BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007573
(597 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/576 (61%), Positives = 452/576 (78%), Gaps = 11/576 (1%)
Query: 14 RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLF 73
R +F PI + F P S I+LFSTQ V+ N +I L+RAG I AARQ+F
Sbjct: 20 RTIFLPIFHSFNR-----QFHPLS----IKLFSTQDVYAFNVQIGNLARAGNIGAARQVF 70
Query: 74 DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFD 133
D+M +D ++WN+IITGYW+NG ESK LF MP KN+VSWN MIAGCI+++RID+A+
Sbjct: 71 DEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQ 130
Query: 134 YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
YFQAMP+RNTA++NAMISG +++ R+EEA+RLFE+MPRRNVISYTAM+DG+ K GE+++A
Sbjct: 131 YFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQA 190
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
RAL + M KNVVSWTVMI+GYV+N +F EA LF +MPD KN+ +TAMITG+CK G
Sbjct: 191 RALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPD--KNIVAMTAMITGYCKEGK 248
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ A++LF++I +D S+NAMI GYAQNG EEAL+L S M+KM MQPD +TL+SV TA
Sbjct: 249 TDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTA 308
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
CS+L L EGR++HVLV+++G+E+ +S+CNA+ITMY +CG ILDSELAFRQI P++VSW
Sbjct: 309 CSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSW 368
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N +IAAFA+HG Y++AL F +M N +PDGITFLSLLSACGHAGKV+ES++ F M+
Sbjct: 369 NAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIX 428
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
Y I+ EH+ CLVDILSR GQ+EKA++I Q MPFEAD G+WG+LLAAC ++LNV+LGE
Sbjct: 429 SYKIVXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGE 488
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
LAAKK+ EL+PQNS YV+LSN+YAAAGMW +VTRVR LM+EQGV KQ AYSW+EI NKV
Sbjct: 489 LAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKV 548
Query: 554 HYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEI 589
H+FLG D SHP I +I LELK +QM + DD E+
Sbjct: 549 HFFLGDDASHPEIHRIRLELKGMKLQMIADDDIEEV 584
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/581 (61%), Positives = 457/581 (78%), Gaps = 11/581 (1%)
Query: 14 RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLF 73
R +F PI + F P S I+LFSTQ V+ N +I L+RAG I AARQLF
Sbjct: 20 RTIFLPIFHSFNR-----QFHPLS----IKLFSTQDVYAFNVQIGNLARAGNIGAARQLF 70
Query: 74 DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFD 133
D+M +D ++WN+IITGYW+NG ESK LF MP KN+VSWN MIAGCI+++RID+A+
Sbjct: 71 DEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQ 130
Query: 134 YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
YFQAMP+RNTA++NAMISG +++ R+EEA+RLFE+MPRRNVISYTAM+DG+ K GE+++A
Sbjct: 131 YFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQA 190
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
RAL + M KNVVSWTVMI+GYV+N +F EA LF +MPD KN+ +TAMITG+CK G
Sbjct: 191 RALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPD--KNIVAMTAMITGYCKEGK 248
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ A++LF++I +D S+NAMI GYAQNG EEAL+L S M+KM MQPD +TL+SV TA
Sbjct: 249 TDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTA 308
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
CS+L L EGR++HVLV+++G+E+ +S+CNA+ITMY +CG ILDSELAFRQI P++VSW
Sbjct: 309 CSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSW 368
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N +IAAFA+HG Y++AL F +M N +PDGITFLSLLSACGHAGKV+ES++ F M++
Sbjct: 369 NAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIE 428
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
Y I+P EH+ CLVDILSR GQ+EKA++I Q MPFEAD G+WG+LLAAC ++LNV+LGE
Sbjct: 429 SYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGE 488
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
LAAKK+ EL+PQNS YV+LSN+YAAAGMW +VTRVR LM+EQGV KQ AYSW+EI NKV
Sbjct: 489 LAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKV 548
Query: 554 HYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSWS 594
H+FLG D SHP I +I LELK +QM + DD E+ ++ S
Sbjct: 549 HFFLGDDASHPEIHRIRLELKGMKLQMIADDDIEEVFSACS 589
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/513 (63%), Positives = 418/513 (81%), Gaps = 2/513 (0%)
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF 135
M +D ++WN+IITGYW+NG ESK LF MP KN+VSWN MIAGCI+++RID+A+ YF
Sbjct: 1 MPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYF 60
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
QAMP+RNTA++NAMISG +++ R+EEA+RLFE+MPRRNVISYTAM+DG+ K GE+++ARA
Sbjct: 61 QAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARA 120
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
L + M KNVVSWTVMI+GYV+N +F EA LF +MPD KN+ +TAMITG+CK G +
Sbjct: 121 LFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPD--KNIVAMTAMITGYCKEGKTD 178
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A++LF++I +D S+NAMI GYAQNG EEAL+L S M+KM MQPD +TL+SV TACS
Sbjct: 179 KAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACS 238
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+L L EGR++HVLV+++G+E+ +S+CNA+ITMY +CG ILDSELAFRQI P++VSWN
Sbjct: 239 SLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNA 298
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+IAAFA+HG Y++AL F +M N +PDGITFLSLLSACGHAGKV+ES++ F M++ Y
Sbjct: 299 MIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESY 358
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
I+P EH+ CLVDILSR GQ+EKA++I Q MPFEAD G+WG+LLAAC ++LNV+LGELA
Sbjct: 359 KIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELA 418
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
AKK+ EL+PQNS YV+LSN+YAAAGMW +VTRVR LM+EQGV KQ AYSW+EI NKVH+
Sbjct: 419 AKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHF 478
Query: 556 FLGGDMSHPCIDKIHLELKRASVQMKSVDDFVE 588
FLG D SHP I +I LELK +QM + DD E
Sbjct: 479 FLGDDASHPEIHRIRLELKGMKLQMIADDDIEE 511
>gi|356528451|ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/554 (60%), Positives = 425/554 (76%), Gaps = 5/554 (0%)
Query: 36 HSSNCLIRLFS-TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQN 94
HS L LFS T+ V+ N I ALSRAGK+ AAR+LFD+M TKDV+TWN++++ YWQN
Sbjct: 14 HSFFVLATLFSSTRDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQN 73
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL 154
G LQ SK LF SMP++N+VSWN +IA C+ ND + DAF Y A PE+N A+YNA+ISG
Sbjct: 74 GLLQRSKALFHSMPLRNVVSWNSIIAACVQNDNLQDAFRYLAAAPEKNAASYNAIISGLA 133
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMK-KGEVDKARALSDYMSFKNVVSWTVMIT 213
+ GR+++A RLFE MP NV+SYTAM+DG+ + +G + +ARAL + M +N VSW VMI
Sbjct: 134 RCGRMKDAQRLFEAMPCPNVVSYTAMVDGYARVEGGIGRARALFEAMPRRNSVSWVVMIN 193
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
G V+N EA E+F RMP KN TAMITGFCK G +E+AR LF+ I+ +D VS+N
Sbjct: 194 GLVENGLCEEAWEVFVRMPQ--KNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWN 251
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
++ GYAQNG EEAL LFS MI+ MQPDD T VSVF AC++L L EG ++H L+I++
Sbjct: 252 IIMTGYAQNGRGEEALNLFSQMIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIKH 311
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GF++++SVCNA+IT++S+CGGI+DSEL F QI P+LVSWNTIIAAFAQHG Y+KA +F
Sbjct: 312 GFDSDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYF 371
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
QM PDGITFLSLLSAC AGKVNESM+LF LMV YGI P SEHY CLVD++SR
Sbjct: 372 DQMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYGIPPRSEHYACLVDVMSR 431
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
AGQL++A +I MPF+AD+ +WG++LAAC ++LNVELGELAA+++ LDP NS YVML
Sbjct: 432 AGQLQRACKIINEMPFKADSSIWGAVLAACSVHLNVELGELAARRILNLDPFNSGAYVML 491
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SN+YAAAG W+DV R+R+LMKEQGV KQ AYSW++IGNK HYF+GGD SHP I+ IH+ L
Sbjct: 492 SNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWLQIGNKTHYFVGGDPSHPNINDIHVAL 551
Query: 574 KRASVQMKSVDDFV 587
+R ++ MK V DFV
Sbjct: 552 RRITLHMK-VKDFV 564
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 287/559 (51%), Positives = 397/559 (71%), Gaps = 9/559 (1%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG--FLQESKN 102
+ + + +N +ISAL+RAG ++AAR++FD MT +DV++WNA++T W+ G L ++
Sbjct: 10 LAARRLLRDNQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAARR 69
Query: 103 LF-QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
LF ++MP +++VSWN +IAGC+ + +D A YF PERN AT+NAM++G ++ GR+ +
Sbjct: 70 LFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVRLGRVVD 129
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
A RLF++MP RNV+SYT M+D ++GEV++AR + D M +N+VSW MI+G V+N F
Sbjct: 130 AQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGMF 189
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
EARELF MP+ KNV TAMITG CK G +++AR LF+ I+ KD +S+NAMIAGY
Sbjct: 190 VEARELFEAMPE--KNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVH 247
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG EEA+RL + M + ++PD ATL++V TACSAL LL +G+ +H + I+ E+ +S
Sbjct: 248 NGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISF 307
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
NA++TMYS+CG + +SEL F + + ++VSWNTIIAA+AQHG Y+K + F +M + G
Sbjct: 308 SNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEVTGL 367
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
PD ITFLS+LSACGH G V+ S+ LF+LM Y I P +EHY C+VDILSRAGQLEKA
Sbjct: 368 IPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKAS 427
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
+ MP +A+ VWGSLL AC I+ NV+LGELAAK + + D Q+S YV+LSN+YAAAG
Sbjct: 428 SYIKHMPLKAEKNVWGSLLGACQIHGNVQLGELAAKMLVQSDSQSSGPYVILSNIYAAAG 487
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
MW V ++R MKE+GV KQ YSW EIGN+VH F+GGD SHP + KI EL++ S M+
Sbjct: 488 MWGQVNQIRGQMKERGVKKQPGYSWTEIGNEVHMFVGGDASHPEMRKIISELRKISFHMR 547
Query: 582 SVDD----FVEIATSWSSF 596
V + VE+A F
Sbjct: 548 MVTNEAHIMVELAQECGHF 566
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/559 (50%), Positives = 395/559 (70%), Gaps = 9/559 (1%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG--FLQESKN 102
+ + + +N +ISAL+RAG ++AAR++FD M +DV++WNA++T W+ G L ++
Sbjct: 10 LAARRLLRDNQRISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRHHLPAARR 69
Query: 103 LF-QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
LF ++MP +++VSWN +IAGC+ + +D A YF P+RN AT+NAM++G L+ GR ++
Sbjct: 70 LFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLRLGRADD 129
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
A RLF +MP+RNV+SYT M+DG ++GEV +AR + D M +N+VSW MI+GYV+N F
Sbjct: 130 ADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMF 189
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
EA +LF MP+ KNV TAMIT +CK G +E+AR LF+ I+ KD +S+N MIAGY
Sbjct: 190 VEATKLFEAMPE--KNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVH 247
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG EEA+RL + M + ++PD ATL++V TACSAL LL +G+ +H + I+ E+ +S
Sbjct: 248 NGHGEEAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISF 307
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
NA++TMYS+CG + +SEL F + + ++VSWNTIIAA+AQHG Y+K + F +M + G
Sbjct: 308 SNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGL 367
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
PD ITFLS+LSACGH GKV+ S+ LF+LM Y I P +EHY C+VDILSRAGQLEKA
Sbjct: 368 IPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKAS 427
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
+ MP EA+ VWGSLL AC ++ NV+LGELAAK + + D ++S YV+LSN+YAAAG
Sbjct: 428 SYIKDMPLEAEKNVWGSLLGACQMHGNVQLGELAAKMLVQSDSESSGPYVILSNIYAAAG 487
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
MW V +VR MKE+GV KQ YSW EI N+VH F+GGD SHP + KI EL++ S M+
Sbjct: 488 MWGQVNQVRGQMKERGVKKQPGYSWTEIANEVHMFVGGDASHPEMRKIISELRKISFHMR 547
Query: 582 SVDD----FVEIATSWSSF 596
V + VE+A F
Sbjct: 548 MVTNEAHIMVELAQECGHF 566
>gi|357148182|ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 280/543 (51%), Positives = 389/543 (71%), Gaps = 3/543 (0%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF-LQESKN 102
+ +T+ + +N +I+AL+RAG ++AAR++FD M +DV++WNA++T W+ G L ++
Sbjct: 1 MLATRLLVRDNQRITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARR 60
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
LF MP +N++SWN ++AGC+ + +D A YF P RN A++NAM++G ++ GR+++A
Sbjct: 61 LFDDMPSRNVISWNSVVAGCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDA 120
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
LF +MP+RNV+SYT M+DG ++GEV +AR + D M +N+VSW MITGYV+N F
Sbjct: 121 WALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMFD 180
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
EAR+LF MPD KNV TAMITG+CK G +E+AR LF+ I KD +S+NAMI GY N
Sbjct: 181 EARKLFEAMPD--KNVVACTAMITGYCKDGDVESARRLFDGIPVKDVISWNAMITGYVHN 238
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G EEA++L M + ++PD ATL+++ TACSAL LL +GR +H + + E++ S C
Sbjct: 239 GHGEEAMKLHIIMFREGVKPDHATLIAILTACSALALLRQGRSTHAVATKTMLESSTSFC 298
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
NA++TMYS+CG + +SEL F + ++VSWNTIIAA+AQHG Y+KA+ F +M G
Sbjct: 299 NALMTMYSKCGNVGESELVFMNLKIQDIVSWNTIIAAYAQHGKYQKAIALFHEMETRGLI 358
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P+ IT LS+LSACGH G+VN+S++LF+LM Y I PS+EHY C+VDIL RAGQLEKA
Sbjct: 359 PNDITILSMLSACGHVGRVNDSLELFDLMSSKYAISPSAEHYACVVDILGRAGQLEKACS 418
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ MPFEA+ VWG+LL A + NV+LGELAAK + + D +S YVMLSN+YAAAGM
Sbjct: 419 YIKKMPFEAERNVWGALLGASKTHGNVQLGELAAKMLVQSDSVSSGPYVMLSNIYAAAGM 478
Query: 523 WRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
W +V RVR MKE+GV KQ YSW EI NKV+ F+GGD SHP ++KI EL++ S M+
Sbjct: 479 WGEVNRVRGQMKEKGVKKQPGYSWTEIANKVNMFVGGDASHPEMNKIISELRKISFHMQM 538
Query: 583 VDD 585
+ D
Sbjct: 539 MTD 541
>gi|115476932|ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|215715342|dbj|BAG95093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/547 (51%), Positives = 393/547 (71%), Gaps = 3/547 (0%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF-LQESKN 102
L S++ + +N +I+AL+RAG ++AAR++FD M +D ++WNA++T W+ G L +++
Sbjct: 10 LASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARS 69
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
LF MP +N++SWN +IAGC+ + + A YF P RN A++NAM++G ++ G +E+A
Sbjct: 70 LFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDA 129
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
LF+QMP RNV+SYT M+DG + GEV AR L D M +N+VSW MI+GYV N
Sbjct: 130 RSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLE 189
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
EAR+LF MP+ KNV TAMITG+CK G L+NAR LF+ I+ KD +S+NA+I+GY N
Sbjct: 190 EARKLFEAMPE--KNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHN 247
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G+ EEA +L+ M++ ++PD ATL+++ TACS+L LL +GR +H +VI+ E+++S+C
Sbjct: 248 GLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISIC 307
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
NA++TMYS+CG + +SEL F + S ++VSWNTIIAA+AQHG Y+K + F +M L G
Sbjct: 308 NALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLI 367
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P+ ITFLS+LSACGHAG+V+ES+ LF+LM Y I P +EHY C+VDILSRAGQLEKA
Sbjct: 368 PNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACS 427
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ MP EA+ VWG+LL A + NV+LGELAAK + D ++S YVMLSN+YAAAGM
Sbjct: 428 YIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGM 487
Query: 523 WRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
W +V RVR MKE+GV KQ +SW EI +KVH F+GGD SHP +D I EL++ S M+
Sbjct: 488 WGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSELRKISFHMQM 547
Query: 583 VDDFVEI 589
V D ++
Sbjct: 548 VTDKTQM 554
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+ + + NA ++ S+ G + + +F + ++D+++WN II Y Q+G Q+
Sbjct: 295 VIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKV 354
Query: 101 KNLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMIS 151
LF M + N +++ M++ C R+D++ F M + + Y ++
Sbjct: 355 IALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVD 414
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ G+LE+A ++MP
Sbjct: 415 ILSRAGQLEKACSYIKEMP 433
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/559 (42%), Positives = 346/559 (61%), Gaps = 33/559 (5%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN-- 111
N IS R + AAR LFDQM +DV++WNA+++GY QNG+++E+K +F MP KN
Sbjct: 115 NVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSI 174
Query: 112 -----------------------------IVSWNCMIAGCIDNDRIDDAFDYFQAMPERN 142
++SWNCM+ G + +R+ DA F MPER+
Sbjct: 175 SWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERD 234
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
++N MISG+ ++G L EA RLFE+ P R+V ++TAM+ G+++ G +D+AR + D M
Sbjct: 235 EVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPE 294
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
KN VSW +I GYV+ +R +ARELF MP +NV MITG+ + G + AR F+
Sbjct: 295 KNSVSWNAIIAGYVQCKRMDQARELFEAMPC--QNVSSWNTMITGYAQNGDIAQARNFFD 352
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
R+ +D +S+ A+IAGYAQ+G EEAL LF M + + + +T S + C+ + L
Sbjct: 353 RMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALEL 412
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+Q H V++ G E+ V NA++ MY +CG I D+ + F I +VSWNT+IA +A+
Sbjct: 413 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR 472
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG ++AL+ F M G PD +T + +LSAC H G V++ + F M + YGI +S+
Sbjct: 473 HGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSK 532
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HYTC++D+L RAG+L+ A + + MPFE D WG+LL A I+ N ELGE AAK + E+
Sbjct: 533 HYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM 592
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P NS +YV+LSNLYAA+G W DV R+RL M+++GV K YSW+E+ NK+H F GD
Sbjct: 593 EPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSV 652
Query: 563 HPCIDKIHLELKRASVQMK 581
HP D+I+ L+ ++MK
Sbjct: 653 HPERDRIYTFLEELDLKMK 671
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 137/433 (31%), Positives = 239/433 (55%), Gaps = 20/433 (4%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N I+ R G+ +A +LF+ M + I+WNA+I+G N ++ LF+ MP +++V
Sbjct: 53 NIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLV 112
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN MI+GC+ + A F MPER+ ++NAM+SG+ ++G ++EA +F++MP +N
Sbjct: 113 SWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN 172
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
IS+ ML +++ G ++ AR L + + ++SW M+ GYVK R +AR +F RMP+
Sbjct: 173 SISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPE 232
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D+ + MI+G+ + G L A+ LFE +D ++ AM++GY QNG+ +EA R+F
Sbjct: 233 RDEVSW--NTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFD 290
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA----NVSVCNAVITMY 349
GM + + +A +++ + C + +++ R+ FEA NVS N +IT Y
Sbjct: 291 GMPEKNSVSWNA-IIAGYVQC---KRMDQAREL--------FEAMPCQNVSSWNTMITGY 338
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++ G I + F ++ + +SW IIA +AQ G+ E+AL F +M +G + TF
Sbjct: 339 AQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFT 398
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
S LS C + + +VK G+ L+ + + G ++ A+ + +G+
Sbjct: 399 STLSTCAEIAALELGKQVHGRVVKA-GLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE- 456
Query: 470 EADTGVWGSLLAA 482
E + W +++A
Sbjct: 457 EKEVVSWNTMIAG 469
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 180/400 (45%), Gaps = 60/400 (15%)
Query: 43 RLFS---TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
RLF + VF A +S + G + AR++FD M K+ ++WNAII GY Q + +
Sbjct: 256 RLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQ 315
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
++ LF++MP +N+ SWN MI G N I A ++F MP+R++ ++ A+I+G+ + G
Sbjct: 316 ARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYG 375
Query: 160 EEATRLFEQMPRR----NVISYTAMLD-----GFMKKGEVDKARALSDYMSFKNVVSWTV 210
EEA LF +M R N ++T+ L ++ G+ R + + V
Sbjct: 376 EEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVG-NA 434
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
++ Y K +A +F + +K V MI G+ + G + A +LFE
Sbjct: 435 LLVMYCKCGNIDDAYIVFEGIE--EKEVVSWNTMIAGYARHGFGKEALMLFE-------- 484
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
M K + PDD T+V V +ACS L+++G + +
Sbjct: 485 -----------------------SMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSM 521
Query: 331 IRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHY-- 386
++ G AN +I + R G + D++ + + P+ +W ++ A HG+
Sbjct: 522 TQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTEL 581
Query: 387 -EKALIFFSQMGLNGFDPDGITFLSLLS----ACGHAGKV 421
EKA +M +PD LLS A G G V
Sbjct: 582 GEKAAKMIFEM-----EPDNSGMYVLLSNLYAASGRWGDV 616
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/567 (41%), Positives = 349/567 (61%), Gaps = 33/567 (5%)
Query: 46 STQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQ 105
S ++ F+ + R + AAR LFDQM +DV++WNA+++GY QNG+++E+K +F
Sbjct: 26 SPEFDFLERHDLRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFD 85
Query: 106 SMPVKN-------------------------------IVSWNCMIAGCIDNDRIDDAFDY 134
MP KN ++SWNCM+ G + +R+ DA
Sbjct: 86 EMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGI 145
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
F MPER+ ++N MISG+ ++G L EA RLFE+ P R+V ++TAM+ G+++ G +D+AR
Sbjct: 146 FDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEAR 205
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
+ D M KN VSW +I GYV+ +R +ARELF MP +NV MITG+ + G +
Sbjct: 206 RVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPC--QNVSSWNTMITGYAQNGDI 263
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
AR F+R+ +D +S+ A+IAGYAQ+G EEAL LF M + + + +T S + C
Sbjct: 264 AQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTC 323
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ + L G+Q H V++ G E+ V NA++ MY +CG I D+ + F I +VSWN
Sbjct: 324 AEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWN 383
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+IA +A+HG ++AL+ F M G PD +T + +LSAC H G V++ + F M +
Sbjct: 384 TMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQD 443
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
YGI +S+HYTC++D+L RAG+L+ A + + MPFE D WG+LL A I+ N ELGE
Sbjct: 444 YGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEK 503
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
AAK + E++P NS +YV+LSNLYAA+G W DV R+RL M+++GV K YSW+E+ NK+H
Sbjct: 504 AAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIH 563
Query: 555 YFLGGDMSHPCIDKIHLELKRASVQMK 581
F GD HP D+I+ L+ ++MK
Sbjct: 564 TFTVGDSVHPERDRIYTFLEELDLKMK 590
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/565 (40%), Positives = 353/565 (62%), Gaps = 35/565 (6%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN-- 111
N +S + G +SAAR LF+QM KDV++WNA+++G+ QNGF++E++ +F M VKN
Sbjct: 126 NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEI 185
Query: 112 -----------------------------IVSWNCMIAGCIDNDRIDDAFDYFQAMPERN 142
IVSWNC++ G + R+DDA F MP R+
Sbjct: 186 SWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRD 245
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
++N MI+G+ ++G L EA RLFE++P R+V ++TAM+ GF++ G +D+A + + M
Sbjct: 246 KISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
KN VSW MI GYV++++ +ARELF +MP +N M+TG+ + G ++ A++LF+
Sbjct: 306 KNEVSWNAMIAGYVQSQQIEKARELFDQMPS--RNTSSWNTMVTGYAQCGNIDQAKILFD 363
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ +DC+S+ AMI+GYAQ+G +EEAL LF M + + + L ++C+ + L
Sbjct: 364 EMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALEL 423
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+Q H +++ GF+ NA++ MY +CG I ++ F I ++VSWNT+IA +A+
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG ++AL F M + PD +T + +LSAC H G V++ M+ F M + YGI +++
Sbjct: 484 HGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAK 542
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HYTC++D+L RAG+L++A + + MPF D WG+LL A I+ + ELGE AA+K+ E+
Sbjct: 543 HYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM 602
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P NS +YV+LSNLYAA+G WR+V +R M+++GV K YSW+EI NK H F GD S
Sbjct: 603 EPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCS 662
Query: 563 HPCIDKIHLELKRASVQMKSVDDFV 587
HP ++I+ L+ +++K D FV
Sbjct: 663 HPEAERIYAYLEELDLELKK-DGFV 686
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 234/429 (54%), Gaps = 12/429 (2%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N KISA R G+ +A +F+ M + +T+NA+I+GY N ++ +F+ MP ++++
Sbjct: 64 NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLI 123
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN M++G + N + A F MPE++ ++NAM+SGF ++G +EEA ++F+QM +N
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKN 183
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
IS+ +L +++ G ++ AR L D +VSW ++ GYV+ +R +AR LF RMP
Sbjct: 184 EISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPV 243
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
DK + + MITG+ + G+L AR LFE + +D ++ AM++G+ QNG+ +EA R+F
Sbjct: 244 RDKISWNI--MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFE 301
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + ++ + ++ Q + + R+ + N S N ++T Y++CG
Sbjct: 302 EMP----EKNEVSWNAMIAGYVQSQQIEKARE----LFDQMPSRNTSSWNTMVTGYAQCG 353
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I +++ F ++ + +SW +I+ +AQ G E+AL F +M +G + LS
Sbjct: 354 NIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALS 413
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
+C + L +VK G L+ + + G +E+A+ + + + E D
Sbjct: 414 SCAEIAALELGKQLHGRLVKA-GFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT-EKDI 471
Query: 474 GVWGSLLAA 482
W +++A
Sbjct: 472 VSWNTMIAG 480
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 205/362 (56%), Gaps = 14/362 (3%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D++ WN I+ Y + G + + ++F M ++ V++N MI+G + N++ D A F+ MP
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMP 118
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+R+ ++N M+SG++K+G L A LF QMP ++V+S+ AML GF + G V++AR + D
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQ 178
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M KN +SW +++ YV+N R +AR LF D++ + ++ G+ + L++AR
Sbjct: 179 MLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWE--IVSWNCLMGGYVRKKRLDDARS 236
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LF+R+ +D +S+N MI GYAQNG+ EA RLF + D+ A +VS F +
Sbjct: 237 LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTA-MVSGFVQNG---M 292
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L+E + + E N NA+I Y + I + F Q+ S N SWNT++
Sbjct: 293 LDEATR----IFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG 348
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+AQ G+ ++A I F +M D I++ +++S +G+ E++ LF M + GI+
Sbjct: 349 YAQCGNIDQAKILFDEMP----QRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILN 404
Query: 440 SS 441
S
Sbjct: 405 RS 406
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 148/333 (44%), Gaps = 55/333 (16%)
Query: 33 FTPHSSNCLI----RLFST---QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWN 85
T ++ N L+ RLF + VF A +S + G + A ++F++M K+ ++WN
Sbjct: 253 ITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN 312
Query: 86 AIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT 145
A+I GY Q+ +++++ LF MP +N SWN M+ G ID A F MP+R+ +
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCIS 372
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPR---------------------------------- 171
+ AMISG+ + G+ EEA LF +M R
Sbjct: 373 WAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV 432
Query: 172 -----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
I+ A+L + K G +++A + + ++ K++VSW MI GY ++ EA
Sbjct: 433 KAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALA 492
Query: 227 LFYRMPDYDKNVFVVTAMITGFCK-VGMLENARLLFERIQPKDCVSFNA-----MIAGYA 280
LF M K V + C G+++ F + ++ NA MI
Sbjct: 493 LFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLG 552
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ G +EAL L M M PD AT ++ A
Sbjct: 553 RAGRLDEALNL---MKSMPFYPDAATWGALLGA 582
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/540 (43%), Positives = 344/540 (63%), Gaps = 11/540 (2%)
Query: 57 ISALSRAGKISAARQLFDQM-TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
IS + G I AR+LFD++ K+V+TW A++ GY ++ + +++ LF MP KN+VSW
Sbjct: 90 ISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSW 149
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
N MI G N RID A F+ MPERN ++N ++S + GR+EEA RLF++MP R+VI
Sbjct: 150 NTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVI 209
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
S+TAM+ G K G +D+AR L D M +NVVSW MITGY +N R EA +LF RMP+ D
Sbjct: 210 SWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERD 269
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ MITG + G L AR LF + K+ +S+ MI G Q G +EEAL++FS M
Sbjct: 270 LPSW--NTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRM 327
Query: 296 IKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ + +P+ T VSV ACS L L EG+Q H ++ + ++ + V +A+I MYS+CG
Sbjct: 328 LSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGE 387
Query: 355 ILDSELAFRQ--IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
+ + F +LVSWN IIAA+A HG+ ++A+ FF +M +GF PD +T++ LL
Sbjct: 388 LGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLL 447
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SAC HAG V E + F+ +VK I+ +HY CLVD+ RAG+L++A+ + + +
Sbjct: 448 SACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPS 507
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
VWG+LLA C ++ NV++G+ AAKK+ E++P+N+ Y++LSN+YA+ G WR+ RVRL
Sbjct: 508 ARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLK 567
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV-----DDFV 587
MK++G+ KQ SWIE+GN+VH F+ GD SH I+ L+ +MK +DF+
Sbjct: 568 MKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPNNDFI 627
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 194/382 (50%), Gaps = 58/382 (15%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N I ++ G+I +A LF++M ++V++WN +++ Q G ++E++ LF MP ++++
Sbjct: 150 NTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVI 209
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SW MIAG N RID+A F MPERN ++NAMI+G+ ++ RL+EA LFE+MP R+
Sbjct: 210 SWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERD 269
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-- 231
+ S+ M+ G ++ G++ +AR L + M KNV+SWT MITG V+ EA ++F RM
Sbjct: 270 LPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLS 329
Query: 232 -----PD-------------------------------YDKNVFVVTAMITGFCKVGMLE 255
P+ Y + FVV+A+I + K G L
Sbjct: 330 TNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELG 389
Query: 256 NARLLFER--IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
AR +F+ +D VS+N +IA YA +G +EA+ F M K +PDD T V + +A
Sbjct: 390 TARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSA 449
Query: 314 CSALQLLNEG--------RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF--R 363
CS L+ EG + +LV + + V +C G L F R
Sbjct: 450 CSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGR--------AGRLKEAFGFIER 501
Query: 364 QIHSPNLVSWNTIIAAFAQHGH 385
P+ W ++A H +
Sbjct: 502 LETKPSARVWGALLAGCNVHAN 523
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 196/376 (52%), Gaps = 47/376 (12%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM- 200
N A N MI+ K GR+ EA RLF++M +VI++T ++ G++K G +++AR L D +
Sbjct: 51 NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 110
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
+ KNVV+WT M+ GY+++ + +A +LF MP +KNV MI G+ + G +++A L
Sbjct: 111 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMP--NKNVVSWNTMIDGYAQNGRIDSAMYL 168
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
FE++ ++ VS+N +++ AQ G EEA RLF M + D+ + ++ S +
Sbjct: 169 FEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDV----ISWTAMIAGLSKNGRI 224
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSR--------------------------CGG 354
+E R L+ E NV NA+IT Y++ G
Sbjct: 225 DEAR----LLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGL 280
Query: 355 ILDSELA-----FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITF 408
I + +L F ++ N++SW T+I Q G E+AL FS+M NG P+ TF
Sbjct: 281 IQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTF 340
Query: 409 LSLLSACGHAGKVNESMDLFELMVK-VYGIIPSSEHYTCLVDILSRAGQLEKAWQI-TQG 466
+S+L AC + + E + +++ K VY S+ + L+++ S+ G+L A ++ G
Sbjct: 341 VSVLGACSNLAGLGEGQQVHQIISKTVYQ--DSTFVVSALINMYSKCGELGTARKMFDDG 398
Query: 467 MPFEADTGVWGSLLAA 482
M + D W ++AA
Sbjct: 399 MTSQRDLVSWNGIIAA 414
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 140/314 (44%), Gaps = 60/314 (19%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D NV MIT K G + AR LF+ ++ D +++ +I+GY + G+ EEA RLF
Sbjct: 49 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFD- 107
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
R + NV A++ Y R
Sbjct: 108 -------------------------------------RVDAKKNVVTWTAMVGGYIRSNK 130
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I D+E F ++ + N+VSWNT+I +AQ+G + A+ F +M + + +++ +++S
Sbjct: 131 ISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMP----ERNVVSWNTVMSM 186
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
G++ E+ LF+ M + I +T ++ LS+ G++++A + MP E +
Sbjct: 187 LAQCGRIEEARRLFDRMPERDVI-----SWTAMIAGLSKNGRIDEARLLFDRMP-ERNVV 240
Query: 475 VWGSLLAACVINLNVELGELAAKKM--RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
W +++ NL ++ ++M R+L N+ + ++ N D+ R R L
Sbjct: 241 SWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQN--------GDLRRARKL 292
Query: 533 MKEQGVTKQCAYSW 546
E + K+ SW
Sbjct: 293 FNE--MPKKNVISW 304
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/565 (40%), Positives = 353/565 (62%), Gaps = 35/565 (6%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN-- 111
N +S + G +SAAR LF+QM KDV++WNA+++G+ QNGF++E++ +F M VKN
Sbjct: 126 NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEI 185
Query: 112 -----------------------------IVSWNCMIAGCIDNDRIDDAFDYFQAMPERN 142
IVSWNC++ G + R+DDA F MP R+
Sbjct: 186 SWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRD 245
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
++N MI+G+ ++G L EA RLFE++P R+V ++TAM+ GF++ G +D+A + + M
Sbjct: 246 KISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
KN VSW MI GYV++++ +ARELF +MP +N M+TG+ + G ++ A++LF+
Sbjct: 306 KNEVSWNAMIAGYVQSQQIEKARELFDQMPS--RNTSSWNTMVTGYAQCGNIDQAKILFD 363
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ +DC+S+ AMI+GYAQ+G +EEAL LF M + + + L ++C+ + L
Sbjct: 364 EMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALEL 423
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+Q H +++ GF+ NA++ MY +CG I ++ F I ++VSWNT+IA +A+
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG ++AL F M + PD +T + +LSAC H G V++ M+ F M + YGI +++
Sbjct: 484 HGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAK 542
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HYTC++D+L RAG+L++A + + MPF D WG+LL A I+ + ELGE AA+K+ E+
Sbjct: 543 HYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM 602
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P NS +YV+LSNLYAA+G WR+V +R M+++GV K YSW+EI NK H F GD S
Sbjct: 603 EPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCS 662
Query: 563 HPCIDKIHLELKRASVQMKSVDDFV 587
HP ++I+ L+ +++K D FV
Sbjct: 663 HPEAERIYAYLEELDLELKK-DGFV 686
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 234/429 (54%), Gaps = 12/429 (2%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N KISA R G+ +A +F+ M + +T+NA+I+GY N ++ +F+ MP ++++
Sbjct: 64 NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLI 123
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN M++G + N + A F MPE++ ++NAM+SGF ++G +EEA ++F+QM +N
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKN 183
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
IS+ +L +++ G ++ AR L D +VSW ++ GYV+ +R +AR LF RMP
Sbjct: 184 EISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPV 243
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
DK + + MITG+ + G+L AR LFE + +D ++ AM++G+ QNG+ +EA R+F
Sbjct: 244 RDKISWNI--MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFE 301
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + ++ + ++ Q + + R+ + N S N ++T Y++CG
Sbjct: 302 EMP----EKNEVSWNAMIAGYVQSQQIEKARE----LFDQMPSRNTSSWNTMVTGYAQCG 353
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I +++ F ++ + +SW +I+ +AQ G E+AL F +M +G + LS
Sbjct: 354 NIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALS 413
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
+C + L +VK G L+ + + G +E+A+ + + + E D
Sbjct: 414 SCAEIAALELGKQLHGRLVKA-GFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT-EKDI 471
Query: 474 GVWGSLLAA 482
W +++A
Sbjct: 472 VSWNTMIAG 480
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 205/362 (56%), Gaps = 14/362 (3%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D++ WN I+ Y + G + + ++F M ++ V++N MI+G + N++ D A F+ MP
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMP 118
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+R+ ++N M+SG++K+G L A LF QMP ++V+S+ AML GF + G V++AR + D
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQ 178
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M KN +SW +++ YV+N R +AR LF D++ + ++ G+ + L++AR
Sbjct: 179 MLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWE--IVSWNCLMGGYVRKKRLDDARS 236
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LF+R+ +D +S+N MI GYAQNG+ EA RLF + D+ A +VS F +
Sbjct: 237 LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTA-MVSGFVQNG---M 292
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L+E + + E N NA+I Y + I + F Q+ S N SWNT++
Sbjct: 293 LDEATR----IFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG 348
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+AQ G+ ++A I F +M D I++ +++S +G+ E++ LF M + GI+
Sbjct: 349 YAQCGNIDQAKILFDEMP----QRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILN 404
Query: 440 SS 441
S
Sbjct: 405 RS 406
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 149/333 (44%), Gaps = 55/333 (16%)
Query: 33 FTPHSSNCLI----RLFST---QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWN 85
T ++ N L+ RLF + VF A +S + G + A ++F++M K+ ++WN
Sbjct: 253 ITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN 312
Query: 86 AIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT 145
A+I GY Q+ +++++ LF MP +N SWN M+ G ID A F MP+R+ +
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCIS 372
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPR---------------------------------- 171
+ AMISG+ + G+ EEA LF +M R
Sbjct: 373 WAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV 432
Query: 172 -----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
I+ A+L + K G +++A + + ++ K++VSW MI GY ++ EA
Sbjct: 433 KAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALA 492
Query: 227 LFYRM-----PDYDKNVFVVTAMI-TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
LF M PD V V++A TGF GM + + + MI
Sbjct: 493 LFESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLG 552
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ G +EAL L M M PD AT ++ A
Sbjct: 553 RAGRLDEALNL---MKSMPFYPDAATWGALLGA 582
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/599 (39%), Positives = 362/599 (60%), Gaps = 43/599 (7%)
Query: 23 ILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVI 82
ILS+ S P S+ + + V +N I+ L + GKI ARQ+F++M +DV+
Sbjct: 39 ILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVV 98
Query: 83 TWNAIITGYWQNGFLQESKNLFQ--------------------------------SMPVK 110
+W A+ITGY + G ++E+K LF +MPVK
Sbjct: 99 SWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVK 158
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
N++SWN MI G ID A D F+ MPERN ++N +I+ F++ R++EA LF +MP
Sbjct: 159 NVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMP 218
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
R+VIS+T M+ G K G +D AR L D M +NVVSW MI GY +N R EA +LF +
Sbjct: 219 ERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQ 278
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
MP+ + + + MITGF + G LE A F ++ K+ V++ A+I+G+ Q+G +EEAL+
Sbjct: 279 MPERELSSW--NTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALK 336
Query: 291 LFSGM-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
+FS M +++P++ T VSV ACS L L EG+Q H ++ + ++ V +A+I MY
Sbjct: 337 IFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMY 396
Query: 350 SRCGGILDSELAFR-----QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
S+CG + ELA + I ++VSWN +IAA+A HGH KA+ F +M GF PD
Sbjct: 397 SKCGEL---ELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPD 453
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+T+++LLSAC HAG V+E + LFE +V+ I +H+TCLVD+ RAG+L++A+
Sbjct: 454 NVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFI 513
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
+G+ + VW +LLA C ++ +++LG+L A+K+ E +P+N+ Y++LSN+YA+ G WR
Sbjct: 514 KGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWR 573
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+ VR+ MK++G+ KQ SWIE+GN VH F+ GD SH + I+L L +MK +
Sbjct: 574 EAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKI 632
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/599 (39%), Positives = 362/599 (60%), Gaps = 43/599 (7%)
Query: 23 ILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVI 82
ILS+ S P S+ + + V +N I+ L + GKI ARQ+F++M +DV+
Sbjct: 39 ILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVV 98
Query: 83 TWNAIITGYWQNGFLQESKNLFQ--------------------------------SMPVK 110
+W A+ITGY + G ++E+K LF +MPVK
Sbjct: 99 SWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVK 158
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
N++SWN MI G ID A D F+ MPERN ++N +I+ F++ R++EA LF +MP
Sbjct: 159 NVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMP 218
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
R+VIS+T M+ G K G +D AR L D M +NVVSW MI GY +N R EA +LF +
Sbjct: 219 ERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQ 278
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
MP+ + + + MITGF + G LE A F ++ K+ V++ A+I+G+ Q+G +EEAL+
Sbjct: 279 MPERELSSW--NTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALK 336
Query: 291 LFSGM-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
+FS M +++P++ T VSV ACS L L EG+Q H ++ + ++ V +A+I MY
Sbjct: 337 IFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMY 396
Query: 350 SRCGGILDSELAFR-----QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
S+CG + ELA + I ++VSWN +IAA+A HGH KA+ F +M GF PD
Sbjct: 397 SKCGEL---ELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPD 453
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+T+++LLSAC HAG V+E + LFE +V+ I +H+TCLVD+ RAG+L++A+
Sbjct: 454 NVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFI 513
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
+G+ + VW +LLA C ++ +++LG+L A+K+ E +P+N+ Y++LSN+YA+ G WR
Sbjct: 514 KGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWR 573
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+ VR+ MK++G+ KQ SWIE+GN VH F+ GD SH + I+L L +MK +
Sbjct: 574 EAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKI 632
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/545 (40%), Positives = 333/545 (61%), Gaps = 3/545 (0%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
N P + L + N IS + +S AR+ FD M ++V++W A++ GY
Sbjct: 60 NNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGY 119
Query: 92 WQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
Q G + E++ LF MP KN+VSW M+ G I RID+A F MP ++ MIS
Sbjct: 120 VQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMIS 179
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
G+ + GRL EA LF++MPRRNVIS+T M+ G+++ G+VD AR L + M KN VSWT M
Sbjct: 180 GYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAM 239
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ GY + R EA ELF MP K V AMI GF + G + AR +F++I+ KD +
Sbjct: 240 LMGYTQGGRIEEASELFDAMPV--KAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGT 297
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
++AMI Y + G EAL LF+ M + +Q + +L+SV + C++L L+ GRQ H ++
Sbjct: 298 WSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELV 357
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
++ F+++V V + +ITMY +CG ++ + F + ++V WN+II +AQHG E+AL
Sbjct: 358 KSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQ 417
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F +M +G DG+TF+ +LSAC + GKV E +++FE M Y + P +EHY C+VD+L
Sbjct: 418 VFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLL 477
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
RAG + A + Q MP EAD +WG+LL AC ++N+ L E+AAKK+ +L+P+N+ Y+
Sbjct: 478 GRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYI 537
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG-DMSHPCIDKIH 570
+LSN+YA+ G W DV +R M+ + V+K SWIE+ +VH F GG HP + I
Sbjct: 538 LLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIM 597
Query: 571 LELKR 575
L++
Sbjct: 598 KMLEK 602
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 227/442 (51%), Gaps = 47/442 (10%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
R + T N++I+ +R G+I +AR++FD+M K +++WN+++ GY+QN +E++
Sbjct: 9 RRYCTSVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARY 68
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
LF MP +N VSWN +I+G + N + +A F MPERN ++ AM+ G+++ G + EA
Sbjct: 69 LFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEA 128
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
LF QMP +NV+S+T ML G ++ +D+AR L D M K+VV+ T MI+GY + R
Sbjct: 129 ETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLA 188
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
EARELF MP +NV T MI+G+ + G ++ AR LFE + K+ VS+ AM+ GY Q
Sbjct: 189 EARELFDEMP--RRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQG 246
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G EEA LF M P A V C
Sbjct: 247 GRIEEASELFDAM------PVKA---------------------------------VVAC 267
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
NA+I + + G + + F QI + +W+ +I + + G +AL F+ M G
Sbjct: 268 NAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQ 327
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY--TCLVDILSRAGQLEKA 460
+ + +S+LS C ++ + +VK S+ + + L+ + + G L KA
Sbjct: 328 SNFPSLISVLSVCASLASLDHGRQVHAELVKSQF---DSDVFVASVLITMYVKCGDLVKA 384
Query: 461 WQITQGMPFEADTGVWGSLLAA 482
QI D +W S++
Sbjct: 385 RQIFDRFS-PKDIVMWNSIITG 405
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/551 (39%), Positives = 340/551 (61%), Gaps = 3/551 (0%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
N P + L + N +S + G IS AR++FD+M ++V++W +++ GY
Sbjct: 60 NKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGY 119
