~~P~i~f~gR~~ 450 (598)
++..|+.|||+|.. ..||| .|+|||++++. ...+.|+||.+
T Consensus 412 ~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-----dG~l~i~GR~~ 486 (631)
T PRK07769 412 ELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-----DGELYITGRVK 486 (631)
T ss_pred CCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-----CCEEEEEcccc
Confidence 46789999999954 35554 38999999884 46899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 007568 451 LILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 451 ~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|+|+++|++|++.|||.+|.+.
T Consensus 487 d~Ik~~G~~V~p~eIE~~l~~~ 508 (631)
T PRK07769 487 DLVIIDGRNHYPQDLEYTAQEA 508 (631)
T ss_pred cEEEECCeeeCHHHHHHHHHhc
Confidence 9999999999999999999864
No 62
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.25 E-value=1.5e-09 Score=119.70 Aligned_cols=133 Identities=19% Similarity=0.218 Sum_probs=85.9
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCC--CCCCcceeeecCceEEEEEecCCc
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSL--PPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~--~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
.+++++ +.+|+ ....++++++.+ +++++ +.||+||+.+.+...... .++..+. ..++ .-..+++.+
T Consensus 240 l~~l~~---~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~vG~-~~~g-~~~~i~d~~-- 310 (471)
T PRK07787 240 LRGARL---LVSGSAALPVPVFDRLAALT-GHRPV-ERYGMTETLITLSTRADGERRPGWVGL-PLAG-VETRLVDED-- 310 (471)
T ss_pred ccceeE---EEECCCCCCHHHHHHHHHHc-CCCee-cccCccccCcceecCCCCcccCCcccc-cCCC-cEEEEECCC--
Confidence 356774 44454 456667777777 47899 999999986543211111 1111222 1222 233333321
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCC-eEEEEEccc---Ccee--------------ccccCCEEEEccccCCCCEEEEE
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQ-EYEIVLTSF---TGLY--------------RYRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~-~yeLVvTt~---~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~ 446 (598)
+.+++ ..|+ .|||+|++. .|+| .|+|||++.++. ...+.++
T Consensus 311 -------------~~~~~----~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~----dg~l~~~ 369 (471)
T PRK07787 311 -------------GGPVP----HDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDP----DGMHRIV 369 (471)
T ss_pred -------------CCCCC----CCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcC----CCCEEEe
Confidence 22222 1243 689999763 4555 399999999974 6789999
Q ss_pred eec-CceEeeceeecCHHHHHHHHHHH
Q 007568 447 CRR-KLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 447 gR~-~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
||. +++++++|++|++.+|+++|...
T Consensus 370 GR~~d~~i~~~G~~v~~~eIE~~l~~~ 396 (471)
T PRK07787 370 GRESTDLIKSGGYRIGAGEIETALLGH 396 (471)
T ss_pred CCCCceeEeeCCEEECHHHHHHHHHhC
Confidence 996 89999999999999999999853
No 63
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.25 E-value=1.5e-09 Score=125.01 Aligned_cols=152 Identities=14% Similarity=0.196 Sum_probs=93.1
Q ss_pred CCCeEEEEEccc-----Ccee------c------------cccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHH
Q 007568 408 LGQEYEIVLTSF-----TGLY------R------------YRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKD 464 (598)
Q Consensus 408 ~G~~yeLVvTt~-----~Gl~------R------------Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~ 464 (598)
+|+.|||+|+.. .|+| + |+|||+++++. ...+.|+||.||+|+++|++|++.|
T Consensus 461 ~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~----dG~l~i~GR~dd~I~~~G~ri~p~E 536 (652)
T TIGR01217 461 TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP----RGGIVIHGRSDSTLNPQGVRMGSAE 536 (652)
T ss_pred CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC----CCcEEEEecccCeEecCCEEcCHHH
Confidence 488999999652 3554 1 78999999985 6789999999999999999999999
Q ss_pred HHHHHHHHHhhhhccCCeeeeeEEe--eccCCCCceEEEEEEecCCC--ccchHHHHHHHHHhhcCCchhHhhhhcCCcC
Q 007568 465 LQLVVDRGSQLLNKTGAELVDFTSH--ADIVNQPGHYIIYWEIKGDV--EEGVLNQCCHEMDVSFVDPGYVVSRRTNSIG 540 (598)
Q Consensus 465 v~~av~~~~~~l~~~g~~l~~f~~~--~~~~~~~~~Y~~~vE~~~~~--~~~~l~~~~~~ld~~l~n~~Y~~~R~~g~l~ 540 (598)
||++|.+... +.+-.|+ ++.. ..-.-+.||.+..+. +.+..+++.+.+.+.| ...-.
T Consensus 537 IE~~l~~~p~--------V~eaavvg~~~~~-~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l----------~~~~~ 597 (652)
T TIGR01217 537 IYNAVERLDE--------VRESLCIGQEQPD-GGYRVVLFVHLAPGATLDDALLDRIKRTIRAGL----------SPRHV 597 (652)
T ss_pred HHHHHHhCCC--------cceEEEEeeecCC-CCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhC----------CCCcC
Confidence 9999986422 2233332 2211 112334667664332 2222233333333333 11234
Q ss_pred CeEEEEec------cch-HHHHHHHHhcCCCCCCCCCCCcccCCHHHHHHHhh
Q 007568 541 PLELCIVK------RGA-FRMILDYFVGNGAALSQFKTPRCTSNQVLVRILND 586 (598)
Q Consensus 541 p~~v~~v~------~g~-f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 586 (598)
|-+|.+|+ .|- ..+.++. +..|. .++.+--+.|++.++.+.+
T Consensus 598 P~~i~~v~~lP~T~sGKi~r~~Lr~-~~~~~---~~~~~~~~~~~~~l~~~~~ 646 (652)
T TIGR01217 598 PDEIIEVPGIPHTLTGKRVEVAVKR-VLQGT---PVDNPGAIDNPELLDLYEE 646 (652)
T ss_pred CCEEEECCCCCCCCCccChHHHHHH-HHcCC---CCCCcccccCHHHHHHHHH
Confidence 55566653 222 2222222 23343 4677888999999998865
No 64
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.24 E-value=1.3e-09 Score=122.02 Aligned_cols=132 Identities=11% Similarity=0.118 Sum_probs=87.4
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCC----CCCcceeeecCceEEEEEecC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLP----PEDVTFAVIPTFSYFEFIPIH 382 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~----~~~~~~~l~~~~~~~EFip~~ 382 (598)
.|+++. +.+|| .....+++++.+ +++++ +.||+||+.......+... ....+. ..++ .-++.++.+
T Consensus 309 ~~~l~~---~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~g-~~v~i~~~~ 381 (538)
T TIGR03208 309 VPSLFT---FLCAGAPIPGILVERAWELL-GALIV-SAWGMTENGAVTVTEPDDALEKASTTDGR-PLPG-VEVKVIDAN 381 (538)
T ss_pred CCcceE---EEEcCCCCCHHHHHHHHHHc-CCeEE-eeeccCcCCCccccCcccchhhccCcccc-cCCC-CEEEEECCC
Confidence 467784 44444 445556666667 48888 9999999743221111110 001122 2222 333444311
Q ss_pred CcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee------------ccccCCEEEEccccCCCCEEEEEe
Q 007568 383 RRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY------------RYRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~------------RYr~GDvv~v~g~~~~~P~i~f~g 447 (598)
+.. +..|+.|||+|++. .|+| .|+|||+++++. ...+.|+|
T Consensus 382 ---------------~~~-----~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~g 437 (538)
T TIGR03208 382 ---------------GAK-----LSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDA----EGYIRING 437 (538)
T ss_pred ---------------CCC-----CcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECC----CCcEEEEe
Confidence 222 45799999999664 5666 399999999975 67899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|.+++++++|++|.+.+||.+|.+.
T Consensus 438 R~~~~i~~~G~~v~p~eIE~~l~~~ 462 (538)
T TIGR03208 438 RSKDVIIRGGENIPVVEIENLLYQH 462 (538)
T ss_pred ccCceEEECCEEECHHHHHHHHhcC
Confidence 9999999999999999999999753
No 65
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.24 E-value=1.3e-09 Score=121.75 Aligned_cols=133 Identities=16% Similarity=0.144 Sum_probs=86.0
Q ss_pred cCCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCC-C---------CCCCCcceeeecCceE
Q 007568 309 LWPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDP-S---------LPPEDVTFAVIPTFSY 375 (598)
Q Consensus 309 lwP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~-~---------~~~~~~~~~l~~~~~~ 375 (598)
..+++++ +..|| ......++.+.+| .++. +.||+||+...+...+ . ...+..+. ..++ .-
T Consensus 278 ~~~~lr~---~~~gG~~l~~~~~~~~~~~~g-~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~g-~~ 350 (528)
T PRK07470 278 DHSSLRY---VIYAGAPMYRADQKRALAKLG-KVLV-QYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGF-ERTG-ME 350 (528)
T ss_pred CCcceEE---EEEcCCCCCHHHHHHHHHHhC-cHHH-HhCCCcccCCceeecchhhccccccccceeeccCc-ccCC-cE
Confidence 3567884 34444 3455556666674 6788 9999999643221111 0 00001111 1112 22
Q ss_pred EEEEecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Cceec-------------cccCCEEEEccccCC
Q 007568 376 FEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLYR-------------YRLGDVVEVAGFHKG 439 (598)
Q Consensus 376 ~EFip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~R-------------Yr~GDvv~v~g~~~~ 439 (598)
++.++. ++. ++..|+.+||+|++. .|+|. |+|||+++++.
T Consensus 351 ~~i~d~---------------~~~-----~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~---- 406 (528)
T PRK07470 351 VQIQDD---------------EGR-----ELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDA---- 406 (528)
T ss_pred EEEECC---------------CCC-----CCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEcc----
Confidence 333331 122 245799999999653 55653 99999999985
Q ss_pred CCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 440 TPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 440 ~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
...+.+.||.++++++.|++|++.+||.+|.+.
T Consensus 407 ~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~ 439 (528)
T PRK07470 407 RGFLYITGRASDMYISGGSNVYPREIEEKLLTH 439 (528)
T ss_pred CCeEEEeCCccceEEeCCEEECHHHHHHHHHhC
Confidence 678999999999999999999999999999853
No 66
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.23 E-value=8.9e-10 Score=128.30 Aligned_cols=45 Identities=13% Similarity=0.089 Sum_probs=41.1
Q ss_pred ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 424 RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 424 RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.|+|||+++++. ...+.|+||.+|++++.|++|++.+||+++.+.
T Consensus 592 w~~TGDlg~~d~----dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 592 WYDTGDIVRFDE----QGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred eEecCCEEEEcC----CCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 389999999985 678999999999999999999999999998764
No 67
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.22 E-value=2.1e-09 Score=119.76 Aligned_cols=132 Identities=18% Similarity=0.169 Sum_probs=88.6
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCC---CCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSL---PPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~---~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
+|+++ .+++|| ....++++++.+| ++++ +.||+||+.......+.. .++..+. ..| +.-+++++.+
T Consensus 291 ~~~lr---~i~~gG~~l~~~~~~~~~~~~g-~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~d~~- 362 (516)
T PRK13383 291 LPQLR---VVMSSGDRLDPTLGQRFMDTYG-DILY-NGYGSTEVGIGALATPADLRDAPETVGK-PVA-GCPVRILDRN- 362 (516)
T ss_pred CCceE---EEEECCCCCCHHHHHHHHHHcC-chhh-hcccccccccceeccccccccCCCcccC-CCC-CcEEEEECCC-
Confidence 46777 444444 5566677788784 7888 999999975432211110 0111121 122 2234555422
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee----------ccccCCEEEEccccCCCCEEEEEeecC
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY----------RYRLGDVVEVAGFHKGTPKLNFVCRRK 450 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~----------RYr~GDvv~v~g~~~~~P~i~f~gR~~ 450 (598)
++. +.+|+.|||+|++. .|++ .|+|||+++.+. ...+.++||.+
T Consensus 363 --------------~~~-----~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~----~G~l~i~GR~~ 419 (516)
T PRK13383 363 --------------NRP-----VGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDN----AGRLFIVGRED 419 (516)
T ss_pred --------------CCC-----CCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcC----CccEEEecccc
Confidence 222 45789999999753 4555 477999999985 67899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 007568 451 LILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 451 ~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+++++.|++|++.+|+.+|.+.
T Consensus 420 ~~i~~~G~~v~~~eiE~~l~~~ 441 (516)
T PRK13383 420 DMIISGGENVYPRAVENALAAH 441 (516)
T ss_pred ceEEECCEEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 68
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.22 E-value=2.5e-10 Score=141.95 Aligned_cols=137 Identities=14% Similarity=0.132 Sum_probs=88.3
Q ss_pred cCCCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcceeecCC---CCCCC-C---------CcceeeecCc
Q 007568 309 LWPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVD---PSLPP-E---------DVTFAVIPTF 373 (598)
Q Consensus 309 lwP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~---~~~~~-~---------~~~~~l~~~~ 373 (598)
.+|.|+.+ +..|. ......++++++++++++ +.||+||+.+..... ..... . ..|. ..++.
T Consensus 527 ~~~~lr~~--~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~~ 602 (1389)
T TIGR03443 527 PIPSLHHA--FFVGDILTKRDCLRLQTLAENVCIV-NMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGK-GMKNV 602 (1389)
T ss_pred cCCCccEE--EEecccCCHHHHHHHHHhCCCCEEE-ECccCCccceeEEEEEccccccccchhhcccCcCcCCC-ccCCC
Confidence 35778843 33443 445566677777789999 999999985433211 10000 0 0011 11111
Q ss_pred eEEEEEecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee---------------------------
Q 007568 374 SYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY--------------------------- 423 (598)
Q Consensus 374 ~~~EFip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------------------- 423 (598)
.+ -.++.+ .... .+.+|+.|||+|.. ..|||
T Consensus 603 ~~-~ivd~~-------------~~~~-----~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~ 663 (1389)
T TIGR03443 603 QL-LVVNRN-------------DRTQ-----TCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKE 663 (1389)
T ss_pred EE-EEECCc-------------cCCC-----cCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccc
Confidence 11 111111 1112 24579999999944 35665
Q ss_pred ---------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 424 ---------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 424 ---------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.|+|||+++... ...+.|+||.||+++++|++|.+.+||.+|.+.
T Consensus 664 ~~~~~~~~~~~~~~~~y~TGDlg~~~~----dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~ 723 (1389)
T TIGR03443 664 NNKPEREFWLGPRDRLYRTGDLGRYLP----DGNVECCGRADDQVKIRGFRIELGEIDTHLSQH 723 (1389)
T ss_pred cccccccccCCCccceeecCCceeEcC----CCCEEEecccCCEEEeCcEEecHHHHHHHHHhC
Confidence 399999999985 678999999999999999999999999999864
No 69
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.22 E-value=8.9e-09 Score=116.18 Aligned_cols=130 Identities=18% Similarity=0.277 Sum_probs=86.7
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC---CCCCCcceeeecCceEEEEEecCCc
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS---LPPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~---~~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
+++++ +.+|| ....++++++.+ +++++ ..||+||+.......+. ..++..+. ..++ .-++.+++
T Consensus 333 ~~lr~---~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~~-~~v~ivd~--- 402 (562)
T PRK12492 333 SALKL---TNSGGTALVKATAERWEQLT-GCTIV-EGYGLTETSPVASTNPYGELARLGTVGI-PVPG-TALKVIDD--- 402 (562)
T ss_pred cceeE---EEeccccCCHHHHHHHHHHh-CCcee-eccCccccCceeeecCCcccccCCccce-ecCC-CEEEEECC---
Confidence 46774 34444 445556677767 58999 99999997432211111 01111222 2222 22344432
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee--------------ccccCCEEEEccccCCCCEEEEEe
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY--------------RYRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~g 447 (598)
++.. +.+|+.|||+|++ ..|+| .|+|||+++++. ...+.|+|
T Consensus 403 ------------~~~~-----~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~----~G~l~i~G 461 (562)
T PRK12492 403 ------------DGNE-----LPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP----DGFVRIVD 461 (562)
T ss_pred ------------CCCC-----CCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC----CCeEEEec
Confidence 1333 4579999999976 34555 299999999985 67899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDR 471 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~ 471 (598)
|.++++++.|++|++.+|+.++.+
T Consensus 462 R~~~~i~~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 462 RKKDLIIVSGFNVYPNEIEDVVMA 485 (562)
T ss_pred ccCCeEEECCEEECHHHHHHHHHh
Confidence 999999999999999999999975
No 70
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.22 E-value=2.6e-09 Score=119.38 Aligned_cols=133 Identities=14% Similarity=0.157 Sum_probs=87.7
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCC---CCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSL---PPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~---~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
.++++ .+.+|| .....+++++.+ +++++ +.||+||+.+........ .....+..+ +.+...+.++.
T Consensus 298 ~~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~v~i~d~-- 369 (527)
T TIGR02275 298 LSSLK---LLQVGGAKFSEAAARRVPAVF-GCQLQ-QVFGMAEGLVNYTRLDDPAEIIFTTQGRPM-SPDDEVRVVDD-- 369 (527)
T ss_pred ccceE---EEEEcCCCCCHHHHHHHHHHh-CCeEE-eeeccCccCccccCCCCccccccccCCCCC-CCCceEEEECC--
Confidence 35677 455555 555666677777 58998 999999975432210100 001122222 11223333331
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec--------------cccCCEEEEccccCCCCEEEEE
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR--------------YRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~ 446 (598)
++++ +.+|+.+||+|+. ..|+|. |+|||+++++. ...+.++
T Consensus 370 -------------~g~~-----~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~~~ 427 (527)
T TIGR02275 370 -------------HGNP-----VAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTP----EGYIVVV 427 (527)
T ss_pred -------------CCCC-----CCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcC----CccEEEE
Confidence 1233 4579999999964 355552 99999999974 6789999
Q ss_pred eecCceEeeceeecCHHHHHHHHHHH
Q 007568 447 CRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 447 gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
||.+|+++++|++|++.+|+++|.+.
T Consensus 428 gR~~d~i~~~G~~v~~~eiE~~l~~~ 453 (527)
T TIGR02275 428 GRAKDQINRGGEKIAAEEIENLLLAH 453 (527)
T ss_pred ecccceeecCCEEECHHHHHHHHHhC
Confidence 99999999999999999999999854
No 71
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.21 E-value=2e-10 Score=133.32 Aligned_cols=134 Identities=16% Similarity=0.202 Sum_probs=84.1
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCC-CC-CCCCCcceeeecCceEEEEEecCCcc
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVD-PS-LPPEDVTFAVIPTFSYFEFIPIHRRK 385 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~-~~-~~~~~~~~~l~~~~~~~EFip~~~~~ 385 (598)
++++ .+.+|| .....+.++..+ +++++ .+||+||+..+.... +. ...+..|. ..| +.-+..++.++.
