Query 007571
Match_columns 598
No_of_seqs 441 out of 2309
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 05:05:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007571.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007571hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.8 3.9E-18 1.3E-22 151.7 15.1 103 386-496 11-113 (126)
2 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 5.3E-18 1.8E-22 182.3 14.0 164 326-496 207-383 (457)
3 3rkv_A Putative peptidylprolyl 99.7 1.7E-17 5.7E-22 150.7 14.1 111 383-496 6-129 (162)
4 2hr2_A Hypothetical protein; a 99.7 3E-17 1E-21 155.6 16.3 111 385-498 8-136 (159)
5 1p5q_A FKBP52, FK506-binding p 99.7 1.6E-17 5.6E-22 171.1 12.4 164 326-496 86-262 (336)
6 2if4_A ATFKBP42; FKBP-like, al 99.7 1.6E-18 5.6E-23 179.0 4.2 165 327-497 115-297 (338)
7 4gcn_A Protein STI-1; structur 99.7 3.6E-16 1.2E-20 138.7 14.6 107 385-496 5-115 (127)
8 3upv_A Heat shock protein STI1 99.7 6E-15 2.1E-19 127.7 18.4 101 387-495 3-103 (126)
9 3sz7_A HSC70 cochaperone (SGT) 99.6 6E-14 2.1E-18 127.4 19.0 104 386-497 9-112 (164)
10 3gyz_A Chaperone protein IPGC; 99.6 2.5E-14 8.7E-19 132.5 15.8 103 386-496 34-136 (151)
11 3q49_B STIP1 homology and U bo 99.6 7.3E-14 2.5E-18 121.2 17.3 127 387-529 8-134 (137)
12 2fbn_A 70 kDa peptidylprolyl i 99.6 8E-14 2.7E-18 130.4 17.4 122 369-496 22-154 (198)
13 2xcb_A PCRH, regulatory protei 99.5 2.7E-13 9.2E-18 121.0 16.7 102 387-496 17-118 (142)
14 2vgx_A Chaperone SYCD; alterna 99.5 1.8E-13 6.3E-18 124.5 15.5 102 387-496 20-121 (148)
15 1ihg_A Cyclophilin 40; ppiase 99.5 1.9E-13 6.6E-18 143.6 16.7 113 381-496 216-339 (370)
16 4ga2_A E3 SUMO-protein ligase 99.5 2.8E-13 9.5E-18 123.1 12.7 103 386-496 29-132 (150)
17 1a17_A Serine/threonine protei 99.5 5.1E-12 1.8E-16 111.8 19.7 104 385-496 10-113 (166)
18 2c2l_A CHIP, carboxy terminus 99.5 1.2E-12 4.1E-17 131.1 16.6 103 388-498 4-106 (281)
19 1elw_A TPR1-domain of HOP; HOP 99.4 1.8E-12 6.1E-17 107.4 14.4 102 387-496 3-104 (118)
20 2lni_A Stress-induced-phosphop 99.4 4.2E-12 1.4E-16 108.0 15.4 102 387-496 15-116 (133)
21 1hxi_A PEX5, peroxisome target 99.4 2.4E-12 8.3E-17 113.2 13.9 98 391-496 20-117 (121)
22 2vyi_A SGTA protein; chaperone 99.4 1.4E-11 4.8E-16 103.6 16.2 104 385-496 9-112 (131)
23 1elr_A TPR2A-domain of HOP; HO 99.4 9.4E-12 3.2E-16 104.9 15.1 101 387-495 3-110 (131)
24 2dba_A Smooth muscle cell asso 99.4 8.4E-12 2.9E-16 108.3 15.1 105 387-496 27-131 (148)
25 3urz_A Uncharacterized protein 99.4 6.1E-12 2.1E-16 119.6 13.7 102 388-497 4-121 (208)
26 2xev_A YBGF; tetratricopeptide 99.4 1.2E-11 4.2E-16 105.9 14.2 102 390-496 4-108 (129)
27 2l6j_A TPR repeat-containing p 99.4 9.3E-13 3.2E-17 109.8 6.9 94 387-488 3-102 (111)
28 4gyw_A UDP-N-acetylglucosamine 99.3 9.7E-12 3.3E-16 142.2 17.3 103 386-496 41-143 (723)
29 2pl2_A Hypothetical conserved 99.3 1.2E-11 4E-16 118.4 14.7 101 388-496 5-116 (217)
30 4i17_A Hypothetical protein; T 99.3 1.7E-11 5.7E-16 116.1 15.2 101 388-496 7-108 (228)
31 3vtx_A MAMA; tetratricopeptide 99.3 4.6E-11 1.6E-15 109.0 16.0 100 388-495 5-104 (184)
32 3vtx_A MAMA; tetratricopeptide 99.3 4.2E-11 1.4E-15 109.3 14.9 101 388-496 73-173 (184)
33 3urz_A Uncharacterized protein 99.3 7E-11 2.4E-15 112.3 16.8 97 392-496 58-189 (208)
34 2pl2_A Hypothetical conserved 99.3 4E-11 1.4E-15 114.7 14.9 100 387-494 38-148 (217)
35 1na0_A Designed protein CTPR3; 99.3 2.2E-10 7.4E-15 95.4 16.7 101 388-496 9-109 (125)
36 4gyw_A UDP-N-acetylglucosamine 99.3 2.8E-11 9.7E-16 138.4 14.9 104 386-497 7-110 (723)
37 2h6f_A Protein farnesyltransfe 99.2 4.5E-11 1.5E-15 126.6 13.6 108 381-496 124-232 (382)
38 4ga2_A E3 SUMO-protein ligase 99.2 6.1E-12 2.1E-16 114.2 5.7 95 394-496 3-97 (150)
39 3k9i_A BH0479 protein; putativ 99.2 1.3E-11 4.4E-16 106.4 7.3 89 400-496 2-93 (117)
40 3uq3_A Heat shock protein STI1 99.2 2.4E-10 8.3E-15 107.4 16.5 102 386-495 137-238 (258)
41 2e2e_A Formate-dependent nitri 99.2 3.8E-10 1.3E-14 102.8 17.3 102 388-497 44-148 (177)
42 1hh8_A P67PHOX, NCF-2, neutrop 99.2 1.2E-10 4.1E-15 108.2 14.3 101 388-496 37-153 (213)
43 1wao_1 Serine/threonine protei 99.2 3.2E-11 1.1E-15 130.6 11.9 103 386-496 4-106 (477)
44 2h6f_A Protein farnesyltransfe 99.2 4.8E-11 1.6E-15 126.3 12.7 101 388-496 97-198 (382)
45 2kck_A TPR repeat; tetratricop 99.2 8.8E-11 3E-15 96.5 11.5 102 389-496 7-109 (112)
46 2gw1_A Mitochondrial precursor 99.2 1.3E-10 4.3E-15 121.0 14.9 103 385-496 3-105 (514)
47 1xnf_A Lipoprotein NLPI; TPR, 99.2 4.9E-10 1.7E-14 106.9 17.5 103 386-496 41-143 (275)
48 3qky_A Outer membrane assembly 99.2 4.8E-10 1.6E-14 108.7 17.5 110 387-498 14-131 (261)
49 1hh8_A P67PHOX, NCF-2, neutrop 99.2 2.3E-10 7.9E-15 106.3 13.9 101 386-497 4-104 (213)
50 4i17_A Hypothetical protein; T 99.2 2.5E-10 8.5E-15 108.0 13.4 100 389-496 43-149 (228)
51 1zu2_A Mitochondrial import re 99.2 7.5E-11 2.6E-15 111.6 9.2 89 400-496 14-123 (158)
52 3fp2_A TPR repeat-containing p 99.1 3.5E-10 1.2E-14 118.8 14.9 104 384-496 21-124 (537)
53 2yhc_A BAMD, UPF0169 lipoprote 99.1 1.1E-09 3.9E-14 104.8 16.1 106 388-498 4-130 (225)
54 2kat_A Uncharacterized protein 99.1 6.5E-10 2.2E-14 94.7 12.8 84 405-496 2-85 (115)
55 3ieg_A DNAJ homolog subfamily 99.1 2.1E-09 7.3E-14 105.4 18.1 106 387-496 233-338 (359)
56 3qky_A Outer membrane assembly 99.1 1.4E-09 4.8E-14 105.4 16.5 104 388-496 52-180 (261)
57 3as5_A MAMA; tetratricopeptide 99.1 2.4E-09 8.2E-14 95.0 16.7 101 388-496 42-142 (186)
58 2fo7_A Synthetic consensus TPR 99.1 1.6E-09 5.5E-14 90.6 14.5 99 390-496 3-101 (136)
59 3ieg_A DNAJ homolog subfamily 99.1 8.3E-10 2.9E-14 108.4 14.8 100 388-495 3-102 (359)
60 3uq3_A Heat shock protein STI1 99.1 2.6E-09 8.8E-14 100.4 17.3 102 386-496 3-111 (258)
61 4eqf_A PEX5-related protein; a 99.1 1.2E-09 4.2E-14 109.8 15.1 102 388-497 65-166 (365)
62 1fch_A Peroxisomal targeting s 99.1 2.4E-09 8.2E-14 106.8 16.8 102 388-497 217-318 (368)
63 2fo7_A Synthetic consensus TPR 99.1 2.9E-09 9.8E-14 89.0 14.5 101 388-496 35-135 (136)
64 1na3_A Designed protein CTPR2; 99.1 2.3E-09 7.8E-14 86.1 13.2 84 387-478 8-91 (91)
65 3u4t_A TPR repeat-containing p 99.1 1.7E-09 5.7E-14 103.6 14.5 100 390-494 39-138 (272)
66 4eqf_A PEX5-related protein; a 99.1 1.3E-09 4.4E-14 109.7 14.2 103 388-498 213-315 (365)
67 3as5_A MAMA; tetratricopeptide 99.1 3.4E-09 1.2E-13 94.0 15.3 103 388-498 76-178 (186)
68 2vsy_A XCC0866; transferase, g 99.1 2.9E-09 9.8E-14 115.8 17.6 101 388-496 23-123 (568)
69 1fch_A Peroxisomal targeting s 99.1 5.5E-09 1.9E-13 104.2 18.2 103 388-498 64-166 (368)
70 2q7f_A YRRB protein; TPR, prot 99.0 4.9E-09 1.7E-13 98.1 16.6 101 387-495 90-190 (243)
71 4abn_A Tetratricopeptide repea 99.0 1.4E-09 4.9E-14 116.9 14.7 100 389-496 171-290 (474)
72 2vq2_A PILW, putative fimbrial 99.0 7.7E-09 2.6E-13 95.0 17.2 100 388-495 42-144 (225)
73 1p5q_A FKBP52, FK506-binding p 99.0 3.4E-09 1.2E-13 108.9 16.4 102 385-494 193-295 (336)
74 4gco_A Protein STI-1; structur 99.0 1.3E-09 4.4E-14 96.5 11.2 81 386-474 45-125 (126)
75 2kc7_A BFR218_protein; tetratr 99.0 1.1E-09 3.8E-14 90.4 9.9 90 392-497 4-94 (99)
76 2y4t_A DNAJ homolog subfamily 99.0 2.6E-09 8.9E-14 109.8 14.6 103 386-496 24-126 (450)
77 2q7f_A YRRB protein; TPR, prot 99.0 4.7E-09 1.6E-13 98.2 15.1 102 387-496 124-225 (243)
78 2pzi_A Probable serine/threoni 99.0 4.8E-10 1.6E-14 126.3 9.5 102 386-496 465-566 (681)
79 1a17_A Serine/threonine protei 99.0 6.7E-09 2.3E-13 91.6 15.0 101 388-496 47-149 (166)
80 3ro3_A PINS homolog, G-protein 99.0 6E-09 2.1E-13 89.9 14.3 112 386-497 7-122 (164)
81 3cv0_A Peroxisome targeting si 99.0 1.3E-08 4.6E-13 98.9 18.1 138 388-534 172-309 (327)
82 1w3b_A UDP-N-acetylglucosamine 99.0 3.4E-09 1.2E-13 107.8 14.3 102 387-496 66-167 (388)
83 3hym_B Cell division cycle pro 99.0 1.9E-08 6.7E-13 97.9 18.9 100 389-496 160-268 (330)
84 2vq2_A PILW, putative fimbrial 99.0 1.3E-08 4.6E-13 93.4 16.5 102 386-495 74-178 (225)
85 2pzi_A Probable serine/threoni 99.0 1.1E-09 3.6E-14 123.6 10.8 101 387-496 432-532 (681)
86 3gyz_A Chaperone protein IPGC; 99.0 1.3E-09 4.6E-14 100.6 9.5 81 409-497 23-103 (151)
87 2ho1_A Type 4 fimbrial biogene 99.0 7.7E-09 2.6E-13 98.0 15.0 102 387-496 70-173 (252)
88 2y4t_A DNAJ homolog subfamily 99.0 1.1E-08 3.6E-13 105.3 17.3 106 387-496 256-361 (450)
89 4abn_A Tetratricopeptide repea 99.0 3.5E-09 1.2E-13 113.9 14.2 101 387-496 101-211 (474)
90 3u4t_A TPR repeat-containing p 99.0 5.1E-09 1.7E-13 100.1 13.8 101 388-496 74-174 (272)
91 3cv0_A Peroxisome targeting si 99.0 1.4E-08 4.8E-13 98.8 16.9 103 388-498 21-123 (327)
92 2ho1_A Type 4 fimbrial biogene 99.0 1.1E-08 3.9E-13 96.8 15.7 103 386-496 103-207 (252)
93 1w3b_A UDP-N-acetylglucosamine 98.9 1E-08 3.6E-13 104.1 15.8 102 387-496 202-303 (388)
94 3ro2_A PINS homolog, G-protein 98.9 2.2E-08 7.6E-13 96.5 16.9 108 387-498 4-117 (338)
95 3hym_B Cell division cycle pro 98.9 1.3E-08 4.4E-13 99.2 15.3 102 388-497 125-226 (330)
96 2e2e_A Formate-dependent nitri 98.9 1.1E-09 3.7E-14 99.8 7.1 95 394-496 16-113 (177)
97 4gcn_A Protein STI-1; structur 98.9 6.4E-09 2.2E-13 91.7 11.7 71 424-497 5-75 (127)
98 2yhc_A BAMD, UPF0169 lipoprote 98.9 1.4E-08 4.6E-13 97.2 14.8 104 388-496 41-179 (225)
99 2r5s_A Uncharacterized protein 98.9 7.2E-09 2.4E-13 95.2 12.1 104 384-496 36-140 (176)
100 3ma5_A Tetratricopeptide repea 98.9 5.3E-09 1.8E-13 88.3 9.8 72 418-497 3-74 (100)
101 4a1s_A PINS, partner of inscut 98.9 2.1E-08 7.3E-13 102.0 16.1 107 386-496 46-158 (411)
102 1qqe_A Vesicular transport pro 98.9 1.9E-08 6.6E-13 100.3 15.4 113 386-498 75-192 (292)
103 3mkr_A Coatomer subunit epsilo 98.9 1.6E-08 5.6E-13 101.8 14.8 113 398-535 176-289 (291)
104 2vgx_A Chaperone SYCD; alterna 98.9 3.3E-09 1.1E-13 96.3 8.5 80 409-496 8-87 (148)
105 1qqe_A Vesicular transport pro 98.9 1.2E-08 4.1E-13 101.8 13.4 112 386-497 35-151 (292)
106 2qfc_A PLCR protein; TPR, HTH, 98.9 1.7E-08 5.9E-13 100.1 14.1 109 387-496 154-269 (293)
107 3qou_A Protein YBBN; thioredox 98.9 1.8E-08 6E-13 100.9 14.2 102 388-497 117-252 (287)
108 3edt_B KLC 2, kinesin light ch 98.9 1.8E-08 6.1E-13 95.4 13.5 105 386-495 41-158 (283)
109 3sf4_A G-protein-signaling mod 98.9 3.2E-08 1.1E-12 99.3 15.8 107 387-497 8-120 (406)
110 2vsy_A XCC0866; transferase, g 98.9 2.5E-08 8.4E-13 108.4 15.6 104 387-498 56-162 (568)
111 3fp2_A TPR repeat-containing p 98.9 5.2E-08 1.8E-12 102.3 17.4 103 388-498 310-412 (537)
112 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 2.1E-08 7.3E-13 107.5 14.5 93 386-486 315-407 (457)
113 1xnf_A Lipoprotein NLPI; TPR, 98.8 3.1E-08 1.1E-12 94.3 14.1 93 400-496 17-109 (275)
114 3u3w_A Transcriptional activat 98.8 1.5E-08 5.3E-13 100.5 12.3 112 387-498 154-271 (293)
115 3edt_B KLC 2, kinesin light ch 98.8 1.5E-08 5.2E-13 95.9 11.1 106 386-496 83-201 (283)
116 3ro3_A PINS homolog, G-protein 98.8 4.5E-08 1.5E-12 84.3 13.1 110 387-496 48-161 (164)
117 2vyi_A SGTA protein; chaperone 98.8 3.5E-08 1.2E-12 82.5 11.9 85 388-480 46-130 (131)
118 2fbn_A 70 kDa peptidylprolyl i 98.8 3.3E-08 1.1E-12 92.1 12.4 97 388-492 88-185 (198)
119 3ulq_A Response regulator aspa 98.8 5.1E-08 1.8E-12 99.7 14.8 114 385-498 140-258 (383)
120 3gw4_A Uncharacterized protein 98.8 3.5E-08 1.2E-12 90.1 11.8 110 387-496 25-139 (203)
121 3ulq_A Response regulator aspa 98.8 3.8E-08 1.3E-12 100.7 13.1 109 386-497 182-297 (383)
122 3rkv_A Putative peptidylprolyl 98.8 3.7E-08 1.3E-12 88.8 11.6 88 385-480 60-148 (162)
123 2xcb_A PCRH, regulatory protei 98.8 1.7E-08 5.8E-13 89.6 8.9 80 409-496 5-84 (142)
124 4g1t_A Interferon-induced prot 98.8 6.5E-08 2.2E-12 100.5 14.6 110 387-496 50-170 (472)
125 2lni_A Stress-induced-phosphop 98.8 4.6E-08 1.6E-12 82.7 11.0 84 388-479 50-133 (133)
126 3n71_A Histone lysine methyltr 98.8 1.8E-07 6E-12 102.7 18.1 120 377-496 298-425 (490)
127 3sf4_A G-protein-signaling mod 98.7 1.7E-07 5.9E-12 93.9 16.2 109 386-497 185-300 (406)
128 2ifu_A Gamma-SNAP; membrane fu 98.7 4.8E-08 1.6E-12 98.1 12.0 104 388-496 116-226 (307)
129 3q15_A PSP28, response regulat 98.7 7.9E-08 2.7E-12 98.5 13.8 110 386-498 180-295 (378)
130 3sz7_A HSC70 cochaperone (SGT) 98.7 5.1E-08 1.7E-12 88.1 10.9 81 387-475 44-124 (164)
131 3upv_A Heat shock protein STI1 98.7 8.6E-08 3E-12 82.4 11.9 83 387-477 37-125 (126)
132 3nf1_A KLC 1, kinesin light ch 98.7 6.3E-08 2.2E-12 93.4 11.6 108 386-496 151-310 (311)
133 3k9i_A BH0479 protein; putativ 98.7 9.3E-08 3.2E-12 82.0 11.3 73 386-466 25-97 (117)
134 3u3w_A Transcriptional activat 98.7 1.7E-07 5.7E-12 93.0 14.7 111 388-498 115-230 (293)
135 2qfc_A PLCR protein; TPR, HTH, 98.7 3.7E-07 1.3E-11 90.5 17.2 110 387-496 114-228 (293)
136 3ro2_A PINS homolog, G-protein 98.7 1E-07 3.5E-12 91.8 12.5 112 385-496 180-295 (338)
137 1ihg_A Cyclophilin 40; ppiase 98.7 1.4E-07 4.8E-12 98.9 14.1 93 385-485 270-362 (370)
138 2xpi_A Anaphase-promoting comp 98.7 2.4E-07 8.1E-12 99.0 16.0 101 388-496 373-473 (597)
139 2l6j_A TPR repeat-containing p 98.7 5E-08 1.7E-12 80.8 8.3 68 427-497 4-71 (111)
140 1wao_1 Serine/threonine protei 98.7 2.1E-08 7E-13 108.6 7.5 103 387-497 39-154 (477)
141 2xpi_A Anaphase-promoting comp 98.7 2.7E-07 9.1E-12 98.6 16.0 101 388-496 407-507 (597)
142 3nf1_A KLC 1, kinesin light ch 98.7 1.7E-07 5.9E-12 90.4 12.8 107 385-496 66-185 (311)
143 1na0_A Designed protein CTPR3; 98.6 3.7E-07 1.3E-11 75.6 12.9 83 388-478 43-125 (125)
144 3ma5_A Tetratricopeptide repea 98.6 1.2E-07 4.1E-12 79.9 10.0 85 387-477 6-90 (100)
145 2ifu_A Gamma-SNAP; membrane fu 98.6 8.7E-08 3E-12 96.3 10.7 113 385-498 73-189 (307)
146 2r5s_A Uncharacterized protein 98.6 2.4E-07 8.4E-12 84.9 12.9 85 402-494 88-174 (176)
147 2gw1_A Mitochondrial precursor 98.6 1E-07 3.5E-12 99.0 11.5 106 388-496 372-481 (514)
148 3q15_A PSP28, response regulat 98.6 2.4E-07 8E-12 95.0 13.9 112 385-496 138-254 (378)
149 4a1s_A PINS, partner of inscut 98.6 1.5E-07 5.1E-12 95.7 12.2 111 386-496 221-335 (411)
150 2ond_A Cleavage stimulation fa 98.6 2.8E-07 9.6E-12 92.2 13.7 84 405-496 81-166 (308)
151 2if4_A ATFKBP42; FKBP-like, al 98.6 3.4E-08 1.2E-12 101.7 7.1 101 389-497 231-332 (338)
152 1elw_A TPR1-domain of HOP; HOP 98.6 6.3E-07 2.1E-11 73.6 12.1 79 388-474 38-116 (118)
153 3mkr_A Coatomer subunit epsilo 98.6 6.7E-07 2.3E-11 89.9 14.5 100 388-497 130-233 (291)
154 1na3_A Designed protein CTPR2; 98.6 5.6E-07 1.9E-11 71.9 11.2 68 426-496 8-75 (91)
155 3qww_A SET and MYND domain-con 98.5 7.8E-07 2.7E-11 96.1 15.1 118 379-496 289-414 (433)
156 3q49_B STIP1 homology and U bo 98.5 6.9E-07 2.4E-11 76.8 11.9 67 427-496 9-75 (137)
157 2c2l_A CHIP, carboxy terminus 98.5 3.6E-07 1.2E-11 91.2 11.5 105 387-496 37-167 (281)
158 2kat_A Uncharacterized protein 98.5 8E-07 2.7E-11 75.4 11.9 86 388-479 19-104 (115)
159 1ouv_A Conserved hypothetical 98.5 1.2E-06 4E-11 84.9 14.5 98 385-494 35-144 (273)
160 3gw4_A Uncharacterized protein 98.5 1.1E-06 3.7E-11 80.1 13.3 112 386-498 64-181 (203)
161 3qou_A Protein YBBN; thioredox 98.5 3.8E-07 1.3E-11 91.1 11.0 96 391-494 188-285 (287)
162 2ond_A Cleavage stimulation fa 98.5 7.7E-07 2.6E-11 89.0 13.1 96 390-493 136-232 (308)
163 4g1t_A Interferon-induced prot 98.5 3.8E-07 1.3E-11 94.7 11.2 102 387-496 246-366 (472)
164 1hxi_A PEX5, peroxisome target 98.5 1.3E-06 4.5E-11 76.3 12.8 66 428-496 18-83 (121)
165 2hr2_A Hypothetical protein; a 98.5 2.7E-07 9.2E-12 87.3 8.8 68 387-459 56-134 (159)
166 2v5f_A Prolyl 4-hydroxylase su 98.5 7.9E-07 2.7E-11 76.3 11.0 81 388-471 5-87 (104)
167 2kck_A TPR repeat; tetratricop 98.5 1.8E-07 6.1E-12 76.4 6.5 71 418-496 2-72 (112)
168 2dba_A Smooth muscle cell asso 98.5 9.1E-07 3.1E-11 76.3 11.2 80 387-474 64-143 (148)
169 1dce_A Protein (RAB geranylger 98.5 1.5E-06 5E-11 96.7 14.8 105 385-497 60-177 (567)
170 2kc7_A BFR218_protein; tetratr 98.4 1.4E-06 4.8E-11 71.5 10.8 64 430-496 3-67 (99)
171 1zu2_A Mitochondrial import re 98.4 2.7E-07 9.1E-12 87.3 6.9 69 386-459 34-123 (158)
172 2xev_A YBGF; tetratricopeptide 98.4 3.8E-06 1.3E-10 71.3 13.1 81 388-473 39-119 (129)
173 3qwp_A SET and MYND domain-con 98.4 3.1E-06 1.1E-10 91.0 15.5 111 386-496 285-403 (429)
174 1dce_A Protein (RAB geranylger 98.4 2E-06 7E-11 95.5 14.3 105 385-497 25-142 (567)
175 1ouv_A Conserved hypothetical 98.4 4.2E-06 1.4E-10 81.0 14.5 96 386-493 72-179 (273)
176 3dra_A Protein farnesyltransfe 98.4 2.5E-06 8.5E-11 88.1 13.0 108 381-496 60-178 (306)
177 1hz4_A MALT regulatory protein 98.3 9.5E-06 3.3E-10 81.9 16.0 110 387-496 13-125 (373)
178 3q7a_A Farnesyltransferase alp 98.3 2.9E-06 9.9E-11 89.5 12.2 109 381-497 81-200 (349)
179 1hz4_A MALT regulatory protein 98.3 6.9E-06 2.4E-10 83.0 14.5 104 391-494 96-204 (373)
180 1elr_A TPR2A-domain of HOP; HO 98.3 6.4E-06 2.2E-10 68.8 11.5 69 426-497 3-71 (131)
181 3dra_A Protein farnesyltransfe 98.2 6E-06 2E-10 85.3 11.7 103 387-497 102-219 (306)
182 3dss_A Geranylgeranyl transfer 98.2 1.4E-05 4.7E-10 83.7 14.0 107 384-498 104-227 (331)
183 2ooe_A Cleavage stimulation fa 98.2 1.3E-05 4.5E-10 86.0 13.7 102 387-496 271-388 (530)
184 3rjv_A Putative SEL1 repeat pr 98.2 1.3E-05 4.5E-10 76.2 12.1 92 389-493 19-118 (212)
185 3rjv_A Putative SEL1 repeat pr 98.1 1.3E-05 4.4E-10 76.3 11.1 100 388-494 85-198 (212)
186 3n71_A Histone lysine methyltr 98.1 2.4E-05 8.2E-10 85.7 14.3 111 385-496 348-467 (490)
187 3bee_A Putative YFRE protein; 98.1 4.2E-05 1.4E-09 65.1 12.3 71 418-496 2-75 (93)
188 3dss_A Geranylgeranyl transfer 98.1 3E-05 1E-09 81.1 13.5 99 390-496 31-142 (331)
189 4f3v_A ESX-1 secretion system 98.1 2E-05 6.9E-10 80.8 11.8 102 390-496 137-240 (282)
190 1pc2_A Mitochondria fission pr 98.0 5.4E-05 1.9E-09 71.1 12.0 85 404-496 14-103 (152)
191 3q7a_A Farnesyltransferase alp 98.0 5E-05 1.7E-09 80.1 13.0 89 400-496 66-157 (349)
192 1klx_A Cysteine rich protein B 98.0 6.2E-05 2.1E-09 67.4 11.8 89 394-494 31-127 (138)
193 4b4t_Q 26S proteasome regulato 97.9 5.3E-05 1.8E-09 77.6 12.5 134 390-533 6-157 (434)
194 2ooe_A Cleavage stimulation fa 97.9 5.5E-05 1.9E-09 81.2 13.0 97 391-495 324-422 (530)
195 4b4t_Q 26S proteasome regulato 97.9 0.00014 4.6E-09 74.5 13.9 112 387-498 54-169 (434)
196 4f3v_A ESX-1 secretion system 97.8 3.8E-05 1.3E-09 78.7 9.0 96 391-493 105-200 (282)
197 3ly7_A Transcriptional activat 97.7 0.00041 1.4E-08 73.8 14.4 106 387-496 195-342 (372)
198 2xm6_A Protein corresponding t 97.6 0.00045 1.5E-08 73.3 14.0 96 388-495 328-434 (490)
199 3bee_A Putative YFRE protein; 97.6 0.00023 7.8E-09 60.5 9.4 67 388-459 6-75 (93)
200 2xm6_A Protein corresponding t 97.6 0.00066 2.3E-08 72.0 14.5 95 387-493 74-180 (490)
201 3e4b_A ALGK; tetratricopeptide 97.6 0.00024 8.3E-09 75.6 10.5 86 392-491 217-314 (452)
202 1pc2_A Mitochondria fission pr 97.4 0.00059 2E-08 64.0 9.6 76 388-470 32-111 (152)
203 3u64_A Protein TP_0956; tetrat 97.4 0.00078 2.7E-08 69.6 11.2 88 404-496 179-272 (301)
204 2v5f_A Prolyl 4-hydroxylase su 97.4 0.0014 4.9E-08 55.7 11.1 70 427-496 5-78 (104)
205 1xi4_A Clathrin heavy chain; a 97.3 0.0019 6.4E-08 78.7 15.0 96 385-490 1102-1221(1630)
206 1klx_A Cysteine rich protein B 97.2 0.00086 3E-08 59.8 8.6 78 402-493 9-90 (138)
207 3qwp_A SET and MYND domain-con 97.2 0.0013 4.5E-08 70.6 11.5 89 385-477 326-426 (429)
208 3ffl_A Anaphase-promoting comp 97.1 0.003 1E-07 60.1 11.4 97 390-486 22-144 (167)
209 3mv2_B Coatomer subunit epsilo 97.1 0.0045 1.5E-07 64.2 13.6 117 392-536 180-308 (310)
210 3qww_A SET and MYND domain-con 97.1 0.0018 6.1E-08 69.9 10.9 71 385-456 337-411 (433)
211 3e4b_A ALGK; tetratricopeptide 97.1 0.0017 5.7E-08 69.2 10.6 91 389-493 284-387 (452)
212 1nzn_A CGI-135 protein, fissio 96.9 0.0065 2.2E-07 55.3 10.9 84 405-496 18-106 (126)
213 1xi4_A Clathrin heavy chain; a 96.8 0.0054 1.8E-07 74.8 11.9 96 392-495 1053-1165(1630)
214 1b89_A Protein (clathrin heavy 96.8 0.0018 6.3E-08 70.4 7.1 91 390-495 124-238 (449)
215 3mv2_B Coatomer subunit epsilo 96.7 0.0069 2.4E-07 62.8 11.1 100 391-495 103-209 (310)
216 3nmw_A APC variant protein; AR 96.6 9.8E-05 3.3E-09 77.6 -3.6 118 20-137 41-202 (354)
217 4hxt_A De novo protein OR329; 96.5 0.00058 2E-08 64.8 1.2 113 13-137 4-117 (252)
218 2ff4_A Probable regulatory pro 96.4 0.06 2.1E-06 56.8 15.6 105 388-495 115-236 (388)
219 4db8_A Armadillo-repeat protei 96.0 0.0024 8.1E-08 61.3 2.4 118 11-140 12-130 (252)
220 4db6_A Armadillo repeat protei 95.7 0.0068 2.3E-07 56.5 4.1 96 30-137 31-127 (210)
221 3ly7_A Transcriptional activat 95.7 0.045 1.5E-06 58.1 10.6 66 388-459 277-342 (372)
222 2z6g_A B-catenin; FULL-length, 95.6 0.0016 5.6E-08 74.7 -0.8 65 73-137 409-474 (780)
223 2z6h_A Catenin beta-1, beta-ca 95.5 0.0013 4.5E-08 73.1 -1.9 66 73-138 273-339 (644)
224 3ffl_A Anaphase-promoting comp 95.4 0.044 1.5E-06 52.1 8.3 84 387-474 62-165 (167)
225 3txn_A 26S proteasome regulato 95.3 0.1 3.5E-06 55.7 11.9 104 393-496 104-213 (394)
226 4db8_A Armadillo-repeat protei 95.1 0.016 5.5E-07 55.3 4.5 96 30-137 115-211 (252)
227 4b8j_A Importin subunit alpha- 95.0 0.045 1.5E-06 58.6 8.3 97 30-138 222-318 (528)
228 3nmz_A APC variant protein; pr 94.9 0.0044 1.5E-07 67.4 -0.1 96 31-137 220-318 (458)
229 4hxt_A De novo protein OR329; 94.8 0.013 4.3E-07 55.5 3.0 96 30-137 63-159 (252)
230 4db6_A Armadillo repeat protei 94.8 0.021 7.1E-07 53.1 4.3 66 72-138 21-86 (210)
231 1nzn_A CGI-135 protein, fissio 94.8 0.12 4.2E-06 46.9 9.1 74 389-469 36-113 (126)
232 3o48_A Mitochondria fission 1 94.7 0.1 3.6E-06 47.8 8.5 73 390-469 42-117 (134)
233 1xm9_A Plakophilin 1; armadill 94.5 0.052 1.8E-06 58.0 6.9 111 24-145 15-126 (457)
234 1y8m_A FIS1; mitochondria, unk 94.4 0.52 1.8E-05 43.7 12.5 71 390-467 41-114 (144)
235 3tpo_A Importin subunit alpha- 94.3 0.028 9.7E-07 61.0 4.6 98 31-139 96-195 (529)
236 1b89_A Protein (clathrin heavy 94.2 0.11 3.6E-06 56.6 8.7 104 386-494 146-273 (449)
237 4e6h_A MRNA 3'-END-processing 94.0 0.63 2.2E-05 52.9 14.8 98 391-493 346-463 (679)
238 1xqr_A HSPBP1 protein; armadil 93.9 0.029 9.8E-07 57.4 3.3 94 31-136 145-239 (296)
239 3o48_A Mitochondria fission 1 93.8 0.56 1.9E-05 43.0 11.3 86 427-524 40-128 (134)
240 4b4t_R RPN7, 26S proteasome re 93.3 0.2 6.8E-06 53.5 8.8 106 388-495 131-239 (429)
241 4gns_B Protein CSD3, chitin bi 93.3 1.3 4.3E-05 51.2 15.8 61 388-453 337-397 (754)
242 1wa5_B Importin alpha subunit; 93.3 0.15 5E-06 54.9 7.7 96 30-137 234-330 (530)
243 4e6h_A MRNA 3'-END-processing 93.2 0.38 1.3E-05 54.6 11.3 82 405-494 326-408 (679)
244 3tt9_A Plakophilin-2; cell adh 93.2 0.097 3.3E-06 51.9 5.7 105 30-145 29-134 (233)
245 1y8m_A FIS1; mitochondria, unk 93.0 0.91 3.1E-05 42.1 11.5 68 427-496 39-109 (144)
246 3u64_A Protein TP_0956; tetrat 92.6 0.51 1.8E-05 48.7 10.2 68 387-459 198-272 (301)
247 2jdq_A Importin alpha-1 subuni 92.5 0.29 9.9E-06 50.3 8.3 96 30-137 169-265 (450)
248 3l6x_A Catenin delta-1; cateni 92.2 0.059 2E-06 60.4 2.9 104 31-145 68-173 (584)
249 3ul1_B Importin subunit alpha- 92.2 0.1 3.5E-06 56.5 4.6 99 31-140 77-177 (510)
250 4b8j_A Importin subunit alpha- 91.6 0.086 2.9E-06 56.4 3.1 96 31-137 94-191 (528)
251 4gns_B Protein CSD3, chitin bi 91.2 0.47 1.6E-05 54.7 8.9 61 428-495 338-398 (754)
252 1wa5_B Importin alpha subunit; 90.4 0.12 4E-06 55.6 2.8 62 76-138 144-205 (530)
253 4h7y_A Dual specificity protei 90.4 2.8 9.4E-05 39.5 11.6 88 405-496 36-126 (161)
254 3tpo_A Importin subunit alpha- 90.0 0.32 1.1E-05 52.6 5.9 110 31-151 140-254 (529)
255 4b4t_P 26S proteasome regulato 89.8 8.8 0.0003 41.0 16.9 110 387-496 136-250 (445)
256 3ul1_B Importin subunit alpha- 89.2 0.59 2E-05 50.4 7.2 111 30-151 120-235 (510)
257 3nmw_A APC variant protein; AR 89.2 0.11 3.7E-06 54.4 1.3 97 31-139 238-338 (354)
258 1jdh_A Beta-catenin; beta-cate 89.0 0.74 2.5E-05 48.5 7.6 105 31-144 286-394 (529)
259 4g26_A Pentatricopeptide repea 89.0 6.3 0.00022 42.7 15.2 98 390-495 107-206 (501)
260 2jdq_A Importin alpha-1 subuni 88.9 0.44 1.5E-05 49.0 5.7 67 71-137 115-181 (450)
261 3nmz_A APC variant protein; pr 88.7 0.19 6.3E-06 54.6 2.8 100 30-137 306-410 (458)
262 1xm9_A Plakophilin 1; armadill 88.0 0.28 9.4E-06 52.4 3.5 61 75-136 14-74 (457)
263 1xqr_A HSPBP1 protein; armadil 86.6 0.52 1.8E-05 48.0 4.4 123 4-136 24-155 (296)
264 1zbp_A Hypothetical protein VP 86.3 7.4 0.00025 39.6 12.6 59 396-459 5-63 (273)
265 1jdh_A Beta-catenin; beta-cate 83.5 0.85 2.9E-05 48.0 4.5 103 30-143 120-223 (529)
266 1ya0_A SMG-7 transcript varian 83.2 5.6 0.00019 43.6 10.9 99 389-495 153-261 (497)
267 2uy1_A Cleavage stimulation fa 83.1 3.4 0.00012 44.6 9.2 100 385-493 11-118 (493)
268 1jvw_A Macrophage infectivity 81.9 0.095 3.2E-06 49.5 -3.2 55 326-383 99-155 (167)
269 2uy1_A Cleavage stimulation fa 81.7 18 0.00061 38.9 14.2 102 390-496 215-352 (493)
270 3kae_A CDC27, possible protein 80.9 20 0.0007 34.6 12.4 92 393-494 38-144 (242)
271 3now_A UNC-45 protein, SD10334 80.8 0.71 2.4E-05 53.6 2.9 98 30-138 555-655 (810)
272 3tt9_A Plakophilin-2; cell adh 80.8 1.2 3.9E-05 44.1 4.0 64 82-146 29-93 (233)
273 3o5e_A Peptidyl-prolyl CIS-tra 79.3 0.052 1.8E-06 49.7 -5.8 41 326-366 99-141 (144)
274 4g26_A Pentatricopeptide repea 77.7 12 0.00041 40.5 11.2 85 402-494 84-170 (501)
275 2v6y_A AAA family ATPase, P60 77.4 4.9 0.00017 33.4 6.3 33 385-417 8-40 (83)
276 2f4e_A ATFKBP42; FKBP-like, al 77.2 0.059 2E-06 51.4 -6.4 56 326-381 114-175 (180)
277 2z6h_A Catenin beta-1, beta-ca 76.7 1.7 5.9E-05 47.9 4.3 105 30-145 117-222 (644)
278 3l6x_A Catenin delta-1; cateni 76.2 3.6 0.00012 46.0 6.7 63 74-137 59-121 (584)
279 2z6g_A B-catenin; FULL-length, 76.0 1.7 5.8E-05 49.7 4.1 106 30-146 253-359 (780)
280 1zbp_A Hypothetical protein VP 75.1 16 0.00054 37.2 10.5 59 435-496 5-63 (273)
281 2ff4_A Probable regulatory pro 72.4 17 0.00059 37.8 10.5 62 388-454 171-232 (388)
282 2w2u_A Hypothetical P60 katani 72.4 6.5 0.00022 32.8 5.8 34 384-417 15-48 (83)
283 3txn_A 26S proteasome regulato 72.1 37 0.0012 36.0 12.9 68 427-495 99-170 (394)
284 4dip_A Peptidyl-prolyl CIS-tra 71.0 0.12 4.1E-06 45.7 -5.6 41 326-366 80-121 (125)
285 4fhn_B Nucleoporin NUP120; pro 69.6 14 0.00048 44.1 10.0 97 392-488 846-962 (1139)
286 3ax2_A Mitochondrial import re 69.3 18 0.00062 29.6 7.6 37 385-421 14-50 (73)
287 3b7x_A FK506-binding protein 6 69.2 0.12 4.2E-06 46.6 -6.0 40 326-365 90-131 (134)
288 2pbc_A FK506-binding protein 2 69.1 0.15 5E-06 43.4 -5.3 42 326-367 54-97 (102)
289 3kz7_A FK506-binding protein 3 69.0 0.14 4.9E-06 44.7 -5.5 39 326-364 75-116 (119)
290 3mkq_A Coatomer beta'-subunit; 69.0 20 0.0007 39.3 10.6 55 427-484 681-743 (814)
291 3o5q_A Peptidyl-prolyl CIS-tra 68.9 0.14 4.9E-06 45.6 -5.6 41 326-366 83-125 (128)
292 3mkq_A Coatomer beta'-subunit; 68.6 54 0.0018 35.9 13.9 81 388-489 681-761 (814)
293 1ya0_A SMG-7 transcript varian 68.6 14 0.00047 40.4 9.0 63 427-492 152-214 (497)
294 3now_A UNC-45 protein, SD10334 67.8 2.6 9E-05 48.9 3.2 58 79-138 511-568 (810)
295 3jxv_A 70 kDa peptidyl-prolyl 67.7 0.27 9.4E-06 51.3 -4.6 42 326-367 187-235 (356)
296 2vn1_A 70 kDa peptidylprolyl i 66.9 0.13 4.5E-06 45.8 -6.2 41 326-366 83-125 (129)
297 2awg_A 38 kDa FK-506 binding p 66.2 0.15 5.2E-06 44.7 -5.9 39 326-364 74-114 (118)
298 1yat_A FK506 binding protein; 64.4 0.19 6.5E-06 43.6 -5.6 38 326-363 70-109 (113)
299 2jwx_A FKBP38NTD, FK506-bindin 64.3 0.26 8.7E-06 46.1 -5.0 41 326-366 104-147 (157)
300 2ppn_A FK506-binding protein 1 64.0 0.19 6.5E-06 43.0 -5.6 38 326-363 64-103 (107)
301 3oe2_A Peptidyl-prolyl CIS-tra 64.0 0.22 7.5E-06 49.1 -5.8 41 326-366 175-217 (219)
302 3jxv_A 70 kDa peptidyl-prolyl 63.1 1.5 5.2E-05 45.6 0.0 42 326-367 75-118 (356)
303 4a5x_A MITD1, MIT domain-conta 63.0 11 0.00039 31.5 5.4 32 386-417 14-45 (86)
304 2y78_A Peptidyl-prolyl CIS-tra 61.7 0.26 8.9E-06 44.5 -5.4 38 326-363 91-130 (133)
305 2v6x_A Vacuolar protein sortin 61.6 13 0.00043 30.8 5.4 33 385-417 10-42 (85)
306 2vkj_A TM1634; membrane protei 61.3 26 0.00089 30.1 7.2 37 385-421 50-86 (106)
307 1wfd_A Hypothetical protein 15 60.5 13 0.00045 31.5 5.4 33 385-417 12-44 (93)
308 3spa_A Mtrpol, DNA-directed RN 60.4 1E+02 0.0035 37.1 14.6 99 389-495 128-232 (1134)
309 2lgo_A FKBP; infectious diseas 59.0 0.35 1.2E-05 43.4 -5.0 37 326-362 88-126 (130)
310 3uf8_A Ubiquitin-like protein 57.7 0.36 1.2E-05 47.0 -5.6 38 326-363 167-206 (209)
311 2d9f_A FK506-binding protein 8 57.6 0.15 5E-06 46.1 -7.8 42 326-367 78-122 (135)
312 2cpt_A SKD1 protein, vacuolar 57.5 15 0.0005 32.6 5.4 33 385-417 15-47 (117)
313 3mkq_B Coatomer subunit alpha; 57.2 66 0.0022 30.5 10.2 81 388-489 34-114 (177)
314 4b4t_R RPN7, 26S proteasome re 56.6 16 0.00054 38.7 6.5 72 427-498 131-202 (429)
315 1r9h_A FKB-6, FK506 binding pr 55.7 0.33 1.1E-05 43.8 -5.8 42 326-367 78-121 (135)
316 3mkr_B Coatomer subunit alpha; 54.9 56 0.0019 33.9 10.0 102 391-495 105-229 (320)
317 3mv2_A Coatomer subunit alpha; 52.0 40 0.0014 35.0 8.4 102 392-496 118-239 (325)
318 1fd9_A Protein (macrophage inf 50.8 0.64 2.2E-05 45.5 -5.1 41 326-366 167-209 (213)
319 1q6h_A FKBP-type peptidyl-prol 49.7 0.6 2E-05 46.1 -5.5 39 326-364 182-221 (224)
320 1oyz_A Hypothetical protein YI 48.6 22 0.00076 34.1 5.7 49 76-134 172-220 (280)
321 2wb7_A PT26-6P; extra chromoso 46.8 56 0.0019 35.9 8.8 62 356-417 395-461 (526)
322 4b4t_S RPN3, 26S proteasome re 44.3 51 0.0017 36.4 8.2 71 426-498 230-304 (523)
323 1u79_A FKBP-type peptidyl-prol 44.2 0.49 1.7E-05 42.2 -6.6 37 327-363 82-125 (129)
324 1om2_A Protein (mitochondrial 43.9 36 0.0012 29.3 5.5 37 385-421 17-53 (95)
325 2crb_A Nuclear receptor bindin 43.3 38 0.0013 29.2 5.4 31 386-416 13-43 (97)
326 4h7y_A Dual specificity protei 42.5 61 0.0021 30.4 7.2 54 401-459 73-126 (161)
327 1oyz_A Hypothetical protein YI 42.3 14 0.00047 35.6 3.0 57 74-142 34-90 (280)
328 1q1c_A FK506-binding protein 4 41.2 0.91 3.1E-05 46.0 -5.9 42 326-367 115-158 (280)
329 2crb_A Nuclear receptor bindin 39.0 84 0.0029 27.1 6.9 32 464-495 15-46 (97)
330 2w2u_A Hypothetical P60 katani 38.8 93 0.0032 25.7 7.2 26 470-495 25-50 (83)
331 3opb_A SWI5-dependent HO expre 38.2 23 0.00078 41.0 4.4 59 96-156 447-506 (778)
332 1qsa_A Protein (soluble lytic 36.7 1E+02 0.0035 34.4 9.3 91 393-492 257-347 (618)
333 1te4_A Conserved protein MTH18 35.8 16 0.00056 31.3 2.1 49 75-135 54-102 (131)
334 1q1c_A FK506-binding protein 4 35.7 1.3 4.6E-05 44.8 -5.6 42 326-367 229-273 (280)
335 2v6y_A AAA family ATPase, P60 35.5 94 0.0032 25.5 6.7 25 471-495 18-42 (83)
336 4fhn_B Nucleoporin NUP120; pro 35.2 1.3E+02 0.0043 35.9 10.3 92 396-496 820-931 (1139)
337 2cfu_A SDSA1; SDS-hydrolase, l 35.2 96 0.0033 34.8 8.8 63 374-441 431-497 (658)
338 4a5x_A MITD1, MIT domain-conta 32.7 1.2E+02 0.0041 25.1 6.9 30 466-495 18-47 (86)
339 3ltj_A Alpharep-4; protein eng 32.7 28 0.00095 31.5 3.3 50 74-135 87-136 (201)
340 1wfd_A Hypothetical protein 15 32.5 1.2E+02 0.004 25.5 6.9 28 468-495 19-46 (93)
341 2v6x_A Vacuolar protein sortin 32.1 1.3E+02 0.0043 24.6 6.9 28 468-495 17-44 (85)
342 3opb_A SWI5-dependent HO expre 30.6 19 0.00064 41.7 2.0 52 83-135 477-530 (778)
343 3ltm_A Alpha-REP4; protein eng 28.9 41 0.0014 30.6 3.8 49 75-135 31-79 (211)
344 3t5x_A PCI domain-containing p 28.8 2.1E+02 0.0073 27.0 9.0 59 386-444 12-70 (203)
345 1te4_A Conserved protein MTH18 28.8 41 0.0014 28.7 3.5 51 72-135 21-71 (131)
346 3t5v_B Nuclear mRNA export pro 28.3 87 0.003 33.8 6.7 95 403-497 141-254 (455)
347 3mkq_B Coatomer subunit alpha; 28.0 1.1E+02 0.0037 28.9 6.5 26 427-452 34-59 (177)
348 3ax2_A Mitochondrial import re 27.9 85 0.0029 25.6 5.0 29 468-496 21-49 (73)
349 3myv_A SUSD superfamily protei 27.5 1.1E+02 0.0037 32.4 7.2 31 426-456 189-219 (454)
350 2cpt_A SKD1 protein, vacuolar 27.2 1.5E+02 0.0052 26.0 6.9 29 468-496 22-50 (117)
351 1om2_A Protein (mitochondrial 26.9 1.2E+02 0.0042 25.9 6.0 28 469-496 25-52 (95)
352 1wy6_A Hypothetical protein ST 26.5 2.2E+02 0.0074 26.6 7.9 83 400-495 73-156 (172)
353 2wpv_A GET4, UPF0363 protein Y 26.0 5.3E+02 0.018 26.2 12.3 26 463-488 133-158 (312)
354 3lpz_A GET4 (YOR164C homolog); 25.4 5.8E+02 0.02 26.4 13.3 103 385-487 32-159 (336)
355 2ijq_A Hypothetical protein; s 25.0 4E+02 0.014 24.7 9.7 65 391-455 35-103 (161)
356 3kez_A Putative sugar binding 24.5 1.2E+02 0.0042 32.1 6.9 30 426-455 195-224 (461)
357 3ltm_A Alpha-REP4; protein eng 24.4 65 0.0022 29.2 4.3 51 73-135 91-141 (211)
358 4b4t_S RPN3, 26S proteasome re 24.3 1.1E+02 0.0039 33.7 6.7 71 387-459 230-302 (523)
359 4gq2_M Nucleoporin NUP120; bet 23.8 1.5E+02 0.005 34.8 8.0 66 392-457 844-927 (950)
360 3mcx_A SUSD superfamily protei 23.3 1.2E+02 0.004 32.3 6.6 32 426-457 201-232 (477)
361 3lew_A SUSD-like carbohydrate 23.1 1.4E+02 0.0047 32.1 7.1 31 426-456 202-232 (495)
362 2cfu_A SDSA1; SDS-hydrolase, l 22.6 1.5E+02 0.0052 33.2 7.5 53 428-483 450-502 (658)
363 1u6g_C TIP120 protein, CAND1; 22.4 3.5E+02 0.012 31.7 11.0 193 61-283 53-267 (1230)
364 4b4t_P 26S proteasome regulato 21.8 5.9E+02 0.02 26.7 11.7 70 386-456 175-247 (445)
365 2lkn_A AH receptor-interacting 21.1 16 0.00056 34.2 -0.6 39 294-345 58-96 (165)
366 3snx_A SUSD homolog, putative 20.3 1.4E+02 0.0047 31.8 6.4 30 426-455 190-219 (460)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.77 E-value=3.9e-18 Score=151.68 Aligned_cols=103 Identities=23% Similarity=0.254 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
+.+..++++|+.+|++|+|++|+..|++||+++|.+ +.+|.|+|.||+++|++++|+.++++||+++|+ +++
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---~~~ 82 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN-----AILYSNRAACLTKLMEFQRALDDCDTCIRLDSK---FIK 82 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh---hhH
Confidence 468899999999999999999999999999999999 999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+|+++|.+|..+|++++|+.+|++++++.|+
T Consensus 83 a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~ 113 (126)
T 4gco_A 83 GYIRKAACLVAMREWSKAQRAYEDALQVDPS 113 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCcC
Confidence 9999999999999999999999999999886
No 2
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.75 E-value=5.3e-18 Score=182.28 Aligned_cols=164 Identities=18% Similarity=0.159 Sum_probs=137.5
Q ss_pred ccCCccceehhhccccccccCCCC---CCCCccHHHHHHHHHHHhHhhHHhhcCChHHHHHHHHHHHHHHHHHHHHHHcC
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR---SSPSNRSKEQIEELLNSRQRLKWEKNMLKEDLHIKQAAALVVKLEGNSLFSAG 402 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~---~ip~~~tl~~~~ELl~~kek~k~e~~ms~eElee~~~~A~~lKeeGN~lfk~G 402 (598)
..|+.||++.+.+.|.|+|+..|. .+|++..+.+...+..+.+. ...+.+.. +.+...+..++..|+.+|+.|
T Consensus 207 ~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A-~~~~~~~~---~~~~~~a~~~~~~G~~~~~~g 282 (457)
T 1kt0_A 207 EKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKA-KESWEMDT---KEKLEQAAIVKEKGTVYFKGG 282 (457)
T ss_dssp TTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECC-CCGGGSCH---HHHHHHHHHHHHHHHHHHHTT
T ss_pred HhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccC-cchhhcCH---HHHHHHHHHHHHHHHHHHhCC
Confidence 469999999999999999999885 57777765555544444321 11223333 245678999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCc----------hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHH
Q 007571 403 NISGAASKYSEALALCPMRS----------KKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQ 472 (598)
Q Consensus 403 dY~eAIe~YskALel~P~~~----------~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAq 472 (598)
+|.+|+..|++||+++|.+. ......+|+|+|.||+++++|++|+.+|++||+++|+ ++++|+++|.