Query: 92 WQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
Q G + E++ LF MP KN+VSW M+ G I++ R+D+A F +P ++ MI
Sbjct: 120 VQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIG 179
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
G GRL EA +F++MP+RNV+++T+M+ G+ +VD AR L + M KN V+WT M
Sbjct: 180 GLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAM 239
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ GY ++ R EA ELF MP K V MI GF G + AR +F++++ KD +
Sbjct: 240 LKGYTRSGRINEAAELFKAMPV--KPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGT 297
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
++A+I Y + G EAL LFS M + ++P+ +++S+ + C +L L+ GRQ H ++
Sbjct: 298 WSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLV 357
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
R+ F+ ++ V + +ITMY +CG ++ + F + S ++V WN+IIA +AQHG EKAL
Sbjct: 358 RSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALE 417
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F +M +G PD ITF+ +LSACG+ GKV E +++FE M Y + +EHY C+VD+L
Sbjct: 418 VFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLL 477
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
RAG+L +A + + MP EAD VWG+LL+AC + N++L E+AAKK+ +L+P ++ Y+
Sbjct: 478 GRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYI 537
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL-GGDMSHPCIDKIH 570
+LSNLYA+ W+DV +R M+ + V+K SWIE+ NKVH F GG SHP + I
Sbjct: 538 LLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIM 597
Query: 571 LELKRASVQMK 581
+L++ ++
Sbjct: 598 KKLEKLGASLR 608
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/545 (41%), Positives = 346/545 (63%), Gaps = 16/545 (2%)
Query: 55 AKISALSRAGKISAARQLFDQMTT-KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
A IS + G I AR+LFD++ KDV+TW A+++GY + ++E++ LF+ MPVKN+V
Sbjct: 11 AVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERLFEVMPVKNVV 70
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN MI G N +D A + F+ M ERN ++NA+I+ ++ GR+EEA R F++MP+R+
Sbjct: 71 SWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRD 130
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
VIS+T M+ G + G VD+AR + D M +NVVSW M+TGY KN R EA +LF RMP+
Sbjct: 131 VISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDLFERMPE 190
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+N+ MITGF + G L AR +F + K+ VS+ MI GY Q G +E AL++F
Sbjct: 191 --RNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESALKVFV 248
Query: 294 GMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
MIK +P++ T V+V ACS + L EG+Q H+L+ ++ ++ V +A++ MYS+C
Sbjct: 249 EMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKC 308
Query: 353 GGILDSELAFRQ--IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
G + + F I +LV WN +IAA+A HG +A+ F M GF P+ ++++
Sbjct: 309 GELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVE 368
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
LLSAC HAG V+E ++ F+ + + I +H+ CLVD+ RAG+L++A+ + + +
Sbjct: 369 LLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTK 428
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
A + +WG LLA C + ++E+G+LAAK++ + DP+N+ Y++LSN+YA+ WR+ +RVR
Sbjct: 429 ASSSIWGGLLAGCNAHGDLEIGQLAAKELEKEDPENAGTYLLLSNIYASGRKWREASRVR 488
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH-------PCIDKIHLELKRASVQMKSV 583
L MKE+G+ KQ SWIE+GN+VH FL D SH + IH E+K V
Sbjct: 489 LKMKEKGLKKQPGCSWIEVGNRVHVFLARDKSHYQSNLIYSLVHDIHAEMKAEHVPN--- 545
Query: 584 DDFVE 588
+DFV+
Sbjct: 546 NDFVD 550
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 212/439 (48%), Gaps = 44/439 (10%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L + + V N I + ++ A ++F++M +++++WNA+I Q G ++E+
Sbjct: 60 LFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEA 119
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ F MP ++++SW M+ G + R+D+A F MPERN ++NAM++G+ K+ RL+
Sbjct: 120 RRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLD 179
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
EA LFE+MP RN+ S+ M+ GF++ GE+ AR + + M KNVVSWT MITGYV+
Sbjct: 180 EAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGE 239
Query: 221 FCEARELFYRM-------PD-------------------------------YDKNVFVVT 242
A ++F M P+ Y FV +
Sbjct: 240 SESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVAS 299
Query: 243 AMITGFCKVGMLENARLLFER--IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
A++ + K G L AR +F+ I +D V +N MIA YA +G EA+ LF M +
Sbjct: 300 ALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGF 359
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSE 359
+P+D + V + +ACS L++EG + R N + ++ + R G + ++
Sbjct: 360 KPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAY 419
Query: 360 LAFRQIHSPNLVS-WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+Q+ + S W ++A HG E + + L DP+ LLS +
Sbjct: 420 DFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKE--LEKEDPENAGTYLLLSNIYAS 477
Query: 419 GKVNESMDLFELMVKVYGI 437
G+ L +K G+
Sbjct: 478 GRKWREASRVRLKMKEKGL 496
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/531 (38%), Positives = 343/531 (64%), Gaps = 4/531 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + G ++++ + F+++ + ++W ++ G+ + G + E++ LF MP++N+V
Sbjct: 206 NLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVV 265
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+WN MIA + N +D+A F MPE+N+ ++ +I+G+++ G+L+EA +L QMP RN
Sbjct: 266 AWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN 325
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V + TAM+ G+++ +D AR + + +S ++VV W MI GY + R EA LF +M
Sbjct: 326 VAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM-- 383
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
K++ M+ + +VG ++ A +FE ++ K+ VS+N++I+G QNG +AL+ F
Sbjct: 384 VKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFM 443
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M +PD +T ++C+ L L G+Q H LV+++G+ ++ V NA+ITMY++CG
Sbjct: 444 LMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCG 503
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I +EL F+ I ++VSWN++IAA+A +G+ +AL F +M + G PD +TF+ +LS
Sbjct: 504 SISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILS 563
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H G +++ + LF+ MV+ Y I P +EHY C+VD+L RAG+LE+A+Q+ +GM A+
Sbjct: 564 ACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANA 623
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
G+WG+LL AC I+ N+EL + AA+K+ E +P ++ YV+LSN+ A AG W +V RVR LM
Sbjct: 624 GIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLM 683
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP-CIDKIHLELKRASVQMKSV 583
KE+G KQ +SWIE+ N+VH FL D +HP ++ H+ L+ + M++
Sbjct: 684 KEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHI-LRSLTAHMRNT 733
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 252/531 (47%), Gaps = 100/531 (18%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
YVF +N KI+ L ++G+I A ++F MT K+ +T N++I+ + +NG + +++ LF MP
Sbjct: 14 YVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMP 73
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY---------------------- 146
+NIVSWN MIA + NDR+++A F MP R+ ++
Sbjct: 74 QRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNL 133
Query: 147 ----------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
NAM++G+ K+ + +EA RLF+ MP ++++S+ +ML G+ + GE+
Sbjct: 134 LPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQF 193
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+ M+ ++VVSW +M+ G+V+ + E F ++P + N M+ GF + G +
Sbjct: 194 FEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIP--NPNTVSWVTMLCGFARFGKIAE 251
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA----TLVSVFT 312
AR LF+++ ++ V++NAMIA Y QN +EA+ LF M+M ++ T+++ +
Sbjct: 252 ARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLF-----MEMPEKNSISWTTVINGYV 306
Query: 313 ACSAL----QLLNE-------------------GRQSHVLVIRNGFEANVSVC-NAVITM 348
L QLLN+ R I N VC N +I
Sbjct: 307 RMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAG 366
Query: 349 YSRCG------------------------------GILDSELA-FRQIHSPNLVSWNTII 377
YS+CG G +D+ + F ++ N+VSWN++I
Sbjct: 367 YSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLI 426
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
+ Q+G Y AL F MG G PD TF LS+C H + L +L++K G
Sbjct: 427 SGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKS-GY 485
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
L+ + ++ G + A + + + D W SL+AA +N N
Sbjct: 486 ATDLFVSNALITMYAKCGSISSAELLFKDID-HFDVVSWNSLIAAYALNGN 535
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 186/392 (47%), Gaps = 44/392 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V A IS + ++ ARQ+F+Q++ +DV+ WN +I GY Q G + E+ +LF+ M
Sbjct: 326 VAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVK 385
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K+IVSWN M+A ++D A F+ M E+N ++N++ISG ++G +A + F M
Sbjct: 386 KDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLM 445
Query: 170 ----PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
+ + ++ L + + L VM +GY A
Sbjct: 446 GHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQL----------VMKSGY--------AT 487
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+LF V A+IT + K G + +A LLF+ I D VS+N++IA YA NG
Sbjct: 488 DLF-----------VSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNG 536
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCNA 344
EAL+LF M + PD+ T V + +ACS + L+++G + +V E
Sbjct: 537 REALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYAC 596
Query: 345 VITMYSRCGGILDSELAFRQIH----SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
++ + R G + E AF+ + + N W ++ A HG+ E L F+ L
Sbjct: 597 MVDLLGRAGRL---EEAFQLVRGMKINANAGIWGALLGACRIHGNLE--LAKFAAEKLLE 651
Query: 401 FDPDGITFLSLLSAC-GHAGKVNESMDLFELM 431
F+P + LLS AG+ +E + LM
Sbjct: 652 FEPHKTSNYVLLSNMQAEAGRWDEVARVRRLM 683
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 151/339 (44%), Gaps = 45/339 (13%)
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
++ VF IT K G ++ A +F+ + K+ V+ N+MI+ +A+NG +A +LF
Sbjct: 10 EHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLF 69
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-----------SHVLVI----RNG--- 334
GM + ++ + S+ A + E RQ S L+I RNG
Sbjct: 70 DGMPQRNI----VSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELA 125
Query: 335 ----------FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
++ N CNA++ Y++ ++ F + + +LVSWN+++ + ++G
Sbjct: 126 KARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNG 185
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
L FF +M + D +++ ++ G +N S + FE + P++ +
Sbjct: 186 EMRLGLQFFEEMA----ERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPN-----PNTVSW 236
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
++ +R G++ +A ++ MP + W +++AA V N +V + A E+
Sbjct: 237 VTMLCGFARFGKIAEARRLFDQMPIR-NVVAWNAMIAAYVQNCHV---DEAISLFMEMPE 292
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
+NS + + N Y G + ++ M + V Q A
Sbjct: 293 KNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTA 331
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/543 (40%), Positives = 340/543 (62%), Gaps = 16/543 (2%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK-NI 112
N I+ LS+ G+I AR+LFD+M DVITW +I+GY + G ++E++ LF + K N+
Sbjct: 71 NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNV 130
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
V+W M+ G I +++I DA F MP +N ++N MI G+ ++GR++ A LFE+MP R
Sbjct: 131 VTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPER 190
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
NV+S+ ++ + G +++AR L D M ++V+SWT MI G + EA +LF RMP
Sbjct: 191 NVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLD-----EALDLFERMP 245
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+ D + MITG + G L AR LF + K+ +S+ MI G Q G +EEAL++F
Sbjct: 246 ERDLPSW--NTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIF 303
Query: 293 SGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
S M+ + +P+ T VSV ACS L L EG+Q H ++ + ++ + V +A+I MYS+
Sbjct: 304 SRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSK 363
Query: 352 CGGILDSELAFRQ--IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
CG + + F +LVSWN IIAA+A HG+ ++A+ FF +M +GF PD +T++
Sbjct: 364 CGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYV 423
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
LLSAC HAG V E + F+ +VK I+ +HY CLVD+ RAG+L++A+ + +
Sbjct: 424 GLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLET 483
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ VWG+LLA C ++ NV++G+ AAKK+ E++P+N+ Y++LSN+YA+ G WR+ RV
Sbjct: 484 KPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARV 543
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV-----D 584
RL MK++G+ KQ SWIE+GN+VH F+ GD SH I+ L+ +MK +
Sbjct: 544 RLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPNN 603
Query: 585 DFV 587
DF+
Sbjct: 604 DFI 606
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 193/393 (49%), Gaps = 63/393 (16%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
R+ + + V A + R+ KIS A +LF++M K+V++WN +I GY QNG + +
Sbjct: 123 RVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMY 182
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
LF+ MP +N+VSWN +++ RI++A F MPER+ ++ AMI+G L+EA
Sbjct: 183 LFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGL-----LDEA 237
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
LFE+MP R++ S+ M+ G ++ G++ +AR L + M KNV+SWT MITG V+
Sbjct: 238 LDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESE 297
Query: 223 EARELFYRM-------PD-------------------------------YDKNVFVVTAM 244
EA ++F RM P+ Y + FVV+A+
Sbjct: 298 EALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSAL 357
Query: 245 ITGFCKVGMLENARLLFER--IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
I + K G L AR +F+ +D VS+N +IA YA +G +EA+ F M K +P
Sbjct: 358 INMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKP 417
Query: 303 DDATLVSVFTACSALQLLNEG--------RQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
DD T V + +ACS L+ EG + +LV + + V +C G
Sbjct: 418 DDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGR--------AG 469
Query: 355 ILDSELAF--RQIHSPNLVSWNTIIAAFAQHGH 385
L F R P+ W ++A H +
Sbjct: 470 RLKEAFGFIERLETKPSARVWGALLAGCNVHAN 502
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 191/345 (55%), Gaps = 21/345 (6%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM- 200
N A N MI+ K GR+ EA RLF++M +VI++T ++ G++K G +++AR L D +
Sbjct: 66 NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 125
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
+ KNVV+WT M+ GY+++ + +A +LF MP +KNV MI G+ + G +++A L
Sbjct: 126 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMP--NKNVVSWNTMIDGYAQNGRIDSAMYL 183
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
FE++ ++ VS+N +++ AQ G EEA RLF M + D V +TA A LL
Sbjct: 184 FEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERD--------VISWTAMIA-GLL 234
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+E + + E ++ N +IT + G + + F ++ N++SW T+I
Sbjct: 235 DEA----LDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGC 290
Query: 381 AQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-VYGII 438
Q G E+AL FS+M NG P+ TF+S+L AC + + E + +++ K VY
Sbjct: 291 VQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQ-- 348
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQI-TQGMPFEADTGVWGSLLAA 482
S+ + L+++ S+ G+L A ++ GM + D W ++AA
Sbjct: 349 DSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAA 393
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 125/257 (48%), Gaps = 36/257 (14%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D NV MIT K G + AR LF+ ++ D +++ +I+GY + G+ EEA RLF
Sbjct: 64 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFD- 122
Query: 295 MIKMDMQPDDATLVSVFTA-------CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
++D + + T ++ A +L NE NV N +I
Sbjct: 123 --RVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNK-----------NVVSWNTMID 169
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
Y++ G I + F ++ N+VSWNT+++ AQ G E+A F +M + D I+
Sbjct: 170 GYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMP----ERDVIS 225
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+ +++ AG ++E++DLFE M + +PS + ++ L + G L +A ++ M
Sbjct: 226 WTAMI-----AGLLDEALDLFERMPERD--LPS---WNTMITGLIQNGDLRRARKLFNEM 275
Query: 468 PFEADTGVWGSLLAACV 484
P + + W +++ CV
Sbjct: 276 P-KKNVISWTTMITGCV 291
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/541 (39%), Positives = 334/541 (61%), Gaps = 2/541 (0%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L L + V NA +S ++ G + AR++F++M ++ I+WN ++ Y NG L+E+
Sbjct: 130 LFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEA 189
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ LF+S ++SWNC++ G + + + DA F MP R+ ++N MISG+ + G L
Sbjct: 190 RRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLS 249
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+A RLF + P R+V ++TAM+ G+++ G VD+AR D M KN +S+ M+ GYV+ ++
Sbjct: 250 QAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKK 309
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
A ELF MP +N+ MITG+ + G + AR LF+ + +DCVS+ A+I+GYA
Sbjct: 310 MVIAGELFEAMPC--RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYA 367
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
QNG EEAL +F M + + +T + C+ + L G+Q H V++ GFE
Sbjct: 368 QNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCF 427
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V NA++ MY +CG ++ F I ++VSWNT+IA +A+HG +AL+ F M G
Sbjct: 428 VGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAG 487
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
PD IT + +LSAC H+G ++ + F M + Y + P+S+HYTC++D+L RAG+LE+A
Sbjct: 488 VKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEA 547
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
+ + MPF+ WG+LL A I+ N ELGE AA+ + +++PQNS +YV+LSNLYAA+
Sbjct: 548 ENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAAS 607
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
G W DV ++R M+E GV K YSW+E+ NK+H F GD HP D+I+ L+ ++M
Sbjct: 608 GRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKM 667
Query: 581 K 581
+
Sbjct: 668 R 668
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/468 (29%), Positives = 239/468 (51%), Gaps = 37/468 (7%)
Query: 25 STPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITW 84
S S +++P S F + N IS+ R G +A ++F+ M + +++
Sbjct: 26 SKRRSTNSYSPSSVK-----FKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSY 80
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
NA+I+GY +N +++LF MP +++ SWN M+ G + N R+ +A F MP+++
Sbjct: 81 NAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVV 140
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
++NAM+SG+ ++G ++EA +F +MP RN IS+ +L ++ G + +AR L + S
Sbjct: 141 SWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWE 200
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
++SW ++ GYVK +AR+LF RMP D V MI+G+ +VG L A+ LF
Sbjct: 201 LISWNCLMGGYVKRNMLGDARQLFDRMPVRD--VISWNTMISGYAQVGDLSQAKRLFNES 258
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+D ++ AM++GY QNG+ +EA + F M + +A L +
Sbjct: 259 PIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYV------------Q 306
Query: 325 QSHVLVIRNGFEA----NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+++ FEA N+S N +IT Y + GGI + F + + VSW II+ +
Sbjct: 307 YKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGY 366
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
AQ+GHYE+AL F +M +G + TF LS C + EL +V+G +
Sbjct: 367 AQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCA-------DIAALELGKQVHGQVVK 419
Query: 441 SEHYT------CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ T L+ + + G ++A + +G+ E D W +++A
Sbjct: 420 AGFETGCFVGNALLGMYFKCGSTDEANDVFEGIE-EKDVVSWNTMIAG 466
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ + D V++N I+ + +NG + ALR+F+ M + +A +
Sbjct: 40 KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYL----------- 88
Query: 323 GRQSHVLVIRNGF----EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
R + + R+ F E ++ N ++T Y R + ++ F + ++VSWN +++
Sbjct: 89 -RNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLS 147
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+AQ+G ++A F++M + I++ LL+A H G++ E+ LFE + +I
Sbjct: 148 GYAQNGFVDEAREVFNKMP----HRNSISWNGLLAAYVHNGRLKEARRLFESQSN-WELI 202
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA-AK 497
+ CL+ + L A Q+ MP D W ++++ ++G+L+ AK
Sbjct: 203 S----WNCLMGGYVKRNMLGDARQLFDRMPVR-DVISWNTMISGY-----AQVGDLSQAK 252
Query: 498 KMRELDP-QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYS 545
++ P ++ + + + Y GM V R E V + +Y+
Sbjct: 253 RLFNESPIRDVFTWTAMVSGYVQNGM---VDEARKYFDEMPVKNEISYN 298
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/528 (40%), Positives = 338/528 (64%), Gaps = 2/528 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N +S ++ G + AR++FD+M K+ ++WNA+++ Y QN L+E+ LF S +V
Sbjct: 156 NTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALV 215
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWNC++ G + +I +A +F +M R+ ++N +I+G+ ++G ++EA +LF++ P +
Sbjct: 216 SWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHD 275
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++TAM+ G+++ V++AR L D M +N VSW M+ GYV+ ER A+ELF MP
Sbjct: 276 VFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPC 335
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+NV MITG+ + G + A+ LF+++ +D VS+ AMIAGY+Q+G + EALRLF
Sbjct: 336 --RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFV 393
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + + ++ S + C+ + L G+Q H +++ G+E V NA++ MY +CG
Sbjct: 394 LMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 453
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ F+++ ++VSWNT+IA +++HG E+AL FF M G PD T +++LS
Sbjct: 454 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLS 513
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H G V++ F M + YG+ P+S+HY C+VD+L RAG LE+A + + MPFE D
Sbjct: 514 ACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDA 573
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+WG+LL A ++ N EL E AA K+ ++P+NS +YV+LSNLYA++G W DV ++R+ M
Sbjct: 574 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRM 633
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+++GV K YSWIEI NK H F GD HP D+I L+ ++MK
Sbjct: 634 RDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMK 681
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 199/403 (49%), Gaps = 52/403 (12%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTT-------KDVITWNAIITGYWQNGFLQESKNLFQ 105
NNA ++ + K S Q+ T D+ WN I+ Y + G E+ +F+
Sbjct: 24 NNANSASNFHSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFK 83
Query: 106 SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
MP + VS+N MI+G + N + A F MPER+ ++N MI G++++ L +A L
Sbjct: 84 RMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKAREL 143
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
FE+MP R+V S+ +L G+ + G VD AR + D M KN VSW +++ YV+N + EA
Sbjct: 144 FERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEAC 203
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
LF ++ + ++ GF K + AR F+ ++ +D VS+N +I GYAQNG
Sbjct: 204 VLFGSRENW--ALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEI 261
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSAL------QLLNEGRQ-------------- 325
+EA +LF D++ + VFT + + +++ E R+
Sbjct: 262 DEARQLF----------DESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWN 311
Query: 326 ---------SHVLVIRNGFEA----NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
V + + F+ NVS N +IT Y++CG I +++ F ++ + VS
Sbjct: 312 AMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 371
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
W +IA ++Q GH +AL F M G + +F S LS C
Sbjct: 372 WAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTC 414
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 158/351 (45%), Gaps = 45/351 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF A +S + + AR+LFD+M ++ ++WNA++ GY Q ++ +K LF MP
Sbjct: 276 VFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPC 335
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+N+ +WN MI G +I +A + F MP+R+ ++ AMI+G+ + G EA RLF M
Sbjct: 336 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLM 395
Query: 170 PRR----NVISYTAMLDG-----FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
R N S+++ L ++ G+ R + V ++ Y K
Sbjct: 396 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG-NALLLMYCKCGS 454
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
EA +LF M K++ MI G+ + G E A FE
Sbjct: 455 IEEANDLFKEMA--GKDIVSWNTMIAGYSRHGFGEEALRFFE------------------ 494
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANV 339
M + ++PDDAT+V+V +ACS L+++GRQ H + G N
Sbjct: 495 -------------SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNS 541
Query: 340 SVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKA 389
++ + R G + ++ + + P+ W T++ A HG+ E A
Sbjct: 542 QHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 592
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/528 (39%), Positives = 338/528 (64%), Gaps = 2/528 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N +S ++ G + AR +FD+M K+ ++WNA+++ Y QN ++E+ LF+S +V
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV 220
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWNC++ G + +I +A +F +M R+ ++N +I+G+ + G+++EA +LF++ P ++
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++TAM+ G+++ V++AR L D M +N VSW M+ GYV+ ER A+ELF MP
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPC 340
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+NV MITG+ + G + A+ LF+++ +D VS+ AMIAGY+Q+G + EALRLF
Sbjct: 341 --RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + + ++ S + C+ + L G+Q H +++ G+E V NA++ MY +CG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ F+++ ++VSWNT+IA +++HG E AL FF M G PD T +++LS
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H G V++ F M + YG++P+S+HY C+VD+L RAG LE A + + MPFE D
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+WG+LL A ++ N EL E AA K+ ++P+NS +YV+LSNLYA++G W DV ++R+ M
Sbjct: 579 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRM 638
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+++GV K YSWIEI NK H F GD HP D+I L+ ++MK
Sbjct: 639 RDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMK 686
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 229/475 (48%), Gaps = 59/475 (12%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ WN I+ Y + G E+ +F+ MP + VS+N MI+G + N + A F MP
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
ER+ ++N MI G++++ L +A LFE MP R+V S+ ML G+ + G VD AR++ D
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------------------------ 235
M KN VSW +++ YV+N + EA LF ++
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 236 -----KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
++V +ITG+ + G ++ AR LF+ +D ++ AM++GY QN + EEA
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
LF M + + +A L + +++ E V+ R NVS N +IT Y+
Sbjct: 303 LFDKMPERNEVSWNAMLAG-YVQGERMEMAKE--LFDVMPCR-----NVSTWNTMITGYA 354
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG I +++ F ++ + VSW +IA ++Q GH +AL F QM G + +F S
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT-CLVD-----ILSRAGQLEKAWQIT 464
LS C + EL +++G + + T C V + + G +E+A +
Sbjct: 415 ALSTCA-------DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAK-----KMRELDPQNSAVYVMLS 514
+ M + D W +++A + GE+A + K L P ++ + +LS
Sbjct: 468 KEMAGK-DIVSWNTMIAGYSRH---GFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 181/346 (52%), Gaps = 31/346 (8%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q VF A +S + + AR+LFD+M ++ ++WNA++ GY Q ++ +K LF M
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFE 167
P +N+ +WN MI G +I +A + F MP+R+ ++ AMI+G+ + G EA RLF
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
QM R + G ++++ S + +VV+ + ++L
Sbjct: 399 QMER--------------EGGRLNRSSFSSALSTCADVVALEL-------------GKQL 431
Query: 228 FYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
R+ Y+ FV A++ +CK G +E A LF+ + KD VS+N MIAGY+++G
Sbjct: 432 HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFG 491
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNA 344
E ALR F M + ++PDDAT+V+V +ACS L+++GRQ + ++ G N
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 345 VITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKA 389
++ + R G + D+ + + P+ W T++ A HG+ E A
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 122/267 (45%), Gaps = 18/267 (6%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D ++ I+ + + G A +F+R+ VS+N MI+GY +NG E A +LF
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + D+ + + ++ N G+ + I E +V N +++ Y++ G
Sbjct: 121 MPERDLVSWNVMIKGY------VRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNGC 172
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ D+ F ++ N VSWN +++A+ Q+ E+A + F +++ LL
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGG 228
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
K+ E+ F+ M V ++ + ++ +++G++++A Q+ P + D
Sbjct: 229 FVKKKKIVEARQFFDSM-NVRDVVS----WNTIITGYAQSGKIDEARQLFDESPVQ-DVF 282
Query: 475 VWGSLLAACVINLNVELGELAAKKMRE 501
W ++++ + N VE KM E
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPE 309
>gi|359497691|ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 317
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/316 (64%), Positives = 257/316 (81%)
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
YAQNG EEAL+L S M+KM MQPD +TLVSV TACS+L L EGR++HVLV+++G+E++
Sbjct: 1 YAQNGSGEEALKLHSQMLKMGMQPDHSTLVSVLTACSSLASLQEGRKTHVLVLKSGYESH 60
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+S+CNA+ITMY +CG ILDSELAFRQI P++VSWN +IAAFA+HG Y++AL F +M
Sbjct: 61 ISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRS 120
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
N +PDGITFLSLLSACGHAGKV+ES++ F M+K Y I+ EH+ CLVDILSR GQ+E
Sbjct: 121 NRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIKSYKIVARPEHFACLVDILSRGGQVE 180
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
KA++I Q MPFEAD G+WG+LLAAC ++LNV+LGELAAKK+ EL+PQNS YV+LSN+YA
Sbjct: 181 KAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYA 240
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASV 578
AAGMW +VTRVR LM+EQGV KQ AYSW+EI NKVH+FLG D SHP I +I LELK +
Sbjct: 241 AAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEIHRIRLELKGMKL 300
Query: 579 QMKSVDDFVEIATSWS 594
QM + DD E+ ++ S
Sbjct: 301 QMIADDDIEEVFSACS 316
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 39/224 (17%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y+ ++ + A+IT +CK G + ++ L F +I D VS+NAMIA +A++G + AL F
Sbjct: 57 YESHISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFG 116
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M ++PD T +S+ +AC G V N F N++I Y
Sbjct: 117 EMRSNRVEPDGITFLSLLSAC--------GHAGKVHESLNWF-------NSMIKSY---- 157
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
++ R H LV ++ G EKA +M F+ D + +LL+
Sbjct: 158 -----KIVARPEHFACLVD------ILSRGGQVEKAYKIIQEM---PFEADCGIWGALLA 203
Query: 414 ACGHAGKVNESMDLFELMV-KVYGIIP-SSEHYTCLVDILSRAG 455
AC V+ ++ L EL K+ + P +S Y L +I + AG
Sbjct: 204 AC----HVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAG 243
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
++ + NA I+ + G I + F Q+ DV++WNA+I + ++GF + F M
Sbjct: 60 HISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMR 119
Query: 109 VKNI----VSWNCMIAGCIDNDRIDDAFDYFQAM---------PERNTATYNAMISGFLK 155
+ +++ +++ C ++ ++ ++F +M PE + ++ +
Sbjct: 120 SNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIKSYKIVARPEH----FACLVDILSR 175
Query: 156 HGRLEEATRLFEQMP 170
G++E+A ++ ++MP
Sbjct: 176 GGQVEKAYKIIQEMP 190
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 338/563 (60%), Gaps = 33/563 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N ++ R ++ AR+LFD M KDV++WN++++GY QNG++ E++ +F +MP
Sbjct: 111 LFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE 170
Query: 110 KN-------------------------------IVSWNCMIAGCIDNDRIDDAFDYFQAM 138
KN ++SWNC++ G + ++ DA F M
Sbjct: 171 KNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM 230
Query: 139 PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD 198
P R+ ++N MISG+ + G L +A RLF++ P R+V ++TAM+ G+++ G +D+A+ D
Sbjct: 231 PVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFD 290
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
M KN VS+ MI GYV+ ++ ARELF MP +N+ MITG+ ++G + AR
Sbjct: 291 EMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPC--RNISSWNTMITGYGQIGDIAQAR 348
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
F+ + +DCVS+ A+IAGYAQ+G EEAL +F + + + AT + C+ +
Sbjct: 349 KFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L G+Q H ++ G+ V NA++ MY +CG I ++ F I ++VSWNT++A
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA 468
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+A+HG +AL F M G PD IT + +LSAC H G ++ + F M K YG+I
Sbjct: 469 GYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVI 528
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
P+S+HYTC++D+L RAG+LE+A + + MPF+ WG+LL A I+ N ELGE AA+
Sbjct: 529 PTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEM 588
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ +++PQNS +YV+LSNLYAA+G W D ++R M++ GV K YSW+E+ NK+H F
Sbjct: 589 VFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSV 648
Query: 559 GDMSHPCIDKIHLELKRASVQMK 581
GD SHP ++I+ L+ ++M+
Sbjct: 649 GDCSHPEKERIYAYLEELDLKMR 671
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 218/426 (51%), Gaps = 27/426 (6%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D++ WN I+ + +NG + ++F +MP ++ VS+N MI+G + N + + A + F MP
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
ER+ ++N M++G++++ RL +A RLF+ MP ++V+S+ ++L G+ + G VD+AR + D
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M KN +SW ++ YV N R EA LF D+D + ++ GF + L +AR
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWD--LISWNCLMGGFVRKKKLGDARW 225
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF---------------SGMIKMDMQPDD 304
LF+++ +D +S+N MI+GYAQ G +A RLF SG ++ M +
Sbjct: 226 LFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEA 285
Query: 305 ATLVSVFTACSALQ----LLNEGRQSHVLVIRNGFEA----NVSVCNAVITMYSRCGGIL 356
T + + + + + + R FE+ N+S N +IT Y + G I
Sbjct: 286 KTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIA 345
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F + + VSW IIA +AQ GHYE+AL F ++ +G + TF LS C
Sbjct: 346 QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
+ + VK+ G L+ + + G +++A +G+ E D W
Sbjct: 406 DIAALELGKQIHGQAVKM-GYGTGCFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVSW 463
Query: 477 GSLLAA 482
++LA
Sbjct: 464 NTMLAG 469
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 132/606 (21%), Positives = 238/606 (39%), Gaps = 163/606 (26%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF----QSMPV 109
N I+ + G I+ AR+ FD M +D ++W AII GY Q+G +E+ N+F Q
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391
Query: 110 KNIVSWNCMIAGCID-----------------------------------NDRIDDAFDY 134
N ++ C ++ C D ID+A D
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDT 451
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS------------------ 176
F+ + E++ ++N M++G+ +HG +A +FE M V
Sbjct: 452 FEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLL 511
Query: 177 ----------------------YTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMIT 213
YT M+D + G +++A+ L M F+ SW ++
Sbjct: 512 DRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLG 571
Query: 214 G---YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ E +A E+ ++M + ++V+ + + + G +A + +++
Sbjct: 572 ASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNL--YAASGRWVDADKMRSKMRDIGV- 628
Query: 271 SFNAMIAGYA----QNGVA---------EEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
+ GY+ QN + E R+++ + ++D++ + VS+ L
Sbjct: 629 ---QKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKL--VL 683
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS-RCGGILDSELAFRQIHSP-----NLV 371
+ E + H+L + ++V ++T+ R ++ + HS +V
Sbjct: 684 HDVEEEEKEHMLKYHS---EKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIV 740
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL-LSACGHAGKVNESMDLFEL 430
I+ + H+ + GF G +L L + G ++ + F
Sbjct: 741 GRLIILRDSHRFHHFNE-----------GFCSCGDYWLQFFLLVVIYTGLLDTGAEYFYP 789
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M + Y + P+S+HYTC++D+L R +LE+ G+LL A I+ N E
Sbjct: 790 MNEEYSVTPTSKHYTCMIDLLGRVDRLEE-----------------GALLGASRIHGNTE 832
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
LGE AA+ ++ PQNS + M RDV GV K YSW E+
Sbjct: 833 LGEKAAQMFFKMGPQNSGISKM-----------RDV----------GVQKVPGYSWFEVQ 871
Query: 551 NKVHYF 556
NK+H F
Sbjct: 872 NKIHTF 877
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 24/256 (9%)
Query: 232 PDYDK-NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
PD K N + T M G C ++A +F + + VS+NAMI+GY +N A
Sbjct: 47 PDILKWNKAISTHMRNGHC-----DSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARN 101
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
LF M + D+ + L C L + R+ L+ E +V N++++ Y+
Sbjct: 102 LFDQMPERDLFSWNVMLTGYVRNCR----LGDARRLFDLMP----EKDVVSWNSLLSGYA 153
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+ G + ++ F + N +SWN ++AA+ +G E+A + F D D I++
Sbjct: 154 QNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKS----DWDLISWNC 209
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
L+ K+ ++ LF+ M + + + ++ ++ G L +A ++ P
Sbjct: 210 LMGGFVRKKKLGDARWLFDKMP-----VRDAISWNTMISGYAQGGGLSQARRLFDESPTR 264
Query: 471 ADTGVWGSLLAACVIN 486
D W ++++ V N
Sbjct: 265 -DVFTWTAMVSGYVQN 279
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 338/563 (60%), Gaps = 33/563 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N ++ R ++ AR+LFD M KDV++WN++++GY QNG++ E++ +F +MP
Sbjct: 111 LFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE 170
Query: 110 KN-------------------------------IVSWNCMIAGCIDNDRIDDAFDYFQAM 138
KN ++SWNC++ G + ++ DA F M
Sbjct: 171 KNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM 230
Query: 139 PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD 198
P R+ ++N MISG+ + G L +A RLF++ P R+V ++TAM+ G+++ G +D+A+ D
Sbjct: 231 PVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFD 290
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
M KN VS+ MI GYV+ ++ ARELF MP +N+ MITG+ ++G + AR
Sbjct: 291 EMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPC--RNISSWNTMITGYGQIGDIAQAR 348
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
F+ + +DCVS+ A+IAGYAQ+G EEAL +F + + + AT + C+ +
Sbjct: 349 KFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L G+Q H ++ G+ V NA++ MY +CG I ++ F I ++VSWNT++A
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA 468
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+A+HG +AL F M G PD IT + +LSAC H G ++ + F M K YG+I
Sbjct: 469 GYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVI 528
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
P+S+HYTC++D+L RAG+LE+A + + MPF+ WG+LL A I+ N ELGE AA+
Sbjct: 529 PTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEM 588
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ +++PQNS +YV+LSNLYAA+G W D ++R M++ GV K YSW+E+ NK+H F
Sbjct: 589 VFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSV 648
Query: 559 GDMSHPCIDKIHLELKRASVQMK 581
GD SHP ++I+ L+ ++M+
Sbjct: 649 GDCSHPEKERIYAYLEELDLKMR 671
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 218/426 (51%), Gaps = 27/426 (6%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D++ WN I+ + +NG + ++F +MP ++ VS+N MI+G + N + + A + F MP
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
ER+ ++N M++G++++ RL +A RLF+ MP ++V+S+ ++L G+ + G VD+AR + D
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M KN +SW ++ YV N R EA LF D+D + ++ GF + L +AR
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWD--LISWNCLMGGFVRKKKLGDARW 225
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF---------------SGMIKMDMQPDD 304
LF+++ +D +S+N MI+GYAQ G +A RLF SG ++ M +
Sbjct: 226 LFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEA 285
Query: 305 ATLVSVFTACSALQ----LLNEGRQSHVLVIRNGFEA----NVSVCNAVITMYSRCGGIL 356
T + + + + + + R FE+ N+S N +IT Y + G I
Sbjct: 286 KTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIA 345
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F + + VSW IIA +AQ GHYE+AL F ++ +G + TF LS C
Sbjct: 346 QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
+ + VK+ G L+ + + G +++A +G+ E D W
Sbjct: 406 DIAALELGKQIHGQAVKM-GYGTGCFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVSW 463
Query: 477 GSLLAA 482
++LA
Sbjct: 464 NTMLAG 469
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 24/256 (9%)
Query: 232 PDYDK-NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
PD K N + T M G C ++A +F + + VS+NAMI+GY +N A
Sbjct: 47 PDILKWNKAISTHMRNGHC-----DSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARN 101
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
LF M + D+ + L C L + R+ L+ E +V N++++ Y+
Sbjct: 102 LFDQMPERDLFSWNVMLTGYVRNCR----LGDARRLFDLMP----EKDVVSWNSLLSGYA 153
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+ G + ++ F + N +SWN ++AA+ +G E+A + F D D I++
Sbjct: 154 QNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKS----DWDLISWNC 209
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
L+ K+ ++ LF+ M + + + ++ ++ G L +A ++ P
Sbjct: 210 LMGGFVRKKKLGDARWLFDKMP-----VRDAISWNTMISGYAQGGGLSQARRLFDESPTR 264
Query: 471 ADTGVWGSLLAACVIN 486
D W ++++ V N
Sbjct: 265 -DVFTWTAMVSGYVQN 279
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/534 (40%), Positives = 331/534 (61%), Gaps = 6/534 (1%)
Query: 57 ISALSRAGKISAARQLFDQM-TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
I+ + G I AR+LFD+ K+V+TW A++ GY + ++E++ LF MP++N+VSW
Sbjct: 39 ITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSW 98
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
N M+ G N A D F+ MPERN ++N +I+ ++ GR+E+A RLF+QM R+V+
Sbjct: 99 NTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVV 158
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
S+T M+ G K G V+ ARAL D M +NVVSW MITGY +N R EA +LF RMP+ D
Sbjct: 159 SWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERD 218
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ MITGF + G L A LF +Q K+ +++ AM+ GY Q+G++EEALR+F M
Sbjct: 219 MPSW--NTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKM 276
Query: 296 IKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ +++P+ T V+V ACS L L EG+Q H ++ + F+ + V +A+I MYS+CG
Sbjct: 277 LATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGE 336
Query: 355 ILDSELAFRQ--IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
+ + F + +L+SWN +IAA+A HG+ ++A+ F++M G + +TF+ LL
Sbjct: 337 LHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLL 396
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
+AC H G V E F+ ++K I +HY CLVD+ RAG+L++A I +G+ E
Sbjct: 397 TACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVP 456
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
VWG+LLA C ++ N ++G+L A+K+ +++PQN+ Y +LSN+YA+ G W++ VR+
Sbjct: 457 LTVWGALLAGCNVHGNADIGKLVAEKILKIEPQNAGTYSLLSNMYASVGKWKEAANVRMR 516
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDF 586
MK+ G+ KQ SWIE+GN V F+ GD H + + L +MK D
Sbjct: 517 MKDMGLKKQPGCSWIEVGNTVQVFVVGDKPHSQYEPLGHLLHDLHTKMKKAGDM 570
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 177/320 (55%), Gaps = 40/320 (12%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + +R G A LF +M ++V++WN IIT Q G +++++ LF M +++V
Sbjct: 99 NTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVV 158
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SW M+AG N R++DA F MP RN ++NAMI+G+ ++ RL+EA +LF++MP R+
Sbjct: 159 SWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERD 218
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-- 231
+ S+ M+ GF++ GE+++A L M KNV++WT M+TGYV++ EA +F +M
Sbjct: 219 MPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLA 278
Query: 232 -----PD--------------------------YDKNVF-----VVTAMITGFCKVGMLE 255
P+ K VF VV+A+I + K G L
Sbjct: 279 TNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELH 338
Query: 256 NARLLFER--IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
AR +F+ + +D +S+N MIA YA +G +EA+ LF+ M ++ + +D T V + TA
Sbjct: 339 TARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTA 398
Query: 314 CSALQLLNEGRQSHVLVIRN 333
CS L+ EG + +++N
Sbjct: 399 CSHTGLVEEGFKYFDEILKN 418
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/588 (37%), Positives = 340/588 (57%), Gaps = 60/588 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA IS R K S AR LFD+M KD+ +WN ++TGY +N L++++ LF SMP K++V
Sbjct: 68 NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVV 127
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFE------ 167
SWN M++G + + +D+A D F MP +N+ ++N +++ +++ GRLEEA RLFE
Sbjct: 128 SWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWE 187
Query: 168 -------------------------QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
Q+P R++IS+ M+ G+ + G++ +AR L +
Sbjct: 188 LISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPV 247
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMP---DYDKNVFVV------------------ 241
++V +WT M+ YV++ EAR +F MP + NV +
Sbjct: 248 RDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEM 307
Query: 242 --------TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
MI+G+C+ G L AR LF+ + +D VS+ A+IAGYAQNG+ EEA+ +
Sbjct: 308 PFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLV 367
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + +T +AC+ + L G+Q H V+R G+E V NA++ MY +CG
Sbjct: 368 EMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCG 427
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ F+ + ++VSWNT++A +A+HG +AL F M G PD IT + +LS
Sbjct: 428 CIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLS 487
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H G + + F M K YGI P+S+HY C++D+L RAG LE+A + + MPFE D
Sbjct: 488 ACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDA 547
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
WG+LL A I+ N+ELGE AA+ + +++P NS +YV+LSNLYAA+G W DV+++RL M
Sbjct: 548 ATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKM 607
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
++ GV K YSW+E+ NK+H F GD HP +I+ L+ ++MK
Sbjct: 608 RQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMK 655
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 230/432 (53%), Gaps = 24/432 (5%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
IS R G A +FD M ++ +++NA+I+GY +N +++LF MP K++ SWN
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWN 99
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
M+ G N R+ DA F +MPE++ ++NAM+SG+++ G ++EA +F++MP +N IS
Sbjct: 100 LMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSIS 159
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+ +L +++ G +++AR L + S ++S ++ GYVK +AR+LF ++P D