T Consensus 420 ~~lr---~i~~GGapl~~~~~~~~~~~~-g~~v~-~~YG~TEt~~~~~~~~~~~~~~gsvG~-p~p-~~evkivd~~~~- 491 (696)
T PLN02387 420 GRIR---FMLSGGAPLSGDTQRFINICL-GAPIG-QGYGLTETCAGATFSEWDDTSVGRVGP-PLP-CCYVKLVSWEEG- 491 (696)
T ss_pred CcEE---EEEEcCCCCCHHHHHHHHHHc-CCCee-EeechhhcccceeecCcccCCCCccCC-CCC-ceEEEEeecccc-
Confidence 4677 445565 233333344456 58999 999999975332211 11 11122222 122 234455543321
Q ss_pred cCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee------------------ccccCCEEEEccccCCCCEEE
Q 007568 386 QDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY------------------RYRLGDVVEVAGFHKGTPKLN 444 (598)
Q Consensus 386 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~------------------RYr~GDvv~v~g~~~~~P~i~ 444 (598)
+..+. -.++..|||+|.. +.|+| .|+|||+++++. ...+.
T Consensus 492 ------------~~~~~---~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~----dG~l~ 552 (696)
T PLN02387 492 ------------GYLIS---DKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHP----DGCLE 552 (696)
T ss_pred ------------CcccC---CCCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECC----CCcEE
Confidence 11111 1234467999944 57776 488999999985 77899
Q ss_pred EEeecCceEee-ceeecCHHHHHHHHHH
Q 007568 445 FVCRRKLILTV-NIDKNTEKDLQLVVDR 471 (598)
Q Consensus 445 f~gR~~~~l~~-~Gekv~e~~v~~av~~ 471 (598)
|+||.+|++++ .||+|++.+||+++.+
T Consensus 553 i~gR~kd~ik~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 553 IIDRKKDIVKLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred EEEcccceEECCCCeEEchHHHHHHHhc
Confidence 99999999998 5999999999999875
No 72
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.21 E-value=3.2e-09 Score=120.79 Aligned_cols=144 Identities=12% Similarity=0.097 Sum_probs=86.3
Q ss_pred CCCCceeEEEEccC-hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCCCCCcceeeec---CceEEEEEecCCcc
Q 007568 310 WPNAKYVYSIMTGS-MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIP---TFSYFEFIPIHRRK 385 (598)
Q Consensus 310 wP~l~~i~~~~~g~-~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~---~~~~~EFip~~~~~ 385 (598)
.+++++ +.+++ .....+++.+.+|...++ +.||+||+.+.+.. ....++..+..... ...+..+-+ +. +
T Consensus 313 ~~~l~~---~~g~~l~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~ 385 (600)
T PRK08279 313 DHRLRL---MIGNGLRPDIWDEFQQRFGIPRIL-EFYAASEGNVGFIN-VFNFDGTVGRVPLWLAHPYAIVKYDV-DT-G 385 (600)
T ss_pred CcceeE---EecCCCCHHHHHHHHHHhCcceee-eeecccccceeecc-cCCCCcccccccccccccceeeeecc-Cc-C
Confidence 456663 33333 556667788888655578 99999998654321 11111112221110 122221111 10 0
Q ss_pred cCCCCCCCCCCCCccccCCCCCCCCeEEEEEc-----ccCcee-------------------ccccCCEEEEccccCCCC
Q 007568 386 QDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLT-----SFTGLY-------------------RYRLGDVVEVAGFHKGTP 441 (598)
Q Consensus 386 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvT-----t~~Gl~-------------------RYr~GDvv~v~g~~~~~P 441 (598)
.. + ....-.+.++.+|+.+||++. .+.|+. -|+|||+++++. ..
T Consensus 386 ~~----i----~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~----dG 453 (600)
T PRK08279 386 EP----V----RDADGRCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDG----FG 453 (600)
T ss_pred ce----e----eCCCCccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcC----Cc
Confidence 00 0 000011234678999999842 223331 289999999985 67
Q ss_pred EEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 442 KLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 442 ~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.+.|.||.+|+++++|++|++.+||++|.+.
T Consensus 454 ~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~ 484 (600)
T PRK08279 454 HAQFVDRLGDTFRWKGENVATTEVENALSGF 484 (600)
T ss_pred cEEEecccCCeEEECCcccCHHHHHHHHhcC
Confidence 8999999999999999999999999999863
No 73
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.21 E-value=2.1e-09 Score=121.03 Aligned_cols=132 Identities=17% Similarity=0.230 Sum_probs=87.7
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCC---CCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLP---PEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~---~~~~~~~l~~~~~~~EFip~~~ 383 (598)
+++++. +.+|| .....+++++.+ +++++ +.||+||+...+...+... ++..+. ..+ +.-...++.
T Consensus 328 l~~lr~---v~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~-~~~v~i~d~-- 398 (560)
T PRK08751 328 FSSLKM---TLGGGMAVQRSVAERWKQVT-GLTLV-EAYGLTETSPAACINPLTLKEYNGSIGL-PIP-STDACIKDD-- 398 (560)
T ss_pred hhhhee---eeeCCCCCCHHHHHHHHHHh-CCeEE-EeeccccCCCceecccccccccCCCcCc-cCC-CceEEEECC--
Confidence 456774 45454 445556777777 57888 9999999754433222110 111121 122 222233331
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Cceec--------------cccCCEEEEccccCCCCEEEEE
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLYR--------------YRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~ 446 (598)
++.. +..|+.|||+|++. .|+|. |+|||+++++. ...+.++
T Consensus 399 -------------~~~~-----~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~ 456 (560)
T PRK08751 399 -------------AGTV-----LAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDE----QGFVYIV 456 (560)
T ss_pred -------------CCCC-----CCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcC----CceEEEE
Confidence 1232 45788999999663 45542 89999999975 6789999
Q ss_pred eecCceEeeceeecCHHHHHHHHHHH
Q 007568 447 CRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 447 gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
||.+|++++.|++|++.+||++|.+.
T Consensus 457 GR~~d~i~~~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 457 DRKKDMILVSGFNVYPNEIEDVIAMM 482 (560)
T ss_pred eechhheeECCEEEcHHHHHHHHHhC
Confidence 99999999999999999999999764
No 74
>PRK08315 AMP-binding domain protein; Validated
Probab=99.21 E-value=3.4e-09 Score=119.06 Aligned_cols=135 Identities=16% Similarity=0.169 Sum_probs=87.8
Q ss_pred CCCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCC-----CCCcceeeecCceEEEEEecC
Q 007568 310 WPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLP-----PEDVTFAVIPTFSYFEFIPIH 382 (598)
Q Consensus 310 wP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~-----~~~~~~~l~~~~~~~EFip~~ 382 (598)
.|+++.+ +..|+ .....+.+.+.++..+++ +.||+||+..........+ +...+. ..+ +.-++.++.+
T Consensus 314 ~~~lr~~--~~~G~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~-~~~v~i~d~~ 388 (559)
T PRK08315 314 LSSLRTG--IMAGSPCPIEVMKRVIDKMHMSEVT-IAYGMTETSPVSTQTRTDDPLEKRVTTVGR-ALP-HLEVKIVDPE 388 (559)
T ss_pred chhhhee--EecCCCCCHHHHHHHHHHcCCccee-EEEcccccccceeecCcccchhhccCCCCc-cCC-CcEEEEEcCc
Confidence 4567742 23333 445566677777655688 9999999854322111100 111222 222 2334444422
Q ss_pred CcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee--------------ccccCCEEEEccccCCCCEEEE
Q 007568 383 RRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY--------------RYRLGDVVEVAGFHKGTPKLNF 445 (598)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f 445 (598)
+++. +..|+.|||+|... .|+| .|+|||+++... ...+.|
T Consensus 389 --------------~~~~-----~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~ 445 (559)
T PRK08315 389 --------------TGET-----VPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDE----EGYVNI 445 (559)
T ss_pred --------------cCCc-----CCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcC----CceEEE
Confidence 1333 45799999999553 4444 499999999874 678999
Q ss_pred EeecCceEeeceeecCHHHHHHHHHHH
Q 007568 446 VCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 446 ~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+||.++++++.|++|+..+|++++.+.
T Consensus 446 ~GR~d~~i~~~G~~v~~~eIE~~l~~~ 472 (559)
T PRK08315 446 VGRIKDMIIRGGENIYPREIEEFLYTH 472 (559)
T ss_pred EeeccceEEECCEEEcHHHHHHHHHhC
Confidence 999999999999999999999999854
No 75
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.20 E-value=1.6e-10 Score=130.53 Aligned_cols=133 Identities=22% Similarity=0.389 Sum_probs=92.6
Q ss_pred CCceeEEEEccChH--HHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCCCCCcceeeecCceEEEEEecCCcccCCC
Q 007568 312 NAKYVYSIMTGSMQ--HYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCN 389 (598)
Q Consensus 312 ~l~~i~~~~~g~~~--~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~ 389 (598)
++++ ..+||.+ +....+=+.. |+++. .+||+||...++.+++.. .|.+ +
T Consensus 354 ri~~---~~sGGa~l~~~~~~f~~~l-Gi~i~-eGYGlTEts~~~~v~~~~----------------~~~~-g------- 404 (613)
T COG1022 354 RIRY---ALSGGAPLSPELLHFFRSL-GIPIL-EGYGLTETSAVVSVNPPD----------------RFVL-G------- 404 (613)
T ss_pred cEEE---EEecCCcCCHHHHHHHHHc-CCCeE-EEecccccccceEEcccc----------------Cccc-C-------
Confidence 5663 4556533 3322222334 59999 999999976655433211 0111 1
Q ss_pred CCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec--------------cccCCEEEEccccCCCCEEEEEeecCce
Q 007568 390 SAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR--------------YRLGDVVEVAGFHKGTPKLNFVCRRKLI 452 (598)
Q Consensus 390 ~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~gR~~~~ 452 (598)
.-+.+++--|++.++.+||.|-+ +.|||. |+|||++.++. ...+.++||.+++
T Consensus 405 ------tvG~p~p~~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~----~g~L~i~gRkK~~ 474 (613)
T COG1022 405 ------TVGKPLPGIEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDE----DGYLVITGRKKEL 474 (613)
T ss_pred ------CcCCcCCCceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcC----CCcEEEeecccce
Confidence 23667777788889999999954 689996 99999999996 6899999999999
Q ss_pred Eee-ceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeec
Q 007568 453 LTV-NIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHAD 491 (598)
Q Consensus 453 l~~-~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~ 491 (598)
+++ +||+|.+..||..+.+. --+...+++.+
T Consensus 475 i~l~~GknIaP~~IE~~l~~~--------~~I~qi~vvg~ 506 (613)
T COG1022 475 IKLSNGKNIAPEPIESKLAKS--------PLIEQICVVGD 506 (613)
T ss_pred EECCCCcccChHHHHHHHhcC--------CCeeEEEEEec
Confidence 765 58999999999977642 22445666654
No 76
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.20 E-value=2.3e-09 Score=120.38 Aligned_cols=123 Identities=18% Similarity=0.240 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHhCCCCeecCcccCCCcc-eeecCC-CCC-----CCCCcceeeecCceEEEEEecCCcccCCCCCCCCCC
Q 007568 324 MQHYLKKLRHYAGDLPLVSADYGSTESW-IGVNVD-PSL-----PPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFI 396 (598)
Q Consensus 324 ~~~y~~~l~~~~g~~~i~~~~ygaSE~~-i~~~~~-~~~-----~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~ 396 (598)
....++++++.+++++++ +.||+||+. +++... +.. .....+. ..|+ .-.++++.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~-~~~~-~~v~i~d~~-------------- 378 (546)
T PLN02330 316 APELLTAFEAKFPGVQVQ-EAYGLTEHSCITLTHGDPEKGHGIAKKNSVGF-ILPN-LEVKFIDPD-------------- 378 (546)
T ss_pred CHHHHHHHHHHcCCCeEE-ecccccccccceecCCCccccccccccCcccc-ccCC-cEEEEEeCC--------------
Confidence 556677788888789999 999999974 332211 110 0001122 1122 223444422
Q ss_pred CCccccCCCCCCCCeEEEEEcc---cCcee--------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceee
Q 007568 397 EDEPVPLSQVKLGQEYEIVLTS---FTGLY--------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDK 459 (598)
Q Consensus 397 ~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gek 459 (598)
++.. +.+|+.|||+|+. ..|+| .|+|||++++.. ...+.|.||.++++++.|++
T Consensus 379 ~~~~-----~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----dG~l~~~GR~~d~i~~~G~~ 449 (546)
T PLN02330 379 TGRS-----LPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDD----DGDIFIVDRIKELIKYKGFQ 449 (546)
T ss_pred CCcc-----CCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeC----CCcEEEEechHHhhhcCCEE
Confidence 1222 4579999999964 34554 299999999985 56899999999999999999
Q ss_pred cCHHHHHHHHHHH
Q 007568 460 NTEKDLQLVVDRG 472 (598)
Q Consensus 460 v~e~~v~~av~~~ 472 (598)
|++.+|+.+|.+.
T Consensus 450 v~~~~iE~~l~~~ 462 (546)
T PLN02330 450 VAPAELEAILLTH 462 (546)
T ss_pred ECHHHHHHHHHhC
Confidence 9999999999754
No 77
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.20 E-value=3e-09 Score=118.52 Aligned_cols=133 Identities=15% Similarity=0.136 Sum_probs=91.4
Q ss_pred ccCCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcce-eecCCCCCCCCCcceeeecCceEEEEEecCC
Q 007568 308 KLWPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWI-GVNVDPSLPPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 308 ~lwP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i-~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
.-.+.|++ +.+.| -++-...+.+.+| ++|. +.||.||... .+...+...++..+. ..|. .-.+.++.+
T Consensus 287 ~dlssLr~---~~SaGEPLnpe~~~w~~~~~g-~~i~-d~~gqTEtg~~~~~~~~~~~~g~~g~-p~pG-~~~~vvdd~- 358 (528)
T COG0365 287 YDLSSLRV---LGSAGEPLNPEAFEWFYSALG-VWIL-DIYGQTETGMGFIAGRPPVKNGSSGL-PLPG-YAVRRVDDE- 358 (528)
T ss_pred ccchhhee---eeccCCCCCHHHHHHHHHHhC-CCEe-ccccccccCccccCCCCCcCCCCCCC-CCCC-ceeEEECCC-
Confidence 34567884 44444 5555566777785 9999 9999999762 221111001222222 3333 334555422
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc-----Cceec-------------cccCCEEEEccccCCCCEEEE
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF-----TGLYR-------------YRLGDVVEVAGFHKGTPKLNF 445 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~-----~Gl~R-------------Yr~GDvv~v~g~~~~~P~i~f 445 (598)
++. +.+|+ ++|+|... .|+|+ |.|||.+..+. ...+.|
T Consensus 359 --------------g~~-----~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~De----dGy~~i 414 (528)
T COG0365 359 --------------GNP-----VPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDE----DGYFWL 414 (528)
T ss_pred --------------CCc-----CCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEcc----CCCEEE
Confidence 333 44688 99999753 45775 99999999995 789999
Q ss_pred EeecCceEeeceeecCHHHHHHHHHHH
Q 007568 446 VCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 446 ~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+||.||+||+.|.+|...|||++|.+.
T Consensus 415 ~GR~DDvI~vsG~Rig~~EvE~~l~~h 441 (528)
T COG0365 415 HGRSDDVIKVSGKRIGPLEIESVLLAH 441 (528)
T ss_pred EeeccceEeccCeeccHHHHHHHHHhC
Confidence 999999999999999999999999865
No 78
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.20 E-value=9.8e-11 Score=135.10 Aligned_cols=60 Identities=22% Similarity=0.282 Sum_probs=52.3
Q ss_pred CCCeEEEEEc---ccCceec-------------cccCCEEEEccccCCCCEEEEEeecCceEee-ceeecCHHHHHHHHH
Q 007568 408 LGQEYEIVLT---SFTGLYR-------------YRLGDVVEVAGFHKGTPKLNFVCRRKLILTV-NIDKNTEKDLQLVVD 470 (598)
Q Consensus 408 ~G~~yeLVvT---t~~Gl~R-------------Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~-~Gekv~e~~v~~av~ 470 (598)
+|..|||.|. .+.|+|. |+|||+++++. ...+.|+||.||++++ +||+|++.+||+++.
T Consensus 462 ~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~ 537 (660)
T PLN02861 462 DVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQP----NGAMKIIDRKKNIFKLSQGEYVAVENLENTYS 537 (660)
T ss_pred CCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECC----CCcEEEEeccccceEcCCCeEEcHHHHHHHHh
Confidence 4567899994 3678884 99999999985 6889999999999997 799999999999987
Q ss_pred H
Q 007568 471 R 471 (598)
Q Consensus 471 ~ 471 (598)
+
T Consensus 538 ~ 538 (660)
T PLN02861 538 R 538 (660)
T ss_pred c
Confidence 5
No 79
>PRK12467 peptide synthase; Provisional
Probab=99.19 E-value=6.5e-10 Score=149.74 Aligned_cols=133 Identities=16% Similarity=0.218 Sum_probs=88.3
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCC---CCCC---CCcceeeecCceEEEEEe
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDP---SLPP---EDVTFAVIPTFSYFEFIP 380 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~---~~~~---~~~~~~l~~~~~~~EFip 380 (598)
.+++++ ++.|| .....+++.+.+++++++ +.||+||+.+.+.... .... ...|. ..++..+ ..++
T Consensus 770 ~~~lr~---i~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~-~i~d 843 (3956)
T PRK12467 770 PRPQRA---LVCGGEALQVDLLARVRALGPGARLI-NHYGPTETTVGVSTYELSDEERDFGNVPIGQ-PLANLGL-YILD 843 (3956)
T ss_pred CCcccE---EEEEeecCCHHHHHHHHHhCCCCEEE-eCcCCChhhhheeeEecccccccCCCCcccC-CcCCCEE-EEEC
Confidence 345674 44444 455566677767778999 9999999854332111 1000 00111 2233322 2222
Q ss_pred cCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Cceec---------------------cccCCEEEEccc
Q 007568 381 IHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLYR---------------------YRLGDVVEVAGF 436 (598)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~R---------------------Yr~GDvv~v~g~ 436 (598)
+ +.+. +.+|+.|||+|+.. .|||+ |||||+++...
T Consensus 844 --~-------------~~~~-----vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~- 902 (3956)
T PRK12467 844 --H-------------YLNP-----VPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRA- 902 (3956)
T ss_pred --C-------------CCCC-----CCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcC-
Confidence 1 1233 55899999999653 45552 99999999975
Q ss_pred cCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 437 HKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 437 ~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
...++|+||.|++++++|++|...+||.+|.+.
T Consensus 903 ---dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~~ 935 (3956)
T PRK12467 903 ---DGVIEYLGRMDHQVKIRGFRIELGEIEARLLAQ 935 (3956)
T ss_pred ---CCcEEEeccccCeEEECCEecCHHHHHHHHHhC
Confidence 678999999999999999999999999999864
No 80
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.19 E-value=8.9e-10 Score=123.59 Aligned_cols=131 Identities=15% Similarity=0.196 Sum_probs=84.5
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCC-CCC---CCCcceeeecCceEEEEEecC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDP-SLP---PEDVTFAVIPTFSYFEFIPIH 382 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~-~~~---~~~~~~~l~~~~~~~EFip~~ 382 (598)
.|++++ +.+|| .....+.+.++ +++++ +.||+||+........ .+. ....+. .. .+..++.++.+
T Consensus 301 ~~~lr~---i~~gG~~~~~~~~~~~~~~--~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~-~~~~~~i~d~~ 372 (547)
T PRK06087 301 LSALRF---FLCGGTTIPKKVARECQQR--GIKLL-SVYGSTESSPHAVVNLDDPLSRFMHTDGY-AA-AGVEIKVVDEA 372 (547)
T ss_pred CCCeEE---EEEcCCCCCHHHHHHHHHc--CCcEE-EEecccccCCccccCCCcchhhcCCcCCc-cC-CCceEEEEcCC
Confidence 356774 34444 44444555543 68999 9999999743221111 110 001111 11 23444554411
Q ss_pred CcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee--------------ccccCCEEEEccccCCCCEEEE
Q 007568 383 RRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY--------------RYRLGDVVEVAGFHKGTPKLNF 445 (598)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f 445 (598)
+. ++..|+.+||+|.+ ..|+| .|+|||+++++. .+.+.|
T Consensus 373 ---------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i 428 (547)
T PRK06087 373 ---------------RK-----TLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDE----AGYIKI 428 (547)
T ss_pred ---------------CC-----CCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECC----CCCEEE
Confidence 22 25679999999944 24443 389999999975 678999
Q ss_pred EeecCceEeeceeecCHHHHHHHHHHH
Q 007568 446 VCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 446 ~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+||.+|++++.|++|++.+|+++|.+.