T Consensus 283 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~---~~~a~~~~g~ 359 (457)
T 1kt0_A 283 KYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA---NEKGLYRRGE 359 (457)
T ss_dssp CHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc---cHHHHHHHHH
Confidence 99999999999999999862 3445799999999999999999999999999999999 9999999999
Q ss_pred HHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 473 AYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 473 Ay~~LGdy~EAl~d~~kALel~~k 496 (598)
+|..+|+|++|+.+|++++++.|+
T Consensus 360 a~~~~g~~~~A~~~~~~al~l~P~ 383 (457)
T 1kt0_A 360 AQLLMNEFESAKGDFEKVLEVNPQ 383 (457)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTC--
T ss_pred HHHHccCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999886
No 3
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.74 E-value=1.7e-17 Score=150.72 Aligned_cols=111 Identities=24% Similarity=0.302 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCc-----hHHHHHHHHHHHHHHHHcCChHHHHHH
Q 007571 383 IKQAAALVVKLEGNSLFSAGNISGAASKYSEALAL--------CPMRS-----KKERVVLYSNRAQCHLLMQQPLAAISD 449 (598)
Q Consensus 383 e~~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel--------~P~~~-----~~~~a~ly~NRA~cylKLgdyeeAI~D 449 (598)
++++.+..+++.|+.+|+.|+|.+|+..|++||.+ .|.+. ......+|.|+|.||+++|+|++|+.+
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 45678999999999999999999999999999999 33322 334589999999999999999999999
Q ss_pred HHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 450 ATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 450 ~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
|++||+++|+ ++++|+++|.+|..+|++++|+.+|.+++++.|+
T Consensus 86 ~~~al~~~p~---~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~ 129 (162)
T 3rkv_A 86 SSEVLKREET---NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPA 129 (162)
T ss_dssp HHHHHHHSTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHHhcCCc---chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCC
Confidence 9999999999 9999999999999999999999999999999876
No 4
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.74 E-value=3e-17 Score=155.57 Aligned_cols=111 Identities=16% Similarity=0.140 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh-
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPM-------RSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL- 456 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~-------~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL- 456 (598)
...+..++..||.+|+.|+|++|+..|++||+++|. +.....+.+|+|+|.|+.++|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 457899999999999999999999999999999998 433345669999999999999999999999999999
Q ss_pred ------CCCCCcCHHHH----HHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 457 ------HNPLNRHAKSL----WRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 457 ------dP~~~~~~KAy----yRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
+|+ +.++| |++|.++..+|++++|+.+|++++++.|.+.
T Consensus 88 n~~~e~~pd---~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 88 NRRGELNQD---EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHCCTTST---HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hccccCCCc---hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 999 99999 9999999999999999999999999999854
No 5
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.72 E-value=1.6e-17 Score=171.12 Aligned_cols=164 Identities=21% Similarity=0.178 Sum_probs=139.3
Q ss_pred ccCCccceehhhccccccccCCCC---CCCCccHHHHHHHHHHHhHhhHHhhcCChHHHHHHHHHHHHHHHHHHHHHHcC
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR---SSPSNRSKEQIEELLNSRQRLKWEKNMLKEDLHIKQAAALVVKLEGNSLFSAG 402 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~---~ip~~~tl~~~~ELl~~kek~k~e~~ms~eElee~~~~A~~lKeeGN~lfk~G 402 (598)
..|+.||+..+.+.|+|+|+..|. .+|++.++.+..++..+.+.. ...... ++.....+..++..|+.+++.|
T Consensus 86 ~~~~~Ge~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~-~~~~~a---~~~~p~~a~~~~~~g~~~~~~g 161 (336)
T 1p5q_A 86 QRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAK-ESWEMN---SEEKLEQSTIVKERGTVYFKEG 161 (336)
T ss_dssp TTCCTTCEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCC-CGGGCC---HHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcCCCCCeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeeccccc-chhcCC---HHHHHHHHHHHHHHHHHHHHCC
Confidence 459999999999999999999986 478877766655555543211 111222 2335678999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCc----------hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHH
Q 007571 403 NISGAASKYSEALALCPMRS----------KKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQ 472 (598)
Q Consensus 403 dY~eAIe~YskALel~P~~~----------~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAq 472 (598)
+|++|+..|.+|+++.|.+. ......+|.|+|.||+++|+|++|+..|++||+++|+ ++++|+++|.
T Consensus 162 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~---~~~a~~~lg~ 238 (336)
T 1p5q_A 162 KYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSN---NEKGLSRRGE 238 (336)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHHHHHHHHH
Confidence 99999999999999999862 2345799999999999999999999999999999999 9999999999
Q ss_pred HHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 473 AYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 473 Ay~~LGdy~EAl~d~~kALel~~k 496 (598)
+|..+|++++|+.+|++++++.|+
T Consensus 239 ~~~~~g~~~~A~~~~~~al~l~P~ 262 (336)
T 1p5q_A 239 AHLAVNDFELARADFQKVLQLYPN 262 (336)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999886
No 6
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.72 E-value=1.6e-18 Score=179.01 Aligned_cols=165 Identities=19% Similarity=0.130 Sum_probs=137.6
Q ss_pred cCCccceehhhccccccccCCCC----CCCCccHHHHHHHHHHHhHhh--HHhhcCChHHHHHHHHHHHHHHHHHHHHHH
Q 007571 327 HKKLGDSIVNVLQDCIQLQGTVR----SSPSNRSKEQIEELLNSRQRL--KWEKNMLKEDLHIKQAAALVVKLEGNSLFS 400 (598)
Q Consensus 327 ~~k~GE~~~~~L~pdy~~g~~g~----~ip~~~tl~~~~ELl~~kek~--k~e~~ms~eElee~~~~A~~lKeeGN~lfk 400 (598)
.|++||+..+++.|.++||..|. .||++.++.+.+++..+.... ...+.++.+ ++...+..++..|+.+++
T Consensus 115 ~m~~Ge~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~---~~~~~a~~~~~~g~~~~~ 191 (338)
T 2if4_A 115 SMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVE---ERIGAADRRKMDGNSLFK 191 (338)
T ss_dssp HCCBTCEEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHH---HHHHHHHHHHHHHHHTCS
T ss_pred cCCCCCeEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccccccCCHH---HHHHHHHHHHHHHHHHHh
Confidence 59999999999999999998884 688998888877776654211 123445543 457889999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCc------------hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHH
Q 007571 401 AGNISGAASKYSEALALCPMRS------------KKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLW 468 (598)
Q Consensus 401 ~GdY~eAIe~YskALel~P~~~------------~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyy 468 (598)
.|+|.+|+..|.+|+.+.|.+. ......+|+|+|.||+++|+|++|+.+|++||+++|+ +.++|+
T Consensus 192 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~---~~~a~~ 268 (338)
T 2if4_A 192 EEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK---NPKALF 268 (338)
T ss_dssp SSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT---CHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHH
Confidence 9999999999999999999751 0111249999999999999999999999999999999 999999
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 469 RRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 469 RRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
++|.+|..+|++++|+.+|++++++.|++
T Consensus 269 ~lg~a~~~~g~~~~A~~~l~~al~l~p~~ 297 (338)
T 2if4_A 269 RRGKAKAELGQMDSARDDFRKAQKYAPDD 297 (338)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999998863
No 7
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.69 E-value=3.6e-16 Score=138.70 Aligned_cols=107 Identities=18% Similarity=0.188 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCc--
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNR-- 462 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~-- 462 (598)
.+.|..+++.||.+|++|+|++|+..|++||+++|.+ +.+|.|+|.||+++|+|++|+.++++||+++|+...
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~-----~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 79 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN-----ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADY 79 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhh
Confidence 4578899999999999999999999999999999999 999999999999999999999999999999987210
Q ss_pred --CHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 463 --HAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 463 --~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
..++|+++|.++..+|++++|+..|+++++..++
T Consensus 80 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 80 KLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 1479999999999999999999999999998653
No 8
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.65 E-value=6e-15 Score=127.74 Aligned_cols=101 Identities=22% Similarity=0.203 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|+.+++.|+|++|+..|++|++++|.+ +.+|.|+|.||+++|+|++|+.+++++++++|+ ++.+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~~ 74 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED-----ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN---FVRA 74 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-----hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---cHHH
Confidence 57889999999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
++++|.++..+|++++|+..|++++++.|
T Consensus 75 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p 103 (126)
T 3upv_A 75 YIRKATAQIAVKEYASALETLDAARTKDA 103 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999984
No 9
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.59 E-value=6e-14 Score=127.40 Aligned_cols=104 Identities=24% Similarity=0.129 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+...|+.+++.|+|++|+..|+++++++|.+ ..+|.|+|.||+++|+|++|+.+++++++++|+ ++.
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~ 80 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN-----PIYLSNRAAAYSASGQHEKAAEDAELATVVDPK---YSK 80 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---CHH
Confidence 468889999999999999999999999999999998 999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
+|+++|.+|..+|++++|+..|++++++.|++
T Consensus 81 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 112 (164)
T 3sz7_A 81 AWSRLGLARFDMADYKGAKEAYEKGIEAEGNG 112 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999999999874
No 10
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.58 E-value=2.5e-14 Score=132.50 Aligned_cols=103 Identities=13% Similarity=-0.025 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+...|..+++.|+|++|+..|++++.++|.+ +.+|.|+|.||..+|+|++|+..|++|++++|+ ++.
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~-----~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~---~~~ 105 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYN-----VDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN---DYT 105 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSS---CCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCC---CcH
Confidence 467789999999999999999999999999999999 999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+|+++|.+|..+|++++|+..|++++++.++
T Consensus 106 ~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~ 136 (151)
T 3gyz_A 106 PVFHTGQCQLRLKAPLKAKECFELVIQHSND 136 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999875
No 11
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.58 E-value=7.3e-14 Score=121.15 Aligned_cols=127 Identities=27% Similarity=0.319 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|..++..|+|++|+..|.+++..+|.+ +.++.|+|.||+.+|+|++|+..+.++++++|+ ++.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~---~~~~ 79 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV-----AVYYTNRALCYLKMQQPEQALADCRRALELDGQ---SVKA 79 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch---hHHH
Confidence 46779999999999999999999999999999998 899999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhccCCCCchhhccCChHHHHHHHHHHHHHHHHHHHH
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQSNDPDLSLRQNKVPDYAERLVKKQMRAAWLFRE 529 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k~~d~~~~~r~~Ki~~~ierlL~Kqk~a~~~f~e 529 (598)
++.+|.++..+|++++|+..|.++++..|+.. ......+...+.+.+...|...+
T Consensus 80 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~--------~~~~~~~~~~l~~~~~~~~~~~e 134 (137)
T 3q49_B 80 HFFLGQCQLEMESYDEAIANLQRAYSLAKEQR--------LNFGDDIPSALRIAKKKRWNSIE 134 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--------CCCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHChhHH--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988632 12334667777777777766554
No 12
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.56 E-value=8e-14 Score=130.41 Aligned_cols=122 Identities=22% Similarity=0.220 Sum_probs=108.4
Q ss_pred hhHHhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCch-----------HHHHHHHHHHHHHH
Q 007571 369 RLKWEKNMLKEDLHIKQAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSK-----------KERVVLYSNRAQCH 437 (598)
Q Consensus 369 k~k~e~~ms~eElee~~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~-----------~~~a~ly~NRA~cy 437 (598)
+.+..+.++.++ +...+..+...|+.+++.|+|++|+..|.+|+.+.|.... .....++.|+|.||
T Consensus 22 ~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 98 (198)
T 2fbn_A 22 AKKSIYDYTDEE---KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCY 98 (198)
T ss_dssp CCCSGGGCCHHH---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCchhhCCHHH---HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 334456777653 4778999999999999999999999999999999988631 11248999999999
Q ss_pred HHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 438 LLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 438 lKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+++|+|++|+..++++++++|+ ++++++++|.+|..+|++++|+..|+++++..|.
T Consensus 99 ~~~~~~~~A~~~~~~al~~~p~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 154 (198)
T 2fbn_A 99 NKNKDYPKAIDHASKVLKIDKN---NVKALYKLGVANMYFGFLEEAKENLYKAASLNPN 154 (198)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHhcCHHHHHHHHHHHHHhCcc---cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999 9999999999999999999999999999999775
No 13
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.53 E-value=2.7e-13 Score=120.97 Aligned_cols=102 Identities=9% Similarity=-0.015 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
....+...|..+++.|+|++|+..|.+++..+|.+ +.+|.++|.+|..+|+|++|+..+++|+.++|+ ++.+
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~ 88 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYD-----ARYFLGLGACRQSLGLYEQALQSYSYGALMDIN---EPRF 88 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CTHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCcc-----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC---CcHH
Confidence 46678899999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.+|..+|++++|+..|+++++..|.
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 118 (142)
T 2xcb_A 89 PFHAAECHLQLGDLDGAESGFYSARALAAA 118 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999986
No 14
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.52 E-value=1.8e-13 Score=124.49 Aligned_cols=102 Identities=11% Similarity=0.033 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|..++..|+|++|+..|.+++..+|.+ +.++.++|.+|..+|+|++|+..+++|+.++|+ ++.+
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~---~~~~ 91 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYD-----SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX---EPRF 91 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CTHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCccc-----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC---CchH
Confidence 56778899999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.+|..+|++++|+..|.+++++.|.
T Consensus 92 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 121 (148)
T 2vgx_A 92 PFHAAECLLQXGELAEAESGLFLAQELIAN 121 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCcC
Confidence 999999999999999999999999999886
No 15
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.51 E-value=1.9e-13 Score=143.57 Aligned_cols=113 Identities=22% Similarity=0.222 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------chHHHHHHHHHHHHHHHHcCChHHHHHH
Q 007571 381 LHIKQAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR-----------SKKERVVLYSNRAQCHLLMQQPLAAISD 449 (598)
Q Consensus 381 lee~~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~-----------~~~~~a~ly~NRA~cylKLgdyeeAI~D 449 (598)
.++....+..++..|+.+++.|+|++|+..|++||++.|.. .......+|.|+|.||+++++|++|+.+
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 33456788999999999999999999999999999954331 2234589999999999999999999999
Q ss_pred HHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 450 ATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 450 ~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
|++||+++|+ ++++|+++|.+|..+|++++|+.+|++++++.|+
T Consensus 296 ~~~al~~~p~---~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~ 339 (370)
T 1ihg_A 296 CLEALEIDPS---NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPE 339 (370)
T ss_dssp HHHHHTTCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHhCch---hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 9999999999 9999999999999999999999999999999875
No 16
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.47 E-value=2.8e-13 Score=123.13 Aligned_cols=103 Identities=7% Similarity=-0.142 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
+.+......|+.+++.|+|++|++.|++||+++|.+ +.+|.++|.+|.++|++++|+..+.++++++|+ ++.
T Consensus 29 ~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~ 100 (150)
T 4ga2_A 29 QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD-----PKAHRFLGLLYELEENTDKAVECYRRSVELNPT---QKD 100 (150)
T ss_dssp HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC---CHH
Confidence 356677889999999999999999999999999999 999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHHH-HHHHHHhcc
Q 007571 466 SLWRRAQAYDMLALAKESLLDA-ILFINECSQ 496 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~-~kALel~~k 496 (598)
+++.+|.+|..+|++++|...| ++++++.|+
T Consensus 101 ~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~ 132 (150)
T 4ga2_A 101 LVLKIAELLCKNDVTDGRAKYWVERAAKLFPG 132 (150)
T ss_dssp HHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHhCcC
Confidence 9999999999999999888764 899999886
No 17
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.46 E-value=5.1e-12 Score=111.81 Aligned_cols=104 Identities=28% Similarity=0.298 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCH
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHA 464 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~ 464 (598)
...+..+...|+.++..|+|++|+..|.++++..|.+ ..++.++|.++..+|+|++|+..+.++++++|+ ++
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~---~~ 81 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN-----AIYYGNRSLAYLRTECYGYALGDATRAIELDKK---YI 81 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc---cH
Confidence 5678999999999999999999999999999999998 999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 465 KSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 465 KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.+++.+|.++..+|++++|+..|.++++..|.
T Consensus 82 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~ 113 (166)
T 1a17_A 82 KGYYRRAASNMALGKFRAALRDYETVVKVKPH 113 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999775
No 18
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.45 E-value=1.2e-12 Score=131.08 Aligned_cols=103 Identities=30% Similarity=0.365 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..++..|+.+++.|+|++|+..|++|+..+|.+ +.+|.|+|.+|+++|+|++|+.++++|++++|+ +++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~ 75 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV-----AVYYTNRALCYLKMQQPEQALADCRRALELDGQ---SVKAH 75 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---CHHHH
Confidence 5678999999999999999999999999999998 999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
+++|.+|..+|++++|+..|.+++++.|++.
T Consensus 76 ~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 76 FFLGQCQLEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCccch
Confidence 9999999999999999999999999998743
No 19
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.44 E-value=1.8e-12 Score=107.42 Aligned_cols=102 Identities=28% Similarity=0.273 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|..++..|+|++|+..|.+++...|.+ ..++.++|.+|..+|++++|+..+.++++++|+ ++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~ 74 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN-----HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD---WGKG 74 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc-----HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc---cHHH
Confidence 46778999999999999999999999999999998 899999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.++..+|++++|+..|.++++..|.
T Consensus 75 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 104 (118)
T 1elw_A 75 YSRKAAALEFLNRFEEAKRTYEEGLKHEAN 104 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999998765
No 20
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.42 E-value=4.2e-12 Score=108.00 Aligned_cols=102 Identities=27% Similarity=0.322 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
....+...|+.++..|+|++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..++++++++|+ +..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~ 86 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD-----AKLYSNRAACYTKLLEFQLALKDCEECIQLEPT---FIKG 86 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC-----HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc-----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC---chHH
Confidence 47789999999999999999999999999999998 899999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.++..+|++++|+..|+++++..|.
T Consensus 87 ~~~la~~~~~~~~~~~A~~~~~~~~~~~p~ 116 (133)
T 2lni_A 87 YTRKAAALEAMKDYTKAMDVYQKALDLDSS 116 (133)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999775
No 21
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.41 E-value=2.4e-12 Score=113.16 Aligned_cols=98 Identities=16% Similarity=0.030 Sum_probs=91.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHH
Q 007571 391 VKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRR 470 (598)
Q Consensus 391 lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRR 470 (598)
+...|..+++.|+|++|+..|.+|++.+|.+ +.++.++|.++..+|++++|+..+++|++++|+ ++.+++.+
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~-----~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~---~~~~~~~l 91 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPER-----EEAWRSLGLTQAENEKDGLAIIALNHARMLDPK---DIAVHAAL 91 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHH
Confidence 5678999999999999999999999999999 999999999999999999999999999999999 99999999
Q ss_pred HHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 471 AQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 471 AqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
|.+|..+|++++|+..|+++++..|.
T Consensus 92 a~~~~~~g~~~~A~~~~~~al~~~P~ 117 (121)
T 1hxi_A 92 AVSHTNEHNANAALASLRAWLLSQPQ 117 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 99999999999999999999998775
No 22
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.38 E-value=1.4e-11 Score=103.56 Aligned_cols=104 Identities=25% Similarity=0.282 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCH
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHA 464 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~ 464 (598)
...+..+...|..++..|+|++|+..|.+++...|.+ ..++.++|.++..+|++++|+..+.+++.++|+ ++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~ 80 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN-----AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA---YS 80 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC-----HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc---CH
Confidence 4568889999999999999999999999999999998 899999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 465 KSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 465 KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.+++.+|.++..+|++++|+..|.++++..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~ 112 (131)
T 2vyi_A 81 KAYGRMGLALSSLNKHVEAVAYYKKALELDPD 112 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCcc
Confidence 99999999999999999999999999999775
No 23
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.38 E-value=9.4e-12 Score=104.92 Aligned_cols=101 Identities=19% Similarity=0.123 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC---
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH--- 463 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~--- 463 (598)
.+..+...|..++..|+|++|+..|.+++...|.+ ..++.++|.+|..+|+|++|+..+.+++.+.|. +
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~ 74 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN-----MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE---NRED 74 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH---STTC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc-----HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc---cchh
Confidence 46788999999999999999999999999999998 899999999999999999999999999999987 6
Q ss_pred ----HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 464 ----AKSLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 464 ----~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
+.+++.+|.++..+|++++|+..|.++++..+
T Consensus 75 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 75 YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999999999865
No 24
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=8.4e-12 Score=108.33 Aligned_cols=105 Identities=30% Similarity=0.467 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|..++..|+|++|+..|+++++..|.+ .....++.++|.+|+.+++|++|+..++++++++|+ ++.+
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~ 101 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP--QDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGG---DVKA 101 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH--HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC---CHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc---CHHH
Confidence 46678899999999999999999999999999863 445789999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.++..+|++++|+..|+++++..|+
T Consensus 102 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 131 (148)
T 2dba_A 102 LYRRSQALEKLGRLDQAVLDLQRCVSLEPK 131 (148)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999775
No 25
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.35 E-value=6.1e-12 Score=119.62 Aligned_cols=102 Identities=15% Similarity=-0.043 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHH----------------HHHHHHHcCChHHHHHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSN----------------RAQCHLLMQQPLAAISDAT 451 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~N----------------RA~cylKLgdyeeAI~D~~ 451 (598)
+..+..+|..++..|+|++|+..|+++++.+|.+ +.+|.+ +|.+|.++|++++|+..++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 78 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDR-----TEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYK 78 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHH-----HHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-----hHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 5668889999999999999999999999999987 777777 9999999999999999999
Q ss_pred HHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 452 RALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 452 kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
++++++|+ ++.+++.+|.++..+|++++|+..|++++++.|++
T Consensus 79 ~al~~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 79 ELLQKAPN---NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HHHHHCTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 99999999 99999999999999999999999999999998863
No 26
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.35 E-value=1.2e-11 Score=105.93 Aligned_cols=102 Identities=10% Similarity=-0.062 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC---HHH
Q 007571 390 VVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH---AKS 466 (598)
Q Consensus 390 ~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~---~KA 466 (598)
.+...|..++..|+|++|+..|.++++..|.+ .....++.++|.+|+++|+|++|+..+.+++..+|+ + +.+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~--~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~---~~~~~~~ 78 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNG--VYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT---HDKAAGG 78 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSS--TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---STTHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCC--cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC---CcccHHH
Confidence 46778999999999999999999999999987 222379999999999999999999999999999999 8 899
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.++..+|++++|+..|+++++..|+
T Consensus 79 ~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 108 (129)
T 2xev_A 79 LLKLGLSQYGEGKNTEAQQTLQQVATQYPG 108 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999999999875
No 27
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.35 E-value=9.3e-13 Score=109.76 Aligned_cols=94 Identities=22% Similarity=0.225 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC---
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH--- 463 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~--- 463 (598)
.+..+...|+.++..|+|++|+..|++|+++.|.+ +.++.|+|.||+++|+|++|+..++++++++|+ +
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~ 74 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN-----PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTST---AEHV 74 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSS---TTSH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---ccHH
Confidence 36678999999999999999999999999999998 899999999999999999999999999999999 8
Q ss_pred ---HHHHHHHHHHHHHhhcHHHHHHHHH
Q 007571 464 ---AKSLWRRAQAYDMLALAKESLLDAI 488 (598)
Q Consensus 464 ---~KAyyRRAqAy~~LGdy~EAl~d~~ 488 (598)
.++++++|.++..+|++++|+..+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 75 AIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 9999999999999999888865544
No 28
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.35 E-value=9.7e-12 Score=142.24 Aligned_cols=103 Identities=19% Similarity=0.106 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+.+.|+.+.+.|+|++|+..|.+||+++|++ +.+|.|+|.+|..+|++++|+..+++||+++|+ +..
T Consensus 41 ~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~-----~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~---~~~ 112 (723)
T 4gyw_A 41 EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF-----ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPA---FAD 112 (723)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHH
Confidence 345555566666666666666666666666666665 566666666666666666666666666666666 666
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+|+++|.+|..+|++++|+..|++++++.|+
T Consensus 113 a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~ 143 (723)
T 4gyw_A 113 AHSNLASIHKDSGNIPEAIASYRTALKLKPD 143 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 6666666666666666666666666666543
No 29
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.34 E-value=1.2e-11 Score=118.42 Aligned_cols=101 Identities=14% Similarity=0.032 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..+++.|+|++|+..|+++++.+|.+ +.++.++|.++..+|++++|+..++++++++|+ ++.++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~---~~~a~ 76 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQD-----PEALYWLARTQLKLGLVNPALENGKTLVARTPR---YLGGY 76 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHHHH
Confidence 4567889999999999999999999999999999 999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHh-----------hcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDML-----------ALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~L-----------Gdy~EAl~d~~kALel~~k 496 (598)
+.+|.++..+ |++++|+..|+++++..|+
T Consensus 77 ~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~ 116 (217)
T 2pl2_A 77 MVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR 116 (217)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc
Confidence 9999999999 9999999999999999886
No 30
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.33 E-value=1.7e-11 Score=116.11 Aligned_cols=101 Identities=23% Similarity=0.133 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCP-MRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P-~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
+..+...|..++..|+|++|+..|++++++.| .+ ..++.|+|.||..+|+|++|+..++++++++|+ +..+
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---~~~~ 78 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQD-----SVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN---LANA 78 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS---HHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCC-----cHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc---hHHH
Confidence 35788999999999999999999999999998 77 788999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.+|..+|++++|+..|+++++..|+
T Consensus 79 ~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 108 (228)
T 4i17_A 79 YIGKSAAYRDMKNNQEYIATLTEGIKAVPG 108 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999999999886
No 31
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.31 E-value=4.6e-11 Score=109.04 Aligned_cols=100 Identities=16% Similarity=0.139 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+.+.|+.++++|+|++|+..|++||+++|++ +.++.++|.+|.++|++++|+..+.+++..+|+ +..++
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~ 76 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN-----VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT---SAEAY 76 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch---hHHHH
Confidence 4445666666666677777777777777766666 566666666666666666666666666655555 55555
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
+.+|.++...++++.|...+.++++..|
T Consensus 77 ~~~~~~~~~~~~~~~a~~~~~~a~~~~~ 104 (184)
T 3vtx_A 77 YILGSANFMIDEKQAAIDALQRAIALNT 104 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 5555555555555555555555555544
No 32
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.29 E-value=4.2e-11 Score=109.30 Aligned_cols=101 Identities=15% Similarity=0.084 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..++++.|+..+.+++.+.|.+ ..++.++|.+|.++|+|++|+..++++++++|. ++.++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~---~~~~~ 144 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIALNTVY-----ADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPG---FIRAY 144 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-----hHHHHHHHHHHHHhCCchhHHHHHHHHHHhcch---hhhHH
Confidence 4567788999999999999999999999999999 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.+|.+|..+|++++|+..|+++++..|+
T Consensus 145 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 145 QSIGLAYEGKGLRDEAVKYFKKALEKEEK 173 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhCCcc
Confidence 99999999999999999999999998765
No 33
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.29 E-value=7e-11 Score=112.30 Aligned_cols=97 Identities=14% Similarity=-0.010 Sum_probs=85.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHH
Q 007571 392 KLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRA 471 (598)
Q Consensus 392 KeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRA 471 (598)
...|..+++.|+|++|+..|+++++++|.+ +.++.++|.+|+.+|++++|+..++++++++|+ ++.+++.+|
T Consensus 58 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~---~~~a~~~lg 129 (208)
T 3urz_A 58 TELALAYKKNRNYDKAYLFYKELLQKAPNN-----VDCLEACAEMQVCRGQEKDALRMYEKILQLEAD---NLAANIFLG 129 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---CHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---CHHHHHHHH
Confidence 349999999999999999999999999999 999999999999999999999999999999999 888888887
Q ss_pred HHHHHh-----------------------------------hcHHHHHHHHHHHHHHhcc
Q 007571 472 QAYDML-----------------------------------ALAKESLLDAILFINECSQ 496 (598)
Q Consensus 472 qAy~~L-----------------------------------Gdy~EAl~d~~kALel~~k 496 (598)
.+|+.. |+|++|+.+|++++++.|+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 189 (208)
T 3urz_A 130 NYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPS 189 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 776544 4567777777777777653
No 34
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.28 E-value=4e-11 Score=114.73 Aligned_cols=100 Identities=12% Similarity=-0.003 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHc-----------CChHHHHHHHHHHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLM-----------QQPLAAISDATRALC 455 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKL-----------gdyeeAI~D~~kALe 455 (598)
.+..+...|..+++.|++++|+..|.++++++|.+ +.++.|+|.++..+ |++++|+..++++++
T Consensus 38 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-----~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 112 (217)
T 2pl2_A 38 DPEALYWLARTQLKLGLVNPALENGKTLVARTPRY-----LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAER 112 (217)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHH
Confidence 46678899999999999999999999999999999 99999999999999 999999999999999
Q ss_pred hCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHh
Q 007571 456 LHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINEC 494 (598)
Q Consensus 456 LdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~ 494 (598)
++|+ ++.+++.+|.++..+|++++|+..|+++++..
T Consensus 113 ~~P~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 113 VNPR---YAPLHLQRGLVYALLGERDKAEASLKQALALE 148 (217)
T ss_dssp HCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hCcc---cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc
Confidence 9999 99999999999999999999999999999986
No 35
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.27 E-value=2.2e-10 Score=95.41 Aligned_cols=101 Identities=20% Similarity=0.120 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..|+|++|+..|.+++...|.+ ..++.++|.++...|++++|+..+.+++.++|. ++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 80 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN---NAEAW 80 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc---cHHHH
Confidence 5678889999999999999999999999999988 889999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.+|.++..+|++++|+..|.++++..|.
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 109 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYYQKALELDPN 109 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999765
No 36
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.26 E-value=2.8e-11 Score=138.39 Aligned_cols=104 Identities=17% Similarity=0.048 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+.+.|+.+.++|+|++|+..|++||+++|++ +.+|.|+|.+|.++|++++|+..+++||+++|+ +..
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~-----~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~---~~~ 78 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-----AAAHSNLASVLQQQGKLQEALMHYKEAIRISPT---FAD 78 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHH
Confidence 468889999999999999999999999999999999 999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
+|+++|.+|..+|++++|+..|++++++.|+.
T Consensus 79 a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~ 110 (723)
T 4gyw_A 79 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 110 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999998863
No 37
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.24 E-value=4.5e-11 Score=126.56 Aligned_cols=108 Identities=11% Similarity=0.062 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 007571 381 LHIKQAAALVVKLEGNSLFSAGN-ISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNP 459 (598)
Q Consensus 381 lee~~~~A~~lKeeGN~lfk~Gd-Y~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~ 459 (598)
++.....+..+..+|..+...|+ |++|+..|++||+++|.+ ..+|.|||.++..+|+|++|+.++++||+++|+
T Consensus 124 l~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~-----~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~ 198 (382)
T 2h6f_A 124 IELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN-----YQVWHHRRVLVEWLRDPSQELEFIADILNQDAK 198 (382)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT
T ss_pred HHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 33344567778889999999996 999999999999999988 889999999999999999999999999999999
Q ss_pred CCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 460 LNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 460 ~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+..+|+.+|.++..+|++++|+.+|.++|++.|.
T Consensus 199 ---~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~ 232 (382)
T 2h6f_A 199 ---NYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVR 232 (382)
T ss_dssp ---CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT
T ss_pred ---CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999998775
No 38
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.23 E-value=6.1e-12 Score=114.21 Aligned_cols=95 Identities=6% Similarity=-0.117 Sum_probs=87.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHH
Q 007571 394 EGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQA 473 (598)
Q Consensus 394 eGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqA 473 (598)
.|+.+..+|++++|+..|.+++...|.. +..++++|.+|+++|+|++|+..++++|+++|+ ++.+|+.+|.+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~-----~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~---~~~a~~~lg~~ 74 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQK-----SIKGFYFAKLYYEAKEYDLAKKYICTYINVQER---DPKAHRFLGLL 74 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHH-----HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCccc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHH
Confidence 4667778899999999999999988876 888999999999999999999999999999999 99999999999
Q ss_pred HHHhhcHHHHHHHHHHHHHHhcc
Q 007571 474 YDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 474 y~~LGdy~EAl~d~~kALel~~k 496 (598)
|..+|++++|+..|++++++.|+
T Consensus 75 ~~~~~~~~~A~~~~~~al~~~p~ 97 (150)
T 4ga2_A 75 YELEENTDKAVECYRRSVELNPT 97 (150)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHcCchHHHHHHHHHHHHhCCC
Confidence 99999999999999999999886
No 39
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.23 E-value=1.3e-11 Score=106.43 Aligned_cols=89 Identities=15% Similarity=-0.020 Sum_probs=80.5
Q ss_pred HcCCHHHHHHHHHHHHHhC---CCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHH
Q 007571 400 SAGNISGAASKYSEALALC---PMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDM 476 (598)
Q Consensus 400 k~GdY~eAIe~YskALel~---P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~ 476 (598)
..|+|++|+..|.+|+++. |.+ ..++.|+|.+|+.+|+|++|+..++++++++|+ ++.+++.+|.++..
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~ 73 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDL-----AECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN---HQALRVFYAMVLYN 73 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccH-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---chHHHHHHHHHHHH
Confidence 4689999999999999984 655 899999999999999999999999999999999 99999999999999
Q ss_pred hhcHHHHHHHHHHHHHHhcc
Q 007571 477 LALAKESLLDAILFINECSQ 496 (598)
Q Consensus 477 LGdy~EAl~d~~kALel~~k 496 (598)
+|++++|+..|+++++..|+
T Consensus 74 ~g~~~~A~~~~~~al~~~p~ 93 (117)
T 3k9i_A 74 LGRYEQGVELLLKIIAETSD 93 (117)
T ss_dssp HTCHHHHHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999876
No 40
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.22 E-value=2.4e-10 Score=107.40 Aligned_cols=102 Identities=22% Similarity=0.201 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+...|..++..|+|++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..++++++++|+ ++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~---~~~ 208 (258)
T 3uq3_A 137 EKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED-----ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN---FVR 208 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCccc-----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHH---HHH
Confidence 356778899999999999999999999999999998 899999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
+++.+|.++..+|++++|+..|+++++..+
T Consensus 209 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 238 (258)
T 3uq3_A 209 AYIRKATAQIAVKEYASALETLDAARTKDA 238 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCh
Confidence 999999999999999999999999999984
No 41
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.22 E-value=3.8e-10 Score=102.79 Aligned_cols=102 Identities=19% Similarity=0.065 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHH-HHHcCCh--HHHHHHHHHHHHhCCCCCcCH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQC-HLLMQQP--LAAISDATRALCLHNPLNRHA 464 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~c-ylKLgdy--eeAI~D~~kALeLdP~~~~~~ 464 (598)
+..+...|..++..|+|++|+..|.+++++.|.+ ..++.++|.+ |+..|++ ++|+..+.++++++|+ ++
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~---~~ 115 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN-----AELYAALATVLYYQASQHMTAQTRAMIDKALALDSN---EI 115 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC-----HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTT---CH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCC---cH
Confidence 4568889999999999999999999999999998 8999999999 8899999 9999999999999999 99
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 465 KSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 465 KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
.+++.+|.++..+|++++|+..|.++++..|.+
T Consensus 116 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 116 TALMLLASDAFMQANYAQAIELWQKVMDLNSPR 148 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999998863
No 42
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.22 E-value=1.2e-10 Score=108.22 Aligned_cols=101 Identities=17% Similarity=0.056 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCH---
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHA--- 464 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~--- 464 (598)
+..+...|..+++.|+|++|+..|.+|+.++|.. +.++.|+|.+|..+|+|++|+..+++++++.|. +.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~ 108 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHL-----AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRG---NQLID 108 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT---CSEEE
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-----hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC---ccHHH
Confidence 4578899999999999999999999999999998 899999999999999999999999999998887 55
Q ss_pred -------------HHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 465 -------------KSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 465 -------------KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.+++.+|.++..+|++++|+..|+++++..|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 153 (213)
T 1hh8_A 109 YKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSE 153 (213)
T ss_dssp CGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred HHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcc
Confidence 99999999999999999999999999999775
No 43
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.22 E-value=3.2e-11 Score=130.59 Aligned_cols=103 Identities=28% Similarity=0.306 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
+.+..+...|+.+++.|+|++|+..|++|++++|.+ +.+|.|+|.+|.++|+|++|+.++++|++++|+ ++.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~---~~~ 75 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN-----AIYYGNRSLAYLRTECYGYALGDATRAIELDKK---YIK 75 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT---CHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---CHH
Confidence 457778889999999999999999999999999999 999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+++++|.+|..+|++++|+..|+++++..|+
T Consensus 76 ~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~ 106 (477)
T 1wao_1 76 GYYRRAASNMALGKFRAALRDYETVVKVKPH 106 (477)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999876
No 44
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.22 E-value=4.8e-11 Score=126.32 Aligned_cols=101 Identities=12% Similarity=-0.015 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQ-PLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgd-yeeAI~D~~kALeLdP~~~~~~KA 466 (598)
+..+...|..+++.|+|++|+..|++||+++|.+ ..+|.|||.++..+|+ +++|+.++++||+++|+ +..+
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~-----~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~---~~~a 168 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIELNAAN-----YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK---NYQV 168 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccC-----HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC---CHHH
Confidence 4445556666666666666666666666666666 6666666666666664 66666666666666666 6666
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
|+.+|.++..+|++++|+.+|+++|++.|+
T Consensus 169 ~~~~g~~~~~~g~~~eAl~~~~kal~ldP~ 198 (382)
T 2h6f_A 169 WHHRRVLVEWLRDPSQELEFIADILNQDAK 198 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 666666666666666666666666666554
No 45
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.22 E-value=8.8e-11 Score=96.47 Aligned_cols=102 Identities=14% Similarity=0.109 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHH
Q 007571 389 LVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLW 468 (598)
Q Consensus 389 ~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyy 468 (598)
..+...|..++..|+|++|+..|.++++..|.+ ..++.++|.+|+.+|+|++|+..++++++++|. ..+..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~ 80 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE-----SKYWLMKGKALYNLERYEEAVDCYNYVINVIED-EYNKDVWA 80 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC-TTCHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc-cchHHHHH
Confidence 345678999999999999999999999999998 889999999999999999999999999999987 22579999
Q ss_pred HHHHHHHHh-hcHHHHHHHHHHHHHHhcc
Q 007571 469 RRAQAYDML-ALAKESLLDAILFINECSQ 496 (598)
Q Consensus 469 RRAqAy~~L-Gdy~EAl~d~~kALel~~k 496 (598)
.+|.++..+ |++++|+..+.++++..|.
T Consensus 81 ~l~~~~~~~~~~~~~A~~~~~~~~~~~p~ 109 (112)
T 2kck_A 81 AKADALRYIEGKEVEAEIAEARAKLEHHH 109 (112)
T ss_dssp HHHHHHTTCSSCSHHHHHHHHHHGGGCCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHhhcccC
Confidence 999999999 9999999999999998775
No 46
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.3e-10 Score=120.97 Aligned_cols=103 Identities=27% Similarity=0.296 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCH
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHA 464 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~ 464 (598)
.+.+..+...|+.+++.|+|++|+..|++++...|+ +.++.++|.||+++|+|++|+..++++++++|+ ++
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~---~~ 73 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED------PVFYSNLSACYVSVGDLKKVVEMSTKALELKPD---YS 73 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSC---CH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc------HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChH---HH
Confidence 567999999999999999999999999999999994 789999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 465 KSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 465 KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.+++.+|.++..+|++++|+..|.++++..+.
T Consensus 74 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 105 (514)
T 2gw1_A 74 KVLLRRASANEGLGKFADAMFDLSVLSLNGDF 105 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999998764
No 47
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.20 E-value=4.9e-10 Score=106.90 Aligned_cols=103 Identities=18% Similarity=0.037 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+...|..++..|+|++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..+.++++++|+ ++.
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~---~~~ 112 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM-----PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT---YNY 112 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CTH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc-----HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc---ccH
Confidence 457889999999999999999999999999999998 899999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+++.+|.+|..+|++++|+..|+++++..|+
T Consensus 113 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (275)
T 1xnf_A 113 AHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 143 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999775
No 48
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.19 E-value=4.8e-10 Score=108.67 Aligned_cols=110 Identities=13% Similarity=0.088 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|..+++.|+|++|+..|.++++..|.+ .....++.++|.||+++|+|++|+..+++++++.|+......+
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~--~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH--EWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS--TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC--cchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 46678999999999999999999999999999975 3447899999999999999999999999999998863225789
Q ss_pred HHHHHHHHHH--------hhcHHHHHHHHHHHHHHhccCC
Q 007571 467 LWRRAQAYDM--------LALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 467 yyRRAqAy~~--------LGdy~EAl~d~~kALel~~k~~ 498 (598)
++.+|.++.. +|++++|+..|+++++..|++.
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 9999999999 9999999999999999998743
No 49
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.18 E-value=2.3e-10 Score=106.32 Aligned_cols=101 Identities=15% Similarity=0.076 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+...|+.++..|+|++|+..|.+++ .| + +.++.|+|.+|..+|+|++|+..+.++++++|+ ++.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~---~~~ 72 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP-H-----SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH---LAV 72 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-C-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-C-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc---chH
Confidence 356678899999999999999999999996 44 4 789999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
+++.+|.+|..+|++++|+..|+++++..+.+
T Consensus 73 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 73 AYFQRGMLYYQTEKYDLAIKDLKEALIQLRGN 104 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999999988763
No 50
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.16 E-value=2.5e-10 Score=107.98 Aligned_cols=100 Identities=11% Similarity=-0.022 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCH----
Q 007571 389 LVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHA---- 464 (598)
Q Consensus 389 ~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~---- 464 (598)
..+...|..++..|+|++|+..|.+|++..|.+ ..++.++|.+|..+|++++|+..++++++++|+ ++
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~ 114 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNL-----ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPG---NATIEK 114 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcch-----HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC---cHHHHH
Confidence 456669999999999999999999999999998 999999999999999999999999999999999 88
Q ss_pred ---HHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 465 ---KSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 465 ---KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.+|+.+|.++..+|++++|+..|+++++..|+
T Consensus 115 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 115 LYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 77999999999999999999999999998664
No 51
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.15 E-value=7.5e-11 Score=111.58 Aligned_cols=89 Identities=13% Similarity=0.066 Sum_probs=83.6
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCCh----------HHHHHHHHHHHHhCCCCCcCHHHHHH
Q 007571 400 SAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQP----------LAAISDATRALCLHNPLNRHAKSLWR 469 (598)
Q Consensus 400 k~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdy----------eeAI~D~~kALeLdP~~~~~~KAyyR 469 (598)
+.+.|++|++.|.+|++++|.+ +.+|.|+|.++..++++ ++||..+++||+++|+ +..+||.