Sbjct: 160 WNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRD- 218
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+ MI+G+ + G L AR LFE +D ++ AM+ Y Q+G+ +EA R+F M
Sbjct: 219 -LISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMP 277
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
Q + + + + + ++ GR+ L F N+ N +I+ Y + G +
Sbjct: 278 ----QKREMSYNVMIAGYAQYKRMDMGRE---LFEEMPF-PNIGSWNIMISGYCQNGDLA 329
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F + + VSW IIA +AQ+G YE+A+ +M +G + TF LSAC
Sbjct: 330 QARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACA 389
Query: 417 HAGKVNESMDLFELMVKVYG-IIPSSEHYTC-----LVDILSRAGQLEKAWQITQGMPFE 470
+ EL +V+G ++ + C LV + + G +++A+ + QG+ +
Sbjct: 390 -------DIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHK 442
Query: 471 ADTGVWGSLLAA 482
D W ++LA
Sbjct: 443 -DIVSWNTMLAG 453
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 204/426 (47%), Gaps = 69/426 (16%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T IS +++G + A +F+ MP RN +SY AM+ G+++ + AR L D M
Sbjct: 32 HTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMP 91
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
K++ SW +M+TGY +N R +AR LF MP +K+V AM++G+ + G ++ AR +F
Sbjct: 92 HKDLFSWNLMLTGYARNRRLRDARMLFDSMP--EKDVVSWNAMLSGYVRSGHVDEARDVF 149
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+R+ K+ +S+N ++A Y ++G EEA RLF D L+S
Sbjct: 150 DRMPHKNSISWNGLLAAYVRSGRLEEARRLFE-------SKSDWELIS------------ 190
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
CN ++ Y + + D+ F QI +L+SWNT+I+ +A
Sbjct: 191 --------------------CNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYA 230
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
Q G +A F + + D T+ +++ A G ++E+ +F+ M +
Sbjct: 231 QDGDLSQARRLFEESPVR----DVFTWTAMVYAYVQDGMLDEARRVFDEMPQ-----KRE 281
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA-AKKMR 500
Y ++ ++ +++ ++ + MPF + G W +++ N G+LA A+ +
Sbjct: 282 MSYNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQN-----GDLAQARNLF 335
Query: 501 ELDPQNSAV-YVMLSNLYAAAGMWRDVTRVRLLMKEQG-----VTKQCAYS------WIE 548
++ PQ +V + + YA G++ + + + MK G T CA S +E
Sbjct: 336 DMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALE 395
Query: 549 IGNKVH 554
+G +VH
Sbjct: 396 LGKQVH 401
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/512 (41%), Positives = 322/512 (62%), Gaps = 3/512 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N IS + G +S AR++FD M ++V++W +++ GY +NG + E++ LF MP KN+V
Sbjct: 90 NGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVV 149
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SW M+ G + R+DDA F MPE++ MI G+ + GRL+EA LF++MP+RN
Sbjct: 150 SWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRN 209
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V+++TAM+ G+ + G+VD AR L + M +N VSWT M+ GY + R EA LF MP
Sbjct: 210 VVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPV 269
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
K V V MI GF G ++ AR +F+ ++ +D +++AMI Y + G EAL LF
Sbjct: 270 --KPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFR 327
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + + +L+SV + C +L L+ G+Q H ++R+ F+ ++ V + +ITMY +CG
Sbjct: 328 RMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCG 387
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
++ ++ F + ++V WN++I ++QHG E+AL F M +G PD +TF+ +LS
Sbjct: 388 NLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLS 447
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC ++GKV E ++LFE M Y + P EHY CLVD+L RA Q+ +A ++ + MP E D
Sbjct: 448 ACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDA 507
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
VWG+LL AC ++ ++L E+A +K+ +L+P+N+ YV+LSN+YA G WRDV +R +
Sbjct: 508 IVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKI 567
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGD-MSHP 564
K + VTK SWIE+ KVH F GGD HP
Sbjct: 568 KARSVTKLPGCSWIEVEKKVHMFTGGDSKGHP 599
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 90/178 (50%), Gaps = 14/178 (7%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY---VFVNNAKISALSRAGKISAARQLF 73
FP ++ +LS S + H +L +++ ++V + I+ + G + A+Q+F
Sbjct: 338 FPSLISVLSVCVSLASLD-HGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVF 396
Query: 74 DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRID 129
++ KDV+ WN++ITGY Q+G +E+ N+F M + V++ +++ C + ++
Sbjct: 397 NRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVK 456
Query: 130 DAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTAML 181
+ + F+ M E Y ++ + ++ EA +L E+MP + I + A+L
Sbjct: 457 EGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALL 514
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/528 (38%), Positives = 329/528 (62%), Gaps = 2/528 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N IS+ + G +S AR FD KD ++WN ++ Y +NG ++E++ LF S +++
Sbjct: 135 NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI 194
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN +++G + ++ +A + F MP R+ ++N M+SG+ + G + EA RLF+ P R+
Sbjct: 195 SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRD 254
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++TA++ G+ + G +++AR + D M +N VSW M+ Y++ EA+ELF MP
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPC 314
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+NV M+TG+ + GMLE A+ +F+ + KD VS+ AM+A Y+Q G +EE L+LF
Sbjct: 315 --RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFI 372
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + + V + C+ + L G Q H +IR G+ V NA++ MY +CG
Sbjct: 373 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCG 432
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ AF ++ ++VSWNT+IA +A+HG ++AL F M PD IT + +L+
Sbjct: 433 NMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLA 492
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H+G V + + F M +G+ EHYTC++D+L RAG+L +A + + MPFE D+
Sbjct: 493 ACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDS 552
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+WG+LL A I+ N ELG AA+K+ EL+P+N+ +YV+LSN+YA++G WRD ++R++M
Sbjct: 553 TMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMM 612
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+E+GV K +SWIE+ NKVH F GD HP +KI+ L+ ++MK
Sbjct: 613 EERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 660
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LIR FV NA ++ + G + AR F++M +DV++WN +I GY ++GF +E+
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMIS 151
+F M + ++ ++A C + ++ YF +M T Y MI
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ GRL EA L + MP
Sbjct: 529 LLGRAGRLAEAHDLMKDMP 547
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/528 (38%), Positives = 329/528 (62%), Gaps = 2/528 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N IS+ + G +S AR FD KD ++WN ++ Y +NG ++E++ LF S +++
Sbjct: 135 NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI 194
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN +++G + ++ +A + F MP R+ ++N M+SG+ + G + EA RLF+ P R+
Sbjct: 195 SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRD 254
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++TA++ G+ + G +++AR + D M +N VSW M+ Y++ EA+ELF MP
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPC 314
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+NV M+TG+ + GMLE A+ +F+ + KD VS+ AM+A Y+Q G +EE L+LF
Sbjct: 315 --RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFI 372
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + + V + C+ + L G Q H +IR G+ V NA++ MY +CG
Sbjct: 373 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCG 432
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ AF ++ ++VSWNT+IA +A+HG ++AL F M PD IT + +L+
Sbjct: 433 NMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLA 492
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H+G V + + F M +G+ EHYTC++D+L RAG+L +A + + MPFE D+
Sbjct: 493 ACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDS 552
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+WG+LL A I+ N ELG AA+K+ EL+P+N+ +YV+LSN+YA++G WRD ++R++M
Sbjct: 553 TMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMM 612
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+E+GV K +SWIE+ NKVH F GD HP +KI+ L+ ++MK
Sbjct: 613 EERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 660
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LIR FV NA ++ + G + AR F++M +DV++WN +I GY ++GF +E+
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMIS 151
+F M + ++ ++A C + ++ YF +M T Y MI
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ GRL EA L + MP
Sbjct: 529 LLGRAGRLAEAHDLMKDMP 547
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/528 (38%), Positives = 329/528 (62%), Gaps = 2/528 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N IS+ + G +S AR FD KD ++WN ++ Y +NG ++E++ LF S +++
Sbjct: 10 NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI 69
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN +++G + ++ +A + F MP R+ ++N M+SG+ + G + EA RLF+ P R+
Sbjct: 70 SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRD 129
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++TA++ G+ + G +++AR + D M +N VSW M+ Y++ EA+ELF MP
Sbjct: 130 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPC 189
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+NV M+TG+ + GMLE A+ +F+ + KD VS+ AM+A Y+Q G +EE L+LF
Sbjct: 190 --RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFI 247
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + + V + C+ + L G Q H +IR G+ V NA++ MY +CG
Sbjct: 248 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCG 307
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ AF ++ ++VSWNT+IA +A+HG ++AL F M PD IT + +L+
Sbjct: 308 NMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLA 367
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H+G V + + F M +G+ EHYTC++D+L RAG+L +A + + MPFE D+
Sbjct: 368 ACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDS 427
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+WG+LL A I+ N ELG AA+K+ EL+P+N+ +YV+LSN+YA++G WRD ++R++M
Sbjct: 428 TMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMM 487
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+E+GV K +SWIE+ NKVH F GD HP +KI+ L+ ++MK
Sbjct: 488 EERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 535
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 42/228 (18%)
Query: 43 RLFST---QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
RLF + VF A +S ++ G + AR++FD M ++ ++WNA++ Y Q + E
Sbjct: 120 RLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDE 179
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+K LF MP +N+ SWN M+ G +++A F MP+++ ++ AM++ + + G
Sbjct: 180 AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCS 239
Query: 160 EEATRLFEQMPR------RNVISY---------------------------------TAM 180
EE +LF +M R R+ + A+
Sbjct: 240 EETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNAL 299
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
L + K G ++ AR + M ++VVSW MI GY ++ EA E+F
Sbjct: 300 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIF 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LIR FV NA ++ + G + AR F++M +DV++WN +I GY ++GF +E+
Sbjct: 284 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 343
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMIS 151
+F M + ++ ++A C + ++ YF +M T Y MI
Sbjct: 344 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 403
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ GRL EA L + MP
Sbjct: 404 LLGRAGRLAEAHDLMKDMP 422
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/528 (38%), Positives = 328/528 (62%), Gaps = 2/528 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N IS+ + G +S AR FD KD ++WN ++ Y +NG ++E++ LF S + +
Sbjct: 135 NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAI 194
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN +++G + ++ +A + F MP R+ ++N M+SG+ + G + EA RLF+ P R+
Sbjct: 195 SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRD 254
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++TA++ G+ + G +++AR + D M +N VSW M+ Y++ EA+ELF MP
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPC 314
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+NV M+TG+ + GMLE A+ +F+ + KD VS+ AM+A Y+Q G +EE L+LF
Sbjct: 315 --RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFI 372
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + + V + C+ + L G Q H +IR G+ V NA++ MY +CG
Sbjct: 373 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCG 432
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ AF ++ ++VSWNT+IA +A+HG ++AL F M PD IT + +L+
Sbjct: 433 NMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLA 492
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H+G V + + F M +G+ EHYTC++D+L RAG+L +A + + MPFE D+
Sbjct: 493 ACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDS 552
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+WG+LL A I+ N ELG AA+K+ EL+P+N+ +YV+LSN+YA++G WRD ++R++M
Sbjct: 553 TMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMM 612
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+E+GV K +SWIE+ NKVH F GD HP +KI+ L+ ++MK
Sbjct: 613 EERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 660
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LIR FV NA ++ + G + AR F++M +DV++WN +I GY ++GF +E+
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMIS 151
+F M + ++ ++A C + ++ YF +M T Y MI
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ GRL EA L + MP
Sbjct: 529 LLGRAGRLAEAHDLMKDMP 547
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/528 (39%), Positives = 328/528 (62%), Gaps = 2/528 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N IS+ + G +S AR FD KD ++WN ++ Y +NG +QE++ LF S + +
Sbjct: 204 NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAI 263
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN ++AG + +I++A F MP+R+ ++N M+SG+ + G + EA RLF+ P R+
Sbjct: 264 SWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRD 323
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++TA++ G+ + G +++A+ + D M KN VSW M+ YV+ EA+ELF MP
Sbjct: 324 VFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPC 383
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+NV M+TG+ + GML+ AR +F + KD VS+ AM+A Y+Q G +EE L+LF
Sbjct: 384 --RNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFK 441
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + + V + C+ + L G Q H +I+ G+ V NA++ MY +CG
Sbjct: 442 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCG 501
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ ++ AF ++ ++VSWNT+IA +A+HG ++AL F M PD IT + +L+
Sbjct: 502 SMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLA 561
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H+G V + + F M + +G+ EHYTC++D+L RAG+L++A + + MPFE D+
Sbjct: 562 ACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDS 621
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+WG+LL A I+ N ELG AA+K+ EL+P+N+ +YV+LSN+YA++G WRDV ++R +M
Sbjct: 622 TMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIM 681
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
E+GV K +SWIE+ NKVH F GD HP + I+ L+ ++MK
Sbjct: 682 HERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMK 729
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 207/439 (47%), Gaps = 53/439 (12%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
+VI N IT + + G + +++ LF +MP ++ ++N M+AG N R+ A +F+++P
Sbjct: 106 EVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP 165
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
++ +YN ++ L + LF++MP ++ +SY M+ G V AR D
Sbjct: 166 RPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDL 225
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------------------------ 235
K+ VSW M+ YV+N R EARELF ++D
Sbjct: 226 APEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMF 285
Query: 236 -----KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
++V M++G+ + G + AR LF+ +D ++ A+++GYAQNG+ EEA R
Sbjct: 286 NKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKR 345
Query: 291 LFSGMIKMDMQPDDATLV--SVFTACSALQLLNEGRQSHVLVIRNGFEA----NVSVCNA 344
+F M PD + ++ A +++ E ++ F+A NV+ N
Sbjct: 346 VFDAM------PDKNAVSWNAMMAAYVQRRMMEEAKEL--------FDAMPCRNVASWNT 391
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++T Y++ G + ++ F + + VSW ++AA++Q G E+ L F +MG G +
Sbjct: 392 MLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVN 451
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKV-YGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
F +LS C + M L ++K YG+ L+ + + G +E+A
Sbjct: 452 RSAFACVLSTCADIAALECGMQLHSRLIKAGYGV--GCFVGNALLAMYFKCGSMEEAHSA 509
Query: 464 TQGMPFEADTGVWGSLLAA 482
+ M E D W +++A
Sbjct: 510 FEEME-ERDVVSWNTMIAG 527
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 326/534 (61%), Gaps = 3/534 (0%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
N P + + S + N +S G I+ AR++FD+M ++V++W A++ GY
Sbjct: 142 NKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGY 201
Query: 92 WQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
+ G + E++ LF MP KN+VSW M+ G + RID+A F MPE++ T MI
Sbjct: 202 VKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIG 261
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
G+ + GRL EA LF++MPRRNV+S+T M+ G+++ +VD AR L + M KN VSWT M
Sbjct: 262 GYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAM 321
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ GY R EA ELF MP K+V AMI F + G + AR +F++++ KD +
Sbjct: 322 LKGYTNCGRLDEASELFNAMPI--KSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGT 379
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
++AMI Y + G+ +AL LF M + ++P+ +L+SV + C+ L L+ GR+ H ++
Sbjct: 380 WSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLV 439
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
R+ F+ +V V + +++MY +CG + ++ F + ++V WN+II +AQHG +AL
Sbjct: 440 RSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALR 499
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F M +G PD +TF+ +LSAC + G V + +++F M Y + EHY C+VD+L
Sbjct: 500 VFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLL 559
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
RAG+L +A + + MP EAD +WG+LL AC ++ ++L E+AAKK+ L+P+N+ ++
Sbjct: 560 GRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFI 619
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS-HP 564
+LSN+YA+ G W DV +R M+++ V+K SWI + KVH F GGD S HP
Sbjct: 620 LLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHP 673
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 326/534 (61%), Gaps = 3/534 (0%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
N P + + S + N +S G I+ AR++FD+M ++V++W A++ GY
Sbjct: 142 NKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGY 201
Query: 92 WQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
+ G + E++ LF MP KN+VSW M+ G + RID+A F MPE++ T MI
Sbjct: 202 VKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIG 261
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
G+ + GRL EA LF++MPRRNV+S+T M+ G+++ +VD AR L + M KN VSWT M
Sbjct: 262 GYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAM 321
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ GY R EA ELF MP K+V AMI F + G + AR +F++++ KD +
Sbjct: 322 LKGYTNCGRLDEASELFNAMPI--KSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGT 379
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
++AMI Y + G+ +AL LF M + ++P+ +L+SV + C+ L L+ GR+ H ++
Sbjct: 380 WSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLV 439
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
R+ F+ +V V + +++MY +CG + ++ F + ++V WN+II +AQHG +AL
Sbjct: 440 RSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALR 499
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F M +G PD +TF+ +LSAC + G V + +++F M Y + EHY C+VD+L
Sbjct: 500 VFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLL 559
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
RAG+L +A + + MP EAD +WG+LL AC ++ ++L E+AAKK+ L+P+N+ ++
Sbjct: 560 GRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFI 619
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS-HP 564
+LSN+YA+ G W DV +R M+++ V+K SWI + KVH F GGD S HP
Sbjct: 620 LLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHP 673
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/536 (38%), Positives = 325/536 (60%), Gaps = 4/536 (0%)
Query: 31 GNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITG 90
N P + L + + N +S + G+I AR++FD M ++V++W A++ G
Sbjct: 60 ANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKG 119
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI 150
Y NG + +++LF MP KN VSW M+ G + + RIDDA ++ +P+++ +MI
Sbjct: 120 YVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMI 179
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
G K GR++EA +F++M R+VI++T M+ G+ + VD AR + D M K VSWT
Sbjct: 180 HGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTS 239
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
M+ GYV+N R +A ELF MP K V AMI+G + G + AR +F+ ++ ++
Sbjct: 240 MLMGYVQNGRIEDAEELFEVMPV--KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+ +I + +NG EAL LF M K ++P TL+S+ + C++L L+ G+Q H +
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+R F+ +V V + ++TMY +CG ++ S+L F + S +++ WN+II+ +A HG E+AL
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 391 IFFSQMGLNG-FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
F +M L+G P+ +TF++ LSAC +AG V E + ++E M V+G+ P + HY C+VD
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVD 477
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L RAG+ +A ++ M E D VWGSLL AC + +++ E AKK+ E++P+NS
Sbjct: 478 MLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGT 537
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL-GGDMSHP 564
Y++LSN+YA+ G W DV +R LMK + V K SW E+ NKVH F GG SHP
Sbjct: 538 YILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHP 593
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 209/416 (50%), Gaps = 32/416 (7%)
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
TT T N IT + G + E++ LF S K+I SWN M+AG N DA F
Sbjct: 13 TTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFD 72
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
MP+RN ++N ++SG++K+G ++EA ++F+ MP RNV+S+TA++ G++ G+VD A +L
Sbjct: 73 EMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
M KN VSWTVM+ G++++ R +A +L+ +PD D T+MI G CK G ++
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDN--IARTSMIHGLCKEGRVDE 190
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR +F+ + + +++ M+ GY QN ++A ++F D+ P+ V
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEK---TEVSWTSML 241
Query: 317 LQLLNEGRQSHVLVIRNGFEA----NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
+ + GR + FE V CNA+I+ + G I + F + N S
Sbjct: 242 MGYVQNGRIEDAEEL---FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDAS 298
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG------HAGKVNESMD 426
W T+I ++G +AL F M G P T +S+LS C H +V+ +
Sbjct: 299 WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ V VY + L+ + + G+L K+ I P D +W S+++
Sbjct: 359 RCQFDVDVYVA-------SVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISG 406
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/588 (34%), Positives = 346/588 (58%), Gaps = 60/588 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA I+ ++ G+ A ++F++M KD++++N+++ GY QNG + + F+ M +N+V
Sbjct: 146 NAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVV 205
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN M+AG ++N + A++ F+ +P+ N ++ M+ GF +HG++ EA +LF++MP +N
Sbjct: 206 SWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKN 265
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V+S+ AM+ +++ ++D+A L +K+ VSWT MI GYV+ + EARE++ +MP
Sbjct: 266 VVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPY 325
Query: 234 YD-----------------------------KNVFVVTAMITGFCKVGMLENARLLFERI 264
D ++ +MI G+C+ G + A LF ++
Sbjct: 326 KDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQM 385
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-------------------IKMDM----- 300
K+ VS+N MI+GYAQ G + A +F M + +D
Sbjct: 386 PVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLV 445
Query: 301 -------QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
+PD +T ++C+ L L G+Q H L++++G+ ++ V NA+I MY++CG
Sbjct: 446 LMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCG 505
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
G+ +E F+ I +L+SWN++I+ +A +G+ +A F QM G PD +TF+ +LS
Sbjct: 506 GVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLS 565
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC HAG N+ +DLF+ M++ + I P +EHY+CLVD+L R G+LE+A+ I +GM +A+
Sbjct: 566 ACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANA 625
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
G+WGSLLAAC ++ N+ELG++AA ++ EL+P N++ Y+ LSN++A AG W DV R+R+LM
Sbjct: 626 GLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLM 685
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+E+ K SWIE+ N++ F+ D + I + L S M+
Sbjct: 686 RERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHMR 733
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/431 (32%), Positives = 230/431 (53%), Gaps = 13/431 (3%)
Query: 57 ISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
I+ +R G + AR+LF+ + K D WNA+I GY + G +++ +F+ MPVK++VS+
Sbjct: 117 ITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSY 176
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
N M+AG N ++ A +F+ M ERN ++N M++GF+ + L A LFE++P N +
Sbjct: 177 NSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAV 236
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
S+ ML GF + G++ +AR L D M KNVVSW MI YV++ + EA +LF P
Sbjct: 237 SWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETP--Y 294
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
K+ T MI G+ +VG L+ AR ++ ++ KD + A+++G QNG +EA ++FS +
Sbjct: 295 KDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQL 354
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
K D ++ + + + LN RQ V N N +I+ Y++ G +
Sbjct: 355 NKRDAICWNSMIAGYCQSGRMSEALNLFRQMPV--------KNAVSWNTMISGYAQAGEM 406
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F + N++SWN++I F Q+G Y AL MG G PD TF LS+C
Sbjct: 407 DRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSC 466
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ + L EL++K G I L+ + ++ G ++ A ++ + + D
Sbjct: 467 ANLAALQVGKQLHELILK-SGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIE-GVDLIS 524
Query: 476 WGSLLAACVIN 486
W SL++ +N
Sbjct: 525 WNSLISGYALN 535
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 32/386 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V A +S L + G+I A Q+F Q+ +D I WN++I GY Q+G + E+ NLF+ MPV
Sbjct: 328 VAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPV 387
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
KN VSWN MI+G +D A + F+AM RN ++N++I+GFL++G
Sbjct: 388 KNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGL----------- 436
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYM-SFKNVVSWTVMITGYVKNERFCEARELF 228
Y L + G+ K S + S + + + G + EL
Sbjct: 437 -------YLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGK-------QLHELI 482
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+ Y ++FV A+I + K G +++A +F+ I+ D +S+N++I+GYA NG A EA
Sbjct: 483 LK-SGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEA 541
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVIT 347
F M PD+ T + + +ACS L N+G +I E + ++
Sbjct: 542 FWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVD 601
Query: 348 MYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP-DG 405
+ R G + ++ R + N W +++AA H + E I + + L +P +
Sbjct: 602 LLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKI--AALRLLELEPHNA 659
Query: 406 ITFLSLLSACGHAGKVNESMDLFELM 431
+++L + AG+ + L LM
Sbjct: 660 SNYITLSNMHAEAGRWEDVERLRVLM 685
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
LN G +S + +N F N I + G I +++ F + N ++N+++
Sbjct: 3 LNIGTRSTLEQSKNVFNQNKK-----IIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTV 57
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
FA++G A F +M +++ ++++ H V E+ LF+LM +
Sbjct: 58 FAKNGRVSDARQLFDKMSQRNL----VSWNTMIAGYLHNNMVEEAHKLFDLMAE-----R 108
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + ++ +R G LEKA ++ + +P + DT W +++A
Sbjct: 109 DNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAG 151
>gi|297826975|ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327209|gb|EFH57629.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/512 (41%), Positives = 321/512 (62%), Gaps = 6/512 (1%)
Query: 57 ISALSRAGKISAARQLFDQM-TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
I+ + G + AR+LFD++ + K+V+TW A+++GY ++ L ++ LFQ MP +NIVSW
Sbjct: 84 ITGYIKLGNMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSVAETLFQEMPERNIVSW 143
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
N MI G + RID A + F MPERNT ++N MI ++ GR++EA LFE+MP ++VI
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVI 203
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
S+TAM+DG K G+VD+AR L D M +N++SW MITGY N R EA +LF MP+ D
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYTYNNRIDEADQLFQVMPERD 263
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ MITGF + + A LF+R+ K+ +S+ AMI GY +N EEAL++FS M
Sbjct: 264 FASW--NTMITGFIRNREINRACGLFDRMPQKNVISWTAMITGYVENKENEEALKVFSKM 321
Query: 296 IKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
++ ++P+ T VS+ +ACS L L EG+Q H L+ ++ + N V +A+I MYS+ G
Sbjct: 322 LRDGCVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQENEVVTSALINMYSKSGE 381
Query: 355 ILDSELAFRQ--IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
++ + F + +L+SWN++IA +A HGH ++A+ + QM +GF P +T+L+LL
Sbjct: 382 LIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYDQMRKHGFKPSEVTYLNLL 441
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC HAG V + M+ F+ +V+ + EHYTCLVD+ RAG+L+
Sbjct: 442 FACSHAGLVEKGMEFFKELVRDESLPLREEHYTCLVDLCGRAGRLKDVLNFINCDDARLS 501
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
+G++L+AC ++ V + + KK+ E ++ YVM+SN+YAA+G +R+
Sbjct: 502 RSFYGAILSACNVHSEVSIAKEVVKKVLETGSDDAGTYVMMSNIYAASGKREKAAEMRMK 561
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
MKE+G+ KQ SW++IGN+ H F+ GD SHP
Sbjct: 562 MKEKGLKKQPGCSWVKIGNQTHLFVVGDKSHP 593
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 179/320 (55%), Gaps = 40/320 (12%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N I +++G+I A +LFD+M ++ ++WN +I Q G + E+ NLF+ MP+K+++
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVI 203
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SW M+ G N ++D+A F MPERN ++NAMI+G+ + R++EA +LF+ MP R+
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYTYNNRIDEADQLFQVMPERD 263
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-- 231
S+ M+ GF++ E+++A L D M KNV+SWT MITGYV+N+ EA ++F +M
Sbjct: 264 FASWNTMITGFIRNREINRACGLFDRMPQKNVISWTAMITGYVENKENEEALKVFSKMLR 323
Query: 232 -----PD-------------------------------YDKNVFVVTAMITGFCKVGMLE 255
P+ + +N V +A+I + K G L
Sbjct: 324 DGCVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQENEVVTSALINMYSKSGELI 383
Query: 256 NARLLFER--IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
AR +F+ + +D +S+N+MIA YA +G +EA+ ++ M K +P + T +++ A
Sbjct: 384 AARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYDQMRKHGFKPSEVTYLNLLFA 443
Query: 314 CSALQLLNEGRQSHVLVIRN 333
CS L+ +G + ++R+
Sbjct: 444 CSHAGLVEKGMEFFKELVRD 463
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 185/366 (50%), Gaps = 43/366 (11%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM-SFKNVVS 207
+I K G+L EA +LF+ +P R+V+++T ++ G++K G + +AR L D + S KNVV+
Sbjct: 52 LIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVT 111
Query: 208 WTVMITGYVKNERFCEARELFYRMPDY-----------------------------DKNV 238
WT M++GY+++++ A LF MP+ ++N
Sbjct: 112 WTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNT 171
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
MI + G ++ A LFER+ KD +S+ AM+ G A+NG +EA RLF M +
Sbjct: 172 VSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFDCMPER 231
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++ +A + T + ++E Q ++ F + N +IT + R I +
Sbjct: 232 NIISWNA----MITGYTYNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNREINRA 283
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFLSLLSACGH 417
F ++ N++SW +I + ++ E+AL FS+M +G P+ T++S+LSAC
Sbjct: 284 CGLFDRMPQKNVISWTAMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSD 343
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYT-CLVDILSRAGQLEKAWQI-TQGMPFEADTGV 475
+ E + +L+ K + +E T L+++ S++G+L A ++ G+ + D
Sbjct: 344 LAGLVEGQQIHQLISK--SVHQENEVVTSALINMYSKSGELIAARKMFDNGLVCQRDLIS 401
Query: 476 WGSLLA 481
W S++A
Sbjct: 402 WNSMIA 407
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/585 (35%), Positives = 343/585 (58%), Gaps = 61/585 (10%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L R +ST N+ +IS LSR G+I+ AR+ FD + K + +WN+I++GY+ NG +E+
Sbjct: 8 LHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREA 67
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG--- 157
+ +F MP +NIVSWN +++G I N I++A + F+ MPERN ++ AM+ G+++ G
Sbjct: 68 RQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVV 127
Query: 158 ----------------------------RLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
R+++A +L++ MP ++V++ T M+ G ++G
Sbjct: 128 EAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGR 187
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD-------------- 235
VD+AR + D M +NV++WT MITGY +N+R AR+LF MP+
Sbjct: 188 VDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLS 247
Query: 236 ---------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
K V AMI +VG + AR +F++++ +D ++ MI Y
Sbjct: 248 GRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYE 307
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
+ G EAL LF+ M + ++P +L+S+ + C+ L L GRQ H ++R F+ +V
Sbjct: 308 RKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVY 367
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V + ++TMY +CG ++ ++L F + S +++ WN+II+ +A HG E+AL F +M L+G
Sbjct: 368 VASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSG 427
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
P+ +T +++L+AC + GK+ E +++FE M + + P+ EHY+C VD+L RAG+++KA
Sbjct: 428 TMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKA 487
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
++ M + D VWG+LL AC + ++L E+AAKK+ E++P+N+ Y++LS++ A+
Sbjct: 488 MELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASR 547
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL-GGDMSHP 564
W DV +R M+ + V+K SWIE+G KVH F GG +HP
Sbjct: 548 SKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHP 592
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/544 (36%), Positives = 339/544 (62%), Gaps = 5/544 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N ++ ++G +S+A QLF+++ + ++W ++ G + G + E++ LF MP KN+V
Sbjct: 208 NLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVV 267
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN MIA + + ++D+A F+ MP +++ ++ +I+G+++ G+L+EA +++ QMP ++
Sbjct: 268 SWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKD 327
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
+ + TA++ G ++ G +D+A + + +VV W MI GY ++ R EA LF +MP
Sbjct: 328 ITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPI 387
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
KN MI+G+ + G ++ A +F+ ++ K+ VS+N++IAG+ QN + +AL+
Sbjct: 388 --KNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLV 445
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M K +PD +T +AC+ L L G Q H ++++G+ ++ V NA+I MY++CG
Sbjct: 446 MMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCG 505
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ +E FR I +L+SWN++I+ +A +G+ KA F QM PD +TF+ +LS
Sbjct: 506 RVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLS 565
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC HAG N+ +D+F+ M++ + I P +EHY+CLVD+L R G+LE+A+ +GM +A+
Sbjct: 566 ACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANA 625
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
G+WGSLL AC ++ N+ELG AA+++ EL+P N++ Y+ LSN++A AG W +V RVR+LM
Sbjct: 626 GLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLM 685
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSW 593
+ + KQ SWIE+ N++ +FL D + I + L + M+ D +
Sbjct: 686 RGKRAGKQPGCSWIEVQNQIQHFLSHDPAKLRPKNIQIILNTLAAHMR---DKCNTSDMK 742
Query: 594 SSFD 597
S+FD
Sbjct: 743 SAFD 746
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 236/431 (54%), Gaps = 13/431 (3%)
Query: 57 ISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
I+ +R GK+ AR+L + + K D WNA+I GY + G ++K +F+ MP K++VS+
Sbjct: 117 ITCYTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSY 176
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
N M+AG N ++ A +F++M ERN ++N M++G++K G L A +LFE++P N +
Sbjct: 177 NSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAV 236
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
S+ ML G K G++ +AR L D M KNVVSW MI YV++ + EA +LF +MP D
Sbjct: 237 SWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKD 296
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ T +I G+ +VG L+ AR ++ ++ KD + A+++G QNG +EA ++FS +
Sbjct: 297 SVSW--TTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRI 354
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
D+ ++ + + + LN RQ + I+N N +I+ Y++ G +
Sbjct: 355 GAHDVVCWNSMIAGYSRSGRMDEALNLFRQ---MPIKNSVS-----WNTMISGYAQAGQM 406
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F+ + N+VSWN++IA F Q+ Y AL MG G PD TF LSAC
Sbjct: 407 DRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSAC 466
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ + L E ++K G + L+ + ++ G+++ A Q+ + + D
Sbjct: 467 ANLAALQVGNQLHEYILKS-GYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIEC-VDLIS 524
Query: 476 WGSLLAACVIN 486
W SL++ +N
Sbjct: 525 WNSLISGYALN 535
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 184/384 (47%), Gaps = 44/384 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ A +S L + G+I A Q+F ++ DV+ WN++I GY ++G + E+ NLF+ MP+
Sbjct: 328 ITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPI 387
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
KN VSWN MI+G ++D A + FQAM E+N ++N++I+GFL++ +A + M
Sbjct: 388 KNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMM 447
Query: 170 PRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
+ + ++ L + L +Y ++ +GY+
Sbjct: 448 GKEGKKPDQSTFACTLSACANLAALQVGNQLHEY----------ILKSGYM--------- 488
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
++FV A+I + K G +++A +F I+ D +S+N++I+GYA NG A
Sbjct: 489 ----------NDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYA 538
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNA 344
+A + F M + PD+ T + + +ACS L N+G +I + E +
Sbjct: 539 NKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSC 598
Query: 345 VITMYSRCGGILDSELAFRQIH----SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
++ + R G + E AF + N W +++ A H + E L F+ L
Sbjct: 599 LVDLLGRVGRL---EEAFNTVRGMKVKANAGLWGSLLGACRVHKNLE--LGRFAAERLFE 653
Query: 401 FDP-DGITFLSLLSACGHAGKVNE 423
+P + +++L + AG+ E
Sbjct: 654 LEPHNASNYITLSNMHAEAGRWEE 677
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/512 (39%), Positives = 320/512 (62%), Gaps = 4/512 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N IS + G ++ AR++FD M ++V++W +++ GY Q G ++E++ LF MP +N+V
Sbjct: 87 NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVV 146
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SW MI G + RIDDA F +PE++ MI G+ + GRL+EA LF++M RN
Sbjct: 147 SWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRN 206
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++T M+ G+ K G VD AR L + M +N VSWT M+ GY ++ R EA ELF MP
Sbjct: 207 VFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPV 266
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
K + MI F G + AR++FE ++ +D ++NAMI + + G+ EAL LF+
Sbjct: 267 --KWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFA 324
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + + +++SV + C++L L+ GRQ H ++R+ F+ ++ V + +ITMY +CG
Sbjct: 325 RMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCG 384
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
++ ++ F + ++V WN++I ++QHG E+AL F M +G PD +TF+ +LS
Sbjct: 385 DLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLS 444
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC ++GKV E ++FE M Y + P EHY C+VD+L RAG++++A ++ + MP E D
Sbjct: 445 ACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDA 504
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
VWG+LL AC ++ ++L E+A +K+ +L+P+N+ YV+LS++YA G WRDV +R +
Sbjct: 505 IVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKI 564
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGD-MSHP 564
+ V K SWIE+ KVH F GGD SHP
Sbjct: 565 NRR-VIKFPGCSWIEVEKKVHMFTGGDSKSHP 595
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY---VFVNNAKISALSRAGKISAARQLF 73
FP ++ +LS S + H RL +++ ++V + I+ + G + A+ +F
Sbjct: 335 FPSMISVLSVCASLASLD-HGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIF 393
Query: 74 DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRID 129
++ KDV+ WN++ITGY Q+G +E+ N+F M + V++ +++ C + ++
Sbjct: 394 NRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVK 453
Query: 130 DAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRR-NVISYTAML 181
+ F+ F+AM E Y M+ + GR++EA L E+MP + I + A+L
Sbjct: 454 EGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALL 511
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 37/283 (13%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L +++ N I AG++ AR +F+ M +D TWNA+I + + G E+
Sbjct: 260 LFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEA 319
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
LF M + + A ++ P + L HGR
Sbjct: 320 LGLFARMQREGV------------------ALNF----PSMISVLSVCASLASLDHGRQV 357
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
A RL +++ + ++ ++K G++ +A+ + + FK+VV W MITGY ++
Sbjct: 358 HA-RLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGL 416
Query: 221 FCEARELFYRM------PDYDKNVFVVTAM-ITGFCKVG--MLENARLLFERIQPKDCVS 271
EA +F+ M PD + V++A +G K G + E + ++ ++P
Sbjct: 417 GEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQ-VEP-GIEH 474
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ M+ + G +EA+ L KM M+PD ++ AC
Sbjct: 475 YACMVDLLGRAGRVDEAMELVE---KMPMEPDAIVWGALLGAC 514
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 340 SVCN--AVITMYSRCGGILDSELAFRQIHSPN--LVSWNTIIAAFAQHGHYEKALIFFSQ 395
S+C+ + I+ Y R G I ++ F P + SWN +++A+ + AL+ F Q
Sbjct: 18 SLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQ 77
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M + ++F ++S G V ++ +F++M + + +T +V + G
Sbjct: 78 MPQR----NTVSFNGMISGYVKNGMVADARKVFDVMPERNVV-----SWTSMVRGYVQEG 128
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
+E+A ++ MP + W ++ + ++ AKK+ ++ P+ V V
Sbjct: 129 MVEEAEKLFWEMP-RRNVVSWTVMIGGLLKESRID----DAKKLFDMIPEKDVVVV 179
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/538 (39%), Positives = 323/538 (60%), Gaps = 8/538 (1%)
Query: 38 SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+ L R + V ++A IS RAG++ ARQ+FDQM ++V +W ++++GY++ G +
Sbjct: 101 AEILFREIPERNVVADSAMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNV 160
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
E+ LF MP KN+VSW + G N ID+A D F MPE+N + AM+ ++++
Sbjct: 161 DEAMRLFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVEND 220
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
++EA LF QMP+RN+ S+ M+ G + +++A L + M +N VSWT ++TG +
Sbjct: 221 EIDEAFELFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLAR 280
Query: 218 NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
N AR+ F MP K++ AMIT + G + A LF + K+ VS+NA+I
Sbjct: 281 NGMMELARKYFDHMPT--KDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALID 338
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC-SALQLLNEGRQSHVLVIRNGFE 336
GYA+NG +LR M++ + +P++ T+ SV TAC S L+L+ Q+H LVI GFE
Sbjct: 339 GYARNGPESNSLRYLILMLRSNFKPNETTITSVLTACDSILELM----QAHGLVIHLGFE 394
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ + N ++T YSRCG +L + F Q+ ++VSW +I A++ HG AL F++M
Sbjct: 395 QDKVLANGLVTTYSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARM 454
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
+G PDGITF+ LLSAC HAG V + LF+ M YG+ P +EHY+CLVDIL RAG+
Sbjct: 455 LRSGAKPDGITFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGE 514
Query: 457 LEKAWQITQGMP-FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+ KA ++ MP E D V G+LL AC ++ +V L +K+ E +P +S YV+L+N
Sbjct: 515 MNKAMKVVSEMPPHECDGAVLGALLGACRLHKDVGLANHIGEKLIEKEPTSSGSYVLLAN 574
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
YAA G W + VR MKE+ V K+ +S IE+ K H F D SHP +++I+L L
Sbjct: 575 AYAACGKWNEFAEVRKEMKERNVKKEPGFSQIEVKGKSHVFFVRDRSHPQLEEIYLFL 632
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 185/338 (54%), Gaps = 14/338 (4%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D N I+ G ++E++ +F MP ++ VS+ MI + N + A F+ +P
Sbjct: 50 DTYESNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIP 109
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
ERN +AMISG+++ GRL++A ++F+QM RNV S+T+++ G+ K G VD+A L +
Sbjct: 110 ERNVVADSAMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQ 169
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M KNVVSWT + GY +N EAR++F +MP +KN+ TAM+ + + ++ A
Sbjct: 170 MPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMP--EKNIIAWTAMVKSYVENDEIDEAFE 227
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LF ++ ++ S+N MI+G EA++LF+ M Q ++ + ++ T + +
Sbjct: 228 LFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMP----QRNEVSWTTLVTGLARNGM 283
Query: 320 LNEGRQ--SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
+ R+ H+ +++ NA+IT Y G + ++ F + N+VSWN +I
Sbjct: 284 MELARKYFDHMPT------KDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALI 337
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+A++G +L + M + F P+ T S+L+AC
Sbjct: 338 DGYARNGPESNSLRYLILMLRSNFKPNETTITSVLTAC 375
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/570 (37%), Positives = 327/570 (57%), Gaps = 61/570 (10%)
Query: 56 KISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
+IS LSR GKI+ AR+ FD + K + +WN+I++GY+ NG +E++ LF M +N+VSW
Sbjct: 23 EISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSW 82
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
N +++G I N I +A + F+ MPERN ++ AM+ G+++ G + EA LF +MP RN +
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFK-------------------------------N 204
S+T M G + G +DKAR L D M K N
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPDYD----------------------------- 235
VV+WT MITGY +N R AR+LF MP+
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
K V AMI GF +VG + AR +F+ ++ +D ++ MI Y + G EAL LF+ M