T Consensus 429 ~GR~~d~i~~~G~~v~p~~iE~~l~~~ 455 (547)
T PRK06087 429 TGRKKDIIVRGGENISSREVEDILLQH 455 (547)
T ss_pred EecchhhhhcCCEEECHHHHHHHHHhC
Confidence 999999999999999999999999753
No 81
>PRK12316 peptide synthase; Provisional
Probab=99.18 E-value=1.2e-09 Score=149.66 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=87.6
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecC---CCCCCCC----CcceeeecCceEEEEE
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNV---DPSLPPE----DVTFAVIPTFSYFEFI 379 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~---~~~~~~~----~~~~~l~~~~~~~EFi 379 (598)
.|+|+ .++.|| .....+++.+.++++.++ +.||+||+.+.... .+..+.+ ..|. ..++... -.+
T Consensus 2260 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~-~i~ 2333 (5163)
T PRK12316 2260 PPAVR---VYCFGGEAVPAASLRLAWEALRPVYLF-NGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGR-ALGNRRA-YIL 2333 (5163)
T ss_pred Cccee---EEEEecccCCHHHHHHHHHhCCCcEEE-ECccchhheeeeeeeecccccccCCCcCCccc-ccCCCEE-EEE
Confidence 35788 455555 444555565556778899 99999998553221 1111110 0111 1222211 112
Q ss_pred ecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee---------------------ccccCCEEEEcc
Q 007568 380 PIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY---------------------RYRLGDVVEVAG 435 (598)
Q Consensus 380 p~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~---------------------RYr~GDvv~v~g 435 (598)
++ +.+. |.+|+.|||.|.. ..||| -|||||+++...
T Consensus 2334 --d~-------------~~~~-----vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~ 2393 (5163)
T PRK12316 2334 --DA-------------DLNL-----LAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRA 2393 (5163)
T ss_pred --CC-------------CCCC-----CCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcC
Confidence 21 1233 5689999999944 34554 299999999985
Q ss_pred ccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 436 FHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 436 ~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
...+.|+||.|++++++|++|...|||.+|.+.
T Consensus 2394 ----dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~ 2426 (5163)
T PRK12316 2394 ----DGVVEYLGRIDHQVKIRGFRIELGEIEARLQAH 2426 (5163)
T ss_pred ----CCcEEEecCCCCeEEEcCccCChHHHHHHHhhC
Confidence 788999999999999999999999999999864
No 82
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.18 E-value=5.4e-09 Score=115.00 Aligned_cols=63 Identities=19% Similarity=0.163 Sum_probs=54.4
Q ss_pred CCCCCeEEEEEccc---Ccee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHH
Q 007568 406 VKLGQEYEIVLTSF---TGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVV 469 (598)
Q Consensus 406 ve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av 469 (598)
+.+|+.+||+|++. .|++ .|+|||+++... ...+.|.||.++++++.|++|+..+|++++
T Consensus 327 ~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i 402 (483)
T PRK03640 327 VPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDE----EGFLYVLDRRSDLIISGGENIYPAEIEEVL 402 (483)
T ss_pred CCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcC----CCCEEEeecccCeEEeCCEEECHHHHHHHH
Confidence 56899999999764 4444 489999999985 678999999999999999999999999999
Q ss_pred HHH
Q 007568 470 DRG 472 (598)
Q Consensus 470 ~~~ 472 (598)
.+.
T Consensus 403 ~~~ 405 (483)
T PRK03640 403 LSH 405 (483)
T ss_pred HhC
Confidence 754
No 83
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.17 E-value=1.6e-08 Score=112.40 Aligned_cols=131 Identities=15% Similarity=0.090 Sum_probs=88.6
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC---CCCCCcceeeecCceEEEEEecCCc
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS---LPPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~---~~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
++++ .+++|| ....++++++.+ +++++ +.||+||+.......+. ..++..+. ..++ .-+++++.+
T Consensus 271 ~~l~---~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~-- 341 (509)
T PRK12406 271 SSLR---HVIHAAAPCPADVKRAMIEWW-GPVIY-EYYGSTESGAVTFATSEDALSHPGTVGK-AAPG-AELRFVDED-- 341 (509)
T ss_pred Ccee---EEEEcCCCCCHHHHHHHHHHc-CCcEE-eeccccccCceEecCcccccccCCCcCc-cCCC-cEEEEECCC--
Confidence 5677 445444 566777888878 47888 99999997532211111 11122232 2233 334444422
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc----Ccee-------------ccccCCEEEEccccCCCCEEEEEe
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF----TGLY-------------RYRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~----~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~g 447 (598)
++ .+..|+.+||+++.. .|+| -|+|||+++.+. ...+.++|
T Consensus 342 -------------~~-----~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~G 399 (509)
T PRK12406 342 -------------GR-----PLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDA----DGYLFLCD 399 (509)
T ss_pred -------------CC-----CCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcC----CceEEEee
Confidence 22 245799999999653 2555 288999999985 67899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|.+|+++++|++|++.+|+.+|.+.
T Consensus 400 R~~d~ik~~G~~v~~~~IE~~l~~~ 424 (509)
T PRK12406 400 RKRDMVISGGVNIYPAEIEAVLHAV 424 (509)
T ss_pred cccceEEECCEEECHHHHHHHHHhC
Confidence 9999999999999999999999753
No 84
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.16 E-value=7.1e-10 Score=124.63 Aligned_cols=132 Identities=17% Similarity=0.218 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCCCCCcceeeecCceEEEEEecCCcccCCC-CCCCCCCCCcccc
Q 007568 324 MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDCN-SAIDDFIEDEPVP 402 (598)
Q Consensus 324 ~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~-~~~~~~~~~~~l~ 402 (598)
......++.+.+ +++++ +.||+||+...+...+..+++..+.. .++ .+++..+.... +. ..+ ++++..+.
T Consensus 276 ~~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~p-~~g---~~i~~~~~~~~-~~~~~~--d~~g~~~~ 346 (540)
T PRK13388 276 SPRDIAEFSRRF-GCQVE-DGYGSSEGAVIVVREPGTPPGSIGRG-APG---VAIYNPETLTE-CAVARF--DAHGALLN 346 (540)
T ss_pred CHHHHHHHHHHh-CCcee-cccccccccceeecCCCCCCCCCCCC-CCC---cEEEcCCCCcc-ccceec--cCcccccc
Confidence 445556677777 48999 99999998543322222222223332 233 23433221000 00 000 01122211
Q ss_pred CCCCCCCCeEEEEEc-c---cCcee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHH
Q 007568 403 LSQVKLGQEYEIVLT-S---FTGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDL 465 (598)
Q Consensus 403 ~~eve~G~~yeLVvT-t---~~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v 465 (598)
..|+.|||+++ . ..|+| .|+|||+++.+. ...+.++||.+++++++|++|++.+|
T Consensus 347 ----~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~----dg~l~i~GR~~d~i~~~G~~v~p~eI 418 (540)
T PRK13388 347 ----ADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDA----DGWIYFAGRTADWMRVDGENLSAAPI 418 (540)
T ss_pred ----CCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcC----CCcEEEeccCCceEEECCEEeCHHHH
Confidence 34678999997 3 24666 499999999985 67899999999999999999999999
Q ss_pred HHHHHHH
Q 007568 466 QLVVDRG 472 (598)
Q Consensus 466 ~~av~~~ 472 (598)
|.+|.+.
T Consensus 419 E~~l~~~ 425 (540)
T PRK13388 419 ERILLRH 425 (540)
T ss_pred HHHHHhC
Confidence 9998863
No 85
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.15 E-value=6.6e-09 Score=112.66 Aligned_cols=59 Identities=19% Similarity=0.271 Sum_probs=51.0
Q ss_pred CeEEEEEccc---Cceec-------------cccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 410 QEYEIVLTSF---TGLYR-------------YRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 410 ~~yeLVvTt~---~Gl~R-------------Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+.+||+|++. .|+|+ |+|||+++.++ ...+.+.||.+|+++++|++|+..+|++++.+.
T Consensus 291 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 365 (436)
T TIGR01923 291 GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDG----EGFLYVLGRRDDLIISGGENIYPEEIETVLYQH 365 (436)
T ss_pred CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcC----CCCEEEeccccCeEEeCCEeeCHHHHHHHHHhC
Confidence 5689999764 45553 89999999986 678999999999999999999999999999753
No 86
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.15 E-value=8.1e-09 Score=116.37 Aligned_cols=132 Identities=18% Similarity=0.165 Sum_probs=88.1
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCC---CCCCCCcceeeecCceEEEEEecCCc
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDP---SLPPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~---~~~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
+++++ +.+|| ......++++.+ +++++ +.||+||+........ ...++..+ +..++. -.+.++++
T Consensus 323 ~~lr~---v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G-~~~~~~-~~~i~~~~-- 393 (563)
T PRK06710 323 SSIRA---CISGSAPLPVEVQEKFETVT-GGKLV-EGYGLTESSPVTHSNFLWEKRVPGSIG-VPWPDT-EAMIMSLE-- 393 (563)
T ss_pred hhhhh---eeeCCCcCCHHHHHHHHHhh-CCCEe-cccccccCccccccCcccccccCCccC-CCCCCC-eEEEEECC--
Confidence 56774 34444 445556677767 57888 9999999753211111 01111122 233343 23445433
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Cceec-------------cccCCEEEEccccCCCCEEEEEee
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLYR-------------YRLGDVVEVAGFHKGTPKLNFVCR 448 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~R-------------Yr~GDvv~v~g~~~~~P~i~f~gR 448 (598)
++.. +..|+.+||+|++. .|+|. |+|||++..+. ...+.++||
T Consensus 394 ------------~~~~-----~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~~~~~GR 452 (563)
T PRK06710 394 ------------TGEA-----LPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDE----DGFFYVKDR 452 (563)
T ss_pred ------------CCcc-----CCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcC----CCcEEEeec
Confidence 1222 45799999999763 45653 99999999875 678999999
Q ss_pred cCceEeeceeecCHHHHHHHHHHH
Q 007568 449 RKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 449 ~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.+++++++|++|++.+|+++|.+.
T Consensus 453 ~dd~i~~~G~~v~p~eiE~~l~~~ 476 (563)
T PRK06710 453 KKDMIVASGFNVYPREVEEVLYEH 476 (563)
T ss_pred cccEEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999999864
No 87
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.14 E-value=1e-08 Score=114.98 Aligned_cols=131 Identities=11% Similarity=0.061 Sum_probs=80.4
Q ss_pred CCCCCeEEEEEccc---Ccee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHH
Q 007568 406 VKLGQEYEIVLTSF---TGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVV 469 (598)
Q Consensus 406 ve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av 469 (598)
+.+|+.+||+++.. .|+| .|+|||+++++. ...+.|+||.+|++++.|++|++.+|+++|
T Consensus 381 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l 456 (545)
T PRK07768 381 LPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTE----EGEVVVCGRVKDVIIMAGRNIYPTDIERAA 456 (545)
T ss_pred CCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEec----CCEEEEEccccceEEECCEecCHHHHHHHH
Confidence 46789999999653 4554 399999999974 568999999999999999999999999999
Q ss_pred HHHHhhhhccCCeeeeeEEeeccCCCCceEEEEEEecCCCccchHHHHHHHHHhhcCCchhHhhhhcCCcCCeEEEEecc
Q 007568 470 DRGSQLLNKTGAELVDFTSHADIVNQPGHYIIYWEIKGDVEEGVLNQCCHEMDVSFVDPGYVVSRRTNSIGPLELCIVKR 549 (598)
Q Consensus 470 ~~~~~~l~~~g~~l~~f~~~~~~~~~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~~l~n~~Y~~~R~~g~l~p~~v~~v~~ 549 (598)
.+... + ....+..+.+ .+.. ......+++|.....+...+..+...+.+.+ +..-...|-.+.+++.
T Consensus 457 ~~~~~-v--~~~~vv~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l--------~~~~~~~p~~v~~v~~ 523 (545)
T PRK07768 457 ARVEG-V--RPGNAVAVRL-DAGH-SREGFAVAVESNAFEDPAEVRRIRHQVAHEV--------VAEVGVRPRNVVVLGP 523 (545)
T ss_pred HhCcc-c--ccceEEEEEe-cCCC-CceEEEEEEEecccccHHHHHHHHHHHHHHH--------HHHhCCCccEEEEeCC
Confidence 87422 1 1111111111 1111 1124566777543323223333333333332 0111255667888876
Q ss_pred chHH
Q 007568 550 GAFR 553 (598)
Q Consensus 550 g~f~ 553 (598)
+.|.
T Consensus 524 ~~lP 527 (545)
T PRK07768 524 GSIP 527 (545)
T ss_pred CcCC
Confidence 6654
No 88
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.14 E-value=6.3e-10 Score=129.89 Aligned_cols=135 Identities=17% Similarity=0.262 Sum_probs=85.0
Q ss_pred cCCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCC-CC-CCCCCcceeeecCceEEEEEecCC
Q 007568 309 LWPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVD-PS-LPPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 309 lwP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~-~~-~~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
+-++|++ +.+|| .....+.++..+ |+++. .+||+||+...+... +. ..++..|..+.|. .-+..++.++
T Consensus 459 lg~~lr~---~~sGGapl~~~~~~~~~~~~-g~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg-~e~ki~d~~~ 532 (746)
T PTZ00342 459 VNPNLEV---ILNGGGKLSPKIAEELSVLL-NVNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISPN-TKYKVRTWET 532 (746)
T ss_pred hCCCeEE---EEEcCCCCCHHHHHHHHHhc-CCCEE-EeeccCcccceeeeccCCCCCcccccCcCCCc-EEEEEecccc
Confidence 3467884 45555 445555566666 58999 999999974322211 11 1112222211122 2222232221
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEc---ccCceec--------------cccCCEEEEccccCCCCEEEEE
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLT---SFTGLYR--------------YRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvT---t~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~ 446 (598)
. .. ...+..|||+|. .+.|+|+ |+|||+++++. ...+.|+
T Consensus 533 ~--------------~~-----~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~----dG~l~i~ 589 (746)
T PTZ00342 533 Y--------------KA-----TDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINK----NGSLTFL 589 (746)
T ss_pred c--------------cc-----CCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECC----CCeEEEE
Confidence 0 11 112346899994 3578873 99999999985 7899999
Q ss_pred eecCceEee-ceeecCHHHHHHHHHHH
Q 007568 447 CRRKLILTV-NIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 447 gR~~~~l~~-~Gekv~e~~v~~av~~~ 472 (598)
||.++++++ .||+|++.+||+++.+.
T Consensus 590 gR~kdlIkls~Ge~I~p~eIE~~l~~~ 616 (746)
T PTZ00342 590 DRSKGLVKLSQGEYIETDMLNNLYSQI 616 (746)
T ss_pred ccCCCeEEeCCCEEEchHHHHHHHhcC
Confidence 999999995 69999999999998753
No 89
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.13 E-value=1.4e-08 Score=118.75 Aligned_cols=44 Identities=16% Similarity=0.123 Sum_probs=40.6
Q ss_pred cccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 425 YRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 425 Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|+|||+++++. ...+.|+||.||+||++|++|...||+++|...
T Consensus 591 ~~tGDl~~~d~----dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~ 634 (728)
T PLN03052 591 RRHGDIFERTS----GGYYRAHGRADDTMNLGGIKVSSVEIERVCNAA 634 (728)
T ss_pred EecCceEEECC----CCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhc
Confidence 89999999985 678999999999999999999999999999643
No 90
>PRK12316 peptide synthase; Provisional
Probab=99.13 E-value=2.9e-09 Score=146.09 Aligned_cols=133 Identities=15% Similarity=0.141 Sum_probs=87.1
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecC---CCCCCCC----CcceeeecCceEEEEE
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNV---DPSLPPE----DVTFAVIPTFSYFEFI 379 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~---~~~~~~~----~~~~~l~~~~~~~EFi 379 (598)
.|.|+ .++.|| .....+++.+.+++++++ ++||+||+.+.... .....++ ..|. ..++.. ...+
T Consensus 4808 ~~~lr---~v~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~-~~i~ 4881 (5163)
T PRK12316 4808 PPSLR---VYCFGGEAVAQASYDLAWRALKPVYLF-NGYGPTETTVTVLLWKARDGDACGAAYMPIGT-PLGNRS-GYVL 4881 (5163)
T ss_pred CCCcc---EEEEecccCCHHHHHHHHHhCCCCEEE-ecccCccceEEEEEEEcccccccCCCCCcccc-cccCCE-EEEE
Confidence 46788 445555 334444555557778999 99999998553221 1100000 0111 112221 1222
Q ss_pred ecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec---------------------cccCCEEEEcc
Q 007568 380 PIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR---------------------YRLGDVVEVAG 435 (598)
Q Consensus 380 p~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R---------------------Yr~GDvv~v~g 435 (598)
+ + +.+. +.+|+.|||+|+. ..|||+ |+|||+++...
T Consensus 4882 d-~--------------~~~~-----~p~g~~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~ 4941 (5163)
T PRK12316 4882 D-G--------------QLNP-----LPVGVAGELYLGGEGVARGYLERPALTAERFVPDPFGAPGGRLYRTGDLARYRA 4941 (5163)
T ss_pred C-C--------------CCCc-----CCCCCCceEEECCcccchhhcCChhhhhhhccCCCCCCCCcceeecCceeEECC
Confidence 2 1 1233 4589999999954 355552 99999999985
Q ss_pred ccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 436 FHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 436 ~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
...++|+||.|++++++|++|.+.+||.+|.+.