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~-----aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~---~~~A~~~ 85 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLD-----ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK---KDEAVWC 85 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT---CHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC---cHHHHHH
Confidence 4467899999999999999999 99999999999999875 5999999999999999 9999999
Q ss_pred HHHHHHHhh-----------cHHHHHHHHHHHHHHhcc
Q 007571 470 RAQAYDMLA-----------LAKESLLDAILFINECSQ 496 (598)
Q Consensus 470 RAqAy~~LG-----------dy~EAl~d~~kALel~~k 496 (598)
+|.+|..+| ++++|+..|++|+++.|+
T Consensus 86 LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 86 IGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 999999985 899999999999999876
No 52
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.14 E-value=3.5e-10 Score=118.80 Aligned_cols=104 Identities=31% Similarity=0.398 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC
Q 007571 384 KQAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH 463 (598)
Q Consensus 384 ~~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~ 463 (598)
+...+..+...|+.+++.|+|++|+..|+++++.+|.+ +.++.++|.||+++|+|++|+..++++++++|+ +
T Consensus 21 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~---~ 92 (537)
T 3fp2_A 21 RQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNE-----PVFYSNISACYISTGDLEKVIEFTTKALEIKPD---H 92 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---C
T ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCC-----cHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc---h
Confidence 35689999999999999999999999999999999999 999999999999999999999999999999999 9
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 464 AKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 464 ~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.+++.+|.++..+|++++|+..|+ ++...|.
T Consensus 93 ~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~ 124 (537)
T 3fp2_A 93 SKALLRRASANESLGNFTDAMFDLS-VLSLNGD 124 (537)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHH-HHC----
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCC
Confidence 9999999999999999999999995 7777665
No 53
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.12 E-value=1.1e-09 Score=104.77 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCH---
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHA--- 464 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~--- 464 (598)
+..+...|..+++.|+|++|+..|+++++..|.. .....++.++|.+|+++|+|++|+..++++++++|+ +.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~--~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~---~~~~~ 78 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFG--PYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT---HPNID 78 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS--TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CTTHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC---CCcHH
Confidence 4568889999999999999999999999999975 233578999999999999999999999999999999 54
Q ss_pred HHHHHHHHHHHH------------------hhcHHHHHHHHHHHHHHhccCC
Q 007571 465 KSLWRRAQAYDM------------------LALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 465 KAyyRRAqAy~~------------------LGdy~EAl~d~~kALel~~k~~ 498 (598)
.++|.+|.++.. +|++++|+..|+++++..|++.
T Consensus 79 ~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 79 YVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp HHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred HHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 489999999987 5799999999999999998744
No 54
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.12 E-value=6.5e-10 Score=94.73 Aligned_cols=84 Identities=10% Similarity=-0.092 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHH
Q 007571 405 SGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESL 484 (598)
Q Consensus 405 ~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl 484 (598)
..|+..|.++++..|.+ +.++.++|.+|+.+|+|++|+..+.++++++|+ +..+++.+|.+|..+|++++|+
T Consensus 2 ~~a~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~la~~~~~~g~~~~A~ 73 (115)
T 2kat_A 2 QAITERLEAMLAQGTDN-----MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT---YSVAWKWLGKTLQGQGDRAGAR 73 (115)
T ss_dssp CCHHHHHHHHHTTTCCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC---cHHHHHHHHHHHHHcCCHHHHH
Confidence 35899999999999999 899999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHhcc
Q 007571 485 LDAILFINECSQ 496 (598)
Q Consensus 485 ~d~~kALel~~k 496 (598)
..|+++++..+.
T Consensus 74 ~~~~~al~~~~~ 85 (115)
T 2kat_A 74 QAWESGLAAAQS 85 (115)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhccc
Confidence 999999999876
No 55
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.11 E-value=2.1e-09 Score=105.45 Aligned_cols=106 Identities=19% Similarity=0.201 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
........|+.+++.|+|++|+..|.++++..|.+ ......++.++|.+|.++|++++|+..++++++++|+ ++.+
T Consensus 233 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~ 308 (359)
T 3ieg_A 233 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPSV-AEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPD---NVNA 308 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSS-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc---cHHH
Confidence 45556678999999999999999999999999986 3344577889999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.++..+|++++|+..|+++++..|+
T Consensus 309 ~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~ 338 (359)
T 3ieg_A 309 LKDRAEAYLIEEMYDEAIQDYEAAQEHNEN 338 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999876
No 56
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.11 E-value=1.4e-09 Score=105.38 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH--------cCChHHHHHHHHHHHHhCCC
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLL--------MQQPLAAISDATRALCLHNP 459 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylK--------LgdyeeAI~D~~kALeLdP~ 459 (598)
...+...|..+++.|+|++|+..|+++++..|.+ .....++.++|.||+. +|++++|+..++++++.+|+
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~--~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~ 129 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQID--PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPN 129 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCC--chhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcC
Confidence 6778999999999999999999999999999865 2347889999999999 99999999999999999998
Q ss_pred CCcCHHHH-----------------HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 460 LNRHAKSL-----------------WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 460 ~~~~~KAy-----------------yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+..+. +.+|.+|..+|++++|+..|+++++..|+
T Consensus 130 ---~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~ 180 (261)
T 3qky_A 130 ---HELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPD 180 (261)
T ss_dssp ---CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred ---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC
Confidence 54444 89999999999999999999999999886
No 57
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.11 E-value=2.4e-09 Score=94.96 Aligned_cols=101 Identities=14% Similarity=0.035 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
...+...|..++..|++++|+..|.++++..|.+ ..++.++|.++..+|++++|+..+.+++.++|+ ++.++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 113 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDN-----VKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI---NFNVR 113 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH---hHHHH
Confidence 3445566666666777777777777777666666 666666777777777777777777777777666 66666
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.+|.++..+|++++|+..|.++++..+.
T Consensus 114 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 142 (186)
T 3as5_A 114 FRLGVALDNLGRFDEAIDSFKIALGLRPN 142 (186)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHhcCcc
Confidence 66777777777777777777766666543
No 58
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.11 E-value=1.6e-09 Score=90.59 Aligned_cols=99 Identities=19% Similarity=0.121 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHH
Q 007571 390 VVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWR 469 (598)
Q Consensus 390 ~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyR 469 (598)
.+...|..++..|++++|+..|.++++..|.+ ...+.++|.++...|++++|+..+.+++.++|. +..+++.
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~~~ 74 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRS-----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR---SAEAWYN 74 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---CHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc-----hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC---chHHHHH
Confidence 34556777777777888888888777777776 677777777777777888888877777777777 7777777
Q ss_pred HHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 470 RAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 470 RAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+|.++...|++++|+..+.++++..+.
T Consensus 75 l~~~~~~~~~~~~A~~~~~~~~~~~~~ 101 (136)
T 2fo7_A 75 LGNAYYKQGDYDEAIEYYQKALELDPR 101 (136)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 777777778888887777777776553
No 59
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.11 E-value=8.3e-10 Score=108.36 Aligned_cols=100 Identities=21% Similarity=0.206 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|+.++..|+|++|+..|+++++.+|.+ +.++.++|.+++.+|++++|+..++++++++|+ +..++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 74 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN-----YIAYYRRATVFLAMGKSKAALPDLTKVIALKMD---FTAAR 74 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---cchHH
Confidence 5678899999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
+.+|.++..+|++++|+..|.++++..|
T Consensus 75 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 75 LQRGHLLLKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999876
No 60
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.10 E-value=2.6e-09 Score=100.36 Aligned_cols=102 Identities=25% Similarity=0.210 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC--
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH-- 463 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~-- 463 (598)
..+..+...|+.++..|+|++|+..|+++++.. .+ +.++.++|.+|..+|++++|+..+.++++++|+ +
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~ 73 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KD-----ITYLNNRAAAEYEKGEYETAISTLNDAVEQGRE---MRA 73 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CC-----THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---TTC
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-cc-----HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc---ccc
Confidence 468889999999999999999999999999999 66 789999999999999999999999999999987 5
Q ss_pred -----HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 464 -----AKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 464 -----~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.+++.+|.++..+|++++|+..|+++++..+.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 74 DYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred chHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 799999999999999999999999999997553
No 61
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.08 E-value=1.2e-09 Score=109.85 Aligned_cols=102 Identities=16% Similarity=0.054 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..+++.|+|++|+..|+++++..|.+ +.++.++|.+|.++|++++|+..++++++++|+ +..++
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~ 136 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD-----AEAWQFLGITQAENENEQAAIVALQRCLELQPN---NLKAL 136 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC---CHHHH
Confidence 4457888999999999999999999999999998 999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
+.+|.+|..+|++++|+..|+++++..|+.
T Consensus 137 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 166 (365)
T 4eqf_A 137 MALAVSYTNTSHQQDACEALKNWIKQNPKY 166 (365)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHccccHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999999998763
No 62
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.08 E-value=2.4e-09 Score=106.82 Aligned_cols=102 Identities=19% Similarity=0.111 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..+++.|+|++|+..|.+++...|.+ +.++.++|.+|..+|++++|+..++++++++|+ ++.++
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~---~~~~~ 288 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND-----YLLWNKLGATLANGNQSEEAVAAYRRALELQPG---YIRSR 288 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHHHH
Confidence 5678889999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
+.+|.+|..+|++++|+..|+++++..|+.
T Consensus 289 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 289 YNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999998874
No 63
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.07 E-value=2.9e-09 Score=89.04 Aligned_cols=101 Identities=20% Similarity=0.118 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
...+...|..++..|++++|+..|.+++...|.. ..++.++|.++..+|++++|+..+.+++...|. +..++
T Consensus 35 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 106 (136)
T 2fo7_A 35 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS-----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR---SAEAW 106 (136)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc-----hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---ChHHH
Confidence 3456778999999999999999999999999998 889999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.+|.++..+|++++|+..|.++++..|.
T Consensus 107 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 107 YNLGNAYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999988664
No 64
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.07 E-value=2.3e-09 Score=86.05 Aligned_cols=84 Identities=21% Similarity=0.144 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|..++..|+|++|+..|.++++..|.+ ..++.++|.+|.++|++++|+..++++++++|+ +..+
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~---~~~~ 79 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN---NAEA 79 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC---CHHH
Confidence 46678889999999999999999999999999998 899999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhh
Q 007571 467 LWRRAQAYDMLA 478 (598)
Q Consensus 467 yyRRAqAy~~LG 478 (598)
++.+|.++..+|
T Consensus 80 ~~~l~~~~~~~g 91 (91)
T 1na3_A 80 KQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC
Confidence 999999998765
No 65
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.07 E-value=1.7e-09 Score=103.56 Aligned_cols=100 Identities=7% Similarity=-0.077 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHH
Q 007571 390 VVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWR 469 (598)
Q Consensus 390 ~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyR 469 (598)
.+...|..++..|+|++|+..|.++++ .|.+ ......+|.++|.+|..+|++++|+..+.++++++|+ ++.+++.
T Consensus 39 ~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~ 113 (272)
T 3u4t_A 39 IYNRRAVCYYELAKYDLAQKDIETYFS-KVNA-TKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT---RLDMYGQ 113 (272)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHT-TSCT-TTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CTHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCc-hhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc---cHHHHHH
Confidence 444555555555555555555555555 3321 1122344555555555555555555555555555555 5555555
Q ss_pred HHHHHHHhhcHHHHHHHHHHHHHHh
Q 007571 470 RAQAYDMLALAKESLLDAILFINEC 494 (598)
Q Consensus 470 RAqAy~~LGdy~EAl~d~~kALel~ 494 (598)
+|.++..+|++++|+..|+++++..
T Consensus 114 l~~~~~~~~~~~~A~~~~~~al~~~ 138 (272)
T 3u4t_A 114 IGSYFYNKGNFPLAIQYMEKQIRPT 138 (272)
T ss_dssp HHHHHHHTTCHHHHHHHHGGGCCSS
T ss_pred HHHHHHHccCHHHHHHHHHHHhhcC
Confidence 5555555555555555555555553
No 66
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.06 E-value=1.3e-09 Score=109.67 Aligned_cols=103 Identities=16% Similarity=0.125 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..|+|++|+..|.++++..|.+ +.++.++|.+|.++|++++|+..++++++++|+ ++.++
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~ 284 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPED-----YSLWNRLGATLANGDRSEEAVEAYTRALEIQPG---FIRSR 284 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---chHHH
Confidence 4567789999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
+.+|.+|..+|++++|+..|+++++..|+..
T Consensus 285 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 315 (365)
T 4eqf_A 285 YNLGISCINLGAYREAVSNFLTALSLQRKSR 315 (365)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCcccC
Confidence 9999999999999999999999999998744
No 67
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.06 E-value=3.4e-09 Score=94.00 Aligned_cols=103 Identities=14% Similarity=-0.007 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
...+...|..++..|++++|+..|.+++...|.+ ..++.++|.++..+|++++|+..+.++++.+|. ++.++
T Consensus 76 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 147 (186)
T 3as5_A 76 VKVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN-----FNVRFRLGVALDNLGRFDEAIDSFKIALGLRPN---EGKVH 147 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh-----HHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCcc---chHHH
Confidence 4557788999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
+.+|.++..+|++++|+..++++++..|++.
T Consensus 148 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 148 RAIAFSYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 9999999999999999999999999988643
No 68
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.05 E-value=2.9e-09 Score=115.80 Aligned_cols=101 Identities=11% Similarity=-0.011 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..|+|++|+..|++|++++|.+ ..++.|+|.+|..+|++++|+..++++++++|+ +..++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~ 94 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGH-----PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE---HPGIA 94 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC---CHHHH
Confidence 4556677777777777777777777777777776 777777777777777777777777777777777 77777
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.+|.+|..+|++++|+..|+++++..|+
T Consensus 95 ~~la~~~~~~g~~~~A~~~~~~al~~~p~ 123 (568)
T 2vsy_A 95 LWLGHALEDAGQAEAAAAAYTRAHQLLPE 123 (568)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 77777777777777777777777777654
No 69
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.05 E-value=5.5e-09 Score=104.21 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..+++.|+|++|+..|+++++..|.+ ..++.++|.+|..+|++++|+..+.++++++|+ ++.++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~---~~~~~ 135 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH-----MEAWQYLGTTQAENEQELLAISALRRCLELKPD---NQTAL 135 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCC---CHHHH
Confidence 3456788999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
+.+|.++..+|++++|+..|.++++..|...
T Consensus 136 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 136 MALAVSFTNESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSTTTG
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcCcH
Confidence 9999999999999999999999999987643
No 70
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.05 E-value=4.9e-09 Score=98.06 Aligned_cols=101 Identities=16% Similarity=0.094 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
....+...|..++..|++++|+..|.++++..|.+ ..++.++|.+++++|++++|+..+.++++++|+ +..+
T Consensus 90 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~ 161 (243)
T 2q7f_A 90 AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMEN-----GDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN---DTEA 161 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCS-----HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc---cHHH
Confidence 34555666666667777777777777777766666 566666777777777777777777777777666 6666
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
++.+|.++..+|++++|+..|.++++..+
T Consensus 162 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 190 (243)
T 2q7f_A 162 RFQFGMCLANEGMLDEALSQFAAVTEQDP 190 (243)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 77777777777777777777776666654
No 71
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.05 E-value=1.4e-09 Score=116.91 Aligned_cols=100 Identities=10% Similarity=-0.055 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHc---------CCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHc--------CChHHHHHHHH
Q 007571 389 LVVKLEGNSLFSA---------GNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLM--------QQPLAAISDAT 451 (598)
Q Consensus 389 ~~lKeeGN~lfk~---------GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKL--------gdyeeAI~D~~ 451 (598)
..+...|..++.. |+|++|+..|.+|++++|.+ ..+|.|+|.+|+.+ |+|++|+..++
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~ 245 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD-----GRSWYILGNAYLSLYFNTGQNPKISQQALSAYA 245 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Confidence 5677888888888 99999999999999999999 99999999999999 99999999999
Q ss_pred HHHHhCC---CCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 452 RALCLHN---PLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 452 kALeLdP---~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+|++++| + ++.+|+.+|.+|..+|++++|+..|++++++.|+
T Consensus 246 ~al~~~p~~~~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~ 290 (474)
T 4abn_A 246 QAEKVDRKASS---NPDLHLNRATLHKYEESYGEALEGFSQAAALDPA 290 (474)
T ss_dssp HHHHHCGGGGG---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHhCCCccc---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 9999999 8 9999999999999999999999999999999876
No 72
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.04 E-value=7.7e-09 Score=95.03 Aligned_cols=100 Identities=9% Similarity=-0.059 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHH--hCCCCCcCH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLM-QQPLAAISDATRALC--LHNPLNRHA 464 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKL-gdyeeAI~D~~kALe--LdP~~~~~~ 464 (598)
...+...|..++..|++++|+..|.++++..|.+ ..++.++|.+|..+ |++++|+..++++++ .+|. ..
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~ 113 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDS-----AEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT---PY 113 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC---HH
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-----hHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc---hH
Confidence 4455556666666666666666666666666665 55666666666666 666666666666666 3444 55
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 465 KSLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 465 KAyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
.+++.+|.++..+|++++|+..|.++++..|
T Consensus 114 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 144 (225)
T 2vq2_A 114 IANLNKGICSAKQGQFGLAEAYLKRSLAAQP 144 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 6666666666666666666666666666544
No 73
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.04 E-value=3.4e-09 Score=108.93 Aligned_cols=102 Identities=14% Similarity=-0.038 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCH
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHA 464 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~ 464 (598)
...+..+...|..+++.|+|++|+..|++||+++|.+ +.+|+|+|.+|+.+|+|++|+.++++|++++|+ +.
T Consensus 193 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~---~~ 264 (336)
T 1p5q_A 193 ALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNN-----EKGLSRRGEAHLAVNDFELARADFQKVLQLYPN---NK 264 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS---CH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC---CH
Confidence 3457789999999999999999999999999999999 999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHhhcHHHH-HHHHHHHHHHh
Q 007571 465 KSLWRRAQAYDMLALAKES-LLDAILFINEC 494 (598)
Q Consensus 465 KAyyRRAqAy~~LGdy~EA-l~d~~kALel~ 494 (598)
.+++.+|.++..+|++++| ...|.+++...
T Consensus 265 ~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~ 295 (336)
T 1p5q_A 265 AAKTQLAVCQQRIRRQLAREKKLYANMFERL 295 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 44566666554
No 74
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.03 E-value=1.3e-09 Score=96.48 Aligned_cols=81 Identities=14% Similarity=0.081 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+...|..+++.|+|++|+..|++||+++|.+ +.+|.|+|.+|..+|+|++|+.++++||+++|+ +..
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~---~~~ 116 (126)
T 4gco_A 45 ENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF-----IKGYIRKAACLVAMREWSKAQRAYEDALQVDPS---NEE 116 (126)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred CCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh-----hHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcC---CHH
Confidence 456788999999999999999999999999999999 999999999999999999999999999999999 999
Q ss_pred HHHHHHHHH
Q 007571 466 SLWRRAQAY 474 (598)
Q Consensus 466 AyyRRAqAy 474 (598)
++..++.++
T Consensus 117 a~~~l~~~l 125 (126)
T 4gco_A 117 AREGVRNCL 125 (126)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 998888764
No 75
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.02 E-value=1.1e-09 Score=90.37 Aligned_cols=90 Identities=14% Similarity=0.012 Sum_probs=82.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHH-HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHH
Q 007571 392 KLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVV-LYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRR 470 (598)
Q Consensus 392 KeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~-ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRR 470 (598)
.+.|..+++.|+|++|+..|.++++..|.+ .. ++.++|.+|..+|++++|+..+.++++++|+ +..++++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~- 74 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVG-----KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPD---SPALQAR- 74 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSST-----HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---STHHHHH-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCc-----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---cHHHHHH-
Confidence 467999999999999999999999999998 88 9999999999999999999999999999999 8887754
Q ss_pred HHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 471 AQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 471 AqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
+.+.+|+..|.+++...|..
T Consensus 75 -------~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 75 -------KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp -------HHHHHHHHHHCCTTHHHHCC
T ss_pred -------HHHHHHHHHHHHHhccCccc
Confidence 78888999999888888763
No 76
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.02 E-value=2.6e-09 Score=109.84 Aligned_cols=103 Identities=21% Similarity=0.198 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+...|+.+++.|+|++|+..|+++++..|.+ +.++.++|.+|+.+|++++|+..+.++++++|+ ++.
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~ 95 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN-----YIAYYRRATVFLAMGKSKAALPDLTKVIQLKMD---FTA 95 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC---cHH
Confidence 467889999999999999999999999999999998 999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+++.+|.+|..+|++++|+..|.++++..|.
T Consensus 96 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 126 (450)
T 2y4t_A 96 ARLQRGHLLLKQGKLDEAEDDFKKVLKSNPS 126 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999988664
No 77
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.02 E-value=4.7e-09 Score=98.16 Aligned_cols=102 Identities=13% Similarity=-0.011 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
....+...|..+++.|++++|+..|.++++..|.+ ..++.++|.+++++|++++|+..+.++++.+|+ +..+
T Consensus 124 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~ 195 (243)
T 2q7f_A 124 NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEND-----TEARFQFGMCLANEGMLDEALSQFAAVTEQDPG---HADA 195 (243)
T ss_dssp SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTT---CHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc---cHHH
Confidence 46677888999999999999999999999999988 889999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.++..+|++++|+..|+++++..|+
T Consensus 196 ~~~la~~~~~~~~~~~A~~~~~~~~~~~p~ 225 (243)
T 2q7f_A 196 FYNAGVTYAYKENREKALEMLDKAIDIQPD 225 (243)
T ss_dssp HHHHHHHHHHTTCTTHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHccCcc
Confidence 999999999999999999999999998775
No 78
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.01 E-value=4.8e-10 Score=126.34 Aligned_cols=102 Identities=10% Similarity=-0.055 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+...|..++..|+|++|+..|++|++++|.+ ..+|.|+|.+|.++|+|++ +..|++|++++|+ +..
T Consensus 465 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~-----~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~---~~~ 535 (681)
T 2pzi_A 465 WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGE-----LAPKLALAATAELAGNTDE-HKFYQTVWSTNDG---VIS 535 (681)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC-----SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTT---CHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----hHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCc---hHH
Confidence 356678889999999999999999999999999998 8999999999999999999 9999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+|+.+|.+|..+|++++|+.+|++++++.|+
T Consensus 536 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 566 (681)
T 2pzi_A 536 AAFGLARARSAEGDRVGAVRTLDEVPPTSRH 566 (681)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTSCTTSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhcccCcc
Confidence 9999999999999999999999999988765
No 79
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.01 E-value=6.7e-09 Score=91.61 Aligned_cols=101 Identities=10% Similarity=0.022 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..|+|++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..+.++++++|. +..++
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~---~~~~~ 118 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY-----IKGYYRRAASNMALGKFRAALRDYETVVKVKPH---DKDAK 118 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC---CHHHH
Confidence 5567889999999999999999999999999998 899999999999999999999999999999999 88887
Q ss_pred --HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 --WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 --yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.++..+...|++++|+..+.++......
T Consensus 119 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 119 MKYQECNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchHHHhcc
Confidence 44555588999999999999998887654
No 80
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.01 E-value=6e-09 Score=89.90 Aligned_cols=112 Identities=17% Similarity=0.170 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC---C
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR-SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL---N 461 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~-~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~---~ 461 (598)
..+..+...|..++..|+|++|+..|.+++++.+.. .......++.++|.+|..+|++++|+..+.+++.+.+.. .
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 86 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 86 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcH
Confidence 467889999999999999999999999999987642 234556899999999999999999999999999886541 0
Q ss_pred cCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 462 RHAKSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 462 ~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
....+++.+|.++..+|++++|+..++++++.....
T Consensus 87 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 122 (164)
T 3ro3_A 87 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 122 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 026789999999999999999999999999987653
No 81
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.00 E-value=1.3e-08 Score=98.92 Aligned_cols=138 Identities=13% Similarity=0.067 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..|++++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..++++++++|+ +..++
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~ 243 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDD-----AQLWNKLGATLANGNRPQEALDAYNRALDINPG---YVRVM 243 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---CHHHH
Confidence 5567888999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhccCCCCchhhccCChHHHHHHHHHHHHHHHHHHHHHHHhc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQSNDPDLSLRQNKVPDYAERLVKKQMRAAWLFREAAIKH 534 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k~~d~~~~~r~~Ki~~~ierlL~Kqk~a~~~f~eA~~k~ 534 (598)
+.+|.++..+|++++|+..|+++++..|........ ........+...+.........+.+|...+
T Consensus 244 ~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 309 (327)
T 3cv0_A 244 YNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGE-ASREATRSMWDFFRMLLNVMNRPDLVELTY 309 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC------CCTHHHHHHHHHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCcccccccc-chhhcCHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 999999999999999999999999998863321100 001113344455555555555555655553
No 82
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.00 E-value=3.4e-09 Score=107.75 Aligned_cols=102 Identities=19% Similarity=0.054 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|+.+++.|+|++|+..|.+++++.|.. ..+|.++|.++.++|++++|+..+.++++++|+ +..+
T Consensus 66 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~~ 137 (388)
T 1w3b_A 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDF-----IDGYINLAAALVAAGDMEGAVQAYVSALQYNPD---LYCV 137 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT---CTHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcch-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHHH
Confidence 46678899999999999999999999999999998 889999999999999999999999999999999 8999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+..+|.++..+|++++|+..|.++++..|+
T Consensus 138 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 167 (388)
T 1w3b_A 138 RSDLGNLLKALGRLEEAKACYLKAIETQPN 167 (388)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999998765
No 83
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.99 E-value=1.9e-08 Score=97.88 Aligned_cols=100 Identities=16% Similarity=-0.041 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC---------CC
Q 007571 389 LVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLH---------NP 459 (598)
Q Consensus 389 ~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLd---------P~ 459 (598)
..+...|..++..|++++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..+++++++. |.
T Consensus 160 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 234 (330)
T 3hym_B 160 LPMLYIGLEYGLTNNSKLAERFFSQALSIAPED-----PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK 234 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCC-----hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH
Confidence 445668899999999999999999999999988 8889999999999999999999999999886 55
Q ss_pred CCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 460 LNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 460 ~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+++.+|.++..+|++++|+..|+++++..|+
T Consensus 235 ---~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 268 (330)
T 3hym_B 235 ---WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ 268 (330)
T ss_dssp ---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred ---HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc
Confidence 6789999999999999999999999999998765
No 84
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.98 E-value=1.3e-08 Score=93.41 Aligned_cols=102 Identities=14% Similarity=0.052 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH--hCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCc
Q 007571 386 AAALVVKLEGNSLFSA-GNISGAASKYSEALA--LCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNR 462 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~-GdY~eAIe~YskALe--l~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~ 462 (598)
.....+...|..++.. |++++|+..|.++++ ..|.. ..++.++|.++..+|++++|+..+.++++.+|.
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--- 145 (225)
T 2vq2_A 74 DSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTP-----YIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ--- 145 (225)
T ss_dssp TCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---
T ss_pred CChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcch-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---
Confidence 3567788899999999 999999999999999 44544 789999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 463 HAKSLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 463 ~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
++.+++.+|.++..+|++++|+..|+++++..|
T Consensus 146 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 146 FPPAFKELARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred CchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999977
No 85
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.98 E-value=1.1e-09 Score=123.58 Aligned_cols=101 Identities=16% Similarity=0.034 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|..++..|+|++|+..|++|++.+|.+ ..+|.|+|.+|+.+|+|++|+.++++|++++|+ ++.+
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~---~~~~ 503 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAERVGWR-----WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG---ELAP 503 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT---CSHH
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---ChHH
Confidence 35678889999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.++..+|++++ +..|+++++..|+
T Consensus 504 ~~~lg~~~~~~g~~~~-~~~~~~al~~~P~ 532 (681)
T 2pzi_A 504 KLALAATAELAGNTDE-HKFYQTVWSTNDG 532 (681)
T ss_dssp HHHHHHHHHHHTCCCT-TCHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCChHH-HHHHHHHHHhCCc
Confidence 9999999999999999 9999999999876
No 86
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.98 E-value=1.3e-09 Score=100.61 Aligned_cols=81 Identities=6% Similarity=-0.207 Sum_probs=76.9
Q ss_pred HHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHH
Q 007571 409 SKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAI 488 (598)
Q Consensus 409 e~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~ 488 (598)
..|.+++.++|.+ +..+.++|.+++++|+|++|+..+++++.++|+ ++.+|+.+|.+|..+|+|++|+..|.
T Consensus 23 ~~l~~al~l~p~~-----~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~---~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 23 ATLKDINAIPDDM-----MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY---NVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp CCTGGGCCSCHHH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHhCCCHHH-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 4478889999988 999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHhccC
Q 007571 489 LFINECSQS 497 (598)
Q Consensus 489 kALel~~k~ 497 (598)
+++++.|++
T Consensus 95 ~al~l~P~~ 103 (151)
T 3gyz_A 95 VAFALGKND 103 (151)
T ss_dssp HHHHHSSSC
T ss_pred HHHhhCCCC
Confidence 999999873
No 87
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.98 E-value=7.7e-09 Score=98.00 Aligned_cols=102 Identities=10% Similarity=-0.118 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH--hCCCCCcCH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALC--LHNPLNRHA 464 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALe--LdP~~~~~~ 464 (598)
.+..+...|..++..|+|++|+..|.++++..|.. ..++.++|.+|..+|++++|+..+.+++. .+|. +.
T Consensus 70 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~---~~ 141 (252)
T 2ho1_A 70 SADAHAALAVVFQTEMEPKLADEEYRKALASDSRN-----ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPE---RS 141 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTT---HH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-----HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcc---cH
Confidence 35566667777777777777777777777777766 67777777777777777777777777777 6666 67
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 465 KSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 465 KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.+++.+|.++..+|++++|+..|.++++..+.
T Consensus 142 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 173 (252)
T 2ho1_A 142 RVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN 173 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc
Confidence 77777777777777777777777777776553
No 88
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.98 E-value=1.1e-08 Score=105.26 Aligned_cols=106 Identities=19% Similarity=0.203 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
........|+.+++.|+|++|+..|+++++..|.+ ......++.++|.++.++|++++|+..++++++++|+ ++.+
T Consensus 256 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~---~~~~ 331 (450)
T 2y4t_A 256 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPSI-AEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPD---NVNA 331 (450)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSS-HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc-hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc---cHHH
Confidence 44556778999999999999999999999999985 3344668999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.++..+|++++|+..|+++++..|+
T Consensus 332 ~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 361 (450)
T 2y4t_A 332 LKDRAEAYLIEEMYDEAIQDYETAQEHNEN 361 (450)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCcc
Confidence 999999999999999999999999998776
No 89
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.98 E-value=3.5e-09 Score=113.91 Aligned_cols=101 Identities=19% Similarity=0.087 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 387 AALVVKLEGNSLFSAGNI-SGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY-~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
.+..+...|..++..|+| ++|+..|.+|++++|.+ +.+|.++|.+|.++|++++|+..+++|++++|+ . .
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~-~ 171 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL-----VEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN---K-V 171 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC---H-H
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC---H-H
Confidence 467889999999999999 99999999999999999 999999999999999999999999999999987 4 9
Q ss_pred HHHHHHHHHHHh---------hcHHHHHHHHHHHHHHhcc
Q 007571 466 SLWRRAQAYDML---------ALAKESLLDAILFINECSQ 496 (598)
Q Consensus 466 AyyRRAqAy~~L---------Gdy~EAl~d~~kALel~~k 496 (598)
+++.+|.+|..+ |++++|+..|+++++..|+
T Consensus 172 ~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~ 211 (474)
T 4abn_A 172 SLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL 211 (474)
T ss_dssp HHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC
Confidence 999999999999 9999999999999999876
No 90
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.97 E-value=5.1e-09 Score=100.15 Aligned_cols=101 Identities=15% Similarity=0.083 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..|+|++|+..|.++++..|.. ..++.++|.+|..+|++++|+..++++++++|. ++.++
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~ 145 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTR-----LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTT---DPKVF 145 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----THHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCC---CHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCccc-----HHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCC---cHHHH
Confidence 5557888899999999999999999999999988 788999999999999999999999999999998 89999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.+|...+..+++++|+..|.++++..|.
T Consensus 146 ~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 174 (272)
T 3u4t_A 146 YELGQAYYYNKEYVKADSSFVKVLELKPN 174 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 99995555566999999999999988775
No 91
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.97 E-value=1.4e-08 Score=98.78 Aligned_cols=103 Identities=16% Similarity=0.021 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..|+|++|+..|+++++..|.. ..++.++|.++..+|++++|+..+.++++++|+ +..++
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~ 92 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPER-----EEAWRSLGLTQAENEKDGLAIIALNHARMLDPK---DIAVH 92 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcC---CHHHH
Confidence 3457788999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
+.+|.++..+|++++|+..|.++++..|...
T Consensus 93 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 123 (327)
T 3cv0_A 93 AALAVSHTNEHNANAALASLRAWLLSQPQYE 123 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSTTTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCccH
Confidence 9999999999999999999999999987644
No 92
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.96 E-value=1.1e-08 Score=96.81 Aligned_cols=103 Identities=20% Similarity=0.130 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALA--LCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH 463 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALe--l~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~ 463 (598)
.....+...|..++..|+|++|+..|.+++. ..|.. ..++.++|.+|+.+|++++|+..+.++++++|. +
T Consensus 103 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~-----~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~---~ 174 (252)
T 2ho1_A 103 RNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPER-----SRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN---Q 174 (252)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC---C
T ss_pred CcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCccc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc---c
Confidence 3567788899999999999999999999999 66665 889999999999999999999999999999999 9
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 464 AKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 464 ~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
..+++.+|.++..+|++++|+..|+++++..+.
T Consensus 175 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 207 (252)
T 2ho1_A 175 PSVALEMADLLYKEREYVPARQYYDLFAQGGGQ 207 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 999999999999999999999999999987664
No 93
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.95 E-value=1e-08 Score=104.12 Aligned_cols=102 Identities=22% Similarity=0.069 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
....+...|..+...|+|++|+..|.+++.+.|.+ ..++.|+|.+|.++|++++|+..++++++++|+ ++.+
T Consensus 202 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~~ 273 (388)
T 1w3b_A 202 FLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNH-----AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH---FPDA 273 (388)
T ss_dssp CHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS---CHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC---CHHH
Confidence 34556677777777777777777777777777776 777777777777777777777777777777777 7777
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 467 LWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 467 yyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+|.++...|++++|+..|+++++..|.
T Consensus 274 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 303 (388)
T 1w3b_A 274 YCNLANALKEKGSVAEAEDCYNTALRLCPT 303 (388)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCcc
Confidence 777777777777888887777777777654
No 94
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.94 E-value=2.2e-08 Score=96.50 Aligned_cols=108 Identities=18% Similarity=0.206 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCCC
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL------HNPL 460 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL------dP~~ 460 (598)
.+..+...|..++..|+|++|+..|+++++..|.+ ......++.++|.+|..+|++++|+..+.+++.+ .|.
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~- 81 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTED-LKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLG- 81 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH-
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCccc-HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHH-
Confidence 35678889999999999999999999999999885 4455788999999999999999999999999988 444
Q ss_pred CcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 461 NRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 461 ~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
...+++.+|.++..+|++++|+..|.++++..+...
T Consensus 82 --~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 117 (338)
T 3ro2_A 82 --EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 117 (338)
T ss_dssp --HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc
Confidence 688999999999999999999999999999988643
No 95
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.94 E-value=1.3e-08 Score=99.16 Aligned_cols=102 Identities=11% Similarity=-0.138 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..|+|++|+..|.++++..|.. ...+.++|.+|..+|++++|+..++++++++|+ ++.++
T Consensus 125 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~ 196 (330)
T 3hym_B 125 GPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGC-----HLPMLYIGLEYGLTNNSKLAERFFSQALSIAPE---DPFVM 196 (330)
T ss_dssp THHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTC-----SHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT---CHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhcccc-----HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC---ChHHH
Confidence 4457889999999999999999999999999998 788999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
+.+|.++..+|++++|+..|+++++..+..
T Consensus 197 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 226 (330)
T 3hym_B 197 HEVGVVAFQNGEWKTAEKWFLDALEKIKAI 226 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999998653
No 96
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.94 E-value=1.1e-09 Score=99.75 Aligned_cols=95 Identities=12% Similarity=-0.013 Sum_probs=84.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHH
Q 007571 394 EGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQA 473 (598)
Q Consensus 394 eGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqA 473 (598)
.++.++..|+|++|+..|.+++...|.+ ..++.++|.+|+.+|+|++|+..+.++++++|+ ++.+++.+|.+
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~la~~ 87 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQN-----SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE---NAELYAALATV 87 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCSC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS---CHHHHHHHHHH
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---CHHHHHHHHHH
Confidence 3455678899999999999999999998 899999999999999999999999999999999 99999999999
Q ss_pred -HHHhhcH--HHHHHHHHHHHHHhcc
Q 007571 474 -YDMLALA--KESLLDAILFINECSQ 496 (598)
Q Consensus 474 -y~~LGdy--~EAl~d~~kALel~~k 496 (598)
+...|++ ++|+..|.++++..|.
T Consensus 88 l~~~~~~~~~~~A~~~~~~al~~~p~ 113 (177)
T 2e2e_A 88 LYYQASQHMTAQTRAMIDKALALDSN 113 (177)
T ss_dssp HHHHTTTCCCHHHHHHHHHHHHHCTT
T ss_pred HHHhcCCcchHHHHHHHHHHHHhCCC
Confidence 8899999 9999999999999775
No 97
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.93 E-value=6.4e-09 Score=91.75 Aligned_cols=71 Identities=8% Similarity=-0.046 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 424 KERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 424 ~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
.+.+.++.|+|.++++.|+|++|+..|++||+++|+ ++.+|+.+|.+|..+|+|++|+.+|.+++++.|+.
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~---~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS---NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc
Confidence 456889999999999999999999999999999999 99999999999999999999999999999998864
No 98
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.93 E-value=1.4e-08 Score=97.21 Aligned_cols=104 Identities=13% Similarity=0.023 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH------------------cCChHHHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLL------------------MQQPLAAISD 449 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylK------------------LgdyeeAI~D 449 (598)
...+...|..+++.|+|++|+..|+++++..|.+ .....++.++|.+|.. +|++++|+..
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~--~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 118 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH--PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSD 118 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--TTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCC--CcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHH
Confidence 4568889999999999999999999999999987 2234578889999887 5799999999
Q ss_pred HHHHHHhCCCCCcCHHHH-----------------HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 450 ATRALCLHNPLNRHAKSL-----------------WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 450 ~~kALeLdP~~~~~~KAy-----------------yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++++++..|+ +..+. +.+|.+|...|++++|+..|+++++..|+
T Consensus 119 ~~~~l~~~P~---~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~ 179 (225)
T 2yhc_A 119 FSKLVRGYPN---SQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPD 179 (225)
T ss_dssp HHHHHTTCTT---CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHCcC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcC
Confidence 9999999999 55433 67899999999999999999999999886
No 99
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.92 E-value=7.2e-09 Score=95.21 Aligned_cols=104 Identities=12% Similarity=-0.018 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHhCCCCCc
Q 007571 384 KQAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHL-LMQQPLAAISDATRALCLHNPLNR 462 (598)
Q Consensus 384 ~~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cyl-KLgdyeeAI~D~~kALeLdP~~~~ 462 (598)
....+..+...|..+...|++++|+..|.+++...| + +..+..++.+.+ ..++..+|+..++++++++|+
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~-----~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~--- 106 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-D-----NSYKSLIAKLELHQQAAESPELKRLEQELAANPD--- 106 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-C-----HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTT---
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-C-----hHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCC---
Confidence 456778888888888889999999999988888888 6 444444443322 333445678899999999999
Q ss_pred CHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 463 HAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 463 ~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++.+++.+|.++..+|++++|+..|.++++..|.
T Consensus 107 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~ 140 (176)
T 2r5s_A 107 NFELACELAVQYNQVGRDEEALELLWNILKVNLG 140 (176)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc
Confidence 9999999999999999999999999999999875
No 100
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.91 E-value=5.3e-09 Score=88.30 Aligned_cols=72 Identities=13% Similarity=0.036 Sum_probs=66.4
Q ss_pred CCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 418 CPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 418 ~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
+|.+ +.++.++|.+|+.+|+|++|+..++++++++|+ ++.+|+.+|.+|..+|++++|+..|++++++.++.
T Consensus 3 ~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 3 DPED-----PFTRYALAQEHLKHDNASRALALFEELVETDPD---YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp --CC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CccC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 5777 899999999999999999999999999999999 99999999999999999999999999999998763
No 101
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.90 E-value=2.1e-08 Score=101.96 Aligned_cols=107 Identities=17% Similarity=0.171 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCC
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL------HNP 459 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL------dP~ 459 (598)
..+..+...|..++..|+|++|+..|+++++..|.+ ......++.++|.+|..+|++++|+..+.+++++ +|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTED-LRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC-HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccC-hhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 467888899999999999999999999999999986 4445679999999999999999999999999998 566
Q ss_pred CCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 460 LNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 460 ~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
...+++.+|.+|..+|++++|+..|.++++....
T Consensus 125 ---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 158 (411)
T 4a1s_A 125 ---EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQ 158 (411)
T ss_dssp ---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999765
No 102
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.90 E-value=1.9e-08 Score=100.30 Aligned_cols=113 Identities=12% Similarity=-0.072 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc-hHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHhCCCCCc-
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRS-KKERVVLYSNRAQCHLLM-QQPLAAISDATRALCLHNPLNR- 462 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~-~~~~a~ly~NRA~cylKL-gdyeeAI~D~~kALeLdP~~~~- 462 (598)
..+..+.+.|+.+.+.|+|++|+..|.+|+++.|... ....+.++.|+|.+|..+ |++++|+..+++|+++.|....
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 3578899999999999999999999999999987532 223467899999999995 9999999999999999886100
Q ss_pred --CHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 463 --HAKSLWRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 463 --~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
...++.++|.++..+|+|++|+..|+++++..+...
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 157899999999999999999999999999988643
No 103
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.90 E-value=1.6e-08 Score=101.79 Aligned_cols=113 Identities=15% Similarity=0.092 Sum_probs=96.1
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHh
Q 007571 398 LFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDML 477 (598)
Q Consensus 398 lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~L 477 (598)
+...|+|++|+..|+++++..|.+ +.+++|+|.++.++|++++|+..+++||+++|+ ++.+++++|.++..+
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~~-----~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~---~~~~l~~l~~~~~~~ 247 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSPT-----LLLLNGQAACHMAQGRWEAAEGVLQEALDKDSG---HPETLINLVVLSQHL 247 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHT
T ss_pred HhCchHHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHc
Confidence 345689999999999999999998 999999999999999999999999999999999 999999999999999
Q ss_pred hcHHHH-HHHHHHHHHHhccCCCCchhhccCChHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 007571 478 ALAKES-LLDAILFINECSQSNDPDLSLRQNKVPDYAERLVKKQMRAAWLFREAAIKHG 535 (598)
Q Consensus 478 Gdy~EA-l~d~~kALel~~k~~d~~~~~r~~Ki~~~ierlL~Kqk~a~~~f~eA~~k~~ 535 (598)
|++.++ ...++++++..|++. .+ .....+...|.++..++.
T Consensus 248 g~~~eaa~~~~~~~~~~~P~~~---------~~--------~d~~~~~~~fd~~~~~~~ 289 (291)
T 3mkr_A 248 GKPPEVTNRYLSQLKDAHRSHP---------FI--------KEYRAKENDFDRLVLQYA 289 (291)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCH---------HH--------HHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHhCCCCh---------HH--------HHHHHHHHHHHHHHHHcC
Confidence 999874 678899999988622 11 223445566777776653
No 104
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.89 E-value=3.3e-09 Score=96.25 Aligned_cols=80 Identities=4% Similarity=-0.193 Sum_probs=76.4
Q ss_pred HHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHH
Q 007571 409 SKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAI 488 (598)
Q Consensus 409 e~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~ 488 (598)
..|.+++.++|.+ ...+.++|.+++..|+|++|+..+++++.++|+ ++.+++.+|.++..+|++++|+..|.
T Consensus 8 ~~~~~al~~~p~~-----~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~ 79 (148)
T 2vgx_A 8 GTIAMLNEISSDT-----LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY---DSRFFLGLGACRQAMGQYDLAIHSYS 79 (148)
T ss_dssp CSHHHHTTCCHHH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhHHHHHcCCHhh-----HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc---cHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4588999999987 899999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHhcc
Q 007571 489 LFINECSQ 496 (598)
Q Consensus 489 kALel~~k 496 (598)
+++++.|+
T Consensus 80 ~al~l~p~ 87 (148)
T 2vgx_A 80 YGAVMDIX 87 (148)
T ss_dssp HHHHHSTT
T ss_pred HHHhcCCC
Confidence 99999886
No 105
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.89 E-value=1.2e-08 Score=101.79 Aligned_cols=112 Identities=12% Similarity=-0.001 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCC---
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR-SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLN--- 461 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~-~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~--- 461 (598)
+.+..+...|+.+...|+|++|+..|.+|+++.+.. .....+.+|.|+|.+|.++|+|++|+..+++|+++.|...
T Consensus 35 ~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~ 114 (292)
T 1qqe_A 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFR 114 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 345566677888999999999999999999986532 1234578999999999999999999999999999987510
Q ss_pred cCHHHHHHHHHHHHHh-hcHHHHHHHHHHHHHHhccC
Q 007571 462 RHAKSLWRRAQAYDML-ALAKESLLDAILFINECSQS 497 (598)
Q Consensus 462 ~~~KAyyRRAqAy~~L-Gdy~EAl~d~~kALel~~k~ 497 (598)
....++..+|.+|... |++++|+..|++++++.+..
T Consensus 115 ~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~ 151 (292)
T 1qqe_A 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD 151 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC
Confidence 0157899999999995 99999999999999998863
No 106
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.88 E-value=1.7e-08 Score=100.14 Aligned_cols=109 Identities=9% Similarity=0.012 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC---
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALA---LCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL--- 460 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALe---l~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~--- 460 (598)
.+..+...|..++..|+|++|+..|.+|++ ..|.. ....+.++.|+|.+|.++|+|++|+..+.+|+++.+..
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~-~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN-EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc-ccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 467889999999999999999999999994 45543 22334799999999999999999999999999886431
Q ss_pred CcCHHHHHHHHHHHHHhhcHHHH-HHHHHHHHHHhcc
Q 007571 461 NRHAKSLWRRAQAYDMLALAKES-LLDAILFINECSQ 496 (598)
Q Consensus 461 ~~~~KAyyRRAqAy~~LGdy~EA-l~d~~kALel~~k 496 (598)
.....+|+++|.+|..+|++++| ...|++++.+...
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~ 269 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 11278999999999999999999 7779999988765
No 107
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.88 E-value=1.8e-08 Score=100.86 Aligned_cols=102 Identities=11% Similarity=-0.008 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHH------------------
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISD------------------ 449 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D------------------ 449 (598)
...+...|..+...|++++|+..|.++++.+|.+ ..++.++|.+++.+|++++|+..
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~-----~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~ 191 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQN-----GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVA 191 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSC-----HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcc-----hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHH
Confidence 4557788999999999999999999999999998 88999999999999998887644
Q ss_pred ----------------HHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 450 ----------------ATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 450 ----------------~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
+.+++.++|+ ++.+++.+|.+|...|++++|+..|.++++..|+.
T Consensus 192 ~~~l~~~~~~~~a~~~l~~al~~~P~---~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 192 QIELLXQAADTPEIQQLQQQVAENPE---DAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHHHhhcccCccHHHHHHHHhcCCc---cHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 5556778899 99999999999999999999999999999998763
No 108
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.88 E-value=1.8e-08 Score=95.43 Aligned_cols=105 Identities=18% Similarity=-0.010 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh----
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALC-----PMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL---- 456 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~-----P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL---- 456 (598)
..+..+...|..++..|+|++|+..|.+++++. +.. .....++.++|.+|..+|++++|+..+.+++.+
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDH--PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTC--HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcc--hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 357789999999999999999999999999884 222 345889999999999999999999999999998
Q ss_pred ----CCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 457 ----HNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 457 ----dP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
+|. ...+++.+|.++..+|++++|+..|+++++...