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
K ++P +L+S+ + C+ L L GRQ H ++R F+ +V V + ++TMY +CG +
Sbjct: 323 QKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ ++L F + S +++ WN+II+ +A HG E+AL F +M +G P+ +T +++L+AC
Sbjct: 383 VKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTAC 442
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+AGK+ E +++FE M + + P+ EHY+C VD+L RAGQ++KA ++ + M + D V
Sbjct: 443 SYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV 502
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WG+LL AC + ++L E+AAKK+ E +P N+ YV+LS++ A+ W DV VR M+
Sbjct: 503 WGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRT 562
Query: 536 QGVTKQCAYSWIEIGNKVHYFL-GGDMSHP 564
V+K SWIE+G KVH F GG +HP
Sbjct: 563 NNVSKFPGCSWIEVGKKVHMFTRGGIKNHP 592
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 329/536 (61%), Gaps = 5/536 (0%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALS--RAGKISAARQLFDQMTTKDVITWNAIIT 89
N P ++ L R ++ + NA IS LS R AA L V+++ +++
Sbjct: 61 NRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLR 120
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
GY ++G L ++ LFQ MP +N VS+ ++ G +D R+++A F MP+R+ + AM
Sbjct: 121 GYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAM 180
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+SG+ + GR+ EA LF++MP+RNV+S+TAM+ G+ + GEV+ AR L + M +N VSWT
Sbjct: 181 LSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWT 240
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
M+ GY++ +A ELF MP++ V AM+ GF + GM++ A+ +FE+++ +D
Sbjct: 241 AMLVGYIQAGHVEDAAELFNAMPEHP--VAACNAMMVGFGQRGMVDAAKTVFEKMRERDD 298
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+++AMI Y QN EAL F M+ ++P+ +++S+ T C+AL +L+ GR+ H
Sbjct: 299 GTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAA 358
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
++R F+ +V +A+ITMY +CG + ++ F ++V WN++I +AQHG E+A
Sbjct: 359 MLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQA 418
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F M L G PDGIT++ L+AC + GKV E ++F M I P +EHY+C+VD
Sbjct: 419 LGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVD 478
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L R+G +E+A+ + + MP E D +WG+L+ AC ++ N E+ E+AAKK+ EL+P N+
Sbjct: 479 LLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGP 538
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD-MSHP 564
YV+LS++Y + G W D +++R + + + K SWIE +VH F GD ++HP
Sbjct: 539 YVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHP 594
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 327/536 (61%), Gaps = 5/536 (0%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALS--RAGKISAARQLFDQMTTKDVITWNAIIT 89
N P ++ L R ++ + NA IS LS R AA L V+++ +++
Sbjct: 61 NRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLR 120
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
GY ++G L ++ LFQ MP +N VS+ ++ G +D R+++A F MP+R+ + AM
Sbjct: 121 GYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAM 180
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+SG+ + GR+ EA LF++MP+RNV+S+TAM+ G+ + GEV+ AR L + M +N VSWT
Sbjct: 181 LSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWT 240
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
M+ GY++ +A ELF MP++ V AM+ GF + GM++ A+ +FE++ +D
Sbjct: 241 AMLVGYIQAGHVEDAAELFNAMPEHP--VAACNAMMVGFGQRGMVDAAKTVFEKMCERDD 298
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+++AMI Y QN EAL F M+ ++P+ +++S+ T C+AL +L+ GR+ H
Sbjct: 299 GTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAA 358
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
++R F+ +V +A+ITMY +CG + ++ F ++V WN++I +AQHG E+A
Sbjct: 359 MLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQA 418
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F M L G PDGIT++ L+AC + GKV E ++F M I P +EHY+C+VD
Sbjct: 419 LGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVD 478
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L R+G +E+A+ + + MP E D +WG+L+ AC ++ N E+ E AAKK+ EL+P N+
Sbjct: 479 LLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGP 538
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD-MSHP 564
YV+LS++Y + G W D +++R + + + K SWIE +VH F GD ++HP
Sbjct: 539 YVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHP 594
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/517 (37%), Positives = 324/517 (62%), Gaps = 3/517 (0%)
Query: 55 AKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
A ++A +R G + AR LFD+ + +V+TW A+++GY + G + E++ LFQ MP +N+V
Sbjct: 71 ALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRMPERNVV 130
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN M+ R+ DA+ F MP R+ ++N +++ ++ G +++A +LF++MP RN
Sbjct: 131 SWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERN 190
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V+++T M+ G + G VD+ARAL D M +NVVSW MI+GY +N R EA +LF +MP
Sbjct: 191 VMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPT 250
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D + + MITGF + LE A+ LF+++ ++ +++ M+ GY Q+ +E AL++F+
Sbjct: 251 RDIASWNI--MITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFN 308
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
GM+ ++P+ T + ACS L L+EG+Q H ++ + F+ + + + ++ +Y++CG
Sbjct: 309 GMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCG 368
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I + F +++SWN +IAA+A HG +A+ + +M G+ P+ +T++ LLS
Sbjct: 369 EIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLS 428
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H+G V+E + +FE MVK I EHYTCL+D+ SRAG+L A ++ + E +
Sbjct: 429 ACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSS 488
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
VW +LL C + N +G+LAA+ + E +P N+ Y +L N+YA+AG W++ ++R M
Sbjct: 489 TVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEM 548
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
++G+ KQ SWIE+ NKVH F+ D SH D I+
Sbjct: 549 NDRGLKKQPGCSWIEVENKVHVFVSRDKSHSESDLIN 585
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 189/343 (55%), Gaps = 14/343 (4%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N ++AL R+G + AR+LFD+M ++V+ W ++ G ++G + E++ LF MP +N+V
Sbjct: 164 NILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNVV 223
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN MI+G N RID+A D F MP R+ A++N MI+GF++ LE A LF++MPRRN
Sbjct: 224 SWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRN 283
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV---KNERFCEARELFYR 230
VI++T M++G+++ + + A + + M + + V G V N + ++
Sbjct: 284 VITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQ 343
Query: 231 M---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
M + + F+ + ++ + K G + AR +F+ + KD +S+N MIA YA +GV E
Sbjct: 344 MICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVE 403
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVI 346
A+ L+ M + +P+D T V + +ACS L++EG R +V +I
Sbjct: 404 AIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLI 463
Query: 347 TMYSRCGGILDSELAFRQIH----SPNLVSWNTIIAAFAQHGH 385
+ SR G + D++ R IH P+ WN ++ HG+
Sbjct: 464 DLCSRAGRLGDAK---RLIHFLKVEPSSTVWNALLGGCNSHGN 503
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 24/237 (10%)
Query: 18 PPILRILSTPDSCGNFTPHSS----NCLIRLFSTQY-VFVNNAKISALSRAGKISAARQL 72
P + L D+C N S + +I S Q+ F+ + ++ ++ G+I AR++
Sbjct: 317 PNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKV 376
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRI 128
FD KDVI+WN +I Y +G E+ +L++ M K N V++ +++ C + +
Sbjct: 377 FDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLV 436
Query: 129 DDAFDYFQAM-PERNTAT----YNAMISGFLKHGRLEEATRLFEQM---PRRNVISYTAM 180
D+ F+ M +R+ A Y +I + GRL +A RL + P V + A+
Sbjct: 437 DEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTV--WNAL 494
Query: 181 LDGFMKKGEVD----KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
L G G AR L + N ++T++ Y ++ EA ++ M D
Sbjct: 495 LGGCNSHGNESIGDLAARNLLE-AEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMND 550
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 327/536 (61%), Gaps = 5/536 (0%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALS--RAGKISAARQLFDQMTTKDVITWNAIIT 89
N P ++ L R ++ + NA IS LS R AA L V+++ +++
Sbjct: 61 NRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLR 120
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
GY ++G L ++ LFQ MP +N VS+ ++ G +D R+++A F MP+R+ + AM
Sbjct: 121 GYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAM 180
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+SG+ + GR+ EA LF++MP+RNV+S+TAM+ G+ + GEV+ AR L + M +N VSWT
Sbjct: 181 LSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWT 240
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
M+ GY++ +A ELF MP++ V AM+ GF + GM++ A+ +FE++ +D
Sbjct: 241 AMLVGYIQAGHVEDAAELFNAMPEHP--VAACNAMMVGFGQRGMVDAAKTVFEKMCERDD 298
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+++AMI Y QN EAL F M+ ++P+ +++S+ T C+AL +L+ GR+ H
Sbjct: 299 GTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAA 358
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
++R F+ +V +A+ITMY +CG + ++ F ++V WN++I +AQHG E+A
Sbjct: 359 MLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQA 418
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F M L G PDGIT++ L+AC + GKV E ++F M I P +EHY+C+VD
Sbjct: 419 LGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVD 478
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L R+G +E+A+ + + MP E D +WG+L+ AC ++ N E+ E AAKK+ EL+P N+
Sbjct: 479 LLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGP 538
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD-MSHP 564
YV+LS++Y + G W D +++R + + + K SWIE +VH F GD ++HP
Sbjct: 539 YVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHP 594
>gi|15226879|ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana]
gi|209414526|gb|ACI46503.1| At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/541 (38%), Positives = 333/541 (61%), Gaps = 9/541 (1%)
Query: 57 ISALSRAGKISAARQLFDQMTT-KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
I+ + G + AR+LFD++ + K+V+TW A+++GY ++ L ++ LFQ MP +N+VSW
Sbjct: 84 ITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSW 143
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
N MI G + RID A + F MPERN ++N+M+ ++ GR++EA LFE+MPRR+V+
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
S+TAM+DG K G+VD+AR L D M +N++SW MITGY +N R EA +LF MP+ D
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ MITGF + + A LF+R+ K+ +S+ MI GY +N EEAL +FS M
Sbjct: 264 FASW--NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM 321
Query: 296 IK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
++ ++P+ T VS+ +ACS L L EG+Q H L+ ++ + N V +A++ MYS+ G
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 355 ILDSELAFRQ--IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
++ + F + +L+SWN++IA +A HGH ++A+ ++QM +GF P +T+L+LL
Sbjct: 382 LIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLL 441
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC HAG V + M+ F+ +V+ + EHYTCLVD+ RAG+L+
Sbjct: 442 FACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLS 501
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
+G++L+AC ++ V + + KK+ E ++ YV++SN+YAA G + +R+
Sbjct: 502 RSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMK 561
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP---CIDKIHLELKRASVQMKSVDDFVEI 589
MKE+G+ KQ SW+++G + H F+ GD SHP +D I +L+ + K+V E
Sbjct: 562 MKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNVTSDAEE 621
Query: 590 A 590
A
Sbjct: 622 A 622
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 175/310 (56%), Gaps = 40/310 (12%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N I +++G+I A +LFD+M +++++WN+++ Q G + E+ NLF+ MP +++V
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SW M+ G N ++D+A F MPERN ++NAMI+G+ ++ R++EA +LF+ MP R+
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-- 231
S+ M+ GF++ E++KA L D M KNV+SWT MITGYV+N+ EA +F +M
Sbjct: 264 FASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLR 323
Query: 232 -----PD-------------------------------YDKNVFVVTAMITGFCKVGMLE 255
P+ + KN V +A++ + K G L
Sbjct: 324 DGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELI 383
Query: 256 NARLLFER--IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
AR +F+ + +D +S+N+MIA YA +G +EA+ +++ M K +P T +++ A
Sbjct: 384 AARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFA 443
Query: 314 CSALQLLNEG 323
CS L+ +G
Sbjct: 444 CSHAGLVEKG 453
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 216/428 (50%), Gaps = 35/428 (8%)
Query: 124 DNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
DNDR F+ +++ ++ +I K G++ EA +LF+ +P R+V+++T
Sbjct: 23 DNDRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTH 82
Query: 180 MLDGFMKKGEVDKARALSDYM-SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV 238
++ G++K G++ +AR L D + S KNVV+WT M++GY+++++ A LF MP ++NV
Sbjct: 83 VITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP--ERNV 140
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
MI G+ + G ++ A LF+ + ++ VS+N+M+ Q G +EA+ LF M +
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR 200
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
D+ + ++ + ++E R+ + E N+ NA+IT Y++ I ++
Sbjct: 201 DV----VSWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEA 252
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+ F+ + + SWNT+I F ++ KA F +M + + I++ ++++
Sbjct: 253 DQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP----EKNVISWTTMITGYVEN 308
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ E++++F M++ + P+ Y ++ S L + QI Q +
Sbjct: 309 KENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQK--NE 366
Query: 479 LLAACVINLNVELGEL-AAKKM--------RELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
++ + ++N+ + GEL AA+KM R+L NS + V YA G ++ +
Sbjct: 367 IVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAV-----YAHHGHGKEAIEM 421
Query: 530 RLLMKEQG 537
M++ G
Sbjct: 422 YNQMRKHG 429
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/507 (38%), Positives = 316/507 (62%), Gaps = 2/507 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + + G + +A + F + +V++W +++G+ +NG + ES+ LF MP +NIV
Sbjct: 168 NLMVDGFIQVGDLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIV 227
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN MI+ + ID+A F+ MPER++ ++ MI+G+++ G+L+EA L +MP RN
Sbjct: 228 SWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRN 287
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
+ + TAM+ G+++ +VD+AR D + +VV W MI GY + R EA L RM
Sbjct: 288 IGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRM-- 345
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+K++ MI+ + +VG ++ A +FE + +D VS+N++IAG+ NG +AL+ F+
Sbjct: 346 VNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFA 405
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M +PD + ++C+ + L G Q H +V++ G+ + V NA+ITMY++CG
Sbjct: 406 LMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCG 465
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
IL++ L F I +++SWN++I +A +G+ ++AL F +M G PD +TF+ +LS
Sbjct: 466 RILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILS 525
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC HAG V+ + LF+ M KVY I P +EHY C+VD+L R G+L++A++I +GM +A
Sbjct: 526 ACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATA 585
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
GVWG+LL AC + N+ELG LAA K+ E +P ++ YV+LSN++A A W +V VR+LM
Sbjct: 586 GVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLM 645
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGD 560
K+ SW+E+ N+VH FL D
Sbjct: 646 NASSTVKEPGCSWVEVRNQVHGFLSDD 672
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 229/464 (49%), Gaps = 77/464 (16%)
Query: 57 ISALSRAGKISAARQLFDQMT---TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
I+ +R G++ AR+LFD + K V WNA+I+GY + G + E+K LF MPVKN++
Sbjct: 75 ITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNLI 134
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN-------------------------- 147
SWN M+AG N ++ ++F M ER+ ++N
Sbjct: 135 SWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAWKFFQETQKPN 194
Query: 148 -----AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
M+SGF ++G + E+ RLF+QMP RN++S+ AM+ ++++ E+D+A L + M
Sbjct: 195 VVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPE 254
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
++ VSWT MI GYV+ + EAREL MP +N+ TAMI+G+ + ++ AR F+
Sbjct: 255 RDSVSWTTMINGYVRIGKLDEARELLNEMP--YRNIGAQTAMISGYIQCNKVDEARRFFD 312
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
I D V +NAMIAGYA +G EAL L M+ DM
Sbjct: 313 EIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDM---------------------- 350
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
N +I+ Y++ G + + F ++ +LVSWN++IA F
Sbjct: 351 -----------------VTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFML 393
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+G AL F+ MG G PD ++F LS+C + L +++VK G +
Sbjct: 394 NGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVK-GGYLNYLV 452
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
L+ + ++ G++ +A + G+ AD W SL+ IN
Sbjct: 453 VNNALITMYAKCGRILEAGLVFNGI-CHADVISWNSLIGGYAIN 495
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 208/382 (54%), Gaps = 32/382 (8%)
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF 135
M K+ +T+N++I+ Y +NG + ++NLF MP +N+VSWN M++G + N + D+A+ F
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLF 60
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP---RRNVISYTAMLDGFMKKGEVDK 192
MP R+ ++ MI+ + ++G +E+A LF+ +P R+ V + AM+ G++KKG V++
Sbjct: 61 VIMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNE 120
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
A+ L D M KN++SW M+ GY +N + E F M + D V M+ GF +VG
Sbjct: 121 AKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERD--VVSWNLMVDGFIQVG 178
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
L++A F+ Q + VS+ M++G+A+NG E+ RLF M ++ +A + +
Sbjct: 179 DLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQ 238
Query: 313 AC---SALQLLNEGRQSHVL---VIRNGF-------EA----------NVSVCNAVITMY 349
C A +L E + + + NG+ EA N+ A+I+ Y
Sbjct: 239 RCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGY 298
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
+C + ++ F +I + ++V WN +IA +A HG +AL +M + D +T+
Sbjct: 299 IQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRM----VNKDMVTWN 354
Query: 410 SLLSACGHAGKVNESMDLFELM 431
+++S G+++ ++ +FE M
Sbjct: 355 TMISCYAQVGQMDRAVKIFEEM 376
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Y+ VNNA I+ ++ G+I A +F+ + DVI+WN++I GY NG+ +E+ LF+ M
Sbjct: 449 NYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEM 508
Query: 108 PVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGR 158
+ + V++ +++ C +D F+ M E Y M+ + GR
Sbjct: 509 ASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGR 568
Query: 159 LEEATRLFEQMPRRNVIS-YTAMLDGFMKKGEVDKARALSDYMS 201
L+EA + M + + A+L G ++ R + +S
Sbjct: 569 LDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLS 612
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/574 (37%), Positives = 320/574 (55%), Gaps = 56/574 (9%)
Query: 54 NAKISALSRA---GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
N ++A SR+ ++AAR+LFD+M +D +TWN ++ Y + G + E++ LF MP +
Sbjct: 96 NTLLAAYSRSLNSEHLAAARRLFDEMPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQR 155
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEAT------- 163
N+ SWN M+ G +++ A D F AMP +++A+ ++SGF+K+GRL EA
Sbjct: 156 NVASWNTMVTGFFSAGQVNKALDMFDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRL 215
Query: 164 -----------------------------RLFEQMPR--------------RNVISYTAM 180
RLF+ +PR RNV+S+ +M
Sbjct: 216 RVTDMDEAVDAYNTLIAAYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSM 275
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
+ +++ G+V AR + + M K++VSW MI GY K EA +LF+ MPD D +
Sbjct: 276 MTCYIRTGDVCSAREIFNEMPDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPD--IVS 333
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
+I GF + G +E+AR F+R+ + +S+N MI+GY QNG + A+ LF+ M++
Sbjct: 334 WNLIIRGFTQKGDVEHARGFFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGG 393
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
PD T SV AC++L +L G Q H L I F + + NA++TMYSR G + D+E
Sbjct: 394 TPDRHTFSSVLAACASLPMLRLGAQLHQL-IEKSFLPDTATSNALMTMYSRGGALTDAEA 452
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F+Q+ +LVSWN +I + HG +AL F M P ITF+SLLSACG+AG
Sbjct: 453 IFKQMPQKDLVSWNALIGGYEHHGCATEALQLFEDMRSARVMPTHITFISLLSACGNAGL 512
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
V+E +F+ M+ Y I EHY LV+++ R GQL+ A ++ MP D VWG+ L
Sbjct: 513 VSEGWMVFDTMIHEYSIAARIEHYAALVNLIGRHGQLDDALEVINSMPIAPDRSVWGAFL 572
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
AC N L +AAK + ++DP++SA YV++ NL+A G W + VR M++QG+ K
Sbjct: 573 GACTAKKNELLAHMAAKALSKIDPESSAPYVLIHNLHAHEGRWGSASVVREEMEQQGIHK 632
Query: 541 QCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
YSWI++ +KVH F+ GD SHP +I LK
Sbjct: 633 HPGYSWIDLHDKVHVFISGDTSHPLTQEIFSVLK 666
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 222/430 (51%), Gaps = 31/430 (7%)
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG---CIDNDRID 129
FD + + V+TWN+ + + + ++ F SMPV++ VSWN ++A ++++ +
Sbjct: 53 FDALPARSVVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSRSLNSEHLA 112
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
A F MP+R+ T+N ++ +++ G + EA +LF++MP+RNV S+ M+ GF G+
Sbjct: 113 AARRLFDEMPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVTGFFSAGQ 172
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF---YRMPDYDKNVFVVTAMIT 246
V+KA + D M K+ S +++G++KN R EA EL R+ D D+ V +I
Sbjct: 173 VNKALDMFDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAVDAYNTLIA 232
Query: 247 GFCKVGMLENARLLFE--------------RIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+ +VG + +AR LF+ R+ ++ VS+N+M+ Y + G A +F
Sbjct: 233 AYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVCSAREIF 292
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ M D+ + T+++ +T S ++ + + + ++ N +I +++
Sbjct: 293 NEMPDKDLVSWN-TMIAGYTKVSDMEEAEK-------LFWEMPDPDIVSWNLIIRGFTQK 344
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + + F ++ +SWNT+I+ + Q+GHY+ A+ F++M G PD TF S+L
Sbjct: 345 GDVEHARGFFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVL 404
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
+AC + L +L+ K + +P + L+ + SR G L A I + MP + D
Sbjct: 405 AACASLPMLRLGAQLHQLIEKSF--LPDTATSNALMTMYSRGGALTDAEAIFKQMP-QKD 461
Query: 473 TGVWGSLLAA 482
W +L+
Sbjct: 462 LVSWNALIGG 471
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
+NA ++ SR G ++ A +F QM KD+++WNA+I GY +G E+ LF+ M
Sbjct: 433 TSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALIGGYEHHGCATEALQLFEDMRSAR 492
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
+ +++ +++ C + + + + F M + Y A+++ +HG+L++A
Sbjct: 493 VMPTHITFISLLSACGNAGLVSEGWMVFDTMIHEYSIAARIEHYAALVNLIGRHGQLDDA 552
Query: 163 TRLFEQMP 170
+ MP
Sbjct: 553 LEVINSMP 560
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/531 (38%), Positives = 324/531 (61%), Gaps = 4/531 (0%)
Query: 55 AKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
A +SA +R G + AR+LFD+ + +V+TW A+++GY + + E++ LFQ MP +N+V
Sbjct: 78 ALVSAYARRGMLRDARELFDRPDARRNVVTWTALLSGYARARLVDEAEALFQRMPQRNVV 137
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN M+ R+ DA F MP R+ ++N +++ ++ G +++A LF +MP R+
Sbjct: 138 SWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKARELFGRMPERD 197
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V+++T M+DG + G+VD+AR L D M +NVVSW MI+GY +N R EA +LF +MP+
Sbjct: 198 VMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPE 257
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D + M+TGF + L+ AR LF+ + ++ V++ M+ GY + +E AL LFS
Sbjct: 258 RD--IASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFS 315
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
GM+ +P+ T + ACS L L EG+Q H ++ + F+ + V +A++ +Y++CG
Sbjct: 316 GMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCG 375
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I + F +L+SWN IIAA+A HG +A++ + +M NG+ P+ +T++ LLS
Sbjct: 376 EIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLS 435
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H+G V+E + +FE MV I EHYTCL+D+ SRAG+L+ A ++ + + +
Sbjct: 436 ACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPAS 495
Query: 474 G-VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
G VW +LL C + N +G LAA+ + + +P N+ Y +LSN+YA+AG W++ +R
Sbjct: 496 GSVWSALLGGCNAHGNESIGNLAARNLLQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSE 555
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
M +G+ KQ SWIE+ NKVH F+ D SH D I+ L+ M+ V
Sbjct: 556 MNNRGLKKQPGCSWIEVANKVHVFVARDKSHSESDLIYGLLQNIHHMMRIV 606
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 214/419 (51%), Gaps = 43/419 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + A + AG++ A LFD+M +D +WN ++ ++G + +++ LF MP ++++
Sbjct: 140 NTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKARELFGRMPERDVM 199
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+W M+ G + ++D+A F +MPERN ++NAMISG+ ++ R++EA LF +MP R+
Sbjct: 200 AWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPERD 259
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER------------- 220
+ S M+ GF++ ++ +AR L D M +NVV+WT M+ GY+K ++
Sbjct: 260 IASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLM 319
Query: 221 ----------------------FCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLEN 256
CE +++ + + + FV +A++ + K G +
Sbjct: 320 AGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGL 379
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR LF+ + KD +S+N +IA YA +GV EA+ L+ M + +P+D T V + +ACS
Sbjct: 380 ARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSH 439
Query: 317 LQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSE--LAFRQIHSPNLVSW 373
L++EG + +V +I + SR G + D++ + + +I + W
Sbjct: 440 SGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVW 499
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC-GHAGKVNESMDLFELM 431
+ ++ HG+ +++ + L +PD +LLS AGK E+ ++ M
Sbjct: 500 SALLGGCNAHGN--ESIGNLAARNLLQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEM 556
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV +A ++ ++ G+I AR+LFD KD+I+WN II Y +G E+ L++ M
Sbjct: 362 FVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQEN 421
Query: 111 ----NIVSWNCMIAGCIDNDRIDDAFDYFQAM-PERNTAT----YNAMISGFLKHGRLEE 161
N V++ +++ C + +D+ F++M +R+ A Y +I + GRL++
Sbjct: 422 GYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDD 481
Query: 162 ATRLFEQM 169
A RL +
Sbjct: 482 AKRLIHYL 489
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
N +I + G + D+ F ++VSW +++A+A+ G A F +
Sbjct: 46 NRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDR------- 98
Query: 403 PDG----ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
PD +T+ +LLS A V+E+ LF+ M + + + +++ + AG++
Sbjct: 99 PDARRNVVTWTALLSGYARARLVDEAEALFQRMPQRNVV-----SWNTMLEAYAAAGRVG 153
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
A + MP D G W LLA V + +V+ +M E D
Sbjct: 154 DACALFDRMPVR-DAGSWNILLATLVRSGSVDKARELFGRMPERD 197
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/537 (37%), Positives = 326/537 (60%), Gaps = 7/537 (1%)
Query: 30 CGNFTPHSSNCLIRLF---STQYVFVNNAKISALS--RAGKISAARQLFDQMTTKDVITW 84
G F H + +R+F T+ + NA IS LS R AA L V+++
Sbjct: 56 AGYFRNHLPDAALRVFHRMPTRDLASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSF 115
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
+++ GY ++G L ++ LF+ MP +N +S+ ++ G +D R+D+A F MP ++
Sbjct: 116 TSLLRGYVRHGLLADAIQLFRQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVV 175
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
+ AM+SG+ + GR++EA LF++MP+RNV+S+TAM+ G+ + G+V+ AR L + M +N
Sbjct: 176 AWTAMLSGYCQVGRVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPERN 235
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
VSWT M+ GY++ R +A ELF MPD+ + MI GF + GM++ A+ +F+R+
Sbjct: 236 EVSWTAMLFGYIQAGRIEDAEELFNAMPDHP--LAACNGMIVGFGQQGMVDAAKSVFDRM 293
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+D +++A+I Y QN EAL F M+ + ++P+ +++S+ T C+AL +L+ GR
Sbjct: 294 CERDDGTWSAIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGR 353
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
+ H ++R F+ ++ +A+ITMY +CG + ++ F ++V WN++I +AQHG
Sbjct: 354 EVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHG 413
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
E+AL F M L G PDGIT++ L+AC + GKV E D+F M GI P EHY
Sbjct: 414 LGEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHY 473
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+VD+L RAG +++A + + MP E D +WG+L+ AC ++ N E+ E++AKK+ EL+P
Sbjct: 474 ACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLLELEP 533
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
N+ YV+LS++Y ++G W D + +R + + + K SWIE +VH F GD+
Sbjct: 534 GNAGPYVLLSHIYTSSGRWEDASNMRKFISSRHLNKSLGCSWIEYDKRVHLFKSGDV 590
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/570 (35%), Positives = 336/570 (58%), Gaps = 34/570 (5%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVI------------------------ 82
+ +V N +++ L+ AG++S AR+LFD+ +DV+
Sbjct: 32 SNHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDR 91
Query: 83 --------TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDY 134
TW A+++GY + G + E++ LF MP +N+VSWN M+ + R+ DA
Sbjct: 92 PDARRNVVTWTALLSGYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTL 151
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
F MP R+ ++N +++ ++ G +++A +LF++MP RNV+++T M+ G + G V++AR
Sbjct: 152 FNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEAR 211
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
AL D M +NVVSW MI+GY +N EA +LF +MP D + + MITGF + L
Sbjct: 212 ALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNI--MITGFIQNKNL 269
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E A+ LF+++ ++ V++ M+ GY Q+ +E AL+LF+GM+ ++P+ T + AC
Sbjct: 270 ERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDAC 329
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
S L L+EG+Q H ++ + F+ + + + ++ +Y++CG I+ + F +++SWN
Sbjct: 330 SNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWN 389
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+IAA+A HG +A+ + +M NG+ P+ +T++ LLSAC H+G V+E + +FE MVK
Sbjct: 390 GMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKD 449
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
I EHYTCL+D+ SRAG+L A ++ + E + VW +LL C + N +G+L
Sbjct: 450 RSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDL 509
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
AA+ + E +P N+ Y +L N+YA+AG W++ ++R M ++G+ KQ SWIE+ NKVH
Sbjct: 510 AARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVH 569
Query: 555 YFLGGDMSHPCIDKIHLELKRASVQMKSVD 584
F+ D SH D I+ L+ M+ D
Sbjct: 570 VFVSRDKSHSESDLINSLLQDIHDIMRMAD 599
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 18 PPILRILSTPDSCGNFTPHSSNCLIR--LFSTQY---VFVNNAKISALSRAGKISAARQL 72
P + L D+C N S + + T + F+ + ++ ++ G+I AR++
Sbjct: 317 PNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKV 376
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRI 128
F+ KDVI+WN +I Y +G E+ +L++ M N V++ +++ C + +
Sbjct: 377 FNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLV 436
Query: 129 DDAFDYFQAM-PERNTAT----YNAMISGFLKHGRLEEATRLFEQM---PRRNVISYTAM 180
D+ F+ M +R+ A Y +I + GRL +A RL + P V + A+
Sbjct: 437 DEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTV--WNAL 494
Query: 181 LDGFMKKGEVD----KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
L G G AR L + N ++T++ Y ++ EA ++ M D
Sbjct: 495 LGGCNSHGNESIGDLAARNLLE-AEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMND 550
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 313/494 (63%), Gaps = 2/494 (0%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G + +A F ++ T +V++W +++G+ G + E++NLF MP KN+VSWN MI +
Sbjct: 216 GDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYV 275
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
++IDDA+ F MPE+++ ++ AMI+G+++ G+L +A + MP +N+ + TAM++G
Sbjct: 276 RENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMING 335
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTA 243
+++ G +D+A + +S ++ V W MITGY R EA LF M K++
Sbjct: 336 YLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEM--VCKDMVSWNT 393
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
MI + + G ++ A +F +Q ++ VS+N++I GY QNG+ EAL F M + +PD
Sbjct: 394 MIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPD 453
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
T+V A + L LN G Q H L I+ GF ++ V NA++TMY++ G + ++E F
Sbjct: 454 QTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFA 513
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+I + ++VSWN++IA +A +G ++A+ F M L G PD +TF LLSAC H G V++
Sbjct: 514 EIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQ 573
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
++LF+ M + Y I P SEHY C++++L R G+LE+A +I QGM + +WG+LL AC
Sbjct: 574 GLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWAC 633
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
I+ N+EL + +A+++ L+PQN++ YV+LSN++A AG W V RVR+LMKE KQ
Sbjct: 634 RIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPG 693
Query: 544 YSWIEIGNKVHYFL 557
SWIEI N++H FL
Sbjct: 694 CSWIEIDNQLHCFL 707
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 227/453 (50%), Gaps = 62/453 (13%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
YVF N +IS L R+G+I A +F QMT ++++T+N++I+ Y +NG + ++ LF MP
Sbjct: 14 YVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMP 73
Query: 109 VKNIVSWNCMIAGCIDNDRIDDA---FD----------------------------YFQA 137
+N+VSWN MIAG + N+ ++DA FD F
Sbjct: 74 QRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNL 133
Query: 138 MPER-NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
+P++ +T NA+I+G+ K EA +LF++M +NV+S+ ++L G+ K G++
Sbjct: 134 LPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQF 193
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+ M +NVVSW +M+ GYV A F ++P NV M++GF G +
Sbjct: 194 FEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIP--TPNVVSWVTMLSGFAHYGRMTE 251
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL---VSVFTA 313
AR LF + K+ VS+NAMI Y + ++A +LF M + D A + V V
Sbjct: 252 ARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKL 311
Query: 314 CSALQLLN-------------------EGRQSHVLVIRNGFEANVSVC-NAVITMYSRCG 353
A ++LN GR I + SVC N++IT Y+ CG
Sbjct: 312 LQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCG 371
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
++ F+++ ++VSWNT+IAA+AQ G +KAL F++M + + +++ SL++
Sbjct: 372 RTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQ----ERNVVSWNSLIT 427
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
G E+++ F LM K G P C
Sbjct: 428 GYVQNGLYFEALNCFILM-KQQGEKPDQTTIVC 459
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 133/274 (48%), Gaps = 24/274 (8%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++ L + + A I+ ++G++ A ++F Q++ +D + WN++ITGY G E+
Sbjct: 317 ILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEA 376
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
LFQ M K++VSWN MIA ++D A + F M ERN ++N++I+G++++G
Sbjct: 377 LRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYF 436
Query: 161 EATRLFEQM------PRRNVI-------SYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
EA F M P + I + A L+ ++ + + + KN +
Sbjct: 437 EALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAI- 495
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+T Y K+ R EA +F + +K+V ++I G+ G + A LFE + +
Sbjct: 496 ----LTMYAKSGRVPEAENVFAEIK--NKDVVSWNSLIAGYALNGCGKEAVELFEVMPLR 549
Query: 268 ----DCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
D V+F +++ G ++ L LF M +
Sbjct: 550 GIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTE 583
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 312/494 (63%), Gaps = 2/494 (0%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G + +A F ++ T +V++W +++G+ G + E++NLF MP KN+VSWN MI +
Sbjct: 216 GDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYV 275
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
++IDDA+ F MPE+++ ++ AMI+G+++ G+L +A + MP +N+ + TAM++G
Sbjct: 276 RENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMING 335
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTA 243
+++ G +D+A + +S ++ V W MITGY R EA LF M K++
Sbjct: 336 YLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEM--VCKDMVSWNT 393
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
MI + + G ++ A +F +Q ++ VS+N++I GY QNG+ EAL F M + +PD
Sbjct: 394 MIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPD 453
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
T+V A + L LN G Q H L I+ GF ++ V NA++TMY++ G + ++E F
Sbjct: 454 QTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFA 513
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+I ++VSWN++IA +A +G ++A+ F M L G PD +TF LLSAC H G V++
Sbjct: 514 EIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQ 573
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
++LF+ M + Y I P SEHY C++++L R G+LE+A +I QGM + +WG+LL AC
Sbjct: 574 GLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWAC 633
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
I+ N+EL + +A+++ L+PQN++ YV+LSN++A AG W V RVR+LMKE KQ
Sbjct: 634 RIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPG 693
Query: 544 YSWIEIGNKVHYFL 557
SWIEI N++H FL
Sbjct: 694 CSWIEIDNQLHCFL 707
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 227/453 (50%), Gaps = 62/453 (13%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
YVF N +IS L R+G+I A +F +MT ++++T+N++I+ Y +NG + ++ LF MP
Sbjct: 14 YVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMP 73
Query: 109 VKNIVSWNCMIAGCIDNDRIDDA---FD----------------------------YFQA 137
+N+VSWN MIAG + N+ ++DA FD F
Sbjct: 74 QRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNL 133
Query: 138 MPER-NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
+P++ +T NA+I+G+ K EA +LF++M +NV+S+ ++L G+ K G++
Sbjct: 134 LPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQF 193
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+ M +NVVSW +M+ GYV A F ++P NV M++GF G +
Sbjct: 194 FEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIP--TPNVVSWVTMLSGFAHYGRMTE 251
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL---VSVFTA 313
AR LF + K+ VS+NAMI Y + ++A +LF M + D A + V V
Sbjct: 252 ARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKL 311
Query: 314 CSALQLLN-------------------EGRQSHVLVIRNGFEANVSVC-NAVITMYSRCG 353
A ++LN GR I + SVC N++IT Y+ CG
Sbjct: 312 LQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCG 371
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
++ F+++ ++VSWNT+IAA+AQ G +KAL F++M + + +++ SL++
Sbjct: 372 RTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQ----ERNVVSWNSLIT 427
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
G E+++ F LM K G P C
Sbjct: 428 GYVQNGLYFEALNCFILM-KQQGEKPDQTTIVC 459
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 48/302 (15%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++ L + + A I+ ++G++ A ++F Q++ +D + WN++ITGY G E+
Sbjct: 317 ILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEA 376
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
LFQ M K++VSWN MIA ++D A + F M ERN ++N++I+G++++G
Sbjct: 377 LRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYF 436
Query: 161 EATRLFEQMPRR---------------------------------------NVISYTAML 181
EA F M ++ ++ A+L
Sbjct: 437 EALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAIL 496
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP--DYDKNVF 239
+ K G V +A + + K+VVSW +I GY N EA ELF MP +
Sbjct: 497 TMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEV 556
Query: 240 VVTAMITGFCKVGMLENARLLFE------RIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
T +++ G ++ LF+ I+P+ + +I + G EEA+ +
Sbjct: 557 TFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQS-EHYACVINLLGRVGRLEEAVEIVQ 615
Query: 294 GM 295
GM
Sbjct: 616 GM 617
>gi|51535392|dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51535558|dbj|BAD37476.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 908
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/566 (37%), Positives = 320/566 (56%), Gaps = 54/566 (9%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
A SA ++AAR+LFD+M +DV+TWN ++ Y + G + E++ LF MP +N S
Sbjct: 106 AAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAAS 165
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA------------ 162
WN M+ G ++ A D F AMP +++A+ + M+SGF K+G L EA
Sbjct: 166 WNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTD 225
Query: 163 ------------------------TRLFEQMPR--------------RNVISYTAMLDGF 184
RLF+ +P+ RNV+S+ +M+ +
Sbjct: 226 MDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICY 285
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAM 244
+K G+V ARAL + M K++VSW MI+GY + E+ +LF+ MPD D + + +
Sbjct: 286 IKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNL--I 343
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
I GF + G E+AR F+R+ + +S+N MI+GY +NG +++LFS M+++ PD
Sbjct: 344 IQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDR 403
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
T SV AC+++ +L G Q H LV ++ F + ++ NA+ITMYSRCG + D+E F+Q
Sbjct: 404 HTFSSVLAACASIPMLGLGAQIHQLVEKS-FVPDTAISNALITMYSRCGALNDAEAIFKQ 462
Query: 365 IHSP-NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+H+ +LVSWN +I + HG KAL F +M P ITF+SLLSAC +AG V+E
Sbjct: 463 MHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSE 522
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+F+ MV YGI+ EHY LV+++ R GQL+ A ++ MP D VWG+ L AC
Sbjct: 523 GRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGAC 582
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
N L ++AAK++ ++P +SA YV++ NL+A G W VR M+ QG+ KQ
Sbjct: 583 TAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPG 642
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKI 569
YSWI++ K+H F+ GD HP +I
Sbjct: 643 YSWIDLEGKMHVFISGDTWHPNAQEI 668
>gi|297605437|ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group]
gi|255676854|dbj|BAF19125.2| Os06g0228900 [Oryza sativa Japonica Group]
Length = 695
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/566 (37%), Positives = 320/566 (56%), Gaps = 54/566 (9%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
A SA ++AAR+LFD+M +DV+TWN ++ Y + G + E++ LF MP +N S
Sbjct: 70 AAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAAS 129
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA------------ 162
WN M+ G ++ A D F AMP +++A+ + M+SGF K+G L EA
Sbjct: 130 WNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTD 189
Query: 163 ------------------------TRLFEQMPR--------------RNVISYTAMLDGF 184
RLF+ +P+ RNV+S+ +M+ +
Sbjct: 190 MDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICY 249
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAM 244
+K G+V ARAL + M K++VSW MI+GY + E+ +LF+ MPD D + + +
Sbjct: 250 IKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNL--I 307
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
I GF + G E+AR F+R+ + +S+N MI+GY +NG +++LFS M+++ PD
Sbjct: 308 IQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDR 367
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
T SV AC+++ +L G Q H LV ++ F + ++ NA+ITMYSRCG + D+E F+Q
Sbjct: 368 HTFSSVLAACASIPMLGLGAQIHQLVEKS-FVPDTAISNALITMYSRCGALNDAEAIFKQ 426
Query: 365 IHSP-NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+H+ +LVSWN +I + HG KAL F +M P ITF+SLLSAC +AG V+E
Sbjct: 427 MHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSE 486
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+F+ MV YGI+ EHY LV+++ R GQL+ A ++ MP D VWG+ L AC
Sbjct: 487 GRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGAC 546
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
N L ++AAK++ ++P +SA YV++ NL+A G W VR M+ QG+ KQ
Sbjct: 547 TAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPG 606
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKI 569
YSWI++ K+H F+ GD HP +I
Sbjct: 607 YSWIDLEGKMHVFISGDTWHPNAQEI 632
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQM-TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
++NA I+ SR G ++ A +F QM T KD+++WNA+I Y +G ++ LF+ M
Sbjct: 403 ISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRA 462
Query: 111 NI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEE 161
+ +++ +++ C++ + + F M Y A+++ +HG+L++
Sbjct: 463 KVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDD 522
Query: 162 ATRLFEQMP 170
A + MP
Sbjct: 523 ALEVINSMP 531
>gi|357438957|ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 891
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 353/619 (57%), Gaps = 49/619 (7%)
Query: 6 YFHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVN----NAKISALS 61
Y+H +++ + P L+I + P +N IR ST + N IS L
Sbjct: 5 YYHLSHI--FINLPKLKITHC------YYPFQNNLRIRSSSTATLTSEMKRCNYFISKLC 56
Query: 62 RAGKISAARQLFDQMTTKD--------------------------------VITWNAIIT 89
R GK++ AR++FD+M+ +D VI W A+++
Sbjct: 57 REGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVS 116
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
GY + ++E++ LF MPV+N+VSWN MI G N R +A D F MPERN ++N +
Sbjct: 117 GYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTV 176
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
++ GR+++A RLF +M R+V+S+T M+ G K G VD AR + D M +NVVSW
Sbjct: 177 MTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWN 236
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
MI GY +N RF EA +LF RMP+ D + M+TGF + G L A LF + K+
Sbjct: 237 AMIAGYAQNGRFDEALKLFERMPERDMPSW--NTMVTGFIQNGDLNRAEQLFHAMPQKNV 294
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHV 328
+++ AM+ GY Q+G++EEAL+LF+ M D ++P T V+V ACS L L EG+Q H
Sbjct: 295 ITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQ 354
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP--NLVSWNTIIAAFAQHGHY 386
++ + F+ + V +A+I MYS+CG ++ F S +L++WN +IAA+A HG+
Sbjct: 355 MISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYG 414
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
+A+ F++M GF + +T++ LL+AC HAG +E F+ ++K I +HYTC
Sbjct: 415 NEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVREDHYTC 474
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
L+D+ RAG+L++A I +G+ E +WG+LLA C ++ N ++G+L A K+ +++P+N
Sbjct: 475 LIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKVLKMEPEN 534
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
+ Y++ SN+YA+ GM + VR+ MK++G+ KQ SWI++GN V F+ D SH
Sbjct: 535 ADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNTVQVFVVNDKSHSQF 594
Query: 567 DKIHLELKRASVQMKSVDD 585
+ + L +MK D
Sbjct: 595 EMLKYLLLDLHTKMKKNRD 613
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 26/186 (13%)