T Consensus 4942 ----dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~ 4974 (5163)
T PRK12316 4942 ----DGVIDYLGRVDHQVKIRGFRIELGEIEARLREH 4974 (5163)
T ss_pred ----CCcEEEeccccceEeeccEeecHHHHHHHHHhC
Confidence 789999999999999999999999999998754
No 91
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.13 E-value=1.5e-08 Score=112.57 Aligned_cols=132 Identities=13% Similarity=0.060 Sum_probs=87.0
Q ss_pred CCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCC--CCCcceeeecCceEEEEEecCCccc
Q 007568 311 PNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLP--PEDVTFAVIPTFSYFEFIPIHRRKQ 386 (598)
Q Consensus 311 P~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~--~~~~~~~l~~~~~~~EFip~~~~~~ 386 (598)
.+++.+ +.+|+ .....+.+++.+ +++++ +.||+||...........+ .+..+. ..+ +.-++.++ +
T Consensus 278 ~~l~~~--~~~G~~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~-g~~v~i~d-~---- 346 (508)
T TIGR02262 278 VRLRLC--TSAGEALPAEVGQRWQARF-GVDIV-DGIGSTEMLHIFLSNLPGDVRYGTSGK-PVP-GYRLRLVG-D---- 346 (508)
T ss_pred ccceeE--EEcCCCCCHHHHHHHHHHh-CCchh-hCccccccCceeecCCccCCCCCCcCC-CCC-CcEEEEEC-C----
Confidence 356642 33443 555566777777 47898 9999999743221111111 111111 122 23345554 1
Q ss_pred CCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee-------------ccccCCEEEEccccCCCCEEEEEeecC
Q 007568 387 DCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRK 450 (598)
Q Consensus 387 ~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~ 450 (598)
++.+ +.+|+.|||+|++. .|+| .|+|||+++... ...+.|+||.+
T Consensus 347 ----------~~~~-----~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~gR~~ 407 (508)
T TIGR02262 347 ----------GGQD-----VAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRND----DGSYTYAGRTD 407 (508)
T ss_pred ----------CCCC-----CCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcC----CccEEEecccc
Confidence 1333 45799999999763 4554 379999999874 66899999999
Q ss_pred ceEeeceeecCHHHHHHHHHHH
Q 007568 451 LILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 451 ~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|++++.|+++++.+|+++|.+.
T Consensus 408 d~i~~~G~~v~~~~ie~~l~~~ 429 (508)
T TIGR02262 408 DMLKVSGIYVSPFEIESALIQH 429 (508)
T ss_pred ceeeeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999864
No 92
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.12 E-value=1.2e-08 Score=110.63 Aligned_cols=59 Identities=17% Similarity=0.014 Sum_probs=51.5
Q ss_pred CCCeEEEEEcccCceeccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 408 LGQEYEIVLTSFTGLYRYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 408 ~G~~yeLVvTt~~Gl~RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.|+.+|+++++..| +|+|||+++... ...+.|+||.++++++.|++|++.+||+++.+.
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~~----dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~ 336 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKSE----RGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRL 336 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEECC----CccEEEecccCCeEEECCEEECHHHHHHHHHhC
Confidence 36678999988665 578999999875 568999999999999999999999999999864
No 93
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.12 E-value=1.1e-08 Score=114.09 Aligned_cols=63 Identities=19% Similarity=0.177 Sum_probs=54.1
Q ss_pred CCCCCeEEEEEccc---Ccee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHH
Q 007568 406 VKLGQEYEIVLTSF---TGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVV 469 (598)
Q Consensus 406 ve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av 469 (598)
+..|+.+||+|++. .|+| +|+|||+++... ...+.|.||.+++++++|+++++.+|+.++
T Consensus 360 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l 435 (524)
T PRK06188 360 VAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDE----DGFYYIVDRKKDMIVTGGFNVFPREVEDVL 435 (524)
T ss_pred CCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcC----CccEEEEeccccceecCCEEECHHHHHHHH
Confidence 46799999999763 4554 499999999985 678999999999999999999999999998
Q ss_pred HHH
Q 007568 470 DRG 472 (598)
Q Consensus 470 ~~~ 472 (598)
.+.
T Consensus 436 ~~~ 438 (524)
T PRK06188 436 AEH 438 (524)
T ss_pred HhC
Confidence 753
No 94
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.11 E-value=9.7e-09 Score=109.05 Aligned_cols=44 Identities=9% Similarity=0.049 Sum_probs=40.2
Q ss_pred ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 424 RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 424 RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+|+|||++++ . ...+.|+||.+|+++++|++|++.+|+.+|.+.
T Consensus 235 ~~~TGDl~~~-~----~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 278 (358)
T PRK07824 235 WFRTDDLGAL-D----DGVLTVLGRADDAISTGGLTVLPQVVEAALATH 278 (358)
T ss_pred ceecccEEEE-e----CCEEEEEeccCCeEEECCEEECHHHHHHHHHhC
Confidence 7999999998 3 468999999999999999999999999999864
No 95
>PRK05691 peptide synthase; Validated
Probab=99.10 E-value=4.6e-09 Score=142.75 Aligned_cols=133 Identities=14% Similarity=0.146 Sum_probs=89.9
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCC----CCCCCCcceeeecCceEEEEEecC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDP----SLPPEDVTFAVIPTFSYFEFIPIH 382 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~----~~~~~~~~~~l~~~~~~~EFip~~ 382 (598)
.|+|+. ++.|| .....+++.+.+++++++ +.||.||+.+.+.... .......|. ..++. .+..++.
T Consensus 1387 ~~~lr~---~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~-p~~~~-~~~i~d~- 1459 (4334)
T PRK05691 1387 CTSLRR---LFSGGEALPAELRNRVLQRLPQVQLH-NRYGPTETAINVTHWQCQAEDGERSPIGR-PLGNV-LCRVLDA- 1459 (4334)
T ss_pred CCcccE---EEEeecCCCHHHHHHHHHhCCCcEEE-eCCCcChheeeeeeeecccccCCCCcccc-eeCCC-EEEEECC-
Confidence 567884 44454 455566777778889999 9999999865332111 111111122 22232 2223321
Q ss_pred CcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee---------------------ccccCCEEEEccccC
Q 007568 383 RRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY---------------------RYRLGDVVEVAGFHK 438 (598)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~---------------------RYr~GDvv~v~g~~~ 438 (598)
+.+. +.+|+.|||+|.. ..||+ -|+|||+++...
T Consensus 1460 --------------~~~~-----vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~--- 1517 (4334)
T PRK05691 1460 --------------ELNL-----LPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNA--- 1517 (4334)
T ss_pred --------------CCCC-----CCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECC---
Confidence 1333 4589999999954 23443 399999999985
Q ss_pred CCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 439 GTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 439 ~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
...+.|+||.|++++++|++|...|||.+|.+.
T Consensus 1518 -dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~ 1550 (4334)
T PRK05691 1518 -DGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQ 1550 (4334)
T ss_pred -CCCEEEecccCcEEEECCEEcCHHHHHHHHHhC
Confidence 689999999999999999999999999999864
No 96
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.10 E-value=5.9e-09 Score=116.64 Aligned_cols=135 Identities=18% Similarity=0.160 Sum_probs=95.9
Q ss_pred cCCCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcc--eeecCCCCC-CCCCcceeeecCceEEEEEecCC
Q 007568 309 LWPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESW--IGVNVDPSL-PPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 309 lwP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~--i~~~~~~~~-~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
=.|+++.|. ++|+ .....+++++.+|...+. .+||+||.. +.++.+... .++.+|..+ + + .-=.+. +
T Consensus 297 ~l~sl~~v~--~gga~~~~~~~~~~~~~l~~~~v~-q~YGmTE~~~~~~~~~~~~e~k~~svG~~~-~-g-~~~~v~-~- 368 (537)
T KOG1176|consen 297 DLSSLRSVL--SGGAPLSPATLEKVKERLPNVTVI-QGYGMTEAGGLITSNDWGPERKPGSVGRLL-P-G-VRVKVL-D- 368 (537)
T ss_pred cCCccEEEE--ecCCCCCHHHHHHHHHhCCCceEE-EeeccccccCceeecCCCccCcccccCccc-c-c-eEEEee-C-
Confidence 356777542 4444 667777888889767777 999999964 455555442 344455533 2 2 111112 1
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEE---cccCceec--------------cccCCEEEEccccCCCCEEEEE
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVL---TSFTGLYR--------------YRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVv---Tt~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~ 446 (598)
+.+.. +.+++.|||++ +-..|+|. |+|||++-++. ...+.++
T Consensus 369 ------------e~g~~-----l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~----DG~l~Iv 427 (537)
T KOG1176|consen 369 ------------ETGVS-----LGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDE----DGYLYIV 427 (537)
T ss_pred ------------CCCCC-----CCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcC----CCeEEEe
Confidence 12333 44788999999 44588884 99999988885 8899999
Q ss_pred eecCceEeeceeecCHHHHHHHHHHH
Q 007568 447 CRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 447 gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+|.+|+|+.+|++|++.|||++|.+-
T Consensus 428 dR~KdlIk~~G~qv~P~EiE~vL~~h 453 (537)
T KOG1176|consen 428 DRSKDLIKYGGEQVSPAEIEAVLLTH 453 (537)
T ss_pred cchhhheeeCCEEeCHHHHHHHHHhC
Confidence 99999999999999999999999864
No 97
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.09 E-value=4.1e-08 Score=108.79 Aligned_cols=131 Identities=11% Similarity=0.046 Sum_probs=86.1
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCC---CCCCcceeeecCceEEEEEecCC
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSL---PPEDVTFAVIPTFSYFEFIPIHR 383 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~---~~~~~~~~l~~~~~~~EFip~~~ 383 (598)
+.+++ +++.|| ....++.+++.+| .+++ ..||+||+....-....+ .++..+..+ ..-++.++.
T Consensus 261 ~~~lr---~i~~~g~~~~~~~~~~~~~~~~-~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d~-- 330 (502)
T PRK08276 261 VSSLR---VAIHAAAPCPVEVKRAMIDWWG-PIIH-EYYASSEGGGVTVITSEDWLAHPGSVGKAV---LGEVRILDE-- 330 (502)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHHhC-cHhh-hhcccccccceeEecCccccccCCCcceec---ccEEEEECC--
Confidence 35677 445554 4566677888774 6777 999999974311111111 111122211 223333331
Q ss_pred cccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee--------------ccccCCEEEEccccCCCCEEEEE
Q 007568 384 RKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY--------------RYRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~ 446 (598)
++. .+..|+.|||++++. .|+| .|+|||+++++. ...+.++
T Consensus 331 -------------~~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~ 388 (502)
T PRK08276 331 -------------DGN-----ELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDE----DGYLYLT 388 (502)
T ss_pred -------------CCC-----CCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcC----CcCEEEe
Confidence 122 245789999999742 3343 478999999985 6689999
Q ss_pred eecCceEeeceeecCHHHHHHHHHHH
Q 007568 447 CRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 447 gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
||.+++++++|+++++.+|+.++.+.
T Consensus 389 GR~~~~i~~~G~~v~~~~iE~~i~~~ 414 (502)
T PRK08276 389 DRKSDMIISGGVNIYPQEIENLLVTH 414 (502)
T ss_pred ccCcceEEeCCEEeCHHHHHHHHHhC
Confidence 99999999999999999999999854
No 98
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.08 E-value=3.7e-08 Score=109.59 Aligned_cols=121 Identities=17% Similarity=0.135 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHhCCCCeecCcccCCCcceeec-CCCC--CCCCCcceeeecCceEEEEEecCCcccCCCCCCCCCCCCcc
Q 007568 324 MQHYLKKLRHYAGDLPLVSADYGSTESWIGVN-VDPS--LPPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEP 400 (598)
Q Consensus 324 ~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~-~~~~--~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~ 400 (598)
....+.++.+.+ +++++ +.||+||+..... ..+. ......+. ..+ +.-.+.++. ++.
T Consensus 300 ~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~-g~~~~i~d~---------------~~~- 359 (517)
T PRK08008 300 SDQEKDAFEERF-GVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGR-PGF-CYEAEIRDD---------------HNR- 359 (517)
T ss_pred CHHHHHHHHHHh-CCeEE-eeccccccccccccCCccccccCCcccc-CCC-CcEEEEECC---------------CCC-
Confidence 455566677777 58999 9999999743221 1111 00111111 111 223344431 123
Q ss_pred ccCCCCCCCCeEEEEEccc------Ccee--------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeec
Q 007568 401 VPLSQVKLGQEYEIVLTSF------TGLY--------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKN 460 (598)
Q Consensus 401 l~~~eve~G~~yeLVvTt~------~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv 460 (598)
++..|+.+||+|+.. .|+| .|+|||+++++. ...+.|+||.++++++.|++|
T Consensus 360 ----~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~i 431 (517)
T PRK08008 360 ----PLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDE----EGFFYFVDRRCNMIKRGGENV 431 (517)
T ss_pred ----CCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECC----CCcEEEeecccceEEeCCEEE
Confidence 245799999999752 2343 289999999985 678999999999999999999
Q ss_pred CHHHHHHHHHHH
Q 007568 461 TEKDLQLVVDRG 472 (598)
Q Consensus 461 ~e~~v~~av~~~ 472 (598)
++.+||.++.+.
T Consensus 432 ~p~~iE~~l~~~ 443 (517)
T PRK08008 432 SCVELENIIATH 443 (517)
T ss_pred CHHHHHHHHHhC
Confidence 999999999753
No 99
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.08 E-value=8.3e-09 Score=126.00 Aligned_cols=127 Identities=12% Similarity=0.206 Sum_probs=82.3
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC--CCCCCcceeeecCceEEEEEecCCcc
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS--LPPEDVTFAVIPTFSYFEFIPIHRRK 385 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~--~~~~~~~~~l~~~~~~~EFip~~~~~ 385 (598)
++++ .+.+|| .+..++.+++.+ +++++ +.||+||+...+...+. ..++..+. ..|+. -....|.+
T Consensus 907 ~~lr---~v~~gg~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~~g~-~~~~~~~~--- 976 (1140)
T PRK06814 907 RSLR---YVFAGAEKVKEETRQTWMEKF-GIRIL-EGYGVTETAPVIALNTPMHNKAGTVGR-LLPGI-EYRLEPVP--- 976 (1140)
T ss_pred ccee---EEEEcCCcCCHHHHHHHHHHh-CCcEE-eccccccccceEEecCCCCCCCCcCCc-cCCCC-eEEEeecC---
Confidence 4677 445555 455566666667 58899 99999998543322111 11111121 11111 11111111
Q ss_pred cCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee--------------ccccCCEEEEccccCCCCEEEEEee
Q 007568 386 QDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY--------------RYRLGDVVEVAGFHKGTPKLNFVCR 448 (598)
Q Consensus 386 ~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~gR 448 (598)
..|+.+||.|.. ..|+| +|+|||+++.+. ...+.|+||
T Consensus 977 ---------------------~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR 1031 (1140)
T PRK06814 977 ---------------------GIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDE----EGFITIKGR 1031 (1140)
T ss_pred ---------------------CCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECC----CCeEEEEec
Confidence 135678888844 24444 599999999985 789999999
Q ss_pred cCceEeeceeecCHHHHHHHHHHH
Q 007568 449 RKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 449 ~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.||+++++|++|++.+||+++.+.
T Consensus 1032 ~~d~i~~~G~~v~~~eIE~~l~~~ 1055 (1140)
T PRK06814 1032 AKRFAKIAGEMISLAAVEELAAEL 1055 (1140)
T ss_pred ccCeeeeCCEEECHHHHHHHHHhc
Confidence 999999999999999999999864
No 100
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.08 E-value=4.3e-09 Score=118.24 Aligned_cols=64 Identities=9% Similarity=0.027 Sum_probs=55.0
Q ss_pred CCCCCCeEEEEEccc---Ccee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHH
Q 007568 405 QVKLGQEYEIVLTSF---TGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLV 468 (598)
Q Consensus 405 eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~a 468 (598)
.+..|+.+||+|+.. .|+| .|+|||+++.+. ...+.|+||.+++++++|++|++.+||.+
T Consensus 368 ~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~----~g~l~~~GR~~~~ik~~G~~v~p~eIE~~ 443 (540)
T PRK05857 368 AGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERRE----DGFFYIKGRSSEMIICGGVNIAPDEVDRI 443 (540)
T ss_pred cCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcC----CceEEEeccccccEecCCEEECHHHHHHH
Confidence 456788999999764 4666 399999999974 67899999999999999999999999999
Q ss_pred HHHH
Q 007568 469 VDRG 472 (598)
Q Consensus 469 v~~~ 472 (598)
+...
T Consensus 444 l~~~ 447 (540)
T PRK05857 444 AEGV 447 (540)
T ss_pred HHhC
Confidence 9853
No 101
>PRK05691 peptide synthase; Validated
Probab=99.08 E-value=5.4e-09 Score=142.14 Aligned_cols=133 Identities=15% Similarity=0.186 Sum_probs=86.8
Q ss_pred CCCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecC---CCCCCCCC---cceeeecCceEEEEEe
Q 007568 310 WPNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNV---DPSLPPED---VTFAVIPTFSYFEFIP 380 (598)
Q Consensus 310 wP~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~---~~~~~~~~---~~~~l~~~~~~~EFip 380 (598)
.|+|++ ++.|| .....+++.+.++++.++ +.||.||+.+.+.. +....... .|. ..++..++ .+
T Consensus 3982 ~~~lr~---~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~-v~- 4054 (4334)
T PRK05691 3982 LDGLRW---MLPTGEAMPPELARQWLQRYPQIGLV-NAYGPAECSDDVAFFRVDLASTRGSYLPIGS-PTDNNRLY-LL- 4054 (4334)
T ss_pred CCCceE---EEecCCcCCHHHHHHHHHhCCCCeEE-eCccCccceeEEEEEEcccccccCCcCCCCC-ccCCCEEE-EE-
Confidence 457884 34444 334444555556788999 99999998653321 11111100 111 12222221 11
Q ss_pred cCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec---------------------cccCCEEEEccc
Q 007568 381 IHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR---------------------YRLGDVVEVAGF 436 (598)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R---------------------Yr~GDvv~v~g~ 436 (598)
++ ..+. +..|..|||+|.. ..||+. |||||+++...
T Consensus 4055 -d~-------------~~~~-----~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~- 4114 (4334)
T PRK05691 4055 -DE-------------ALEL-----VPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRS- 4114 (4334)
T ss_pred -CC-------------CCCC-----CCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecC-
Confidence 11 1233 4579999999955 355552 99999999985
Q ss_pred cCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 437 HKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 437 ~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
...|+|+||.|+.+|++|.+|...|||.+|.+.
T Consensus 4115 ---dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~ 4147 (4334)
T PRK05691 4115 ---DGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQ 4147 (4334)
T ss_pred ---CCcEEEecccCCcEEeceEEecHHHHHHHHHhC
Confidence 678999999999999999999999999998864
No 102
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.08 E-value=1.8e-08 Score=115.04 Aligned_cols=65 Identities=20% Similarity=0.224 Sum_probs=54.5
Q ss_pred CCCCCCeEEEEEcc---cCcee--------------------------------ccccCCEEEEccccCCCCEEEEEeec
Q 007568 405 QVKLGQEYEIVLTS---FTGLY--------------------------------RYRLGDVVEVAGFHKGTPKLNFVCRR 449 (598)
Q Consensus 405 eve~G~~yeLVvTt---~~Gl~--------------------------------RYr~GDvv~v~g~~~~~P~i~f~gR~ 449 (598)
++.+|+.|||.|.. ..||| .|+|||++++. ...+.|+||.