T Consensus 119 ~~~~~~~---~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 158 (283)
T 3edt_B 119 LGKFHPD---VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYA 158 (283)
T ss_dssp HCTTCHH---HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred cCCCChH---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 466 789999999999999999999999999999843
No 109
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.87 E-value=3.2e-08 Score=99.29 Aligned_cols=107 Identities=17% Similarity=0.197 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCCC
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL------HNPL 460 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL------dP~~ 460 (598)
.+..+...|..++..|+|++|+..|+++++..|.+ ....+.++.++|.+|+.+|+|++|+..+++|+.+ .|.
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~- 85 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTED-LKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLG- 85 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH-
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCccc-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHH-
Confidence 35678889999999999999999999999999885 4455789999999999999999999999999988 344
Q ss_pred CcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 461 NRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 461 ~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
...+++.+|.++..+|++++|+..|.++++..+..
T Consensus 86 --~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 86 --EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp --HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 68899999999999999999999999999998763
No 110
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.86 E-value=2.5e-08 Score=108.43 Aligned_cols=104 Identities=13% Similarity=-0.093 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|..++..|+|++|+..|.+|++++|.+ ..++.|+|.+|.++|++++|+..++++++++|+ +..+
T Consensus 56 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~---~~~~ 127 (568)
T 2vsy_A 56 HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEH-----PGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE---EPYI 127 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHH
Confidence 35678899999999999999999999999999998 899999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHh---hcHHHHHHHHHHHHHHhccCC
Q 007571 467 LWRRAQAYDML---ALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 467 yyRRAqAy~~L---Gdy~EAl~d~~kALel~~k~~ 498 (598)
++.+|.++..+ |++++|+..|+++++..|...
T Consensus 128 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 162 (568)
T 2vsy_A 128 TAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAV 162 (568)
T ss_dssp HHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHHhcCCccc
Confidence 99999999999 999999999999999988743
No 111
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.85 E-value=5.2e-08 Score=102.29 Aligned_cols=103 Identities=10% Similarity=-0.085 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..|+|++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..++++++++|+ ++.++
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~---~~~~~ 381 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPEN-----VYPYIQLACLLYKQGKFTESEAFFNETKLKFPT---LPEVP 381 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CTHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---ChHHH
Confidence 4568889999999999999999999999999998 789999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
+.+|.++..+|++++|+..|+++++..|...
T Consensus 382 ~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 412 (537)
T 3fp2_A 382 TFFAEILTDRGDFDTAIKQYDIAKRLEEVQE 412 (537)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHcCCcch
Confidence 9999999999999999999999999988754
No 112
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.85 E-value=2.1e-08 Score=107.55 Aligned_cols=93 Identities=13% Similarity=-0.000 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+.+.|..+++.|+|++|+..|++||+++|.+ +.+|+|+|.+|+.+|+|++|+.++++|++++|+ +..
T Consensus 315 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~---~~~ 386 (457)
T 1kt0_A 315 FLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSAN-----EKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQ---NKA 386 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-------C
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---CHH
Confidence 357788999999999999999999999999999999 999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHhhcHHHHHHH
Q 007571 466 SLWRRAQAYDMLALAKESLLD 486 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d 486 (598)
+++.++.++..++++++|...
T Consensus 387 a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 387 ARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988643
No 113
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.85 E-value=3.1e-08 Score=94.35 Aligned_cols=93 Identities=11% Similarity=-0.040 Sum_probs=85.7
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhc
Q 007571 400 SAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLAL 479 (598)
Q Consensus 400 k~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGd 479 (598)
..|+|++|+..|.++++..|.. ....+.++.++|.+|..+|++++|+..+.++++++|+ ++.+++.+|.++..+|+
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~~~la~~~~~~~~ 92 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALT-DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD---MPEVFNYLGIYLTQAGN 92 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHHhccccc-CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC---cHHHHHHHHHHHHHccC
Confidence 4578999999999999986543 3456899999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHHHhcc
Q 007571 480 AKESLLDAILFINECSQ 496 (598)
Q Consensus 480 y~EAl~d~~kALel~~k 496 (598)
+++|+..|.++++..|.
T Consensus 93 ~~~A~~~~~~al~~~~~ 109 (275)
T 1xnf_A 93 FDAAYEAFDSVLELDPT 109 (275)
T ss_dssp HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhcCcc
Confidence 99999999999999876
No 114
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.84 E-value=1.5e-08 Score=100.50 Aligned_cols=112 Identities=10% Similarity=0.008 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC---C
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPM--RSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL---N 461 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~--~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~---~ 461 (598)
.+..+...|+.++..|+|++|+..|.+|++.... ......+.+|.|+|.+|.++|+|++|+..+.+|+++.+.. .
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~ 233 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHH
Confidence 4667899999999999999999999999975321 1345668899999999999999999999999999987551 0
Q ss_pred cCHHHHHHHHHHHHHhh-cHHHHHHHHHHHHHHhccCC
Q 007571 462 RHAKSLWRRAQAYDMLA-LAKESLLDAILFINECSQSN 498 (598)
Q Consensus 462 ~~~KAyyRRAqAy~~LG-dy~EAl~d~~kALel~~k~~ 498 (598)
....+|+.+|.+|..+| ++++|+..|++|+.+.....
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~~ 271 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILE 271 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhC
Confidence 02789999999999999 57999999999999877543
No 115
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.83 E-value=1.5e-08 Score=95.91 Aligned_cols=106 Identities=14% Similarity=-0.028 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh----
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALC-----PMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL---- 456 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~-----P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL---- 456 (598)
..+..+...|..++..|+|++|+..|.+|+.+. |.. .....++.|+|.+|..+|++++|+..+.+++++
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFH--PDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCC--hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 457789999999999999999999999999983 221 334899999999999999999999999999999
Q ss_pred ----CCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 457 ----HNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 457 ----dP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+|. ...+++.+|.++..+|++++|+..|.++++..+.
T Consensus 161 ~~~~~~~---~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 161 LGPDDPN---VAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp SCTTCHH---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHH---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 676 7899999999999999999999999999998654
No 116
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.82 E-value=4.5e-08 Score=84.35 Aligned_cols=110 Identities=16% Similarity=0.179 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC---Cc
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMR-SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL---NR 462 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~-~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~---~~ 462 (598)
.+..+...|..++..|+|++|+..|.+++++.+.. .......++.|+|.++..+|++++|+..+.+++++.+.. ..
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 127 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIG 127 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHh
Confidence 46788899999999999999999999999986542 234568899999999999999999999999999874321 01
Q ss_pred CHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 463 HAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 463 ~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
...+++.+|.++..+|++++|+..+.++++....
T Consensus 128 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 128 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999998754
No 117
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.82 E-value=3.5e-08 Score=82.54 Aligned_cols=85 Identities=18% Similarity=0.104 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..|+|++|+..|.+++...|.+ ..++.++|.+|..+|++++|+..+.++++++|+ +..++
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~---~~~~~ 117 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY-----SKAYGRMGLALSSLNKHVEAVAYYKKALELDPD---NETYK 117 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC-----HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCcc---chHHH
Confidence 5567889999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcH
Q 007571 468 WRRAQAYDMLALA 480 (598)
Q Consensus 468 yRRAqAy~~LGdy 480 (598)
+.+|.++..+|++
T Consensus 118 ~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 118 SNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999875
No 118
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.80 E-value=3.3e-08 Score=92.05 Aligned_cols=97 Identities=10% Similarity=-0.066 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..+++.|+|++|+..|+++++++|.+ ..++.++|.+|+.+|+|++|+..+.++++++|+ +..++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~ 159 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN-----VKALYKLGVANMYFGFLEEAKENLYKAASLNPN---NLDIR 159 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT---CHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc-----HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC---cHHHH
Confidence 5678899999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHH-HHHHHHHH
Q 007571 468 WRRAQAYDMLALAKESL-LDAILFIN 492 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl-~d~~kALe 492 (598)
..++.++..++++.++. ..|.+.+.
T Consensus 160 ~~l~~~~~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 160 NSYELCVNKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999887 44444433
No 119
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.80 E-value=5.1e-08 Score=99.68 Aligned_cols=114 Identities=13% Similarity=-0.008 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc--hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC--
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRS--KKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL-- 460 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~--~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~-- 460 (598)
...+..+...|..++..|+|.+|+..|.+|+++.+... ....+.++.|+|.+|..+|+|++|+..+.+|+++.|..
T Consensus 140 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 219 (383)
T 3ulq_A 140 IEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ 219 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 34688899999999999999999999999999976542 45568899999999999999999999999999986541
Q ss_pred -CcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 461 -NRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 461 -~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
.....+++.+|.+|..+|++++|+..|+++++......
T Consensus 220 ~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~ 258 (383)
T 3ulq_A 220 PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESN 258 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc
Confidence 01236999999999999999999999999999876543
No 120
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.79 E-value=3.5e-08 Score=90.08 Aligned_cols=110 Identities=7% Similarity=-0.150 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh---CCCC-C
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMR-SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL---HNPL-N 461 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~-~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL---dP~~-~ 461 (598)
.+..+...|..++..|+|++|+..|.+|+.+.... .....+.++.|+|.+|..+|++++|+..+.+++++ .++. .
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 104 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHH
Confidence 46678888999999999999999999999864432 23456888999999999999999999999999988 3320 0
Q ss_pred cCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 462 RHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 462 ~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
....+++.+|.++..+|++++|+..+.++++....
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 14678889999999999999999999999988665
No 121
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.78 E-value=3.8e-08 Score=100.65 Aligned_cols=109 Identities=12% Similarity=0.011 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh-----C-C
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR-SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL-----H-N 458 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~-~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL-----d-P 458 (598)
..+..+...|..+...|+|++|+..|.+|+++.|.. .....+.++.|+|.+|..+|++++|+..+.+|+++ + |
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~ 261 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILP 261 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccch
Confidence 457889999999999999999999999999987653 24556789999999999999999999999999994 5 6
Q ss_pred CCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 459 PLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 459 ~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
. .+.+++.+|.++..+|++++|+..|+++++..+..
T Consensus 262 ~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 297 (383)
T 3ulq_A 262 S---LPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKA 297 (383)
T ss_dssp G---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred h---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 6 89999999999999999999999999999987653
No 122
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.78 E-value=3.7e-08 Score=88.84 Aligned_cols=88 Identities=15% Similarity=0.003 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCH
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHA 464 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~ 464 (598)
...+..+...|..+++.|+|.+|+..|++||+++|.+ +.+|.++|.+|+.+|+|++|+.++.+|++++|+ +.
T Consensus 60 ~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~-----~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~---~~ 131 (162)
T 3rkv_A 60 RKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETN-----EKALFRRAKARIAAWKLDEAEEDLKLLLRNHPA---AA 131 (162)
T ss_dssp HTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG---GH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcc-----hHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCC---CH
Confidence 4457789999999999999999999999999999999 999999999999999999999999999999999 87
Q ss_pred -HHHHHHHHHHHHhhcH
Q 007571 465 -KSLWRRAQAYDMLALA 480 (598)
Q Consensus 465 -KAyyRRAqAy~~LGdy 480 (598)
.....++.+...++++
T Consensus 132 ~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 132 SVVAREMKIVTERRAEK 148 (162)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 4455555555554443
No 123
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.77 E-value=1.7e-08 Score=89.63 Aligned_cols=80 Identities=9% Similarity=-0.147 Sum_probs=72.9
Q ss_pred HHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHH
Q 007571 409 SKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAI 488 (598)
Q Consensus 409 e~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~ 488 (598)
..|.+++.++|.+ ...+.++|.+++..|+|++|+..+++++.++|+ ++.+++.+|.++..+|++++|+..|.
T Consensus 5 ~~l~~al~~~p~~-----~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~ 76 (142)
T 2xcb_A 5 GTLAMLRGLSEDT-----LEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY---DARYFLGLGACRQSLGLYEQALQSYS 76 (142)
T ss_dssp ----CCTTCCHHH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhHHHHHcCCHHH-----HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc---cHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4677888888877 889999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHhcc
Q 007571 489 LFINECSQ 496 (598)
Q Consensus 489 kALel~~k 496 (598)
++++..|.
T Consensus 77 ~al~~~p~ 84 (142)
T 2xcb_A 77 YGALMDIN 84 (142)
T ss_dssp HHHHHCTT
T ss_pred HHHhcCCC
Confidence 99999886
No 124
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.77 E-value=6.5e-08 Score=100.50 Aligned_cols=110 Identities=9% Similarity=-0.070 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC---
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMR----SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNP--- 459 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~----~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~--- 459 (598)
.+..+...|..++..|+|++|++.|++|+++.+.. ........|.|+|.+|..+|+|++|+..+++++++.+.
T Consensus 50 ~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~ 129 (472)
T 4g1t_A 50 KATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSS 129 (472)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccc
Confidence 35567778888888888888888888888763211 11123778888888888888888888888888877432
Q ss_pred --CCcCHHHHHHHHHHHHHhh--cHHHHHHHHHHHHHHhcc
Q 007571 460 --LNRHAKSLWRRAQAYDMLA--LAKESLLDAILFINECSQ 496 (598)
Q Consensus 460 --~~~~~KAyyRRAqAy~~LG--dy~EAl~d~~kALel~~k 496 (598)
....+.++..+|.++..+| +|++|+..|++++++.|+
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~ 170 (472)
T 4g1t_A 130 PYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPK 170 (472)
T ss_dssp SSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTT
T ss_pred ccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCC
Confidence 0115678888888777664 688888888888888765
No 125
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.76 E-value=4.6e-08 Score=82.72 Aligned_cols=84 Identities=14% Similarity=0.019 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
...+...|..++..|+|++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..+.++++++|. +..++
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~---~~~~~ 121 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF-----IKGYTRKAAALEAMKDYTKAMDVYQKALDLDSS---CKEAA 121 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG---GTHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc-----hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC---chHHH
Confidence 5668889999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhc
Q 007571 468 WRRAQAYDMLAL 479 (598)
Q Consensus 468 yRRAqAy~~LGd 479 (598)
+.++.++..+|+
T Consensus 122 ~~l~~~~~~~~~ 133 (133)
T 2lni_A 122 DGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHhcC
Confidence 999999998774
No 126
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.76 E-value=1.8e-07 Score=102.66 Aligned_cols=120 Identities=11% Similarity=-0.148 Sum_probs=100.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---chHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 007571 377 LKEDLHIKQAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR---SKKERVVLYSNRAQCHLLMQQPLAAISDATRA 453 (598)
Q Consensus 377 s~eElee~~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~---~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kA 453 (598)
+.+.+......+..+.+++..+..+|+|++|+..|.++|++...- .....+..++|+|.+|..+|+|++|+..+.++
T Consensus 298 s~e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a 377 (490)
T 3n71_A 298 SQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRM 377 (490)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 445666667788888889999999999999999999999874321 23567899999999999999999999999999
Q ss_pred HHh-----CCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 454 LCL-----HNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 454 LeL-----dP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
|++ -|+...-..++.++|.+|..+|+|++|+..|++|+++...
T Consensus 378 L~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 378 VDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 976 2330004578999999999999999999999999988764
No 127
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.74 E-value=1.7e-07 Score=93.90 Aligned_cols=109 Identities=17% Similarity=0.147 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC-
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR-SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH- 463 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~-~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~- 463 (598)
..+..+...|..++..|+|++|+..|.+++++.|.. .......++.|+|.+|..+|++++|+..+.+++.+.|. .
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~---~~ 261 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ---LK 261 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---TT
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh---Cc
Confidence 457788999999999999999999999999987653 23455779999999999999999999999999998776 4
Q ss_pred -----HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 464 -----AKSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 464 -----~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
..+++.+|.++..+|++++|+..|.++++..+..
T Consensus 262 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 300 (406)
T 3sf4_A 262 DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 300 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999987764
No 128
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.74 E-value=4.8e-08 Score=98.14 Aligned_cols=104 Identities=12% Similarity=-0.026 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc-hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC---
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRS-KKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH--- 463 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~-~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~--- 463 (598)
+..+...|..+.. |+|++|+..|.+|+++.|... ......++.|+|.+|.++|+|++|+..+++++++.|. +
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~---~~~~ 191 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKE---MENY 191 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---TTCH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH---cCCh
Confidence 4556666666666 777777777777777666532 2234566777777777777777777777777777665 3
Q ss_pred ---HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 464 ---AKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 464 ---~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
..+++.+|.++..+|++++|+..|++++ ..|.
T Consensus 192 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~ 226 (307)
T 2ifu_A 192 PTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPG 226 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTT
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCC
Confidence 2366666777777777777777777777 5443
No 129
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.74 E-value=7.9e-08 Score=98.47 Aligned_cols=110 Identities=9% Similarity=-0.057 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH-----hCCC
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR-SKKERVVLYSNRAQCHLLMQQPLAAISDATRALC-----LHNP 459 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~-~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALe-----LdP~ 459 (598)
..+..+...|..++..|+|++|+..|.+|+++.+.. .....+.++.|+|.+|..+|++++|+..+.+|++ .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 467888999999999999999999999999986432 2345688999999999999999999999999999 7787
Q ss_pred CCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 460 LNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 460 ~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
.+.+++.+|.++..+|++++|+..++++++......
T Consensus 260 ---~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 295 (378)
T 3q15_A 260 ---LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARS 295 (378)
T ss_dssp ---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTC
T ss_pred ---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999987644
No 130
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.73 E-value=5.1e-08 Score=88.08 Aligned_cols=81 Identities=11% Similarity=0.048 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|..+++.|+|++|+..|.+|++++|.+ ..+|.|+|.+|..+|+|++|+..+.++++++|+ +..+
T Consensus 44 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~ 115 (164)
T 3sz7_A 44 NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY-----SKAWSRLGLARFDMADYKGAKEAYEKGIEAEGN---GGSD 115 (164)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSS---SCCH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---chHH
Confidence 46678899999999999999999999999999999 999999999999999999999999999999999 8888
Q ss_pred HHHHHHHHH
Q 007571 467 LWRRAQAYD 475 (598)
Q Consensus 467 yyRRAqAy~ 475 (598)
+++++.+..
T Consensus 116 ~~~~~l~~~ 124 (164)
T 3sz7_A 116 AMKRGLETT 124 (164)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888776544
No 131
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.73 E-value=8.6e-08 Score=82.37 Aligned_cols=83 Identities=13% Similarity=0.019 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC------CCC
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLH------NPL 460 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLd------P~~ 460 (598)
.+..+...|..+++.|+|++|+..|+++++++|.+ ..+|.++|.+|..+|++++|+..+.++++++ |+
T Consensus 37 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~- 110 (126)
T 3upv_A 37 DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF-----VRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSS- 110 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTT-
T ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchh-
Confidence 35678899999999999999999999999999999 9999999999999999999999999999999 88
Q ss_pred CcCHHHHHHHHHHHHHh
Q 007571 461 NRHAKSLWRRAQAYDML 477 (598)
Q Consensus 461 ~~~~KAyyRRAqAy~~L 477 (598)
+..++..++.+...+
T Consensus 111 --~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 111 --AREIDQLYYKASQQR 125 (126)
T ss_dssp --HHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHHhh
Confidence 888777777776543
No 132
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.71 E-value=6.3e-08 Score=93.43 Aligned_cols=108 Identities=13% Similarity=-0.017 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPM---RSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL------ 456 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~---~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL------ 456 (598)
..+..+...|..++..|+|++|+..|.+++++... ........++.++|.+|..+|++++|+..+.+++++
T Consensus 151 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 230 (311)
T 3nf1_A 151 DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREF 230 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Confidence 45777889999999999999999999999998210 011234889999999999999999999999999985
Q ss_pred -------------------------------------------CCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHH
Q 007571 457 -------------------------------------------HNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINE 493 (598)
Q Consensus 457 -------------------------------------------dP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel 493 (598)
+|. ...+++.+|.+|..+|++++|+..|++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~la~~~~~~g~~~~A~~~~~~al~l 307 (311)
T 3nf1_A 231 GSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPT---VTTTLKNLGALYRRQGKFEAAETLEEAAMRS 307 (311)
T ss_dssp C------CCHHHHHHHHHHC-------CCSCCCC---------CHH---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCch---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 355 7789999999999999999999999999998
Q ss_pred hcc
Q 007571 494 CSQ 496 (598)
Q Consensus 494 ~~k 496 (598)
.++
T Consensus 308 ~~~ 310 (311)
T 3nf1_A 308 RKQ 310 (311)
T ss_dssp HC-
T ss_pred hhc
Confidence 764
No 133
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.71 E-value=9.3e-08 Score=82.02 Aligned_cols=73 Identities=10% Similarity=-0.009 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
..+..+...|..++..|+|++|+..|.+++++.|.+ +.++.|+|.||..+|++++|+..+.+++.++|+ ++.
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~ 96 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-----QALRVFYAMVLYNLGRYEQGVELLLKIIAETSD---DET 96 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC---CHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHH
Confidence 457789999999999999999999999999999999 999999999999999999999999999999999 765
Q ss_pred H
Q 007571 466 S 466 (598)
Q Consensus 466 A 466 (598)
.
T Consensus 97 ~ 97 (117)
T 3k9i_A 97 I 97 (117)
T ss_dssp H
T ss_pred H
Confidence 4
No 134
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.71 E-value=1.7e-07 Score=92.99 Aligned_cols=111 Identities=11% Similarity=-0.091 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc-hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC---C-CCc
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRS-KKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHN---P-LNR 462 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~-~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP---~-~~~ 462 (598)
+..+...|..++..|+|++|+..|.+|+.+.+... ......++.|+|.+|..+|+|++|+..+.+|+++-. . ...
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 45566789999999999999999999999765432 123466899999999999999999999999995311 1 011
Q ss_pred CHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 463 HAKSLWRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 463 ~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
...+|+.+|.+|..+|+|++|+..+.++++..++..
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 567999999999999999999999999999987643
No 135
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.70 E-value=3.7e-07 Score=90.47 Aligned_cols=110 Identities=10% Similarity=-0.104 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc-hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH---HhCCCC-C
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRS-KKERVVLYSNRAQCHLLMQQPLAAISDATRAL---CLHNPL-N 461 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~-~~~~a~ly~NRA~cylKLgdyeeAI~D~~kAL---eLdP~~-~ 461 (598)
.+......|..+...|+|++|+..|.+|++..+... ......+|.|+|.+|..+|+|++|+..+.+|+ +..|+. .
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~ 193 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcccc
Confidence 344456688889999999999999999998866532 22346799999999999999999999999999 445551 0
Q ss_pred cCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 462 RHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 462 ~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
....+++.+|.+|..+|+|++|+..|+++++..++
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 01279999999999999999999999999998764
No 136
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.70 E-value=1e-07 Score=91.83 Aligned_cols=112 Identities=17% Similarity=0.160 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC---
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR-SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL--- 460 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~-~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~--- 460 (598)
...+..+...|..++..|+|++|+..|.+++++.|.. .......++.++|.+|..+|++++|+..+++++.+.|..
T Consensus 180 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 259 (338)
T 3ro2_A 180 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 259 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcch
Confidence 3457788999999999999999999999999987653 234457799999999999999999999999999987761
Q ss_pred CcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 461 NRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 461 ~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.....+++.+|.++..+|++++|+..++++++..+.
T Consensus 260 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 260 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 001789999999999999999999999999999775
No 137
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.69 E-value=1.4e-07 Score=98.92 Aligned_cols=93 Identities=17% Similarity=0.079 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCH
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHA 464 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~ 464 (598)
...+..+.+.|..+++.|+|++|+..|++||+++|.+ +.+|.++|.+|..+|+|++|+.++.+|++++|+ +.
T Consensus 270 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~---~~ 341 (370)
T 1ihg_A 270 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN-----TKALYRRAQGWQGLKEYDQALADLKKAQEIAPE---DK 341 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CH
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchh-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---CH
Confidence 3457788899999999999999999999999999998 999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHhhcHHHHHH
Q 007571 465 KSLWRRAQAYDMLALAKESLL 485 (598)
Q Consensus 465 KAyyRRAqAy~~LGdy~EAl~ 485 (598)
.++..++.++..+++++++..
T Consensus 342 ~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 342 AIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988854
No 138
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.68 E-value=2.4e-07 Score=99.04 Aligned_cols=101 Identities=15% Similarity=-0.069 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..+++.|++++|+..|.++++..|.+ ...|.+++.+|.+.|++++|+..++++++++|+ +..++
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~---~~~~~ 444 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQF-----GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG---THLPY 444 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT---CSHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc---chHHH
Confidence 5567778999999999999999999999999998 889999999999999999999999999999999 89999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.+|.+|...|++++|+..|.++++..|.
T Consensus 445 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 473 (597)
T 2xpi_A 445 LFLGMQHMQLGNILLANEYLQSSYALFQY 473 (597)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999998765
No 139
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.68 E-value=5e-08 Score=80.80 Aligned_cols=68 Identities=7% Similarity=-0.082 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 427 VVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 427 a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
+..+.++|.+++.+|+|++|+..+++|++++|+ ++.+++.+|.++..+|++++|+..|.++++..|++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ---NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 678999999999999999999999999999999 99999999999999999999999999999998763
No 140
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.67 E-value=2.1e-08 Score=108.61 Aligned_cols=103 Identities=10% Similarity=0.005 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|..+++.|+|++|+..|++|++++|.+ +.++.|+|.+|..+|+|++|+..+++|++++|+ +..+
T Consensus 39 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~-----~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~---~~~~ 110 (477)
T 1wao_1 39 NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY-----IKGYYRRAASNMALGKFRAALRDYETVVKVKPH---DKDA 110 (477)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT---CTTH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHH
Confidence 36678899999999999999999999999999998 999999999999999999999999999999999 8889
Q ss_pred HHHHHHH--HHHhhcHHHHHHHHH-----------HHHHHhccC
Q 007571 467 LWRRAQA--YDMLALAKESLLDAI-----------LFINECSQS 497 (598)
Q Consensus 467 yyRRAqA--y~~LGdy~EAl~d~~-----------kALel~~k~ 497 (598)
++.++.+ +...|++++|+..+. ++++..+..
T Consensus 111 ~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 111 KMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 9999888 889999999999999 666665543
No 141
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.67 E-value=2.7e-07 Score=98.63 Aligned_cols=101 Identities=13% Similarity=-0.065 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
...+...|..+.+.|++++|++.|.++++..|.+ ..++.+++.+|.+.|++++|+..++++++++|+ ++.+|
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~---~~~~~ 478 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGT-----HLPYLFLGMQHMQLGNILLANEYLQSSYALFQY---DPLLL 478 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTC-----SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---ChHHH
Confidence 5567889999999999999999999999999988 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.+|.+|...|++++|+..|+++++..++
T Consensus 479 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 507 (597)
T 2xpi_A 479 NELGVVAFNKSDMQTAINHFQNALLLVKK 507 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999998764
No 142
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.66 E-value=1.7e-07 Score=90.37 Aligned_cols=107 Identities=16% Similarity=-0.036 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC--
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALC-----PMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLH-- 457 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~-----P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLd-- 457 (598)
...+..+...|..++..|+|++|+..|.+++.+. +.. .....++.++|.+|..+|++++|+..+.+++++.
T Consensus 66 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 66 PDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDH--PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 3457788899999999999999999999999984 221 3458899999999999999999999999999884
Q ss_pred ------CCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 458 ------NPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 458 ------P~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
|. ...+++.+|.++..+|++++|+..|+++++....
T Consensus 144 ~~~~~~~~---~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 185 (311)
T 3nf1_A 144 VLGKDHPD---VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQT 185 (311)
T ss_dssp HHCTTCHH---HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred hcCCCChH---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 44 7789999999999999999999999999998544
No 143
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.65 E-value=3.7e-07 Score=75.56 Aligned_cols=83 Identities=22% Similarity=0.141 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
...+...|..++..|+|++|+..|.+++...|.+ ..++.++|.+|..+|++++|+..+.++++++|+ +..++
T Consensus 43 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 114 (125)
T 1na0_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN---NAEAK 114 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---cHHHH
Confidence 4457788999999999999999999999999998 889999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHhh
Q 007571 468 WRRAQAYDMLA 478 (598)
Q Consensus 468 yRRAqAy~~LG 478 (598)
+.+|.++..+|
T Consensus 115 ~~l~~~~~~~g 125 (125)
T 1na0_A 115 QNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcc
Confidence 99999988765
No 144
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.65 E-value=1.2e-07 Score=79.87 Aligned_cols=85 Identities=14% Similarity=0.024 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
.+..+...|..+++.|+|++|+..|+++++++|.+ ..+|.++|.+|.++|++++|+..+++++++.|.. ....+
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~-~~~~~ 79 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDY-----VGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE-GTQKD 79 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-SCHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC-CchhH
Confidence 45678899999999999999999999999999998 8899999999999999999999999999998751 03344
Q ss_pred HHHHHHHHHHh
Q 007571 467 LWRRAQAYDML 477 (598)
Q Consensus 467 yyRRAqAy~~L 477 (598)
.......+...
T Consensus 80 ~~~l~~~l~~~ 90 (100)
T 3ma5_A 80 LSELQDAKLKA 90 (100)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 44444444433
No 145
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.65 E-value=8.7e-08 Score=96.26 Aligned_cols=113 Identities=9% Similarity=-0.055 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc-hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCC--
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRS-KKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLN-- 461 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~-~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~-- 461 (598)
...+..+.+.|+.+.+.|+|++|+..|.+|+++.+... ....+.++.|+|.+|.. |+|++|+..+++|+++.|...
T Consensus 73 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~ 151 (307)
T 2ifu_A 73 FHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERL 151 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCCh
Confidence 35788899999999999999999999999999865432 34468899999999999 999999999999999887510
Q ss_pred -cCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 462 -RHAKSLWRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 462 -~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
....++.++|.+|..+|+|++|+..|++++++.++..
T Consensus 152 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 152 RQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 0278999999999999999999999999999877644
No 146
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.65 E-value=2.4e-07 Score=84.88 Aligned_cols=85 Identities=11% Similarity=-0.093 Sum_probs=78.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC--HHHHHHHHHHHHHhhc
Q 007571 402 GNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH--AKSLWRRAQAYDMLAL 479 (598)
Q Consensus 402 GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~--~KAyyRRAqAy~~LGd 479 (598)
++...|+..|.++++.+|.+ ..++.++|.++..+|++++|+..+.++++++|+ + ..+++.+|.++..+|+
T Consensus 88 ~~~~~a~~~~~~al~~~P~~-----~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~---~~~~~a~~~l~~~~~~~g~ 159 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPDN-----FELACELAVQYNQVGRDEEALELLWNILKVNLG---AQDGEVKKTFMDILSALGQ 159 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT---TTTTHHHHHHHHHHHHHCS
T ss_pred cccchHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc---cChHHHHHHHHHHHHHhCC
Confidence 34456899999999999999 999999999999999999999999999999997 5 5699999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 007571 480 AKESLLDAILFINEC 494 (598)
Q Consensus 480 y~EAl~d~~kALel~ 494 (598)
+++|+..|+++|...
T Consensus 160 ~~~A~~~y~~al~~~ 174 (176)
T 2r5s_A 160 GNAIASKYRRQLYSI 174 (176)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 999999999998753
No 147
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.65 E-value=1e-07 Score=99.00 Aligned_cols=106 Identities=12% Similarity=-0.042 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCch-HHHHHHHHHHHHHHHH---cCChHHHHHHHHHHHHhCCCCCcC
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSK-KERVVLYSNRAQCHLL---MQQPLAAISDATRALCLHNPLNRH 463 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~-~~~a~ly~NRA~cylK---LgdyeeAI~D~~kALeLdP~~~~~ 463 (598)
...+...|..+++.|+|++|+..|.+++...|.... .....++.++|.++.. +|++++|+..+++++.++|+ +
T Consensus 372 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---~ 448 (514)
T 2gw1_A 372 PEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPR---S 448 (514)
T ss_dssp SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTT---C
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcc---c
Confidence 345778899999999999999999999999887611 0012389999999999 99999999999999999999 9
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 464 AKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 464 ~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.+++.+|.++..+|++++|+..|+++++..|+
T Consensus 449 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 481 (514)
T 2gw1_A 449 EQAKIGLAQMKLQQEDIDEAITLFEESADLART 481 (514)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999875
No 148
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.64 E-value=2.4e-07 Score=94.95 Aligned_cols=112 Identities=13% Similarity=-0.053 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc--hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC--
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRS--KKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL-- 460 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~--~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~-- 460 (598)
...+..+...|..++..|+|..|+..|.+|+++.+... ....+.++.|+|.+|..+|+|++|+..+.+|+++.+..
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~ 217 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN 217 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC
Confidence 45688899999999999999999999999999876542 34578899999999999999999999999999874320
Q ss_pred -CcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 461 -NRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 461 -~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.....+++++|.+|..+|++++|+..|.++++....
T Consensus 218 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 254 (378)
T 3q15_A 218 DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSRE 254 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 114578999999999999999999999999997654
No 149
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.64 E-value=1.5e-07 Score=95.72 Aligned_cols=111 Identities=18% Similarity=0.175 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC---C
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR-SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL---N 461 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~-~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~---~ 461 (598)
..+..+...|..++..|+|++|+..|.+++++.|.. .......++.++|.+|..+|++++|+..+++++.+.|.. .
T Consensus 221 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 300 (411)
T 4a1s_A 221 AQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGERE 300 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHH
Confidence 457788899999999999999999999999987653 234456799999999999999999999999999988751 0
Q ss_pred cCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 462 RHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 462 ~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
....+++.+|.++..+|++++|+..|+++++..+.
T Consensus 301 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 301 VEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 02689999999999999999999999999998775
No 150
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.63 E-value=2.8e-07 Score=92.22 Aligned_cols=84 Identities=14% Similarity=0.019 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHH-hCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH-HHHHHHHHHHHhhcHHH
Q 007571 405 SGAASKYSEALA-LCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK-SLWRRAQAYDMLALAKE 482 (598)
Q Consensus 405 ~eAIe~YskALe-l~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K-AyyRRAqAy~~LGdy~E 482 (598)
++|+..|.+|++ +.|.+ ..+|.++|..+.++|++++|+..++++|+++|. ++. +|...|.++...|++++
T Consensus 81 ~~A~~~~~rAl~~~~p~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~~~~~~~~~~~~~~~ 152 (308)
T 2ond_A 81 DEAANIYERAISTLLKKN-----MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI---DPTLVYIQYMKFARRAEGIKS 152 (308)
T ss_dssp HHHHHHHHHHHTTTTTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS---CTHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHhCccc-----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc---CccHHHHHHHHHHHHhcCHHH
Confidence 788888888888 57777 778888888888888888888888888888877 665 78888888888888888
Q ss_pred HHHHHHHHHHHhcc
Q 007571 483 SLLDAILFINECSQ 496 (598)
Q Consensus 483 Al~d~~kALel~~k 496 (598)
|+..|.++++..|.
T Consensus 153 A~~~~~~a~~~~p~ 166 (308)
T 2ond_A 153 GRMIFKKAREDART 166 (308)
T ss_dssp HHHHHHHHHTSTTC
T ss_pred HHHHHHHHHhcCCC
Confidence 88888888876553
No 151
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.62 E-value=3.4e-08 Score=101.71 Aligned_cols=101 Identities=10% Similarity=-0.125 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHH
Q 007571 389 LVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLW 468 (598)
Q Consensus 389 ~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyy 468 (598)
..+.+.|..+++.|+|++|+..|++||+++|.+ ..+|+|+|.+|+.+|+|++|+.++.+|++++|+ +..++.
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~---~~~a~~ 302 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKN-----PKALFRRGKAKAELGQMDSARDDFRKAQKYAPD---DKAIRR 302 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC---CHHHHH
Confidence 367889999999999999999999999999998 999999999999999999999999999999999 999999
Q ss_pred HHHHH-HHHhhcHHHHHHHHHHHHHHhccC
Q 007571 469 RRAQA-YDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 469 RRAqA-y~~LGdy~EAl~d~~kALel~~k~ 497 (598)
.++.+ ....+..+.+...|.++++..|.+
T Consensus 303 ~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~ 332 (338)
T 2if4_A 303 ELRALAEQEKALYQKQKEMYKGIFKGKDEG 332 (338)
T ss_dssp ------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCCC
Confidence 99988 445577888999999999887763
No 152
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.57 E-value=6.3e-07 Score=73.62 Aligned_cols=79 Identities=11% Similarity=-0.010 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
...+...|..++..|+|++|+..|.++++..|.+ ..++.++|.++..+|++++|+..+.++++++|+ ++.++
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 109 (118)
T 1elw_A 38 HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW-----GKGYSRKAAALEFLNRFEEAKRTYEEGLKHEAN---NPQLK 109 (118)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT---CHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc-----HHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCC---CHHHH
Confidence 4567888999999999999999999999999998 899999999999999999999999999999999 99998
Q ss_pred HHHHHHH
Q 007571 468 WRRAQAY 474 (598)
Q Consensus 468 yRRAqAy 474 (598)
..++.+.
T Consensus 110 ~~l~~~~ 116 (118)
T 1elw_A 110 EGLQNME 116 (118)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 8888764
No 153
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.57 E-value=6.7e-07 Score=89.95 Aligned_cols=100 Identities=8% Similarity=-0.158 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHH----HHcCChHHHHHHHHHHHHhCCCCCcC
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCH----LLMQQPLAAISDATRALCLHNPLNRH 463 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cy----lKLgdyeeAI~D~~kALeLdP~~~~~ 463 (598)
...+...|..+.+.|++++|+..|.++++.+|.. . ..+++.++ ...|++++|+..++++++.+|+ +
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~-----~--~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~---~ 199 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDEDA-----T--LTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSP---T 199 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----H--HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCC---C
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCc-----H--HHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCC---c
Confidence 4567788999999999999999999999999986 3 22333332 3458999999999999999999 9
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 464 AKSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 464 ~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
+.+++.+|.++..+|++++|+..|+++++..|++
T Consensus 200 ~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~ 233 (291)
T 3mkr_A 200 LLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGH 233 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999998863
No 154
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.56 E-value=5.6e-07 Score=71.85 Aligned_cols=68 Identities=15% Similarity=0.003 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 426 RVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 426 ~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.+.++.++|.+++.+|+|++|+..+.++++++|+ ++.+++.+|.++..+|++++|+..|.++++..|.
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 75 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN---NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN 75 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 3788999999999999999999999999999999 9999999999999999999999999999999765
No 155
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.54 E-value=7.8e-07 Score=96.08 Aligned_cols=118 Identities=12% Similarity=-0.146 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 007571 379 EDLHIKQAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR---SKKERVVLYSNRAQCHLLMQQPLAAISDATRALC 455 (598)
Q Consensus 379 eElee~~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~---~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALe 455 (598)
+++.+....+....+.+...-+.|+|++|+..|.++|++...- .....+..+.|+|.+|..+|+|++|+..+.++|+
T Consensus 289 e~v~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~ 368 (433)
T 3qww_A 289 EAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIK 368 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 4444444556666666776677899999999999999863221 2356789999999999999999999999999997
Q ss_pred h-----CCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 456 L-----HNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 456 L-----dP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+ -|+...-...|+++|.+|..+|+|++|+..|++|+++...
T Consensus 369 i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 369 PYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 6 2330004578999999999999999999999999998764
No 156
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.54 E-value=6.9e-07 Score=76.82 Aligned_cols=67 Identities=15% Similarity=0.022 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 427 VVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 427 a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+..+.++|.++++.|+|++|+..+.+++.++|+ ++.+++.+|.++..+|++++|+..|.++++..|.
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 75 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL---VAVYYTNRALCYLKMQQPEQALADCRRALELDGQ 75 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC---cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch
Confidence 889999999999999999999999999999999 9999999999999999999999999999999775
No 157
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.54 E-value=3.6e-07 Score=91.20 Aligned_cols=105 Identities=19% Similarity=0.066 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCC--c--
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLN--R-- 462 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~--~-- 462 (598)
.+..+...|..+++.|+|++|+..|++|++++|.+ ..++.++|.+|..+|+|++|+..++++++++|+.. .
T Consensus 37 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~ 111 (281)
T 2c2l_A 37 VAVYYTNRALCYLKMQQPEQALADCRRALELDGQS-----VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGD 111 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHH
Confidence 45678899999999999999999999999999999 99999999999999999999999999999998620 0
Q ss_pred CHHHHHHHHH----------------------HHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 463 HAKSLWRRAQ----------------------AYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 463 ~~KAyyRRAq----------------------Ay~~LGdy~EAl~d~~kALel~~k 496 (598)
.....+++++ ..+..|++++|+..++++++..|.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~~~p~ 167 (281)
T 2c2l_A 112 DIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHED 167 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 1122222221 112467888998888888887654
No 158
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.53 E-value=8e-07 Score=75.37 Aligned_cols=86 Identities=13% Similarity=-0.003 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
+..+...|..++..|+|++|+..|.++++++|.. ..++.++|.+|..+|++++|+..+.++++++|.. ....+.
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~ 92 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY-----SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSR-GDQQVV 92 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH-TCHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccc-ccHHHH
Confidence 4568889999999999999999999999999998 8999999999999999999999999999998851 034444
Q ss_pred HHHHHHHHHhhc
Q 007571 468 WRRAQAYDMLAL 479 (598)
Q Consensus 468 yRRAqAy~~LGd 479 (598)
......+..+++
T Consensus 93 ~~l~~~l~~l~~ 104 (115)
T 2kat_A 93 KELQVFLRRLAR 104 (115)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc
Confidence 444555544443
No 159
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.53 E-value=1.2e-06 Score=84.91 Aligned_cols=98 Identities=15% Similarity=-0.074 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHh
Q 007571 385 QAAALVVKLEGNSLFS----AGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLL----MQQPLAAISDATRALCL 456 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk----~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylK----LgdyeeAI~D~~kALeL 456 (598)
...+..+...|..++. .+++++|+..|.+|++.. + +.++.++|.+|.. .+++++|+..+++|+++
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~-----~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~ 107 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--Y-----SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL 107 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C-----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--C-----HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc
Confidence 3456778888999999 999999999999999875 4 7889999999999 99999999999999887
Q ss_pred CCCCCcCHHHHHHHHHHHHH----hhcHHHHHHHHHHHHHHh
Q 007571 457 HNPLNRHAKSLWRRAQAYDM----LALAKESLLDAILFINEC 494 (598)
Q Consensus 457 dP~~~~~~KAyyRRAqAy~~----LGdy~EAl~d~~kALel~ 494 (598)
+ ++.+++.+|.+|.. .+++++|+..|+++++..
T Consensus 108 --~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 108 --K---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN 144 (273)
T ss_dssp --T---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT
T ss_pred --C---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC
Confidence 4 67899999999999 999999999999999864
No 160
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.52 E-value=1.1e-06 Score=80.14 Aligned_cols=112 Identities=13% Similarity=-0.027 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC--
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALAL---CPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL-- 460 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel---~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~-- 460 (598)
..+..+...|..++..|+|++|+..|.+|+.+ .+++ ......++.|+|.+|..+|++++|+..+.+++.+.+..
T Consensus 64 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 142 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED-PLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADD 142 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC-HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccc
Confidence 45778899999999999999999999999998 3322 22568889999999999999999999999999774321
Q ss_pred -CcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 461 -NRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 461 -~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
.....++..+|.++..+|++++|+..+.+++++.....
T Consensus 143 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 181 (203)
T 3gw4_A 143 QVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELE 181 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC
Confidence 01245678999999999999999999999999987633
No 161
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.51 E-value=3.8e-07 Score=91.11 Aligned_cols=96 Identities=8% Similarity=-0.081 Sum_probs=84.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC--HHHHH
Q 007571 391 VKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH--AKSLW 468 (598)
Q Consensus 391 lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~--~KAyy 468 (598)
....+..+...+++..|+..|.+++...|++ ..++.|+|.+|..+|++++|+..+.++++++|+ + ..++.
T Consensus 188 ~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~-----~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~---~~~~~a~~ 259 (287)
T 3qou_A 188 GLVAQIELLXQAADTPEIQQLQQQVAENPED-----AALATQLALQLHQVGRNEEALELLFGHLRXDLT---AADGQTRX 259 (287)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---GGGGHHHH
T ss_pred HHHHHHHHHhhcccCccHHHHHHHHhcCCcc-----HHHHHHHHHHHHHcccHHHHHHHHHHHHhcccc---cccchHHH
Confidence 3344455566666677777888888888888 999999999999999999999999999999999 7 89999
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHHHh
Q 007571 469 RRAQAYDMLALAKESLLDAILFINEC 494 (598)
Q Consensus 469 RRAqAy~~LGdy~EAl~d~~kALel~ 494 (598)
+++.++..+|+.++|+..|++++...
T Consensus 260 ~l~~~~~~~g~~~~a~~~~r~al~~~ 285 (287)
T 3qou_A 260 TFQEILAALGTGDALASXYRRQLYAL 285 (287)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHh
Confidence 99999999999999999999998753
No 162
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.51 E-value=7.7e-07 Score=89.03 Aligned_cols=96 Identities=10% Similarity=-0.069 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCCCcCHHHHH
Q 007571 390 VVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLL-MQQPLAAISDATRALCLHNPLNRHAKSLW 468 (598)
Q Consensus 390 ~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylK-LgdyeeAI~D~~kALeLdP~~~~~~KAyy 468 (598)
.+...|+.+.+.|++++|+..|.+|++..|.. ..+|...+..... +|++++|+..++++++++|+ ++.++.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~-----~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~ 207 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDARTR-----HHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGD---IPEYVL 207 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC-----THHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTT---CHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHHHHH
Confidence 45555555555555666666666665555544 4444444433222 45566666666666666665 555666
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHHH
Q 007571 469 RRAQAYDMLALAKESLLDAILFINE 493 (598)
Q Consensus 469 RRAqAy~~LGdy~EAl~d~~kALel 493 (598)
.+|..+..+|++++|+..|+++++.
T Consensus 208 ~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 208 AYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 6666665566666666666666554
No 163
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.51 E-value=3.8e-07 Score=94.71 Aligned_cols=102 Identities=11% Similarity=-0.066 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHc-------------------CChHHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLM-------------------QQPLAAI 447 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKL-------------------gdyeeAI 447 (598)
....+...|..+...|++.+|+..|.+|++..|.+ +.++.|+|.||... +.++.|+
T Consensus 246 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 320 (472)
T 4g1t_A 246 VTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNN-----AYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAV 320 (472)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCh-----HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHH
Confidence 34567789999999999999999999999999998 88888888887643 3467888
Q ss_pred HHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 448 SDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 448 ~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
..+.++++++|. +..+++.+|.++..+|++++|+..|+++++..++
T Consensus 321 ~~~~~a~~~~~~---~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~ 366 (472)
T 4g1t_A 321 AHLKKADEANDN---LFRVCSILASLHALADQYEEAEYYFQKEFSKELT 366 (472)
T ss_dssp HHHHHHHHHCTT---TCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHhhcCCc---hhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 888888888888 8888888888888888888888888888876543
No 164
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.50 E-value=1.3e-06 Score=76.29 Aligned_cols=66 Identities=3% Similarity=-0.226 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 428 VLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 428 ~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
..+.++|.+++..|++++|+..++++++++|+ ++.+++.+|.++..+|++++|+..|++++++.|+
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE---REEAWRSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34788999999999999999999999999999 9999999999999999999999999999999876
No 165
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.49 E-value=2.7e-07 Score=87.30 Aligned_cols=68 Identities=13% Similarity=0.036 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCchHHHHHHH----HHHHHHHHHcCChHHHHHHHHHHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALAL-------CPMRSKKERVVLY----SNRAQCHLLMQQPLAAISDATRALC 455 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel-------~P~~~~~~~a~ly----~NRA~cylKLgdyeeAI~D~~kALe 455 (598)
.+..+.+.|..+.+.|+|++|+..|++||++ +|++ +.+| +|+|.++..+|+|++|+.+|++||+
T Consensus 56 ~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~-----~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 56 DAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDE-----GKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTH-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCch-----HHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHh
Confidence 4568999999999999999999999999999 9988 8888 9999999999999999999999999
Q ss_pred hCCC
Q 007571 456 LHNP 459 (598)
Q Consensus 456 LdP~ 459 (598)
++|+
T Consensus 131 l~p~ 134 (159)
T 2hr2_A 131 MIEE 134 (159)
T ss_dssp HHHH
T ss_pred cCCC
Confidence 9997
No 166
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.49 E-value=7.9e-07 Score=76.32 Aligned_cols=81 Identities=12% Similarity=-0.019 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMR--SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK 465 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~--~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K 465 (598)
+....+.|+.+|+.|+|..|+..|.+|++..+.. .......++.++|.||+++|+++.|+..+.+|++++|+ +..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~---~~~ 81 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE---HQR 81 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC---CHH
Confidence 4557889999999999999999999999975322 12345899999999999999999999999999999999 888
Q ss_pred HHHHHH
Q 007571 466 SLWRRA 471 (598)
Q Consensus 466 AyyRRA 471 (598)
++.+++
T Consensus 82 ~~~n~~ 87 (104)
T 2v5f_A 82 ANGNLK 87 (104)
T ss_dssp HHHHHH
T ss_pred HHhhHH
Confidence 877766
No 167
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.49 E-value=1.8e-07 Score=76.42 Aligned_cols=71 Identities=14% Similarity=-0.019 Sum_probs=66.6
Q ss_pred CCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 418 CPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 418 ~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+|.+ +.++.++|.+++.+|++++|+..++++++++|. +..+++.+|.++..+|++++|+..|+++++..+.