Query: 127 RIDDAFDYFQAMPERN----TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
R+D+A M + TY +I G GRL E +FE+M + + D
Sbjct: 719 RVDEAIGLMTEMEGKGLRAYDETYECVIVGCADSGRLNECWSVFEEMLSVGFVPSGLLFD 778
Query: 183 GFMKK---GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
+K GEV+K ++D ++ ++ G++ ++ + E E P +
Sbjct: 779 KVAEKLCDGEVEK---VNDMLT-------VLLDKGFLPSDIYYEM-EYKSMCPGFS---- 823
Query: 240 VVTAMITGFCKVGMLENA----RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
V ++MI FC + +++A R++ R + + +IA + Q G E AL+L + M
Sbjct: 824 VYSSMIQCFCHLDKVDDAEKYLRIMKGRSLAPNVSIYEKLIADHMQKGNDESALQLRNEM 883
Query: 296 IKMDMQ 301
+ +Q
Sbjct: 884 ASLKLQ 889
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/531 (37%), Positives = 320/531 (60%), Gaps = 4/531 (0%)
Query: 55 AKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
A +SA +R G + AR LFD+ + +V+TW A+++GY + G + E++ LFQ MP +N+V
Sbjct: 76 ALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYARAGLVDEAEVLFQRMPQRNVV 135
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN M+ R DA F MP R+ ++N +++ ++ G +++A LF +MP R+
Sbjct: 136 SWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLVRSGSVDKARELFGRMPERD 195
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V+++T M+DG + G VD+AR L D M +NVVSW MI+GY +N R EA +LF +MP
Sbjct: 196 VMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKMPH 255
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D + MITGF + L+ AR LF+ + ++ V++ M+ GY + +E +L LF
Sbjct: 256 RD--IASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFR 313
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
GM+ ++P+ T + ACS L L EG+Q H ++ + F+ + V +A++ +Y++CG
Sbjct: 314 GMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCG 373
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ + F +L+SWN IIAA+A HG +A+ + +M NG+ P+ +T++ LLS
Sbjct: 374 EVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLS 433
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H+G V+E + +FE MV I EHYTCL+D+ SRAG+L+ A ++ + + +
Sbjct: 434 ACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPAS 493
Query: 474 G-VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
G VW +LL C + N +G LAA+ + + +P N+ Y +LSN+YA+AG W++ +R
Sbjct: 494 GSVWSALLGGCNAHGNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSE 553
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
M +G+ KQ SWIE+ NKVH F+ D SH D I+ L+ M+ V
Sbjct: 554 MNNRGLKKQPGCSWIEVANKVHVFVARDKSHSESDLIYGLLQNIHYMMRIV 604
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 211/419 (50%), Gaps = 43/419 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + A + AG+ A LFD+M +D +WN ++ ++G + +++ LF MP ++++
Sbjct: 138 NTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLVRSGSVDKARELFGRMPERDVM 197
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+W M+ G + +D+A F +MPERN ++NAMISG+ ++ RL+EA LF +MP R+
Sbjct: 198 AWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRD 257
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER------------- 220
+ S M+ GF++ ++ +AR L D M +NVV+WT M+ GY+K ++
Sbjct: 258 IASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLM 317
Query: 221 ----------------------FCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLEN 256
CE +++ + + + FV +A++ + K G +
Sbjct: 318 SGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGL 377
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR LF+ + KD +S+N +IA YA +GV EA+ L+ M +P+D T V + +ACS
Sbjct: 378 ARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSH 437
Query: 317 LQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSE--LAFRQIHSPNLVSW 373
L++EG + +V +I + SR G + D++ + + +I + W
Sbjct: 438 SGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVW 497
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC-GHAGKVNESMDLFELM 431
+ ++ HG+ +++ + L +PD +LLS AGK E+ ++ M
Sbjct: 498 SALLGGCNAHGN--ESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEM 554
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
FV +A ++ ++ G++ AR+LFD KD+I+WN II Y +G E+ +L++ M
Sbjct: 359 TFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQG 418
Query: 109 ---VKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-PERNTAT----YNAMISGFLKHGRLE 160
N V++ +++ C + +D+ F++M +R+ A Y +I + GRL+
Sbjct: 419 NGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLD 478
Query: 161 EATRLFEQM 169
+A RL +
Sbjct: 479 DAKRLIHYL 487
>gi|356532382|ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 669
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/527 (38%), Positives = 320/527 (60%), Gaps = 6/527 (1%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V +A I ++ G++ AR++FD MT ++ +W ++I+GY+ G ++E+ +LF MP
Sbjct: 127 VVAESAMIDGYAKVGRLDDARKVFDNMTQRNAFSWTSLISGYFSCGKIEEALHLFDQMPE 186
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+N+VSW ++ G N +D A +F MPE+N + AM+ +L +G EA +LF +M
Sbjct: 187 RNVVSWTMVVLGFARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEM 246
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P RNV S+ M+ G ++ VD+A L + M +N VSWT M++G +N+ AR+ F
Sbjct: 247 PERNVRSWNIMISGCLRANRVDEAIGLFESMPDRNHVSWTAMVSGLAQNKMIGIARKYFD 306
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
MP D + TAMIT G+++ AR LF++I K+ S+N MI GYA+N EAL
Sbjct: 307 LMPYKDMAAW--TAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEAL 364
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF M++ +P++ T+ SV T+C + E Q+H +VI GFE N + NA+IT+Y
Sbjct: 365 NLFVLMLRSCFRPNETTMTSVVTSCDGMV---ELMQAHAMVIHLGFEHNTWLTNALITLY 421
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
S+ G + + L F Q+ S ++VSW +I A++ HGH AL F++M ++G PD +TF+
Sbjct: 422 SKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSGIKPDEVTFV 481
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
LLSAC H G V++ LF+ + Y + P +EHY+CLVDIL RAG +++A + +P
Sbjct: 482 GLLSACSHVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVDILGRAGLVDEAMDVVATIPP 541
Query: 470 EA-DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTR 528
A D V +LL AC ++ +V + +K+ EL+P +S YV+L+N YAA G W + +
Sbjct: 542 SARDEAVLVALLGACRLHGDVAIANSIGEKLLELEPSSSGGYVLLANTYAAEGQWDEFAK 601
Query: 529 VRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
VR M+E+ V + YS I+I K H F+ G+ SHP I++I+ L++
Sbjct: 602 VRKRMRERNVKRIPGYSQIQITGKNHVFVVGERSHPQIEEIYRLLQQ 648
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 98/240 (40%), Gaps = 49/240 (20%)
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
IT + G L+ AR LF+ + +D VS+N+MIA Y +N EA +F M
Sbjct: 72 ITILGRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKEMP-------- 123
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
+ NV +A+I Y++ G + D+ F
Sbjct: 124 -------------------------------QRNVVAESAMIDGYAKVGRLDDARKVFDN 152
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ N SW ++I+ + G E+AL F QM + + +++ ++ G ++ +
Sbjct: 153 MTQRNAFSWTSLISGYFSCGKIEEALHLFDQMP----ERNVVSWTMVVLGFARNGLMDHA 208
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
F LM + I +T +V G +A+++ MP E + W +++ C+
Sbjct: 209 GRFFYLMPEKNIIA-----WTAMVKAYLDNGCFSEAYKLFLEMP-ERNVRSWNIMISGCL 262
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I L ++ NA I+ S++G + +AR +F+Q+ +KDV++W A+I Y +G +
Sbjct: 402 VIHLGFEHNTWLTNALITLYSKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHA 461
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMIS 151
+F M V I V++ +++ C + F ++ T Y+ ++
Sbjct: 462 LQVFARMLVSGIKPDEVTFVGLLSACSHVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVD 521
Query: 152 GFLKHGRLEEATRLFEQMP--RRNVISYTAMLDGFMKKGEVDKARALSDYM 200
+ G ++EA + +P R+ A+L G+V A ++ + +
Sbjct: 522 ILGRAGLVDEAMDVVATIPPSARDEAVLVALLGACRLHGDVAIANSIGEKL 572
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 326/538 (60%), Gaps = 12/538 (2%)
Query: 43 RLFST---QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
+LF T + + +A I ++AG + +A+++FD M +V +W ++I+GY+++G + +
Sbjct: 121 KLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAK 180
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+ LF MP KN+VSW M+ G N ID A F MPE+NT ++ AM+ ++ +GR
Sbjct: 181 ACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRT 240
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
+EA +LF +MP+RN+ S+ M+ G + V++A L M +N VSWT+M++G +N
Sbjct: 241 DEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNG 300
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
ARE F +MP +K++ AMIT + ++ A LF + ++ V++NAMI GY
Sbjct: 301 FTKLAREYFDQMP--NKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDGY 358
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC-SALQLLNEGRQSHVLVIRNGFEAN 338
A++ EA++ M++ ++P++ T+ + T+C L+L+ Q+H L I G E
Sbjct: 359 ARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLELM----QAHALAIVVGCECE 414
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
S+ NA+ITMYSR G I S +AF + + ++VSW ++ AF HGH + AL F M
Sbjct: 415 TSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLK 474
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+G PD ITF+ +LSAC HAG V + LF+ M + YG+ P +EHY+CLVDIL RAGQ+
Sbjct: 475 SGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVH 534
Query: 459 KAWQITQGMP-FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
+A + MP E D V G+LL AC ++ NVE+ + +K+ EL P +S YV+L+N++
Sbjct: 535 EAMDVVWKMPECERDGAVLGALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVF 594
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
AA G W + VR MK++ V K +S IE+ K H F GD SHP +++I+ EL R
Sbjct: 595 AARGNWDEFAEVRKKMKDRNVRKVPGFSQIEVKGKCHAFFAGDKSHPQVEEIY-ELLR 651
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 169/344 (49%), Gaps = 20/344 (5%)
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
T D+ N I+ + G ++ ++ LF MP + VS+ MI + N+ + A FQ
Sbjct: 65 TVLDIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQ 124
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
MP+R +AMI G+ K G ++ A ++F+ M NV S+T+++ G+ + G+V KA L
Sbjct: 125 TMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQL 184
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
D M KNVVSWT M+ GY +N +AR +F +MP +KN TAM+ + G +
Sbjct: 185 FDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMP--EKNTISWTAMMKSYVDNGRTDE 242
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS- 315
A LF + ++ S+N MI+G EA +LF L+ + A S
Sbjct: 243 ALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFH-------------LMPLRNAVSW 289
Query: 316 ALQLLNEGRQSHVLVIRNGFE----ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
+ + R + R F+ +++ NA+IT Y I+++ F + N+V
Sbjct: 290 TIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNIV 349
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+WN +I +A+H +A+ M + P+ T +L++C
Sbjct: 350 TWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSC 393
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/551 (37%), Positives = 329/551 (59%), Gaps = 38/551 (6%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F Q + + N +S + G + AR++FD+M K+V++W A+I Y ++ QE+ F
Sbjct: 95 FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154
Query: 105 QSMP----VKNIVSWNCMIAGCID-------NDRI------------------------- 128
M N ++ ++ C D +D I
Sbjct: 155 YEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCI 214
Query: 129 DDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ A + F MP+R+ ++NAMI+G++++G +E+A +LF+++P+R+VI++ M+ G+ + G
Sbjct: 215 EFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCG 274
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGF 248
+V+ A L + M +N+VSW MI GYV+N EA +LF MP+ +NV A+I+GF
Sbjct: 275 DVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPE--RNVISWNAVISGF 332
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
+ G +E A LF+ + + VS+NAMIAGY+QNG AE AL+LF M +DM+P+ T
Sbjct: 333 AQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFA 392
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
V AC+AL +L +G ++H +VIR+GF+++V V N ++ MY++CG I D+ F ++
Sbjct: 393 IVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQ 452
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
+ S + +I +A +G +++L F QM G PD +TF+ +LSAC HAG V+E F
Sbjct: 453 DSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYF 512
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
++M + Y I P+ EHY C++D+L RAG ++A + MP + D +WGSLL+AC + N
Sbjct: 513 DIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNN 572
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
++LGE A+ + L+PQN A YV+LSN+YAAAG W D+ VR MK++ V K+ SWI
Sbjct: 573 IDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIV 632
Query: 549 IGNKVHYFLGG 559
I +VH FL G
Sbjct: 633 IKKQVHAFLVG 643
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 203/427 (47%), Gaps = 70/427 (16%)
Query: 127 RIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPR-----RNVISY 177
R+ +A Q M E +++TY++++ G L L +A L M + +++
Sbjct: 44 RLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLG 103
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD---- 233
++ ++K G + +AR + D M KNVVSWT MI Y ++E EA FY M D
Sbjct: 104 NKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQ 163
Query: 234 ------------------------------YDKNVFVVTAMITGFCKVGMLENARLLFER 263
++ NVFV ++ + K G +E AR LF++
Sbjct: 164 PNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDK 223
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC----SALQL 319
+ +D VS+NAMIAGY QNG+ E+AL+LF + K D+ + T+++ + C +A++L
Sbjct: 224 MPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWN-TMMAGYAQCGDVENAVEL 282
Query: 320 LNEGRQSHVL--------VIRNGF------------EANVSVCNAVITMYSRCGGILDSE 359
+ + +++ ++NG E NV NAVI+ +++ G + ++
Sbjct: 283 FEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEAL 342
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F+ + N+VSWN +IA ++Q+G E AL F QM + P+ TF +L AC
Sbjct: 343 KLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALA 402
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ + + E++++ G LV + ++ G +E A ++ M + D+ ++
Sbjct: 403 VLEQGNEAHEVVIR-SGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMR-QQDSASLSAM 460
Query: 480 LAACVIN 486
+ IN
Sbjct: 461 IVGYAIN 467
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 123/288 (42%), Gaps = 47/288 (16%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L ++ + V NA IS ++ G++ A +LF M +V++WNA+I GY QNG + +
Sbjct: 313 LFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENA 372
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
LF M + ++ + NT T+ ++ LE
Sbjct: 373 LKLFGQMQMVDM---------------------------KPNTETFAIVLPACAALAVLE 405
Query: 161 EATRLFEQMPR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
+ E + R +V+ ++ + K G ++ AR + D M ++ S + MI GY
Sbjct: 406 QGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYA 465
Query: 217 KNERFCEARELFYRMP----DYDKNVFVVTAMITGFCKVGMLENARLLFE------RIQP 266
N E+ ELF +M D+ FV +++ C G+++ R F+ I P
Sbjct: 466 INGCSKESLELFEQMQFTGLKPDRVTFV--GVLSACCHAGLVDEGRQYFDIMTRFYHITP 523
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ MI + G +EA L + KM ++PD S+ +AC
Sbjct: 524 A-MEHYGCMIDLLGRAGCFDEANDLIN---KMPIKPDADMWGSLLSAC 567
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/478 (41%), Positives = 293/478 (61%), Gaps = 21/478 (4%)
Query: 88 ITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN 147
+ GY+QN +E++ LF MP N +SWN +++G + N I +A F MPERN ++
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
AMI G+++ G +EEA LF +MP RNV+S+T ML G ++ G VD+AR L D M K+VV+
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVA 120
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
T MI G R EARE+F MP +NV T+MI+G K
Sbjct: 121 STNMIDGLCSEGRLIEAREIFDEMP--QRNVVAWTSMISG------------------EK 160
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D +++ MI Y + G EAL LFS M + ++P +++SV + C +L L+ GRQ H
Sbjct: 161 DDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVH 220
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
++R+ F+ ++ V + +ITMY +CG ++ ++ F + S ++V WN+IIA +AQHG E
Sbjct: 221 SQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGE 280
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
KAL F M + PD ITF+ +LSAC + GKV E +++FE M Y + P +EHY C+
Sbjct: 281 KALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACM 340
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
VD+L RAG+L +A + + MP EAD VWG+LL AC + N++L E+AAKK+ +L+P N+
Sbjct: 341 VDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNA 400
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL-GGDMSHP 564
Y++LSNLY++ W+DV +R M+ + + K SWIE+ KVH F GG SHP
Sbjct: 401 GPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHP 458
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 198/415 (47%), Gaps = 87/415 (20%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
AR+LFD+M + I+WN +++GY QNG + E++ +F MP +N+VSW MI G + I
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLI 72
Query: 129 DDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
++A F MPERN ++ M+ G ++ GR++EA +LF+ MP ++V++ T M+DG +G
Sbjct: 73 EEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEG 132
Query: 189 EVDKARALSDYMSFKNVVSWTVMITG-------------YVKNERFCEARELFYRM---- 231
+ +AR + D M +NVV+WT MI+G Y + EA LF M
Sbjct: 133 RLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREG 192
Query: 232 ---------------------------------PDYDKNVFVVTAMITGFCKVGMLENAR 258
+D +++V + +IT + K G L A+
Sbjct: 193 VRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAK 252
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F+R KD V +N++IAGYAQ+G E+AL +F M + PD+ T + V +ACS
Sbjct: 253 RVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTG 312
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
+ EG + I +S + Q+ P + ++
Sbjct: 313 KVKEGLE-----------------------------IFESMKSKYQV-DPKTEHYACMVD 342
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+ G +A+ M + + D I + +LL AC + ++++DL E+ K
Sbjct: 343 LLGRAGKLNEAMNLIENMPV---EADAIVWGALLGAC----RTHKNLDLAEIAAK 390
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 95/183 (51%), Gaps = 18/183 (9%)
Query: 14 RILFPPILRILSTPDSCGNFTP--HSSNCLIRLFSTQY---VFVNNAKISALSRAGKISA 68
R FP ++ +LS CG+ H +L +Q+ ++V++ I+ + G +
Sbjct: 194 RPSFPSVISVLSV---CGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVT 250
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCID 124
A+++FD+ ++KD++ WN+II GY Q+GF +++ +F M +I +++ +++ C
Sbjct: 251 AKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSY 310
Query: 125 NDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYT 178
++ + + F++M + T Y M+ + G+L EA L E MP + I +
Sbjct: 311 TGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWG 370
Query: 179 AML 181
A+L
Sbjct: 371 ALL 373
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 117/273 (42%), Gaps = 39/273 (14%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L + + V + I L G++ AR++FD+M ++V+ W ++I+G +G
Sbjct: 109 LFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDG----- 163
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT-ATYNAMIS-------- 151
+W+ MI +A F M ++ ++IS
Sbjct: 164 -------------TWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSL 210
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
L HGR + ++L ++ + ++ ++K G++ A+ + D S K++V W +
Sbjct: 211 ASLDHGR-QVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSI 269
Query: 212 ITGYVKNERFCEARELFYRM------PDYDKNVFVVTA-MITGFCKVGM--LENARLLFE 262
I GY ++ +A E+F+ M PD + V++A TG K G+ E+ + ++
Sbjct: 270 IAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQ 329
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ PK + M+ + G EA+ L M
Sbjct: 330 -VDPK-TEHYACMVDLLGRAGKLNEAMNLIENM 360
>gi|413952592|gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
Length = 683
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/587 (35%), Positives = 328/587 (55%), Gaps = 57/587 (9%)
Query: 37 SSNCLIRLFSTQYVFVNNAKISALSRA---GKISAARQLFDQMTTKDVITWNAIITGYWQ 93
++ C + + N +SA +R+ ++AAR+LF +M +D ++W+ ++ Y +
Sbjct: 85 AARCFFDAMPVRDIISWNTLLSAYARSLQPNDLAAARRLFYEMPQRDAVSWSTLLGAYTR 144
Query: 94 NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
G ++E++ LF MP +N SWN MI G ++ A + F AMP++++A+ +AM+SGF
Sbjct: 145 RGLMEEAQRLFDEMPHRNASSWNTMITGFFAVGQMRKALNVFAAMPDKDSASLSAMVSGF 204
Query: 154 LKHGRLEEA------------------------------------TRLFEQMPR------ 171
+++GRL EA RLF +P+
Sbjct: 205 IRNGRLHEADDLLTKRLTVMDMDKAVGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQHK 264
Query: 172 --------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
RNV+S+ +M+ +++ G+V ARAL D M K++VSW MI GY + E
Sbjct: 265 GHKRMVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPHKDLVSWNTMIAGYTQASEMEE 324
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
A +LF+ +PD D + + MI GF + G +E+AR F+R+ + +++N MI+GY QN
Sbjct: 325 AEKLFWEVPDPDAVTWNL--MIRGFTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNE 382
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+ ++LF M+++ +PD TL SV AC++L +L G Q H L I F + + N
Sbjct: 383 DYDSTIKLFQRMLEVGERPDHHTLSSVLAACASLAMLRLGAQLHQL-IEKSFLPDTATNN 441
Query: 344 AVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
A++TMYSRCG ++ ++ F +H+ ++VSWN +I + Q G+ +AL F +M
Sbjct: 442 ALMTMYSRCGELISAKAIFGHMHTQRDIVSWNALIGGYEQQGNATEALRLFEEMRSAKVM 501
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P ITF+SLLSACG+AG V+E +F MV YG+ S EHY LV+++ R GQLE A +
Sbjct: 502 PTHITFISLLSACGNAGLVSEGRVVFHTMVHDYGLAASVEHYAALVNLIGRHGQLEDALE 561
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ + MP D VWG+ L AC N L E+AA + ++DP +SA YV++ NL+A G
Sbjct: 562 LIKSMPIAPDRAVWGAFLGACTAKKNEPLAEMAANALSKIDPDSSAPYVLMHNLHAHEGR 621
Query: 523 WRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
W + VR M+ G+ K YSWI++ +KVH F+ GD SHP +I
Sbjct: 622 WGSASLVREDMERLGIHKHPGYSWIDLHDKVHVFISGDTSHPLTHEI 668
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 224/450 (49%), Gaps = 30/450 (6%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N + L R G+ SAAR+LFD + + V+TWN+++ + ++ ++ F +MPV++I
Sbjct: 39 HNRSLVGLLRRGRFSAARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDAMPVRDI 98
Query: 113 VSWNCMIAGCIDNDRIDD---AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+SWN +++ + + +D A F MP+R+ +++ ++ + + G +EEA RLF++M
Sbjct: 99 ISWNTLLSAYARSLQPNDLAAARRLFYEMPQRDAVSWSTLLGAYTRRGLMEEAQRLFDEM 158
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P RN S+ M+ GF G++ KA + M K+ S + M++G+++N R EA +L
Sbjct: 159 PHRNASSWNTMITGFFAVGQMRKALNVFAAMPDKDSASLSAMVSGFIRNGRLHEADDLLT 218
Query: 230 R---MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP--------------KDCVSF 272
+ + D DK V +I + + G + +AR LF I ++ VS+
Sbjct: 219 KRLTVMDMDKAVGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVSW 278
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N+M+ Y + G A LF M D+ + T+++ +T S ++ + +
Sbjct: 279 NSMMMCYIRTGDVCSARALFDEMPHKDLVSWN-TMIAGYTQASEMEEAEK-------LFW 330
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+ + N +I +++ G + + F ++ + ++WNT+I+ + Q+ Y+ +
Sbjct: 331 EVPDPDAVTWNLMIRGFTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKL 390
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M G PD T S+L+AC + L +L+ K + +P + L+ + S
Sbjct: 391 FQRMLEVGERPDHHTLSSVLAACASLAMLRLGAQLHQLIEKSF--LPDTATNNALMTMYS 448
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
R G+L A I M + D W +L+
Sbjct: 449 RCGELISAKAIFGHMHTQRDIVSWNALIGG 478
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 162/429 (37%), Gaps = 104/429 (24%)
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVV--------------------------- 206
V + L G +++G AR L D + ++VV
Sbjct: 36 VRQHNRSLVGLLRRGRFSAARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDAMPV 95
Query: 207 ----SWTVMITGYVKN---ERFCEARELFYRMPDYD------------------------ 235
SW +++ Y ++ AR LFY MP D
Sbjct: 96 RDIISWNTLLSAYARSLQPNDLAAARRLFYEMPQRDAVSWSTLLGAYTRRGLMEEAQRLF 155
Query: 236 -----KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+N MITGF VG + A +F + KD S +AM++G+ +NG EA
Sbjct: 156 DEMPHRNASSWNTMITGFFAVGQMRKALNVFAAMPDKDSASLSAMVSGFIRNGRLHEADD 215
Query: 291 LFSGMIK-MDMQPDDA-----TLVSVF-------TACSALQLLNEGRQSHVLVIRNGFEA 337
L + + MDM D A TL++ + A ++ + + H R FE
Sbjct: 216 LLTKRLTVMDM--DKAVGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQHKGHKRMVFER 273
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
NV N+++ Y R G + + F ++ +LVSWNT+IA + Q E+A F ++
Sbjct: 274 NVVSWNSMMMCYIRTGDVCSARALFDEMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVP 333
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII--------PSSEHYTCLVD 449
DPD +T+ ++ G V + F+ M + I +E Y +
Sbjct: 334 ----DPDAVTWNLMIRGFTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIK 389
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC----VINLNVELGELAAKKMRELDPQ 505
+ R ++ + D S+LAAC ++ L +L +L K
Sbjct: 390 LFQRMLEVGE----------RPDHHTLSSVLAACASLAMLRLGAQLHQLIEKSFLPDTAT 439
Query: 506 NSAVYVMLS 514
N+A+ M S
Sbjct: 440 NNALMTMYS 448
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/501 (39%), Positives = 320/501 (63%), Gaps = 6/501 (1%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVK-NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT 145
+IT Y +NG L +++NLF +P K N V N M+AG N + D+A F AMP ++ +
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVS 60
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV 205
+N+M++G+ ++G + + FE+M R+V+S+ M+DGF++ G+++ + + + N
Sbjct: 61 WNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNT 120
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
VSW M+ G+ + + EAR LF +MP +NV AMI + + ++ A LF +
Sbjct: 121 VSWVTMLCGFARFGKIAEARRLFDQMPI--RNVVAWNAMIAAYVQNCHVDEAISLFMEMP 178
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
K+ +S+ +I GY + G +EA +L + M + +PD +T ++C+ L L G+Q
Sbjct: 179 EKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN-KPDQSTFACGLSSCAHLAALQVGKQ 237
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H LV+++G+ ++ V NA+ITMY++CG I +EL F+ I ++VSWN++IAA+A +G+
Sbjct: 238 LHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGN 297
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+AL F +M + G PD +TF+ +LSAC H G +++ + LF+ MV+ Y I P +EHY
Sbjct: 298 GREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYA 357
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C+VD+L RAG+LE+A+Q+ +GM A+ G+WG+LL AC I+ N+EL + AA+K+ E +P
Sbjct: 358 CMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPH 417
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP- 564
++ YV+LSN+ A AG W +V RVR LMKE+G KQ +SWIE+ N+VH FL D +HP
Sbjct: 418 KTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPR 477
Query: 565 CIDKIHLELKRASVQMKSVDD 585
++ H+ L+ + M++ D
Sbjct: 478 AVELCHI-LRSLTAHMRNTGD 497
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 219/420 (52%), Gaps = 47/420 (11%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA ++ ++ + AR+LFD M KD+++WN+++TGY +NG ++ F+ M +++V
Sbjct: 31 NAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVV 90
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN M+ G ++ ++ ++++F+ +P NT ++ M+ GF + G++ EA RLF+QMP RN
Sbjct: 91 SWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRN 150
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP- 232
V+++ AM+ +++ VD+A +L M KN +SWT +I GYV+ + EAR+L +MP
Sbjct: 151 VVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPY 210
Query: 233 -----------------------------------DYDKNVFVVTAMITGFCKVGMLENA 257
Y ++FV A+IT + K G + +A
Sbjct: 211 RNKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSA 270
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
LLF+ I D VS+N++IA YA NG EAL+LF M + PD+ T V + +ACS +
Sbjct: 271 ELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHV 330
Query: 318 QLLNEG-RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH----SPNLVS 372
L+++G + +V E ++ + R G + E AF+ + + N
Sbjct: 331 GLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRL---EEAFQLVRGMKINANAGI 387
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC-GHAGKVNESMDLFELM 431
W ++ A HG+ E L F+ L F+P + LLS AG+ +E + LM
Sbjct: 388 WGALLGACRIHGNLE--LAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLM 445
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV+NA I+ ++ G IS+A LF + DV++WN++I Y NG +E+ LF M V
Sbjct: 251 LFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEV 310
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLE 160
+ + V++ +++ C ID F+ M E Y M+ + GRLE
Sbjct: 311 EGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLE 370
Query: 161 EATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKAR 194
EA +L M N + A+L G ++ A+
Sbjct: 371 EAFQLVRGMKINANAGIWGALLGACRIHGNLELAK 405
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/555 (37%), Positives = 318/555 (57%), Gaps = 35/555 (6%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK------- 101
+V +N +++ L+ AG++S AR+LFD M +DV++W A++ Y + G LQE++
Sbjct: 40 HVQDSNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPD 99
Query: 102 -------------------------NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
LF+ M +N+VSWN M+ R++DA F
Sbjct: 100 ARRNVVTWTALLSGYARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFN 159
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
MP R+ ++N ++ G ++ G LE A ++FE+MP R+V+S+T M+ G + G VD A L
Sbjct: 160 RMPVRDAGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVL 219
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
D M +NVVSW MI+GY +N R EA +LF +MP D V MITGF + L++
Sbjct: 220 FDAMPERNVVSWNAMISGYARNHRIEEALDLFTKMPIRD--VASWNIMITGFIQNKDLKS 277
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR LF+ + ++ +++ M+ GY Q +E AL+LF+ M+ +QP+ T + ACS
Sbjct: 278 ARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSN 337
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L EG+Q H ++ + + + V + ++ +Y++CG I + F +L+SWN I
Sbjct: 338 LAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGI 397
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
IAA+A HG +A+ + M NG+ P+ T++ LLSAC HAG V+E + +FE MVK
Sbjct: 398 IAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNS 457
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG-VWGSLLAACVINLNVELGELA 495
I+ EHYTCLVD+ SRAG+LE A ++ + + VW +LL C + N +G+LA
Sbjct: 458 IVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLA 517
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
AK + E +P N+ Y +L N+YA+AG W++ +R M +G+ KQ SWIE+ NKVH
Sbjct: 518 AKHLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVANKVHV 577
Query: 556 FLGGDMSHPCIDKIH 570
F+ D SH D I+
Sbjct: 578 FVSRDKSHSESDLIN 592
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/528 (37%), Positives = 310/528 (58%), Gaps = 50/528 (9%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N IS+ + G +S AR FD KD ++WN ++ Y +NG +QE+++LF S + +
Sbjct: 132 NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAI 191
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN ++AG + +I++A F MP+R+ ++N M+SG + G + EA RLF+ P R+
Sbjct: 192 SWNALMAGYVQCSQIEEAQKMFNRMPQRDVVSWNTMVSGHARRGDMAEARRLFDVAPIRD 251
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++TA++ G+ + G +++A+ + D M KN VSW M+ YV+ EA+ELF MP
Sbjct: 252 VFTWTAVVSGYAQNGMLEEAKRVFDAMPEKNAVSWNAMMAAYVQRRMMEEAKELFDAMPC 311
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+NV M+TG+ + GML+ AR +F+ + KD VS+ AM+A Y+Q G +EE L+LF
Sbjct: 312 --RNVASWNTMLTGYAQAGMLDEARAIFDMMPQKDAVSWAAMLAAYSQGGFSEETLQLFK 369
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M GR MY +CG
Sbjct: 370 EM---------------------------GR---------------------CAMYFKCG 381
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ ++ AF ++ ++VSWNT+IA +A+HG ++AL F M PD IT + +L+
Sbjct: 382 NMEEAHSAFEEMEERDIVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLA 441
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H+G V + + F M + +G+ EHYTC++D+L RAG+L++A + + MPFE D+
Sbjct: 442 ACSHSGLVEKGISYFYSMHRDFGVTAKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDS 501
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+WG+LL A I+ N ELG AA+K+ EL+P+N+ +YV+LSN+YA++G WRDV ++RL+M
Sbjct: 502 TMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRLMM 561
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
E+GV K +SWIE+ NKVH F GD HP + I+ L+ ++MK
Sbjct: 562 HERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYGFLEDLDIRMK 609
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Query: 43 RLFST---QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
RLF + VF A +S ++ G + A+++FD M K+ ++WNA++ Y Q ++E
Sbjct: 242 RLFDVAPIRDVFTWTAVVSGYAQNGMLEEAKRVFDAMPEKNAVSWNAMMAAYVQRRMMEE 301
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+K LF +MP +N+ SWN M+ G +D+A F MP+++ ++ AM++ + + G
Sbjct: 302 AKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFDMMPQKDAVSWAAMLAAYSQGGFS 361
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
EE +LF++M R AM + K G +++A + + M +++VSW MI GY ++
Sbjct: 362 EETLQLFKEMGR------CAM---YFKCGNMEEAHSAFEEMEERDIVSWNTMIAGYARHG 412
Query: 220 RFCEARELF--YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----F 272
EA E+F R + + ++ G++E F + V+ +
Sbjct: 413 FGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVTAKPEHY 472
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
MI + G +EA+ L M M +PD
Sbjct: 473 TCMIDLLGRAGRLDEAVNL---MKDMPFEPD 500
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 324/564 (57%), Gaps = 35/564 (6%)
Query: 33 FTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYW 92
F+ H + + + +V N +I+ L+ AG++ AR+LFD+ +DV++W A++ Y
Sbjct: 22 FSYHGAAAVFSTDAFSHVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYA 81
Query: 93 QNGFLQES--------------------------------KNLFQSMPVKNIVSWNCMIA 120
+ G L E+ + LF MP +N+VSWN M+
Sbjct: 82 RQGQLHEASALLHRPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLE 141
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
R+ A F MP R+ ++N +++ ++ G ++EA RLFE+MP RNV+S+T M
Sbjct: 142 AYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLFERMPERNVMSWTTM 201
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
+ G + G D+ARAL D M +NVVSW MI+GY +N R EA +LF MP+ D V
Sbjct: 202 ISGLARSGSADEARALFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNMPERD--VAS 259
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
MITGF + L+ A+ LF+ + ++ VS+ M+ G Q +E AL++F+GM+ +
Sbjct: 260 WNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGI 319
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+P+ T + A S L L+EG+Q H ++ + F+ + + ++++ +Y++CG I +
Sbjct: 320 RPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARK 379
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F +++SWN +IAA+A HG +A+ + +M N + P+ +T++ LLSAC H+G
Sbjct: 380 VFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGL 439
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG-VWGSL 479
V+E + +FE M K I EHY+CL+D+ SRAG+L+ A ++ G+ + + VW +L
Sbjct: 440 VDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSAL 499
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
L C + N +G+LAA+ + E +P N+ Y +LSN+YA+AG W++ ++R M ++G+
Sbjct: 500 LGGCNAHGNESIGDLAARNLLEAEPDNAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGLK 559
Query: 540 KQCAYSWIEIGNKVHYFLGGDMSH 563
KQ SWIE+ NKVH F+ D SH
Sbjct: 560 KQPGCSWIELANKVHVFVARDKSH 583
>gi|449433223|ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
gi|449487596|ref|XP_004157705.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 675
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 321/575 (55%), Gaps = 32/575 (5%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L R + VF N I L + G + A+ +FD M +DV++WN++I G +NG L+E+
Sbjct: 99 LFRRMPERDVFSYNTVIGGLMQCGDVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEA 158
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
LF MP+KN++SWN +I G ++ ++D A +YF M R+ ++ MISG + GRL+
Sbjct: 159 IQLFDGMPLKNVISWNLIIGGLVNCGKLDSAGEYFGKMSRRDLVSWTIMISGLCRAGRLD 218
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
EA LF MP ++ + AM+ G+++ G+++ A L M +N SW ++ G+V ++R
Sbjct: 219 EARGLFNNMPTKDARVWNAMMVGYIENGKIEMAEELFGIMPERNFGSWNKLVNGFVGSQR 278
Query: 221 FCEARELFYRMPD------------YDKNVFVV-----------------TAMITGFCKV 251
+AR+LF MPD Y +N V+ T +I G+ +
Sbjct: 279 VDDARKLFMEMPDKCQKTWNNIVLAYIRNGLVLQTHALLEKIPYGNIASWTNLIVGYFGI 338
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G + A +FE +Q KD +NA I G +N EE L+LF+ MI++ D AT S+
Sbjct: 339 GEVGMAVEIFESMQYKDTTVWNATIFGLGENDKGEEGLKLFTRMIRLGPCLDKATFTSIL 398
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
T CS L+ L GRQ+H L+++ GF V+V NA+I MY+RCG + + + F + +++
Sbjct: 399 TICSDLETLQLGRQTHALILKEGFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVI 458
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SWN++I FA HG+ E AL F +M L +P+ ITF+ +LSAC H G +++ F M
Sbjct: 459 SWNSMICGFAHHGNGEDALEMFEKMRLANIEPNHITFIGVLSACSHKGLIDKGRYYFNFM 518
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP---FEADTGVWGSLLAACVINLN 488
+ P EHYTCLVD+ R G +++A M E VWG+LL AC I+ N
Sbjct: 519 KNECSLRPLIEHYTCLVDLFGRFGLIDEALSFLAEMKAEEIEVPPSVWGALLGACRIHKN 578
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
++G +A +K+ E +P N+ VY++L+ +Y G + ++ MK GV KQ SWIE
Sbjct: 579 YDVGVIAGEKVLEKEPHNAGVYLILAEMYLRNGKRENAEKIFARMKNNGVKKQPGCSWIE 638
Query: 549 IGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+ N + FL GD S+P D+I +K ++++ +
Sbjct: 639 VNNCGYVFLSGDCSNPHFDRICSVVKLVNLEINGI 673
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 246/488 (50%), Gaps = 26/488 (5%)
Query: 37 SSNCLIRLFSTQYVFVN----NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYW 92
+S C ++ F N N++IS R G + A++LFD M ++++TWNA+I GY+
Sbjct: 29 TSTCRLQASHAPPTFPNLKLLNSEISNCMRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYF 88
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG 152
NG + +LF+ MP +++ S+N +I G + +D A D F MP R+ ++N+MI+G
Sbjct: 89 LNGRCSDGISLFRRMPERDVFSYNTVIGGLMQCGDVDGAKDIFDLMPFRDVVSWNSMIAG 148
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+++G LEEA +LF+ MP +NVIS+ ++ G + G++D A MS +++VSWT+MI
Sbjct: 149 CIRNGLLEEAIQLFDGMPLKNVISWNLIIGGLVNCGKLDSAGEYFGKMSRRDLVSWTIMI 208
Query: 213 TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+G + R EAR LF MP D V+ AM+ G+ + G +E A LF + ++ S+
Sbjct: 209 SGLCRAGRLDEARGLFNNMPTKDARVW--NAMMVGYIENGKIEMAEELFGIMPERNFGSW 266
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA--TLVSVFTACSALQLLNEGRQSHVLV 330
N ++ G+ + ++A +LF M+M PD T ++ A L+ Q+H L+
Sbjct: 267 NKLVNGFVGSQRVDDARKLF-----MEM-PDKCQKTWNNIVLAYIRNGLV---LQTHALL 317
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+ + N++ +I Y G + + F + + WN I ++ E+ L
Sbjct: 318 EKIPY-GNIASWTNLIVGYFGIGEVGMAVEIFESMQYKDTTVWNATIFGLGENDKGEEGL 376
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK--VYGIIPSSEHYTCLV 448
F++M G D TF S+L+ C + L++K G + S ++
Sbjct: 377 KLFTRMIRLGPCLDKATFTSILTICSDLETLQLGRQTHALILKEGFNGFVAVS---NAMI 433
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR--ELDPQN 506
++ +R G ++ A+ M + D W S++ + N E +KMR ++P +
Sbjct: 434 NMYARCGNMDCAFMEFSSMS-DRDVISWNSMICGFAHHGNGEDALEMFEKMRLANIEPNH 492
Query: 507 SAVYVMLS 514
+LS
Sbjct: 493 ITFIGVLS 500
>gi|242063912|ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
gi|241933076|gb|EES06221.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
Length = 603
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 317/550 (57%), Gaps = 37/550 (6%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
A ++ +R G+++ AR+LFD+M + V++WNA+I+GY NG + +++LF MP +N VS
Sbjct: 60 ALLTGYARCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVS 119
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE------------- 161
W MI+G + R+ +A + F P T+ NA++SG+ +HG L++
Sbjct: 120 WLMMISGYMKRKRVREAREIFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDL 179
Query: 162 ------------------ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
A RLF++MP ++ +S+TA++ G+++ G+VD A + M +
Sbjct: 180 VSWNAMITGYTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMPDR 239
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+V++W M++G+V +ER +A LF MPD D + ++ G+ + G ++ A F +
Sbjct: 240 DVLAWNTMMSGFVVSERLDDALRLFADMPDRD--LVSWNTILQGYVQQGDMDGATAWFRK 297
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ KD S+N +I+GY G AL L S M + +PD AT + CS+L L G
Sbjct: 298 MPEKDEASWNTLISGYKDEG----ALNLLSEMTQGGYRPDQATWSVAISICSSLAALGCG 353
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
R HV I+ GFE + V +++I+MYS+CG I ++ F I + V+WN +IA +A H
Sbjct: 354 RMVHVCTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYH 413
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +AL F +M +GF PD TFLS+LSAC H G + E F M + + +IP S+H
Sbjct: 414 GLAAEALTLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPRSDH 473
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y+C+VD+L R+G + +A+ T+ +P + W +L ++C + +++LGEL AK + +
Sbjct: 474 YSCMVDLLGRSGFVHQAYNFTRRIPSDLQINAWETLFSSCNAHGDIQLGELVAKNVLQSR 533
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P + +Y +LSN+YAA GMW VR LMKEQG+ K+ SWIE+ V F D +H
Sbjct: 534 PSDGGMYTLLSNIYAAKGMWSSAASVRGLMKEQGLKKETGCSWIELKGDVVSFSSNDKAH 593
Query: 564 PCIDKIHLEL 573
P I++I E+
Sbjct: 594 PLIEQICQEV 603
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 198/376 (52%), Gaps = 51/376 (13%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V NA +S + G + A LF +M T D+++WNA+ITGY + G +Q ++ LF MP K+
Sbjct: 150 VCNALLSGYAEHGYLKDAEDLFGRMQTPDLVSWNAMITGYTRAGMMQVAQRLFDEMPEKD 209
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
VSW ++ G + N +D A+ FQ MP+R+ +N M+SGF+ RL++A RLF MP
Sbjct: 210 TVSWTAIVRGYLQNGDVDAAWKVFQDMPDRDVLAWNTMMSGFVVSERLDDALRLFADMPD 269
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER----FCEAREL 227
R+++S+ +L G++++G++D A A M K+ SW +I+GY K+E E +
Sbjct: 270 RDLVSWNTILQGYVQQGDMDGATAWFRKMPEKDEASWNTLISGY-KDEGALNLLSEMTQG 328
Query: 228 FYRMPD-------------------------------YDKNVFVVTAMITGFCKVGMLEN 256
YR PD ++++ V++++I+ + K G++
Sbjct: 329 GYR-PDQATWSVAISICSSLAALGCGRMVHVCTIKTGFERDALVMSSLISMYSKCGLITE 387
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A +F+ I +D V++NAMIA YA +G+A EAL LF M K PD AT +SV +AC+
Sbjct: 388 ASQVFDLIVQRDTVTWNAMIATYAYHGLAAEALTLFDRMTKDGFSPDHATFLSVLSACAH 447
Query: 317 LQLLNEG-------RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP- 368
L EG +Q L+ R+ + ++ + R G + + R+I S
Sbjct: 448 KGYLYEGCHHFRSMQQDWNLIPRSDHYS------CMVDLLGRSGFVHQAYNFTRRIPSDL 501
Query: 369 NLVSWNTIIAAFAQHG 384
+ +W T+ ++ HG
Sbjct: 502 QINAWETLFSSCNAHG 517
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C I+ + V ++ IS S+ G I+ A Q+FD + +D +TWNA+I Y +G E
Sbjct: 359 CTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAE 418
Query: 100 SKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMI 150
+ LF M ++ +++ C + + +F++M + + Y+ M+
Sbjct: 419 ALTLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPRSDHYSCMV 478
Query: 151 SGFLKHGRLEEATRLFEQMP 170
+ G + +A ++P
Sbjct: 479 DLLGRSGFVHQAYNFTRRIP 498
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/578 (35%), Positives = 314/578 (54%), Gaps = 63/578 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V NA+I+ L RAG I AR FD M + ++NA+I GY++N + LF MP
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76
Query: 110 KNIVSWNCMIAGC---------------------------------IDNDRIDDAFDYFQ 136
+++ S+N +IAG + + + DA F
Sbjct: 77 RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
MPERN TY ++ GFL GR+ EA +LF++MP ++V++ TAML G+ + G + +ARAL
Sbjct: 137 QMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARAL 196
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY---------------------- 234
D M +NVVSWT MI+GY +N + AR+LF MPD
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAE 256
Query: 235 -------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
D V AM+ GF + GM++ A+ +FER+ +D +++AMI Y QN E
Sbjct: 257 DLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLME 316
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL F M+ ++P+ + +S+ T C+AL + GR+ H ++R F+ +V +A+IT
Sbjct: 317 ALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALIT 376
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY +CG + ++ F ++V WN++I +AQHG E+AL F + L PDGIT
Sbjct: 377 MYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGIT 436
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
++ +L+AC + GKV E ++F M I + HY+C+VD+L RAG +++A + M
Sbjct: 437 YIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNM 496
Query: 468 PFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVT 527
P E D +WG+L+ AC ++ N E+ E+AAKK+ EL+P ++ YV+LS++Y + G W D +
Sbjct: 497 PVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDAS 556
Query: 528 RVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD-MSHP 564
+R + + + K SWIE VH F GD +SHP
Sbjct: 557 DMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHP 594
>gi|125548358|gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/558 (34%), Positives = 327/558 (58%), Gaps = 37/558 (6%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
A ++ +R G+++ AR+LF+++ ++V++WNA+++GY +NG ++ ++ LF MP ++ VS
Sbjct: 101 ALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVS 160
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPE-------------------------------RNT 143
W MI+G I + +A + F +MP RN
Sbjct: 161 WLTMISGYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNP 220
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
++N MI+G+ + G + A RLF++MP ++V+S TA++ G+++ G VD A + M +
Sbjct: 221 VSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHR 280
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+ V+W M+ G+V+N+R +A +LF MPD D+ + A++ G+ + G +++A + F R
Sbjct: 281 DTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISW--HAILQGYVQQGDMDSANVWFPR 338
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
KD +S+N +I+GY G AL L S MI+ ++PD ATL V + C++L L G
Sbjct: 339 APNKDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCG 394
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+ H+ I+ GFE + V +++I+MYS+CG I ++ F I + V+WN +IA +A H
Sbjct: 395 KMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYH 454
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G ++AL F M GF PD TFLS+LSAC H G + E F M + + ++P S+H
Sbjct: 455 GLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDH 514
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y+C+VD+L R+G + +A+ T+ +P + T W +L +AC + ++LGE+ A+ + +
Sbjct: 515 YSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAWETLFSACNSHGEIQLGEIIARNVLKAR 574
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P + +Y +LSN+YAA MW VR MKE+G+ K+ SWIE+ +V F D +H
Sbjct: 575 PSDGGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSNH 634
Query: 564 PCIDKIHLELKRASVQMK 581
P I++I E+ SV ++
Sbjct: 635 PLIEQICQEVDSISVMIE 652
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 218/429 (50%), Gaps = 39/429 (9%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV N I +++ G + ++ +F M +N+ +WNCM++G I N + +A F AMP
Sbjct: 33 DVFQSNTAINEHFRAGRVAAARRVFDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAMP 92
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
RN+ ++ A+++G+ + GR+ EA LF ++P RNV+S+ AM+ G+ + G V +AR L D
Sbjct: 93 VRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDM 152
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M +++ VSW MI+GY+K + EARELF MP + V A+++G+ ++G + A +
Sbjct: 153 MPWRDDVSWLTMISGYIKRKHVREARELFDSMPSPPTS--VCNALLSGYVELGYMRAAEV 210
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV------SVFTA 313
LF ++Q ++ VS+N MI GYA+ G A RLF M + D+ A + SV A