T Consensus 423 ~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-----dG~l~i~GR~ 497 (612)
T PRK12476 423 ELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-----DGELYITGRI 497 (612)
T ss_pred CCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-----CCEEEEEecc
Confidence 35689999999954 35665 58999999763 4679999999
Q ss_pred CceEeeceeecCHHHHHHHHHHHHh
Q 007568 450 KLILTVNIDKNTEKDLQLVVDRGSQ 474 (598)
Q Consensus 450 ~~~l~~~Gekv~e~~v~~av~~~~~ 474 (598)
+|+++++|++|++.+||++|.+..+
T Consensus 498 ~d~I~~~G~~I~p~eIE~~l~~~~p 522 (612)
T PRK12476 498 ADLIVIDGRNHYPQDIEATVAEASP 522 (612)
T ss_pred CcEEEECCcccCHHHHHHHHHHhcc
Confidence 9999999999999999999986533
No 103
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.07 E-value=4.1e-09 Score=122.53 Aligned_cols=62 Identities=23% Similarity=0.329 Sum_probs=52.7
Q ss_pred CCCCeEEEEEcc---cCceec--------------cccCCEEEEccccCCCCEEEEEeecCceEe-eceeecCHHHHHHH
Q 007568 407 KLGQEYEIVLTS---FTGLYR--------------YRLGDVVEVAGFHKGTPKLNFVCRRKLILT-VNIDKNTEKDLQLV 468 (598)
Q Consensus 407 e~G~~yeLVvTt---~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~-~~Gekv~e~~v~~a 468 (598)
.+|..|||.|.. +.|+|. |+|||+++++. ...+.|+||.|++++ .+|++|.+.+||++
T Consensus 503 ~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~----dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~ 578 (700)
T PTZ00216 503 TPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAA----NGTLRIIGRVKALAKNCLGEYIALEALEAL 578 (700)
T ss_pred CCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcC----CCcEEEEEehHhheecCCCceeccHHHHHH
Confidence 456678999944 467773 99999999985 778999999999997 89999999999999
Q ss_pred HHHH
Q 007568 469 VDRG 472 (598)
Q Consensus 469 v~~~ 472 (598)
+.+.
T Consensus 579 l~~~ 582 (700)
T PTZ00216 579 YGQN 582 (700)
T ss_pred HhcC
Confidence 9754
No 104
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.07 E-value=1.2e-08 Score=112.46 Aligned_cols=61 Identities=11% Similarity=0.145 Sum_probs=52.3
Q ss_pred CCCeEEEEEcc---cCceec--------cccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 408 LGQEYEIVLTS---FTGLYR--------YRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 408 ~G~~yeLVvTt---~~Gl~R--------Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.|+.|||+|.. ..|+|. |+|||+++++. ...+.|+||.+|+++++|+||++.+||+++.+.
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~ 369 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLDA----QGYLHILGRNSQKIITGGENVYPAEVEAAILAT 369 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEcC----CCCEEEEeecCCEEEECCEEECHHHHHHHHHhC
Confidence 48889999943 456652 89999999874 678999999999999999999999999999864
No 105
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.06 E-value=2.2e-08 Score=113.31 Aligned_cols=44 Identities=18% Similarity=0.105 Sum_probs=40.5
Q ss_pred cccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 425 YRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 425 Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|+|||+++++. ...+.|+||.++++++.|++|.+.+|+++|.+.
T Consensus 432 ~~TGD~~~~~~----dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~ 475 (576)
T PRK05620 432 LRTGDVGSVTR----DGFLTIHDRARDVIRSGGEWIYSAQLENYIMAA 475 (576)
T ss_pred EecCceEEEcC----CceEEEEechhhhhhcCCEEEcHHHHHHHHhcC
Confidence 89999999875 678999999999999999999999999999753
No 106
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.05 E-value=3e-08 Score=112.15 Aligned_cols=63 Identities=22% Similarity=0.254 Sum_probs=53.7
Q ss_pred CCCCCCeEEEEEcc---cCcee-------------------------ccccCCEEEEccccCCCCEEEEEeecCceEeec
Q 007568 405 QVKLGQEYEIVLTS---FTGLY-------------------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVN 456 (598)
Q Consensus 405 eve~G~~yeLVvTt---~~Gl~-------------------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~ 456 (598)
++.+|+.|||.|.. ..|+| .|+|||++.+. ...+.|+||.+|+++++
T Consensus 391 ~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-----~G~l~~~GR~~d~i~~~ 465 (578)
T PRK05850 391 ECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-----EGELFIVGRIKDLLIVD 465 (578)
T ss_pred CCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-----CCEEEEEcccccEEEEC
Confidence 46789999999955 34555 49999999875 35899999999999999
Q ss_pred eeecCHHHHHHHHHHH
Q 007568 457 IDKNTEKDLQLVVDRG 472 (598)
Q Consensus 457 Gekv~e~~v~~av~~~ 472 (598)
|++|++.+||++|.+.
T Consensus 466 G~~i~p~eIE~~l~~~ 481 (578)
T PRK05850 466 GRNHYPDDIEATIQEI 481 (578)
T ss_pred CeecCHHHHHHHHHHh
Confidence 9999999999999864
No 107
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.05 E-value=4.2e-09 Score=120.40 Aligned_cols=63 Identities=19% Similarity=0.168 Sum_probs=44.9
Q ss_pred CCeEEEEEcc---cCcee--------------ccccCCEEEEccccCCCCEEEEEeecCceEee-ceeecC--HHHHHHH
Q 007568 409 GQEYEIVLTS---FTGLY--------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTV-NIDKNT--EKDLQLV 468 (598)
Q Consensus 409 G~~yeLVvTt---~~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~-~Gekv~--e~~v~~a 468 (598)
|..+||+|.. +.|+| .|+|||++++.+-......+.|+||.++++++ +|++++ +.|++.+
T Consensus 409 ~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~ 488 (614)
T PRK08180 409 GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAV 488 (614)
T ss_pred CCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHH
Confidence 5567998843 45666 28999999995211124578999999988874 698776 7788777
Q ss_pred HHH
Q 007568 469 VDR 471 (598)
Q Consensus 469 v~~ 471 (598)
+.+
T Consensus 489 l~~ 491 (614)
T PRK08180 489 SAG 491 (614)
T ss_pred hhc
Confidence 653
No 108
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.05 E-value=2.4e-08 Score=112.08 Aligned_cols=135 Identities=14% Similarity=0.143 Sum_probs=84.0
Q ss_pred CCCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcce-eecCC-CCC----CC-------CCcceeeecCce
Q 007568 310 WPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWI-GVNVD-PSL----PP-------EDVTFAVIPTFS 374 (598)
Q Consensus 310 wP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i-~~~~~-~~~----~~-------~~~~~~l~~~~~ 374 (598)
+++++.+ +.+|+ ....++++++.+ +++++ +.||+||+.. +.... +.. ++ ...+. ..| +.
T Consensus 292 ~~~l~~~--~~~G~~l~~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-p~p-g~ 365 (539)
T PRK07008 292 FSTLRRT--VIGGSACPPAMIRTFEDEY-GVEVI-HAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGR-VIY-GV 365 (539)
T ss_pred cccceEE--EEcCCCCCHHHHHHHHHHh-CCcee-cccccccccccceecccccccccCCchhhhhhcccCCc-ccc-ce
Confidence 4677742 33443 556667777777 58999 9999999742 22110 000 00 00111 111 12
Q ss_pred EEEEEecCCcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Cceec----------cccCCEEEEccccCCCC
Q 007568 375 YFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLYR----------YRLGDVVEVAGFHKGTP 441 (598)
Q Consensus 375 ~~EFip~~~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~R----------Yr~GDvv~v~g~~~~~P 441 (598)
-.+.++.+ ...+. ...++.+||+++.. .|+|. |+|||+++.+. ..
T Consensus 366 ~~~i~d~~---------------~~~~~---~~~~~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~----dg 423 (539)
T PRK07008 366 DMKIVGDD---------------GRELP---WDGKAFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDA----DG 423 (539)
T ss_pred EEEEECCC---------------CCccC---CCCCcceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcC----CC
Confidence 23333311 22221 11124689999763 45442 99999999975 67
Q ss_pred EEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 442 KLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 442 ~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.+.|+||.+|++++.|++|++.+|++++...
T Consensus 424 ~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 454 (539)
T PRK07008 424 FMQITDRSKDVIKSGGEWISSIDIENVAVAH 454 (539)
T ss_pred cEEEeecccCEEEeCCeEEcHHHHHHHHHhC
Confidence 8999999999999999999999999998753
No 109
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.04 E-value=2.5e-09 Score=123.55 Aligned_cols=61 Identities=21% Similarity=0.333 Sum_probs=51.9
Q ss_pred CCCCeEEEEEcc---cCceec-------------cccCCEEEEccccCCCCEEEEEeecCceEee-ceeecCHHHHHHHH
Q 007568 407 KLGQEYEIVLTS---FTGLYR-------------YRLGDVVEVAGFHKGTPKLNFVCRRKLILTV-NIDKNTEKDLQLVV 469 (598)
Q Consensus 407 e~G~~yeLVvTt---~~Gl~R-------------Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~-~Gekv~e~~v~~av 469 (598)
..|..|||+|.. +.|+|. |+|||+++++. ...+.|+||.++++++ .||+|++.+||+++
T Consensus 461 ~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~----dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l 536 (660)
T PLN02430 461 GEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILP----NGVLKIIDRKKNLIKLSQGEYVALEYLENVY 536 (660)
T ss_pred CCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECC----CCcEEEEEcccccEEcCCCcEEchHHHHHHH
Confidence 345678999954 578873 99999999974 6789999999999996 69999999999988
Q ss_pred HH
Q 007568 470 DR 471 (598)
Q Consensus 470 ~~ 471 (598)
.+
T Consensus 537 ~~ 538 (660)
T PLN02430 537 GQ 538 (660)
T ss_pred hc
Confidence 64
No 110
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.03 E-value=7.7e-08 Score=108.04 Aligned_cols=59 Identities=15% Similarity=0.162 Sum_probs=50.0
Q ss_pred CeEEEEEcc---cCceec-----------cccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 410 QEYEIVLTS---FTGLYR-----------YRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 410 ~~yeLVvTt---~~Gl~R-----------Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
..+||+|.. ..|+|. |+|||+++... ...+.|+||.+++++++|++|++.+|+.++.+.
T Consensus 383 ~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~ 455 (542)
T PRK06018 383 TFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDA----YGYMRITDRSKDVIKSGGEWISSIDLENLAVGH 455 (542)
T ss_pred ceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcC----CccEEEEecCCCeEEECCEEECHHHHHHHHHhC
Confidence 568999953 356664 99999999874 568999999999999999999999999999753
No 111
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.03 E-value=4.4e-09 Score=120.47 Aligned_cols=64 Identities=22% Similarity=0.269 Sum_probs=47.9
Q ss_pred CCCCeEEEEEcc---cCceec--------------cccCCEEEEccccCCCCEEEEEeecCceEee-ceeecCHHHHH--
Q 007568 407 KLGQEYEIVLTS---FTGLYR--------------YRLGDVVEVAGFHKGTPKLNFVCRRKLILTV-NIDKNTEKDLQ-- 466 (598)
Q Consensus 407 e~G~~yeLVvTt---~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~-~Gekv~e~~v~-- 466 (598)
..|+.|||+|.. ..|+|. |+|||++++.+-......+.|+||.+|++++ +|+||++.++|
T Consensus 419 ~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e 498 (624)
T PRK12582 419 PVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPD 498 (624)
T ss_pred cCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHH
Confidence 358889999944 467773 9999999984311123578999999999885 69999988885
Q ss_pred HHHH
Q 007568 467 LVVD 470 (598)
Q Consensus 467 ~av~ 470 (598)
.++.
T Consensus 499 ~~l~ 502 (624)
T PRK12582 499 AVAA 502 (624)
T ss_pred HHHh
Confidence 4444
No 112
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.02 E-value=2.4e-08 Score=113.17 Aligned_cols=62 Identities=15% Similarity=0.171 Sum_probs=53.7
Q ss_pred CCCCCeEEEEEcc---cCcee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHH
Q 007568 406 VKLGQEYEIVLTS---FTGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVV 469 (598)
Q Consensus 406 ve~G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av 469 (598)
+..|+.+||+|+. ..|+| .|+|||++.+ . ...+.|+||.+|+++++|++|++.+||++|
T Consensus 406 ~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l 480 (579)
T PRK09192 406 LPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL-L----DGYLYITGRAKDLIIINGRNIWPQDIEWIA 480 (579)
T ss_pred CCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-E----CCEEEEEeccccEEEECCCccCHHHHHHHH
Confidence 5578999999965 35666 4899999987 4 578999999999999999999999999999
Q ss_pred HHH
Q 007568 470 DRG 472 (598)
Q Consensus 470 ~~~ 472 (598)
.+.
T Consensus 481 ~~~ 483 (579)
T PRK09192 481 EQE 483 (579)
T ss_pred Hhc
Confidence 975
No 113
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.02 E-value=1e-07 Score=107.60 Aligned_cols=123 Identities=24% Similarity=0.323 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHhCCCCeecCcccCCCccee--ecCCCCCC-------CCCcceeeecCceEEEEEecCCcccCCCCCCCC
Q 007568 324 MQHYLKKLRHYAGDLPLVSADYGSTESWIG--VNVDPSLP-------PEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDD 394 (598)
Q Consensus 324 ~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~--~~~~~~~~-------~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~ 394 (598)
.....+.+++.+| ..++...||+||.... +....... +...|. ..|+ .-+++++++
T Consensus 340 ~~~~~~~~~~~~g-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~-p~~g-~~v~v~d~~------------ 404 (567)
T PRK06178 340 NPDYRQRWRALTG-SVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGL-PVPG-TEFKICDFE------------ 404 (567)
T ss_pred CHHHHHHHHHHhC-CcccccccccccccccceeccccccCccccccCCccccc-ccCC-cEEEEEcCC------------
Confidence 4566677777786 4555368999996432 21110000 111121 2233 234555433
Q ss_pred CCCCccccCCCCCCCCeEEEEEccc---Ccee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeecee
Q 007568 395 FIEDEPVPLSQVKLGQEYEIVLTSF---TGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNID 458 (598)
Q Consensus 395 ~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Ge 458 (598)
+... +..|+.+||+|.+. .|+| .|+|||++++.+ ...+.|+||.+|+++++|+
T Consensus 405 --~~~~-----~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~ 473 (567)
T PRK06178 405 --TGEL-----LPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDE----QGFLHYLGRRKEMLKVNGM 473 (567)
T ss_pred --CCCc-----CCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEec----CCeEEEEecccccEEECCE
Confidence 1233 45788999999552 4444 389999999975 6789999999999999999
Q ss_pred ecCHHHHHHHHHHH
Q 007568 459 KNTEKDLQLVVDRG 472 (598)
Q Consensus 459 kv~e~~v~~av~~~ 472 (598)
++++.+|++++.+.
T Consensus 474 ~i~~~eiE~~l~~~ 487 (567)
T PRK06178 474 SVFPSEVEALLGQH 487 (567)
T ss_pred EECHHHHHHHHHhC
Confidence 99999999998753
No 114
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.01 E-value=8.1e-08 Score=106.67 Aligned_cols=133 Identities=14% Similarity=0.094 Sum_probs=84.5
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcce-eecCCCCCCCCCcceeeecCceEEEEEecCCccc
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWI-GVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQ 386 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i-~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~ 386 (598)
++++ .+.+|| ......++++.+++++++ +.||+||... +.......+....+-...++ .-.+.++.+
T Consensus 296 ~~l~---~i~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~-~~~~i~~~~---- 366 (533)
T PRK07798 296 SSLF---AIASGGALFSPSVKEALLELLPNVVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTIG-PRTVVLDED---- 366 (533)
T ss_pred CceE---EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccccccCCCCCCccCCCCccCCC-ceEEEECCC----
Confidence 4666 455555 555666777778778999 9999999633 32221111111111011122 223333322
Q ss_pred CCCCCCCCCCCCccccCCCCCCCCe--EEEEEccc--Cc-----------------eeccccCCEEEEccccCCCCEEEE
Q 007568 387 DCNSAIDDFIEDEPVPLSQVKLGQE--YEIVLTSF--TG-----------------LYRYRLGDVVEVAGFHKGTPKLNF 445 (598)
Q Consensus 387 ~~~~~~~~~~~~~~l~~~eve~G~~--yeLVvTt~--~G-----------------l~RYr~GDvv~v~g~~~~~P~i~f 445 (598)
+.. +.+|+. ++++.+.. .| ...|+|||+++++. ...+.|
T Consensus 367 -----------~~~-----~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~----~g~l~~ 426 (533)
T PRK07798 367 -----------GNP-----VEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA----DGTITL 426 (533)
T ss_pred -----------CCC-----CCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC----CCcEEE
Confidence 233 345665 77777542 22 22478999999985 678999
Q ss_pred EeecCceEeeceeecCHHHHHHHHHHH
Q 007568 446 VCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 446 ~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+||.+++++++|++|++.+|++++.+.
T Consensus 427 ~GR~~~~i~~~G~~v~~~eIE~~l~~~ 453 (533)
T PRK07798 427 LGRGSVCINTGGEKVFPEEVEEALKAH 453 (533)
T ss_pred EccccceEecCCEEeCHHHHHHHHHhC
Confidence 999999999999999999999998754
No 115
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.00 E-value=1.1e-08 Score=110.31 Aligned_cols=120 Identities=26% Similarity=0.371 Sum_probs=80.1
Q ss_pred cCCCCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCcce-eecCC-CCC--CCCCcceeeecCceEEEEEecC
Q 007568 309 LWPNAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTESWI-GVNVD-PSL--PPEDVTFAVIPTFSYFEFIPIH 382 (598)
Q Consensus 309 lwP~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~~i-~~~~~-~~~--~~~~~~~~l~~~~~~~EFip~~ 382 (598)
-+++++.|. .+|+ .....+++++.++.++++ +.||+||+.. ++... ... .++..+. ..| +.-++.++++
T Consensus 275 ~l~~lr~v~--~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~ivd~~ 349 (417)
T PF00501_consen 275 DLSSLRTVI--SGGEPLPPDLLRRLRKAFGNAPII-NLYGSTETGSIATIRPPEDDIEKPGSVGK-PLP-GVEVKIVDPN 349 (417)
T ss_dssp TGTT-SEEE--EESST-CHHHHHHHHHHHTTSEEE-EEEEEGGGSSEEEEEETTTHHSSTTSEBE-EST-TEEEEEECTT
T ss_pred ccccccccc--cccccCChhhccccccccccccce-ecccccccceeeecccccccccccccccc-ccc-cccccccccc
Confidence 355688643 3443 667778889988756888 9999999744 44221 111 1222222 333 5566777533
Q ss_pred CcccCCCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCceec--------------cccCCEEEEccccCCCCEEEE
Q 007568 383 RRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLYR--------------YRLGDVVEVAGFHKGTPKLNF 445 (598)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f 445 (598)
++++ +.+|+.|||+|++ ..|+|+ |+|||+++++. ...|.+
T Consensus 350 --------------~~~~-----~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~----~G~~~~ 406 (417)
T PF00501_consen 350 --------------TGEP-----LPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDE----DGYLYI 406 (417)
T ss_dssp --------------TSSB-----ESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEET----TSEEEE
T ss_pred --------------cccc-----ccccccccccccCCccceeeeccccccccccccccceecceEEEECC----CCeEEE
Confidence 2344 3589999999974 356664 99999999984 679999
Q ss_pred EeecCceEeec
Q 007568 446 VCRRKLILTVN 456 (598)
Q Consensus 446 ~gR~~~~l~~~ 456 (598)
+||.+|+++++
T Consensus 407 ~GR~~~~i~~~ 417 (417)
T PF00501_consen 407 LGRSDDMIKVR 417 (417)
T ss_dssp EEEGSCEEEET
T ss_pred EEeeCCEEEeC
Confidence 99999999874
No 116
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.00 E-value=1.3e-08 Score=115.48 Aligned_cols=60 Identities=18% Similarity=0.173 Sum_probs=52.4
Q ss_pred CCeEEEEEcc---cCcee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 409 GQEYEIVLTS---FTGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 409 G~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|+.|||+|++ +.||| +|+|||+++.+. ...+.|+||.+|++++.|++|++.+||.++.+.