T Consensus 2 ~p~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 2 VDQN-----PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE---ESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCSS-----TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCc-----HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 4665 778899999999999999999999999999999 9999999999999999999999999999998765
No 168
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.48 E-value=9.1e-07 Score=76.27 Aligned_cols=80 Identities=14% Similarity=0.019 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
....+...|..++..|+|++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..+.++++++|+ +..+
T Consensus 64 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~~ 135 (148)
T 2dba_A 64 QAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD-----VKALYRRSQALEKLGRLDQAVLDLQRCVSLEPK---NKVF 135 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSS---CHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---cHHH
Confidence 36778899999999999999999999999999998 899999999999999999999999999999999 8888
Q ss_pred HHHHHHHH
Q 007571 467 LWRRAQAY 474 (598)
Q Consensus 467 yyRRAqAy 474 (598)
+..++.+.
T Consensus 136 ~~~l~~~~ 143 (148)
T 2dba_A 136 QEALRNIS 143 (148)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776654
No 169
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.45 E-value=1.5e-06 Score=96.66 Aligned_cols=105 Identities=11% Similarity=-0.032 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcC--ChHHHHHHHHH
Q 007571 385 QAAALVVKLEGNSLFSAGN----------ISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQ--QPLAAISDATR 452 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~Gd----------Y~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLg--dyeeAI~D~~k 452 (598)
.+....+..+|..+.+.|+ |++|+..|+++|+.+|.+ ..+|.+|+-++.+++ +|++|+..|++
T Consensus 60 P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~-----y~aW~hR~w~l~~l~~~~~~~el~~~~k 134 (567)
T 1dce_A 60 PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS-----YGTWHHRCWLLSRLPEPNWARELELCAR 134 (567)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHTCSSCCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcccccHHHHHHHHHH
Confidence 4456778888988888888 999999999999999999 999999999999999 77999999999
Q ss_pred HHHhCCCCCcCHHHHHHHHHHHHHhh-cHHHHHHHHHHHHHHhccC
Q 007571 453 ALCLHNPLNRHAKSLWRRAQAYDMLA-LAKESLLDAILFINECSQS 497 (598)
Q Consensus 453 ALeLdP~~~~~~KAyyRRAqAy~~LG-dy~EAl~d~~kALel~~k~ 497 (598)
+|++||. +..||..|+.++..+| .++++++++.++|+..+.+
T Consensus 135 ~l~~d~~---N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n 177 (567)
T 1dce_A 135 FLEADER---NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 177 (567)
T ss_dssp HHHHCTT---CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCC
T ss_pred HHhhccc---cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCC
Confidence 9999999 9999999999999999 9999999999999987763
No 170
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.44 E-value=1.4e-06 Score=71.50 Aligned_cols=64 Identities=11% Similarity=-0.038 Sum_probs=61.3
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHH-HHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 430 YSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAK-SLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 430 y~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~K-AyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
..++|.++++.|+|++|+..++++++++|+ ++. +++.+|.+|..+|++++|+..|+++++..|+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 67 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV---GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPD 67 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS---THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC---cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 367999999999999999999999999999 999 9999999999999999999999999999876
No 171
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.43 E-value=2.7e-07 Score=87.27 Aligned_cols=69 Identities=16% Similarity=0.005 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcC-----------ChH
Q 007571 386 AAALVVKLEGNSLFSAGNI----------SGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQ-----------QPL 444 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY----------~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLg-----------dye 444 (598)
..+..+...|+.+...++| ++||..|.+||+++|+. ..+|+|+|.+|..+| +|+
T Consensus 34 ~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~-----~~A~~~LG~ay~~lg~l~P~~~~a~g~~~ 108 (158)
T 1zu2_A 34 LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK-----DEAVWCIGNAYTSFAFLTPDETEAKHNFD 108 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc-----HHHHHHHHHHHHHhcccCcchhhhhccHH
Confidence 3577788888888888765 59999999999999999 999999999999985 899
Q ss_pred HHHHHHHHHHHhCCC
Q 007571 445 AAISDATRALCLHNP 459 (598)
Q Consensus 445 eAI~D~~kALeLdP~ 459 (598)
+|+..|.+||+++|+
T Consensus 109 eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 109 LATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999999999
No 172
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.41 E-value=3.8e-06 Score=71.35 Aligned_cols=81 Identities=7% Similarity=0.005 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
...+...|..+++.|+|++|+..|.+++...|.+ ...+.++.++|.+|.++|++++|+..+++++...|+ +..+.
T Consensus 39 ~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~---~~~~~ 113 (129)
T 2xev_A 39 PNALYWLGESYYATRNFQLAEAQFRDLVSRYPTH--DKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPG---SDAAR 113 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS--TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---SHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC--cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC---ChHHH
Confidence 3567889999999999999999999999999986 234678999999999999999999999999999999 77665
Q ss_pred HHHHHH
Q 007571 468 WRRAQA 473 (598)
Q Consensus 468 yRRAqA 473 (598)
.-+...
T Consensus 114 ~a~~~l 119 (129)
T 2xev_A 114 VAQERL 119 (129)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544433
No 173
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.41 E-value=3.1e-06 Score=91.04 Aligned_cols=111 Identities=5% Similarity=-0.086 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh-----C
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR---SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL-----H 457 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~---~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL-----d 457 (598)
..+..+...-..+.++|+|++|+..|.+++++...- .....+..+.|+|.+|..+|+|++|+..+.++|.+ -
T Consensus 285 ~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg 364 (429)
T 3qwp_A 285 KEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFP 364 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcC
Confidence 345566667777889999999999999999864221 23567899999999999999999999999999975 2
Q ss_pred CCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 458 NPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 458 P~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
|+...-...|+++|.+|..+|++++|+..|++|+++...
T Consensus 365 ~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 365 GSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 330004578999999999999999999999999998764
No 174
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.40 E-value=2e-06 Score=95.51 Aligned_cols=105 Identities=12% Similarity=0.019 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCC----------hHHHHHHHHHH
Q 007571 385 QAAALVVKLEGNSLFSAGNI-SGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQ----------PLAAISDATRA 453 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY-~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgd----------yeeAI~D~~kA 453 (598)
++....+........+.|+| ++|++.|+++|.++|.+ ..+|++|+.++.++++ +++++..++++
T Consensus 25 ~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~-----~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~ 99 (567)
T 1dce_A 25 LKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDF-----ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESC 99 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchh-----HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHH
Confidence 33444445555556667766 67899999999999999 9999999999999998 99999999999
Q ss_pred HHhCCCCCcCHHHHHHHHHHHHHhh--cHHHHHHHHHHHHHHhccC
Q 007571 454 LCLHNPLNRHAKSLWRRAQAYDMLA--LAKESLLDAILFINECSQS 497 (598)
Q Consensus 454 LeLdP~~~~~~KAyyRRAqAy~~LG--dy~EAl~d~~kALel~~k~ 497 (598)
|+.+|+ +..+|+.|+.++..++ ++++|+..+.++++..+++
T Consensus 100 l~~~pK---~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N 142 (567)
T 1dce_A 100 LRVNPK---SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN 142 (567)
T ss_dssp HHHCTT---CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred HHhCCC---CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcccc
Confidence 999999 9999999999999999 7799999999999998764
No 175
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.39 E-value=4.2e-06 Score=80.95 Aligned_cols=96 Identities=19% Similarity=0.014 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhC
Q 007571 386 AAALVVKLEGNSLFS----AGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLL----MQQPLAAISDATRALCLH 457 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk----~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylK----LgdyeeAI~D~~kALeLd 457 (598)
..+..+...|..++. .+++++|+..|++|++.. + +.++.|+|.+|.. .+++++|+..+++|++++
T Consensus 72 ~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~-----~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 72 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--Y-----AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN 144 (273)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C-----HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--C-----ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC
Confidence 356778889999999 999999999999999974 4 7899999999999 999999999999999975
Q ss_pred CCCCcCHHHHHHHHHHHHH----hhcHHHHHHHHHHHHHH
Q 007571 458 NPLNRHAKSLWRRAQAYDM----LALAKESLLDAILFINE 493 (598)
Q Consensus 458 P~~~~~~KAyyRRAqAy~~----LGdy~EAl~d~~kALel 493 (598)
++.+++.+|.+|.. .+++++|+..|+++++.
T Consensus 145 -----~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 145 -----DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp -----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred -----cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 45899999999999 99999999999999987
No 176
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.37 E-value=2.5e-06 Score=88.12 Aligned_cols=108 Identities=12% Similarity=-0.041 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHH----HHc---CChHHHHHHHH
Q 007571 381 LHIKQAAALVVKLEGNSLFSAG--NISGAASKYSEALALCPMRSKKERVVLYSNRAQCH----LLM---QQPLAAISDAT 451 (598)
Q Consensus 381 lee~~~~A~~lKeeGN~lfk~G--dY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cy----lKL---gdyeeAI~D~~ 451 (598)
+....+....+..+|..+...| ++++|+..++++|..+|.+ ..++++|+.++ .++ +++++++..++
T Consensus 60 L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~-----y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~ 134 (306)
T 3dra_A 60 INELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKN-----YQIWNYRQLIIGQIMELNNNDFDPYREFDILE 134 (306)
T ss_dssp HHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTC-----CHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHH
T ss_pred HHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCccc-----HHHHHHHHHHHHHHHHhccccCCHHHHHHHHH
Confidence 3344456778899999999999 9999999999999999999 99999999999 777 89999999999
Q ss_pred HHHHhCCCCCcCHHHHHHHHHHHHHhhcHH--HHHHHHHHHHHHhcc
Q 007571 452 RALCLHNPLNRHAKSLWRRAQAYDMLALAK--ESLLDAILFINECSQ 496 (598)
Q Consensus 452 kALeLdP~~~~~~KAyyRRAqAy~~LGdy~--EAl~d~~kALel~~k 496 (598)
++|+.+|. +..+++.|+.++..+|.++ +++..+.++++..+.
T Consensus 135 ~~l~~~pk---ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~ 178 (306)
T 3dra_A 135 AMLSSDPK---NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLK 178 (306)
T ss_dssp HHHHHCTT---CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTT
T ss_pred HHHHhCCC---CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCC
Confidence 99999999 9999999999999999999 999999999998775
No 177
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.33 E-value=9.5e-06 Score=81.94 Aligned_cols=110 Identities=12% Similarity=-0.034 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCC---cC
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLN---RH 463 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~---~~ 463 (598)
.+......|..++..|++++|+..+.+++...|.........++.++|.+|...|++++|+..+.+++.+.|... ..
T Consensus 13 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 92 (373)
T 1hz4_A 13 HAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYA 92 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 456677889999999999999999999999988764455677899999999999999999999999999876510 01
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 464 AKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 464 ~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
..+++.+|.++...|++++|+..|.++++..+.
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~ 125 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINE 125 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 345788999999999999999999999998865
No 178
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.31 E-value=2.9e-06 Score=89.50 Aligned_cols=109 Identities=10% Similarity=-0.015 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHc-C-ChHHHHHHHHHHHHhC
Q 007571 381 LHIKQAAALVVKLEGNSLFSAG-NISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLM-Q-QPLAAISDATRALCLH 457 (598)
Q Consensus 381 lee~~~~A~~lKeeGN~lfk~G-dY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKL-g-dyeeAI~D~~kALeLd 457 (598)
+....+....+..+|..+...| .+++++..++++|..+|.+ ..+|++|+.++..+ + ++++++..++++|+++
T Consensus 81 L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKn-----y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~d 155 (349)
T 3q7a_A 81 VRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKS-----YQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPD 155 (349)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCC-----HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSC
T ss_pred HHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhC
Confidence 3334455677888999999999 5999999999999999999 99999999999998 8 9999999999999999
Q ss_pred CCCCcCHHHHHHHHHHHHHhhcHH--------HHHHHHHHHHHHhccC
Q 007571 458 NPLNRHAKSLWRRAQAYDMLALAK--------ESLLDAILFINECSQS 497 (598)
Q Consensus 458 P~~~~~~KAyyRRAqAy~~LGdy~--------EAl~d~~kALel~~k~ 497 (598)
|. |..|++.|+.++..+|.++ +++..+.++++..+.+
T Consensus 156 pk---Ny~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N 200 (349)
T 3q7a_A 156 PK---NYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRN 200 (349)
T ss_dssp TT---CHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred CC---CHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCC
Confidence 99 9999999999999999998 9999999999998764
No 179
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.31 E-value=6.9e-06 Score=82.96 Aligned_cols=104 Identities=14% Similarity=-0.000 Sum_probs=49.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCch---HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCC--cCHH
Q 007571 391 VKLEGNSLFSAGNISGAASKYSEALALCPMRSK---KERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLN--RHAK 465 (598)
Q Consensus 391 lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~---~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~--~~~K 465 (598)
+...|..++..|+|.+|+..|.+++.+.+.... .....++.|+|.+|..+|++++|+..+.+++.+.|... ....
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 175 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQ 175 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHH
Confidence 334455555555555555555555555432100 12334445555555555555555555555555544310 0234
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHh
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINEC 494 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~ 494 (598)
+++.+|.++...|++++|...+.+++...
T Consensus 176 ~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 176 CLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 45555555555555555555555555543
No 180
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.29 E-value=6.4e-06 Score=68.77 Aligned_cols=69 Identities=9% Similarity=-0.099 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccC
Q 007571 426 RVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQS 497 (598)
Q Consensus 426 ~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~ 497 (598)
.+..+.++|.+++..|+|++|+..+.+++.++|. ++.+++.+|.++..+|++++|+..|.++++..+..
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT---NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc---cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 3678999999999999999999999999999999 99999999999999999999999999999998763
No 181
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.21 E-value=6e-06 Score=85.27 Aligned_cols=103 Identities=11% Similarity=-0.094 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHH----HHc---CCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChH--HHHHHHHHHHHhC
Q 007571 387 AALVVKLEGNSL----FSA---GNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPL--AAISDATRALCLH 457 (598)
Q Consensus 387 ~A~~lKeeGN~l----fk~---GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdye--eAI~D~~kALeLd 457 (598)
....+..+|..+ .+. +++.+++..++++++.+|.+ ..++++|+.+..+++.++ +++..++++|+.+
T Consensus 102 ~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkn-----y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d 176 (306)
T 3dra_A 102 NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKN-----HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTD 176 (306)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHhcccChHHHHHHHHHHHHhC
Confidence 344566666666 555 78999999999999999999 999999999999999999 9999999999999
Q ss_pred CCCCcCHHHHHHHHHHHHHhhc------HHHHHHHHHHHHHHhccC
Q 007571 458 NPLNRHAKSLWRRAQAYDMLAL------AKESLLDAILFINECSQS 497 (598)
Q Consensus 458 P~~~~~~KAyyRRAqAy~~LGd------y~EAl~d~~kALel~~k~ 497 (598)
|. |..|+..|+.++..++. +++++..+.++|...|.+
T Consensus 177 ~~---N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n 219 (306)
T 3dra_A 177 LK---NNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQN 219 (306)
T ss_dssp TT---CHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSC
T ss_pred CC---CHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCC
Confidence 99 99999999999999998 999999999999998863
No 182
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.19 E-value=1.4e-05 Score=83.72 Aligned_cols=107 Identities=8% Similarity=-0.106 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHhCCCC
Q 007571 384 KQAAALVVKLEGNSLFSAG--NISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQ-PLAAISDATRALCLHNPL 460 (598)
Q Consensus 384 ~~~~A~~lKeeGN~lfk~G--dY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgd-yeeAI~D~~kALeLdP~~ 460 (598)
..+....+..++..+.+.+ .|.+++..++++++.+|.+ ..+|++|+.+...++. +++++..++++|+.+|.
T Consensus 104 ~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprN-----y~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~- 177 (331)
T 3dss_A 104 NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN-----FHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS- 177 (331)
T ss_dssp CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSC-
T ss_pred CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCC-
Confidence 3456777888999998888 4999999999999999999 9999999999999999 69999999999999999
Q ss_pred CcCHHHHHHHHHHHHHh--------------hcHHHHHHHHHHHHHHhccCC
Q 007571 461 NRHAKSLWRRAQAYDML--------------ALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 461 ~~~~KAyyRRAqAy~~L--------------Gdy~EAl~d~~kALel~~k~~ 498 (598)
|..|+..|+.++..+ +.+++++..+.+++...|++.
T Consensus 178 --N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 178 --NYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp --CHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred --CHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 999999999999998 779999999999999998744
No 183
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.17 E-value=1.3e-05 Score=86.04 Aligned_cols=102 Identities=14% Similarity=0.016 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-hCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 007571 387 AALVVKLEGNSLFS-------AGNIS-------GAASKYSEALA-LCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDAT 451 (598)
Q Consensus 387 ~A~~lKeeGN~lfk-------~GdY~-------eAIe~YskALe-l~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~ 451 (598)
.+..+...|..+.+ .|+++ +|+..|.+|++ ++|.+ ..+|.++|..+.++|++++|+..++
T Consensus 271 ~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~-----~~l~~~~~~~~~~~g~~~~A~~~~~ 345 (530)
T 2ooe_A 271 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKN-----MLLYFAYADYEESRMKYEKVHSIYN 345 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSC-----HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCccc-----HHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 34556667776665 68876 89999999997 78988 8899999999999999999999999
Q ss_pred HHHHhCCCCCcCH-HHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 452 RALCLHNPLNRHA-KSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 452 kALeLdP~~~~~~-KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
++++++|. ++ .+|...|..+...|++++|+..|.++++..+.
T Consensus 346 ~al~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 346 RLLAIEDI---DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HHHHSSSS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred HHhCcccc---CchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 99999888 74 68999999999999999999999999887543
No 184
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.16 E-value=1.3e-05 Score=76.24 Aligned_cols=92 Identities=12% Similarity=-0.112 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcC----ChHHHHHHHHHHHHhCCCCCcCH
Q 007571 389 LVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQ----QPLAAISDATRALCLHNPLNRHA 464 (598)
Q Consensus 389 ~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLg----dyeeAI~D~~kALeLdP~~~~~~ 464 (598)
..+...|..++..+++++|+..|++|++.. + +.++.|+|.+|.. + ++++|+..+.+|++ ++ ++
T Consensus 19 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g--~-----~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g---~~ 85 (212)
T 3rjv_A 19 RAQYYLADTWVSSGDYQKAEYWAQKAAAQG--D-----GDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG---SK 85 (212)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTT--C-----HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT---CH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHcC--C-----HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC---CH
Confidence 334444555555555555555555554431 2 3444444444444 3 44555555544422 23 44
Q ss_pred HHHHHHHHHHHH----hhcHHHHHHHHHHHHHH
Q 007571 465 KSLWRRAQAYDM----LALAKESLLDAILFINE 493 (598)
Q Consensus 465 KAyyRRAqAy~~----LGdy~EAl~d~~kALel 493 (598)
.+++.+|.+|.. .+++++|+..|+++++.
T Consensus 86 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 118 (212)
T 3rjv_A 86 SGEIVLARVLVNRQAGATDVAHAITLLQDAARD 118 (212)
T ss_dssp HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc
Confidence 444444444444 44444454444444443
No 185
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.12 E-value=1.3e-05 Score=76.28 Aligned_cols=100 Identities=9% Similarity=-0.106 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCC
Q 007571 388 ALVVKLEGNSLFS----AGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLL----MQQPLAAISDATRALCLHNP 459 (598)
Q Consensus 388 A~~lKeeGN~lfk----~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylK----LgdyeeAI~D~~kALeLdP~ 459 (598)
+......|..++. .+++.+|+..|.+|++..|.+ ..+.++.|+|.+|.. .+++++|+..+++|+++ |+
T Consensus 85 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~---~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~ 160 (212)
T 3rjv_A 85 KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESD---AAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SR 160 (212)
T ss_dssp HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSH---HHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SC
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCc---chHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CC
Confidence 5567788888887 899999999999999988731 127899999999999 89999999999999999 66
Q ss_pred CCcCHHHHHHHHHHHHHh-h-----cHHHHHHHHHHHHHHh
Q 007571 460 LNRHAKSLWRRAQAYDML-A-----LAKESLLDAILFINEC 494 (598)
Q Consensus 460 ~~~~~KAyyRRAqAy~~L-G-----dy~EAl~d~~kALel~ 494 (598)
++.+++.+|.+|..- | ++++|+..|+++++.-
T Consensus 161 ---~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g 198 (212)
T 3rjv_A 161 ---TGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG 198 (212)
T ss_dssp ---TTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT
T ss_pred ---CHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 778999999999875 3 8999999999999874
No 186
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.10 E-value=2.4e-05 Score=85.75 Aligned_cols=111 Identities=5% Similarity=-0.127 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----CCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh----
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALC----PMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL---- 456 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~----P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL---- 456 (598)
...+..+.+.|..+..+|+|++|+..|.++|++. +.+ ....+..++|+|.+|..+|+|++|+..+.+|+++
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN-NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 4578889999999999999999999999999863 222 3567999999999999999999999999999975
Q ss_pred -CCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 457 -HNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 457 -dP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
-|+.....+.+-.+++++..++.|++|...|.++.+...+
T Consensus 427 lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~ 467 (490)
T 3n71_A 427 HGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALN 467 (490)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4550003466678899999999999999999999887655
No 187
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.08 E-value=4.2e-05 Score=65.13 Aligned_cols=71 Identities=11% Similarity=0.013 Sum_probs=65.4
Q ss_pred CCCCchHHHHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHh
Q 007571 418 CPMRSKKERVVLYSNRAQCHLLMQQ---PLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINEC 494 (598)
Q Consensus 418 ~P~~~~~~~a~ly~NRA~cylKLgd---yeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~ 494 (598)
+|.+ +.++..+|.+++..++ ..+|...+.+||++||+ ++++++-+|.+++..|+|++|+..++++++..
T Consensus 2 ~p~~-----~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~---~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 2 NAVT-----ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY---NEAALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp CCCC-----HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred CCCC-----HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 4666 8899999999987766 79999999999999999 99999999999999999999999999999987
Q ss_pred cc
Q 007571 495 SQ 496 (598)
Q Consensus 495 ~k 496 (598)
|.
T Consensus 74 p~ 75 (93)
T 3bee_A 74 DP 75 (93)
T ss_dssp CT
T ss_pred CC
Confidence 76
No 188
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.07 E-value=3e-05 Score=81.08 Aligned_cols=99 Identities=13% Similarity=0.042 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHcCCHH-HHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCC----------hHHHHHHHHHHHHhCC
Q 007571 390 VVKLEGNSLFSAGNIS-GAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQ----------PLAAISDATRALCLHN 458 (598)
Q Consensus 390 ~lKeeGN~lfk~GdY~-eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgd----------yeeAI~D~~kALeLdP 458 (598)
.+.+.-...-+.|+|. +|+..++++|.++|.+ .++++.|+.+...++. +++++..++.+|..+|
T Consensus 31 ~~~~~~~~~~~~~e~s~eaL~~t~~~L~~nP~~-----ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~P 105 (331)
T 3dss_A 31 SATQAVFQKRQAGELDESVLELTSQILGANPDF-----ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNP 105 (331)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHTTCTTC-----HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchh-----HHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCC
Confidence 3333344444667765 6788888888888887 7777777777766665 5677777777777777
Q ss_pred CCCcCHHHHHHHHHHHHHhhc--HHHHHHHHHHHHHHhcc
Q 007571 459 PLNRHAKSLWRRAQAYDMLAL--AKESLLDAILFINECSQ 496 (598)
Q Consensus 459 ~~~~~~KAyyRRAqAy~~LGd--y~EAl~d~~kALel~~k 496 (598)
. +..+++.|+.++..+++ +++++..+.++++..|+
T Consensus 106 K---ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr 142 (331)
T 3dss_A 106 K---SYGTWHHRCWLLSRLPEPNWARELELCARFLEADER 142 (331)
T ss_dssp T---CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT
T ss_pred C---CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC
Confidence 7 77777777777777773 67777777777776554
No 189
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.06 E-value=2e-05 Score=80.79 Aligned_cols=102 Identities=9% Similarity=-0.143 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC--CCCCcCHHHH
Q 007571 390 VVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLH--NPLNRHAKSL 467 (598)
Q Consensus 390 ~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLd--P~~~~~~KAy 467 (598)
.....|..+++.++|.+|+..|++++...+. .....+++++|.++..+|++++|+..+++|+.-. |.. .+.+.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~---~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~--~~da~ 211 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDK---FLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEAC--ARAIA 211 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTT--HHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCc---ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccc--cHHHH
Confidence 7788999999999999999999988765311 1235689999999999999999999999999654 432 56799
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+++|.++..+|+.++|...|++++...|.
T Consensus 212 ~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 212 WYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999664
No 190
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.98 E-value=5.4e-05 Score=71.08 Aligned_cols=85 Identities=12% Similarity=-0.031 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHhC-C-CCCcCHHHHHHHHHHHHHhh
Q 007571 404 ISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQ---QPLAAISDATRALCLH-N-PLNRHAKSLWRRAQAYDMLA 478 (598)
Q Consensus 404 Y~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLg---dyeeAI~D~~kALeLd-P-~~~~~~KAyyRRAqAy~~LG 478 (598)
...+.+.|.+++...|.+ ..+.+|.|.|+.+.+ +++++|..++.+++.+ | . +..++|.+|.+++.+|
T Consensus 14 l~~~~~~y~~e~~~~~~~-----~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~---~rd~lY~LAv~~~kl~ 85 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVS-----KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEE---QRDYVFYLAVGNYRLK 85 (152)
T ss_dssp HHHHHHHHHHHHHTTCCC-----HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHH---HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHccCCCc-----HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccc---hHHHHHHHHHHHHHcc
Confidence 356677799998888877 899999999999988 7779999999999999 7 5 7899999999999999
Q ss_pred cHHHHHHHHHHHHHHhcc
Q 007571 479 LAKESLLDAILFINECSQ 496 (598)
Q Consensus 479 dy~EAl~d~~kALel~~k 496 (598)
+|++|+..++++|+..|+
T Consensus 86 ~Y~~A~~y~~~lL~ieP~ 103 (152)
T 1pc2_A 86 EYEKALKYVRGLLQTEPQ 103 (152)
T ss_dssp CHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHhcCCC
Confidence 999999999999999885
No 191
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.97 E-value=5e-05 Score=80.06 Aligned_cols=89 Identities=6% Similarity=-0.093 Sum_probs=82.9
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHh-
Q 007571 400 SAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQ-QPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDML- 477 (598)
Q Consensus 400 k~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLg-dyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~L- 477 (598)
+.+..++|+..++++|.++|.+ ..++++|+.+...++ .+++++..++++|..+|+ +..+++.|+.++..+
T Consensus 66 ~~e~se~AL~lt~~~L~~nP~~-----ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK---ny~aW~hR~wlL~~l~ 137 (349)
T 3q7a_A 66 KEEKSERALELTEIIVRMNPAH-----YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK---SYQVWHHRLLLLDRIS 137 (349)
T ss_dssp TTCCSHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHC
T ss_pred hCCCCHHHHHHHHHHHHhCchh-----HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC---cHHHHHHHHHHHHHhc
Confidence 3445579999999999999999 999999999999999 599999999999999999 999999999999999
Q ss_pred h-cHHHHHHHHHHHHHHhcc
Q 007571 478 A-LAKESLLDAILFINECSQ 496 (598)
Q Consensus 478 G-dy~EAl~d~~kALel~~k 496 (598)
+ ++++++..+.++++..|+
T Consensus 138 ~~~~~~EL~~~~k~L~~dpk 157 (349)
T 3q7a_A 138 PQDPVSEIEYIHGSLLPDPK 157 (349)
T ss_dssp CSCCHHHHHHHHHHTSSCTT
T ss_pred CCChHHHHHHHHHHHHhCCC
Confidence 8 999999999999988765
No 192
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.96 E-value=6.2e-05 Score=67.40 Aligned_cols=89 Identities=10% Similarity=-0.223 Sum_probs=82.1
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCCCCcCHHHHHH
Q 007571 394 EGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLL----MQQPLAAISDATRALCLHNPLNRHAKSLWR 469 (598)
Q Consensus 394 eGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylK----LgdyeeAI~D~~kALeLdP~~~~~~KAyyR 469 (598)
.|..++..+.+++|+..|.+|.+. .+ +.+++|+|.+|.. .+++++|+..+++|.+. . ++.++++
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~-----~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g---~~~a~~~ 98 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NS-----GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N---DQDGCLI 98 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TC-----HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T---CHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CC-----HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C---CHHHHHH
Confidence 788888888999999999999987 34 7899999999999 89999999999999987 5 8899999
Q ss_pred HHHHHHH----hhcHHHHHHHHHHHHHHh
Q 007571 470 RAQAYDM----LALAKESLLDAILFINEC 494 (598)
Q Consensus 470 RAqAy~~----LGdy~EAl~d~~kALel~ 494 (598)
+|.+|.. .+++++|+..|+++.+.-
T Consensus 99 Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 99 LGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 9999999 999999999999999873
No 193
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.95 E-value=5.3e-05 Score=77.55 Aligned_cols=134 Identities=10% Similarity=-0.070 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc------------hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Q 007571 390 VVKLEGNSLFSAGNISGAASKYSEALALCPMRS------------KKERVVLYSNRAQCHLLMQQPLAAISDATRALCLH 457 (598)
Q Consensus 390 ~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~------------~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLd 457 (598)
...++|..+++.|+|.+|++.|.++++..|... ......++.++|.+|.++|+|++|+..+.+++.+.
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~ 85 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYM 85 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 355678889999999999999999999988741 13456678999999999999999999999999987
Q ss_pred CCCCcCHHH------HHHHHHHHHHhhcHHHHHHHHHHHHHHhccCCCCchhhccCChHHHHHHHHHHHHHHHHHHHHHH
Q 007571 458 NPLNRHAKS------LWRRAQAYDMLALAKESLLDAILFINECSQSNDPDLSLRQNKVPDYAERLVKKQMRAAWLFREAA 531 (598)
Q Consensus 458 P~~~~~~KA------yyRRAqAy~~LGdy~EAl~d~~kALel~~k~~d~~~~~r~~Ki~~~ierlL~Kqk~a~~~f~eA~ 531 (598)
+. ..++ +...+.++...|++++|+..+.+++....+..+ ......+...+.+.......+.+|.
T Consensus 86 ~~---~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~ 155 (434)
T 4b4t_Q 86 MQ---FAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKR-------VFLKHSLSIKLATLHYQKKQYKDSL 155 (434)
T ss_dssp HT---SCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSC-------CSSHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HH---ccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCc-------cHHHHHHHHHHHHHHHHccChHHHH
Confidence 76 3333 233566677778999999999999988775332 1223344444455544444444444
Q ss_pred Hh
Q 007571 532 IK 533 (598)
Q Consensus 532 ~k 533 (598)
..
T Consensus 156 ~~ 157 (434)
T 4b4t_Q 156 AL 157 (434)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 194
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.94 E-value=5.5e-05 Score=81.16 Aligned_cols=97 Identities=10% Similarity=-0.102 Sum_probs=48.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHH-HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHH
Q 007571 391 VKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERV-VLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWR 469 (598)
Q Consensus 391 lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a-~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyR 469 (598)
+...|..+.+.|++++|...|.+++++.|.+ . .+|.+.+.++.++|++++|+..+.+|++..|. ....++.
T Consensus 324 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~---~~~~~~~ 395 (530)
T 2ooe_A 324 YFAYADYEESRMKYEKVHSIYNRLLAIEDID-----PTLVYIQYMKFARRAEGIKSGRMIFKKAREDART---RHHVYVT 395 (530)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSSSSC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC---CTHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhCccccC-----chHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC---chHHHHH
Confidence 3444444455555555555555555555543 2 24555555555555555555555555555444 4444443
Q ss_pred HHHH-HHHhhcHHHHHHHHHHHHHHhc
Q 007571 470 RAQA-YDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 470 RAqA-y~~LGdy~EAl~d~~kALel~~ 495 (598)
.+.. +...|++++|...|+++++..|
T Consensus 396 ~a~~~~~~~~~~~~A~~~~e~al~~~p 422 (530)
T 2ooe_A 396 AALMEYYCSKDKSVAFKIFELGLKKYG 422 (530)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCChhHHHHHHHHHHHHCC
Confidence 3332 2234555555555555555544
No 195
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.00014 Score=74.53 Aligned_cols=112 Identities=11% Similarity=-0.069 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCch-HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC---Cc
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSK-KERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL---NR 462 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~-~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~---~~ 462 (598)
....+...|+.+++.|+|++|++.|.+++...+...+ .....++.+++.++...|+++.|+..+++++...+.. ..
T Consensus 54 ~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 133 (434)
T 4b4t_Q 54 QETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFL 133 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSS
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHH
Confidence 4556888999999999999999999999998766432 2345678888999999999999999999999764431 12
Q ss_pred CHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 463 HAKSLWRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 463 ~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
..+++.++|.+|...|+|.+|+..+.+++.......
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~ 169 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLD 169 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcc
Confidence 578999999999999999999999999998877644
No 196
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.83 E-value=3.8e-05 Score=78.74 Aligned_cols=96 Identities=13% Similarity=-0.107 Sum_probs=81.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHH
Q 007571 391 VKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRR 470 (598)
Q Consensus 391 lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRR 470 (598)
....+..+...|+|++|.+.|..++...|.. . .++++|.++++.++|++|+..+++++...++ .....+++.+
T Consensus 105 ~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~-----~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~-~~~~~a~~~L 177 (282)
T 4f3v_A 105 TMGFAACEAAQGNYADAMEALEAAPVAGSEH-----L-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDK-FLAGAAGVAH 177 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTSSCCTTCHH-----H-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCch-----H-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCc-ccHHHHHHHH
Confidence 3445677888999999999999999888865 5 8899999999999999999999988776322 0014589999
Q ss_pred HHHHHHhhcHHHHHHHHHHHHHH
Q 007571 471 AQAYDMLALAKESLLDAILFINE 493 (598)
Q Consensus 471 AqAy~~LGdy~EAl~d~~kALel 493 (598)
|.++..+|++++|+..|.+++..
T Consensus 178 G~al~~LG~~~eAl~~l~~a~~g 200 (282)
T 4f3v_A 178 GVAAANLALFTEAERRLTEANDS 200 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTS
T ss_pred HHHHHHCCCHHHHHHHHHHHhcC
Confidence 99999999999999999999843
No 197
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.69 E-value=0.00041 Score=73.78 Aligned_cols=106 Identities=13% Similarity=0.124 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCchHH--------------------------------------
Q 007571 387 AALVVKLEGNSLFSAGN---ISGAASKYSEALALCPMRSKKE-------------------------------------- 425 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~Gd---Y~eAIe~YskALel~P~~~~~~-------------------------------------- 425 (598)
.|-.+.-+|..++..++ +.+|+.+|.+||+++|++....
T Consensus 195 ~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~ 274 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELN 274 (372)
T ss_dssp GGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCC
Confidence 36677778888877654 5899999999999999971100
Q ss_pred -HHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 426 -RVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 426 -~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.+.+|.-+|..++..|++++|+..+++|+.++|+ .-+|.-+|.++...|++++|++.|.+|+.+.|.
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s----~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~ 342 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS----WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPG 342 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCS
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 0112222444556689999999999999999864 568889999999999999999999999999775
No 198
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.64 E-value=0.00045 Score=73.31 Aligned_cols=96 Identities=13% Similarity=-0.104 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCCC
Q 007571 388 ALVVKLEGNSLFSAG---NISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLL----MQQPLAAISDATRALCLHNPL 460 (598)
Q Consensus 388 A~~lKeeGN~lfk~G---dY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylK----LgdyeeAI~D~~kALeLdP~~ 460 (598)
.......|..++..| ++++|+..|.+|++. .+ +.++.|+|.+|.. .+++++|+..+++|++. +
T Consensus 328 ~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~-----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~- 397 (490)
T 2xm6_A 328 ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GE-----KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--G- 397 (490)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TC-----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CC-----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--C-
Confidence 345677888888866 899999999999987 34 7899999999999 89999999999999886 4
Q ss_pred CcCHHHHHHHHHHHHH----hhcHHHHHHHHHHHHHHhc
Q 007571 461 NRHAKSLWRRAQAYDM----LALAKESLLDAILFINECS 495 (598)
Q Consensus 461 ~~~~KAyyRRAqAy~~----LGdy~EAl~d~~kALel~~ 495 (598)
++.+++++|.+|.. .+++++|+..|+++++..+
T Consensus 398 --~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 398 --LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp --CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred --CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 67999999999999 8999999999999999873
No 199
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.63 E-value=0.00023 Score=60.53 Aligned_cols=67 Identities=19% Similarity=0.141 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 007571 388 ALVVKLEGNSLFSAGN---ISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNP 459 (598)
Q Consensus 388 A~~lKeeGN~lfk~Gd---Y~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~ 459 (598)
+..+...|..++..++ ..+|...+.+||+++|.+ +.++..+|..+++.|+|++|+..++++++.+|.
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~-----~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN-----EAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 5567788888876665 799999999999999999 999999999999999999999999999999998
No 200
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.60 E-value=0.00066 Score=71.98 Aligned_cols=95 Identities=8% Similarity=-0.198 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCC
Q 007571 387 AALVVKLEGNSLFS----AGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLL----MQQPLAAISDATRALCLHN 458 (598)
Q Consensus 387 ~A~~lKeeGN~lfk----~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylK----LgdyeeAI~D~~kALeLdP 458 (598)
.+......|..++. .+++++|+..|.+|++.. + +.++.++|.+|.. .+++++|+..+++|++.
T Consensus 74 ~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~--~-----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~-- 144 (490)
T 2xm6_A 74 YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG--L-----PQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ-- 144 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C-----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--C-----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--
Confidence 45567777888888 888888888888888753 4 6778888888888 78888888888888765
Q ss_pred CCCcCHHHHHHHHHHHHH----hhcHHHHHHHHHHHHHH
Q 007571 459 PLNRHAKSLWRRAQAYDM----LALAKESLLDAILFINE 493 (598)
Q Consensus 459 ~~~~~~KAyyRRAqAy~~----LGdy~EAl~d~~kALel 493 (598)
+ ++.+++.+|.+|.. .+++++|+..|+++++.
T Consensus 145 ~---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~ 180 (490)
T 2xm6_A 145 G---RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ 180 (490)
T ss_dssp T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred C---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 4 67888888888887 78888888888888875
No 201
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.56 E-value=0.00024 Score=75.64 Aligned_cols=86 Identities=10% Similarity=-0.079 Sum_probs=58.2
Q ss_pred HHHHHHHHHc----CCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHH-H--HHcCChHHHHHHHHHHHHhCCCCCcCH
Q 007571 392 KLEGNSLFSA----GNISGAASKYSEALALCPMRSKKERVVLYSNRAQC-H--LLMQQPLAAISDATRALCLHNPLNRHA 464 (598)
Q Consensus 392 KeeGN~lfk~----GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~c-y--lKLgdyeeAI~D~~kALeLdP~~~~~~ 464 (598)
...|..+... +++++|+..|.+|. |.+ +.+++|+|.+ | ...+++++|+..+++|++. + ++
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~-----~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g---~~ 283 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGY-----PASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--D---QP 283 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGS-----THHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--T---CH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCC-----HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--C---CH
Confidence 4556555444 57777777777776 555 6677777777 3 3567777777777777643 4 56
Q ss_pred HHHHHHHHHHHHhh-----cHHHHHHHHHHHH
Q 007571 465 KSLWRRAQAYDMLA-----LAKESLLDAILFI 491 (598)
Q Consensus 465 KAyyRRAqAy~~LG-----dy~EAl~d~~kAL 491 (598)
.+++.+|.+|. .| ++++|+..|+++.
T Consensus 284 ~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa 314 (452)
T 3e4b_A 284 RAELLLGKLYY-EGKWVPADAKAAEAHFEKAV 314 (452)
T ss_dssp HHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh
Confidence 77777777776 55 7777777777777
No 202
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.40 E-value=0.00059 Score=64.01 Aligned_cols=76 Identities=11% Similarity=-0.106 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-CCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC
Q 007571 388 ALVVKLEGNSLFSAG---NISGAASKYSEALALC-PMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH 463 (598)
Q Consensus 388 A~~lKeeGN~lfk~G---dY~eAIe~YskALel~-P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~ 463 (598)
.....+.|..+.+.+ +++++|..+++.++.+ |. ....+++|+|..|+++++|++|+..++++|+++|+ |
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~----~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~---n 104 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKE----EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQ---N 104 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHH----HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT---C
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcc----chHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC---C
Confidence 455778888899988 7889999999999987 52 24789999999999999999999999999999999 7
Q ss_pred HHHHHHH
Q 007571 464 AKSLWRR 470 (598)
Q Consensus 464 ~KAyyRR 470 (598)
..|..-+
T Consensus 105 ~QA~~Lk 111 (152)
T 1pc2_A 105 NQAKELE 111 (152)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7665433
No 203
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.38 E-value=0.00078 Score=69.58 Aligned_cols=88 Identities=8% Similarity=-0.124 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHh-
Q 007571 404 ISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLM-----QQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDML- 477 (598)
Q Consensus 404 Y~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKL-----gdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~L- 477 (598)
...|.....+||+++|.. ....+|.-+|..|.++ |+.++|...+++||+++|+. +..+++..|..+...
T Consensus 179 l~~A~a~lerAleLDP~~---~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~--~id~~v~YA~~l~~~~ 253 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSY---QEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH--DPDHHITYADALCIPL 253 (301)
T ss_dssp HHHHHHHHHHHHHHCTTH---HHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT--CSHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHhCCCc---ccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC--CchHHHHHHHHHHHhc
Confidence 478899999999999983 2378999999999996 99999999999999999972 389999999999884
Q ss_pred hcHHHHHHHHHHHHHHhcc
Q 007571 478 ALAKESLLDAILFINECSQ 496 (598)
Q Consensus 478 Gdy~EAl~d~~kALel~~k 496 (598)
|++++|...+++++..-+.
T Consensus 254 gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 254 NNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp TCHHHHHHHHHHHHHCCGG
T ss_pred CCHHHHHHHHHHHHcCCCC
Confidence 9999999999999998775
No 204
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.38 E-value=0.0014 Score=55.72 Aligned_cols=70 Identities=9% Similarity=-0.184 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC----CcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 427 VVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL----NRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 427 a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~----~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+.-++.+|..++..++|..|+.-+.+|++..+.. ......+..+|.++..+|+++.|+..+++++++.|+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 4556789999999999999999999999874210 116789999999999999999999999999999886
No 205
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.32 E-value=0.0019 Score=78.71 Aligned_cols=96 Identities=9% Similarity=-0.097 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC----
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL---- 460 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~---- 460 (598)
......+.+.|..+.+.|+|++||..|.+| ++ ...|.+.+.++.++|+|++|++.+..|++.++++
T Consensus 1102 vn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD-----~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt 1171 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DD-----PSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVET 1171 (1630)
T ss_pred cCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CC-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccH
Confidence 445566788899999999999999999876 44 7788889999999999999999998887666331
Q ss_pred --------------------CcCHHHHHHHHHHHHHhhcHHHHHHHHHHH
Q 007571 461 --------------------NRHAKSLWRRAQAYDMLALAKESLLDAILF 490 (598)
Q Consensus 461 --------------------~~~~KAyyRRAqAy~~LGdy~EAl~d~~kA 490 (598)
..+...+++.|..+...|+|++|+..|.++
T Consensus 1172 ~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1172 ELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 013446677777777777777777777765
No 206
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.25 E-value=0.00086 Score=59.83 Aligned_cols=78 Identities=10% Similarity=-0.084 Sum_probs=70.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHH----h
Q 007571 402 GNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDM----L 477 (598)
Q Consensus 402 GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~----L 477 (598)
+++++|+..|.+|.+..+.. +. +|.+|...+.+++|+..+++|.+. + ++.+++++|.+|.. .
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~-----a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g---~~~a~~~Lg~~y~~G~g~~ 74 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMF-----GC----LSLVSNSQINKQKLFQYLSKACEL--N---SGNGCRFLGDFYENGKYVK 74 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTT-----HH----HHHHTCTTSCHHHHHHHHHHHHHT--T---CHHHHHHHHHHHHHCSSSC
T ss_pred cCHHHHHHHHHHHHcCCCHh-----hh----HHHHHHcCCCHHHHHHHHHHHHcC--C---CHHHHHHHHHHHHcCCCCC
Confidence 47899999999999987554 32 999999999999999999999987 5 88999999999999 8
Q ss_pred hcHHHHHHHHHHHHHH
Q 007571 478 ALAKESLLDAILFINE 493 (598)
Q Consensus 478 Gdy~EAl~d~~kALel 493 (598)
+++++|+..|+++.+.
T Consensus 75 ~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 75 KDLRKAAQYYSKACGL 90 (138)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHcC
Confidence 9999999999999876
No 207
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.25 E-value=0.0013 Score=70.60 Aligned_cols=89 Identities=11% Similarity=0.005 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh----
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALAL----CPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL---- 456 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel----~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL---- 456 (598)
...+..+.+.|..+..+|+|++|+..|.++|.+ .|.+ ....+..++|+|.+|..+|+|++|+..+.+|+++
T Consensus 326 ~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 326 IYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 457888999999999999999999999999976 3332 4667999999999999999999999999999975
Q ss_pred -CCCCCcCH---HHHHHHHHHHHHh
Q 007571 457 -HNPLNRHA---KSLWRRAQAYDML 477 (598)
Q Consensus 457 -dP~~~~~~---KAyyRRAqAy~~L 477 (598)
-|+ |+ ..+..+++++..+
T Consensus 405 lG~~---Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 405 HGRE---HSLIEDLILLLEECDANI 426 (429)
T ss_dssp TCTT---SHHHHHHHHHHHHHHHHH
T ss_pred cCCC---ChHHHHHHHHHHHHHHHH
Confidence 455 44 4445556665544
No 208
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.14 E-value=0.003 Score=60.15 Aligned_cols=97 Identities=22% Similarity=0.153 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCC-chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC--C--
Q 007571 390 VVKLEGNSLFSAGNISGAASKYSEALALC---PMR-SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL--N-- 461 (598)
Q Consensus 390 ~lKeeGN~lfk~GdY~eAIe~YskALel~---P~~-~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~--~-- 461 (598)
.+.+....++..|.|+.|+-.++.++.+. |+- .......++...|.+++..++|..|...|.+||++.-.- +
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 46778888999999999999999988764 221 356778899999999999999999999999998653210 0
Q ss_pred ------------------cCHHHHHHHHHHHHHhhcHHHHHHH
Q 007571 462 ------------------RHAKSLWRRAQAYDMLALAKESLLD 486 (598)
Q Consensus 462 ------------------~~~KAyyRRAqAy~~LGdy~EAl~d 486 (598)
......|+.|.||..++++++|+..
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~ 144 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAI 144 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHH
Confidence 0125779999999999999999765
No 209
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.12 E-value=0.0045 Score=64.23 Aligned_cols=117 Identities=15% Similarity=-0.001 Sum_probs=89.2
Q ss_pred HHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh----------CCC
Q 007571 392 KLEGNSLFSAG--NISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL----------HNP 459 (598)
Q Consensus 392 KeeGN~lfk~G--dY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL----------dP~ 459 (598)
..+|...+..| +|.+|...|+++.+..|+. ....++.| |++++|+|++|..+++.++++ +|+
T Consensus 180 Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~---~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~ 253 (310)
T 3mv2_B 180 LAESYIKFATNKETATSNFYYYEELSQTFPTW---KTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLY 253 (310)
T ss_dssp HHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSH---HHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSS
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHhCCCc---ccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCC
Confidence 33453344444 9999999999999888861 01456666 899999999999999988887 588
Q ss_pred CCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCCCCchhhccCChHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 007571 460 LNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQSNDPDLSLRQNKVPDYAERLVKKQMRAAWLFREAAIKHGG 536 (598)
Q Consensus 460 ~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~d~~~~~r~~Ki~~~ierlL~Kqk~a~~~f~eA~~k~~~ 536 (598)
++.++.+++.+...+|+ +|.+.+.++.+..|+.. .+.........|.++..++..