Sbjct: 211 LFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAA 270
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSV-----------------CNAVITMYSRCGGIL 356
+ + + +GF N + +A++ Y + G +
Sbjct: 271 WKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWHAILQGYVQQGDMD 330
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ + F + + + +SWNT+I+ + G AL S+M G PD T ++S C
Sbjct: 331 SANVWFPRAPNKDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQATLSVVISICA 386
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEH----YTCLVDILSRAGQLEKAWQITQGMPFEAD 472
+ MV ++ I EH + L+ + S+ G + +A Q+ + + + D
Sbjct: 387 SLVSLGCGK-----MVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFE-LILQRD 440
Query: 473 TGVWGSLLA 481
T W +++A
Sbjct: 441 TVTWNAMIA 449
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 195/377 (51%), Gaps = 47/377 (12%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V NA +S G + AA LF QM T++ ++WN +ITGY + G + ++ LF MP K+
Sbjct: 191 VCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPEKD 250
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
++S ++ G + N +D A+ F+ MP R+T +N M+ GF+++ RL++A +LF +MP
Sbjct: 251 VLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPD 310
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR- 230
R+ IS+ A+L G++++G++D A K+ +SW +I+GY E+
Sbjct: 311 RDQISWHAILQGYVQQGDMDSANVWFPRAPNKDAISWNTLISGYKDEGALSLLSEMIRGG 370
Query: 231 -MPD-------------------------------YDKNVFVVTAMITGFCKVGMLENAR 258
PD ++ + V++++I+ + K G++ A
Sbjct: 371 LKPDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEAS 430
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+FE I +D V++NAMIA YA +G+A+EAL++F M K +PD AT +S+ +AC+
Sbjct: 431 QVFELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKG 490
Query: 319 LLNEG-------RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN-L 370
L EG ++ LV R+ + ++ + R G I + R+I S +
Sbjct: 491 YLYEGCYHFRSMQEDWNLVPRSDHYS------CMVDLLGRSGFIHQAYDFTRRIPSDHRT 544
Query: 371 VSWNTIIAAFAQHGHYE 387
+W T+ +A HG +
Sbjct: 545 TAWETLFSACNSHGEIQ 561
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 307/505 (60%), Gaps = 3/505 (0%)
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN-DRIDDAFDYFQ 136
+ +VI+ N +IT + ++G L + +F+SM VK V+WN M+AG + +I A F
Sbjct: 2 SSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFD 61
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
+PE + +YN M++ +L + +E A F+QMP ++ S+ M+ GF + G +D+AR L
Sbjct: 62 RIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQAREL 121
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
M +N VSW MI+GYV++ A++LF P ++V TAMITGF K G +E
Sbjct: 122 FLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPV--RSVVAWTAMITGFMKFGKIEL 179
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A FE + K+ V++NAMIAGY +N AE L+LF M++ +P+ ++L SV CS
Sbjct: 180 AEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSN 239
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L G+Q H L+ ++ N++ ++++MY +CG + D+ F + ++V+WN +
Sbjct: 240 LSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAM 299
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I+ +AQHG EKAL F +M G PD ITF+++LSAC HAG V+ ++ F MV+ YG
Sbjct: 300 ISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYG 359
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
+ +HYTC+VD+L R G+L +A + + MPF+ + ++G+LL AC I+ N+EL E AA
Sbjct: 360 VEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAA 419
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
K + LDP+++A YV L+N+YAA W V VR MK+ V K YSWIE+ + VH F
Sbjct: 420 KNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEF 479
Query: 557 LGGDMSHPCIDKIHLELKRASVQMK 581
GD HP + IH +L +M+
Sbjct: 480 RSGDRIHPELAFIHEKLNELERKMR 504
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 216/409 (52%), Gaps = 45/409 (11%)
Query: 39 NCLIRLFSTQYVFVN---NAKISALS-RAGKISAARQLFDQMTTKDVITWNAIITGYWQN 94
N +R+F + V N+ ++ S R GKI ARQLFD++ D+ ++N ++ Y N
Sbjct: 22 NSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPEPDIFSYNIMLACYLHN 81
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL 154
++ ++ F MPVK+ SWN MI+G N +D A + F MP RN+ ++NAMISG++
Sbjct: 82 ADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYV 141
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
+ G L+ A +LFE P R+V+++TAM+ GFMK G+++ A + M KN+V+W MI G
Sbjct: 142 ESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAG 201
Query: 215 YVKNERFCEARELFYRM------PDYDK-------------------------------N 237
Y++N + +LF RM P+ N
Sbjct: 202 YIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWN 261
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ T++++ +CK G LE+A LF + KD V++NAMI+GYAQ+G E+AL LF M
Sbjct: 262 ITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRD 321
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGIL 356
M+PD T V+V +AC+ ++ G + ++R+ G EA V+ + R G ++
Sbjct: 322 EGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLV 381
Query: 357 DS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ +L + P+ + T++ A H + E L F+ L DP+
Sbjct: 382 EAVDLIKKMPFKPHSAIFGTLLGACRIHKNLE--LAEFAAKNLLNLDPE 428
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 325/558 (58%), Gaps = 37/558 (6%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
A ++ +R G+++ AR+LF+++ ++V++WNA+++GY +NG ++ ++ LF MP ++ VS
Sbjct: 101 ALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVS 160
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPE-------------------------------RNT 143
W MI+G I + +A + F +MP RN
Sbjct: 161 WLTMISGYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNP 220
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
++N MI+G+ + G + A RLF++MP ++V+S TA++ G+++ G VD A + M +
Sbjct: 221 VSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHR 280
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+ V+W M+ G+V+N+R +A +LF MPD D+ + A++ G+ + G +++A F R
Sbjct: 281 DTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISW--NAILQGYVQQGDMDSANAWFRR 338
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
KD +S+N +I+GY G AL L S MI+ ++PD ATL V + C++L L G
Sbjct: 339 APNKDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCG 394
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+ H+ I+ GFE + V +++I+MYS+CG I ++ F I + V+WN +IA +A H
Sbjct: 395 KMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYH 454
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G ++AL F M GF PD TFLS+LSAC H G + E F M + + ++P S+H
Sbjct: 455 GLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDH 514
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y+C+VD+L R+G + +A+ T+ +P + T W +L + C + ++LGE+ A+ + +
Sbjct: 515 YSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAWETLFSVCNSHGEIQLGEIIARNVLKAR 574
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P + +Y +LSN+YAA MW VR MKE+G+ K+ SWIE+ +V F D +H
Sbjct: 575 PSDGGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSNH 634
Query: 564 PCIDKIHLELKRASVQMK 581
P I++I E+ SV ++
Sbjct: 635 PLIEQICQEVDSISVMIE 652
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAK-----ISALSRAGKISAARQLFDQMTTKDVITW 84
C + ++ L++ + F ++A IS S+ G IS A Q+F+ + +D +TW
Sbjct: 385 CASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTW 444
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPE 140
NA+I Y +G E+ +F M ++ +++ C + + +F++M E
Sbjct: 445 NAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQE 504
Query: 141 R-----NTATYNAMISGFLKHGRLEEATRLFEQMP 170
+ Y+ M+ + G + +A ++P
Sbjct: 505 DWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIP 539
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/503 (39%), Positives = 299/503 (59%), Gaps = 21/503 (4%)
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG-CIDNDRIDDAFDYFQAMP 139
+ N II ++G + + ++F M KN VSWN ++ G D R+ +A F +P
Sbjct: 61 IFPLNKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVGISKDPSRMMEAHQLFDEIP 120
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E +T +YN M+S ++++G E+A F +MP ++ S+ M+ G+ ++GE++KAR L
Sbjct: 121 EPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFKDAASWNTMITGYARRGEMEKARVLFYS 180
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M KN VSW MI+GY++ +A F P + V TAMITG+ K +E A
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKAAHFFKAAPF--RGVVAWTAMITGYMKAKKVELAEA 238
Query: 260 LFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F+ + K+ V++NAMI+GY +N E+ L+LF M++ ++P+ + L S CS L
Sbjct: 239 MFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L GRQ H +V MY +CG + D+ F + ++V+WN +I+
Sbjct: 299 ALCLGRQIHQIV-----------------MYCKCGELGDAWKLFEAMKKKDVVAWNAMIS 341
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+AQHG+ EKAL F +M + PD ITF+++L AC HAG V+ M F+ MV+ Y +
Sbjct: 342 GYAQHGNAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVE 401
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
P +HYTC+VD+L RAG++E+A ++ + MPF V+G+LL AC ++ NVEL E AA+K
Sbjct: 402 PRPDHYTCMVDLLGRAGKVEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 461
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ ELDP+N+A YV L+N+YA+ +W DV RVR MKE V K YSWIEI NK+H+F
Sbjct: 462 LLELDPRNAAGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGYSWIEIRNKIHHFRS 521
Query: 559 GDMSHPCIDKIHLELKRASVQMK 581
D HP +D IH +LK +MK
Sbjct: 522 SDRIHPELDSIHKKLKELERKMK 544
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 194/365 (53%), Gaps = 31/365 (8%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
++ A QLFD++ D ++N +++ Y +NG +++++ F MP K+ SWN MI G
Sbjct: 108 RMMEAHQLFDEIPEPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFKDAASWNTMITGYAR 167
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
++ A F +M E+N ++NAMISG+++ G LE+A F+ P R V+++TAM+ G+
Sbjct: 168 RGEMEKARVLFYSMMEKNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGY 227
Query: 185 MKKGEVDKARALSDYMSF-KNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVV 241
MK +V+ A A+ M+ KN+V+W MI+GYV+N R + +LF M + N +
Sbjct: 228 MKAKKVELAEAMFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGL 287
Query: 242 TAMITG------------------FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
++ + G +CK G L +A LFE ++ KD V++NAMI+GYAQ+G
Sbjct: 288 SSALLGCSELSALCLGRQIHQIVMYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQHG 347
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVC 342
AE+AL LF M +PD T V+V AC+ L++ G ++R+ E
Sbjct: 348 NAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPDHY 407
Query: 343 NAVITMYSRCGGILDSELAFRQIHS----PNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
++ + R G + E A + I S P+ + T++ A H + E L F+ L
Sbjct: 408 TCMVDLLGRAGKV---EEALKLIRSMPFRPHAAVFGTLLGACRVHKNVE--LAEFAAEKL 462
Query: 399 NGFDP 403
DP
Sbjct: 463 LELDP 467
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/492 (39%), Positives = 299/492 (60%), Gaps = 4/492 (0%)
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG-CIDNDRIDDAFDYFQAMP 139
+ N II ++G + + +F M KN ++WN ++ G D R+ +A F +P
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E +T +YN M+S ++++ E+A F++MP ++ S+ M+ G+ ++GE++KAR L
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M KN VSW MI+GY++ +A F P + V TAMITG+ K +E A
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPV--RGVVAWTAMITGYMKAKKVELAEA 238
Query: 260 LFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F+ + K+ V++NAMI+GY +N E+ L+LF M++ ++P+ + L S CS L
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L GRQ H +V ++ +V+ ++I+MY +CG + D+ F + ++V+WN +I+
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+AQHG+ +KAL F +M N PD ITF+++L AC HAG VN M FE MV+ Y +
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
P +HYTC+VD+L RAG+LE+A ++ + MPF V+G+LL AC ++ NVEL E AA+K
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 478
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ +L+ QN+A YV L+N+YA+ W DV RVR MKE V K YSWIEI NKVH+F
Sbjct: 479 LLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRS 538
Query: 559 GDMSHPCIDKIH 570
D HP +D IH
Sbjct: 539 SDRIHPELDSIH 550
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/632 (34%), Positives = 340/632 (53%), Gaps = 88/632 (13%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
FS + +F+ N I A S+ G + RQ+FD+M +++ TWN+++TG + GFL E+ +LF
Sbjct: 51 FSNE-IFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLF 109
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATY-------------- 146
+SMP ++ +WN M++G +DR ++A YF M + N ++
Sbjct: 110 RSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMN 169
Query: 147 ---------------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
+A++ + K G + +A R+F++M RNV+S+ +++ F
Sbjct: 170 KGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFE 229
Query: 186 KKGEVDKA----------RALSDYMSFKNVVSWTVMITG--------------------- 214
+ G +A R D ++ +V+S ++
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 215 ---------YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
Y K R EAR +F MP +NV T+MI+G+ + ARL+F ++
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPI--RNVIAETSMISGYAMAASTKAARLMFTKMA 347
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
++ VS+NA+IAGY QNG EEAL LF + + + P + ++ AC+ L L+ G Q
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQ 407
Query: 326 SHVLVIRNGF------EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
+HV V+++GF E ++ V N++I MY +CG + + L FR++ + VSWN +I
Sbjct: 408 AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIG 467
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
FAQ+G+ +AL F +M +G PD IT + +LSACGHAG V E F M + +G+ P
Sbjct: 468 FAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAP 527
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HYTC+VD+L RAG LE+A + + MP + D+ +WGSLLAAC ++ N+ LG+ A+K+
Sbjct: 528 LRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKL 587
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
E++P NS YV+LSN+YA G W DV VR M+++GVTKQ SWI+I H F+
Sbjct: 588 LEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVK 647
Query: 560 DMSHPCIDKIHLELKRASVQMKSVDDFVEIAT 591
D SHP +IH L +M+ D EI +
Sbjct: 648 DKSHPRKKQIHSLLDILIAEMRPEQDHTEIGS 679
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF-----RQIHSPNLV------- 371
R H VI++GF + + N +I YS+CG + D F R I++ N V
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 372 -------------------SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
+WN++++ FAQH E+AL +F+ M GF + +F S+L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHY--TCLVDILSRAGQLEKAWQITQGMPFE 470
SAC +N+ + + L+ K + S+ Y + LVD+ S+ G + A ++ M +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFL---SDVYIGSALVDMYSKCGNVNDAQRVFDEMG-D 215
Query: 471 ADTGVWGSLL 480
+ W SL+
Sbjct: 216 RNVVSWNSLI 225
>gi|68611229|emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/546 (34%), Positives = 319/546 (58%), Gaps = 37/546 (6%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
A ++ +R G+++ AR+LF+++ ++V++WNA+++GY +NG ++ ++ LF MP ++ VS
Sbjct: 101 ALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVS 160
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPE-------------------------------RNT 143
W MI+G I + +A + F +MP RN
Sbjct: 161 WLTMISGYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNP 220
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
++N MI+G+ + G + A RLF++MP ++V+S TA++ G+++ G VD A + M +
Sbjct: 221 VSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHR 280
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+ V+W M+ G+V+N+R +A +LF MPD D+ + A++ G+ + G +++A F R
Sbjct: 281 DTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISW--NAILQGYVQQGDMDSANAWFRR 338
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
KD +S+N +I+GY G AL L S MI+ ++PD ATL V + C++L L G
Sbjct: 339 APNKDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCG 394
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+ H+ I+ GFE + V +++I+MYS+CG I ++ F I + V+WN +IA +A H
Sbjct: 395 KMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYH 454
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G ++AL F M GF PD TFLS+LSAC H G + E F M + + ++P S+H
Sbjct: 455 GLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDH 514
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y+C+VD+L R+G + +A+ T+ +P + T W +L + C + ++LGE+ A+ + +
Sbjct: 515 YSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAWETLFSVCNSHGEIQLGEIIARNVLKAR 574
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P + +Y +LSN+YAA MW VR MKE+G+ K+ SWIE+ +V F D +H
Sbjct: 575 PSDGGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSNH 634
Query: 564 PCIDKI 569
P I++I
Sbjct: 635 PLIEQI 640
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAK-----ISALSRAGKISAARQLFDQMTTKDVITW 84
C + ++ L++ + F ++A IS S+ G IS A Q+F+ + +D +TW
Sbjct: 385 CASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTW 444
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPE 140
NA+I Y +G E+ +F M ++ +++ C + + +F++M E
Sbjct: 445 NAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQE 504
Query: 141 R-----NTATYNAMISGFLKHGRLEEATRLFEQMP 170
+ Y+ M+ + G + +A ++P
Sbjct: 505 DWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIP 539
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 319/535 (59%), Gaps = 7/535 (1%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
+S +R+G +S A+ +FD+M + +W A+++ + +G +E+K LF +M +++++W
Sbjct: 30 LSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLIAWT 89
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
M+ I+DA +F MPER+ + AM++ + G++E A F+QMP RN+ S
Sbjct: 90 IMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARETFDQMPERNLFS 149
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+T++L + + G+V A + D M N+V+WT M+TGY + A+ F MP+ D
Sbjct: 150 WTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERD- 208
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM- 295
+ TAM++ + G L R +F+R+ +D +S+ M+A +N + EE+ LF M
Sbjct: 209 -LIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMP 267
Query: 296 ----IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+ M P+ T +++ ACS L L EGR+ H V GF+ ++ V NA++ Y R
Sbjct: 268 RHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGR 327
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG + D+++ F + +++SW+++I+AFAQ G ++A+ + +M G PD I F+S+
Sbjct: 328 CGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISV 387
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L AC ++G V S D F +V + P+ EHY C+VD+L RAG+L A + + MPF
Sbjct: 388 LFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHP 447
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
++ ++L+AC + +VE GE AA+ + ELDP+NS+ Y+ L+N+Y+AA +D R+R
Sbjct: 448 GPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRK 507
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDF 586
LM+E+G+ K+ SWIE+ ++VH F+ GD HP D+I+ E++R QMK F
Sbjct: 508 LMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYF 562
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 154/319 (48%), Gaps = 26/319 (8%)
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
F + G +E A ++F+ + R+ S+ ML + + G++ A+ + D M ++ SWT ++
Sbjct: 2 FGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALL 61
Query: 213 TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ + + EA+ LF M + D + T M+T +E+A+ F+++ +D V++
Sbjct: 62 SAFALSGHHEEAKTLFDTMQERD--LIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAW 119
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
AM+A A+ G E A F M + ++ F+ S L GR V
Sbjct: 120 TAMLAANAERGQMENARETFDQMPERNL----------FSWTSLLSAY--GRSGDVKAAG 167
Query: 333 NGFEA----NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
F++ N+ A++T YS G ++ ++ AF + +L++W +++A+A +GH
Sbjct: 168 RVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRY 227
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK----VYGIIPSSEHY 444
F +M + D I++ ++++A + ES +LF+ M + G+ P+ +
Sbjct: 228 TREIFQRMP----ERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTF 283
Query: 445 TCLVDILSRAGQLEKAWQI 463
L+D S G L + +I
Sbjct: 284 ITLLDACSFLGALAEGRKI 302
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
R F T V V+NA ++ R G + A+ +FD M +DVI+W+++I+ + Q G + E+
Sbjct: 309 RGFDTDLV-VSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAME 367
Query: 103 LFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-----PERNTATYNAMISGF 153
L+ M + + + + ++ C ++ ++ + D+F+++ E Y M+
Sbjct: 368 LYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVL 427
Query: 154 LKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSD 198
+ G+L +A L MP + Y ML +V++ A ++
Sbjct: 428 GRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAE 473
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/617 (32%), Positives = 332/617 (53%), Gaps = 77/617 (12%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR + F+ N I+ + G + AR +FD + ++ +WN +++ Y + G+LQ+
Sbjct: 31 IIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDM 90
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMI----- 150
+ +F SMP ++VSWN +++G N I ++ + M + N T++ M+
Sbjct: 91 QRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSN 150
Query: 151 SGFLKHGR------------------------------LEEATRLFEQMPRRNVISYTAM 180
GF+ GR + +A R+FE++P +N++ Y M
Sbjct: 151 RGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTM 210
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--------- 231
+ G ++ + +A L D M K+ +SWT +ITG +N F EA + F M
Sbjct: 211 ITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQ 270
Query: 232 ----------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
DY N+FV +A++ +CK ++ A +F +
Sbjct: 271 FTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRK 330
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++ K+ +S+ AM+ GY QNG +EEA+R+F M + ++ PDD TL SV ++C+ L L EG
Sbjct: 331 MRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEG 390
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
Q H + +G V+V NA+IT+Y +CG + + F ++ + VSW +++ +AQ
Sbjct: 391 AQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQF 450
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G + + F M +G PDG+TF+ +LSAC AG V + FE MVK + I P +H
Sbjct: 451 GKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDH 510
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
YTC++D+LSRAG+LE+A MPF D W +LL++C +N N+E+G+ AA+ + +L+
Sbjct: 511 YTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLE 570
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
PQN A Y++LS++YAA G W DV ++R M+E GV K+ +SWI+ NKVH F D S
Sbjct: 571 PQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSS 630
Query: 564 PCIDKIHLELKRASVQM 580
P D+I+ +L+ ++M
Sbjct: 631 PFSDQIYAKLESLYLKM 647
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 136/303 (44%), Gaps = 65/303 (21%)
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
R+ + Y +++ + K G++ AR + D++ N+ SW +++ Y K
Sbjct: 30 RIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSK------ 83
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
+G L++ + +F+ + D VS+N++++GYA NG
Sbjct: 84 ---------------------------LGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNG 116
Query: 284 VAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
+ E++R+++ M+K + + T ++ S ++ GRQ H + + G+++ + V
Sbjct: 117 LISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVG 176
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLV------------------------------- 371
+ ++ MY++ G I D+ F +I N+V
Sbjct: 177 SPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSI 236
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SW TII Q+G +++A+ F +MG+ GF D TF S+L+ACG ++E + +
Sbjct: 237 SWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYI 296
Query: 432 VKV 434
++
Sbjct: 297 IRT 299
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
++ H +IR + N +I Y + G + ++ F I PNL SWNT+++A+++
Sbjct: 25 KKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKL 84
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
G+ + F M + D +++ SLLS G ++ES+ ++ +M+K
Sbjct: 85 GYLQDMQRVFDSMP----NHDVVSWNSLLSGYAGNGLISESVRVYNMMLK 130
>gi|413935435|gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays]
Length = 658
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/588 (34%), Positives = 318/588 (54%), Gaps = 61/588 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF N +S L+R G ++ AR +FD M +++ ++W A++TGY + G + E+++LF MP
Sbjct: 67 VFTWNCMVSGLARNGLLADARGVFDAMPSRNSVSWAALLTGYARRGRVAEARDLFDRMPH 126
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN--------------------------- 142
+N+VSWN M++G + N +D A + F AMP R+
Sbjct: 127 RNVVSWNAMVSGYLRNGMVDRARELFDAMPARDDVSWLMMVSGYMRRKRFREAREIFDRA 186
Query: 143 -----TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
T+ NA++SG+ +G L++A LF +M R + +S+ AM+ G+ + G + AR L
Sbjct: 187 PSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQRPDRVSWNAMITGYTRAGMMQVARRLF 246
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENA 257
D M K+ VSWT ++ GY++N A E+F MPD D V M+ GF L++A
Sbjct: 247 DEMPGKDTVSWTAIVRGYLQNGDVDAAWEVFQDMPDRD--VLAWNTMMGGFVVSDRLDDA 304
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNG---------------------------VAEEALR 290
LF + +D VS+N ++ GY Q G E AL
Sbjct: 305 LRLFADMPDRDLVSWNTILQGYIQQGDMDSATTWFRSMLEKDETSWNTVISGYKDEGALS 364
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
L S M + +PD AT V + C++L L GR H+ I+ GFE + V +++I+MYS
Sbjct: 365 LLSEMTRGGYRPDQATWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYS 424
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG I ++ F I + V+WN +IA +A HG +AL F +M + F PD TFLS
Sbjct: 425 KCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEALALFDRMTKDRFSPDHATFLS 484
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+LSAC H G + E F M + + ++P S+HY+C+VD+L R+G + +A+ T+ +P
Sbjct: 485 VLSACAHKGYLYEGCHYFRSMQQDWNLVPRSDHYSCMVDLLGRSGFVHQAYNFTRKIPSN 544
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
W +L ++C + +++LGEL AK + + P + +Y +LSN+YAA GMW VR
Sbjct: 545 LQINAWETLFSSCNAHGDIQLGELVAKNVLQSRPSDGGMYTLLSNIYAAKGMWSSAATVR 604
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASV 578
LMKEQG+ K+ SWIE+ V F D +HP I++I E+ S+
Sbjct: 605 GLMKEQGLKKETGCSWIELKGDVVSFSSNDNAHPLIEQICQEVDNLSI 652
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 225/433 (51%), Gaps = 25/433 (5%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N+ I A RAG++ AAR++FD+M ++V TWN +++G +NG L +++ +F +MP +N V
Sbjct: 40 NSDIMAHFRAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFDAMPSRNSV 99
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SW ++ G R+ +A D F MP RN ++NAM+SG+L++G ++ A LF+ MP R+
Sbjct: 100 SWAALLTGYARRGRVAEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDRARELFDAMPARD 159
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS-WTVMITGYVKNERFCEARELFYRMP 232
+S+ M+ G+M++ +AR + D S +++GY +A ELF RM
Sbjct: 160 DVSWLMMVSGYMRRKRFREAREIFDRAPSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQ 219
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
D+ + AMITG+ + GM++ AR LF+ + KD VS+ A++ GY QNG + A +F
Sbjct: 220 RPDRVSW--NAMITGYTRAGMMQVARRLFDEMPGKDTVSWTAIVRGYLQNGDVDAAWEVF 277
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M D+ + T++ F L + + + + ++ N ++ Y +
Sbjct: 278 QDMPDRDVLAWN-TMMGGFVVSDRL-------DDALRLFADMPDRDLVSWNTILQGYIQQ 329
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + + FR + + SWNT+I+ + G AL S+M G+ PD T+ ++
Sbjct: 330 GDMDSATTWFRSMLEKDETSWNTVISGYKDEG----ALSLLSEMTRGGYRPDQATWSVVI 385
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEH----YTCLVDILSRAGQLEKAWQITQGMP 468
S C + MV + I EH + L+ + S+ G + +A Q+ +
Sbjct: 386 SVCASLAALGCGR-----MVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQVFD-LI 439
Query: 469 FEADTGVWGSLLA 481
+ DT W +++A
Sbjct: 440 VQRDTVTWNAMIA 452
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 123/295 (41%), Gaps = 62/295 (21%)
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
R P + +V + I + G + AR +F+ ++ ++ ++N M++G A+NG+ +A
Sbjct: 28 RAPRHAGDVGRWNSDIMAHFRAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADAR 87
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE----ANVSVCNAV 345
+F M + + A L R+ V R+ F+ NV NA+
Sbjct: 88 GVFDAMPSRN------------SVSWAALLTGYARRGRVAEARDLFDRMPHRNVVSWNAM 135
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSW-------------------------------- 373
++ Y R G + + F + + + VSW
Sbjct: 136 VSGYLRNGMVDRARELFDAMPARDDVSWLMMVSGYMRRKRFREAREIFDRAPSPPPTSVC 195
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N +++ +A +G+ + A F +M PD +++ ++++ AG + + LF+ M
Sbjct: 196 NALLSGYAGYGYLKDAEELFGRMQ----RPDRVSWNAMITGYTRAGMMQVARRLFDEM-- 249
Query: 434 VYGIIPSSE--HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
P + +T +V + G ++ AW++ Q MP + D W +++ V++
Sbjct: 250 -----PGKDTVSWTAIVRGYLQNGDVDAAWEVFQDMP-DRDVLAWNTMMGGFVVS 298
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C I+ V ++ IS S+ G I+ A Q+FD + +D +TWNA+I Y +G E
Sbjct: 403 CTIKTGFEHDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAE 462
Query: 100 SKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMI 150
+ LF M ++ +++ C + + YF++M + + Y+ M+
Sbjct: 463 ALALFDRMTKDRFSPDHATFLSVLSACAHKGYLYEGCHYFRSMQQDWNLVPRSDHYSCMV 522
Query: 151 SGFLKHGRLEEATRLFEQMP 170
+ G + +A ++P
Sbjct: 523 DLLGRSGFVHQAYNFTRKIP 542
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/465 (40%), Positives = 289/465 (62%), Gaps = 9/465 (1%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
MI+G + N + D A D F MPER+ ++N M++G++++ L+ A LFE+MP R+++S+
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
AML G+ + G VD+AR + M KN +SW ++ YV+N R +A+ LF D+
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDW--- 117
Query: 238 VFVVTAMITGFCKVG-MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+++ C +G + R LF+ + +D +S++AMIAGY+QNG +EEAL F M
Sbjct: 118 -----TLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQ 172
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ + + ++ + CS + L GRQ H +++ G++ V NA++ MY +CG I
Sbjct: 173 RDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSID 232
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
++ AF++I ++VSWNT+I +A+HG E+AL F M G PD T +S+L+AC
Sbjct: 233 EARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACS 292
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
HAG V++ + F M + YGI HYTC+VD+L RAGQLE+A + + MPFE D W
Sbjct: 293 HAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATW 352
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
G+LL A I+ N ELGE AA+ + E++P NS +Y++LS LYAA+G W D ++RL M+ +
Sbjct: 353 GALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNK 412
Query: 537 GVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
GV K YSW+E+ NK+H F GD SHP DKI+ L+ +++K
Sbjct: 413 GVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLK 457
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 197/370 (53%), Gaps = 44/370 (11%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
IS R K AR LFD+M +D+ +WN ++TGY +N L+ ++ LF+ MP ++IVSWN
Sbjct: 2 ISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWN 61
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
M++G N +D+A + F MP +N ++N +++ ++++GR+E+A RLFE ++S
Sbjct: 62 AMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVS 121
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN-------------ERFCE 223
+ ++ GF++ K R L D M ++ +SW+ MI GY +N +R CE
Sbjct: 122 WNCLMGGFVR-----KRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCE 176
Query: 224 ----------------------ARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARL 259
R+L R+ Y +V A++ +CK G ++ AR
Sbjct: 177 RLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARD 236
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
F+ I KD VS+N MI GYA++G EEAL +F M ++PDDAT+VSV ACS L
Sbjct: 237 AFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGL 296
Query: 320 LNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTII 377
+++G + + R+ G A + ++ + R G + +++ + + P+ +W ++
Sbjct: 297 VDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALL 356
Query: 378 AAFAQHGHYE 387
A HG+ E
Sbjct: 357 GASRIHGNTE 366
>gi|125550574|gb|EAY96283.1| hypothetical protein OsI_18181 [Oryza sativa Indica Group]
Length = 661
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 308/534 (57%), Gaps = 7/534 (1%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ ++ + +AG++ AR+LFD M K+V+ W +++GY + G + E++ LF MP
Sbjct: 123 IHLDTVMLDGYVKAGQVDRARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLMPY 182
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+N+ SW M+ G N + +A + F MPERN + M+ ++ +G ++EA LF +M
Sbjct: 183 RNVFSWTTMVQGYAHNGMLREAREMFDKMPERNVVAWTVMVKAYVDNGCIQEALELFNRM 242
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P+ N S+ AM G M G+VD A L D M KNVVSWT+M+TG +N ARE F
Sbjct: 243 PQMNSYSWNAMATGLMSAGKVDDAVQLFDKMPHKNVVSWTIMVTGLAQNGFVSRAREFFD 302
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
RMP K++ +MIT + G + +A+ LF+ + K+ V++N +I GY+ N + +EAL
Sbjct: 303 RMP--KKDIPAWNSMITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEAL 360
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
RLF M++ + PD TL+SV + E RQ H L + G++ ++ N +++MY
Sbjct: 361 RLFLLMLRSAVSPDSTTLISVLVVSESTM---EVRQIHGLSTKLGYQPETNLGNTLVSMY 417
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
SR G + + LAFR+++ + ++W ++I A A HG AL F+QM G+ P TF
Sbjct: 418 SRSGDLSSAWLAFRRLNEKDAITWTSMIQALANHGCAPCALQGFAQMLRCGYKPSSTTFT 477
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
++LSAC H G V + +F+ + VYG+ P+ EHY+CLVD+L RAG + +A ++ GM
Sbjct: 478 AVLSACNHVGLVEKGRKIFKSISHVYGLEPTIEHYSCLVDLLGRAGYVREAKEVVDGMQR 537
Query: 470 E-ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTR 528
+ D + G+LL +C+ + VE+G + + ++DP S Y +L+N++A+ GMW +V
Sbjct: 538 DMCDEAILGTLLGSCMTHNEVEVGRAVGEDLVKIDPSGSGGYTLLANVFASGGMWNEVAS 597
Query: 529 VRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL-KRASVQMK 581
V +MK V K +S IE+ + H F D H +I+ L R QMK
Sbjct: 598 VWKIMKGSKVKKTPGFSQIEVNARNHVFYSRDQMHSQRTEIYEMLNSRLVPQMK 651
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 154/338 (45%), Gaps = 56/338 (16%)
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+ V++ M+ ++ + A L+ P + + + T M+ G+ K G ++ AR LF+
Sbjct: 89 DAVAYAAMVGIHLWDRDLPHAEALYRAAPPDCRGIHLDTVMLDGYVKAGQVDRARRLFDG 148
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ K+ V++ M++GY + G+ +EA RLF D+ P
Sbjct: 149 MAVKNVVAWTCMVSGYCRAGLVDEARRLF------DLMP--------------------- 181
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
RN F ++ Y+ G + ++ F ++ N+V+W ++ A+ +
Sbjct: 182 -------YRNVFS-----WTTMVQGYAHNGMLREAREMFDKMPERNVVAWTVMVKAYVDN 229
Query: 384 GHYEKALIFFSQMG-LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G ++AL F++M +N + ++ ++ + AGKV++++ LF+ M +
Sbjct: 230 GCIQEALELFNRMPQMNSY-----SWNAMATGLMSAGKVDDAVQLFDKMPHKNVV----- 279
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
+T +V L++ G + +A + MP + D W S++ A + V A+++ ++
Sbjct: 280 SWTIMVTGLAQNGFVSRAREFFDRMP-KKDIPAWNSMITAYTNDGQVN----DAQRLFDI 334
Query: 503 DP-QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
P +N + ++ + Y+ + + R+ LLM V+
Sbjct: 335 MPSKNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAVS 372
>gi|115461705|ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group]
gi|45680436|gb|AAS75237.1| unknown protein [Oryza sativa Japonica Group]
gi|113578003|dbj|BAF16366.1| Os05g0112900 [Oryza sativa Japonica Group]
gi|215715346|dbj|BAG95097.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736909|dbj|BAG95838.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629956|gb|EEE62088.1| hypothetical protein OsJ_16872 [Oryza sativa Japonica Group]
Length = 661
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 308/534 (57%), Gaps = 7/534 (1%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ ++ + +AG++ AR+LFD M K+V+ W +++GY + G + E++ LF MP
Sbjct: 123 IHLDTVMLDGYVKAGQVDRARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLMPY 182
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+N+ SW M+ G N + +A + F MPERN + M+ ++ +G ++EA LF +M
Sbjct: 183 RNVFSWTTMVQGYAHNGMLREAREMFDKMPERNVVAWTVMVKAYVDNGCIQEALELFNRM 242
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P+ N S+ AM G M G+VD A L D M KNVVSWT+M+TG +N ARE F
Sbjct: 243 PQMNSYSWNAMATGLMSAGKVDDAVQLFDKMPHKNVVSWTIMVTGLAQNGFVSRAREFFD 302
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
RMP K++ +MIT + G + +A+ LF+ + K+ V++N +I GY+ N + +EAL
Sbjct: 303 RMP--KKDIPAWNSMITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEAL 360
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
RLF M++ + PD TL+SV + E RQ H L + G++ ++ N +++MY
Sbjct: 361 RLFLLMLRSAVSPDSTTLISVLVVSESTM---EVRQIHGLSTKLGYQPETNLGNTLVSMY 417
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
SR G + + LAFR+++ + ++W ++I A A HG AL F+QM G+ P TF
Sbjct: 418 SRSGDLSSAWLAFRRLNEKDAITWTSMIQALANHGCAPCALQGFAQMLRCGYKPSSTTFT 477
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
++LSAC H G V + +F+ + VYG+ P+ EHY+CLVD+L RAG + +A ++ GM
Sbjct: 478 AVLSACNHVGLVEKGRKIFKSISHVYGLGPTIEHYSCLVDLLGRAGYVREAKEVVDGMQR 537
Query: 470 E-ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTR 528
+ D + G+LL +C+ + VE+G + + ++DP S Y +L+N++A+ GMW +V
Sbjct: 538 DMCDEAILGTLLGSCMTHNEVEVGRAVGEDLVKIDPSGSGGYTLLANVFASGGMWNEVAS 597
Query: 529 VRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL-KRASVQMK 581
V +MK V K +S IE+ + H F D H +I+ L R QMK
Sbjct: 598 VWKIMKGSKVKKTPGFSQIEVNARNHVFYSRDQMHSQRTEIYEMLNSRLVPQMK 651
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 154/338 (45%), Gaps = 56/338 (16%)
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+ V++ M+ ++ + A L+ P + + + T M+ G+ K G ++ AR LF+
Sbjct: 89 DAVAYAAMVGIHLWDRDLPHAEALYRAAPPDCRGIHLDTVMLDGYVKAGQVDRARRLFDG 148
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ K+ V++ M++GY + G+ +EA RLF D+ P
Sbjct: 149 MAVKNVVAWTCMVSGYCRAGLVDEARRLF------DLMP--------------------- 181
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
RN F ++ Y+ G + ++ F ++ N+V+W ++ A+ +
Sbjct: 182 -------YRNVFS-----WTTMVQGYAHNGMLREAREMFDKMPERNVVAWTVMVKAYVDN 229
Query: 384 GHYEKALIFFSQMG-LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G ++AL F++M +N + ++ ++ + AGKV++++ LF+ M +
Sbjct: 230 GCIQEALELFNRMPQMNSY-----SWNAMATGLMSAGKVDDAVQLFDKMPHKNVV----- 279
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
+T +V L++ G + +A + MP + D W S++ A + V A+++ ++
Sbjct: 280 SWTIMVTGLAQNGFVSRAREFFDRMP-KKDIPAWNSMITAYTNDGQVN----DAQRLFDI 334
Query: 503 DP-QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
P +N + ++ + Y+ + + R+ LLM V+
Sbjct: 335 MPSKNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAVS 372
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/581 (36%), Positives = 333/581 (57%), Gaps = 25/581 (4%)
Query: 19 PILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT- 77
PIL I S + F H +++L FV NA I +R G I AR++FD++
Sbjct: 104 PIL-IKSAGNGGIGFHAH----VLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPD 158
Query: 78 -TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
+ V WNA+++GYW+ +++ LF MP +N+++W M+ G ++ A YF
Sbjct: 159 YERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFD 218
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDK 192
MPER+ ++NAM+SG+ ++G EE RLF++M + ++ ++ +G+
Sbjct: 219 CMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCL 278
Query: 193 ARALSDYMSFK----NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGF 248
A +L + K N T ++ Y K AR +F + Y +N AMI+ +
Sbjct: 279 AASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAY-RNSVTWNAMISAY 337
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATL 307
+VG L++AR LF + ++ V++N+MIAGYAQNG + A+ LF MI + PD+ T+
Sbjct: 338 TRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTM 397
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
VSV +AC L L G + N + ++S NA+I MYSRCG + D++ F+++ +
Sbjct: 398 VSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMAT 457
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
++VS+NT+I+ FA HGH +A+ S M G +PD +TF+ +L+AC HAG + E +
Sbjct: 458 RDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKV 517
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
FE + P+ +HY C+VD+L R G+LE A + + MP E GV+GSLL A I+
Sbjct: 518 FESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHK 572
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
VELGELAA K+ EL+P NS +++LSN+YA+AG W+DV R+R MK+ GV K +SW+
Sbjct: 573 QVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWV 632
Query: 548 EIGNKVHYFLGGDMSHPCIDKIH---LELKRASVQMKSVDD 585
E G K+H F+ D SH D I+ +EL++ + + D
Sbjct: 633 EYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIAD 673
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 110/269 (40%), Gaps = 20/269 (7%)
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
LLF + F +M+ Y+ + + +F M ++PD A + + +
Sbjct: 55 LLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPD-AFVYPILIKSAG-- 111
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTI 376
N G H V++ G ++ V NAVI MY+R G I + F +I + + WN +
Sbjct: 112 --NGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
++ + + +A F M + + IT+ ++++ + + F+ M +
Sbjct: 170 VSGYWKWESEGQAQWLFDVMP----ERNVITWTAMVTGYAKVKDLEAARRYFDCMPE--- 222
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGM---PFEADTGVWGSLLAACVINLNVELGE 493
S + ++ ++ G E+ ++ M E D W ++++AC + L
Sbjct: 223 --RSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAA 280
Query: 494 LAAKKMRELDPQ-NSAVYVMLSNLYAAAG 521
+ + + Q N V L ++YA G
Sbjct: 281 SLVRTLHQKQIQLNCFVRTALLDMYAKCG 309
>gi|147861249|emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
Length = 932
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/511 (38%), Positives = 309/511 (60%), Gaps = 11/511 (2%)
Query: 43 RLFST---QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
+LF T + + +A I ++AG + +A+++FD M +V +W ++I+GY+++G + +
Sbjct: 27 KLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAK 86
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+ LF MP KN+VSW M+ G N ID A F MPE+NT ++ AM+ ++ +GR
Sbjct: 87 ACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRT 146
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
+EA +LF +MP+RN+ S+ M+ G + V++A L M +N VSWT+M++G +N
Sbjct: 147 DEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNG 206
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
ARE F +MP +K++ AMIT + ++ A LF + ++ V++NAMI GY
Sbjct: 207 FTKLAREYFDQMP--NKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDGY 264
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC-SALQLLNEGRQSHVLVIRNGFEAN 338
A++ EA++ M++ ++P++ T+ + T+C L+L+ Q+H L I G E
Sbjct: 265 ARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLELM----QAHALAIVVGCECE 320
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
S+ NA+ITMYSR G I S +AF + + ++VSW ++ AF HGH + AL F M
Sbjct: 321 TSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLK 380
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+G PD ITF+ +LSAC HAG V + LF+ M + YG+ P +EHY+CLVDIL RAGQ+
Sbjct: 381 SGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVH 440
Query: 459 KAWQITQGMP-FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
+A + MP E D V G+LL AC ++ NVE+ + +K+ EL P +S YV+L+N++
Sbjct: 441 EAMDVVWKMPECERDGAVLGALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVF 500
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
AA G W + VR MK++ V K +S IE
Sbjct: 501 AARGNWDEFAEVRKKMKDRNVRKVPGFSQIE 531
>gi|357138593|ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 324/558 (58%), Gaps = 37/558 (6%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
A ++ +R G+++ AR+LFD+M ++V++WNA+++GY +NG ++ ++ LF MP +N VS
Sbjct: 110 ALLTGYARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDMMPSRNDVS 169
Query: 115 WNCMIAGCIDNDRI-------------------------------DDAFDYFQAMPERNT 143
W MI+G I R+ DA + F M R+
Sbjct: 170 WLTMISGYIKKRRLREARELFDLSPSHPTSVCNALLSGYVALSCLKDAEELFGRMQRRDP 229
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
++N MI+G+ + GR++ A LF++MP+++ IS+TA++ G+++ G+VD + + + +
Sbjct: 230 VSWNVMITGYARAGRMQVAQSLFDEMPQKDTISWTAVMRGYLQNGDVDASWKVFQDIPDR 289
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+VV+W M+ G+V++ER +A LF MP+ D + ++ G + G + A F
Sbjct: 290 DVVAWNTMMGGFVQSERLDDALRLFAEMPERD--LVSWNTILQGHVQQGDMATANTWFRG 347
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ KD S+N +I+G+ G AL L S MI+ ++PD+ATL V + C++L L G
Sbjct: 348 MPEKDETSWNTLISGHKDEG----ALALLSEMIRGGLRPDEATLSVVISICASLVALGYG 403
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+ H+ ++ GFE + V +++I+MYS+CG I ++ F+ + + V+WN +IA +A H
Sbjct: 404 KMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMIATYAYH 463
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +AL F++M +GF PD TFLS+LSAC H G + E F M + + + P S+H
Sbjct: 464 GMASEALKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRSMQEDWNLTPRSDH 523
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y+C+VD+L R G + +A+ T+ +P + W +L +AC + +V+LGE+ AK + +
Sbjct: 524 YSCMVDLLGRLGFIYQAYDFTRKIPSDLQINAWETLFSACNAHGDVQLGEVIAKDVLQAR 583
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P + +Y +L+N+YA+ MW VR +MKEQG+ K+ SW+E+ +V F D +H
Sbjct: 584 PSDGGMYTLLANIYASKEMWSSAASVRGVMKEQGLKKETGCSWVELKGEVVSFSSNDNAH 643
Query: 564 PCIDKIHLELKRASVQMK 581
P I+ I E+ SV ++
Sbjct: 644 PLIEWICQEVDNLSVMIE 661
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 134/433 (30%), Positives = 220/433 (50%), Gaps = 47/433 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ WNA+IT + + G + ++ +F MP +N+ +WNCMI+G + N + DA F AMP
Sbjct: 42 DIFQWNAVITAHLRAGRVAAARRVFDEMPERNVFTWNCMISGLVGNRMLADARRVFDAMP 101
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
RN ++ A+++G+ + GR+ EA LF++MP RNV+S+ AM+ G+++ G V++AR L D
Sbjct: 102 VRNPVSWAALLTGYARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDM 161
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M +N VSW MI+GY+K R EARELF P + + V A+++G+ + L++A
Sbjct: 162 MPSRNDVSWLTMISGYIKKRRLREARELFDLSPSHPTS--VCNALLSGYVALSCLKDAEE 219
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LF R+Q +D VS+N MI GYA+ G + A LF M + D +TA L
Sbjct: 220 LFGRMQRRDPVSWNVMITGYARAGRMQVAQSLFDEMPQKD--------TISWTAVMRGYL 271
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
N + V ++ + +V N ++ + + + D+ F ++ +LVSWNTI+
Sbjct: 272 QNGDVDASWKVFQDIPDRDVVAWNTMMGGFVQSERLDDALRLFAEMPERDLVSWNTILQG 331
Query: 380 FAQHGHY---------------------------EKALIFFSQMGLNGFDPDGITFLSLL 412
Q G E AL S+M G PD T ++
Sbjct: 332 HVQQGDMATANTWFRGMPEKDETSWNTLISGHKDEGALALLSEMIRGGLRPDEATLSVVI 391
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEH----YTCLVDILSRAGQLEKAWQITQGMP 468
S C + + MV +Y + EH + L+ + S+ G + +A Q+ + +
Sbjct: 392 SICASLVALG-----YGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFK-LL 445
Query: 469 FEADTGVWGSLLA 481
+ DT W +++A
Sbjct: 446 VQRDTVTWNAMIA 458
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAK-----ISALSRAGKISAARQLFDQMTTKDVITW 84
C + ++ L++ + F ++A IS S+ G I+ A Q+F + +D +TW
Sbjct: 394 CASLVALGYGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTW 453
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPE 140
NA+I Y +G E+ LF M ++ +++ C + + YF++M E
Sbjct: 454 NAMIATYAYHGMASEALKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRSMQE 513
Query: 141 RNTAT-----YNAMISGFLKHGRLEEATRLFEQMP 170
T Y+ M+ + G + +A ++P
Sbjct: 514 DWNLTPRSDHYSCMVDLLGRLGFIYQAYDFTRKIP 548