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHP----DGHVEIKDRSKDIIISGGENISSVEVENVLYKY 465 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEcC----CCeEEEEeccCcEEEECCEEECHHHHHHHHHhC
Confidence 3679999965 46766 599999999974 678999999999999999999999999999864
No 117
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=98.92 E-value=7.2e-09 Score=116.51 Aligned_cols=135 Identities=21% Similarity=0.277 Sum_probs=91.4
Q ss_pred ccCCCCceeEEEEccChH---HHHHHHHHHhCCCCeecCcccCCCcceeecC-CCCC-CCCCcceeeecCceEEEEEecC
Q 007568 308 KLWPNAKYVYSIMTGSMQ---HYLKKLRHYAGDLPLVSADYGSTESWIGVNV-DPSL-PPEDVTFAVIPTFSYFEFIPIH 382 (598)
Q Consensus 308 ~lwP~l~~i~~~~~g~~~---~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~-~~~~-~~~~~~~~l~~~~~~~EFip~~ 382 (598)
.|++|.+ .+++|+++ .-..=++..+ +++++ ++||.||+..|... .+.+ ..+.+|- +.|.. -+=+++++
T Consensus 416 ~LGg~vr---~~~sGaAPls~ev~~F~r~~~-g~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG~-p~p~~-~vKL~dvp 488 (691)
T KOG1256|consen 416 SLGGNVR---LIISGAAPLSPEVLTFFRAAL-GCRVL-EGYGLTETSAGTTLTLPGDNVLGSVGP-PVPGN-EVKLVDVP 488 (691)
T ss_pred HhcCcee---EEEecCCCCCHHHHHHHHHhc-Cceee-ecccccccCCceEeccCCCCCCCCcCC-cccCc-eEEEechH
Confidence 5778888 56777732 2222233334 69999 99999998643322 1211 1222332 22222 22334444
Q ss_pred CcccCCCCCCCCCCCCccccCCCCCCCCeEEEEE---cccCceec--------------cccCCEEEEccccCCCCEEEE
Q 007568 383 RRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVL---TSFTGLYR--------------YRLGDVVEVAGFHKGTPKLNF 445 (598)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVv---Tt~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f 445 (598)
+.+- ...|..|||.| +-+.|+|- .+|||+++++. ...+.+
T Consensus 489 e~ny-------------------~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p----~G~l~I 545 (691)
T KOG1256|consen 489 EMNY-------------------DADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDP----NGTLKI 545 (691)
T ss_pred HhCc-------------------CcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECC----CccEEE
Confidence 3321 23466899999 66799994 89999999997 889999
Q ss_pred EeecCceEeec-eeecCHHHHHHHHHHH
Q 007568 446 VCRRKLILTVN-IDKNTEKDLQLVVDRG 472 (598)
Q Consensus 446 ~gR~~~~l~~~-Gekv~e~~v~~av~~~ 472 (598)
+||.++++++. ||.|.+..||++..+.
T Consensus 546 idRkK~ifklaqGEyVaPe~IEniy~~~ 573 (691)
T KOG1256|consen 546 IDRKKNIFKLAQGEYVAPEKIENIYKRS 573 (691)
T ss_pred EecccceEEcCCCCccChHHHHHHHhcC
Confidence 99999998887 8999999999999874
No 118
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=98.92 E-value=4.9e-09 Score=112.07 Aligned_cols=64 Identities=19% Similarity=0.375 Sum_probs=56.8
Q ss_pred CCCCCCeEEEEE---cccCceec--------------cccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHH
Q 007568 405 QVKLGQEYEIVL---TSFTGLYR--------------YRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQL 467 (598)
Q Consensus 405 eve~G~~yeLVv---Tt~~Gl~R--------------Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~ 467 (598)
+++.|..|||.+ ++..|+|- |+|||+.+... ...++++||.+|||..+||+|++.|||+
T Consensus 426 ~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~e----nG~i~iVGRskdmI~rGGENVyP~ElE~ 501 (596)
T KOG1177|consen 426 EVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDE----NGTIEIVGRSKDMIIRGGENVYPTELED 501 (596)
T ss_pred ccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcC----CCcEEEEEcccCeEEeCCcccChHHHHH
Confidence 356788899999 66788884 99999999996 7899999999999999999999999999
Q ss_pred HHHHH
Q 007568 468 VVDRG 472 (598)
Q Consensus 468 av~~~ 472 (598)
.+.+-
T Consensus 502 fL~~h 506 (596)
T KOG1177|consen 502 FLNKH 506 (596)
T ss_pred HHhhC
Confidence 88753
No 119
>PRK08162 acyl-CoA synthetase; Validated
Probab=98.87 E-value=3.9e-07 Score=102.19 Aligned_cols=59 Identities=17% Similarity=0.202 Sum_probs=50.9
Q ss_pred CeEEEEEcc---cCcee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 410 QEYEIVLTS---FTGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 410 ~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+.|||+|+. ..|+| .|+|||+++.+. ...+.|+||.++++++.|++|++.+||.+|.+.
T Consensus 387 ~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~----dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~ 461 (545)
T PRK08162 387 TIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHP----DGYIKIKDRSKDIIISGGENISSIEVEDVLYRH 461 (545)
T ss_pred ceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcC----CccEEEEecccceEEeCCEEECHHHHHHHHHhC
Confidence 359999976 35665 389999999985 678999999999999999999999999999754
No 120
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.84 E-value=3e-07 Score=100.87 Aligned_cols=44 Identities=11% Similarity=0.131 Sum_probs=39.9
Q ss_pred ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 424 RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 424 RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.|+|||+++++ ...+.|+||.+|++++.|++|++.+||++|.+.
T Consensus 333 ~~~TGD~~~~~-----~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~ 376 (458)
T PRK09029 333 WFATRDRGEWQ-----NGELTILGRLDNLFFSGGEGIQPEEIERVINQH 376 (458)
T ss_pred ccCCCCcEEEe-----CCEEEEecccccceeeCCEEeCHHHHHHHHhcC
Confidence 48999999987 357999999999999999999999999999864
No 121
>PRK13390 acyl-CoA synthetase; Provisional
Probab=98.74 E-value=8.2e-07 Score=98.48 Aligned_cols=130 Identities=11% Similarity=0.090 Sum_probs=85.0
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC-C--CCCCcceeeecCceEEEEEecCCc
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS-L--PPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~-~--~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
++++ .+++|+ .....+.+++.++ .+++ ..||+||+......+.. . .++..+. ..++ . .+.++.
T Consensus 270 ~~l~---~v~~~g~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~g-~-~~i~d~--- 338 (501)
T PRK13390 270 SSLR---AVIHAAAPCPVDVKHAMIDWLG-PIVY-EYYSSTEAHGMTFIDSPDWLAHPGSVGR-SVLG-D-LHICDD--- 338 (501)
T ss_pred hhhh---eEEEcCCCCCHHHHHHHHHhcC-Ccee-eeecccccCceEEecchhhccCCCCcCC-cccc-e-EEEECC---
Confidence 4677 445454 4455566777774 7888 99999997422111111 0 1111222 1222 2 333331
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc---Ccee----------------ccccCCEEEEccccCCCCEEEE
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF---TGLY----------------RYRLGDVVEVAGFHKGTPKLNF 445 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~---~Gl~----------------RYr~GDvv~v~g~~~~~P~i~f 445 (598)
++++ +.+|+.|||+|.+. .|+| .|+|||+++++. ...+.|
T Consensus 339 ------------~~~~-----~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~----dg~l~~ 397 (501)
T PRK13390 339 ------------DGNE-----LPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE----DGYLYL 397 (501)
T ss_pred ------------CCCC-----CCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC----CCeEEE
Confidence 2333 45899999999653 3443 368999999985 678999
Q ss_pred EeecCceEeeceeecCHHHHHHHHHHH
Q 007568 446 VCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 446 ~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.||.++++++.|++|++.+|+++|...
T Consensus 398 ~gR~~~~i~~~G~~v~p~eIE~~l~~~ 424 (501)
T PRK13390 398 ADRKSFMIISGGVNIYPQETENALTMH 424 (501)
T ss_pred eeccccceeECCeeeCHHHHHHHHHhC
Confidence 999999999999999999999999743
No 122
>PRK13391 acyl-CoA synthetase; Provisional
Probab=98.71 E-value=6.1e-07 Score=99.85 Aligned_cols=130 Identities=11% Similarity=0.043 Sum_probs=86.5
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCC-C--CCCCcceeeecCceEEEEEecCCc
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPS-L--PPEDVTFAVIPTFSYFEFIPIHRR 384 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~-~--~~~~~~~~l~~~~~~~EFip~~~~ 384 (598)
++++. +++|+ .....+++++.+| .+++ ..||+||+......... + .++..+. ..++ ..++++.+
T Consensus 275 ~~l~~---~~~gg~~~~~~~~~~~~~~~g-~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~g--~~~i~d~~-- 344 (511)
T PRK13391 275 SSLEV---AIHAAAPCPPQVKEQMIDWWG-PIIH-EYYAATEGLGFTACDSEEWLAHPGTVGR-AMFG--DLHILDDD-- 344 (511)
T ss_pred cceeE---EEEccCCCCHHHHHHHHHHcC-Ccee-eeeccccccceEEecCccccccCCCcCC-cccc--eEEEECCC--
Confidence 46773 44444 5566677888785 6788 99999997532211111 1 1111222 1122 34444421
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCCCeEEEEEccc--Ccee---------------ccccCCEEEEccccCCCCEEEEEe
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF--TGLY---------------RYRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~--~Gl~---------------RYr~GDvv~v~g~~~~~P~i~f~g 447 (598)
+.. ++.|+.+||++... .|+| .|+|||+++... ...+.|+|
T Consensus 345 -------------~~~-----~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~----~g~l~~~g 402 (511)
T PRK13391 345 -------------GAE-----LPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDE----DGYLYLTD 402 (511)
T ss_pred -------------CCC-----CCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEECC----CccEEEec
Confidence 222 35789999999663 3444 378999999875 67899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHH
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
|.+++++++|+++++.+|+++|.+.
T Consensus 403 R~~~~i~~~G~~v~~~eie~~l~~~ 427 (511)
T PRK13391 403 RAAFMIISGGVNIYPQEAENLLITH 427 (511)
T ss_pred cCCCEEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999864
No 123
>PLN02479 acetate-CoA ligase
Probab=98.69 E-value=4.1e-07 Score=102.94 Aligned_cols=59 Identities=19% Similarity=0.165 Sum_probs=50.8
Q ss_pred CeEEEEEcc---cCcee-------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 410 QEYEIVLTS---FTGLY-------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 410 ~~yeLVvTt---~~Gl~-------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+.|||+|+. ..|+| .|+|||+++++. ...+.|+||.++++++.|++|++.+|+.++.+.
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~ 475 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHP----DGYIEIKDRSKDIIISGGENISSLEVENVVYTH 475 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcC----CccEEEeccccceEEeCCEEEcHHHHHHHHHhC
Confidence 569999975 34565 499999999874 678999999999999999999999999999753
No 124
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=98.65 E-value=7.4e-07 Score=96.61 Aligned_cols=45 Identities=18% Similarity=0.216 Sum_probs=41.1
Q ss_pred ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 424 RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 424 RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
.|+|||+++... ...+.|+||.|+++++.|++|++.+||+++.+.
T Consensus 276 ~~~tgD~g~~d~----~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~ 320 (386)
T TIGR02372 276 RLDLQDRLAWDK----DGGFTILGRKDEILQVGGVNVSPGHVRDILERN 320 (386)
T ss_pred eeecCceEEEcC----CCcEEEecccCCEEEECCEEEcHHHHHHHHHcC
Confidence 378999999875 789999999999999999999999999999864
No 125
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.63 E-value=1.1e-06 Score=106.39 Aligned_cols=147 Identities=6% Similarity=-0.009 Sum_probs=90.2
Q ss_pred CCCCceeEEEEccC-hHHHHHHHHHHhCCCCeecCcccCCCcceeecCCCCCCCCCcceeeecCceEEEEEecCCcccCC
Q 007568 310 WPNAKYVYSIMTGS-MQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVIPTFSYFEFIPIHRRKQDC 388 (598)
Q Consensus 310 wP~l~~i~~~~~g~-~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~~~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~ 388 (598)
.+.+++ +.+|+ .....+++.+.+|+++++ +.||+||+.+.+...+...++..|. ..|+..-++..+.+.....
T Consensus 719 ~~slr~---~~g~gl~~~l~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~svG~-p~pg~~~v~i~~~d~~~g~- 792 (994)
T PRK07868 719 NHPVRL---FIGSGMPTGLWERVVEAFAPAHVV-EFFATTDGQAVLANVSGAKIGSKGR-PLPGAGRVELAAYDPEHDL- 792 (994)
T ss_pred CCceEE---EecCCCCHHHHHHHHHHhCchhee-eeeecccccccccccCCCCCcccCC-ccCCCCceeEEEecCcCCc-
Confidence 346774 33444 455667788888778999 9999999854322111111222333 2233212233222210000
Q ss_pred CCCCCCCCCCccccCCCCCCCCeEEEEEccc----------Ccee-----ccccCCEEEEccccCCCCEEEEEeecCceE
Q 007568 389 NSAIDDFIEDEPVPLSQVKLGQEYEIVLTSF----------TGLY-----RYRLGDVVEVAGFHKGTPKLNFVCRRKLIL 453 (598)
Q Consensus 389 ~~~~~~~~~~~~l~~~eve~G~~yeLVvTt~----------~Gl~-----RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l 453 (598)
.+. ++++. ..++++|+.|||.+... .|.+ -|+|||+++++. ...+.|+||.|+++
T Consensus 793 --li~-d~~G~---~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d~----dG~l~~~GR~dd~I 862 (994)
T PRK07868 793 --ILE-DDRGF---VRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRDD----DGDYWLVDRRGSVI 862 (994)
T ss_pred --eee-cCCce---EEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEcC----CCCEEEeccCCCEE
Confidence 000 01110 02357899999998542 2223 389999999984 78899999999999
Q ss_pred eeceeecCHHHHHHHHHHH
Q 007568 454 TVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 454 ~~~Gekv~e~~v~~av~~~ 472 (598)
++.|++|++.|||++|.+.
T Consensus 863 k~~G~~I~p~EIE~~L~~h 881 (994)
T PRK07868 863 RTARGPVYTEPVTDALGRI 881 (994)
T ss_pred EeCCceEcHHHHHHHHhcC
Confidence 9999999999999999864
No 126
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=98.59 E-value=7.1e-06 Score=89.97 Aligned_cols=229 Identities=17% Similarity=0.192 Sum_probs=133.6
Q ss_pred EEccChHHHHHHHHHHhCCCCeecCcccCCCccee-ecCCCCCCCCCccee--eecCceEEEEEecCCcccCCCCCCCCC
Q 007568 319 IMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIG-VNVDPSLPPEDVTFA--VIPTFSYFEFIPIHRRKQDCNSAIDDF 395 (598)
Q Consensus 319 ~~~g~~~~y~~~l~~~~g~~~i~~~~ygaSE~~i~-~~~~~~~~~~~~~~~--l~~~~~~~EFip~~~~~~~~~~~~~~~ 395 (598)
+..|--+...+.+.+.||-..|. +.||+|||.++ +|.+...-+ .++. +..-..=|+.|-.|+...+ .++ +
T Consensus 363 ~GNGLR~diW~~Fv~RFg~~~Ig-E~YgaTEgn~~~~N~d~~vGA--~G~~~~~~~~l~p~~LIk~D~~t~E---~iR-d 435 (649)
T KOG1179|consen 363 YGNGLRPDIWQQFVKRFGIIKIG-EFYGATEGNSNLVNYDGRVGA--CGFMSRLLKLLYPFRLIKVDPETGE---PIR-D 435 (649)
T ss_pred ecCCCCchHHHHHHHHcCCCeEE-EEeccccCcceeeeecCcccc--ccchhhhhhhccceEEEEecCCCCc---eee-c
Confidence 33333344445677788644455 99999999664 455543211 2232 1111123566666543211 010 1
Q ss_pred CCCccccCCCCCCCCeEEEEE--------cccCce-----------ec---------cccCCEEEEccccCCCCEEEEEe
Q 007568 396 IEDEPVPLSQVKLGQEYEIVL--------TSFTGL-----------YR---------YRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 396 ~~~~~l~~~eve~G~~yeLVv--------Tt~~Gl-----------~R---------Yr~GDvv~v~g~~~~~P~i~f~g 447 (598)
+++--+ -+++||.|.||= +.+.|+ +| |+|||+...+. -..+.|..
T Consensus 436 ~~G~Ci---~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~----~GylYF~D 508 (649)
T KOG1179|consen 436 SQGLCI---PCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADE----LGYLYFKD 508 (649)
T ss_pred CCceEE---ECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEec----CCcEEEec
Confidence 223322 367899997764 223332 22 89999998885 78899999
Q ss_pred ecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeec-cCCCCceEEEEEEecCCCccchHHHHHHHHHhhcC
Q 007568 448 RRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHAD-IVNQPGHYIIYWEIKGDVEEGVLNQCCHEMDVSFV 526 (598)
Q Consensus 448 R~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~-~~~~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~~l~ 526 (598)
|.+|...-.||+|+-.||++.+..... + .++.-|-|..+ .+++.+-=.+. + .+...-++.++...+...|
T Consensus 509 RtGDTFRWKGENVsTtEVe~~l~~~~~-~----~dv~VYGV~VP~~EGRaGMAaI~--~-~p~~~~d~~~l~~~l~~~L- 579 (649)
T KOG1179|consen 509 RTGDTFRWKGENVSTTEVEDVLSALDF-L----QDVNVYGVTVPGYEGRAGMAAIV--L-DPTTEKDLEKLYQHLRENL- 579 (649)
T ss_pred cCCCceeecCCcccHHHHHHHHhhhcc-c----cceeEEEEecCCccCccceEEEE--e-cCcccchHHHHHHHHHhhC-
Confidence 999999999999999999998886533 2 11223444322 22222221222 1 1112224555555555554
Q ss_pred CchhHhhhhcCCcCCeEEEEeccchHHHHHHHHhcCCCCCCCCCCCccc
Q 007568 527 DPGYVVSRRTNSIGPLELCIVKRGAFRMILDYFVGNGAALSQFKTPRCT 575 (598)
Q Consensus 527 n~~Y~~~R~~g~l~p~~v~~v~~g~f~~~~~~~~~~G~~~~Q~K~Pr~~ 575 (598)
|.|+.=|-.....- +=.-|||.......+..|-.+++++-|--+
T Consensus 580 -P~YA~P~FlRl~~~----i~~TgTFKl~K~~L~~egf~p~~~~dply~ 623 (649)
T KOG1179|consen 580 -PSYARPRFLRLQDE----IEKTGTFKLQKTELQKEGFNPAIISDPLYY 623 (649)
T ss_pred -ccccchHHHHHHhh----hhcccchhhHHHHHHHccCCccccCCceEE
Confidence 77877654432332 234699996666676779899999998753
No 127
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.56 E-value=3.5e-06 Score=95.08 Aligned_cols=231 Identities=12% Similarity=0.062 Sum_probs=131.3
Q ss_pred CCCceeEEEEccC---hHHHHHHHHHHhCCCCeecCcccCCCc-ceeecCCCCC-CCCCcceeeecCc-eEEEEEecCCc
Q 007568 311 PNAKYVYSIMTGS---MQHYLKKLRHYAGDLPLVSADYGSTES-WIGVNVDPSL-PPEDVTFAVIPTF-SYFEFIPIHRR 384 (598)
Q Consensus 311 P~l~~i~~~~~g~---~~~y~~~l~~~~g~~~i~~~~ygaSE~-~i~~~~~~~~-~~~~~~~~l~~~~-~~~EFip~~~~ 384 (598)
+.|+ ++.+.| -..-.+.+.+.++.-||. +.||.||. ..-+...+.. |. ..+..-.|.. ..++.+++
T Consensus 359 ~sLk---~~~S~Gepi~~~~~ew~~~~~~~~pv~-e~~~qtEtG~~~i~~~~g~~p~-~pg~~~~p~~g~~v~i~de--- 430 (626)
T KOG1175|consen 359 KSLR---TCGSVGEPINPEAWEWWKRVTGLDPIY-ETYGQTETGGICITPKPGKLPI-KPGSAGKPFPGYDVQILDE--- 430 (626)
T ss_pred ceEE---EEeecCccCCcchHHHHHHhcCccchh-hceeeeccCceeeeccCCCCCc-CccccCCCCCCcceEEECC---
Confidence 5577 445444 223334455666533677 99999996 3333322222 11 1122222222 23333332
Q ss_pred ccCCCCCCCCCCCCccccCCCCCCC-CeEEEEEccc------Cceec----------------cccCCEEEEccccCCCC
Q 007568 385 KQDCNSAIDDFIEDEPVPLSQVKLG-QEYEIVLTSF------TGLYR----------------YRLGDVVEVAGFHKGTP 441 (598)
Q Consensus 385 ~~~~~~~~~~~~~~~~l~~~eve~G-~~yeLVvTt~------~Gl~R----------------Yr~GDvv~v~g~~~~~P 441 (598)
++.. ++.+ +.+||+++.. .++|+ |.|||.++.+ +..