T Consensus 254 ---~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp-----------------~i~d~~~k~~~Fd~~~~ky~~ 308 (310)
T 3mv2_B 254 ---KPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHA-----------------FIKHHQEIDAKFDELVRKYDT 308 (310)
T ss_dssp ---HHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH-----------------HHHHHHHHHHHHHHHHHTCC-
T ss_pred ---CHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh-----------------HHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999998 88899999999887621 223344556677787777653
No 210
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.12 E-value=0.0018 Score=69.87 Aligned_cols=71 Identities=7% Similarity=0.023 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----CCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALC----PMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL 456 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~----P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL 456 (598)
...+..+.+.|..+..+|+|++|+.+|.++|++. +.+ ....+..|+|+|.+|..+|+|++|+..+.+|+++
T Consensus 337 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 337 VYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY-SLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS-CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC-ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 4578889999999999999999999999999762 222 4667999999999999999999999999999976
No 211
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.12 E-value=0.0017 Score=69.17 Aligned_cols=91 Identities=14% Similarity=0.051 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHcC-----CHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCC
Q 007571 389 LVVKLEGNSLFSAG-----NISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLL----MQQPLAAISDATRALCLHNP 459 (598)
Q Consensus 389 ~~lKeeGN~lfk~G-----dY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylK----LgdyeeAI~D~~kALeLdP~ 459 (598)
......|..++ .| ++.+|+..|.+|+ |.+ +.++.|+|.+|.. ..++++|+..+++|.+. +
T Consensus 284 ~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~-----~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g 352 (452)
T 3e4b_A 284 RAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GRE-----VAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN--G 352 (452)
T ss_dssp HHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTC-----HHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT--T
T ss_pred HHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCC-----HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh--C
Confidence 34444554444 33 5555555555555 444 5555555555554 23555555555555542 2
Q ss_pred CCcCHHHHHHHHHHHHH----hhcHHHHHHHHHHHHHH
Q 007571 460 LNRHAKSLWRRAQAYDM----LALAKESLLDAILFINE 493 (598)
Q Consensus 460 ~~~~~KAyyRRAqAy~~----LGdy~EAl~d~~kALel 493 (598)
++.+.+++|.+|.. ..++.+|+..|.++.+.
T Consensus 353 ---~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~ 387 (452)
T 3e4b_A 353 ---QNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQ 387 (452)
T ss_dssp ---CTTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTT
T ss_pred ---hHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHC
Confidence 34555555555553 23555565555555554
No 212
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.90 E-value=0.0065 Score=55.28 Aligned_cols=84 Identities=12% Similarity=-0.049 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHH---HHHHHHHHHHhC-C-CCCcCHHHHHHHHHHHHHhhc
Q 007571 405 SGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLA---AISDATRALCLH-N-PLNRHAKSLWRRAQAYDMLAL 479 (598)
Q Consensus 405 ~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyee---AI~D~~kALeLd-P-~~~~~~KAyyRRAqAy~~LGd 479 (598)
..+-..|.+++...+.. ...-+|.|-|+.+-.+... +|..++..+.-+ | . ....+|.+|.+++.+|+
T Consensus 18 ~~~~~~y~~e~~~~~~s-----~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~---~Rd~lY~LAvg~yklg~ 89 (126)
T 1nzn_A 18 LKFEKKFQSEKAAGSVS-----KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEE---QRDYVFYLAVGNYRLKE 89 (126)
T ss_dssp HHHHHHHHHHHHHSCCC-----HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHH---HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhccCCCc-----HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcch---HHHHHHHHHHHHHHhhh
Confidence 45566688888777666 7889999999999887766 888888888877 5 4 67899999999999999
Q ss_pred HHHHHHHHHHHHHHhcc
Q 007571 480 AKESLLDAILFINECSQ 496 (598)
Q Consensus 480 y~EAl~d~~kALel~~k 496 (598)
|++|+..+...|+..|.
T Consensus 90 Y~~A~~~~~~lL~~eP~ 106 (126)
T 1nzn_A 90 YEKALKYVRGLLQTEPQ 106 (126)
T ss_dssp HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 99999999999999885
No 213
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.76 E-value=0.0054 Score=74.82 Aligned_cols=96 Identities=14% Similarity=-0.002 Sum_probs=77.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------C--------chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 007571 392 KLEGNSLFSAGNISGAASKYSEALALCPM---------R--------SKKERVVLYSNRAQCHLLMQQPLAAISDATRAL 454 (598)
Q Consensus 392 KeeGN~lfk~GdY~eAIe~YskALel~P~---------~--------~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kAL 454 (598)
.+-|..+...|.|++|+..|.++-..... + .+-..+.+|+++|.++..+|++++|+..|.+|
T Consensus 1053 ~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA- 1131 (1630)
T 1xi4_A 1053 PDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA- 1131 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-
Confidence 44588888888888888888776311100 0 00123789999999999999999999999886
Q ss_pred HhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 455 CLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 455 eLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
+ ++.+|++.|.++..+|+|++|++.|.++.+..+
T Consensus 1132 ----d---D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~ 1165 (1630)
T 1xi4_A 1132 ----D---DPSSYMEVVQAANTSGNWEELVKYLQMARKKAR 1165 (1630)
T ss_pred ----C---ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcc
Confidence 6 889999999999999999999999999998764
No 214
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.75 E-value=0.0018 Score=70.37 Aligned_cols=91 Identities=14% Similarity=0.085 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC----------
Q 007571 390 VVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNP---------- 459 (598)
Q Consensus 390 ~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~---------- 459 (598)
.+...|+.++..|+|++|+..|+++ . .|.++|.|+.++|+|++|+..+.+|. +|.
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-----~--------n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv 188 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-----S--------NFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACV 188 (449)
T ss_dssp -------------CTTTHHHHHHHT-----T--------CHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-----h--------hHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHH
Confidence 5566666666666666666666654 1 25666666666666666666666662 220
Q ss_pred --------------CCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 460 --------------LNRHAKSLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 460 --------------~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
-..++.-+......|...|++++|+..+++++.+.+
T Consensus 189 ~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ 238 (449)
T 1b89_A 189 DGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLER 238 (449)
T ss_dssp HTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTT
T ss_pred HcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcH
Confidence 000233344555788999999999999999987753
No 215
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.74 E-value=0.0069 Score=62.83 Aligned_cols=100 Identities=9% Similarity=-0.066 Sum_probs=68.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-CcCHHHH
Q 007571 391 VKLEGNSLFSAGNISGAASKYSEALALCP--MRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL-NRHAKSL 467 (598)
Q Consensus 391 lKeeGN~lfk~GdY~eAIe~YskALel~P--~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~-~~~~KAy 467 (598)
+.-.|..++..|++++|++.+.++|...| .. ..++.-.+.+|+++|+++.|.+.+.+..+.+|+. -..-...
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~-----lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l 177 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAEGT-----TELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMI 177 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHH
Confidence 34677777888888888888888887776 33 6777777888888888888888888877777710 0001334
Q ss_pred HHHHHH--HHHhh--cHHHHHHHHHHHHHHhc
Q 007571 468 WRRAQA--YDMLA--LAKESLLDAILFINECS 495 (598)
Q Consensus 468 yRRAqA--y~~LG--dy~EAl~d~~kALel~~ 495 (598)
..++.+ .+..| ++.+|...|+++.+..|
T Consensus 178 ~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p 209 (310)
T 3mv2_B 178 LNLAESYIKFATNKETATSNFYYYEELSQTFP 209 (310)
T ss_dssp HHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHhCC
Confidence 444444 55556 77888777777666554
No 216
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=96.65 E-value=9.8e-05 Score=77.61 Aligned_cols=118 Identities=12% Similarity=0.082 Sum_probs=74.1
Q ss_pred CCCCCCCCCcchhhhhHhHhhcCCCCcccccccHHHHHHHHHHhhc---------------------------CC--ccc
Q 007571 20 LPSQDDDGQVLPISGLWNTAMAHPNDPEFIELGIFECMAALIWKGL---------------------------KN--RRW 70 (598)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~lg~~~~~~~l~~~~~---------------------------~~--~~~ 70 (598)
||..++.....++..|+|+|-..-+=..+.+.|+.+.+..|+.... .+ ..+
T Consensus 41 ~~~~~~~~~~~A~~aL~nls~d~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~ 120 (354)
T 3nmw_A 41 MPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKA 120 (354)
T ss_dssp CCCGGGGTHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 5555555545689999999975333345688999999999995321 01 111
Q ss_pred cccCCccchhh--------------hhhhhhhccccc-HHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhcccc
Q 007571 71 LSHDQNIYIPY--------------YAAHIIGSYTMN-MEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLAT 135 (598)
Q Consensus 71 ~~~~~~~~~~y--------------y~ah~~gsy~~~-~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~ 135 (598)
.....+=.||. .|+-.++.-+.+ ..+....-+++|+||||+++|...-+.--++.|++||++|++
T Consensus 121 ~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~ 200 (354)
T 3nmw_A 121 TLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSA 200 (354)
T ss_dssp HHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 11001112443 344455555554 234445556899999999986443356678899999999998
Q ss_pred CC
Q 007571 136 YP 137 (598)
Q Consensus 136 ~~ 137 (598)
+.
T Consensus 201 ~~ 202 (354)
T 3nmw_A 201 HC 202 (354)
T ss_dssp TC
T ss_pred cC
Confidence 54
No 217
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.53 E-value=0.00058 Score=64.80 Aligned_cols=113 Identities=24% Similarity=0.253 Sum_probs=82.6
Q ss_pred HHHHhhhCCCCCCCCCcchhhhhHhHhhcCC-CCcccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhccc
Q 007571 13 ILKFFRELPSQDDDGQVLPISGLWNTAMAHP-NDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYT 91 (598)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~ 91 (598)
|..+.+-|-..|.+-+.-++..|.+++-..| +-..+.+.|++.....++. +.+.-+=..|+.++|..+
T Consensus 4 i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~-----------~~~~~v~~~a~~~L~~l~ 72 (252)
T 4hxt_A 4 VEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLT-----------STDSEVQKEAARALANIA 72 (252)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT-----------CSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHh-----------CCCHHHHHHHHHHHHHHH
Confidence 3444455544442224457777888877665 3334556677766665543 345677889999999999
Q ss_pred ccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccCC
Q 007571 92 MNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYP 137 (598)
Q Consensus 92 ~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 137 (598)
.+..+.....++.|+||+|+.+|+.. +.--++.|+++|++|+.+.
T Consensus 73 ~~~~~~~~~~~~~~~i~~l~~ll~~~-~~~v~~~a~~~L~~l~~~~ 117 (252)
T 4hxt_A 73 SGPDEAIKAIVDAGGVEVLVKLLTST-DSEVQKEAARALANIASGP 117 (252)
T ss_dssp TSCHHHHHHHHHTTHHHHHHHHTTCS-SHHHHHHHHHHHHHHTTSC
T ss_pred cCChHHHHHHHHCCCHHHHHHHHcCC-CHHHHHHHHHHHHHHHcCC
Confidence 99899999999999999999999964 4556889999999999643
No 218
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.36 E-value=0.06 Score=56.77 Aligned_cols=105 Identities=15% Similarity=0.075 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------------chHHHHHHHHHHHHHHHHcCChHHHHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMR-----------------SKKERVVLYSNRAQCHLLMQQPLAAISDA 450 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~-----------------~~~~~a~ly~NRA~cylKLgdyeeAI~D~ 450 (598)
...+...|......|+...|+..|.+|+.+.... ..+.+..+...++.+++.+|++.+|+..+
T Consensus 115 f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l 194 (388)
T 2ff4_A 115 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAEL 194 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 3445556666777899999999999999875221 01345667777889999999999999999
Q ss_pred HHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 451 TRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 451 ~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
.+++..+|- +-.+|..+-.+|+..|+..+|+..|.++-+.+.
T Consensus 195 ~~~~~~~P~---~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~ 236 (388)
T 2ff4_A 195 EALTFEHPY---REPLWTQLITAYYLSDRQSDALGAYRRVKTTLA 236 (388)
T ss_dssp HHHHHHSTT---CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 999999999 999999999999999999999999999876543
No 219
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=96.02 E-value=0.0024 Score=61.26 Aligned_cols=118 Identities=19% Similarity=0.201 Sum_probs=87.9
Q ss_pred hHHHHHhhhCCCCCCCCCcchhhhhHhHhhc-CCCCcccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhc
Q 007571 11 ASILKFFRELPSQDDDGQVLPISGLWNTAMA-HPNDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGS 89 (598)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gs 89 (598)
-.+-.|++.|.+.|.+.+.-++..|.+++-. .++-..+.+.|++.-...|+ ++.+.-+=.+|+.++|.
T Consensus 12 ~~~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL-----------~~~~~~v~~~a~~~L~~ 80 (252)
T 4db8_A 12 SELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLL-----------SSPNEQILQEALWALSN 80 (252)
T ss_dssp CSHHHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGG-----------GCSCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHH-----------cCCCHHHHHHHHHHHHH
Confidence 3456677778777766666677777665543 22223566667766665554 33445677899999999
Q ss_pred ccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccCCCch
Q 007571 90 YTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTF 140 (598)
Q Consensus 90 y~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f 140 (598)
.+....++....++.|+||+|+.+|+.. .+--|+.|+++|++|+..+..-
T Consensus 81 l~~~~~~~~~~i~~~g~i~~L~~lL~~~-~~~v~~~a~~~L~~l~~~~~~~ 130 (252)
T 4db8_A 81 IASGGNEQIQAVIDAGALPALVQLLSSP-NEQILQEALWALSNIASGGNEQ 130 (252)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHTTSCHHH
T ss_pred HhcCCHHHHHHHHHcCCHHHHHHHHcCC-CHHHHHHHHHHHHHhhcCCchH
Confidence 9998889999999999999999999985 5666899999999998765443
No 220
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=95.72 E-value=0.0068 Score=56.45 Aligned_cols=96 Identities=21% Similarity=0.219 Sum_probs=74.5
Q ss_pred chhhhhHhHhhcCCCC-cccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 30 LPISGLWNTAMAHPND-PEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 30 ~~~~~~~~~~~~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
-++..|.+++...|+. ..+.+.|++.-+..|+. +.+.-|=..|+.++|..+....+.....++.|+||
T Consensus 31 ~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~-----------~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~ 99 (210)
T 4db6_A 31 SALRKLSQIASGGNEQIQAVIDAGALPALVQLLS-----------SPNEQILQEALWALSNIASGGNEQIQAVIDAGALP 99 (210)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT-----------CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHc-----------CCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHH
Confidence 4677777877544332 24556677776666653 34566778899999999988889999999999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCC
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYP 137 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 137 (598)
+|+.+|... ..--|+.|+.||++|+.+.
T Consensus 100 ~L~~lL~~~-~~~v~~~a~~~L~~l~~~~ 127 (210)
T 4db6_A 100 ALVQLLSSP-NEQILQEALWALSNIASGG 127 (210)
T ss_dssp HHHHHTTCS-CHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHcCC-cHHHHHHHHHHHHHHHcCC
Confidence 999999877 5666889999999999754
No 221
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=95.67 E-value=0.045 Score=58.14 Aligned_cols=66 Identities=11% Similarity=0.056 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNP 459 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~ 459 (598)
+..+...|..++..|++++|+..+++|+.++|+ ...|.-+|.++...|++++|+..+.+|+.++|.
T Consensus 277 a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s------~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~ 342 (372)
T 3ly7_A 277 SIIYQIKAVSALVKGKTDESYQAINTGIDLEMS------WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPG 342 (372)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 455666777788889999999999999999975 677888999999999999999999999999998
No 222
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=95.60 E-value=0.0016 Score=74.65 Aligned_cols=65 Identities=23% Similarity=0.145 Sum_probs=53.3
Q ss_pred cCCccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchh-hHHHHHHHHhhccccCC
Q 007571 73 HDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTW-VEQRVAVRALGHLATYP 137 (598)
Q Consensus 73 ~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~w-ve~r~~~r~l~h~a~~~ 137 (598)
++.+.-|=..|+.+|+..+.+..+.....++.|+||+|+++|.-.-++ --++.|++|||+|++..
T Consensus 409 ~~~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~ 474 (780)
T 2z6g_A 409 GSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRH 474 (780)
T ss_dssp TCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSS
T ss_pred cCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence 344555667899999999998888888889999999999999864455 56788999999998753
No 223
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=95.51 E-value=0.0013 Score=73.08 Aligned_cols=66 Identities=23% Similarity=0.130 Sum_probs=54.4
Q ss_pred cCCccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccch-hhHHHHHHHHhhccccCCC
Q 007571 73 HDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLT-WVEQRVAVRALGHLATYPS 138 (598)
Q Consensus 73 ~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~-wve~r~~~r~l~h~a~~~~ 138 (598)
++.+.-+=..|+.+++..+.+..+.....++.|+||+|+++|.-.=+ +--+..|++||++|++...
T Consensus 273 ~~~d~~v~~~a~~aL~~L~~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~ 339 (644)
T 2z6h_A 273 GSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQ 339 (644)
T ss_dssp TCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSST
T ss_pred cCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHHccCCcHHHHHHHHHHHHHHhcCCc
Confidence 45566677889999999998888888888999999999999985433 5667889999999998644
No 224
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.36 E-value=0.044 Score=52.07 Aligned_cols=84 Identities=24% Similarity=0.222 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCch-----------------HHHHHHHHHHHHHHHHcCChHHH
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALC---PMRSK-----------------KERVVLYSNRAQCHLLMQQPLAA 446 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~---P~~~~-----------------~~~a~ly~NRA~cylKLgdyeeA 446 (598)
.++.+.-.|+.+|.+++|..|...|.+||++. +.... .....+.+..|.||.+++++.+|
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 58888999999999999999999999998763 21100 00136778899999999999999
Q ss_pred HHHHHHHHHhCCCCCcCHHHHHHHHHHH
Q 007571 447 ISDATRALCLHNPLNRHAKSLWRRAQAY 474 (598)
Q Consensus 447 I~D~~kALeLdP~~~~~~KAyyRRAqAy 474 (598)
|...+.. |...+.+|.-.-+|+.|
T Consensus 142 i~~Le~I----p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 142 IAILDGI----PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHTS----CGGGCCHHHHHHHHHHC
T ss_pred HHHHhcC----CchhcCHHHHHHHHHHh
Confidence 9875443 33233566666555543
No 225
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.31 E-value=0.1 Score=55.74 Aligned_cols=104 Identities=10% Similarity=-0.144 Sum_probs=84.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC-CchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC----CCCCcCHHHH
Q 007571 393 LEGNSLFSAGNISGAASKYSEALALCPM-RSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLH----NPLNRHAKSL 467 (598)
Q Consensus 393 eeGN~lfk~GdY~eAIe~YskALel~P~-~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLd----P~~~~~~KAy 467 (598)
..|..++..|+|.+|++.+++.++.+.. +.+.....+|......|..++++.++...+++|.... |++...++..
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 5788899999999999999999987654 2356789999999999999999999999999997654 3321123344
Q ss_pred HHHHHHHH-HhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYD-MLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~-~LGdy~EAl~d~~kALel~~k 496 (598)
..-|..++ ..++|+.|..+|..+++.+..
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~ 213 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEGFDS 213 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHTT
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhcccc
Confidence 44578888 789999999999999877754
No 226
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=95.09 E-value=0.016 Score=55.34 Aligned_cols=96 Identities=22% Similarity=0.232 Sum_probs=75.4
Q ss_pred chhhhhHhHhhcCCCC-cccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 30 LPISGLWNTAMAHPND-PEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 30 ~~~~~~~~~~~~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
.++..|+|++...++- ..+...|++.-+..|+ ++.+.-+=..|+.++|..+....+.....++.|+||
T Consensus 115 ~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL-----------~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~ 183 (252)
T 4db8_A 115 EALWALSNIASGGNEQIQAVIDAGALPALVQLL-----------SSPNEQILQEALWALSNIASGGNEQIQAVIDAGALP 183 (252)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGG-----------GCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHH
T ss_pred HHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHH-----------hCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHH
Confidence 4777888888766555 5566667776665554 334566778999999999998888888899999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCC
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYP 137 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 137 (598)
+|+++|... ..--++.|+++|+.|++..
T Consensus 184 ~L~~ll~~~-~~~v~~~a~~~L~~l~~~~ 211 (252)
T 4db8_A 184 ALVQLLSSP-NEQILQEALWALSNIASGG 211 (252)
T ss_dssp HHHHGGGCS-SHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHCCC-CHHHHHHHHHHHHHHhcCC
Confidence 999999987 4445889999999999654
No 227
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=95.05 E-value=0.045 Score=58.63 Aligned_cols=97 Identities=22% Similarity=0.174 Sum_probs=78.5
Q ss_pred chhhhhHhHhhcCCCCcccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCchH
Q 007571 30 LPISGLWNTAMAHPNDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPP 109 (598)
Q Consensus 30 ~~~~~~~~~~~~~p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~ 109 (598)
-++..|+|++...|+.+....-|++..+..|+ ++.+.-|=..|+.+++..+-...+.....+.+|+||+
T Consensus 222 ~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL-----------~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~ 290 (528)
T 4b8j_A 222 NATWTLSNFCRGKPQPSFEQTRPALPALARLI-----------HSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPR 290 (528)
T ss_dssp HHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHT-----------TCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHH-----------CCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHH
Confidence 47888999998887766666667777766665 3345667788999999999888888888899999999
Q ss_pred HHHHhcccchhhHHHHHHHHhhccccCCC
Q 007571 110 LVELLRGRLTWVEQRVAVRALGHLATYPS 138 (598)
Q Consensus 110 l~~~~~~~~~wve~r~~~r~l~h~a~~~~ 138 (598)
|+.+|... ++--+..|+++||+|++...
T Consensus 291 Lv~lL~~~-~~~v~~~a~~~L~nl~~~~~ 318 (528)
T 4b8j_A 291 LVELLLHP-SPSVLIPALRTVGNIVTGDD 318 (528)
T ss_dssp HHHHTTCS-CHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHcCC-ChhHHHHHHHHHHHHHcCCH
Confidence 99999877 56778999999999998653
No 228
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=94.89 E-value=0.0044 Score=67.42 Aligned_cols=96 Identities=11% Similarity=0.050 Sum_probs=63.4
Q ss_pred hhhhhHhHhhcCCCCcccc--cccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhccccc-HHHHHHHHHhcCCc
Q 007571 31 PISGLWNTAMAHPNDPEFI--ELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMN-MEEFAESAVHAGVI 107 (598)
Q Consensus 31 ~~~~~~~~~~~~p~~~~~~--~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~-~~~~~~~av~~~~~ 107 (598)
+...|.|++...++.+.+. .-|++.-... |++..+.-+-..|+-.|+.-+.+ ..+.-..-+++|+|
T Consensus 220 Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~-----------LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI 288 (458)
T 3nmz_A 220 AGMALTNLTFGDVANKATLCSMKGCMRALVA-----------QLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSV 288 (458)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHCHHHHHHHHH-----------GGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHH
T ss_pred HHHHHHHHhCCCcccHHHHHHcCCcHHHHHH-----------HHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCH
Confidence 4455667776544333333 2343444433 34455666777888888887775 34555556789999
Q ss_pred hHHHHHhcccchhhHHHHHHHHhhccccCC
Q 007571 108 PPLVELLRGRLTWVEQRVAVRALGHLATYP 137 (598)
Q Consensus 108 ~~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 137 (598)
|||+++|...-+.--++.|++||+.|+++.
T Consensus 289 ~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~ 318 (458)
T 3nmz_A 289 KALMECALEVKKESTLKSVLSALWNLSAHC 318 (458)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHccCC
Confidence 999998644336667889999999999843
No 229
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=94.85 E-value=0.013 Score=55.45 Aligned_cols=96 Identities=24% Similarity=0.240 Sum_probs=73.5
Q ss_pred chhhhhHhHhhcCCCC-cccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 30 LPISGLWNTAMAHPND-PEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 30 ~~~~~~~~~~~~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
.++..|+|++...|+. ..+...|++.....++. +.+.-|=..|+.+++..+....+.....++.|+||
T Consensus 63 ~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~-----------~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~ 131 (252)
T 4hxt_A 63 EAARALANIASGPDEAIKAIVDAGGVEVLVKLLT-----------STDSEVQKEAARALANIASGPDEAIKAIVDAGGVE 131 (252)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT-----------CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHH
Confidence 4777888887653322 22334566666555543 45667788999999999988889999999999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCC
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYP 137 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 137 (598)
+|+.+|+..- +--++.|+++|++|++..
T Consensus 132 ~L~~~l~~~~-~~~~~~a~~~L~~l~~~~ 159 (252)
T 4hxt_A 132 VLVKLLTSTD-SEVQKEAARALANIASGP 159 (252)
T ss_dssp HHHHHTTCSC-HHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHcCCC-HHHHHHHHHHHHHHHcCC
Confidence 9999999665 445889999999999864
No 230
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=94.81 E-value=0.021 Score=53.11 Aligned_cols=66 Identities=20% Similarity=0.175 Sum_probs=56.9
Q ss_pred ccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccCCC
Q 007571 72 SHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPS 138 (598)
Q Consensus 72 ~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~ 138 (598)
+++.+.-+=..|+..|+..+....+.....+++|+||+|+++|+.. ..--|..|+++|+.|++...
T Consensus 21 L~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~-~~~v~~~a~~~L~~l~~~~~ 86 (210)
T 4db6_A 21 LNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSP-NEQILQEALWALSNIASGGN 86 (210)
T ss_dssp TTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHTTSCH
T ss_pred hcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCC-CHHHHHHHHHHHHHHhcCCc
Confidence 4456667778899999999988899999999999999999999987 66778999999999997653
No 231
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=94.76 E-value=0.12 Score=46.88 Aligned_cols=74 Identities=9% Similarity=-0.134 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-CCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCH
Q 007571 389 LVVKLEGNSLFSAGNISG---AASKYSEALALC-PMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHA 464 (598)
Q Consensus 389 ~~lKeeGN~lfk~GdY~e---AIe~YskALel~-P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~ 464 (598)
....+.|-.+.+..+-.. +|......+... | ...-.+++.+|..|+++|+|.+|...++..|+++|+ |.
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p----~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~---n~ 108 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK----EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQ---NN 108 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCc----chHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCC---CH
Confidence 345556666777666544 888888877754 3 235788888999999999999999999999999999 77
Q ss_pred HHHHH
Q 007571 465 KSLWR 469 (598)
Q Consensus 465 KAyyR 469 (598)
.|.--
T Consensus 109 QA~~L 113 (126)
T 1nzn_A 109 QAKEL 113 (126)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66443
No 232
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=94.70 E-value=0.1 Score=47.84 Aligned_cols=73 Identities=5% Similarity=-0.197 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 390 VVKLEGNSLFSAGN---ISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 390 ~lKeeGN~lfk~Gd---Y~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
...+-+-.+.+..+ ...+|...+..++..|.. +-.+++-+|..|+++|+|.+|...++..|+++|+ |..|
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~----~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~---N~QA 114 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR----RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN---NKQV 114 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG----HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTT---CHHH
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcch----hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCC---CHHH
Confidence 34455555555553 568999999999877643 5778888999999999999999999999999999 7765
Q ss_pred HHH
Q 007571 467 LWR 469 (598)
Q Consensus 467 yyR 469 (598)
.--
T Consensus 115 ~~L 117 (134)
T 3o48_A 115 GAL 117 (134)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 233
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=94.45 E-value=0.052 Score=58.04 Aligned_cols=111 Identities=15% Similarity=0.066 Sum_probs=82.2
Q ss_pred CCCCCcchhhhhHhHhhcCCCCc-ccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHH
Q 007571 24 DDDGQVLPISGLWNTAMAHPNDP-EFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAV 102 (598)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~p~~~-~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av 102 (598)
|++-+.-++..|.|++...|+.- .+...|.+.-+..|+. ..|.-+-..|+..++.-+....+.-..-|
T Consensus 15 ~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~-----------s~~~~~~~~A~~aL~nLa~~~~~~k~~i~ 83 (457)
T 1xm9_A 15 DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-----------SPNQNVQQAAAGALRNLVFRSTTNKLETR 83 (457)
T ss_dssp CTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTT-----------SSCHHHHHHHHHHHHHHHSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHc-----------CCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 33335567788888875544423 7888999888887763 34555678899999888777677777778
Q ss_pred hcCCchHHHHHhcccchhhHHHHHHHHhhccccCCCchhhhhh
Q 007571 103 HAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPTVAS 145 (598)
Q Consensus 103 ~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~~ 145 (598)
++|+||+|++||+..-+---|+-|+.||++|++++.+=.+|.+
T Consensus 84 ~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~ 126 (457)
T 1xm9_A 84 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA 126 (457)
T ss_dssp HTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHH
T ss_pred HcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHHh
Confidence 9999999999998333344578899999999999665555554
No 234
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=94.42 E-value=0.52 Score=43.72 Aligned_cols=71 Identities=6% Similarity=-0.176 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHH
Q 007571 390 VVKLEGNSLFSAGN---ISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKS 466 (598)
Q Consensus 390 ~lKeeGN~lfk~Gd---Y~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KA 466 (598)
...+.+..+.+..+ ..++|...+..+...|.. +-.+++.+|..|+++|+|.+|...++..|+++|+ |..|
T Consensus 41 t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~----~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~---n~QA 113 (144)
T 1y8m_A 41 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR----RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN---NKQV 113 (144)
T ss_dssp HHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST----HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCC---CHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc----hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC---cHHH
Confidence 34555566666654 468999999999888764 4677888999999999999999999999999999 7655
Q ss_pred H
Q 007571 467 L 467 (598)
Q Consensus 467 y 467 (598)
.
T Consensus 114 ~ 114 (144)
T 1y8m_A 114 G 114 (144)
T ss_dssp H
T ss_pred H
Confidence 3
No 235
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=94.34 E-value=0.028 Score=60.96 Aligned_cols=98 Identities=19% Similarity=0.295 Sum_probs=71.1
Q ss_pred hhhhhHhHhhcCCCCc--ccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 31 PISGLWNTAMAHPNDP--EFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 31 ~~~~~~~~~~~~p~~~--~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
++..+.++--..++.| +++..|++.-...|+ .++.|--|-+.||.+++.......+.....|.+|+||
T Consensus 96 a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL----------~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip 165 (529)
T 3tpo_A 96 ATQAARKLLSREKQPPIDNIIRAGLIPKFVSFL----------GKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIP 165 (529)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHH----------TCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHH----------cCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHH
Confidence 3444444433333333 456666665554443 3556777889999999999988889999999999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCCCc
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYPST 139 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~ 139 (598)
+|+.||...-.=| |..|+.|||.||.....
T Consensus 166 ~Lv~LL~s~~~~v-~e~A~~aL~nLa~~~~~ 195 (529)
T 3tpo_A 166 AFISLLASPHAHI-SEQAVWALGNIAGAGSA 195 (529)
T ss_dssp HHHHHTTCSCHHH-HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCCHHH-HHHHHHHHHHHhccCHH
Confidence 9999998765543 67899999999976543
No 236
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=94.20 E-value=0.11 Score=56.58 Aligned_cols=104 Identities=14% Similarity=-0.066 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHH----------------------HHHHHHHHHHHHHHcCCh
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKE----------------------RVVLYSNRAQCHLLMQQP 443 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~----------------------~a~ly~NRA~cylKLgdy 443 (598)
..+..+...|+.+++.|+|++|++.|.+|. +|...+.. .+.-...+..+|.+.|+|
T Consensus 146 ~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~ 223 (449)
T 1b89_A 146 NNVSNFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYF 223 (449)
T ss_dssp HHTTCHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCH
T ss_pred HHhhhHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCH
Confidence 344567778888888888888888888882 22100000 011123355789999999
Q ss_pred HHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHH--hhcHHHHHHHHHHHHHHh
Q 007571 444 LAAISDATRALCLHNPLNRHAKSLWRRAQAYDM--LALAKESLLDAILFINEC 494 (598)
Q Consensus 444 eeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~--LGdy~EAl~d~~kALel~ 494 (598)
++|++.++++|.+++. +...+..+|.+|.+ .++..++++.|...+++.
T Consensus 224 eEai~lLe~aL~le~a---h~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~ 273 (449)
T 1b89_A 224 EELITMLEAALGLERA---HMGMFTELAILYSKFKPQKMREHLELFWSRVNIP 273 (449)
T ss_dssp HHHHHHHHHHTTSTTC---CHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHH
T ss_pred HHHHHHHHHHhCCcHH---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999 99999999887654 577778877766555443
No 237
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=93.96 E-value=0.63 Score=52.87 Aligned_cols=98 Identities=7% Similarity=-0.232 Sum_probs=64.8
Q ss_pred HHHHHHHHHHcCCHHHHH-HHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-----------C
Q 007571 391 VKLEGNSLFSAGNISGAA-SKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLH-----------N 458 (598)
Q Consensus 391 lKeeGN~lfk~GdY~eAI-e~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLd-----------P 458 (598)
+...+.-+...|+..+|+ ..|.+|+..+|.+ ..++...|....+.|+++.|...+++++..- |
T Consensus 346 W~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s-----~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p 420 (679)
T 4e6h_A 346 WFNMANYQGEKNTDSTVITKYLKLGQQCIPNS-----AVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDP 420 (679)
T ss_dssp HHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccC
Confidence 444455555667777776 7788888777776 6777777777777777777777777777641 3
Q ss_pred CCC--------cCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHH
Q 007571 459 PLN--------RHAKSLWRRAQAYDMLALAKESLLDAILFINE 493 (598)
Q Consensus 459 ~~~--------~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel 493 (598)
... ...++|...+......|..+.|...|.+|++.
T Consensus 421 ~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 421 TNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred cchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 200 02345666666666667777777777777765
No 238
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=93.87 E-value=0.029 Score=57.40 Aligned_cols=94 Identities=16% Similarity=0.166 Sum_probs=70.9
Q ss_pred hhhhhHhHhhcCCCCc-ccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCchH
Q 007571 31 PISGLWNTAMAHPNDP-EFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPP 109 (598)
Q Consensus 31 ~~~~~~~~~~~~p~~~-~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~ 109 (598)
++..|.|++-.+|+-+ .|..-|.+.....|+.. .+.-+=--|+-.|+..+-...+..+..|++|+|||
T Consensus 145 A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~-----------~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~ 213 (296)
T 1xqr_A 145 ALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQ-----------QVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQ 213 (296)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHS-----------SCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHH
T ss_pred HHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHH
Confidence 5666667666555544 57788888888877753 23344456777777777666778888899999999
Q ss_pred HHHHhcccchhhHHHHHHHHhhccccC
Q 007571 110 LVELLRGRLTWVEQRVAVRALGHLATY 136 (598)
Q Consensus 110 l~~~~~~~~~wve~r~~~r~l~h~a~~ 136 (598)
|++||+.. .--=|..|++||+.|++.
T Consensus 214 Lv~LL~~~-d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 214 LVALVRTE-HSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHHTSC-CSTHHHHHHHHHHHHHTT
T ss_pred HHHHHcCC-ChhHHHHHHHHHHHHHhC
Confidence 99999976 445578999999999988
No 239
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=93.77 E-value=0.56 Score=43.02 Aligned_cols=86 Identities=7% Similarity=-0.078 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHcCC---hHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCCCCchh
Q 007571 427 VVLYSNRAQCHLLMQQ---PLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQSNDPDLS 503 (598)
Q Consensus 427 a~ly~NRA~cylKLgd---yeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~d~~~~ 503 (598)
+..-+|.|-|+.+-.+ ...+|..++..+..+|.. ....+|.+|.+++.+|+|++|+......|+..|.+.
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~--~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~----- 112 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR--RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK----- 112 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG--HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCH-----
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcch--hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCH-----
Confidence 5777788888887765 457899999999888851 578999999999999999999999999999988632
Q ss_pred hccCChHHHHHHHHHHHHHHH
Q 007571 504 LRQNKVPDYAERLVKKQMRAA 524 (598)
Q Consensus 504 ~r~~Ki~~~ierlL~Kqk~a~ 524 (598)
....+..++.+.+...
T Consensus 113 -----QA~~Lk~~Ie~ki~kd 128 (134)
T 3o48_A 113 -----QVGALKSMVEDKIQKE 128 (134)
T ss_dssp -----HHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHhh
Confidence 3334555555555443
No 240
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.32 E-value=0.2 Score=53.47 Aligned_cols=106 Identities=9% Similarity=-0.024 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC---CCCcCH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHN---PLNRHA 464 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP---~~~~~~ 464 (598)
.......|.-+++.|+++.|++.|.++...+... .....++.+...+++..++|..+...+++|-.+-. ++....
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~--~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~ 208 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAIST--GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRN 208 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC--CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHH
Confidence 3456778999999999999999999999987654 44678899999999999999999999999976532 211122
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 465 KSLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 465 KAyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
+.....|.+++..++|.+|-..|..++....
T Consensus 209 ~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 209 RYKTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 4444557778888999999999988876654
No 241
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.29 E-value=1.3 Score=51.17 Aligned_cols=61 Identities=16% Similarity=0.178 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRA 453 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kA 453 (598)
+.-+..++.-+.++|+|+-|++.-.+|+...|.+ ...|..+|.||.++|+|+.|+--.+-+
T Consensus 337 ~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPse-----F~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYELALGVSNTSTELALDS-----FESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC-----HHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred hHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchh-----hHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 4567778888999999999999999999999999 999999999999999999999655544
No 242
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=93.28 E-value=0.15 Score=54.85 Aligned_cols=96 Identities=21% Similarity=0.170 Sum_probs=74.5
Q ss_pred chhhhhHhHhhcC-CCCcccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 30 LPISGLWNTAMAH-PNDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 30 ~~~~~~~~~~~~~-p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
-++..|+|++... |.-+.+..-|++..+..|+. +.+.-|=..|+.+|+..+-...+.....+..|+||
T Consensus 234 ~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~-----------~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~ 302 (530)
T 1wa5_B 234 TATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIY-----------SMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPK 302 (530)
T ss_dssp HHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTT-----------CCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHH
Confidence 3677888888766 55555555577776666652 34556778899999999888777777888999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCC
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYP 137 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 137 (598)
.|+++|... .|--+..|+++||+|++..
T Consensus 303 ~Lv~lL~~~-~~~v~~~a~~~L~~l~~~~ 330 (530)
T 1wa5_B 303 RLVELLSHE-STLVQTPALRAVGNIVTGN 330 (530)
T ss_dssp HHHHGGGCS-CHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHCCC-ChhhHHHHHHHHHHHHcCC
Confidence 999999854 6777889999999999764
No 243
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=93.21 E-value=0.38 Score=54.64 Aligned_cols=82 Identities=11% Similarity=-0.008 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHH-HHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHH
Q 007571 405 SGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAI-SDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKES 483 (598)
Q Consensus 405 ~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI-~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EA 483 (598)
......|.+||..+|.. ..+|..-|.-....|+.++|+ ..+.+|+...|. +...++..+......|+++.|
T Consensus 326 ~Rv~~~Ye~aL~~~p~~-----~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~---s~~Lwl~~a~~ee~~~~~e~a 397 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFA-----PEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPN---SAVLAFSLSEQYELNTKIPEI 397 (679)
T ss_dssp HHHHHHHHHHHHHTTTC-----HHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCC-----HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHhCCHHHH
Confidence 45677899999999999 999999999999999999998 999999999999 888889999999999999999
Q ss_pred HHHHHHHHHHh
Q 007571 484 LLDAILFINEC 494 (598)
Q Consensus 484 l~d~~kALel~ 494 (598)
...|+++++..
T Consensus 398 R~iyek~l~~l 408 (679)
T 4e6h_A 398 ETTILSCIDRI 408 (679)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 244
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=93.20 E-value=0.097 Score=51.94 Aligned_cols=105 Identities=9% Similarity=0.027 Sum_probs=79.5
Q ss_pred chhhhhHhHhhcCC-CCcccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 30 LPISGLWNTAMAHP-NDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 30 ~~~~~~~~~~~~~p-~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
-+..-|.|++...| +.-.+.+.|.+...-.|+. ..+.-+=..|+..++.-+....+.-..-+++|.||
T Consensus 29 ~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~-----------s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~ 97 (233)
T 3tt9_A 29 AAATFIQHECFQKSEARKRVNQLRGILKLLQLLK-----------VQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVP 97 (233)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGG-----------CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHH
Confidence 46677888886544 4556778888877666643 34566778899999998887667777777999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCCCchhhhhh
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYPSTFPTVAS 145 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~~ 145 (598)
||+.||+..=++--|+-|+.||.+|++++..=+.+.+
T Consensus 98 ~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i~~ 134 (233)
T 3tt9_A 98 RLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLMIT 134 (233)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHHHh
Confidence 9999998433677899999999999998876554443
No 245
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=93.02 E-value=0.91 Score=42.08 Aligned_cols=68 Identities=7% Similarity=-0.144 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHcCC---hHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 427 VVLYSNRAQCHLLMQQ---PLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 427 a~ly~NRA~cylKLgd---yeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
...-+|.|-|+.+-.+ -.++|..++..+.-+|.. ....+|.+|.+++.+|+|++|.......|+..|.
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~--~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~ 109 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR--RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN 109 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST--HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc--hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 6778888888888775 457899999999988852 6789999999999999999999999999999886
No 246
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=92.61 E-value=0.51 Score=48.70 Aligned_cols=68 Identities=13% Similarity=0.113 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCC-CchHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCC
Q 007571 387 AALVVKLEGNSLFSA-----GNISGAASKYSEALALCPM-RSKKERVVLYSNRAQCHLL-MQQPLAAISDATRALCLHNP 459 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~-----GdY~eAIe~YskALel~P~-~~~~~~a~ly~NRA~cylK-LgdyeeAI~D~~kALeLdP~ 459 (598)
....+.-.|..+++. |+.++|..+|.+||+++|+ + ...+...|.-+.. ++++++|...+++||..+|.
T Consensus 198 ~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~-----id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 198 EGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHD-----PDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTC-----SHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred cCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCC-----chHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 466777888888884 9999999999999999996 4 6777778888877 59999999999999999877
No 247
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=92.45 E-value=0.29 Score=50.32 Aligned_cols=96 Identities=19% Similarity=0.150 Sum_probs=72.9
Q ss_pred chhhhhHhHhhcC-CCCcccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 30 LPISGLWNTAMAH-PNDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 30 ~~~~~~~~~~~~~-p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
.++..|+|++... |.-.....-|++..+..++. +.+.-+=..|+..++..+-+..+.....+..|+||
T Consensus 169 ~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~-----------~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~ 237 (450)
T 2jdq_A 169 NAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLF-----------VSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCR 237 (450)
T ss_dssp HHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTT-----------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHH
T ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHc-----------cCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHH
Confidence 4778888888765 44333333577777766653 33455667889999998888777788888999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCC
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYP 137 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 137 (598)
+|+.+|.. -.|--+..|+++||.|++..
T Consensus 238 ~L~~ll~~-~~~~v~~~a~~~L~~l~~~~ 265 (450)
T 2jdq_A 238 RLVELLMH-NDYKVVSPALRAVGNIVTGD 265 (450)
T ss_dssp HHHHHTTC-SCHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHCC-CchhHHHHHHHHHHHHhhCC
Confidence 99999984 46777889999999999864
No 248
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=92.25 E-value=0.059 Score=60.38 Aligned_cols=104 Identities=13% Similarity=0.074 Sum_probs=75.3
Q ss_pred hhhhhHhHhhcC-CCCcccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhccccc-HHHHHHHHHhcCCch
Q 007571 31 PISGLWNTAMAH-PNDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMN-MEEFAESAVHAGVIP 108 (598)
Q Consensus 31 ~~~~~~~~~~~~-p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~-~~~~~~~av~~~~~~ 108 (598)
+...|.|+|... ++--.+...|.+.-+..|+. ..|.-+=..|+-.++.-+.. ..+.-..-+++|+||
T Consensus 68 Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~-----------s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp 136 (584)
T 3l6x_A 68 AAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLD-----------HPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVP 136 (584)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGG-----------CSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHC-----------CCCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHH
Confidence 555566666422 22234666777766666553 34667788999999998885 477777788999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCCCchhhhhh
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYPSTFPTVAS 145 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~~ 145 (598)
||+.||+.--+-.-|+.|+.||.+|++++..=.+|.+
T Consensus 137 ~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~ 173 (584)
T 3l6x_A 137 ALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVD 173 (584)
T ss_dssp HHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHHh
Confidence 9999999544444589999999999998766555653
No 249
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=92.19 E-value=0.1 Score=56.47 Aligned_cols=99 Identities=20% Similarity=0.290 Sum_probs=69.1
Q ss_pred hhhhhHhHhhcCCCCc--ccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 31 PISGLWNTAMAHPNDP--EFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 31 ~~~~~~~~~~~~p~~~--~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
++..+.++--..+|-| +.+.-|++--.-.|+ .+..|.-|=++||-+++...-...+....-|++|+||
T Consensus 77 a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL----------~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp 146 (510)
T 3ul1_B 77 ATQAARKLLSREKQPPIDNIIRAGLIPKFVSFL----------GKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIP 146 (510)
T ss_dssp HHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHT----------TCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHH
T ss_pred HHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHH----------CCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHH
Confidence 4444444433333322 455556554444433 3456667789999999988777788888889999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCCCch
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYPSTF 140 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f 140 (598)
+|+.||+..=. --|+.|+.|||.||.....+
T Consensus 147 ~Lv~lL~s~~~-~v~e~A~~aL~nLa~d~~~~ 177 (510)
T 3ul1_B 147 AFISLLASPHA-HISEQAVWALGNIAGDGSAF 177 (510)
T ss_dssp HHHHHTTCSCH-HHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcCCCH-HHHHHHHHHHHHHHhCCHHH
Confidence 99999987544 34788999999999875444
No 250
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=91.56 E-value=0.086 Score=56.43 Aligned_cols=96 Identities=18% Similarity=0.228 Sum_probs=69.8
Q ss_pred hhhhhHhHhhcCCCC--cccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 31 PISGLWNTAMAHPND--PEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 31 ~~~~~~~~~~~~p~~--~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
++..|-+++-..++. ..+..-|++.-+..++.. +.+.-|=..|+.++|...-...++....+++|+||
T Consensus 94 A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~----------~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~ 163 (528)
T 4b8j_A 94 ATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTR----------EDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVP 163 (528)
T ss_dssp HHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTC----------TTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHH
T ss_pred HHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCC----------CCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHH
Confidence 444455554443322 245556766666655532 22366778899999999988889999999999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCC
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYP 137 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 137 (598)
+|+.+|... +.--++.|++||+.|+...
T Consensus 164 ~L~~lL~~~-~~~v~~~a~~aL~~l~~~~ 191 (528)
T 4b8j_A 164 IFVKLLGSS-SDDVREQAVWALGNVAGDS 191 (528)
T ss_dssp HHHHHTTCS-CHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCC-CHHHHHHHHHHHHHHhCCC
Confidence 999999875 5666889999999998654
No 251
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=91.18 E-value=0.47 Score=54.68 Aligned_cols=61 Identities=15% Similarity=0.007 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 428 VLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 428 ~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
.++.--|.-++..|+|+-|+..+.+|+.+-|. ..+.|++++++|..+|+|+.|+-. |+.||
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPs---eF~tW~~La~vYi~l~d~e~ALLt----LNScP 398 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALD---SFESWYNLARCHIKKEEYEKALFA----INSMP 398 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS---CHHHHHHHHHHHHHTTCHHHHHHH----HHHSC
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCch---hhHHHHHHHHHHHHhccHHHHHHH----HhcCC
Confidence 34444566667889999999999999999999 999999999999999999999754 55665
No 252
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=90.39 E-value=0.12 Score=55.60 Aligned_cols=62 Identities=19% Similarity=0.218 Sum_probs=52.9
Q ss_pred ccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccCCC
Q 007571 76 NIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPS 138 (598)
Q Consensus 76 ~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~ 138 (598)
|.-|=+.|+.++|...-...++....+..|+||+|+.+|... ..--++.|+++|++|++...