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 311/531 (58%), Gaps = 33/531 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+R + N+ + L+R G++ A + FD+M +D+++WN ++ GY + G + +
Sbjct: 158 LLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSA 217
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
LF +P N+VSW ++ G RI +A + F +P+RN A +N M+SG+L+ +E
Sbjct: 218 AGLFAGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHME 277
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF------------------ 202
EA +LF +MP +N IS+T M+ ++ G++ +A+ L D M F
Sbjct: 278 EAYKLFTEMPDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKM 337
Query: 203 -------------KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
++ V W MI+GYV EA LF +MP+ K++ MI G+
Sbjct: 338 IDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPN--KDMVSWNTMIAGYA 395
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
G + A +F ++ ++ VS+N++I+G+ QNG+ EAL+ F M + + D +T
Sbjct: 396 HDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYAC 455
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+AC+ L L+ GRQ H L+ R+G+ + NA+I+ Y++CG IL++ F ++ +P+
Sbjct: 456 CLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPD 515
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+VSWN +I +A +GH +A+ F +M N PD +TF+ +LSAC HAG ++E D F
Sbjct: 516 IVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFN 575
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
M K Y + P +EHY C+VD+L R+G+L +A++I QGM + + GVWG++L AC ++ N
Sbjct: 576 SMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNH 635
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
EL +LAA+K+ EL+P ++ YV+LSN+ A AG W + +R+ +KE+GV K
Sbjct: 636 ELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHK 686
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 150/523 (28%), Positives = 257/523 (49%), Gaps = 102/523 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+ +N +++ L+R+G+++AAR+LFD M +++ +++NA+++ ++G + +++ LF +P
Sbjct: 11 VYRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPR 70
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN--------------------------- 142
+N VSWN MIA C D+ R+ DA D F AMP R+
Sbjct: 71 RNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRM 130
Query: 143 -----TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
TA YNAMISG+ KHGR ++A L +MP ++IS+ ++L G + GE+ +A
Sbjct: 131 PGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFF 190
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENA 257
D M +++VSW +M+ GYV+ A LF +P NV ++ G+C+ G + A
Sbjct: 191 DEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVP--SPNVVSWVTLLNGYCRAGRIGEA 248
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD-----ATLVSVFT 312
R LF+RI ++ ++N M++GY + EEA +LF+ M PD T++S
Sbjct: 249 RELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEM------PDKNSISWTTMISALV 302
Query: 313 ACSALQ-------------------LLNEGRQSHVL----VIRNGFEANVSVC-NAVITM 348
LQ L++ QS ++ +I +G E +VC N +I+
Sbjct: 303 RGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISG 362
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG----------L 398
Y CG + ++ + F+Q+ + ++VSWNT+IA +A G KA+ F +M +
Sbjct: 363 YVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVI 422
Query: 399 NGFDPDGI---------------------TFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
+GF +G+ T+ LSAC ++ L+ + G
Sbjct: 423 SGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSLLARS-GY 481
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
I S L+ ++ G++ +A Q+ MP D W +L+
Sbjct: 482 IGDSFAGNALISAYAKCGRILEARQVFDEMP-APDIVSWNALI 523
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 309/500 (61%), Gaps = 6/500 (1%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + RAG + A F ++ + +VI+W ++ GY Q G + E++ LF MP +N+V
Sbjct: 202 NLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVV 261
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+WN +++G + +++ A++ F MPE+N+ ++ M+SGF++ G+L+EA + +MP N
Sbjct: 262 AWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDN 321
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V + TA++ G++K +D AR L D + ++ V W MI+GYV+ EA LF +MP+
Sbjct: 322 VGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPN 381
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
K++ MI G + G + A +F +++ ++ VS+N++I+G+ QNG+ EAL+ F
Sbjct: 382 --KDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFM 439
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + D T +A + L L GRQ H L++R GF ++ S NA+I+ Y++CG
Sbjct: 440 LMRRDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCG 499
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+L++ F ++ ++VSWN +I +A +G+ + + F +M N PD IT + +LS
Sbjct: 500 RMLEARQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLS 559
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC HAG ++E + F M+K+Y + P +EHYTC+VD+L RAG+L +A+++ QGM + +
Sbjct: 560 ACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNA 619
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
GVWG+LL AC ++ N E+ LAA+K+ EL+P ++ YV+LSN+ AG W D +VR+LM
Sbjct: 620 GVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLLSNICVEAGKWDDADKVRVLM 679
Query: 534 KEQGVTKQCAYSWIEIGNKV 553
KE + + C I I NK+
Sbjct: 680 KES-ILRSCN---IHISNKM 695
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 219/421 (52%), Gaps = 46/421 (10%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+ VF +N ++++L+R+G+++AAR+LF++M ++V+++NA+++ +G L E++ LF
Sbjct: 6 LTASAVFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLF 65
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN---------------------- 142
MP +N VSWN M+ C + R++DA F AMP RN
Sbjct: 66 DEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARE 125
Query: 143 ----------TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
A YN MISG+ K+GR E+A L ++MP +++S+ ++L G ++ E+ +
Sbjct: 126 LLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISR 185
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
+ D M K++VSW +M+ GYV+ A F R+P NV ++ G+C+ G
Sbjct: 186 SVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIP--SPNVISWVNLVNGYCQAG 243
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ AR LF+R+ ++ V++N +++GY Q E A LF M + + T+VS F
Sbjct: 244 RMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKN-SISWTTMVSGFV 302
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
LQ + V+ NV A++ Y + I D+ F I + V
Sbjct: 303 RSGKLQEAKD-------VLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVC 355
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WNT+I+ + Q G ++A++ F QM + D I++ ++++ C G++ ++ +F M
Sbjct: 356 WNTMISGYVQCGMLDEAMVLFQQMP----NKDMISWNTMIAGCAQGGQIRKAASIFRKMK 411
Query: 433 K 433
+
Sbjct: 412 R 412
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 233/433 (53%), Gaps = 13/433 (3%)
Query: 57 ISALSRAGKISAARQLFDQMT-TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
+S RAG+++ AR+L D+M K +N +I+GY +NG +++ L Q MP +IVSW
Sbjct: 111 VSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSW 170
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
N ++ G I N+ I + +F MP+++ ++N M+ G+++ G L+ A+ F ++P NVI
Sbjct: 171 NSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVI 230
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
S+ +++G+ + G + +AR L D M +NVV+W V+++GYV+ + A LF MP +
Sbjct: 231 SWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMP--E 288
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
KN T M++GF + G L+ A+ + ++ + + A++ GY ++ + ++A +LF G+
Sbjct: 289 KNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGI 348
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ D + T++S + C +L+E +++ + ++ N +I ++ G I
Sbjct: 349 VVRDAVCWN-TMISGYVQCG---MLDEA----MVLFQQMPNKDMISWNTMIAGCAQGGQI 400
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ FR++ N VSWN+II+ F Q+G + +AL F M + D T+ LSA
Sbjct: 401 RKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSAS 460
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ + L+V+ G I S L+ ++ G++ +A Q+ M + D
Sbjct: 461 ANLATLQIGRQFHSLLVRT-GFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQ-DIVS 518
Query: 476 WGSLLAACVINLN 488
W +L+ N N
Sbjct: 519 WNALIDGYASNGN 531
>gi|359477774|ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 691
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/564 (35%), Positives = 319/564 (56%), Gaps = 39/564 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N I+ L + G I+ A ++F +M +DV++WN++I+GY NG + E+ +F M +
Sbjct: 103 IFSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVL 162
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K++VSWN +IAG + ++D A ++F+ M R+ A++ MISG GR+ EA LFE M
Sbjct: 163 KDVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLFEDM 222
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P R+V ++ M+ G+++ G ++ L M ++ SW MI G V+N+R +A LF
Sbjct: 223 PVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQDAMRLFV 282
Query: 230 RMPD-----YDKNVFVV------------------------TAMITGFCKVGMLENARLL 260
MP ++ VF + T +I G+ + G ++ A +
Sbjct: 283 EMPQKCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSI 342
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
FE + +D ++N +I G +N EE L+ F M + PD+AT SV T CS L L
Sbjct: 343 FELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTL 402
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+ GRQ H V + GF V+V NA++T+Y+RCG + L F + S + +SWN+II
Sbjct: 403 HLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSAMRSHDFISWNSIICGL 462
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A +G+ +A+ F +M P+ ITF+ +LSAC HAG V++ F+ M + P+
Sbjct: 463 AHNGNGVEAIEVFEKMRSIDIKPNHITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPT 522
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMP---FEADTGVWGSLLAACVINLNVELGELAAK 497
EHYTC+VD+L R G +++A + M E VWG++L AC I+ N+++GE+A +
Sbjct: 523 IEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNMQVGEIAGE 582
Query: 498 KMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
++ E++P NS VY++L+ +Y ++G D RV + M+E+GV KQ A SW+E+ H FL
Sbjct: 583 RILEIEPHNSGVYIILAEMYLSSGKREDAERVWVRMREKGVKKQPACSWMEVNGSGHVFL 642
Query: 558 GGDMSHPCIDKI-------HLELK 574
GD SHP ++ H+E++
Sbjct: 643 SGDSSHPQFSRVCGVLGLLHMEME 666
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 263/522 (50%), Gaps = 31/522 (5%)
Query: 11 YLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVF---VNNAKISALSRAGKIS 67
++ R + P L ++ + + G + P S I+ +ST + N++IS R G
Sbjct: 2 FISRPIQLPKLAVVLSLNFTGKWIPTRS---IQSYSTSALLNLKPLNSRISDCMRNGFTE 58
Query: 68 AARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDR 127
A+ LFD+M ++ +T+NA+I GY+QNG E +LF MP ++I S+N MIAG +
Sbjct: 59 EAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDIFSYNTMIAGLMKFGD 118
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
I+ A + FQ MP R+ ++N+MISG++ +G + EA R+F M ++V+S+ ++ G +
Sbjct: 119 INGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVLKDVVSWNLVIAGLVGV 178
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
G+VD A M +++ SWT MI+G R EAR LF MP D + MI G
Sbjct: 179 GKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLFEDMPVRDVRAW--NTMIAG 236
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ + G +E +LF+++ +D S+N MI G +N ++A+RLF ++M + +
Sbjct: 237 YIENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQDAMRLF---VEMPQKCRRSWN 293
Query: 308 VSVFTACSALQLLNEG--RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
VF L+ G +++H + ++ F VS N ++ Y G + + F +
Sbjct: 294 SIVFG------LIRNGLIKEAHAFLEKSPFSDTVSWTNLIVG-YFETGEVDTAVSIFELM 346
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+ + +WN II ++ H E+ L FF +M G PD TF S+L+ C ++
Sbjct: 347 PARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGR 406
Query: 426 DLFELMVKV---YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + K Y + S+ +V + +R G A + M D W S++
Sbjct: 407 QIHAQVTKTGFNYFVAVSN----AMVTLYARCGNSNSALLLFSAMR-SHDFISWNSIICG 461
Query: 483 CVINLN-VELGELAAKKMRELDPQ-NSAVYVMLSNLYAAAGM 522
N N VE E+ +KMR +D + N +V + + + AG+
Sbjct: 462 LAHNGNGVEAIEV-FEKMRSIDIKPNHITFVGVLSACSHAGL 502
>gi|297744236|emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/514 (37%), Positives = 316/514 (61%), Gaps = 7/514 (1%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
+ L+ AG+I AR+LF+ M ++V++WN+++ G ++G L+E++ +F MPVK+ VSWN
Sbjct: 145 LCGLANAGRIGEARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWN 204
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
MIAG ++ R+++A F M +RN T+ +MISG+ + G ++E LF++MP RNV+S
Sbjct: 205 VMIAGYAEHSRMEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVS 264
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+TAM+ GF G +A + MS+ N S MI GY++ + +A+ LF +P DK
Sbjct: 265 WTAMIGGFAWNGFYKEAL---NSMSY-NTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDK 320
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+ T+MI G+ VG + A LF + +D V++ M++G+ QN + EA LFS M
Sbjct: 321 ISW--TSMINGYFNVGQIAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMR 378
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ P ++T + A A+ L++GRQ H L+++ FE ++ + N++I+MY++CG I
Sbjct: 379 VKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIG 438
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F ++ S +L+SWN++I F+ HG +AL F M +G P+ +TFL +LSAC
Sbjct: 439 DAYSIFSKMISRDLISWNSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSACS 498
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
HAG +N+ +LF+ M V+ I P EHY C+V++L RAG++E+A + +PFE D +W
Sbjct: 499 HAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIW 558
Query: 477 GSLLAACVINL-NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
G+LL C + N + AAK++ ELDP N+ +V+L N++A+ G + ++R M
Sbjct: 559 GALLGVCGFGMINTGVARRAAKRLLELDPLNAPAHVVLCNIHASIGQRAEEGQLRKEMGL 618
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
+GV K SWI + + + FL GD HP D++
Sbjct: 619 KGVRKVPGCSWILLKGEPYVFLSGDRIHPQADEM 652
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 240/468 (51%), Gaps = 32/468 (6%)
Query: 24 LSTPDSCGNFTPHSSNCLIRLFSTQYV---FVNNAKISALSRAGKISAARQLFDQMTTKD 80
LS+ C F H I L T Y F ++ + LS+ ++ AR + D+M +
Sbjct: 13 LSSNLYCRRFHVHRFKPQIPLSGTHYSKLRFDDSQILECLSQQ-RLREARHMLDEMPNRG 71
Query: 81 V----ITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
V + W ++++ + +NGF+ E++ LF+ MP +N+V++N M++G + R+ DA +F+
Sbjct: 72 VLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDACRFFE 131
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
MPERN ++ +++ G GR+ EA LF MP RNV+S+ +ML G ++ G++++AR +
Sbjct: 132 EMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRV 191
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+ M K+ VSW VMI GY ++ R EAR LF M D+NV T+MI+G+C+ G ++
Sbjct: 192 FNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMG--DRNVVTWTSMISGYCRAGNVQE 249
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
LF+++ ++ VS+ AMI G+A NG +EAL M + + S+
Sbjct: 250 GYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALN--------SMSYNTQSCNSMINGYIR 301
Query: 317 LQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+ L + + + +R+ ++I Y G I + F + + V+W
Sbjct: 302 IGQLEKAQSLFDTIPVRDKIS-----WTSMINGYFNVGQIAKACYLFNNMPDRDAVAWTV 356
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV- 434
+++ Q+ + +A FS+M + G P TF LL A G +++ L++K
Sbjct: 357 MVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQ 416
Query: 435 --YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ +I + L+ + ++ G++ A+ I M D W S++
Sbjct: 417 FEFDLILQNS----LISMYAKCGEIGDAYSIFSKM-ISRDLISWNSMI 459
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
SG ++ DD+ ++ C + Q L E R + G V ++++ +S+
Sbjct: 33 LSGTHYSKLRFDDSQILE----CLSQQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSK 88
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G I ++ F + N+V++N +++ + Q G A FF +M + + +++ SL
Sbjct: 89 NGFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDACRFFEEMP----ERNVVSWTSL 144
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L +AG++ E+ +LF +M + + + ++ L R+GQLE+A ++ MP ++
Sbjct: 145 LCGLANAGRIGEARELFNVMPERNVV-----SWNSMLVGLIRSGQLEEARRVFNEMPVKS 199
Query: 472 DTGVWGSLLAA 482
W ++A
Sbjct: 200 QVS-WNVMIAG 209
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/506 (37%), Positives = 303/506 (59%), Gaps = 3/506 (0%)
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID-NDRIDDAFDYF 135
T DV++ N I + + L+ ++N+F+ M V+ V+WN M++G ++ +A + F
Sbjct: 69 TASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELF 128
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+PE ++ +YN M+ +L+ +E A F +MP +++ S+ ++ GF + G++ KA
Sbjct: 129 DKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFD 188
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
L M KN VSW+ MI+GYV++ A EL+ + K+V V TAM+TG+ K G +E
Sbjct: 189 LFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGM--KSVVVETAMLTGYMKFGKVE 246
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A +F+R+ K+ V++N+MIAGY +N AE+ L++F MI+ ++P+ +L SV CS
Sbjct: 247 LAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS 306
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L L GRQ H LV ++ + + C ++I+MY +CG + + F ++ +++SWN
Sbjct: 307 NLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNA 366
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+I+ +AQHG KAL F +M PD ITF++++ AC HAG V+ + F+ M K +
Sbjct: 367 MISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEF 426
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
GI HYTC++D+L RAG+L++A + + MPF+ ++G+LL AC I+ N++L E A
Sbjct: 427 GIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFA 486
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
A+ + LDP ++ YV L+N+YAA W V +VR +MKE V K YSWIEI + H
Sbjct: 487 ARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHE 546
Query: 556 FLGGDMSHPCIDKIHLELKRASVQMK 581
F D HP + IH +L +MK
Sbjct: 547 FRSSDRLHPELTSIHKKLNELDGKMK 572
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 203/398 (51%), Gaps = 50/398 (12%)
Query: 54 NAKISALSR-AGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
N +S ++ AGK+ A +LFD++ D +++N ++ Y ++ ++ + F MPVK+I
Sbjct: 108 NTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDI 167
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
SWN +I+G N ++ AFD F MPE+N +++AMISG+++HG LE A L++ + +
Sbjct: 168 ASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMK 227
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+V+ TAML G+MK G+V+ A + M+ KN+V+W MI GYV+N R + ++F M
Sbjct: 228 SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMI 287
Query: 233 D-------------------------------------YDKNVFVVTAMITGFCKVGMLE 255
+ K+ T++I+ +CK G L+
Sbjct: 288 ESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLD 347
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A LF + KD +S+NAMI+GYAQ+G +AL LF M M+PD T V+V AC+
Sbjct: 348 SAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACN 407
Query: 316 ALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGI-----LDSELAFRQIHSPN 369
++ G Q + + G EA VI + R G + L E+ F+ P+
Sbjct: 408 HAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFK----PH 463
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
+ T++ A H + + L F+ L DP T
Sbjct: 464 AAIYGTLLGACRIHKNLD--LAEFAARNLLNLDPTSAT 499
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 87/159 (54%), Gaps = 8/159 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V V A ++ + GK+ A ++F +M K+++TWN++I GY +N ++ +F++M
Sbjct: 229 VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIE 288
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEE 161
N +S + ++ GC + + Q + + ++T ++IS + K G L+
Sbjct: 289 SRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDS 348
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
A +LF +MPR++VIS+ AM+ G+ + G KA L D M
Sbjct: 349 AWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKM 387
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 50/270 (18%)
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ-NGVAEEALRL 291
D +V + I F + LE+AR +FE++ + V++N M++GY + G +EA L
Sbjct: 68 DTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHEL 127
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
F + +PD + N ++ Y R
Sbjct: 128 FDKI----PEPDSVSY-----------------------------------NIMLVCYLR 148
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G+ + F ++ ++ SWNT+I+ FAQ+G +KA FS M + +G+++ ++
Sbjct: 149 SYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP----EKNGVSWSAM 204
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+S G + + +L++ V + ++ T ++ + G++E A +I Q M +
Sbjct: 205 ISGYVEHGDLEAAEELYK-NVGMKSVVVE----TAMLTGYMKFGKVELAERIFQRMAVK- 258
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRE 501
+ W S++A V N E G K M E
Sbjct: 259 NLVTWNSMIAGYVENCRAEDGLKVFKTMIE 288
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/531 (35%), Positives = 310/531 (58%), Gaps = 33/531 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+R +F N+ ++ L+++G++ A Q FD+M KD+++WN ++ G+ + G L +
Sbjct: 165 LLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAA 224
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ F + N+VSW ++ G RI DA D F MPERN N M+ G+++ RLE
Sbjct: 225 ASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVRLSRLE 284
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
EA +LF++MP +N IS+T ++ G + G++ +A+ L D MSF V + T ++ GY++
Sbjct: 285 EACKLFDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNM 344
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
+AR++F M +D + MI+G+ + GMLE A LLF+R+ KD VS+N MIAGYA
Sbjct: 345 VNDARQIFDGMEVHDTVCW--NTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYA 402
Query: 281 QNGVAEEALRLFSGMIKMDM-------------------------------QPDDATLVS 309
Q G +A+ +F M + + + D +T S
Sbjct: 403 QGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYAS 462
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
AC+ L L+ GRQ H L++R+G ++ NA+I+ Y++CG +L+++ F ++ +
Sbjct: 463 CLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKD 522
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+VSWN ++ +A +G +A+ F +M NG PD +TF+ +LSAC AG ++E + F
Sbjct: 523 IVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFN 582
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
M + Y + P +EHY C+ D+L RAG+L +A+++ QGM + + GVWG+LL AC + N
Sbjct: 583 SMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNH 642
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
EL LAA+K+ EL+P ++ YV+LSN+ A AG W + + R +KE+G K
Sbjct: 643 ELARLAAEKLSELEPCRASNYVLLSNISAEAGKWDEAEKARASIKEKGANK 693
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 252/526 (47%), Gaps = 108/526 (20%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF +N +++ L+R+G+++AAR+LFD M ++ +T+N++++ ++G + E++ LF MP
Sbjct: 18 VFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPS 77
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN--------------------------- 142
+N VSWN MIA D+ R+ DA F MP R+
Sbjct: 78 RNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRM 137
Query: 143 -----TATYNAMISGFLKHGRLEEATRLFEQMP--------------------------- 170
TA YNAMISG+ K+GR ++A +L +MP
Sbjct: 138 PGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFF 197
Query: 171 ----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
++++S+ ML+GF++ G++D A + + NVVSW ++ GY + R +AR+
Sbjct: 198 DEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARD 257
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
LF RMP ++NV M+ G+ ++ LE A LF+ + K+ +S+ +I+G A+ G +
Sbjct: 258 LFDRMP--ERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLARAGKLQ 315
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC-NAV 345
EA L M + A + ++N+ RQ I +G E + +VC N +
Sbjct: 316 EAKDLLDKMSFNCVAAKTALMHGYLQR----NMVNDARQ-----IFDGMEVHDTVCWNTM 366
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG-------- 397
I+ Y + G + ++ L F+++ + + VSWNT+IA +AQ G KA+ F +M
Sbjct: 367 ISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWN 426
Query: 398 --LNGFDPDGI---------------------TFLSLLSACGHAGKVNESMDLFELMVKV 434
++GF +G+ T+ S L AC + ++ L L+V+
Sbjct: 427 SVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVR- 485
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
G I L+ ++ G++ +A QI M D W +L+
Sbjct: 486 SGHINDLFARNALISTYAKCGRMLEAKQIFDEM-VGKDIVSWNALV 530
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
N +T +R G + + F + N V++N++++A A+HG ++A F M
Sbjct: 22 NQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMP----S 77
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY--TCLVDILSRAGQLEKA 460
+ +++ ++++A G+V ++ LF+ M PS + + T +V +RAG+LE A
Sbjct: 78 RNAVSWNAMIAALSDHGRVADARGLFDRM-------PSRDDFSWTVMVSCYARAGELELA 130
Query: 461 WQITQGMPFEADTGVWGSLLAACVIN 486
+ MP + T + ++++ N
Sbjct: 131 RDVLDRMPGDKCTACYNAMISGYAKN 156
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/620 (32%), Positives = 335/620 (54%), Gaps = 78/620 (12%)
Query: 39 NCLI-RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CLI + + F+ N I+A S+ G I+ AR +FD+M + +WN +++ Y ++G L
Sbjct: 28 HCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDL 87
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAM--- 149
+ +F MP ++ VSWN +I+G + + +A + +M + N T++ M
Sbjct: 88 STMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLL 147
Query: 150 --------------------------------ISGFLKHGRLEEATRLFEQMPRRNVISY 177
+ + K G + A+++F+++ RNV+ Y
Sbjct: 148 VSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMY 207
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------ 231
M+ G ++ G V ++ L M ++ +SWT MITG ++N EA +LF M
Sbjct: 208 NTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMA 267
Query: 232 -------------------------------PDYDKNVFVVTAMITGFCKVGMLENARLL 260
Y+ NVFV +A++ +CK + A +
Sbjct: 268 MDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAV 327
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+R+ K+ VS+ AM+ GY QNG +EEA+R+F M + ++PDD TL SV ++C+ L L
Sbjct: 328 FKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASL 387
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
EG Q H + +G + ++V NA+IT+Y +CG I DS F ++ + VSW +++ +
Sbjct: 388 EEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGY 447
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
AQ G + + F +M + G PD +TF+++LSAC AG V FE M+K +GIIP
Sbjct: 448 AQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPF 507
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
S+HYTC++D+ RAG+LE+A MPF D+ W +LL++C + N E+G+ AA+ +
Sbjct: 508 SDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLL 567
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
ELDPQN A Y++LS++YAA G W +V ++R M+E+G K+ +SWI+ +KV+ F D
Sbjct: 568 ELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADD 627
Query: 561 MSHPCIDKIHLELKRASVQM 580
S P D+I+ EL++ + +M
Sbjct: 628 QSSPFSDQIYAELEKLNHKM 647
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 227/502 (45%), Gaps = 83/502 (16%)
Query: 12 LKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQ 71
L RI F +L ++S+ C + +++ YVFV ++ + ++ G +S A Q
Sbjct: 136 LNRITFSTMLLLVSS-QGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA 131
+FD++ ++V+ +N +ITG ++G +++SK LF M ++ +SW MI G I N +A
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 132 FDYFQAMPERNTA----TYNAMISG-----FLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
D F+ M + A T+ ++++ LK G+ E T + NV +A++D
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGK-EIHTLIIRSGYNHNVFVGSALVD 313
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD--- 233
+ K V A A+ M+ KNVVSWT M+ GY +N EA +F M PD
Sbjct: 314 MYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFT 373
Query: 234 ----------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+ V A+IT + K G +E++ LF+ +
Sbjct: 374 LGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMS 433
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+D VS+ A+++GYAQ G A E + LF M+ ++PD T ++V +ACS L+ G+Q
Sbjct: 434 FRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQ 493
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
++++ GI+ P + +I F + G
Sbjct: 494 YFESMLKD-------------------HGII-----------PFSDHYTCMIDLFGRAGR 523
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E+A F ++M F PD I + +LLS+C G E ++++ P+ Y
Sbjct: 524 LEEAKNFINKM---PFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAG--YI 578
Query: 446 CLVDILSRAGQLEKAWQITQGM 467
L I + G+ Q+ +GM
Sbjct: 579 LLSSIYAAKGKWSNVAQLRRGM 600
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 109/225 (48%), Gaps = 8/225 (3%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C + + ++ H L+I++ + N +I YS+ G I + F ++ PN SW
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
NT+++A+++ G FS M + DG+++ SL+S G V E++ + M+K
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMP----NRDGVSWNSLISGYVCYGSVVEAVKTYNSMMK 130
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG- 492
+ + ++ ++ ++S G ++ QI G + G + + + ++++ ++G
Sbjct: 131 DGVLNLNRITFSTMLLLVSSQGCVDLGRQI-HGQIVKFGFGAY-VFVGSSLVDMYAKMGL 188
Query: 493 -ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
+A++ E+ +N +Y + +GM +D R+ MKE+
Sbjct: 189 VSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKER 233
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/533 (36%), Positives = 299/533 (56%), Gaps = 53/533 (9%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN 125
+ R LFD+M +D ++WN +I+GY ++G + E+ LF SM +N+VSWN M+ G + N
Sbjct: 147 VEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQN 206
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR--------------------- 164
++ A ++F MPER++A+ +A+++G +++G L+EA R
Sbjct: 207 GDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNI 266
Query: 165 ----------------LFEQMP------------RRNVISYTAMLDGFMKKGEVDKARAL 196
LF+Q+P RNV+S+ +M+ ++K ++ AR L
Sbjct: 267 LLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVL 326
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
D M ++ +SW MI+GYV+ EA LF MP+ D +MI+GF + G LE
Sbjct: 327 FDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPD--TLTWNSMISGFAQKGNLEL 384
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR LF I K+ VS+N+MIAGY NG + A L+ M+ +PD TL SV + CS
Sbjct: 385 ARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSG 444
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNT 375
L+ G Q H + + ++ + N++ITMYSRCG I+++ F ++ ++SWN
Sbjct: 445 FAALHLGMQIHQQITKTVI-PDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNA 503
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+I +A HG AL F M P ITF+S+L+AC HAG V E F+ M +
Sbjct: 504 MIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMACEF 563
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
GI P EH+ LVDI+ R GQLE+A + MPFE D VWG+LL AC ++ NVEL +A
Sbjct: 564 GIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNVELARVA 623
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
A+ + +L+P++SA YV+L N+YA G W + T +R++M+ + KQ YSW++
Sbjct: 624 AEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPGYSWVD 676
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 217/446 (48%), Gaps = 47/446 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ T N I+ +NG + E++ LF +MP +NIV+WN MI G + + A F MP
Sbjct: 66 DLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMP 125
Query: 140 ERNTATYNAMISGFLK-HGR-LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
+R+ ++N MISG++ GR +EE LF++MP R+ +S+ M+ G+ + G +D+A L
Sbjct: 126 DRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLF 185
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENA 257
D M +NVVSW M+TG+++N A E F RMP+ D ++A++ G + G L+ A
Sbjct: 186 DSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSA--SLSALVAGLIQNGELDEA 243
Query: 258 R--LLFERIQPKD----CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA-----T 306
+ LL R Q D ++N ++AGY QNG ++A +LF + D D
Sbjct: 244 KRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERN 303
Query: 307 LVS-------------VFTACSALQLLNEGRQSHVLVIRNGF-----------------E 336
+VS +F+A + E + +G+
Sbjct: 304 VVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPN 363
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ N++I+ +++ G + + F I NLVSWN++IA + +G Y+ A + QM
Sbjct: 364 PDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQM 423
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
L G PD T S+LS C ++ M + + + K +IP L+ + SR G
Sbjct: 424 LLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKT--VIPDIPINNSLITMYSRCGA 481
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAA 482
+ +A I + + + W +++
Sbjct: 482 IVEARTIFDEVKLQKEVISWNAMIGG 507
>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/535 (37%), Positives = 308/535 (57%), Gaps = 49/535 (9%)
Query: 60 LSRAGK-ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCM 118
+S GK + AR +FDQM D ++WN +++GY ++G + +++ LF MP +N+VSWN M
Sbjct: 130 ISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPERNVVSWNAM 189
Query: 119 IAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR-------------- 164
++G + N ++ A ++F+ MP+R++A+ A+ISG +++ +L EA R
Sbjct: 190 VSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEAERILLQYGGNVGKGDL 249
Query: 165 ----------------------LFEQMP--------RRNVISYTAMLDGFMKKGEVDKAR 194
LF+++P RRNVIS+ +M+ +++ G++ AR
Sbjct: 250 VDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSAR 309
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
L D M ++ SW MI+GYV+ EA LF RMP+ D MI+GF ++G L
Sbjct: 310 ELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPD--TLSWNMMISGFSEIGSL 367
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ A LF+RI K VS+N+MI+GY +N + A+ +F M +PD TL S+ +AC
Sbjct: 368 KLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSAC 427
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSW 373
+ L L G Q H LV + F A++ + N+++TMYSRCG I+++ + F +++ +++SW
Sbjct: 428 AGLVDLVLGTQIHQLVTK-AFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISW 486
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N +I +A HG +AL F M P ITF+S+L+AC HAG + E F MV
Sbjct: 487 NAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVN 546
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+GI P EHY LVDI+ R GQLE+A + MP E D VWG+LL AC ++ NVE+
Sbjct: 547 THGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMAR 606
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
AA+ + +L P++SA YV+L N+YA G W D +R +M++ V K YS ++
Sbjct: 607 AAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRVD 661
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 230/445 (51%), Gaps = 29/445 (6%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N KIS L R G+I+ AR+LFD + ITWN +IT Y + + +++ LF+ MP ++IV
Sbjct: 61 NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIV 120
Query: 114 SWNCMIAGCID--NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
SWN M++G I ++ A + F MPE + ++N M+SG+ K G +++A LF +MP
Sbjct: 121 SWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPE 180
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
RNV+S+ AM+ G++ G V+KA M ++ S +I+G ++N++ EA + +
Sbjct: 181 RNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEAERILLQ- 239
Query: 232 PDYDKNVF------VVTAMITGFCKVGMLENARLLFERI--------QPKDCVSFNAMIA 277
Y NV +I G+ + GM AR LF+RI ++ +S+N+MI
Sbjct: 240 --YGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIM 297
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
Y + G A LF M++ D + T++S + +Q+L+ S++ E
Sbjct: 298 CYVRAGDIVSARELFDKMVERDTFSWN-TMISGY-----VQILDMKEASNLF--SRMPEP 349
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ N +I+ +S G + + F++I +LVSWN++I+ + ++ Y+ A+ F QM
Sbjct: 350 DTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 409
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
L G PD T S+LSAC + + +L+ K + I LV + SR G +
Sbjct: 410 LEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAF--IADLPINNSLVTMYSRCGAI 467
Query: 458 EKAWQITQGMPFEADTGVWGSLLAA 482
+A + M + D W +++
Sbjct: 468 VEARMVFDEMNLQRDVISWNAMIGG 492
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 212/446 (47%), Gaps = 36/446 (8%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY 146
I+ + Q F N FQ V S N I+ I RI++A + F + NT T+
Sbjct: 35 IVFQFKQTCFSSSKANSFQ---VPEFYSLNKKISYLIRTGRINEARELFDSTEHWNTITW 91
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE--VDKARALSDYMSFKN 204
N MI+ ++K + +A +LFE+MP R+++S+ ML G++ G V++AR + D M +
Sbjct: 92 NRMITAYVKRREMLKARQLFEEMPNRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETD 151
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
VSW M++GY K+ +A ELF MP ++NV AM++G+ G +E A F+ +
Sbjct: 152 CVSWNTMLSGYAKSGMMDKAEELFNEMP--ERNVVSWNAMVSGYLMNGHVEKAIEFFKLM 209
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRL---FSGMI-KMDMQPDDATLVSVF----TACSA 316
+D S A+I+G QN EA R+ + G + K D+ TL++ + A A
Sbjct: 210 PKRDSASLRALISGLIQNDKLVEAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEA 269
Query: 317 LQLLNEGRQSHVLVIRNGF-EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+L + L G+ NV N++I Y R G I+ + F ++ + SWNT
Sbjct: 270 RKLFDR----IPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNT 325
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+I+ + Q ++A FS+M +PD +++ ++S G + + DLF+ + +
Sbjct: 326 MISGYVQILDMKEASNLFSRMP----EPDTLSWNMMISGFSEIGSLKLAHDLFKRIPE-- 379
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA---DTGVWGSLLAACV----INLN 488
S + ++ + + A I M E D S+L+AC + L
Sbjct: 380 ---KSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLG 436
Query: 489 VELGELAAKKMRELDPQNSAVYVMLS 514
++ +L K P N+++ M S
Sbjct: 437 TQIHQLVTKAFIADLPINNSLVTMYS 462
>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/535 (36%), Positives = 308/535 (57%), Gaps = 49/535 (9%)
Query: 60 LSRAGK-ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCM 118
+S GK + AR +FDQM D ++WN +++GY ++G + +++ LF MP +N+VSWN M
Sbjct: 130 ISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMPERNVVSWNAM 189
Query: 119 IAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR-------------- 164
++G + N ++ A ++F+ MP+R++A+ A++SG +++ +L EA R
Sbjct: 190 VSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAERILLQYGGNVGKGDL 249
Query: 165 ----------------------LFEQMP--------RRNVISYTAMLDGFMKKGEVDKAR 194
LF+++P RRNVIS+ +M+ +++ G++ AR
Sbjct: 250 VDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSAR 309
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
L D M ++ SW MI+GYV+ EA LF RMP+ D MI+GF ++G L
Sbjct: 310 ELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPD--TLSWNMMISGFSEIGSL 367
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ A LF+RI K VS+N+MI+GY +N + A+ +F M +PD TL S+ +AC
Sbjct: 368 KLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSAC 427
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSW 373
+ L L G Q H LV + F A++ + N+++TMYSRCG I+++ + F +++ +++SW
Sbjct: 428 AGLVDLVLGTQIHQLVTK-AFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISW 486
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N +I +A HG +AL F M P ITF+S+L+AC HAG + E F MV
Sbjct: 487 NAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVN 546
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+GI P EHY LVDI+ R GQLE+A + MP E D VWG+LL AC ++ NVE+
Sbjct: 547 THGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMAR 606
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
AA+ + +L P++SA YV+L N+YA G W D +R +M++ V K YS ++
Sbjct: 607 AAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRVD 661
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 230/445 (51%), Gaps = 29/445 (6%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N KIS L R G+I+ AR+LFD + ITWN +IT Y + + +++ LF+ MP ++IV
Sbjct: 61 NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIV 120
Query: 114 SWNCMIAGCID--NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
SWN M++G I ++ A + F MPE + ++N M+SG+ K G +++A LF +MP
Sbjct: 121 SWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMPE 180
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
RNV+S+ AM+ G++ G V+KA M ++ S +++G ++N++ EA + +
Sbjct: 181 RNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAERILLQ- 239
Query: 232 PDYDKNVF------VVTAMITGFCKVGMLENARLLFERI--------QPKDCVSFNAMIA 277
Y NV +I G+ + GM AR LF+RI ++ +S+N+MI
Sbjct: 240 --YGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIM 297
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
Y + G A LF M++ D + T++S + +Q+L+ S++ E
Sbjct: 298 CYVRAGDIVSARELFDKMVERDTFSWN-TMISGY-----VQILDMKEASNLF--SRMPEP 349
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ N +I+ +S G + + F++I +LVSWN++I+ + ++ Y+ A+ F QM
Sbjct: 350 DTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 409
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
L G PD T S+LSAC + + +L+ K + I LV + SR G +
Sbjct: 410 LEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAF--IADLPINNSLVTMYSRCGAI 467
Query: 458 EKAWQITQGMPFEADTGVWGSLLAA 482
+A + M + D W +++
Sbjct: 468 VEARMVFDEMNLQRDVISWNAMIGG 492
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 209/440 (47%), Gaps = 36/440 (8%)
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG 152
Q F N FQ V S N I+ I RI++A + F + NT T+N MI+
Sbjct: 41 QTCFSSSKANSFQ---VPEFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITA 97
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE--VDKARALSDYMSFKNVVSWTV 210
++K + +A +LFE+MP R+++S+ ML G++ G V++AR + D M + VSW
Sbjct: 98 YVKRREMLKARQLFEEMPNRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNT 157
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
M++GY K+ +A ELF MP ++NV AM++G+ G +E A F+ + +D
Sbjct: 158 MLSGYAKSGTMDKAEELFNEMP--ERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSA 215
Query: 271 SFNAMIAGYAQNGVAEEALRL---FSGMI-KMDMQPDDATLVSVF----TACSALQLLNE 322
S A+++G QN EA R+ + G + K D+ TL++ + A A +L +
Sbjct: 216 SLRALVSGLIQNDKLVEAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDR 275
Query: 323 GRQSHVLVIRNGF-EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
L G+ NV N++I Y R G I+ + F ++ + SWNT+I+ +
Sbjct: 276 ----IPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYV 331
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
Q ++A FS+M +PD +++ ++S G + + DLF+ + + S
Sbjct: 332 QILDMKEASNLFSRMP----EPDTLSWNMMISGFSEIGSLKLAHDLFKRIPE-----KSL 382
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEA---DTGVWGSLLAACV----INLNVELGEL 494
+ ++ + + A I M E D S+L+AC + L ++ +L
Sbjct: 383 VSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQL 442
Query: 495 AAKKMRELDPQNSAVYVMLS 514
K P N+++ M S
Sbjct: 443 VTKAFIADLPINNSLVTMYS 462
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 188/502 (37%), Positives = 296/502 (58%), Gaps = 2/502 (0%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+I N+++ + + + ++ F M K+IVSWN MI+G +NDR+D A +F MP
Sbjct: 135 DLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMP 194
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
ERN ++ +MI G++K G + EA LF+ MP +++ S+ M+ G+M G+ AR +
Sbjct: 195 ERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGK 254
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M + SW +MI+G+ K A++ F RMP+ KNV M+ G+ K G AR
Sbjct: 255 MPIHDTGSWNIMISGFCKAGELESAKDFFDRMPN--KNVISWGIMLDGYIKNGDTNGARC 312
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LF+++ K+ V+++ MI GYA+NG +AL LF + D++PD+ ++ + +ACS L +
Sbjct: 313 LFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGI 372
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
++ + +++ V ++I MY++CG I + F H +L+ ++T+IAA
Sbjct: 373 IDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAA 432
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
A HG A+ F +M PD +TFL +L+AC H G V+E F+ M + +GI P
Sbjct: 433 LANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQP 492
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
S +HY C+VD+L R G LE+A+ + + MP + VWG+LLAAC ++ NV+L E+AA ++
Sbjct: 493 SEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAEL 552
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
+++P NS Y++LSN+YAAAG W V +VR ++E V K SWIE+ + VH F+ G
Sbjct: 553 FKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMG 612
Query: 560 DMSHPCIDKIHLELKRASVQMK 581
DMSH D I L L MK
Sbjct: 613 DMSHTDSDSISLILYLLCEDMK 634
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 212/411 (51%), Gaps = 45/411 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N IS ++ AR+ FD+M ++V++W ++I GY + G + E++ LF SMPVK++
Sbjct: 171 NMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLA 230
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN M++G +D +A F MP +T ++N MISGF K G LE A F++MP +N
Sbjct: 231 SWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKN 290
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
VIS+ MLDG++K G+ + AR L D M KN+V+W+ MI GY +N + +A ELF R +
Sbjct: 291 VISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKE 350
Query: 234 YD-------------------------------------KNVFVVTAMITGFCKVGMLEN 256
D ++ V T++I + K G +E
Sbjct: 351 QDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEK 410
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A +FE PKD + ++ MIA A +G+ +A+ LF M + +++PD T + V TAC+
Sbjct: 411 ALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNH 470
Query: 317 LQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWN 374
L++EGR+ + G + + V+ + R G + ++ R + +P+ V W
Sbjct: 471 GGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWG 530
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDG----ITFLSLLSACGHAGKV 421
++AA H + + A + ++ L +PD I ++ +A G G V
Sbjct: 531 ALLAACRVHCNVQLAEVAAAE--LFKIEPDNSGNYILLSNIYAAAGRWGSV 579
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
FV+ ++ + + G + A +F+ I + + ++I GY +N +EA LF M +
Sbjct: 36 FVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRRE 95
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ + T+ SV A + L G+ + V++ GF ++ V N+V+ ++ RC + +
Sbjct: 96 PISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTA 155
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
AF ++ ++VSWN +I+ + + + A FF +M + + +++ S++ A
Sbjct: 156 RQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMP----ERNVVSWTSMICGYVKA 211
Query: 419 GKVNESMDLFELM-VK-----------------------VYGIIP--SSEHYTCLVDILS 452
G + E+ LF+ M VK ++G +P + + ++
Sbjct: 212 GDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISGFC 271
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+AG+LE A MP + WG +L + N
Sbjct: 272 KAGELESAKDFFDRMP-NKNVISWGIMLDGYIKN 304
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 6/181 (3%)
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
L+I + ++ V N ++ +YSR G + F +I PN W ++I + ++ Y++
Sbjct: 25 LLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDE 84
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
A F QM T S+L A + ++ ++K YG ++
Sbjct: 85 AFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLK-YGFAFDLIVQNSVL 143
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
D+ R +++ A Q M E D W +++ N V++ A+K + P+ +
Sbjct: 144 DLFMRCRKVDTARQAFDEM-CEKDIVSWNMMISGYGNNDRVDI----ARKFFDRMPERNV 198
Query: 509 V 509
V
Sbjct: 199 V 199
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/506 (36%), Positives = 302/506 (59%), Gaps = 3/506 (0%)
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID-NDRIDDAFDYF 135
T DV++ N I + + L+ ++N+F+ M V+ V+WN M++G ++ +A + F
Sbjct: 69 TASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELF 128
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+PE ++ +YN M+ +L+ ++ A F +MP +++ S+ ++ GF + G++ KA
Sbjct: 129 DKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFD 188