T Consensus 431 ------------~g~~-----~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd----~dG 489 (626)
T KOG1175|consen 431 ------------NGNE-----LPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRD----EDG 489 (626)
T ss_pred ------------CCCC-----cCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEc----CCc
Confidence 1333 3333 7889999543 33442 8899999999 489
Q ss_pred EEEEEeecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeeccCCCCceE-EEEEEecCCCccchHHHHHHH
Q 007568 442 KLNFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHADIVNQPGHY-IIYWEIKGDVEEGVLNQCCHE 520 (598)
Q Consensus 442 ~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~Y-~~~vE~~~~~~~~~l~~~~~~ 520 (598)
.+.+.||.||++|+.|-+++..|||+||.+--. +.|=.|+.-.....+.- ..||=+..+ .+..+++.++
T Consensus 490 Y~~i~GR~DDviNvsGhRigtaEIE~al~~hp~--------VaEsAvVg~p~~~~ge~v~aFvvl~~g--~~~~~~L~ke 559 (626)
T KOG1175|consen 490 YYWILGRVDDVINVSGHRIGTAEIESALVEHPA--------VAESAVVGSPDPIKGEVVLAFVVLKSG--SHDPEQLTKE 559 (626)
T ss_pred eEEEEecccccccccceeecHHHHHHHHhhCcc--------hhheeeecCCCCCCCeEEEEEEEEcCC--CCChHHHHHH
Confidence 999999999999999999999999999965322 22333332111112222 245545433 2233444445
Q ss_pred HHhhcCCchhHhhhhcCCcCCeEEE-Ee---ccchHHHHHHHHhcCCCCCCCCCCCcccCCHHHHHHHhhc
Q 007568 521 MDVSFVDPGYVVSRRTNSIGPLELC-IV---KRGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILNDW 587 (598)
Q Consensus 521 ld~~l~n~~Y~~~R~~g~l~p~~v~-~v---~~g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~ 587 (598)
|...+ +...|-++-|+.. .| +.=..-..+++.+.+-.+.-|++-.-.+.|+++++.+.+.
T Consensus 560 l~~~V-------R~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~d~st~~dp~v~~~~~~~ 623 (626)
T KOG1175|consen 560 LVKHV-------RSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVGDTSTLADPSVIDHLRSI 623 (626)
T ss_pred HHHHH-------HhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCccccccccCChHHHHHHHHh
Confidence 54443 1122334334433 33 2223455677766554444489999999999999999874
No 128
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.49 E-value=5.7e-06 Score=90.42 Aligned_cols=147 Identities=17% Similarity=0.224 Sum_probs=91.4
Q ss_pred CCceeEEEEccC--hHHHHHHHHHHhCCCCeecCcccCCCc-ceeecCCCCCCCCCcceeeec-CceEEEEEecCCcccC
Q 007568 312 NAKYVYSIMTGS--MQHYLKKLRHYAGDLPLVSADYGSTES-WIGVNVDPSLPPEDVTFAVIP-TFSYFEFIPIHRRKQD 387 (598)
Q Consensus 312 ~l~~i~~~~~g~--~~~y~~~l~~~~g~~~i~~~~ygaSE~-~i~~~~~~~~~~~~~~~~l~~-~~~~~EFip~~~~~~~ 387 (598)
+||+ +.+|| ..+-.+++-..+=.+|+. .+||-||. .-+.-.++++-. .+.+-.| ..+.+-.++.++..=.
T Consensus 403 ~lR~---~LsGGapLS~dtQrF~nic~C~Pv~-qGYGLTEtca~~tv~e~~d~~--~g~vG~pl~c~eiKLvdw~EgGY~ 476 (678)
T KOG1180|consen 403 NLRY---ILSGGAPLSPDTQRFMNICFCCPVL-QGYGLTETCAAATVLEPEDFS--TGRVGAPLPCCEIKLVDWEEGGYF 476 (678)
T ss_pred ceEE---EEeCCCCCCHHHHHHHHHhcccccc-ccccccchhcccEecChhhcc--cccccCCccceEEEEEEhhhcCcc
Confidence 6884 56666 334445554443246999 99999996 445544554321 1222111 2244445554432100
Q ss_pred CCCCCCCCCCCccccCCCCCCCCeEEEEEcc---cCcee-----------------ccccCCEEEEccccCCCCEEEEEe
Q 007568 388 CNSAIDDFIEDEPVPLSQVKLGQEYEIVLTS---FTGLY-----------------RYRLGDVVEVAGFHKGTPKLNFVC 447 (598)
Q Consensus 388 ~~~~~~~~~~~~~l~~~eve~G~~yeLVvTt---~~Gl~-----------------RYr~GDvv~v~g~~~~~P~i~f~g 447 (598)
.... | =+|||+|+. ..|+| .|+||||++++. ..+++++.
T Consensus 477 --------~~~~--------P-PrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~p----dG~LkIID 535 (678)
T KOG1180|consen 477 --------AKNK--------P-PRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHP----DGCLKIID 535 (678)
T ss_pred --------CCCC--------C-CCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecC----CCcEEEee
Confidence 0001 1 156888844 35555 499999999995 88999999
Q ss_pred ecCceEee-ceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeeccC
Q 007568 448 RRKLILTV-NIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHADIV 493 (598)
Q Consensus 448 R~~~~l~~-~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~ 493 (598)
|++|.+++ +||-|+-.-||.++.... -+-+.|+++|..
T Consensus 536 RKKdLVKlq~GEYIsL~KvEa~l~s~p--------~V~NICvyAd~~ 574 (678)
T KOG1180|consen 536 RKKDLVKLQNGEYISLGKVEAALRSSP--------YVDNICVYADSN 574 (678)
T ss_pred chhhhhhhcccceeehHHHHHHHhcCc--------chhheEEecccc
Confidence 99999875 599999999999887431 234678888853
No 129
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.19 E-value=9.4e-05 Score=79.55 Aligned_cols=86 Identities=16% Similarity=0.130 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHH-HhcCChHhHhhhcCccCCCCCCCcChHHHhhcCCCCCcccchHHHHHHhcCCCCCCccccccceee
Q 007568 32 GEVQRETLRRILE-QNYDVEYLKKRLGDTKIQDMDACEMETLYTSLVPLASHADLEPYIQRIADGDTASLLTQEPITKLS 110 (598)
Q Consensus 32 ~~~Q~~~L~~iL~-~n~~T~ygr~~~~~~~~~g~~~i~~~edF~~~vPl~~Yed~~p~ieR~~~Ge~~~ll~~~~i~~f~ 110 (598)
.+...+.++++.+ ++++++.+|++ .... |++ .++.++. .||..--.-|+.. .+... +.+.+....
T Consensus 30 ~~l~~~~~~~~~~~q~~~~~~Yr~~--~~~~-~~~--~~v~~~~-dIP~lPi~~FK~~--~L~S~------~~e~~~~~~ 95 (365)
T PF04443_consen 30 EELFLALALELFRYQYEHNPPYRKY--CDAL-GFD--EDVKDLE-DIPFLPIRFFKEH--ELLSV------PEEEVEKVF 95 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHH--HHHc-CCC--cccccHH-HCCcchHHHHhhc--eeeec------ChhhheeEE
Confidence 3445556666666 48999999999 4444 665 4556665 4777766666631 22221 234566788
Q ss_pred cccccCCCcccccccChhhHHH
Q 007568 111 LSSGTTEGRQKYVPFTKHSSQT 132 (598)
Q Consensus 111 ~TSGTT~G~~K~IP~T~~~l~~ 132 (598)
.||||| |.+-.|...+..+..
T Consensus 96 tSSGTt-G~~S~i~~D~~t~~~ 116 (365)
T PF04443_consen 96 TSSGTT-GQPSRIFRDRETAER 116 (365)
T ss_pred ECCCCC-CCCcEEEECHHHHHH
Confidence 999999 666667776655443
No 130
>PTZ00297 pantothenate kinase; Provisional
Probab=96.37 E-value=0.042 Score=68.83 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=38.8
Q ss_pred eEEEEEcccCceec--cccCCEEEEccccCCCCEEEEEeecCceEeec-eeecCHHHHHHHHHH
Q 007568 411 EYEIVLTSFTGLYR--YRLGDVVEVAGFHKGTPKLNFVCRRKLILTVN-IDKNTEKDLQLVVDR 471 (598)
Q Consensus 411 ~yeLVvTt~~Gl~R--Yr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~-Gekv~e~~v~~av~~ 471 (598)
.|||+|- .++ -.|+++. .|+. ....+.++||.+++++.. ||+|.++.||+.+..
T Consensus 825 ~GEIlvr----~~kdpe~T~e~~--~gW~-~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~ 881 (1452)
T PTZ00297 825 IGQLVLA----KKGEPRRTLPIA--AQWK-RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQ 881 (1452)
T ss_pred CCeEEEE----ECCChHHHHHhh--CcCc-cCCeEEEEeccccceECCCCcEEcHHHHHHHHhc
Confidence 4788882 121 2266642 3443 467999999999997765 899999999998864
No 131
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.18 E-value=0.031 Score=64.22 Aligned_cols=62 Identities=16% Similarity=0.293 Sum_probs=50.1
Q ss_pred CCCCCeEEEEEccc---Ccee--------------ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHH
Q 007568 406 VKLGQEYEIVLTSF---TGLY--------------RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLV 468 (598)
Q Consensus 406 ve~G~~yeLVvTt~---~Gl~--------------RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~a 468 (598)
+..|..+|+.|+.. .|++ -|+|||+++-. ....++|+||.+..++++|..|...+|+.+
T Consensus 562 ~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~----~dg~~e~lgr~D~qvki~g~Riel~eie~~ 637 (642)
T COG1020 562 LPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPL----ADGALEYLGRKDSQVKIRGFRIELGEIEAA 637 (642)
T ss_pred CCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeEC----CCCeEEEeccccceeEeceEecCcHHHHHH
Confidence 44688889999664 3432 39999999944 367999999999999999999999999887
Q ss_pred HHH
Q 007568 469 VDR 471 (598)
Q Consensus 469 v~~ 471 (598)
+..
T Consensus 638 l~~ 640 (642)
T COG1020 638 LAE 640 (642)
T ss_pred Hhc
Confidence 753
No 132
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=96.08 E-value=0.0061 Score=52.86 Aligned_cols=82 Identities=7% Similarity=0.009 Sum_probs=50.0
Q ss_pred eeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeeccCCCCceEEEEEEecCCCc--cchHHHHHHHHHhhcCCchhHhhh
Q 007568 457 IDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHADIVNQPGHYIIYWEIKGDVE--EGVLNQCCHEMDVSFVDPGYVVSR 534 (598)
Q Consensus 457 Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~Y~~~vE~~~~~~--~~~l~~~~~~ld~~l~n~~Y~~~R 534 (598)
|.+|+|.+|+++|.+... +. .+|.+............+.+|...+.. ...++.+.+.+.++|
T Consensus 1 GvnvfP~~Ie~vl~~~~~------~~-~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~l--------- 64 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPE------VS-PEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERL--------- 64 (96)
T ss_dssp TEEE-HHHHHHHHCTSTT------EE-EEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHH---------
T ss_pred CcEECHHHHHHHHHhCcC------CC-CcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHH---------
Confidence 789999999999987622 21 278776653333456668899865432 235666677777766
Q ss_pred hcCCcCCeEEEEeccchHHH
Q 007568 535 RTNSIGPLELCIVKRGAFRM 554 (598)
Q Consensus 535 ~~g~l~p~~v~~v~~g~f~~ 554 (598)
+...--.++|.+|++|++.+
T Consensus 65 k~~lgv~~~V~lv~~gtLpr 84 (96)
T PF14535_consen 65 KERLGVRPEVELVPPGTLPR 84 (96)
T ss_dssp HHHHSS-EEEEEE-TT-S--
T ss_pred HhhcCceEEEEEECCCCccC
Confidence 22222345999999999986
No 133
>PRK09188 serine/threonine protein kinase; Provisional
Probab=92.28 E-value=0.59 Score=50.50 Aligned_cols=40 Identities=10% Similarity=-0.015 Sum_probs=33.7
Q ss_pred ccccCCEEEEccccCCCCEEEEEeecCceEeece---eecCHHHHHHHHHHH
Q 007568 424 RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNI---DKNTEKDLQLVVDRG 472 (598)
Q Consensus 424 RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~G---ekv~e~~v~~av~~~ 472 (598)
.|+|||++++.+ ....+.|+||.+ +| ++|++. ||+++.+.
T Consensus 210 W~~TGDlg~~~d---~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~h 252 (365)
T PRK09188 210 WLATGKKVYNFI---TRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSD 252 (365)
T ss_pred EEeCCCEEEEEc---CCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhC
Confidence 589999999832 277899999998 78 899999 99988864
No 134
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=73.32 E-value=2.7 Score=50.99 Aligned_cols=45 Identities=20% Similarity=0.105 Sum_probs=40.8
Q ss_pred ccccCCEEEEccccCCCCEEEEEeecCceEeeceeecCHHHHHHHHHHH
Q 007568 424 RYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRG 472 (598)
Q Consensus 424 RYr~GDvv~v~g~~~~~P~i~f~gR~~~~l~~~Gekv~e~~v~~av~~~ 472 (598)
+|||||.+|..- ..-++|.||.++.++++|-++.=.++..++..-
T Consensus 455 ~y~tgD~gr~l~----ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~ 499 (1032)
T KOG1178|consen 455 IYRTGDNGRSLK----NGGLEISGRADRQIKDRGVRIELGELNTVVEVH 499 (1032)
T ss_pred cccccccceeec----CCCEEEEEeccceEEEccEEEehhhhchhhccC
Confidence 399999999883 778999999999999999999999999988765
No 135
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=53.11 E-value=39 Score=31.58 Aligned_cols=58 Identities=17% Similarity=0.238 Sum_probs=40.0
Q ss_pred CCCCCeEEEEEccc--Cceecc----ccCCEEEEccccCCCCEEEEEee----cCceEeeceeecCHHHH
Q 007568 406 VKLGQEYEIVLTSF--TGLYRY----RLGDVVEVAGFHKGTPKLNFVCR----RKLILTVNIDKNTEKDL 465 (598)
Q Consensus 406 ve~G~~yeLVvTt~--~Gl~RY----r~GDvv~v~g~~~~~P~i~f~gR----~~~~l~~~Gekv~e~~v 465 (598)
|.+|+.-+|.||.. +|-+++ .++|+=-|.+- ..|+|+|.+. .+.++.-+-|+++....
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dvRvvkdi--~pPRI~l~Y~L~d~~G~vi~~g~e~L~Dm~f 114 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDVRVVKDI--YPPRIELSYTLTDADGKVIKQGEEKLKDMGF 114 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcEEEEccC--CCCcEEEEEEEECCCCcEEEecceEEecchh
Confidence 67999999999995 897765 45665444454 3789887775 45556665567665444
No 136
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=50.92 E-value=69 Score=27.44 Aligned_cols=58 Identities=10% Similarity=0.121 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhhhhccCCeeeeeEEeeccCCCCceEEEEEEecCCCccchHHHHHHHHHhhc
Q 007568 462 EKDLQLVVDRGSQLLNKTGAELVDFTSHADIVNQPGHYIIYWEIKGDVEEGVLNQCCHEMDVSF 525 (598)
Q Consensus 462 e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~~l 525 (598)
+..+..++.-+.. .|+.+...-..+. ...++.|.+|||+.+. ..+.+.+..+.|.+.+
T Consensus 25 pGsL~~vL~~Fa~----~~INLt~IeSRP~-~~~~~~Y~FfVDieg~-~~~~~~~~l~~L~~~~ 82 (90)
T cd04931 25 VGALAKVLRLFEE----KDINLTHIESRPS-RLNKDEYEFFINLDKK-SAPALDPIIKSLRNDI 82 (90)
T ss_pred CcHHHHHHHHHHH----CCCCEEEEEeccC-CCCCceEEEEEEEEcC-CCHHHHHHHHHHHHHh
Confidence 4456667766544 6787776665543 3356789999999764 3345555666666655
No 137
>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. Eukaryotic AAAHs have an N-terminal ACT (regulatory) domain, a middle catalytic domain and a C-terminal domain which is responsible for the oligomeric state of the enzyme forming a domain-swapped tetrameric coiled-coil. The PAH, TH, and TPH enzymes contain highly conserved catalytic domains but distinct N-terminal ACT domains and differ in their mech
Probab=40.86 E-value=1.2e+02 Score=24.17 Aligned_cols=55 Identities=13% Similarity=0.241 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhhhhccCCeeeeeEEeeccCCCCceEEEEEEecCCCccchHHHHHHHHHh
Q 007568 464 DLQLVVDRGSQLLNKTGAELVDFTSHADIVNQPGHYIIYWEIKGDVEEGVLNQCCHEMDV 523 (598)
Q Consensus 464 ~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~ 523 (598)
.+..++.-+. ..|+.+......+. ...++.|.+|+|+.+..+....+.+.+.|++
T Consensus 12 ~L~~vL~~f~----~~~vni~~I~Srp~-~~~~~~~~f~id~~~~~~~~~~~~~l~~l~~ 66 (75)
T cd04880 12 ALAKALKVFA----ERGINLTKIESRPS-RKGLWEYEFFVDFEGHIDDPDVKEALEELKR 66 (75)
T ss_pred HHHHHHHHHH----HCCCCEEEEEeeec-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 4445554443 46887777655443 3356889999999765344455555555544
No 138
>PF01797 Y1_Tnp: Transposase IS200 like; InterPro: IPR002686 Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated; PDB: 2F5G_B 2F4F_B 2EC2_F 2XM3_C 2XQC_D 2XO6_A 2XMA_E 2VJV_B 2VIH_B 2VJU_A ....