T Consensus 144 ~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~-~~~vr~~A~~aL~~l~~~~~ 205 (530)
T 1wa5_B 144 PEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTG-SVEVKEQAIWALGNVAGDST 205 (530)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCC-CHHHHHHHHHHHHHHhCCCc
Confidence 667788999999998887788888888999999999999864 55568889999999997643
No 253
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=90.35 E-value=2.8 Score=39.49 Aligned_cols=88 Identities=16% Similarity=-0.068 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHhCCCCch---HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHH
Q 007571 405 SGAASKYSEALALCPMRSK---KERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAK 481 (598)
Q Consensus 405 ~eAIe~YskALel~P~~~~---~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~ 481 (598)
+.-++.|++|+...|...+ .-.+-++.+-| .+..+++.++|-..|..++.+... .+|.+.-.|+--...|+..
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA-~~~ei~D~d~aR~vy~~a~~~hKk---FAKiwi~~AqFEiRqgnl~ 111 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFA-ELKAIQEPDDARDYFQMARANCKK---FAFVHISFAQFELSQGNVK 111 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHH-HHHHHHCGGGCHHHHHHHHHHCTT---BHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHHcccHH
Confidence 5667889999999886421 23466666555 457789999999999999999666 8999999999999999999
Q ss_pred HHHHHHHHHHHHhcc
Q 007571 482 ESLLDAILFINECSQ 496 (598)
Q Consensus 482 EAl~d~~kALel~~k 496 (598)
.|..-+.+|+..+++
T Consensus 112 kARkILg~AiG~~~k 126 (161)
T 4h7y_A 112 KSKQLLQKAVERGAV 126 (161)
T ss_dssp HHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHhccCCC
Confidence 999999999999886
No 254
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=90.04 E-value=0.32 Score=52.61 Aligned_cols=110 Identities=19% Similarity=0.202 Sum_probs=80.0
Q ss_pred hhhhhHhHhhcCCCC-cccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCchH
Q 007571 31 PISGLWNTAMAHPND-PEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPP 109 (598)
Q Consensus 31 ~~~~~~~~~~~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~ 109 (598)
+...|||+|...|+. -.+.+.|++.....| +...+.-+=.+|+..+|.......++....+++|+|||
T Consensus 140 Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~L-----------L~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~ 208 (529)
T 3tpo_A 140 SAWALTNIASGTSEQTKAVVDGGAIPAFISL-----------LASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDP 208 (529)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHTTHHHHHHHH-----------TTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCHHHHHHH-----------HcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHH
Confidence 566788888654433 235556666655444 45567778889999999999999999999999999999
Q ss_pred HHHHhcccc----hhhHHHHHHHHhhccccCCCchhhhhhhHHHHH
Q 007571 110 LVELLRGRL----TWVEQRVAVRALGHLATYPSTFPTVASHAEILE 151 (598)
Q Consensus 110 l~~~~~~~~----~wve~r~~~r~l~h~a~~~~~f~~~~~~~~~~~ 151 (598)
|+.+|...- +---+|.|+.+|..++......+.+..-..+++
T Consensus 209 Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp 254 (529)
T 3tpo_A 209 LLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILP 254 (529)
T ss_dssp HHHTTCSSCGGGSCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHH
T ss_pred HHHHHhccchhHhHHHHHHHHHHHHHHHHhcccchhhHHHHhhHHH
Confidence 999998542 223478899999999988776665543334443
No 255
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.76 E-value=8.8 Score=41.02 Aligned_cols=110 Identities=12% Similarity=-0.121 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH----hCCCCC
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALA-LCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALC----LHNPLN 461 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALe-l~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALe----LdP~~~ 461 (598)
.+.--...+..++..|+|.+|......... ..-...+.....++.--...|+..++|..|...++++.. ..+++.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~ 215 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHH
Confidence 344455678889999999999999888653 333335677888999999999999999999999998742 222211
Q ss_pred cCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 462 RHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 462 ~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
+..+-+...|..+..-++|.+|-.+|..+++....
T Consensus 216 lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~ 250 (445)
T 4b4t_P 216 LKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAI 250 (445)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcccc
Confidence 12234455688888899999999999999876543
No 256
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=89.19 E-value=0.59 Score=50.45 Aligned_cols=111 Identities=20% Similarity=0.238 Sum_probs=80.9
Q ss_pred chhhhhHhHhhcCCCC-cccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 30 LPISGLWNTAMAHPND-PEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 30 ~~~~~~~~~~~~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
-+...|+|+|...|+. -.+.+.|++.....|+ +..+.-|=.+|+-.+|....+.+++....++.|+||
T Consensus 120 ~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL-----------~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~ 188 (510)
T 3ul1_B 120 ESAWALTNIASGTSEQTKAVVDGGAIPAFISLL-----------ASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAID 188 (510)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHT-----------TCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHH-----------cCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChH
Confidence 4777888888644322 1245566666555543 456777889999999999999999999999999999
Q ss_pred HHHHHhccc----chhhHHHHHHHHhhccccCCCchhhhhhhHHHHH
Q 007571 109 PLVELLRGR----LTWVEQRVAVRALGHLATYPSTFPTVASHAEILE 151 (598)
Q Consensus 109 ~l~~~~~~~----~~wve~r~~~r~l~h~a~~~~~f~~~~~~~~~~~ 151 (598)
||+.+|... .+---+|.|+.+|..++......+.+..-..+++
T Consensus 189 ~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp 235 (510)
T 3ul1_B 189 PLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILP 235 (510)
T ss_dssp HHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHH
T ss_pred HHHHHHHhccchhhhHHHHHHHHHHHHHHhhcccchhHHHHHHhHHH
Confidence 999999853 2233478899999999988776665543334443
No 257
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=89.16 E-value=0.11 Score=54.39 Aligned_cols=97 Identities=12% Similarity=0.080 Sum_probs=71.7
Q ss_pred hhhhhHhHhh---cCCCC-cccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCC
Q 007571 31 PISGLWNTAM---AHPND-PEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGV 106 (598)
Q Consensus 31 ~~~~~~~~~~---~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~ 106 (598)
+...|+|++. ..|+. ..+.+-|++.....|+.. .+.-+=-.|+-+|+..+....+.....+++|+
T Consensus 238 A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~-----------~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~ 306 (354)
T 3nmw_A 238 GGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKS-----------HSLTIVSNACGTLWNLSARNPKDQEALWDMGA 306 (354)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTC-----------SCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTH
T ss_pred HHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcC-----------CChHHHHHHHHHHHHHhCCCHHHHHHHHHCCC
Confidence 5666778876 23322 234556777766666543 23346678999999998877888888899999
Q ss_pred chHHHHHhcccchhhHHHHHHHHhhccccCCCc
Q 007571 107 IPPLVELLRGRLTWVEQRVAVRALGHLATYPST 139 (598)
Q Consensus 107 ~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~ 139 (598)
||||++||+.+-.-| ++.|+.||..|++....
T Consensus 307 i~~Lv~LL~s~~~~i-~~~A~~aL~nL~~~~~~ 338 (354)
T 3nmw_A 307 VSMLKNLIHSKHKMI-AMGSAAALRNLMANRPA 338 (354)
T ss_dssp HHHHHTTTTCSSHHH-HHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHhCCCHHH-HHHHHHHHHHHHcCCHH
Confidence 999999998775544 89999999999987554
No 258
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=88.99 E-value=0.74 Score=48.47 Aligned_cols=105 Identities=17% Similarity=0.148 Sum_probs=74.9
Q ss_pred hhhhhHhHhhcCC-CCcccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccH---HHHHHHHHhcCC
Q 007571 31 PISGLWNTAMAHP-NDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNM---EEFAESAVHAGV 106 (598)
Q Consensus 31 ~~~~~~~~~~~~p-~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~---~~~~~~av~~~~ 106 (598)
++..|+|++...| +=..+.+.|++..+..|+... +.+--+-..|+.++|..+.+. +......+..|+
T Consensus 286 a~~~L~~L~~~~~~~~~~~~~~~~v~~L~~ll~~~---------~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~ 356 (529)
T 1jdh_A 286 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA---------GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYG 356 (529)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHH---------TTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCHHHHHHHHHcCChHHHHHHHHcc---------CCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCC
Confidence 6677888876543 112344567777777776542 122345678999999887752 335556778999
Q ss_pred chHHHHHhcccchhhHHHHHHHHhhccccCCCchhhhh
Q 007571 107 IPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPTVA 144 (598)
Q Consensus 107 ~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~ 144 (598)
||+|+.+|+..-+|--++.|+.+|+.++.....-..+.
T Consensus 357 i~~L~~lL~~~~~~~v~~~a~~~l~nl~~~~~~~~~~~ 394 (529)
T 1jdh_A 357 LPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLR 394 (529)
T ss_dssp HHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHH
T ss_pred hhHHHHHhccccchHHHHHHHHHHHHHhcChhhhHHHH
Confidence 99999999988789999999999999998765544333
No 259
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=88.98 E-value=6.3 Score=42.67 Aligned_cols=98 Identities=7% Similarity=-0.149 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 390 VVKLEGNSLFSAGNISGAASKYSEALAL--CPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 390 ~lKeeGN~lfk~GdY~eAIe~YskALel--~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
.+...-+.+.+.|++++|.+.|.+..+. .|+ ...|+.+-.+|.+.|++++|...+.+..+..-.+ +...|
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~P--d~~ty 178 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR------LRSYGPALFGFCRKGDADKAYEVDAHMVESEVVP--EEPEL 178 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCC--CHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc------cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCC--CHHHH
Confidence 3555567788999999999999998875 354 6788889899999999999999999988754332 67889
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
.-+-.+|...|+.++|...|++.-+...
T Consensus 179 ~~Li~~~~~~g~~d~A~~ll~~Mr~~g~ 206 (501)
T 4g26_A 179 AALLKVSMDTKNADKVYKTLQRLRDLVR 206 (501)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999988876543
No 260
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=88.95 E-value=0.44 Score=48.97 Aligned_cols=67 Identities=19% Similarity=0.231 Sum_probs=58.3
Q ss_pred cccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccCC
Q 007571 71 LSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYP 137 (598)
Q Consensus 71 ~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 137 (598)
++++++.-|-..|+.++|...-...++....++.|+||+|+.+|...-++--++.|+++|++|+.+.
T Consensus 115 lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~ 181 (450)
T 2jdq_A 115 LLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGK 181 (450)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCS
T ss_pred HHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4556677888999999999988888888888899999999999996667888999999999999765
No 261
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=88.71 E-value=0.19 Score=54.63 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=69.7
Q ss_pred chhhhhHhHhhcC-CCCcccc-cccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccc---cHHHHHHHHHhc
Q 007571 30 LPISGLWNTAMAH-PNDPEFI-ELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTM---NMEEFAESAVHA 104 (598)
Q Consensus 30 ~~~~~~~~~~~~~-p~~~~~~-~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~---~~~~~~~~av~~ 104 (598)
-++..|||++... .+-+.+. .-|++.....|+..+- +..| +-|=-.|+-+|..-+. ...+.-+..+++
T Consensus 306 ~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~-~~~~------~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~ 378 (458)
T 3nmz_A 306 SVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRS-QTNT------LAIIESGGGILRNVSSLIATNEDHRQILREN 378 (458)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCC-SSST------THHHHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCC-Ccch------HHHHHHHHHHHHHHHhcccCCHHHHHHHHHc
Confidence 4778999999833 4446666 6799999988886432 1122 2233456666655544 455666777899
Q ss_pred CCchHHHHHhcccchhhHHHHHHHHhhccccCC
Q 007571 105 GVIPPLVELLRGRLTWVEQRVAVRALGHLATYP 137 (598)
Q Consensus 105 ~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 137 (598)
|+||+|++||+.. +---|+-|++||+.|++..
T Consensus 379 G~i~~Lv~LL~~~-~~~v~~~A~~aL~nLa~~~ 410 (458)
T 3nmz_A 379 NCLQTLLQHLKSH-SLTIVSNACGTLWNLSARN 410 (458)
T ss_dssp THHHHHHHHSSCS-CHHHHHHHHHHHHHHHSSC
T ss_pred ccHHHHHHHHcCC-ChHHHHHHHHHHHHHHcCC
Confidence 9999999999743 3336888999999998653
No 262
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=87.99 E-value=0.28 Score=52.40 Aligned_cols=61 Identities=26% Similarity=0.162 Sum_probs=47.9
Q ss_pred CccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccC
Q 007571 75 QNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATY 136 (598)
Q Consensus 75 ~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~ 136 (598)
.+.-+=..|+..|+..+.+.+..-..-+++|+||+|+++|+..-. --|+.|++||..|++.
T Consensus 14 ~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~-~~~~~A~~aL~nLa~~ 74 (457)
T 1xm9_A 14 QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQ-NVQQAAAGALRNLVFR 74 (457)
T ss_dssp SCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCH-HHHHHHHHHHHHHHSS
T ss_pred CCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCH-HHHHHHHHHHHHHhcC
Confidence 344566788988888776665555566799999999999986543 3489999999999985
No 263
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=86.56 E-value=0.52 Score=48.03 Aligned_cols=123 Identities=17% Similarity=0.194 Sum_probs=79.1
Q ss_pred CCchhhhhHHHHHhhh-CCCCCC--------CCCcchhhhhHhHhhcCCCCcccccccHHHHHHHHHHhhcCCccccccC
Q 007571 4 GNPSKRRASILKFFRE-LPSQDD--------DGQVLPISGLWNTAMAHPNDPEFIELGIFECMAALIWKGLKNRRWLSHD 74 (598)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~ 74 (598)
+|+..|...+...++. .|.... ++.+.++.-|-+..-..++=..|..+|.+. .|+. -|++.
T Consensus 24 ~d~~~~mk~~l~vl~~~~~~~~~~~~~~~~~e~k~~Al~~L~~lv~~~dna~~~~~~G~l~---~Lv~-------~lL~s 93 (296)
T 1xqr_A 24 RGEVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMH---LLVG-------RYLEA 93 (296)
T ss_dssp HHHHHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHH---HHHH-------TTTTC
T ss_pred CCHHHHHHHHHHHHhCCCcccccccccCCCHHHHHHHHHHHHHHHhChhhHHHHHHcCCHH---HHHH-------HHHcC
Confidence 3556666666666663 343211 112233333333332222223477888875 3443 23445
Q ss_pred CccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccC
Q 007571 75 QNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATY 136 (598)
Q Consensus 75 ~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~ 136 (598)
.+--|=-+|+-+||.-.-+..+.....|+.|+||||+.||+---.=--+|-|+.||+-|+..
T Consensus 94 ~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~ 155 (296)
T 1xqr_A 94 GAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVRE 155 (296)
T ss_dssp SSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcC
Confidence 67777789999999999898999999999999999999998321112378899999998753
No 264
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=86.27 E-value=7.4 Score=39.58 Aligned_cols=59 Identities=17% Similarity=0.100 Sum_probs=55.4
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 007571 396 NSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNP 459 (598)
Q Consensus 396 N~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~ 459 (598)
+.+++.|+.++|++.....|+..|.+ +.+..-+.+.+.-.|+|+.|...+..+.+++|.
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~d-----a~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~ 63 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKD-----ASLRSSFIELLCIDGDFERADEQLMQSIKLFPE 63 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcC-----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCch
Confidence 46789999999999999999999999 888888888899999999999999999999999
No 265
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=83.48 E-value=0.85 Score=48.01 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=75.5
Q ss_pred chhhhhHhHhhcCCCCcc-cccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 30 LPISGLWNTAMAHPNDPE-FIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 30 ~~~~~~~~~~~~~p~~~~-~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
.++..|+|++...++..+ +.+.|++.-+..++. +.+.-+=..++.+++..+...++....-++.|+||
T Consensus 120 ~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~-----------~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~ 188 (529)
T 1jdh_A 120 YAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLN-----------KTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 188 (529)
T ss_dssp HHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGG-----------CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHh-----------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHH
Confidence 588888998887655433 235677666655543 23444556677888888887788888888999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCCCchhhh
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYPSTFPTV 143 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~ 143 (598)
+|+.+|+..-..+-+..|.++|..|++++..=..+
T Consensus 189 ~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~ 223 (529)
T 1jdh_A 189 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAI 223 (529)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHH
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHhcCcccHHHH
Confidence 99999998777777778999999999876543333
No 266
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=83.19 E-value=5.6 Score=43.59 Aligned_cols=99 Identities=17% Similarity=0.066 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHH
Q 007571 389 LVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLW 468 (598)
Q Consensus 389 ~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyy 468 (598)
.-+...|...--...+..|...|.+|+.+.|.. ...|+-+|..+.-.++.-+|+-.|.++|....+ ++.|.-
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~-----G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~P---f~~a~~ 224 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSN-----GQPYNQLAILASSKGDHLTTIFYYCRSIAVKFP---FPAAST 224 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB-----SHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBC---CHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCC-----CchHHHHHHHHhcccccHHHHHHHHHHHhcCCC---ChhHHH
Confidence 346667777777788999999999999999999 899999999999999999999999999988777 888887
Q ss_pred HHHHHHHHhh----------cHHHHHHHHHHHHHHhc
Q 007571 469 RRAQAYDMLA----------LAKESLLDAILFINECS 495 (598)
Q Consensus 469 RRAqAy~~LG----------dy~EAl~d~~kALel~~ 495 (598)
++...+...- ..++-+..|.++...+-
T Consensus 225 nL~~~f~~~~~~~~~~~~~~~~~~~~~~Fv~lh~~lf 261 (497)
T 1ya0_A 225 NLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVY 261 (497)
T ss_dssp HHHHHHHHHTTSCCCCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhccccCChHHHHHHHHHHHHHHh
Confidence 7777766531 13444455555555444
No 267
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=83.12 E-value=3.4 Score=44.59 Aligned_cols=100 Identities=6% Similarity=-0.093 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHh---CCCC
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQ-PLAAISDATRALCL---HNPL 460 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgd-yeeAI~D~~kALeL---dP~~ 460 (598)
+..+....+.+-..|-.|+++.|...|.+|+...|. ..+|..-..--.+.++ .+.....|++|+.. +|.
T Consensus 11 i~~aR~vyer~l~~~P~~~~e~~~~iferal~~~ps------~~LW~~Y~~f~~~~~~~~~~i~~~fe~al~~vg~d~~- 83 (493)
T 2uy1_A 11 LSSPSAIMEHARRLYMSKDYRSLESLFGRCLKKSYN------LDLWMLYIEYVRKVSQKKFKLYEVYEFTLGQFENYWD- 83 (493)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCCC------HHHHHHHHHHHHHHC----CTHHHHHHHHHHSTTCTT-
T ss_pred hHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhccCCC------HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHcCCCcc-
Confidence 557888999999999999999999999999999994 5666666555555553 34566677888864 777
Q ss_pred CcCHHHHHHHHHHHH----HhhcHHHHHHHHHHHHHH
Q 007571 461 NRHAKSLWRRAQAYD----MLALAKESLLDAILFINE 493 (598)
Q Consensus 461 ~~~~KAyyRRAqAy~----~LGdy~EAl~d~~kALel 493 (598)
+...+....+-+. ..++.+.+...|++||..
T Consensus 84 --s~~iW~~Yi~f~~~~~~~~~~~~~vR~iy~rAL~~ 118 (493)
T 2uy1_A 84 --SYGLYKEYIEEEGKIEDEQTRIEKIRNGYMRALQT 118 (493)
T ss_dssp --CHHHHHHHHHHTSSCSSHHHHHHHHHHHHHHHHTS
T ss_pred --cHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHhC
Confidence 7777776666543 357888999999999984
No 268
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=81.91 E-value=0.095 Score=49.49 Aligned_cols=55 Identities=16% Similarity=0.039 Sum_probs=45.0
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHHHHhHhhHHhhcCChHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELLNSRQRLKWEKNMLKEDLHI 383 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl~~kek~k~e~~ms~eElee 383 (598)
..|++||+..+.|.|+++||..+. .||+++++.|.++++.+++ ..+.++.+|+.+
T Consensus 99 ~gMk~Ge~~~~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~---~~~~~~~~e~~~ 155 (167)
T 1jvw_A 99 QLMREGDRWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKD---GGKGRTAEEVDE 155 (167)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGG---GCCSCBHHHHHH
T ss_pred cCCCCCCEEEEEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEc---CCCCCCHHHHHH
Confidence 469999999999999999999886 6999999999999998753 234566666643
No 269
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=81.72 E-value=18 Score=38.91 Aligned_cols=102 Identities=10% Similarity=-0.129 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCch-----------------------------------HHHHHHHHHHH
Q 007571 390 VVKLEGNSLFSAGNISGAASKYSEALALCPMRSK-----------------------------------KERVVLYSNRA 434 (598)
Q Consensus 390 ~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~-----------------------------------~~~a~ly~NRA 434 (598)
.+...+.-+...|+.+.|...|.+|+.. |.+.. .....+|.+-+
T Consensus 215 lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~ 293 (493)
T 2uy1_A 215 VYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHL 293 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHH
Confidence 3555566667788889999999999988 87521 00113444444
Q ss_pred HHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhh-cHHHHHHHHHHHHHHhcc
Q 007571 435 QCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLA-LAKESLLDAILFINECSQ 496 (598)
Q Consensus 435 ~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LG-dy~EAl~d~~kALel~~k 496 (598)
....+.++.+.|...+.+| . .|.. ....|...|..-...+ +++.|...|+.+++.+++
T Consensus 294 ~~~~r~~~~~~AR~i~~~A-~-~~~~--~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~ 352 (493)
T 2uy1_A 294 NYVLKKRGLELFRKLFIEL-G-NEGV--GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPD 352 (493)
T ss_dssp HHHHHHHCHHHHHHHHHHH-T-TSCC--CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTT
T ss_pred HHHHHcCCHHHHHHHHHHh-h-CCCC--ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCC
Confidence 5555677889999999999 4 3432 5677777777777777 599999999999998875
No 270
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=80.85 E-value=20 Score=34.60 Aligned_cols=92 Identities=10% Similarity=0.006 Sum_probs=65.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH--HhC--CCC--------
Q 007571 393 LEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRAL--CLH--NPL-------- 460 (598)
Q Consensus 393 eeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kAL--eLd--P~~-------- 460 (598)
-.+-.+|-.|+|..|+-... -..+ ++...-.+.||.++++|..|+...+..| .++ |+.
T Consensus 38 L~~I~LyyngEY~R~Lf~L~----~lNT------~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ff 107 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLH----KLNT------CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMF 107 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHH----TCCB------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTS
T ss_pred hhhhhhhhcchHhHHHHHHH----hcch------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceee
Confidence 35667888899888876642 1222 4445558999999999999999999999 333 331
Q ss_pred -CcCHHH--HHHHHHHHHHhhcHHHHHHHHHHHHHHh
Q 007571 461 -NRHAKS--LWRRAQAYDMLALAKESLLDAILFINEC 494 (598)
Q Consensus 461 -~~~~KA--yyRRAqAy~~LGdy~EAl~d~~kALel~ 494 (598)
++-.|- +.-.|..+.++|+-+||+..|.......
T Consensus 108 vd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~ 144 (242)
T 3kae_A 108 VDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKS 144 (242)
T ss_dssp CCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred eccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCc
Confidence 011122 3346899999999999999998876554
No 271
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=80.83 E-value=0.71 Score=53.64 Aligned_cols=98 Identities=11% Similarity=0.103 Sum_probs=68.9
Q ss_pred chhhhhHhHhhcCCCCccccc---ccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCC
Q 007571 30 LPISGLWNTAMAHPNDPEFIE---LGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGV 106 (598)
Q Consensus 30 ~~~~~~~~~~~~~p~~~~~~~---lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~ 106 (598)
.+...|.|++.+...++-|+. .|++.....|+. ++.+...-+.|+-.++..+-..++.....|++|+
T Consensus 555 ~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~----------~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~ 624 (810)
T 3now_A 555 HATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQ----------QDCTALENFESLMALTNLASMNESVRQRIIKEQG 624 (810)
T ss_dssp HHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTS----------TTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTH
T ss_pred HHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhC----------CCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCC
Confidence 466778888876433344432 444444444442 2234454567788888877777889999999999
Q ss_pred chHHHHHhcccchhhHHHHHHHHhhccccCCC
Q 007571 107 IPPLVELLRGRLTWVEQRVAVRALGHLATYPS 138 (598)
Q Consensus 107 ~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~ 138 (598)
||+|++||...=.= =|+.|+++|+.|++++.
T Consensus 625 l~~Lv~LL~s~~~~-Vq~~A~~~L~NLa~~~~ 655 (810)
T 3now_A 625 VSKIEYYLMEDHLY-LTRAAAQCLCNLVMSED 655 (810)
T ss_dssp HHHHHHHHHSCCTT-HHHHHHHHHHHHTTSHH
T ss_pred HHHHHHHHcCCCHH-HHHHHHHHHHHHhCChH
Confidence 99999999876433 38999999999998653
No 272
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=80.79 E-value=1.2 Score=44.15 Aligned_cols=64 Identities=23% Similarity=0.103 Sum_probs=43.2
Q ss_pred hhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccCC-Cchhhhhhh
Q 007571 82 YAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYP-STFPTVASH 146 (598)
Q Consensus 82 y~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~-~~f~~~~~~ 146 (598)
.||-.|..-+.+..+--..-+++|+||||++||+-. +=.-|+.|+.||..|++.. ..=.+|.++
T Consensus 29 ~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~-~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~ 93 (233)
T 3tt9_A 29 AAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQ-NEDVQRAVCGALRNLVFEDNDNKLEVAEL 93 (233)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCC-CHHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCC-CHHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence 355555554544444444556899999999999864 4456999999999999843 223445443
No 273
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=79.29 E-value=0.052 Score=49.67 Aligned_cols=41 Identities=20% Similarity=0.035 Sum_probs=35.0
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELLNS 366 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl~~ 366 (598)
..|++||+..+.|.|.++||..|. .||+++++.|.++++++
T Consensus 99 ~gm~~Ge~~~v~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~i 141 (144)
T 3o5e_A 99 ATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 141 (144)
T ss_dssp TTCCBTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred hCCCCCCEEEEEEChHHCcCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 459999999999999999999887 79999988877666543
No 274
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=77.68 E-value=12 Score=40.49 Aligned_cols=85 Identities=9% Similarity=0.033 Sum_probs=69.7
Q ss_pred CCHHHHHHHHHHHHHh--CCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhc
Q 007571 402 GNISGAASKYSEALAL--CPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLAL 479 (598)
Q Consensus 402 GdY~eAIe~YskALel--~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGd 479 (598)
+..+.|.+.|.+.... .|+ ...|+.+-.+|.+.|++++|+..+.+..+..-.+ +...|.-+-.+|...|+
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~P--d~~tyn~lI~~~~~~g~ 155 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPN------EATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQP--RLRSYGPALFGFCRKGD 155 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC--ccceehHHHHHHHHCCC
Confidence 3467788888877764 354 6889999999999999999999999987653222 67888899999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 007571 480 AKESLLDAILFINEC 494 (598)
Q Consensus 480 y~EAl~d~~kALel~ 494 (598)
.++|...|....+.-
T Consensus 156 ~~~A~~l~~~M~~~G 170 (501)
T 4g26_A 156 ADKAYEVDAHMVESE 170 (501)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999887653
No 275
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=77.38 E-value=4.9 Score=33.43 Aligned_cols=33 Identities=15% Similarity=0.188 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALAL 417 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel 417 (598)
...|..+..+|...=+.|+|.+|+.+|.+||+.
T Consensus 8 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 8 EDMARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 457888888999999999999999999998875
No 276
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=77.19 E-value=0.059 Score=51.36 Aligned_cols=56 Identities=13% Similarity=0.015 Sum_probs=38.7
Q ss_pred ccCCccceehhhccccccccCCCC----CCCCccHHHHHHHHHHHhHhh--HHhhcCChHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR----SSPSNRSKEQIEELLNSRQRL--KWEKNMLKEDL 381 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~----~ip~~~tl~~~~ELl~~kek~--k~e~~ms~eEl 381 (598)
..|++||+..+.+.|+++||..+. .||+++++.|.++++.+.... +..|.|+.+|+
T Consensus 114 ~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eEr 175 (180)
T 2f4e_A 114 ASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEER 175 (180)
T ss_dssp TTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCCC-----------
T ss_pred hCCCCCCEEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCccccccccCCHHHH
Confidence 459999999999999999998873 689999999999999876432 23578887653
No 277
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=76.74 E-value=1.7 Score=47.92 Aligned_cols=105 Identities=18% Similarity=0.137 Sum_probs=73.9
Q ss_pred chhhhhHhHhhcCCCCc-ccccccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 30 LPISGLWNTAMAHPNDP-EFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 30 ~~~~~~~~~~~~~p~~~-~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
.++..|+|++...++.- .+...|++.-+..++.. .|.-+-..++.+++..+....+....-++.|+||
T Consensus 117 ~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~-----------~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~ 185 (644)
T 2z6h_A 117 YAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK-----------TNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 185 (644)
T ss_dssp HHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGC-----------CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCc-----------CCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChH
Confidence 47888888887753322 23456777766665533 2334555667778877776677777888999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCCCchhhhhh
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYPSTFPTVAS 145 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~~ 145 (598)
+|+.+|+..-.-.-++.|+++|..|+.+...-..+..
T Consensus 186 ~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~ 222 (644)
T 2z6h_A 186 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVE 222 (644)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHhcCcccHHHHHH
Confidence 9999999765544566899999999987665444443
No 278
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=76.20 E-value=3.6 Score=46.03 Aligned_cols=63 Identities=17% Similarity=0.011 Sum_probs=48.9
Q ss_pred CCccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccCC
Q 007571 74 DQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYP 137 (598)
Q Consensus 74 ~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 137 (598)
..+.-+=..||-.|..-+...++.-..-+++|+||||++||+-. +=.=|+.|+.||+.||+++
T Consensus 59 s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~-~~~vq~~Aa~AL~nLa~~~ 121 (584)
T 3l6x_A 59 FRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHP-KKEVHLGACGALKNISFGR 121 (584)
T ss_dssp CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCS-SHHHHHHHHHHHHHHTSSS
T ss_pred CCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCC-CHHHHHHHHHHHHHHHccC
Confidence 34455556777777766666666667778999999999999865 4456899999999999974
No 279
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=75.97 E-value=1.7 Score=49.67 Aligned_cols=106 Identities=18% Similarity=0.130 Sum_probs=79.6
Q ss_pred chhhhhHhHhhcCCCCcccc-cccHHHHHHHHHHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCch
Q 007571 30 LPISGLWNTAMAHPNDPEFI-ELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIP 108 (598)
Q Consensus 30 ~~~~~~~~~~~~~p~~~~~~-~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 108 (598)
.++..|+|++...++.-... +.|++..+..|+.. .|.-+=..|+.++...+...++.....+..|.||
T Consensus 253 ~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~-----------~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~ 321 (780)
T 2z6g_A 253 HAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK-----------TNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 321 (780)
T ss_dssp HHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGC-----------CCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHH
T ss_pred HHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhc-----------CCHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHH
Confidence 58888999998876655544 57888877776643 3444556677777777766677777778999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhccccCCCchhhhhhh
Q 007571 109 PLVELLRGRLTWVEQRVAVRALGHLATYPSTFPTVASH 146 (598)
Q Consensus 109 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~~~ 146 (598)
+|+.+|+..-.-+-+..|+++|..|+.....++.|...
T Consensus 322 ~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~ 359 (780)
T 2z6g_A 322 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEA 359 (780)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHTSTTHHHHHHHT
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhcChHHHHHHHHh
Confidence 99999997755555667899999999988888777644
No 280
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=75.15 E-value=16 Score=37.17 Aligned_cols=59 Identities=10% Similarity=-0.144 Sum_probs=54.9
Q ss_pred HHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 435 QCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 435 ~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
...++.++.++|++.+...++-+|. +.+.-.-+-+.+.-.|+++.|...++.+.++.|.
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~---da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~ 63 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPK---DASLRSSFIELLCIDGDFERADEQLMQSIKLFPE 63 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCc---CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCch
Confidence 3567889999999999999999999 9999999999999999999999999999999875
No 281
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=72.44 E-value=17 Score=37.85 Aligned_cols=62 Identities=15% Similarity=0.154 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRAL 454 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kAL 454 (598)
...+...+..+...|++.+|+....+++..+|.+ -.+|.-+-.+|...|+..+|+..|.++-
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~-----E~~~~~lm~al~~~Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFEHPYR-----EPLWTQLITAYYLSDRQSDALGAYRRVK 232 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3345566777889999999999999999999998 6788888999999999999999888764
No 282
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=72.36 E-value=6.5 Score=32.81 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007571 384 KQAAALVVKLEGNSLFSAGNISGAASKYSEALAL 417 (598)
Q Consensus 384 ~~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel 417 (598)
.+..|..+..+|...=+.|+|++|+.+|.+||+.
T Consensus 15 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 15 LEEMARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3678888999999999999999999999999875
No 283
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=72.10 E-value=37 Score=36.03 Aligned_cols=68 Identities=9% Similarity=-0.057 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHh----CCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 427 VVLYSNRAQCHLLMQQPLAAISDATRALCL----HNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 427 a~ly~NRA~cylKLgdyeeAI~D~~kALeL----dP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
..+-.++|..|+..|+|.+|+..+++.++- |.. ..-...|.-..+.|..++++..+...+.++.....
T Consensus 99 ~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~-~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ 170 (394)
T 3txn_A 99 QSLEARLIALYFDTALYTEALALGAQLLRELKKLDDK-NLLVEVQLLESKTYHALSNLPKARAALTSARTTAN 170 (394)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCT-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccc-hhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhc
Confidence 445568999999999999999999888752 211 12457788889999999999999999999987764
No 284
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=71.02 E-value=0.12 Score=45.74 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=35.3
Q ss_pred ccCCccceehhhccccccccCCCC-CCCCccHHHHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR-SSPSNRSKEQIEELLNS 366 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~-~ip~~~tl~~~~ELl~~ 366 (598)
..|++||+..+.+.|+++||..+. .||+++++.|.++++++
T Consensus 80 ~gm~~Ge~~~~~ip~~~aYG~~g~~~Ip~~~~l~f~vel~~i 121 (125)
T 4dip_A 80 KGMCVGEKRKLIIPPALGYGKEGKGKIPPESTLIFNIDLLEI 121 (125)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBTTBCTTCCEEEEEEEEEE
T ss_pred hCCCCCCEEEEEEChHHhcCCCCCCCCCCCCeEEEEEEEEEE
Confidence 469999999999999999999887 89999988877766553
No 285
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=69.57 E-value=14 Score=44.11 Aligned_cols=97 Identities=5% Similarity=-0.082 Sum_probs=71.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------------------chHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 007571 392 KLEGNSLFSAGNISGAASKYSEALALCPMR------------------SKKERVVLYSNRAQCHLLMQQPLAAISDATRA 453 (598)
Q Consensus 392 KeeGN~lfk~GdY~eAIe~YskALel~P~~------------------~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kA 453 (598)
.-.|..++..|+|++|..+|.+|-.-.... .....+..|......+.+.+.++.+++.+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 568999999999999999999874321110 00113467788888888999999999999999
Q ss_pred HHhCCCCCcCH--HHHHHHHHHHHHhhcHHHHHHHHH
Q 007571 454 LCLHNPLNRHA--KSLWRRAQAYDMLALAKESLLDAI 488 (598)
Q Consensus 454 LeLdP~~~~~~--KAyyRRAqAy~~LGdy~EAl~d~~ 488 (598)
|+..+....+. ..|.+.=+++..+|+|++|...+.
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 98765421122 256777889999999999966553
No 286
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=69.27 E-value=18 Score=29.64 Aligned_cols=37 Identities=22% Similarity=0.314 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR 421 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~ 421 (598)
..--..-...|..+...|++++|+.++.+||..+|..
T Consensus 14 e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 14 QKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 3445556778999999999999999999999999986
No 287
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=69.22 E-value=0.12 Score=46.59 Aligned_cols=40 Identities=15% Similarity=0.000 Sum_probs=33.2
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELLN 365 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl~ 365 (598)
..|++||+..+.+.|+++||..+. .||+++++.|.++++.
T Consensus 90 ~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~ 131 (134)
T 3b7x_A 90 LSMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLD 131 (134)
T ss_dssp HTCEETCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEE
T ss_pred hCCCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEE
Confidence 359999999999999999998876 5899988877665544
No 288
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=69.12 E-value=0.15 Score=43.43 Aligned_cols=42 Identities=14% Similarity=-0.024 Sum_probs=35.8
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHHHHh
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELLNSR 367 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl~~k 367 (598)
..|++||+..+.+.|+++||..+. .||+++++.|.++++.++
T Consensus 54 ~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 97 (102)
T 2pbc_A 54 LGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIE 97 (102)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEG
T ss_pred hCCCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEec
Confidence 459999999999999999998876 688999988887777654
No 289
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=69.02 E-value=0.14 Score=44.73 Aligned_cols=39 Identities=13% Similarity=-0.028 Sum_probs=32.8
Q ss_pred ccCCccceehhhccccccccCCCC---CCCCccHHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR---SSPSNRSKEQIEELL 364 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~---~ip~~~tl~~~~ELl 364 (598)
..|++||+..+.+.|+++||..|. .||+++++.|.++++
T Consensus 75 ~gm~~Ge~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~ 116 (119)
T 3kz7_A 75 LTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELV 116 (119)
T ss_dssp TTCCTTCEEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEE
T ss_pred hCCCCCCEEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEE
Confidence 359999999999999999999886 699998877665543
No 290
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=68.97 E-value=20 Score=39.26 Aligned_cols=55 Identities=13% Similarity=-0.040 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHH--------HhCCCCCcCHHHHHHHHHHHHHhhcHHHHH
Q 007571 427 VVLYSNRAQCHLLMQQPLAAISDATRAL--------CLHNPLNRHAKSLWRRAQAYDMLALAKESL 484 (598)
Q Consensus 427 a~ly~NRA~cylKLgdyeeAI~D~~kAL--------eLdP~~~~~~KAyyRRAqAy~~LGdy~EAl 484 (598)
...|.++|..+++.++++.|+..|.++= ..... +.+.+-+++......|++..|.
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~---~~~~~~~~~~~a~~~~~~~~A~ 743 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFN---NKEGLVTLAKDAETTGKFNLAF 743 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTT---CHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcC---CHHHHHHHHHHHHHcCchHHHH
Confidence 6789999999999999999999888752 11233 4444445554444444444444
No 291
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=68.94 E-value=0.14 Score=45.62 Aligned_cols=41 Identities=20% Similarity=0.035 Sum_probs=34.5
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELLNS 366 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl~~ 366 (598)
..|++||+..+.+.|.++||..|. .||+++++.|.++++.+
T Consensus 83 ~gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i 125 (128)
T 3o5q_A 83 ATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 125 (128)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred hcCCCCCEEEEEEChHHcCCCCCCCCCcCCCCEEEEEEEEEEe
Confidence 459999999999999999999886 78999888776665543
No 292
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=68.63 E-value=54 Score=35.87 Aligned_cols=81 Identities=12% Similarity=-0.027 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
...++..|..+.+.|+++.|+.+|.++=. +..+..+|...++.+........+.. ... +
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~~d-------------~~~l~~l~~~~~~~~~~~~~~~~a~~-~~~---~---- 739 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNAHD-------------LESLFLLHSSFNNKEGLVTLAKDAET-TGK---F---- 739 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTC-------------HHHHHHHHHHTTCHHHHHHHHHHHHH-TTC---H----
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHccC-------------hhhhHHHHHHcCCHHHHHHHHHHHHH-cCc---h----
Confidence 34578899999999999999999987632 22233444445665554444433333 222 1
Q ss_pred HHHHHHHHHhhcHHHHHHHHHH
Q 007571 468 WRRAQAYDMLALAKESLLDAIL 489 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~k 489 (598)
.....+++.+|++++|++.|.+
T Consensus 740 ~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 740 NLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHH
Confidence 1122356666777777665543
No 293
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=68.61 E-value=14 Score=40.45 Aligned_cols=63 Identities=11% Similarity=-0.139 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHH
Q 007571 427 VVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFIN 492 (598)
Q Consensus 427 a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALe 492 (598)
..++.++|....-...+..|...|.+|+.+.|+ +..+|..+|......|+.-+|+-.|.+++-
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~---~G~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS---NGQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---BSHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCC---CCchHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 346677788777778899999999999999999 999999999999999999999888888764
No 294
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=67.83 E-value=2.6 Score=48.93 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=45.1
Q ss_pred hhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccCCC
Q 007571 79 IPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPS 138 (598)
Q Consensus 79 ~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~ 138 (598)
|---|+-+||.-+.+ ++.-..-+++|+||||+.||+-.-. .=|+.|++||++|+.+..
T Consensus 511 vqe~Aa~aL~NLA~d-~~~r~~Vv~~Gaip~Lv~LL~s~~~-~~k~~Aa~AL~nL~~~~~ 568 (810)
T 3now_A 511 SQELIARVLNAVCGL-KELRGKVVQEGGVKALLRMALEGTE-KGKRHATQALARIGITIN 568 (810)
T ss_dssp HHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHHHHSSCH-HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHccCCH-HHHHHHHHHHHHHhcCCC
Confidence 344578888888865 4577788899999999999975433 348999999999987643
No 295
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=67.74 E-value=0.27 Score=51.25 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=37.2
Q ss_pred ccCCccceehhhccccccccCCCC-------CCCCccHHHHHHHHHHHh
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR-------SSPSNRSKEQIEELLNSR 367 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~-------~ip~~~tl~~~~ELl~~k 367 (598)
..|++||++.+++.|+|+||..|. .||+++++.+.+++++++
T Consensus 187 ~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~ 235 (356)
T 3jxv_A 187 KTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWK 235 (356)
T ss_dssp TTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEE
T ss_pred hhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEe
Confidence 459999999999999999998876 389999999999988875
No 296
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=66.93 E-value=0.13 Score=45.80 Aligned_cols=41 Identities=15% Similarity=0.026 Sum_probs=34.6
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELLNS 366 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl~~ 366 (598)
..|++||+..+.+.|+++||..+. .||+++++.|.++++++
T Consensus 83 ~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v 125 (129)
T 2vn1_A 83 SSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSF 125 (129)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred hCCCCCCEEEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEE
Confidence 459999999999999999998876 68999988877766554
No 297
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=66.25 E-value=0.15 Score=44.68 Aligned_cols=39 Identities=10% Similarity=-0.020 Sum_probs=32.0
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELL 364 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl 364 (598)
..|++||+..+.+.|+++||..+. .||+++++.|.++++
T Consensus 74 ~gm~~Ge~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~ 114 (118)
T 2awg_A 74 PLMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTLK 114 (118)
T ss_dssp GGSCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEE
T ss_pred hCCCCCCEEEEEEChHHccCCCCCCCccCCCCeEEEEEEEE
Confidence 459999999999999999998885 688888876655543
No 298
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=64.43 E-value=0.19 Score=43.58 Aligned_cols=38 Identities=13% Similarity=-0.022 Sum_probs=31.4
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEEL 363 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~EL 363 (598)
..|++||+..+.+.|+++||..+. .||+++++.|.+++
T Consensus 70 ~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~~~~l~f~vel 109 (113)
T 1yat_A 70 PKLSVGEKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVEL 109 (113)
T ss_dssp GGCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEE
T ss_pred hCCCCCCEEEEEECHHHCcCCCCCCCCcCCCCeEEEEEEE
Confidence 459999999999999999998875 58888877665544
No 299
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=64.34 E-value=0.26 Score=46.09 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=35.5
Q ss_pred ccCCccceehhhccccccccCCC-C--CCCCccHHHHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTV-R--SSPSNRSKEQIEELLNS 366 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g-~--~ip~~~tl~~~~ELl~~ 366 (598)
..|++||+..+.+.|+++||..+ . .||+++++.|.++++++
T Consensus 104 ~gMk~Ge~~~v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i 147 (157)
T 2jwx_A 104 PLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTA 147 (157)
T ss_dssp TTSCTTCEEEEEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEE
T ss_pred cCCCCCCEEEEEECchhcCCcccccCCCcCCCCeEEEEEEEEEE
Confidence 45999999999999999999988 4 69999998888777654
No 300
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=64.03 E-value=0.19 Score=42.99 Aligned_cols=38 Identities=13% Similarity=0.024 Sum_probs=31.2
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEEL 363 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~EL 363 (598)
..|++||+..+.+.|+++||..+. .||+++++.|.+++
T Consensus 64 ~gm~~Ge~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l 103 (107)
T 2ppn_A 64 AQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVEL 103 (107)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEE
T ss_pred hCCCCCCEEEEEECHHHccCCCCCCCCcCCCCeEEEEEEE
Confidence 459999999999999999998875 68888877665443
No 301
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=63.98 E-value=0.22 Score=49.15 Aligned_cols=41 Identities=10% Similarity=-0.118 Sum_probs=35.1
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELLNS 366 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl~~ 366 (598)
..|++|++..+.|.|+++||..|. .|||++++.|.++++++
T Consensus 175 ~gMk~Gek~~v~IPp~lAYG~~g~~~~IPpnstLvFeVeLl~I 217 (219)
T 3oe2_A 175 QNMPTGAKWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAV 217 (219)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred hCCCCCCEEEEEECchhcCCCCCCCCCCCCCCeEEEEEEEEEE
Confidence 469999999999999999999987 59999998887766543
No 302
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=63.09 E-value=1.5 Score=45.58 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=0.5
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHHHHh
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELLNSR 367 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl~~k 367 (598)
..|++||+..+.+.|+++||..|. .||+++++.|.++++++.
T Consensus 75 ~gm~~Ge~~~~~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~ 118 (356)
T 3jxv_A 75 KTMKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWT 118 (356)
T ss_dssp -------------------------------------------C
T ss_pred hcCCCCCEEEEEEChHHhCCCCCCCCCcCCCCEEEEEeeEEeee
Confidence 459999999999999999999887 799999999999999975
No 303
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=62.98 E-value=11 Score=31.50 Aligned_cols=32 Identities=28% Similarity=0.204 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALAL 417 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel 417 (598)
..+..+..++-..=+.|+|++|+.+|..||++
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 35777888888889999999999999998875
No 304
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=61.68 E-value=0.26 Score=44.49 Aligned_cols=38 Identities=16% Similarity=0.041 Sum_probs=31.7
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEEL 363 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~EL 363 (598)
..|++||+..+.+.|+++||..+. .||+++++.|.+++
T Consensus 91 ~gmk~Ge~~~v~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL 130 (133)
T 2y78_A 91 QGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVEL 130 (133)
T ss_dssp TTCBTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEE
T ss_pred cCCCCCCEEEEEECcHHhCCCCCCCCCCCCCCeEEEEEEE
Confidence 469999999999999999998886 58998887665443
No 305
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=61.61 E-value=13 Score=30.75 Aligned_cols=33 Identities=15% Similarity=0.122 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALAL 417 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel 417 (598)
+..|..+..+|...=+.|+|++|+.+|..|+++
T Consensus 10 l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 456777888888888999999999999998875
No 306
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=61.35 E-value=26 Score=30.09 Aligned_cols=37 Identities=27% Similarity=0.328 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR 421 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~ 421 (598)
.+.+..+..+|..+|+.++|.+|+..+.++..+..+.
T Consensus 50 e~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~ 86 (106)
T 2vkj_A 50 EKKARSLIAEGKDLFETANYGEALVFFEKALNLSDNE 86 (106)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred hhHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCH
Confidence 4678899999999999999999999999999876654
No 307
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=60.48 E-value=13 Score=31.46 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALAL 417 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel 417 (598)
+..|..+..+|...=+.|+|++|+.+|..||++
T Consensus 12 l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 346777888888888899999999999888865
No 308
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=60.37 E-value=1e+02 Score=37.07 Aligned_cols=99 Identities=6% Similarity=-0.265 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcC
Q 007571 389 LVVKLEGNSLFSAGNISGAASKYSEALA-----LCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRH 463 (598)
Q Consensus 389 ~~lKeeGN~lfk~GdY~eAIe~YskALe-----l~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~ 463 (598)
..+...-+.+.+.|+.++|...+.+.-+ ..|+ ...|+-+-..|.+.|++++|+..+++..+..-.+ +
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd------vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P--D 199 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT------LDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP--D 199 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC--C
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC------HhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC--c
Confidence 3466677789999999999999976432 3565 7899999999999999999999999987654322 6
Q ss_pred HHHHHHHHHHHHHhhc-HHHHHHHHHHHHHHhc
Q 007571 464 AKSLWRRAQAYDMLAL-AKESLLDAILFINECS 495 (598)
Q Consensus 464 ~KAyyRRAqAy~~LGd-y~EAl~d~~kALel~~ 495 (598)
.-.|.-+-.++...|+ .++|...|.+..+.-.
T Consensus 200 vvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~ 232 (1134)
T 3spa_A 200 LLSYAAALQCMGRQDQDAGTIERCLEQMSQEGL 232 (1134)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Confidence 7888888889999998 4788888888876643
No 309
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=58.96 E-value=0.35 Score=43.44 Aligned_cols=37 Identities=11% Similarity=0.017 Sum_probs=30.9
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEE 362 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~E 362 (598)
..|++||+..+.+.|+++||..+. .||+++++.|.++
T Consensus 88 ~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~Ve 126 (130)
T 2lgo_A 88 ATMTLGEKALFTIPYQLAYGERGYPPVIPPKATLVFEVE 126 (130)
T ss_dssp HHSCTTEEEEEEECTTTSTTTTCCSTTSCSSCCEEEEEE
T ss_pred hCCCCCCEEEEEECcHHHCCCCCCCCCcCCCCeEEEEEE
Confidence 359999999999999999998876 5889887765544
No 310
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=57.69 E-value=0.36 Score=47.03 Aligned_cols=38 Identities=16% Similarity=0.041 Sum_probs=32.1
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEEL 363 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~EL 363 (598)
..|++||+..+.+.|+++||..|. .||+++++.|.+++
T Consensus 167 ~gM~~Ge~~~v~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL 206 (209)
T 3uf8_A 167 QGMKVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVEL 206 (209)
T ss_dssp TTCBTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEE
T ss_pred hCCCCCCEEEEEECcHHhCCCCCCCCCcCCCCeEEEEEEE
Confidence 459999999999999999999887 58999887665543
No 311
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.60 E-value=0.15 Score=46.10 Aligned_cols=42 Identities=10% Similarity=-0.022 Sum_probs=36.8
Q ss_pred ccCCccceehhhccccccccCCC-C--CCCCccHHHHHHHHHHHh
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTV-R--SSPSNRSKEQIEELLNSR 367 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g-~--~ip~~~tl~~~~ELl~~k 367 (598)
..|++||+..+.+.|+++||..+ . .||+++++.|.++++.++
T Consensus 78 ~gm~~Ge~~~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~ 122 (135)
T 2d9f_A 78 PLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAV 122 (135)
T ss_dssp GGSCTTCEEEEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEE
T ss_pred hCCCCCCEEEEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEee
Confidence 46999999999999999999887 4 689999999888887765
No 312
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=57.53 E-value=15 Score=32.62 Aligned_cols=33 Identities=21% Similarity=0.174 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALAL 417 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel 417 (598)
+..|..+..+|...=+.|+|++|+.+|..|+++
T Consensus 15 l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 346666777777777888888888888877763
No 313
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=57.16 E-value=66 Score=30.47 Aligned_cols=81 Identities=11% Similarity=-0.113 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHH
Q 007571 388 ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSL 467 (598)
Q Consensus 388 A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAy 467 (598)
...++..|.....+|+++-|..+|.++=. +..+...|.-.|+-+.-....+.|..-. + +
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D-------------~~~L~~Ly~~tg~~e~L~kla~iA~~~g-~-------~ 92 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQHS-------------FDKLSFLYLVTGDVNKLSKMQNIAQTRE-D-------F 92 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTC-------------HHHHHHHHHHHTCHHHHHHHHHHHHHTT-C-------H
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhCC-------------HHHHHHHHHHhCCHHHHHHHHHHHHHCc-c-------H
Confidence 45699999999999999999999987643 2224445555666555444444443222 2 1
Q ss_pred HHHHHHHHHhhcHHHHHHHHHH
Q 007571 468 WRRAQAYDMLALAKESLLDAIL 489 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~k 489 (598)
.-...+++.+|++++++..|.+
T Consensus 93 n~af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 93 GSMLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHH
Confidence 2234677788888888766543
No 314
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=56.60 E-value=16 Score=38.70 Aligned_cols=72 Identities=6% Similarity=-0.152 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 427 VVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 427 a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
..++..+|.-|++.|++++|++.+.++...-.....-...++...+++...+++..+...+.++-.......
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~ 202 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGG 202 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCC
Confidence 456778999999999999999999999876444222568899999999999999999999999988876644
No 315
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=55.66 E-value=0.33 Score=43.76 Aligned_cols=42 Identities=10% Similarity=-0.020 Sum_probs=36.7
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHHHHh
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELLNSR 367 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl~~k 367 (598)
..|++||+..+.+.|+++||..+. .||+++++.|.+++..++
T Consensus 78 ~gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~ 121 (135)
T 1r9h_A 78 ATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWS 121 (135)
T ss_dssp TTCCBTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred hcCCCCCEEEEEEChHHcCCCCCCCCCcCcCCcEEEEEEEEEee
Confidence 459999999999999999998775 789999999888887764
No 316
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=54.95 E-value=56 Score=33.85 Aligned_cols=102 Identities=15% Similarity=0.072 Sum_probs=60.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---chHHHHHH--HHHHHHH-----HHHc--CChH-HHHHHHHHHHH--
Q 007571 391 VKLEGNSLFSAGNISGAASKYSEALALCPMR---SKKERVVL--YSNRAQC-----HLLM--QQPL-AAISDATRALC-- 455 (598)
Q Consensus 391 lKeeGN~lfk~GdY~eAIe~YskALel~P~~---~~~~~a~l--y~NRA~c-----ylKL--gdye-eAI~D~~kALe-- 455 (598)
..+.|-.+|+.|+|.+|+..|...|...|-. .+++...+ +...+.= .+.+ ++.. ....+-.+.++
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 3467999999999999999999999887532 12111111 2222221 1222 1110 00123334443
Q ss_pred -------hCCCCCcCHHHHHHHHH-HHHHhhcHHHHHHHHHHHHHHhc
Q 007571 456 -------LHNPLNRHAKSLWRRAQ-AYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 456 -------LdP~~~~~~KAyyRRAq-Ay~~LGdy~EAl~d~~kALel~~ 495 (598)
|.|. |.-.-.|.|. ..++.++|.-|....++.|++.+
T Consensus 185 AYFT~c~Lqp~---H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p 229 (320)
T 3mkr_B 185 AYFTHSNLQPV---HMILVLRTALNLFFKLKNFRTAAAFARRLLELGP 229 (320)
T ss_dssp HHHTTSCCCHH---HHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCC
T ss_pred HHhccCCCcHH---HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 3555 5544445444 67788999999999999998854
No 317
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=52.04 E-value=40 Score=35.05 Aligned_cols=102 Identities=15% Similarity=0.004 Sum_probs=58.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---chHH--HHHHHHHHHHHH-----HHcCChHHHHHHHHHHHH------
Q 007571 392 KLEGNSLFSAGNISGAASKYSEALALCPMR---SKKE--RVVLYSNRAQCH-----LLMQQPLAAISDATRALC------ 455 (598)
Q Consensus 392 KeeGN~lfk~GdY~eAIe~YskALel~P~~---~~~~--~a~ly~NRA~cy-----lKLgdyeeAI~D~~kALe------ 455 (598)
.+.|-.+|+.|+|.+|+..|...|...|-. .+++ ...-+...+.=| +.+.+-+-.-.+-.+.++
T Consensus 118 Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYFT 197 (325)
T 3mv2_A 118 MNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYFT 197 (325)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHGG
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhc
Confidence 447999999999999999999999875531 1111 111122222211 111100000012233333
Q ss_pred ---hCCCCCcCHHHHHHHH-HHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 456 ---LHNPLNRHAKSLWRRA-QAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 456 ---LdP~~~~~~KAyyRRA-qAy~~LGdy~EAl~d~~kALel~~k 496 (598)
|.|. |.-.-.|.| ...++.++|.-|....++.|++.+.
T Consensus 198 ~c~LQp~---H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 239 (325)
T 3mv2_A 198 KAKLSPI---HRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISS 239 (325)
T ss_dssp GSCCCHH---HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred cCCCcHH---HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 3454 444444444 4667789999999988888888663
No 318
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=50.83 E-value=0.64 Score=45.53 Aligned_cols=41 Identities=7% Similarity=-0.065 Sum_probs=35.0
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELLNS 366 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl~~ 366 (598)
..|++||+..+.|.|+++||..+. .||+++++.|.++++.+
T Consensus 167 ~gMk~Gek~~v~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v 209 (213)
T 1fd9_A 167 QLMPAGSTWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISV 209 (213)
T ss_dssp TTCCTTCEEEEEECGGGTTTTCCCSSSCCTTCCEEEEEEEEEE
T ss_pred cCCCCCCEEEEEECchhccCccCCCCCCCCCCeEEEEEEEEEE
Confidence 459999999999999999999886 69999998887776554
No 319
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=49.71 E-value=0.6 Score=46.11 Aligned_cols=39 Identities=23% Similarity=0.138 Sum_probs=32.6
Q ss_pred ccCCccceehhhccccccccCCCC-CCCCccHHHHHHHHH
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR-SSPSNRSKEQIEELL 364 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~-~ip~~~tl~~~~ELl 364 (598)
..|++||+..+.|.|+++||..+. .||+++++.|.++++
T Consensus 182 ~gMk~Gek~~v~IP~~laYG~~g~~~IPp~stLiF~VeL~ 221 (224)
T 1q6h_A 182 KNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTLVFDVELL 221 (224)
T ss_dssp GGSCTTCEEEEEECGGGTTTTTCBTTBCTTCCEEEEEEEE
T ss_pred cCCCCCCEEEEEECchhhcCcCCCCCCCCCCEEEEEEEEE
Confidence 359999999999999999998876 799998877665543
No 320
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=48.63 E-value=22 Score=34.05 Aligned_cols=49 Identities=18% Similarity=0.109 Sum_probs=22.7
Q ss_pred ccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccc
Q 007571 76 NIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLA 134 (598)
Q Consensus 76 ~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a 134 (598)
+-.|-+.|+..+|...... ..++|+|+++|...=.. =++.|+++||.++
T Consensus 172 ~~~vr~~a~~aL~~~~~~~---------~~~~~~L~~~l~d~~~~-vR~~A~~aL~~~~ 220 (280)
T 1oyz_A 172 NGDVRNWAAFAININKYDN---------SDIRDCFVEMLQDKNEE-VRIEAIIGLSYRK 220 (280)
T ss_dssp SHHHHHHHHHHHHHHTCCC---------HHHHHHHHHHTTCSCHH-HHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhhccCc---------HHHHHHHHHHhcCCCHH-HHHHHHHHHHHhC
Confidence 3345555555555542111 12345555555543322 2445555555555
No 321
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=46.85 E-value=56 Score=35.89 Aligned_cols=62 Identities=15% Similarity=0.203 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHh--HhhHHhhcCChHHHHHHHHHHHHHHHHHHHH--HHcCCH-HHHHHHHHHHHHh
Q 007571 356 SKEQIEELLNSR--QRLKWEKNMLKEDLHIKQAAALVVKLEGNSL--FSAGNI-SGAASKYSEALAL 417 (598)
Q Consensus 356 tl~~~~ELl~~k--ek~k~e~~ms~eElee~~~~A~~lKeeGN~l--fk~GdY-~eAIe~YskALel 417 (598)
...-+.+++... ++.+..-.+..+.+.+++..|+.++.++... -+.-+| +.||++|++||+.
T Consensus 395 ~~eeI~dli~ese~~~ik~i~~s~i~sL~eKi~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~ 461 (526)
T 2wb7_A 395 DVKNLIDLYKKKDREKINATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAIND 461 (526)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 344444443322 2333334444456777777888887776321 111122 5667777777654
No 322
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=44.28 E-value=51 Score=36.40 Aligned_cols=71 Identities=8% Similarity=-0.070 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC----CcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhccCC
Q 007571 426 RVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPL----NRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQSN 498 (598)
Q Consensus 426 ~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~----~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k~~ 498 (598)
.+++++-+=..|+..+.|+.|.....++. -|.. +-...-+|..|..+...++|.+|...+..|+..+|.+.
T Consensus 230 qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 230 KAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred hHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 47777777889999999999999999985 3321 11256677789999999999999999999999998644
No 323
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=44.17 E-value=0.49 Score=42.18 Aligned_cols=37 Identities=8% Similarity=-0.157 Sum_probs=30.2
Q ss_pred cCCccceehhhccccccccCCCC-------CCCCccHHHHHHHH
Q 007571 327 HKKLGDSIVNVLQDCIQLQGTVR-------SSPSNRSKEQIEEL 363 (598)
Q Consensus 327 ~~k~GE~~~~~L~pdy~~g~~g~-------~ip~~~tl~~~~EL 363 (598)
.|++||+..+.+.|+++||..+. .||+++++.|.+++
T Consensus 82 ~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel 125 (129)
T 1u79_A 82 PMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEY 125 (129)
T ss_dssp CCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEE
T ss_pred ccCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEE
Confidence 49999999999999999998773 58888877665543
No 324
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=43.91 E-value=36 Score=29.27 Aligned_cols=37 Identities=22% Similarity=0.314 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASKYSEALALCPMR 421 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~ 421 (598)
...-..-...|..+...|+++.|+.+|.+||..+|..
T Consensus 17 e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 17 QKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 3445556678999999999999999999999999984
No 325
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=43.28 E-value=38 Score=29.17 Aligned_cols=31 Identities=23% Similarity=0.152 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALA 416 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALe 416 (598)
..|-..-.++..+.+.|+|++||++..+|..
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3455556667777778888888777766654
No 326
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=42.50 E-value=61 Score=30.40 Aligned_cols=54 Identities=15% Similarity=-0.026 Sum_probs=48.5
Q ss_pred cCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 007571 401 AGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNP 459 (598)
Q Consensus 401 ~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~ 459 (598)
.++.++|-..|+.++.++... +.+|...|.--..+|+...|.+-..+||.+.|.
T Consensus 73 i~D~d~aR~vy~~a~~~hKkF-----AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k 126 (161)
T 4h7y_A 73 IQEPDDARDYFQMARANCKKF-----AFVHISFAQFELSQGNVKKSKQLLQKAVERGAV 126 (161)
T ss_dssp HHCGGGCHHHHHHHHHHCTTB-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred hcCHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCC
Confidence 378899999999999985554 899999999999999999999999999999887
No 327
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=42.29 E-value=14 Score=35.59 Aligned_cols=57 Identities=11% Similarity=0.159 Sum_probs=39.7
Q ss_pred CCccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccCCCchhh
Q 007571 74 DQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPT 142 (598)
Q Consensus 74 ~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~ 142 (598)
+.|-.+=+.|+..+|... ...+||+|+++|...- +--++.|+++||.++..+.+++.
T Consensus 34 ~~~~~vr~~A~~~L~~~~-----------~~~~~~~L~~~l~d~~-~~vR~~A~~aL~~l~~~~~~~~~ 90 (280)
T 1oyz_A 34 DHNSLKRISSARVLQLRG-----------GQDAVRLAIEFCSDKN-YIRRDIGAFILGQIKICKKCEDN 90 (280)
T ss_dssp CSSHHHHHHHHHHHHHHC-----------CHHHHHHHHHHHTCSS-HHHHHHHHHHHHHSCCCTTTHHH
T ss_pred cCCHHHHHHHHHHHHccC-----------CchHHHHHHHHHcCCC-HHHHHHHHHHHHHhccccccchH
Confidence 344456667777777654 1357899999998774 44577888999999876655553
No 328
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=41.22 E-value=0.91 Score=46.02 Aligned_cols=42 Identities=14% Similarity=0.062 Sum_probs=36.6
Q ss_pred ccCCccceehhhccccccccCCCC--CCCCccHHHHHHHHHHHh
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR--SSPSNRSKEQIEELLNSR 367 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~--~ip~~~tl~~~~ELl~~k 367 (598)
..|++||+..+.+.|+++||..|. .||+++++.+.+++..+.
T Consensus 115 ~gm~~Ge~~~v~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~ 158 (280)
T 1q1c_A 115 ATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFK 158 (280)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred hcCCCCCEEEEEECcHHhCCCcCccCCCCCCCcEEEEEEeeeec
Confidence 459999999999999999998775 789999998888887764
No 329
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=39.00 E-value=84 Score=27.05 Aligned_cols=32 Identities=19% Similarity=-0.056 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 464 AKSLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 464 ~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
+-.+-|||.++..-|+|++|+....++.....
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~yL~ 46 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATTYLS 46 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 34556777777777777777777777665543
No 330
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=38.80 E-value=93 Score=25.67 Aligned_cols=26 Identities=19% Similarity=0.034 Sum_probs=13.6
Q ss_pred HHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 470 RAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 470 RAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
+|......|+|++|+..|..+++.+.
T Consensus 25 ~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 25 NAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 33344444566666666655555443
No 331
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=38.19 E-value=23 Score=40.98 Aligned_cols=59 Identities=14% Similarity=0.184 Sum_probs=40.3
Q ss_pred HHHHHH-HhcCCchHHHHHhcccchhhHHHHHHHHhhccccCCCchhhhhhhHHHHHHHHHH
Q 007571 96 EFAESA-VHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPTVASHAEILELSIQL 156 (598)
Q Consensus 96 ~~~~~a-v~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~~~~~~~~~~~~~ 156 (598)
+|-.++ +++||||+|+.+++.- +-.=|..|+|+|++|+....+=..|... ..++.-+++
T Consensus 447 ~~~~~~l~eaGvIp~Lv~Ll~S~-s~~~re~A~~aL~nLS~d~~~R~~lvqq-Gal~~LL~l 506 (778)
T 3opb_A 447 LFNEKYILRTELISFLKREMHNL-SPNCKQQVVRIIYNITRSKNFIPQLAQQ-GAVKIILEY 506 (778)
T ss_dssp HHHHHHTTTTTHHHHHHHHGGGS-CHHHHHHHHHHHHHHHTSGGGHHHHHHT-THHHHHHHH
T ss_pred HHHHHHHHHCcCHHHHHHHHcCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHC-CCHHHHHHH
Confidence 333345 4899999999999763 5667899999999998776554445443 333333433
No 332
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=36.66 E-value=1e+02 Score=34.44 Aligned_cols=91 Identities=10% Similarity=-0.065 Sum_probs=62.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHH
Q 007571 393 LEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQ 472 (598)
Q Consensus 393 eeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAq 472 (598)
..+..++..+...+|...+.++....+++ .+.--++...++.+++..|...+.+.-.-... ..++.|-+|.
T Consensus 257 ~ia~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~---~~r~~YW~~r 327 (618)
T 1qsa_A 257 IVAWRLMGNDVTDEQAKWRDDAIMRSQST------SLIERRVRMALGTGDRRGLNTWLARLPMEAKE---KDEWRYWQAD 327 (618)
T ss_dssp HHHHTSCSTTCCHHHHHHHHHHHHTCCCH------HHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGG---SHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHHHHHHhccccCCCh------HHHHHHHHHHHHCCCHHHHHHHHHHccccccc---cHhHHHHHHH
Confidence 34445566664567777888776544332 11223333445779999999988665442233 6889999999
Q ss_pred HHHHhhcHHHHHHHHHHHHH
Q 007571 473 AYDMLALAKESLLDAILFIN 492 (598)
Q Consensus 473 Ay~~LGdy~EAl~d~~kALe 492 (598)
++..+|+.++|...|.++.+
T Consensus 328 a~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 328 LLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHhc
Confidence 99999999999998888754
No 333
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=35.81 E-value=16 Score=31.31 Aligned_cols=49 Identities=27% Similarity=0.363 Sum_probs=34.0
Q ss_pred CccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhcccc
Q 007571 75 QNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLAT 135 (598)
Q Consensus 75 ~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~ 135 (598)
.+-.|=+.|+..+|...- ..+||+|+++|... .|--++.|++|||.+..
T Consensus 54 ~~~~vR~~A~~aL~~~~~-----------~~a~~~L~~~L~d~-~~~VR~~A~~aL~~~~~ 102 (131)
T 1te4_A 54 EDWRIRGAAAWIIGNFQD-----------ERAVEPLIKLLEDD-SGFVRSGAARSLEQIGG 102 (131)
T ss_dssp SCHHHHHHHHHHHGGGCS-----------HHHHHHHHHHHHHC-CTHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHhcCC-----------HHHHHHHHHHHcCC-CHHHHHHHHHHHHHhCc
Confidence 344666788888887642 13488888888755 45556788888888863
No 334
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=35.75 E-value=1.3 Score=44.76 Aligned_cols=42 Identities=12% Similarity=0.110 Sum_probs=36.0
Q ss_pred ccCCccceehhhccccccccCCCC---CCCCccHHHHHHHHHHHh
Q 007571 326 DHKKLGDSIVNVLQDCIQLQGTVR---SSPSNRSKEQIEELLNSR 367 (598)
Q Consensus 326 ~~~k~GE~~~~~L~pdy~~g~~g~---~ip~~~tl~~~~ELl~~k 367 (598)
..|++||+..+.+.|+|+||..+. .||+++++.|.+++..++
T Consensus 229 ~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~ 273 (280)
T 1q1c_A 229 QRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFE 273 (280)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEE
T ss_pred hCCCCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEe
Confidence 469999999999999999998774 599999988888877764
No 335
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=35.54 E-value=94 Score=25.51 Aligned_cols=25 Identities=16% Similarity=-0.051 Sum_probs=13.5
Q ss_pred HHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 471 AQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 471 AqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
|.-....|+|++|+..|..+++.+.
T Consensus 18 Ave~D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 18 AVKADKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHH
Confidence 3333444666666666666655543
No 336
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=35.25 E-value=1.3e+02 Score=35.90 Aligned_cols=92 Identities=10% Similarity=-0.056 Sum_probs=64.3
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH-h------------------
Q 007571 396 NSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALC-L------------------ 456 (598)
Q Consensus 396 N~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALe-L------------------ 456 (598)
..+.+.+.|+.|.+ -+..+|.+ +..-+-+|.||+..|++++|...+.+|-. +
T Consensus 820 ~~l~~~~~~~~~~~----l~~~~~~~-----~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~ 890 (1139)
T 4fhn_B 820 EKLFLFKQYNACMQ----LIGWLNSD-----PIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAE 890 (1139)
T ss_dssp HHHHHHSCTTHHHH----HHHHSCCC-----HHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHH
T ss_pred HHHHHhhhHHHHHH----HhhhccCC-----cHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccc
Confidence 34667777766544 34567776 34445599999999999999999988731 1
Q ss_pred -CCCCCcCHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 457 -HNPLNRHAKSLWRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 457 -dP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.+..+..+.-|+.....+...+.++.++...+.||+....
T Consensus 891 ~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~ 931 (1139)
T 4fhn_B 891 KYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKET 931 (1139)
T ss_dssp TTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCS
T ss_pred cccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccC
Confidence 1111113344566677888889999999999999987654
No 337
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=35.23 E-value=96 Score=34.81 Aligned_cols=63 Identities=10% Similarity=-0.014 Sum_probs=49.0
Q ss_pred hcCChHHHHHHHHH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcC
Q 007571 374 KNMLKEDLHIKQAA----ALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQ 441 (598)
Q Consensus 374 ~~ms~eElee~~~~----A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLg 441 (598)
..+++.+...+.-. +.++.++|...|..|+|.-|.+..+.++..+|.+ ..+..-+|.+|.++|
T Consensus 431 ~~l~p~~~a~~~v~~~gg~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~-----~~a~~l~a~~~~~l~ 497 (658)
T 2cfu_A 431 DPLSPEDSAGRYVEYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDN-----RAARELQADALEQLG 497 (658)
T ss_dssp SCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHhcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc-----HHHHHHHHHHHHHHH
Confidence 45666655444433 6778899999999999999999999999999998 666666777766555
No 338
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=32.69 E-value=1.2e+02 Score=25.14 Aligned_cols=30 Identities=17% Similarity=0.009 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 466 SLWRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 466 AyyRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
.+..+|.-....|+|++|+..|..+++.+.
T Consensus 18 ~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 18 TVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 345556666777888888888888887765
No 339
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=32.65 E-value=28 Score=31.55 Aligned_cols=50 Identities=24% Similarity=0.433 Sum_probs=26.2
Q ss_pred CCccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhcccc
Q 007571 74 DQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLAT 135 (598)
Q Consensus 74 ~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~ 135 (598)
+.+-.|=..|+..+|...- ..++|.|+++|... .|--++.|+++||.+..
T Consensus 87 d~~~~vr~~a~~aL~~~~~-----------~~~~~~L~~~l~d~-~~~vr~~a~~aL~~~~~ 136 (201)
T 3ltj_A 87 DEDGWVRQSAAVALGQIGD-----------ERAVEPLIKALKDE-DWFVRIAAAFALGEIGD 136 (201)
T ss_dssp CSSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCS-SHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhCc-----------HHHHHHHHHHHcCC-CHHHHHHHHHHHHHhCC
Confidence 3444455556665554321 23556666666444 44445566666666654
No 340
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=32.48 E-value=1.2e+02 Score=25.48 Aligned_cols=28 Identities=18% Similarity=0.013 Sum_probs=17.3
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
.++|.-....|+|++|+..|..+++.+.
T Consensus 19 v~~Ave~D~~g~y~eAl~~Y~~Aie~l~ 46 (93)
T 1wfd_A 19 LKRAVELDAESRYQQALVCYQEGIDMLL 46 (93)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3444444555777777777777766654
No 341
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=32.11 E-value=1.3e+02 Score=24.55 Aligned_cols=28 Identities=11% Similarity=-0.067 Sum_probs=17.9
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECS 495 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~ 495 (598)
..+|.-....|+|++|+..|..+++.+.
T Consensus 17 ~~~Av~~D~~g~y~eAl~~Y~~aie~l~ 44 (85)
T 2v6x_A 17 VQKAIDLDTATQYEEAYTAYYNGLDYLM 44 (85)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3444444555777777777777777654
No 342
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=30.55 E-value=19 Score=41.72 Aligned_cols=52 Identities=19% Similarity=0.255 Sum_probs=35.1
Q ss_pred hhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhh--HHHHHHHHhhcccc
Q 007571 83 AAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWV--EQRVAVRALGHLAT 135 (598)
Q Consensus 83 ~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wv--e~r~~~r~l~h~a~ 135 (598)
|+-+|++-+.+ .+.=..-|+.|++|||+.+|.-.=... =++.|++||.+|+.
T Consensus 477 A~~aL~nLS~d-~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLli 530 (778)
T 3opb_A 477 VVRIIYNITRS-KNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLI 530 (778)
T ss_dssp HHHHHHHHHTS-GGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHh
Confidence 44566666655 334445578999999999998764331 15689999998874
No 343
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=28.87 E-value=41 Score=30.64 Aligned_cols=49 Identities=24% Similarity=0.376 Sum_probs=32.6
Q ss_pred CccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhcccc
Q 007571 75 QNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLAT 135 (598)
Q Consensus 75 ~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~ 135 (598)
.+-.+=..|+..+|...- ..++|+|+++|... .|.-++.|+++||.+..
T Consensus 31 ~~~~vR~~A~~~L~~~~~-----------~~~~~~L~~~l~~~-~~~vr~~a~~aL~~~~~ 79 (211)
T 3ltm_A 31 DSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDE-DAWVRRAAADALGQIGD 79 (211)
T ss_dssp SSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCS-CHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhCC-----------ccHHHHHHHHHcCC-CHHHHHHHHHHHHhhCC
Confidence 334445566666664321 36788888888866 56667788888888864
No 344
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=28.83 E-value=2.1e+02 Score=27.02 Aligned_cols=59 Identities=14% Similarity=0.114 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChH
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPL 444 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdye 444 (598)
+.+.-..=.|.-++-+++|.+|-+.+++|+..+|......+..++.-+--+.+.+|++.
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 35677788899999999999999999999999998755555566666666777788753
No 345
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=28.77 E-value=41 Score=28.70 Aligned_cols=51 Identities=18% Similarity=0.296 Sum_probs=37.1
Q ss_pred ccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhcccc
Q 007571 72 SHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLAT 135 (598)
Q Consensus 72 ~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~ 135 (598)
+++.|-.+=+.|+..+|...- ..+|+|+++|.. =.|.-++.|++|||++..
T Consensus 21 L~~~~~~vR~~A~~~L~~~~~------------~~~~~L~~~L~d-~~~~vR~~A~~aL~~~~~ 71 (131)
T 1te4_A 21 MADENKWVRRDVSTALSRMGD------------EAFEPLLESLSN-EDWRIRGAAAWIIGNFQD 71 (131)
T ss_dssp CCSSCCCSSSSCCSSTTSCSS------------TTHHHHHHGGGC-SCHHHHHHHHHHHGGGCS
T ss_pred hcCCCHHHHHHHHHHHHHhCc------------hHHHHHHHHHcC-CCHHHHHHHHHHHHhcCC
Confidence 444555556667777775531 136999999986 468889999999999985
No 346
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=28.27 E-value=87 Score=33.82 Aligned_cols=95 Identities=8% Similarity=-0.022 Sum_probs=62.0
Q ss_pred CHHHHHHHHHHHHHhCCCC-------c---h-HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC--CCCc-----CH
Q 007571 403 NISGAASKYSEALALCPMR-------S---K-KERVVLYSNRAQCHLLMQQPLAAISDATRALCLHN--PLNR-----HA 464 (598)
Q Consensus 403 dY~eAIe~YskALel~P~~-------~---~-~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP--~~~~-----~~ 464 (598)
..+.|.....++...+-.+ . + .-..-+-+++-.+|+++++..-|-...+..=.-.+ +... .+
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 4567777777777765332 1 1 11233445667789999988887776643222221 1111 24
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHH-hccC
Q 007571 465 KSLWRRAQAYDMLALAKESLLDAILFINE-CSQS 497 (598)
Q Consensus 465 KAyyRRAqAy~~LGdy~EAl~d~~kALel-~~k~ 497 (598)
.-+|..|+.++..++|.+|..++..|++. ++.+
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 56777899999999999999999999998 8864
No 347
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=27.95 E-value=1.1e+02 Score=28.94 Aligned_cols=26 Identities=12% Similarity=-0.101 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHH
Q 007571 427 VVLYSNRAQCHLLMQQPLAAISDATR 452 (598)
Q Consensus 427 a~ly~NRA~cylKLgdyeeAI~D~~k 452 (598)
...|..+|...+..|+++-|...|.+
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~ 59 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQT 59 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 34455555555555555555544444
No 348
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=27.88 E-value=85 Score=25.62 Aligned_cols=29 Identities=10% Similarity=-0.020 Sum_probs=26.4
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
..+|..+...|++++|...|-+|+..+++
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 45799999999999999999999999986
No 349
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=27.47 E-value=1.1e+02 Score=32.45 Aligned_cols=31 Identities=13% Similarity=-0.053 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 007571 426 RVVLYSNRAQCHLLMQQPLAAISDATRALCL 456 (598)
Q Consensus 426 ~a~ly~NRA~cylKLgdyeeAI~D~~kALeL 456 (598)
+..++.-+|.+|+-+++|++|+..++++|..
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 4677888899999999999999999999853
No 350
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=27.19 E-value=1.5e+02 Score=25.98 Aligned_cols=29 Identities=14% Similarity=-0.101 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 468 WRRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 468 yRRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
..+|.-....|+|++|+..|..+++++..
T Consensus 22 v~~Ave~D~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 22 ASKAAQEDKAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 34444455568888888888888877653
No 351
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=26.90 E-value=1.2e+02 Score=25.94 Aligned_cols=28 Identities=11% Similarity=0.000 Sum_probs=25.1
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHHHhcc
Q 007571 469 RRAQAYDMLALAKESLLDAILFINECSQ 496 (598)
Q Consensus 469 RRAqAy~~LGdy~EAl~d~~kALel~~k 496 (598)
.+|..+...|+++.|+..|-+|+..|++
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 4688899999999999999999999986
No 352
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=26.48 E-value=2.2e+02 Score=26.63 Aligned_cols=83 Identities=14% Similarity=0.002 Sum_probs=53.0
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHH-HHhCCCCCcCHHHHHHHHHHHHHhh
Q 007571 400 SAGNISGAASKYSEALALCPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRA-LCLHNPLNRHAKSLWRRAQAYDMLA 478 (598)
Q Consensus 400 k~GdY~eAIe~YskALel~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kA-LeLdP~~~~~~KAyyRRAqAy~~LG 478 (598)
+-|+...-+.+|-+.= . .+=|.++|.-++-...-.+-+...-.- +.-++. ++..++..|.||..+|
T Consensus 73 ~C~NlKrVi~C~~~~n---~-------~se~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~---~~~~l~kia~Ay~Klg 139 (172)
T 1wy6_A 73 KCQNLKSVVECGVINN---T-------LNEHVNKALDILVIQGKRDKLEEIGREILKNNEV---SASILVAIANALRRVG 139 (172)
T ss_dssp GCSCTHHHHHHHHHTT---C-------CCHHHHHHHHHHHHTTCHHHHHHHHHHHC--CCS---CHHHHHHHHHHHHHTT
T ss_pred hhhcHHHHHHHHHHhc---c-------hHHHHHHHHHHHHHhccHhHHHHHHHHHhccCCC---ChHHHHHHHHHHHHhc
Confidence 4566666666664321 1 123667777666443333333333333 454555 7999999999999999
Q ss_pred cHHHHHHHHHHHHHHhc
Q 007571 479 LAKESLLDAILFINECS 495 (598)
Q Consensus 479 dy~EAl~d~~kALel~~ 495 (598)
+..+|-+-+.+|-+.-.
T Consensus 140 ~~r~a~eLl~~AC~kG~ 156 (172)
T 1wy6_A 140 DERDATTLLIEACKKGE 156 (172)
T ss_dssp CHHHHHHHHHHHHHTTC
T ss_pred chhhHHHHHHHHHHhhh
Confidence 99999988888877643
No 353
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=26.03 E-value=5.3e+02 Score=26.18 Aligned_cols=26 Identities=4% Similarity=-0.316 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHHHhhcHHHHHHHHH
Q 007571 463 HAKSLWRRAQAYDMLALAKESLLDAI 488 (598)
Q Consensus 463 ~~KAyyRRAqAy~~LGdy~EAl~d~~ 488 (598)
++..+.-.|..|..-|++.+|..+|.
T Consensus 133 dp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 77888999999999999999988774
No 354
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=25.45 E-value=5.8e+02 Score=26.36 Aligned_cols=103 Identities=12% Similarity=-0.064 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCCCch---HHH----------------HHHHHHHHHHHHHcCChH
Q 007571 385 QAAALVVKLEGNSLFSAGNISGAASK-YSEALALCPMRSK---KER----------------VVLYSNRAQCHLLMQQPL 444 (598)
Q Consensus 385 ~~~A~~lKeeGN~lfk~GdY~eAIe~-YskALel~P~~~~---~~~----------------a~ly~NRA~cylKLgdye 444 (598)
-+.-+.++...+.+.++++|.+|++. |+-|+.+...... .++ .....++..++-.+..-+
T Consensus 32 YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~~~ 111 (336)
T 3lpz_A 32 YEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQPGE 111 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTTC
T ss_pred cHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCCC
Confidence 44566788888889999999999885 4444443222100 000 112222222322222210
Q ss_pred -HHHHHHHHHHHh----CCCCCcCHHHHHHHHHHHHHhhcHHHHHHHH
Q 007571 445 -AAISDATRALCL----HNPLNRHAKSLWRRAQAYDMLALAKESLLDA 487 (598)
Q Consensus 445 -eAI~D~~kALeL----dP~~~~~~KAyyRRAqAy~~LGdy~EAl~d~ 487 (598)
.=....++||.. .....-++..+...|..|..-++|.+|...|
T Consensus 112 p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 112 PVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 112223333322 1111127888888999999999999997776
No 355
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=24.95 E-value=4e+02 Score=24.70 Aligned_cols=65 Identities=11% Similarity=0.053 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc-hHHHHHHHHH---HHHHHHHcCChHHHHHHHHHHHH
Q 007571 391 VKLEGNSLFSAGNISGAASKYSEALALCPMRS-KKERVVLYSN---RAQCHLLMQQPLAAISDATRALC 455 (598)
Q Consensus 391 lKeeGN~lfk~GdY~eAIe~YskALel~P~~~-~~~~a~ly~N---RA~cylKLgdyeeAI~D~~kALe 455 (598)
-...|-.+|+.|+|-+|=+.+..+-...+... .......+.. -|..++..|++..|...+.+|+.
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 45678889999999999999998887765431 2222333333 44455567888888888888876
No 356
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=24.47 E-value=1.2e+02 Score=32.08 Aligned_cols=30 Identities=17% Similarity=0.040 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 007571 426 RVVLYSNRAQCHLLMQQPLAAISDATRALC 455 (598)
Q Consensus 426 ~a~ly~NRA~cylKLgdyeeAI~D~~kALe 455 (598)
+..++.-+|.+|+-+++|++|+..++++|.
T Consensus 195 k~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 195 RWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 467788889999999999999999999986
No 357
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=24.45 E-value=65 Score=29.24 Aligned_cols=51 Identities=24% Similarity=0.429 Sum_probs=26.3
Q ss_pred cCCccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhcccc
Q 007571 73 HDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLAT 135 (598)
Q Consensus 73 ~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~ 135 (598)
++.+-.|=..|+..+|.+.- ..++|.|+++|... .|--++.|++|||.+..
T Consensus 91 ~~~~~~vr~~a~~aL~~~~~-----------~~~~~~L~~~l~d~-~~~vr~~a~~aL~~~~~ 141 (211)
T 3ltm_A 91 KDEDGWVRQSAAVALGQIGD-----------ERAVEPLIKALKDE-DWFVRIAAAFALGEIGD 141 (211)
T ss_dssp TCSSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCS-SHHHHHHHHHHHHHHCC
T ss_pred cCCCHHHHHHHHHHHHHhCc-----------HHHHHHHHHHHhCC-CHHHHHHHHHHHHHcCC
Confidence 34455556666666665431 23455555555432 33345555566665543
No 358
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.29 E-value=1.1e+02 Score=33.67 Aligned_cols=71 Identities=13% Similarity=0.083 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 007571 387 AALVVKLEGNSLFSAGNISGAASKYSEALALCPMR--SKKERVVLYSNRAQCHLLMQQPLAAISDATRALCLHNP 459 (598)
Q Consensus 387 ~A~~lKeeGN~lfk~GdY~eAIe~YskALel~P~~--~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~ 459 (598)
++.-+.-.=..|...+.|++|....+++. .|.. +....+..++-.|.++.-.++|.+|..++..|+..-|.
T Consensus 230 qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 230 KAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSC
T ss_pred hHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 34455555666788899999999999986 5532 44567888888999999999999999999999987765
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=23.79 E-value=1.5e+02 Score=34.78 Aligned_cols=66 Identities=8% Similarity=-0.038 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC-CC-----------------CchHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 007571 392 KLEGNSLFSAGNISGAASKYSEALALC-PM-----------------RSKKERVVLYSNRAQCHLLMQQPLAAISDATRA 453 (598)
Q Consensus 392 KeeGN~lfk~GdY~eAIe~YskALel~-P~-----------------~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kA 453 (598)
.-+|..+...|++++|..+|.+|-.-. +. ........+|...+..+-+.+-|+.++..++.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 668999999999999999999875321 11 011234568889999999999999999999999
Q ss_pred HHhC
Q 007571 454 LCLH 457 (598)
Q Consensus 454 LeLd 457 (598)
|+.-
T Consensus 924 I~~~ 927 (950)
T 4gq2_M 924 DASK 927 (950)
T ss_dssp HHTC
T ss_pred Hhhc
Confidence 9754
No 360
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=23.29 E-value=1.2e+02 Score=32.26 Aligned_cols=32 Identities=16% Similarity=-0.052 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Q 007571 426 RVVLYSNRAQCHLLMQQPLAAISDATRALCLH 457 (598)
Q Consensus 426 ~a~ly~NRA~cylKLgdyeeAI~D~~kALeLd 457 (598)
+..++.-+|.+|+-+++|++|+..++++|...
T Consensus 201 k~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 201 YWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 46778888999999999999999999998754
No 361
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=23.12 E-value=1.4e+02 Score=32.07 Aligned_cols=31 Identities=16% Similarity=0.046 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 007571 426 RVVLYSNRAQCHLLMQQPLAAISDATRALCL 456 (598)
Q Consensus 426 ~a~ly~NRA~cylKLgdyeeAI~D~~kALeL 456 (598)
+..++.-+|.+|+-+++|++|+..++++|..
T Consensus 202 k~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 202 NEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 4678888999999999999999999999875
No 362
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=22.64 E-value=1.5e+02 Score=33.20 Aligned_cols=53 Identities=11% Similarity=0.018 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHhhcHHHH
Q 007571 428 VLYSNRAQCHLLMQQPLAAISDATRALCLHNPLNRHAKSLWRRAQAYDMLALAKES 483 (598)
Q Consensus 428 ~ly~NRA~cylKLgdyeeAI~D~~kALeLdP~~~~~~KAyyRRAqAy~~LGdy~EA 483 (598)
.....+|...+..|+|.-|.+.++.++..+|+ |..|..-+|.+|.++|.-.+.
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~---~~~a~~l~a~~~~~l~~~~~~ 502 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPD---NRAARELQADALEQLGYQAEN 502 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC---cHHHHHHHHHHHHHHHHhccC
Confidence 44666888899999999999999999999999 999999999999999965443
No 363
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=22.43 E-value=3.5e+02 Score=31.73 Aligned_cols=193 Identities=11% Similarity=0.092 Sum_probs=89.3
Q ss_pred HHhhcCCccccccCCccchhhhhhhhhhcccccHHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhccccCCCch
Q 007571 61 IWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTF 140 (598)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f 140 (598)
+.+++.|.+|- +-.-|+..||...-...+ ....-++|.|++.|.-.-.-| +..|.++|+.++++-..-
T Consensus 53 Ll~~L~d~~~~-------vR~~A~~~L~~l~~~~~~----~~~~~i~~~Ll~~l~d~~~~v-R~~a~~~L~~i~~~l~~~ 120 (1230)
T 1u6g_C 53 ILKLLEDKNGE-------VQNLAVKCLGPLVSKVKE----YQVETIVDTLCTNMLSDKEQL-RDISSIGLKTVIGELPPA 120 (1230)
T ss_dssp HHHHTTCSSHH-------HHHHHHHHHHHHHTTSCH----HHHHHHHHHHHHHTTCSSSHH-HHHHHHHHHHHHHHCC--
T ss_pred HHHHhcCCCHH-------HHHHHHHHHHHHHHhCCH----HHHHHHHHHHHHHhcCCcHHH-HHHHHHHHHHHHHhCCCc
Confidence 44556555444 334466666543211111 122346788888876655555 667899999888654321
Q ss_pred h----hhh-hhHHHHHHHHHHHh------------hHHHHHHHhhhhcccccchhhhhhhhccCCCcccccccHHHHHhh
Q 007571 141 P----TVA-SHAEILELSIQLAM------------SSLEIVYSHFYQYFDRRLSYHCDLLTRGMGGVEMESRKAEEWASQ 203 (598)
Q Consensus 141 ~----~~~-~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~ae~w~~q 203 (598)
. ... .+.++++.-++... .++..+-..|- +.=..|+..++..=+..+.-++. .
T Consensus 121 ~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~---~~l~~~~~~ll~~l~~~L~~~~~-------~ 190 (1230)
T 1u6g_C 121 SSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQG---GLLVNFHPSILTCLLPQLTSPRL-------A 190 (1230)
T ss_dssp ---CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTC---SSCTTTHHHHHHHHGGGGGCSSH-------H
T ss_pred ccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHcCCcH-------H
Confidence 0 011 12355554443322 22222222221 11123666665543344332221 2
Q ss_pred hhhhHHHhhhhccccCCccccccchHHhhh-ccccccccCCCCCc----cchhHHHHHhhccCCCCcccCChHHHHHHHh
Q 007571 204 LQCWSLQLINCFAFKPEFLPAICKPEFLAK-LPGMWGGLVNENSP----AGIGLLRTICHHKLGRGPVASCPGLIEALCN 278 (598)
Q Consensus 204 l~c~s~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~c~~~~gr~~~~~~~~~i~~lc~ 278 (598)
.+.=.+..|+.++-. +...|+.. ++.++.+|.+.+++ ..+..+-.++.. .|..-....++++..+.+
T Consensus 191 vR~~a~~al~~l~~~-------~~~~~~~~~l~~l~~~L~~~~~~~~r~~a~~~l~~l~~~-~~~~~~~~l~~l~~~ll~ 262 (1230)
T 1u6g_C 191 VRKRTIIALGHLVMS-------CGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQ-AGHRIGEYLEKIIPLVVK 262 (1230)
T ss_dssp HHHHHHHHHHHHTTT-------C----CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHH-SSGGGTTSCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-------cCHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHH
Confidence 333333344444321 22333333 55566666554332 345555556553 344434456677777777
Q ss_pred hhhcc
Q 007571 279 IARSS 283 (598)
Q Consensus 279 isrss 283 (598)
...+.
T Consensus 263 ~l~d~ 267 (1230)
T 1u6g_C 263 FCNVD 267 (1230)
T ss_dssp HHSSC
T ss_pred HhcCC
Confidence 66544
No 364
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.78 E-value=5.9e+02 Score=26.67 Aligned_cols=70 Identities=11% Similarity=0.013 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-h--CCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 007571 386 AAALVVKLEGNSLFSAGNISGAASKYSEALA-L--CPMRSKKERVVLYSNRAQCHLLMQQPLAAISDATRALCL 456 (598)
Q Consensus 386 ~~A~~lKeeGN~lfk~GdY~eAIe~YskALe-l--~P~~~~~~~a~ly~NRA~cylKLgdyeeAI~D~~kALeL 456 (598)
...+.+..+...++..++|..|-..++++-. . .+. .......++.-.|..+...++|.+|-.+|..++..
T Consensus 175 ~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~-~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 175 EKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPK-YESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSC-CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCC-cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3566777788889999999999999998742 2 222 34667888888999999999999999999988753
No 365
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=21.06 E-value=16 Score=34.18 Aligned_cols=39 Identities=13% Similarity=-0.071 Sum_probs=28.8
Q ss_pred hhhhhcCCcchhHHhhhhhhhhhhhHhhhcccccCCccceehhhcccccccc
Q 007571 294 LLWLLQDPSTCHKVIDKAVPTLIDLAEITNLGDHKKLGDSIVNVLQDCIQLQ 345 (598)
Q Consensus 294 ll~l~~D~~t~~kvld~a~~~lvDl~eL~~Lg~~~k~GE~~~~~L~pdy~~g 345 (598)
++.+.--....+++.|.++.. |++||++.++|.|+|+||
T Consensus 58 P~~f~lG~g~vI~Gwd~gl~~-------------M~~Ge~~~~~ipp~laYG 96 (165)
T 2lkn_A 58 PMELIIGKKFKLPVWETIVCT-------------MREGEIAQFLCDIKHVVL 96 (165)
T ss_dssp CEEEESSSSCSCSHHHHHHTT-------------CCTTCEEEEECCHHHHSS
T ss_pred CEEEEecCCCccHHHHHHHhc-------------CccCceEEEEECHHHhcC
Confidence 444443444555666666665 999999999999999998
No 366
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=20.30 E-value=1.4e+02 Score=31.78 Aligned_cols=30 Identities=27% Similarity=-0.011 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 007571 426 RVVLYSNRAQCHLLMQQPLAAISDATRALC 455 (598)
Q Consensus 426 ~a~ly~NRA~cylKLgdyeeAI~D~~kALe 455 (598)
...++.-+|.+|+-+++|++|+..++++|.
T Consensus 190 k~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 190 TDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 477888899999999999999999999984
Done!