Probab=37.86 E-value=1.4e+02 Score=26.01 Aligned_cols=102 Identities=11% Similarity=0.176 Sum_probs=55.2
Q ss_pred EEEeecCceEeeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeeccCCCCceEEEEEEecCCCccchHHHHHHHHHh
Q 007568 444 NFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHADIVNQPGHYIIYWEIKGDVEEGVLNQCCHEMDV 523 (598)
Q Consensus 444 ~f~gR~~~~l~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~ 523 (598)
.++-|.+.--.+..+. ..+.+.+.+...+. ..++.+.+|++.+| |+.++++...+. .++++...+..
T Consensus 7 hiv~~~~~r~~~~~~~-~~~~l~~~l~~~~~---~~~~~i~~~~vm~n------HvHllv~~~~~~---~is~~~~~lK~ 73 (121)
T PF01797_consen 7 HIVFRTKYRRPLFNDE-IREALLEILREICE---EYGIEIIAFVVMPN------HVHLLVSIPPKQ---SISKFMQRLKG 73 (121)
T ss_dssp EEEEEBGGGTSSSSHH-HHHHHHHHHHHHHH---HTTEEEEEEEEETT------EEEEEEEE-TTS----HHHHHHHHHH
T ss_pred EEEEeeeCCEeeeehh-eeeeeeeccccccc---cccceeeeecccCc------ccceeeeecccc---cchheeecccc
Confidence 3444444443344444 55666677777666 57899999998755 999999985432 34455444444
Q ss_pred hc---CCchhHhhhhc----CCc--CCeEEEEeccchHHHHHHH
Q 007568 524 SF---VDPGYVVSRRT----NSI--GPLELCIVKRGAFRMILDY 558 (598)
Q Consensus 524 ~l---~n~~Y~~~R~~----g~l--~p~~v~~v~~g~f~~~~~~ 558 (598)
.. .|..|...... |.+ ..-....+....+....++
T Consensus 74 ~~s~~~~k~~~~~~~~~~~~~~~Wq~~y~~~~i~~~~~~~~~~Y 117 (121)
T PF01797_consen 74 RSSRWINKEFPELKKRYFWRGHFWQRGYFDRSIRNESLDNVIRY 117 (121)
T ss_dssp HHHHHHHHHTHHHHHSCCT-TSSBESEEEEEEEBSSBHHHHHHH
T ss_pred cccccccccccceecccccccccccCCeEEEEECChhHHHHHHH
Confidence 22 24333332211 222 2244556666566655554
No 139
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=37.47 E-value=31 Score=26.68 Aligned_cols=19 Identities=32% Similarity=0.901 Sum_probs=15.3
Q ss_pred cccCCEEEEccccCCCCEEEEE
Q 007568 425 YRLGDVVEVAGFHKGTPKLNFV 446 (598)
Q Consensus 425 Yr~GDvv~v~g~~~~~P~i~f~ 446 (598)
|.+||+|+..+ +.|.+.+.
T Consensus 1 f~~GDvV~LKS---GGp~MTV~ 19 (53)
T PF09926_consen 1 FKIGDVVQLKS---GGPRMTVT 19 (53)
T ss_pred CCCCCEEEEcc---CCCCeEEE
Confidence 68999999997 58866555
No 140
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=36.57 E-value=25 Score=30.45 Aligned_cols=35 Identities=29% Similarity=0.531 Sum_probs=18.5
Q ss_pred eccccCCEEEEc---cccCCCCEEEEEeecCceEeece
Q 007568 423 YRYRLGDVVEVA---GFHKGTPKLNFVCRRKLILTVNI 457 (598)
Q Consensus 423 ~RYr~GDvv~v~---g~~~~~P~i~f~gR~~~~l~~~G 457 (598)
.-|..||.|-++ +++.+.|.=+|.||++.++...|
T Consensus 31 ~ey~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g 68 (98)
T COG2139 31 QEYKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRG 68 (98)
T ss_pred hhccCCCEEEEEeCcccccCCCCccccCcceEEEeccC
Confidence 345666666554 33334455556666665555444
No 141
>COG5475 Uncharacterized small protein [Function unknown]
Probab=34.94 E-value=40 Score=26.27 Aligned_cols=24 Identities=25% Similarity=0.469 Sum_probs=20.1
Q ss_pred cccCCEEEEccccCCCCEEEEEeecCc
Q 007568 425 YRLGDVVEVAGFHKGTPKLNFVCRRKL 451 (598)
Q Consensus 425 Yr~GDvv~v~g~~~~~P~i~f~gR~~~ 451 (598)
|.|||+|++.. +.|++.+.|=..|
T Consensus 5 FstgdvV~lKs---GGP~Mtvs~~ss~ 28 (60)
T COG5475 5 FSTGDVVTLKS---GGPRMTVSGYSSD 28 (60)
T ss_pred eecCcEEEeec---CCceEEEeccccC
Confidence 78999999997 6899988886653
No 142
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=31.79 E-value=34 Score=29.93 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=24.3
Q ss_pred eccccCCEEEEccc---cCCCCEEEEEeecCceEeecee
Q 007568 423 YRYRLGDVVEVAGF---HKGTPKLNFVCRRKLILTVNID 458 (598)
Q Consensus 423 ~RYr~GDvv~v~g~---~~~~P~i~f~gR~~~~l~~~Ge 458 (598)
--|+.||.|-+..- +.+.|.=.|.||++.+.++.|.
T Consensus 33 ~~y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~~ 71 (98)
T PRK04306 33 QEFEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRGR 71 (98)
T ss_pred HhccCCCEEEEEecCceecCCccccccCCCEEEEeecCe
Confidence 34888888877742 2345666788888877777654
No 143
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=28.39 E-value=42 Score=31.93 Aligned_cols=34 Identities=26% Similarity=0.512 Sum_probs=21.9
Q ss_pred ccccCCEEEEcc---ccCCCCEEEEEeecCceEeece
Q 007568 424 RYRLGDVVEVAG---FHKGTPKLNFVCRRKLILTVNI 457 (598)
Q Consensus 424 RYr~GDvv~v~g---~~~~~P~i~f~gR~~~~l~~~G 457 (598)
-|+.||+|-+.+ .+.+.|.=.|.||++.+.++.|
T Consensus 33 ~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~ 69 (160)
T PTZ00189 33 TFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTP 69 (160)
T ss_pred HccCCCEEEEEecCCeecCCCcccccCCCeEEEeecC
Confidence 377788777664 2235566677777777766654
No 144
>PRK13390 acyl-CoA synthetase; Provisional
Probab=27.33 E-value=29 Score=38.27 Aligned_cols=20 Identities=35% Similarity=0.212 Sum_probs=16.3
Q ss_pred cceeecccccCCCcccccccC
Q 007568 106 ITKLSLSSGTTEGRQKYVPFT 126 (598)
Q Consensus 106 i~~f~~TSGTT~G~~K~IP~T 126 (598)
+.+...||||| |.||.|..+
T Consensus 150 ~a~i~~TSGTT-G~PKgV~~~ 169 (501)
T PRK13390 150 GAVMLYSSGTT-GFPKGIQPD 169 (501)
T ss_pred cEEEEeCCCCC-CCCCEEEee
Confidence 35777899999 899998853
No 145
>cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme. The C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme, found in plants, fungi, bacteria, and archaea. The P-protein of E. coli (CM-PDT, PheA) catalyzes the conversion of chorismate to prephenate and then the decarboxylation and dehydration to form phenylpyruvate. These are the first two steps in the biosynthesis of L-Phe and L-Tyr via the shikimate pathway in microorganisms and plants. The E. coli P-protein (CM-PDT) has three domains with an N-terminal domain with chorismate mutase activity, a middle domain with prephenate dehydratase activity, and an ACT regulatory C-terminal domain. The prephenate dehydratase enzyme has a PDT and ACT domain. The ACT domain is essential to bring about the negative allosteric regulation by L-Phe bindi
Probab=25.49 E-value=3.5e+02 Score=21.88 Aligned_cols=45 Identities=16% Similarity=0.362 Sum_probs=27.5
Q ss_pred ccCCeeeeeEEeeccCCCCceEEEEEEecCCCccchHHHHHHHHHh
Q 007568 478 KTGAELVDFTSHADIVNQPGHYIIYWEIKGDVEEGVLNQCCHEMDV 523 (598)
Q Consensus 478 ~~g~~l~~f~~~~~~~~~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~ 523 (598)
..|+.+......+. ......|.++++.....+...+....+.|++
T Consensus 24 ~~~ini~~i~s~p~-~~~~~~~~f~vd~~~~~~~~~~~~~l~~l~~ 68 (80)
T cd04905 24 ERGINLTKIESRPS-KGGLWEYVFFIDFEGHIEDPNVAEALEELKR 68 (80)
T ss_pred HCCcCEEEEEEEEc-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 46777766655544 2345779999998655344455555555554
No 146
>PRK11899 prephenate dehydratase; Provisional
Probab=24.41 E-value=5.1e+02 Score=26.95 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhhhhccCCeeeeeEEeeccCCCCceEEEEEEecCCCccchHHHHHHHHHh
Q 007568 462 EKDLQLVVDRGSQLLNKTGAELVDFTSHADIVNQPGHYIIYWEIKGDVEEGVLNQCCHEMDV 523 (598)
Q Consensus 462 e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~ 523 (598)
+..+-.+|..+.. .|+.|.-....+ ....++.|.+|||+.+..+.+.+++..+.|.+
T Consensus 205 pGaL~~vL~~Fa~----~gINLtkIeSRP-~~~~~~~Y~F~id~eg~~~d~~v~~aL~~l~~ 261 (279)
T PRK11899 205 PAALYKALGGFAT----NGVNMTKLESYM-VGGSFTATQFYADIEGHPEDRNVALALEELRF 261 (279)
T ss_pred CChHHHHHHHHHH----cCCCeeeEEeee-cCCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 4556666666644 577776666554 34467899999999776444444444444443
No 147
>PF12401 DUF3662: Protein of unknown function (DUF2662) ; InterPro: IPR022128 This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with PF00498 from PFAM. ; PDB: 2LC0_A.
Probab=24.40 E-value=27 Score=31.40 Aligned_cols=88 Identities=11% Similarity=0.088 Sum_probs=38.7
Q ss_pred eeceeecCHHHHHHHHHHHHhhhhccCCeeeeeEEeeccCCCCceEEEEEEecCCCccchHHHHHHHHHhhcCCchhHhh
Q 007568 454 TVNIDKNTEKDLQLVVDRGSQLLNKTGAELVDFTSHADIVNQPGHYIIYWEIKGDVEEGVLNQCCHEMDVSFVDPGYVVS 533 (598)
Q Consensus 454 ~~~Gekv~e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~~l~n~~Y~~~ 533 (598)
++++-.|-+.||..+|.+.+.. ++.. +..+..--|-+|++.+-.. |-+.+..+.+.|.+.|...-.+..
T Consensus 18 r~F~~~vqPvEIa~~L~remd~----~a~~----~~~~r~~aPN~y~V~Ls~~---D~~~l~~~~~~l~~el~~~l~~~a 86 (116)
T PF12401_consen 18 RVFRSEVQPVEIAKALRREMDD----QARV----VSRGRTLAPNVYTVELSPE---DYERLSPWGDRLARELADYLAEHA 86 (116)
T ss_dssp HHHTTSS-THHHHHHHHHHHHH----T-B-------TT--B---EEEEEEEHH---HHHHH-S-SHHHHHHHHHHHHHHH
T ss_pred HhcCCCCcHHHHHHHHHHHHHh----CCee----cCCCCEEcCeeEEEEECHH---HHHHHhhhHHHHHHHHHHHHHHHH
Confidence 3456668899999999998762 1111 1111111366898665321 111111111222222211112333
Q ss_pred hhcC--CcCCeEEEEeccchH
Q 007568 534 RRTN--SIGPLELCIVKRGAF 552 (598)
Q Consensus 534 R~~g--~l~p~~v~~v~~g~f 552 (598)
++.| ..+|+.|++.....+
T Consensus 87 ~~qgy~~~G~v~V~~~~d~~L 107 (116)
T PF12401_consen 87 REQGYTFVGPVTVEFEEDPDL 107 (116)
T ss_dssp HHHT-B-SS--EEEEEEETTS
T ss_pred HHCCCeecCCEEEEEEECCCC
Confidence 4444 589999999876543
No 148
>PLN00190 60S ribosomal protein L21; Provisional
Probab=23.98 E-value=56 Score=31.06 Aligned_cols=34 Identities=26% Similarity=0.553 Sum_probs=23.0
Q ss_pred ccccCCEEEEcc---ccCCCCEEEEEeecCceEeece
Q 007568 424 RYRLGDVVEVAG---FHKGTPKLNFVCRRKLILTVNI 457 (598)
Q Consensus 424 RYr~GDvv~v~g---~~~~~P~i~f~gR~~~~l~~~G 457 (598)
-|+.||+|-+.+ ++.+.|.=.|.||++.+.++.|
T Consensus 33 ~yk~GD~VdIk~~~svqKGMPhk~YHGkTG~V~nv~~ 69 (158)
T PLN00190 33 TFKVGDYVDIKVNGAIHKGMPHKFYHGRTGIVWNVTK 69 (158)
T ss_pred HhcCCCEEEEEecCCeecCCCcccccCCCeEEEeecC
Confidence 478888887764 2335566677788777776664
No 149
>cd04866 LigD_Pol_like_3 LigD_Pol_like_3: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 3. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated repair DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=23.40 E-value=58 Score=32.80 Aligned_cols=46 Identities=24% Similarity=0.424 Sum_probs=29.9
Q ss_pred ccccceeecccccCCCcccccccC-hh-hHHHHHHHHHHHHHHHHhcCC
Q 007568 103 QEPITKLSLSSGTTEGRQKYVPFT-KH-SSQTTLQIFRLAAAYRSRVYP 149 (598)
Q Consensus 103 ~~~i~~f~~TSGTT~G~~K~IP~T-~~-~l~~~~~~~~~~~~~~~~~~P 149 (598)
.-.+..|.+|||++ |-+-++|.. .+ ..+....+.......+.+..|
T Consensus 124 ~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~~r~fa~~iA~~l~~~~P 171 (223)
T cd04866 124 ALGLTSFVKTSGNK-GLQVYIPLPDNKFTYDETRLFTEFIAEYLCQQFP 171 (223)
T ss_pred HcCCccceEccCCC-eEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHCc
Confidence 34477899999999 899999999 43 233333333333444556666
No 150
>PRK13391 acyl-CoA synthetase; Provisional
Probab=23.28 E-value=68 Score=35.52 Aligned_cols=20 Identities=45% Similarity=0.416 Sum_probs=15.9
Q ss_pred cceeecccccCCCcccccccC
Q 007568 106 ITKLSLSSGTTEGRQKYVPFT 126 (598)
Q Consensus 106 i~~f~~TSGTT~G~~K~IP~T 126 (598)
..++..||||| |.||-+-.+
T Consensus 156 ~a~il~TSGtT-G~PKgv~~~ 175 (511)
T PRK13391 156 GTDMLYSSGTT-GRPKGIKRP 175 (511)
T ss_pred ccEEEECCCCC-CCCCEEEEc
Confidence 34677899999 899988644
No 151
>cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe; TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines; and TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxy
Probab=22.91 E-value=3e+02 Score=22.16 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhhhhccCCeeeeeEEeeccCCCCceEEEEEEecC
Q 007568 462 EKDLQLVVDRGSQLLNKTGAELVDFTSHADIVNQPGHYIIYWEIKG 507 (598)
Q Consensus 462 e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~Y~~~vE~~~ 507 (598)
+..+.+++..+. ..|+.+...-..+ ....++.|.+|||+.+
T Consensus 11 pG~L~~vL~~f~----~~~iNlt~IeSRP-~~~~~~~y~Ffvd~~~ 51 (74)
T cd04904 11 VGALARALKLFE----EFGVNLTHIESRP-SRRNGSEYEFFVDCEV 51 (74)
T ss_pred CcHHHHHHHHHH----HCCCcEEEEECCC-CCCCCceEEEEEEEEc
Confidence 344555665553 4677777665544 3345788999999975
No 152
>PRK11898 prephenate dehydratase; Provisional
Probab=22.34 E-value=4.7e+02 Score=27.17 Aligned_cols=57 Identities=14% Similarity=0.328 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhhhhccCCeeeeeEEeeccCCCCceEEEEEEecCCCccchHHHHHHHHHh
Q 007568 462 EKDLQLVVDRGSQLLNKTGAELVDFTSHADIVNQPGHYIIYWEIKGDVEEGVLNQCCHEMDV 523 (598)
Q Consensus 462 e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~ 523 (598)
+..+.++|.-+.. .|+.|...-..+ ....++.|.+|||+.+..+.+.+++..+.|.+
T Consensus 208 pGsL~~~L~~F~~----~~INLt~IeSRP-~~~~~~~y~F~vd~eg~~~~~~~~~al~~L~~ 264 (283)
T PRK11898 208 PGALYKALSEFAW----RGINLTRIESRP-TKTGLGTYFFFIDVEGHIDDVLVAEALKELEA 264 (283)
T ss_pred ccHHHHHHHHHHH----CCCCeeeEeccc-CCCCCccEEEEEEEEccCCCHHHHHHHHHHHH
Confidence 4457777766644 677777666554 33456889999999766554445555455544
No 153
>COG0077 PheA Prephenate dehydratase [Amino acid transport and metabolism]
Probab=21.53 E-value=5.8e+02 Score=26.70 Aligned_cols=57 Identities=18% Similarity=0.375 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhhhhccCCeeeeeEEeeccCCCCceEEEEEEecCCCccchHHHHHHHHHh
Q 007568 462 EKDLQLVVDRGSQLLNKTGAELVDFTSHADIVNQPGHYIIYWEIKGDVEEGVLNQCCHEMDV 523 (598)
Q Consensus 462 e~~v~~av~~~~~~l~~~g~~l~~f~~~~~~~~~~~~Y~~~vE~~~~~~~~~l~~~~~~ld~ 523 (598)
+..+..+|..+. +.|+.+.-.-.. +....++.|.+|||+.+..+...+++..++|.+
T Consensus 205 PGaL~~~L~~Fa----~~gINlTkIESR-P~k~~~~~Y~F~iD~eg~~~~~~v~~AL~el~~ 261 (279)
T COG0077 205 PGALYKALGVFA----KRGINLTKIESR-PLKTGLGEYLFFIDIEGHIDDPLVKEALEELKE 261 (279)
T ss_pred CchHHHHHHHHH----HcCcceeeEeec-ccCCCCeeEEEEEEEecCcCcHhHHHHHHHHHh
Confidence 444555555543 467766544433 334468899999999776665455544444443
Done!