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
L M KN VSW+ MI+GYV++ A EL+ + K+V V TAM+TG+ K G +E
Sbjct: 189 LFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGM--KSVVVETAMLTGYMKFGKVE 246
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A +F+R+ K+ V++N+MIAGY +N AE+ L++F MI+ ++P+ +L SV CS
Sbjct: 247 LAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS 306
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L L GRQ H LV ++ + + C ++I+MY +CG + + F ++ ++++WN
Sbjct: 307 NLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNA 366
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+I+ +AQHG KAL F +M PD ITF++++ AC HAG V+ + F+ M K +
Sbjct: 367 MISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEF 426
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
GI HYTC++D+L RAG+L++A + + MPF ++G+LL AC I+ N++L E A
Sbjct: 427 GIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFA 486
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
A+ + LDP ++ YV L+N+YAA W V +VR +MKE V K YSWIEI + H
Sbjct: 487 ARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHE 546
Query: 556 FLGGDMSHPCIDKIHLELKRASVQMK 581
F D HP + IH +L +MK
Sbjct: 547 FRSSDRLHPELTSIHKKLNELDGKMK 572
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 204/394 (51%), Gaps = 42/394 (10%)
Query: 54 NAKISALSR-AGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
N +S ++ AGK+ A +LFD++ D +++N ++ Y ++ ++ + F MPVK+I
Sbjct: 108 NTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDI 167
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
SWN +I+G N ++ AFD F MPE+N +++AMISG+++HG LE A L++ + +
Sbjct: 168 ASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMK 227
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+V+ TAML G+MK G+V+ A + M+ KN+V+W MI GYV+N R + ++F M
Sbjct: 228 SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMI 287
Query: 233 D-------------------------------------YDKNVFVVTAMITGFCKVGMLE 255
+ K+ T++I+ +CK G L+
Sbjct: 288 ESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLD 347
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A LF + KD +++NAMI+GYAQ+G +AL LF M M+PD T V+V AC+
Sbjct: 348 SAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACN 407
Query: 316 ALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSW 373
++ G Q + + G EA VI + R G + ++ +++ +P+ +
Sbjct: 408 HAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIY 467
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
T++ A H + + L F+ L DP T
Sbjct: 468 GTLLGACRIHKNLD--LAEFAARNLLNLDPTSAT 499
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 87/159 (54%), Gaps = 8/159 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V V A ++ + GK+ A ++F +M K+++TWN++I GY +N ++ +F++M
Sbjct: 229 VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIE 288
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEE 161
N +S + ++ GC + + Q + + ++T ++IS + K G L+
Sbjct: 289 SRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDS 348
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
A +LF +MPR++VI++ AM+ G+ + G KA L D M
Sbjct: 349 AWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKM 387
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 50/270 (18%)
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ-NGVAEEALRL 291
D +V + I F + LE+AR +FE++ + V++N M++GY + G +EA L
Sbjct: 68 DTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHEL 127
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
F + +PD + N ++ Y R
Sbjct: 128 FDKI----PEPDSVSY-----------------------------------NIMLVCYLR 148
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G+ + F ++ ++ SWNT+I+ FAQ+G +KA FS M + +G+++ ++
Sbjct: 149 SYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP----EKNGVSWSAM 204
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+S G + + +L++ V + ++ T ++ + G++E A +I Q M +
Sbjct: 205 ISGYVEHGDLEAAEELYK-NVGMKSVVVE----TAMLTGYMKFGKVELAERIFQRMAVK- 258
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRE 501
+ W S++A V N E G K M E
Sbjct: 259 NLVTWNSMIAGYVENCRAEDGLKVFKTMIE 288
>gi|242092520|ref|XP_002436750.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
gi|241914973|gb|EER88117.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
Length = 672
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 200/570 (35%), Positives = 317/570 (55%), Gaps = 68/570 (11%)
Query: 54 NAKISALSRA---GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
N ++A +R+ ++AAR+LFD+M +D ++W+ ++ Y + G ++E++ LF MP +
Sbjct: 102 NTLLAAYARSLQPDHLAAARRLFDEMPQRDAVSWSTLLGAYTRRGLMEEAQRLFDEMPHR 161
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG------------- 157
N SWN M+ G ++ A + F+AMP +++A+ +AM+SGF+++G
Sbjct: 162 NPASWNTMVTGFFAIGQMRKALNVFEAMPVKDSASLSAMVSGFIRNGWLHEADELLTKRL 221
Query: 158 -----------------------RLEEATRLFEQMPR--------------RNVISYTAM 180
R+ +A RLF +P+ RNV+S+ +M
Sbjct: 222 RAMDMDKAVDAFNTLIAAYGQTGRVTDARRLFSMIPKTQSQHKGHKRRVFERNVVSWNSM 281
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
+ +++ G+V ARAL D M FK++V+W MI GY + EA +LF +P D +
Sbjct: 282 MMCYIRTGDVCSARALFDEMPFKDLVTWNTMIAGYTQASDMEEAEKLFGEVPAPDAVTWN 341
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
+ MI GF + G +E+AR F+R+ + +++N MI+GY QN + ++LF M+++
Sbjct: 342 L--MIRGFTQKGDVEHARGFFDRMPEQSTITWNTMISGYEQNEDYDCTIKLFQRMLEV-- 397
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
V AC++L +L G Q H L I F + + NA++TMYSRCG + ++
Sbjct: 398 ---------VLAACASLAMLRLGAQLHQL-IEKSFLPDTATNNALMTMYSRCGELTSAKA 447
Query: 361 AFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F Q+H+ +LVSWN +I + HG+ +AL F +M P ITF+SLLSACG+AG
Sbjct: 448 IFSQMHTQKDLVSWNALIGGYEHHGNATEALRLFQEMRSAKVMPTHITFISLLSACGNAG 507
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
V+E +F MV YG+ P EHY LV+++ R GQLE A ++ + MP D VWG+
Sbjct: 508 LVSEGQVVFHTMVHEYGLAPRVEHYAALVNLIGRHGQLEDALEVIKSMPIAPDRAVWGAF 567
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
L AC N L +AA + ++DP++SA YV++ NL+A G W + VR M+ G+
Sbjct: 568 LGACTAKKNEVLAAVAANALSKIDPESSAPYVLMHNLHAHEGRWGSASVVREDMERLGIH 627
Query: 540 KQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
K YSWI++ +KVH F+ GD SHP +I
Sbjct: 628 KHPGYSWIDLHDKVHVFISGDTSHPLTQEI 657
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 140/362 (38%), Gaps = 86/362 (23%)
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVV--------------------------- 206
V + L G +++G AR L D + ++VV
Sbjct: 36 VRQHNRSLMGLLRRGRFSAARRLFDALPARSVVTWNSFLAALSRRRDVRAARSFFDAMPM 95
Query: 207 ----SWTVMITGYVKN---ERFCEARELFYRMPDYD------------------------ 235
SW ++ Y ++ + AR LF MP D
Sbjct: 96 RDIISWNTLLAAYARSLQPDHLAAARRLFDEMPQRDAVSWSTLLGAYTRRGLMEEAQRLF 155
Query: 236 -----KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+N M+TGF +G + A +FE + KD S +AM++G+ +NG EA
Sbjct: 156 DEMPHRNPASWNTMVTGFFAIGQMRKALNVFEAMPVKDSASLSAMVSGFIRNGWLHEADE 215
Query: 291 LFSGMIK-MDM-QPDDA--TLVSVF-------TACSALQLLNEGRQSHVLVIRNGFEANV 339
L + ++ MDM + DA TL++ + A ++ + + H R FE NV
Sbjct: 216 LLTKRLRAMDMDKAVDAFNTLIAAYGQTGRVTDARRLFSMIPKTQSQHKGHKRRVFERNV 275
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
N+++ Y R G + + F ++ +LV+WNT+IA + Q E+A F ++
Sbjct: 276 VSWNSMMMCYIRTGDVCSARALFDEMPFKDLVTWNTMIAGYTQASDMEEAEKLFGEVPA- 334
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII--------PSSEHYTCLVDIL 451
PD +T+ ++ G V + F+ M + I +E Y C + +
Sbjct: 335 ---PDAVTWNLMIRGFTQKGDVEHARGFFDRMPEQSTITWNTMISGYEQNEDYDCTIKLF 391
Query: 452 SR 453
R
Sbjct: 392 QR 393
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 190/518 (36%), Positives = 311/518 (60%), Gaps = 34/518 (6%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N+ ++ L+++G++ A Q FD+M KD+ +WN ++ G+ + G L + + F + N++
Sbjct: 178 NSALAGLTQSGEMVRAVQFFDEMV-KDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVI 236
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SW ++ G RI DA D F MPERN +N M+ G++ +EEA +LF++MP +N
Sbjct: 237 SWVTLLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKN 296
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
IS+T ++ G + G++ +A+ L D MSF V + T ++ GY++ +AR +F M
Sbjct: 297 SISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEV 356
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF- 292
+D + MI+G+ + G+LE A LLF+R+ KD VS+N MIAGYAQ+G +A+ +F
Sbjct: 357 HDTVCW--NTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFR 414
Query: 293 --------------SGMIKMDM----------------QPDDATLVSVFTACSALQLLNE 322
SG ++ D + D +T S AC+ L +L+
Sbjct: 415 RMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHV 474
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GRQ H L++R+G + NA+I+ Y++CG IL+++ F ++ ++VSWN +I +A
Sbjct: 475 GRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYAS 534
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+G +A+ F +M NG PD +TF+ +LSAC HAG ++E + F M K Y + P +E
Sbjct: 535 NGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAE 594
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HY C+VD+L RAG+L +A+++ QGM + + GVWG+LL AC ++ N EL +LAA+++ EL
Sbjct: 595 HYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSEL 654
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
+P+ ++ YV+LSN+ A AG W + + R +KE+GV K
Sbjct: 655 EPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNK 692
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 248/518 (47%), Gaps = 95/518 (18%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F +N +++ L+R+G+++AAR+LFD M ++ +T+NA+++ ++G + E++ LF MP +
Sbjct: 19 FRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGR 78
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN---------------------------- 142
N VSWN MIA D+ R+ DA F MP R+
Sbjct: 79 NTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMP 138
Query: 143 ----TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD 198
TA YNAMISG+ K+GR ++A +L +MP +++S+ + L G + GE+ +A D
Sbjct: 139 GDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFD 198
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
M K++ SW +M+ G+V+ A F ++ NV ++ G+C+ G + +AR
Sbjct: 199 EM-VKDMTSWNLMLAGFVRTGDLNAASSFFAKIE--SPNVISWVTLLNGYCRAGRIADAR 255
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVSVFTACSAL 317
LF+R+ ++ V++N M+ GY EEA +LF M IK + T++S L
Sbjct: 256 DLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISW--TTIISGLARAGKL 313
Query: 318 Q-----------------------LLNEGRQSHVLVIRNGFEANVSVC-NAVITMYSRCG 353
Q L I +G E + +VC N +I+ Y +CG
Sbjct: 314 QEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTVCWNTMISGYVQCG 373
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG----------LNGF-- 401
+ ++ L F+++ + ++VSWNT+IA +AQ G KA+ F +M ++GF
Sbjct: 374 ILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQ 433
Query: 402 -------------------DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
D T+ S L AC + ++ L L+V+ G I S
Sbjct: 434 NDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHNLLVR-SGHINDSF 492
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
L+ ++ G++ +A QI M ++ D W +L+
Sbjct: 493 AGNALISTYAKCGRILEAKQIFDEMVYK-DIVSWNALI 529
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
N L+R F NA IS ++ G+I A+Q+FD+M KD+++WNA+I GY NG
Sbjct: 480 NLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGT 539
Query: 99 ESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERN-----TATYNAM 149
E+ +F+ M + V++ +++ C ID+ +F +M + Y M
Sbjct: 540 EAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACM 599
Query: 150 ISGFLKHGRLEEATRLFEQM 169
+ + G+L EA L + M
Sbjct: 600 VDLLGRAGKLNEAFELVQGM 619
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 214/627 (34%), Positives = 335/627 (53%), Gaps = 90/627 (14%)
Query: 43 RLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
R+ TQ+ +F+ N + A + G AR++FD+M ++ ++NA+++ + G L E
Sbjct: 44 RIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDE 103
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN----------------- 142
+ N+F+SMP + SWN M++G +DR ++A +F M +
Sbjct: 104 AFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAG 163
Query: 143 ---------------TATY-------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
+ Y +A++ + K G + A R F+ M RN++S+ ++
Sbjct: 164 LTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSL 223
Query: 181 LDGFMKKGEVDKARAL----------SDYMSFKNVVS----WTVMITG------------ 214
+ + + G KA + D ++ +VVS W+ + G
Sbjct: 224 ITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDK 283
Query: 215 --------------YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
Y K R EAR +F RMP +NV T+M+ G+ + ++ ARL+
Sbjct: 284 YRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL--RNVVSETSMVCGYARAASVKAARLM 341
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F + K+ VS+NA+IAGY QNG EEA+RLF + + + P T ++ AC+ L L
Sbjct: 342 FSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADL 401
Query: 321 NEGRQSHVLVIRNGF------EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
GRQ+H ++++GF E+++ V N++I MY +CG + D L F ++ ++VSWN
Sbjct: 402 KLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWN 461
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I +AQ+G+ AL F +M ++G PD +T + +LSAC HAG V E F M
Sbjct: 462 AMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTE 521
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
G+ P +H+TC+VD+L RAG L++A + Q MP + D VWGSLLAAC ++ N+ELG+
Sbjct: 522 LGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKY 581
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
A+K+ E+DP NS YV+LSN+YA G W+DV RVR M+++GV KQ SWIEI ++VH
Sbjct: 582 VAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVH 641
Query: 555 YFLGGDMSHPCIDKIHLELKRASVQMK 581
F+ D HP IHL LK + QMK
Sbjct: 642 VFMVKDKRHPLKKDIHLVLKFLTEQMK 668
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 45/215 (20%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG--------- 353
D + + +C + + R+ H +I+ F + + + N ++ Y +CG
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 354 ---------------------GILDSEL-AFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
G LD F+ + P+ SWN +++ FAQH +E+AL
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY------T 445
FF M F + +F S LSAC +N + ++++ +I S + +
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLN-------MGIQIHALISKSRYLLDVYMGS 190
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
LVD+ S+ G + A + GM + W SL+
Sbjct: 191 ALVDMYSKCGVVACAQRAFDGMAVR-NIVSWNSLI 224
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/583 (34%), Positives = 324/583 (55%), Gaps = 41/583 (7%)
Query: 42 IRLFSTQYVFV-----NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
I LF T+ + + +N +S R G+I AR LF++M++ V + +I GY G
Sbjct: 37 ICLFGTKKLSILTTPPSNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGR 96
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH 156
L+++ LF MPVK+++SWN M+ GC+ + A + F M ERN ++ +I+G L+
Sbjct: 97 LEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEF 156
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
GR+E A LF MP ++V ++ +M+ GF G V+ A L + M +NV+SWT +I G
Sbjct: 157 GRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLD 216
Query: 217 KNERFCEARELFYRM------------------------------------PDYDKNVFV 240
N R EA +F++M Y N ++
Sbjct: 217 HNGRSFEALVVFHKMLASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYI 276
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
++I+ + +++NA +F ++ V + A++ GY N +AL++F GM++M +
Sbjct: 277 SASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSV 336
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
P+ ++L S +C L+ ++ GR+ H + + G E+++ V N+++ MY++CG I D
Sbjct: 337 LPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIA 396
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++ N+VSWN+II AQHG AL F+QM DPD IT LLSACGH+G
Sbjct: 397 VFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGM 456
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + F+ K +GI ++EHY+ +VD+L R GQLE+A + MP +A+ VW +LL
Sbjct: 457 LTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALL 516
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
++ + + NV + E AAK + +L P SA Y +LSNLYA+ G W +V+++R MK++G+ K
Sbjct: 517 SSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILK 576
Query: 541 QCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
Q SWI I H F+ GD SHP KI+ +L+ ++K +
Sbjct: 577 QPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKEL 619
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 194/508 (38%), Positives = 291/508 (57%), Gaps = 3/508 (0%)
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND-RIDDAFD 133
+ +VI N +I Y + G + + +F+ M VK+ V+WN ++A + A
Sbjct: 35 EFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQ 94
Query: 134 YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
F+ +P+ NT +YN M++ H + +A F+ MP ++V S+ M+ + G + +A
Sbjct: 95 LFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEA 154
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
R L M KN VSW+ M++GYV A E FY P ++V TAMITG+ K G
Sbjct: 155 RRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPM--RSVITWTAMITGYMKFGR 212
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+E A LF+ + + V++NAMIAGY +NG AE+ LRLF M++ ++P+ +L SV
Sbjct: 213 VELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLG 272
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
CS L L G+Q H LV + ++ + ++++MYS+CG + D+ F QI ++V W
Sbjct: 273 CSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCW 332
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N +I+ +AQHG +KAL F +M G PD ITF+++L AC HAG V+ + F M +
Sbjct: 333 NAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRR 392
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+GI EHY C+VD+L RAG+L +A + + MPF+ ++G+LL AC I+ N+ L E
Sbjct: 393 DFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAE 452
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
AAK + ELDP + YV L+N+YAA W V +R MK+ V K YSWIEI + V
Sbjct: 453 FAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVV 512
Query: 554 HYFLGGDMSHPCIDKIHLELKRASVQMK 581
H F D HP + IH +LK +MK
Sbjct: 513 HGFRSSDRLHPELASIHEKLKDLEKKMK 540
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 197/390 (50%), Gaps = 42/390 (10%)
Query: 54 NAKISALSR-AGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
N+ ++A ++ G ARQLF+++ + +++N ++ +W + + +++ F SMP+K++
Sbjct: 76 NSILAAFAKKPGHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDV 135
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
SWN MI+ + +A F AMPE+N +++AM+SG++ G L+ A F P R
Sbjct: 136 ASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMR 195
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+VI++TAM+ G+MK G V+ A L MS + +V+W MI GYV+N R + LF M
Sbjct: 196 SVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTML 255
Query: 233 D--YDKNVFVVTAMITG-----------------------------------FCKVGMLE 255
+ N +T+++ G + K G L+
Sbjct: 256 ETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLK 315
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A LF +I KD V +NAMI+GYAQ+G ++ALRLF M K ++PD T V+V AC+
Sbjct: 316 DAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACN 375
Query: 316 ALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSW 373
L++ G Q + R+ G E ++ + R G + ++ +L P+ +
Sbjct: 376 HAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIY 435
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
T++ A H + L F+ L DP
Sbjct: 436 GTLLGACRIHKNLN--LAEFAAKNLLELDP 463
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI---- 112
+S S+ G + A +LF Q+ KDV+ WNA+I+GY Q+G +++ LF M + +
Sbjct: 305 VSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDW 364
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEATRLFE 167
+++ ++ C +D YF M E Y M+ + G+L EA L +
Sbjct: 365 ITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIK 424
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI-TGYVK 217
MP + + A+ + + K L+++ + KN++ I TGYV+
Sbjct: 425 SMPFK---PHPAIYGTLLGACRIHKNLNLAEFAA-KNLLELDPTIATGYVQ 471
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/517 (38%), Positives = 310/517 (59%), Gaps = 27/517 (5%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
+V N + ++ G I AR+LFD+M + V WN +I+GYW+ G +E+ LF M
Sbjct: 135 YVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQ 194
Query: 109 --VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+N+++W MI G + A YF MPER+ ++NAM+SG+ + G EE RLF
Sbjct: 195 EISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLF 254
Query: 167 EQM-------PRRN-----VISYTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMIT 213
M P + S +++ D + + V R L D + F+ N T ++
Sbjct: 255 NDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIV---RKLDDTVGFRPNYFVKTALLD 311
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVV-TAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ K A ++F ++ Y V AMI+ + +VG L +AR LF+++ +D VS+
Sbjct: 312 MHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSW 371
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
N+MIAGY QNG + +A++LF MI D +PD+ T+VSVF+AC L L G + ++
Sbjct: 372 NSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILK 431
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
N + ++SV N++I+MYSRCG + D+ L F+++ + +LVS+NT+I+ FA+HGH +++
Sbjct: 432 ENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIE 491
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
+M +G +PD IT++++L+AC HAG + E LFE + P +HY C++D+L
Sbjct: 492 LLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIK-----FPDVDHYACMIDML 546
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
RAG+LE+A ++ Q MP E G++GSLL A I+ VELGELAA K+ +++P NS YV
Sbjct: 547 GRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYV 606
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
+LSN+YA+AG W+D +VR M++QGV K SW+E
Sbjct: 607 LLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLE 643
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 168/375 (44%), Gaps = 87/375 (23%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+R+ N ++ + K+G +E A +LF++MP R V + M+ G+ K G ++A L
Sbjct: 131 DRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHV 190
Query: 200 MS----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
M +NV++WT MITG+ K AR F +MP +++V AM++
Sbjct: 191 MGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMP--ERSVVSWNAMLS--------- 239
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTAC 314
GYAQ G EE +RLF+ M+ ++QPD+ T V+V ++C
Sbjct: 240 ----------------------GYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSC 277
Query: 315 SAL--QLLNEGRQSHVLVIRN-----GFEANVSVCNAVITMYSRCGGILDSELAFRQI-- 365
S+L L+E ++R GF N V A++ M+++CG + + F Q+
Sbjct: 278 SSLGDPCLSES------IVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 331
Query: 366 --------------------------------HSPNLVSWNTIIAAFAQHGHYEKALIFF 393
+ VSWN++IA + Q+G KA+ F
Sbjct: 332 YKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLF 391
Query: 394 SQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
+M PD +T +S+ SACGH G++ + ++K I S Y L+ + S
Sbjct: 392 EEMISSEDSKPDEVTMVSVFSACGHLGELGLG-NWAVSILKENHIQISISVYNSLISMYS 450
Query: 453 RAGQLEKAWQITQGM 467
R G ++ A I Q M
Sbjct: 451 RCGSMQDAVLIFQEM 465
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 44/280 (15%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
YD++ +V ++ + K G +E AR LF+ + + +N MI+GY + G EEA LF
Sbjct: 130 YDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFH 189
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M G Q NV +IT +++ G
Sbjct: 190 VM---------------------------GDQE--------ISRNVITWTTMITGHAKKG 214
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFLSLL 412
+ + + F ++ ++VSWN +++ +AQ G E+ + F+ M G PD T+++++
Sbjct: 215 NLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVI 274
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP-FEA 471
S+C G S + + G P+ T L+D+ ++ G LE A +I + + ++
Sbjct: 275 SSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKY 334
Query: 472 DTGV-WGSLLAACVINLNVELGEL-AAKKMRELDPQNSAV 509
+ V W ++++A +G+L +A+ + + PQ V
Sbjct: 335 RSSVPWNAMISAY-----ARVGDLPSARHLFDKMPQRDTV 369
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V N+ IS SR G + A +F +M T+D++++N +I+G+ ++G ES L M
Sbjct: 439 ISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKE 498
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
I +++ ++ C + + F+++ + Y MI + GRLEEA +L
Sbjct: 499 DGIEPDRITYIAILTACSHAGLLGEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKL 558
Query: 166 FEQMP 170
+ MP
Sbjct: 559 IQSMP 563
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGV-AEEALRLFSGMIKM-DMQPDDATLVSVFTACSAL 317
+F D F M+ Y+Q GV A+ + LF M++ +++P+ T+ ++
Sbjct: 58 IFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPN--------TSFYSV 109
Query: 318 QLLNEGRQSHVL---VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ + G +S + V+++G++ + V N ++ +Y++ G I + F ++ + WN
Sbjct: 110 MMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWN 169
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+I+ + + G+ E+A F MG + IT+ ++++ GHA K N
Sbjct: 170 VMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMIT--GHAKKGN 215
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/573 (35%), Positives = 316/573 (55%), Gaps = 39/573 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
F + I+ R +I AR +FD+++ DV + +ITGY +N + LF MPV
Sbjct: 11 TFSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV 70
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K++VSWN MI GC D + A F MPER+ ++ MI+GFL+ G++E A LF +M
Sbjct: 71 KDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKM 130
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P R++ ++ +M+ G+ G V+ L M +NV+SWT MI G ++ R EA LF
Sbjct: 131 PFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFR 190
Query: 230 RMPD---------------------------------------YDKNVFVVTAMITGFCK 250
+M Y + ++ A+IT +
Sbjct: 191 QMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYAN 250
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+E++ +F + V + A++ GY N E+AL++F M++ + P+ ++ S
Sbjct: 251 CKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSA 310
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
+C L+ L+ GR+ H ++ G E +V V N++I MY RCG + D + F++I N+
Sbjct: 311 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNI 370
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
VSWN++I AQHG AL FF+QM + +PD ITF LLSAC H+G + LF+
Sbjct: 371 VSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKY 430
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
+ +HY C+VDIL R+G+LE+A ++ + MP +A++ VW LL+AC ++ +E
Sbjct: 431 FSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLE 490
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
+ E AAK + +L+P S+ YV+LSNLYA+A W DV+R+R MK++G+TKQ SWI I
Sbjct: 491 VAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIK 550
Query: 551 NKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+ FL GD SHP D+I+ +L+ ++K +
Sbjct: 551 GWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKEL 583
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 191/554 (34%), Positives = 314/554 (56%), Gaps = 37/554 (6%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
++ AR +FD++ + ++ + +I GY +N L ++ LF M V+++VSWN MI GC+D
Sbjct: 27 RLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLD 86
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+ A F MPE+N ++ M++G+LK GR+E A RLF M ++V ++ AM+ G+
Sbjct: 87 CGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGY 146
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDK-- 236
+ G V++ L + M ++V+SWT MI G N + EA +F +M P +
Sbjct: 147 FENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFA 206
Query: 237 -----------------------------NVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ F+ ++IT + +E+A +F K
Sbjct: 207 CVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTK 266
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ V + A++ Y N ++ALR+F M KM P+ +T AC L+ L++G++ H
Sbjct: 267 NVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIH 326
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ I+ G E +V V N+++ MY+ CG + + FR I+ ++VSWN+II AQHG
Sbjct: 327 TMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGL 386
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
ALIFF+QM G DP+ ITF LLSAC +G + + FE + + + +HY C+
Sbjct: 387 WALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACM 446
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
VDIL R G+L++A ++ + MP +A++ +W +LL+AC ++ N+E+ E AAK + +L+P S
Sbjct: 447 VDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCS 506
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
+ YV+LSN+YA+AG W DV+R+R+ MK+ G+ KQ SW+ + K H FL D SHP +
Sbjct: 507 SAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSE 566
Query: 568 KIHLELKRASVQMK 581
+I+ +L ++K
Sbjct: 567 RIYEKLDWLGKKLK 580
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 191/372 (51%), Gaps = 8/372 (2%)
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
+S+ +A + N R+D A F +P N Y MI+G+ ++ RL +A +LF++M R
Sbjct: 13 LSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR 72
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+V+S+ +M+ G + G + A L D M KNV+SWT M+ GY+K R A+ LF M
Sbjct: 73 DVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDM- 131
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+ K+V AM+ G+ + G +E LFE + +D +S+ +MI G NG +EEAL +F
Sbjct: 132 -HVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVF 190
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG--FEANVSVCNAVITMYS 350
M++ ++P +T V +AC+ N G Q H V++ G F +SV ++IT Y+
Sbjct: 191 KKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISV--SLITFYA 248
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
C I + F + + N+V W ++ A+ + ++ AL F M G P+ TF
Sbjct: 249 NCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSI 308
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
L AC +++ ++ + +K+ G+ LV + + G + A + + + E
Sbjct: 309 TLKACCGLEALDKGKEIHTMAIKL-GLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN-E 366
Query: 471 ADTGVWGSLLAA 482
D W S++
Sbjct: 367 KDIVSWNSIIVG 378
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 50/249 (20%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF------ 104
F++ + I+ + KI A ++F++ TK+V+ W A++T Y N Q++ +F
Sbjct: 238 FISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKM 297
Query: 105 ----------------------------QSMPVK-----NIVSWNCMIAGCIDNDRIDDA 131
+M +K ++ N ++ + ++ A
Sbjct: 298 GALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSA 357
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKK 187
F+ + E++ ++N++I G +HG A F QM RR V I++T +L +
Sbjct: 358 VAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRS 417
Query: 188 GEVDKARALSDYMS-FKNVV----SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
G + K R +Y+S +K+ V + M+ + + EA EL MP N +
Sbjct: 418 GMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMP-VKANSMIWL 476
Query: 243 AMITGFCKV 251
A+++ C+V
Sbjct: 477 ALLSA-CRV 484
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 33/179 (18%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+L VFV N+ + + G +++A +F + KD+++WN+II G Q+GF
Sbjct: 330 IKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGF----- 384
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ ++ +N MI +D + I T+ ++S + G L +
Sbjct: 385 ------GLWALIFFNQMIRRGVDPNEI----------------TFTGLLSACSRSGMLLK 422
Query: 162 ATRLFEQMPR--RNVI---SYTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMITG 214
FE + R NV+ Y M+D + G++D+A L YM K N + W +++
Sbjct: 423 GRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSA 481
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/561 (35%), Positives = 312/561 (55%), Gaps = 39/561 (6%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
R +I AR +FD+++ DV + +ITGY +N + LF MPVK++VSWN MI G
Sbjct: 7 RNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKG 66
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
C D + A F MPER+ ++ MI+GFL+ G++E A LF +MP R++ ++ +M+
Sbjct: 67 CFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMI 126
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD-------- 233
G+ G V+ L M +NV+SWT MI G ++ R EA LF +M
Sbjct: 127 YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPT 186
Query: 234 -------------------------------YDKNVFVVTAMITGFCKVGMLENARLLFE 262
Y + ++ A+IT + +E++ +F
Sbjct: 187 SSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFH 246
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ V + A++ GY N E+AL++F M++ + P+ ++ S +C L+ L+
Sbjct: 247 GKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDW 306
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GR+ H ++ G E +V V N++I MY RCG + D + F++I N+VSWN++I AQ
Sbjct: 307 GREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQ 366
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG AL FF+QM + +PD ITF LLSAC H+G + LF+ + +
Sbjct: 367 HGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLD 426
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HY C+VDIL R+G+LE+A ++ + MP +A++ VW LL+AC ++ +E+ E AAK + +L
Sbjct: 427 HYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDL 486
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P S+ YV+LSNLYA+A W DV+R+R MK++G+TKQ SWI I + FL GD S
Sbjct: 487 EPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRS 546
Query: 563 HPCIDKIHLELKRASVQMKSV 583
HP D+I+ +L+ ++K +
Sbjct: 547 HPSSDRIYQKLEWLGGKLKEL 567
>gi|224103137|ref|XP_002312939.1| predicted protein [Populus trichocarpa]
gi|222849347|gb|EEE86894.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 208/578 (35%), Positives = 309/578 (53%), Gaps = 84/578 (14%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQ-NG--FLQESKNLFQSMPVK 110
NA I A + +I+ AR+LFD+M +D+++WN +I+GY +G FL+E +NLF MP +
Sbjct: 32 NAIIRAYVKRREIAKARKLFDEMPQRDIVSWNLMISGYVSCHGIRFLKEGRNLFDRMPER 91
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+IVSWN MI+G N R+D+A F+ MPE + ++NA+++GFL++G + A FE+MP
Sbjct: 92 DIVSWNTMISGYAKNGRMDEALRMFKLMPEGDVVSWNAIVTGFLQNGDVARAIEYFERMP 151
Query: 171 RRNVISYTAMLDGFMKKGE-------------------------------------VDKA 193
R+ S +A++ G ++ GE VD+A
Sbjct: 152 ERDAASLSALVSGLIRNGELDEAARVVVRFERDGGRKENLLQAYNTLIAGYGRRDRVDEA 211
Query: 194 RALSDYMSF-------------KNVVSWTVMITGYVKNERFCEARELFYRMPDYD----- 235
R L D + F +NVVSW MI YVK ARELF +M + D
Sbjct: 212 RKLFDQIPFCDGKGKGGDGRFGRNVVSWNTMIMCYVKAGNIVFARELFDQMMERDTISWN 271
Query: 236 ------------------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
++F MI G ++G L+ LF R+ K+ VS
Sbjct: 272 TMISGYVNMLDMDEASRLFCEMPNPDIFSWNKMIAGHAQIGDLDRVNDLFGRMPQKNLVS 331
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N++I GY +N A+++F M +PD TL SV + + + L G Q H LV
Sbjct: 332 WNSVITGYEKNDDYIGAIKIFIQMQVEGEKPDRHTLSSVLSVSAGIVDLQLGMQIHQLVT 391
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKAL 390
+ +V + NA+ITMYSRCG I+++ F ++ ++SWN +I +A HG+ +AL
Sbjct: 392 KTVI-PDVPINNALITMYSRCGAIIEAGTIFDEVKLQKEVISWNAMIGGYASHGYAVEAL 450
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F M P ITF+S+L AC HAG V E ++FE M +GI PS EHY LVDI
Sbjct: 451 EVFKLMKSFDVRPTHITFISVLHACAHAGLVEEGREIFESMADEFGIEPSVEHYASLVDI 510
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
+SR GQLE+A + MPFE D VWG+LL+A ++ +E+ +AA+ + L+P +SA Y
Sbjct: 511 MSRHGQLEQALDLINSMPFEPDKAVWGALLSAAKVHNKIEVARVAAEALIRLEPDSSAPY 570
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
V+L N+YA G W VR++M+ + KQ AYSW++
Sbjct: 571 VLLYNMYADVGQWDSAAEVRIMMERSNIKKQAAYSWVD 608
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 125/293 (42%), Gaps = 39/293 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N I+ ++ G + LF +M K++++WN++ITGY +N + +F M V
Sbjct: 298 IFSWNKMIAGHAQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKNDDYIGAIKIFIQMQV 357
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE-EATRLFEQ 168
+ P+R+T + +S + +L + +L +
Sbjct: 358 EG-------------------------EKPDRHTLSSVLSVSAGIVDLQLGMQIHQLVTK 392
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV-SWTVMITGYVKNERFCEAREL 227
+V A++ + + G + +A + D + + V SW MI GY + EA E+
Sbjct: 393 TVIPDVPINNALITMYSRCGAIIEAGTIFDEVKLQKEVISWNAMIGGYASHGYAVEALEV 452
Query: 228 FYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFER------IQPKDCVSFNAMIAGY 279
F M +D +T +++ G++E R +FE I+P + +++
Sbjct: 453 FKLMKSFDVRPTHITFISVLHACAHAGLVEEGREIFESMADEFGIEPS-VEHYASLVDIM 511
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
+++G E+AL L + M +PD A ++ +A + R + +IR
Sbjct: 512 SRHGQLEQALDLINS---MPFEPDKAVWGALLSAAKVHNKIEVARVAAEALIR 561
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/587 (33%), Positives = 336/587 (57%), Gaps = 25/587 (4%)
Query: 14 RILFPPILRILSTPDSCG-NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQL 72
RI + +L S P + T HS ++ + V A + ++ G RQ+
Sbjct: 345 RITYINVLNAFSGPAALKWGKTVHSH--ILNAGHESDLAVGTALVKMYAKCGSYKDCRQV 402
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAGCIDNDRI 128
F+++ +D+I WN +I G + G +E+ ++ M + N +++ ++ C++
Sbjct: 403 FEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVN---- 458
Query: 129 DDAFDYFQAMPER--------NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
A + + + R + + NA+IS + + G +++A LF +M R+++IS+TAM
Sbjct: 459 PTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAM 518
Query: 181 LDGFMKKGEVDKARALSDYMS----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYD- 235
+ G K G +A A+ M N V++T ++ R + ++ +
Sbjct: 519 IGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGL 578
Query: 236 -KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ V ++ + G +++AR +F+R+ +D V++NAMI GYA + + +EAL+LF
Sbjct: 579 ATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDR 638
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ + ++PD T +++ AC+ L ++ H LV+++G+ ++ S+ NA+++ Y++CG
Sbjct: 639 LQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGS 698
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
D+ L F ++ N++SWN II AQHG + L F +M + G PD +TF+SLLSA
Sbjct: 699 FSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSA 758
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C HAG + E F M + +GI P+ EHY C+VD+L RAGQL++ + + MPF+A+T
Sbjct: 759 CSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTR 818
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+WG+LL AC I+ NV + E AA+ +LDP N+AVYV LS++YAAAGMW ++R LM+
Sbjct: 819 IWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLME 878
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
++GVTK+ SWIE+G+K+HYF+ D SHP +KI+ EL + + MK
Sbjct: 879 QRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMK 925
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 229/499 (45%), Gaps = 50/499 (10%)
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--PVKNIVSWNCMIAGCIDNDRI 128
+ T D T NA+I Y Q G ++E++ ++ + + + SWN M+ G + I
Sbjct: 166 HIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYI 225
Query: 129 DDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL-----FEQMPRR---NVISYTAM 180
++A + M + A A L + A E M R +V +
Sbjct: 226 EEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCI 285
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD- 233
L+ + K G + +AR + D M K+VVSWT++I GY A E+F +M P+
Sbjct: 286 LNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNR 345
Query: 234 ------------------------------YDKNVFVVTAMITGFCKVGMLENARLLFER 263
++ ++ V TA++ + K G ++ R +FE+
Sbjct: 346 ITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEK 405
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ +D +++N MI G A+ G EEA ++ M + M P+ T V + AC L+ G
Sbjct: 406 LVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWG 465
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
R+ H V+++GF ++SV NA+I+MY+RCG I D+ L F ++ +++SW +I A+
Sbjct: 466 REIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKS 525
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +AL F M G P+ +T+ S+L+AC ++ + + +++ G+ +
Sbjct: 526 GLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA-GLATDAHV 584
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA-CVINLNVELGELAAKKMREL 502
LV++ S G ++ A Q+ M + D + +++ NL E +L + E
Sbjct: 585 ANTLVNMYSMCGSVKDARQVFDRMT-QRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEG 643
Query: 503 DPQNSAVYVMLSNLYAAAG 521
+ Y+ + N A +G
Sbjct: 644 LKPDKVTYINMLNACANSG 662
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 3/156 (1%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLV- 371
C ++ L GR+ H +I++ + NA+I MY +CG I ++ + ++ H+ V
Sbjct: 151 CIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVH 210
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SWN ++ + Q+G+ E+AL +M +G T + LLS+C + ++
Sbjct: 211 SWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEA 270
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+K ++ C++++ ++ G + +A ++ M
Sbjct: 271 MKAR-LLFDVNVANCILNMYAKCGSIHEAREVFDKM 305
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 335/584 (57%), Gaps = 19/584 (3%)
Query: 14 RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLF 73
RI + +L S+P + + + ++ V A + ++ G RQ+F
Sbjct: 227 RITYISVLNAFSSPAAL-KWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVF 285
Query: 74 DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAGCIDNDRID 129
+++ +D+I WN +I G + G+ +E+ ++ M + N +++ ++ C+++ +
Sbjct: 286 EKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALH 345
Query: 130 DAFDYFQAMPE----RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
+ + + + NA+IS + + G +++A +F++M R++VIS+TAM+ G
Sbjct: 346 WGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLA 405
Query: 186 KKGEVDKARALSDYMSFK------NVVSWTVMITGYVKNERFCEARELFYRMPDYD--KN 237
K G A AL+ Y + N V++T ++ R + ++ + +
Sbjct: 406 KSGF--GAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATD 463
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
V ++ + G +++AR +F+R+ +D V++NAMI GYA + + +EAL+LF + +
Sbjct: 464 AHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 523
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
++PD T +++ AC+ L R+ H LV + GF ++ SV NA+++ Y++CG D
Sbjct: 524 EGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSD 583
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ + F ++ N++SWN II AQHG + AL F +M + G PD +TF+SLLSAC H
Sbjct: 584 ASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSH 643
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
AG + E F M + + IIP+ EHY C+VD+L RAGQL++A + + MPF+A+T +WG
Sbjct: 644 AGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWG 703
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+LL AC I+ NV + E AA+ +LD N+ VYV LS++YAAAGMW ++R LM+++G
Sbjct: 704 ALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRG 763
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
VTK+ SWI++G+K+HYF+ D SHP +KI+ EL R + MK
Sbjct: 764 VTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMK 807
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 128/533 (24%), Positives = 255/533 (47%), Gaps = 21/533 (3%)
Query: 22 RILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT--TK 79
R + D H R QY NA I+ + G I ARQ++ +++ +
Sbjct: 32 RCIEVKDLVAGRQVHQHIIQHRTVPDQYTV--NALINMYIQCGSIEEARQVWKKLSYMER 89
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFD-----Y 134
V +WNA++ GY Q G+++++ L + M + I + + + A + +
Sbjct: 90 TVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIH 149
Query: 135 FQAMPER---NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
FQAM + N +++ + K G +EEA +F++M +++V+S+T + G+ G +
Sbjct: 150 FQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSE 209
Query: 192 KARALSDYMSFKNVV----SWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMI 245
A + M + VV ++ ++ + + + R+ ++ + V TA++
Sbjct: 210 TAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALV 269
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K G ++ R +FE++ +D +++N MI G A+ G EEA +++ M + + P+
Sbjct: 270 KMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKI 329
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T V + AC L+ G++ H V + GF +++ V NA+I+MYSRCG I D+ L F ++
Sbjct: 330 TYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKM 389
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+++SW +I A+ G +AL + +M G +P+ +T+ S+L+AC +
Sbjct: 390 VRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGR 449
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA-CV 484
+ + +V+ G+ + LV++ S G ++ A Q+ M + D + +++
Sbjct: 450 RIHQQVVEA-GLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAA 507
Query: 485 INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
NL E +L + E + Y+ + N A +G + L+++ G
Sbjct: 508 HNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGG 560
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
Q + + + + C ++ L GRQ H +I++ + NA+I MY +CG I ++
Sbjct: 20 QVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQ 79
Query: 361 AFRQIH--SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
++++ + SWN ++ + Q+G+ EKAL QM +G PD T +S LS+C
Sbjct: 80 VWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSP 139
Query: 419 GKVNESMDL-FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
G + ++ F+ M G++ + C++++ ++ G +E+A ++ M
Sbjct: 140 GALEWGREIHFQAMQA--GLLFDVKVANCILNMYAKCGSIEEAREVFDKM 187
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 332/619 (53%), Gaps = 80/619 (12%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+ F+ N IS+ ++ G I A ++FDQM ++ +WN I++ Y + G + E
Sbjct: 35 IIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEM 94
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN------------- 147
+ LF +MP ++ VSWN +I+G I + + M +N ++N
Sbjct: 95 EYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML-KNDGSFNLNRITFSTLLILA 153
Query: 148 -----------------------------AMISGFLKHGRLEEATRLFEQMPRRNVISYT 178
++ + K G + A ++F+++P +NV+ Y
Sbjct: 154 SKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYN 213
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------ 232
++ G M+ G V+ ++ L M ++ +SWT MITG+ +N +A ++F M
Sbjct: 214 TLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQM 273
Query: 233 -------------------------------DYDKNVFVVTAMITGFCKVGMLENARLLF 261
DY N+FV +A++ +CK +++A +F
Sbjct: 274 DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVF 333
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+++ K+ VS+ AM+ GY QNG +EEA++ FS M K ++PDD TL SV ++C+ L L
Sbjct: 334 KKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLE 393
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
EG Q H + +G + ++V NA++T+Y +CG I DS F +I + V+W +++ +A
Sbjct: 394 EGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYA 453
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
Q G + + F M +G PD +TF+ +LSAC AG V + +FE M+ +GI+P
Sbjct: 454 QFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQ 513
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
+HYTC++D+ SRAG++E+A MPF D W +LL++C N+++G+ AA+ + E
Sbjct: 514 DHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLME 573
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
LDP N+A YV+LS++YAA G W +V R+R M+++G+ K+ SWI+ N+VH F D
Sbjct: 574 LDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDK 633
Query: 562 SHPCIDKIHLELKRASVQM 580
S+P D+I+ EL++ + +M
Sbjct: 634 SNPFSDQIYSELEKLNYKM 652
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 202/422 (47%), Gaps = 45/422 (10%)
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
++ +++P N +I+ I A F MP N ++N ++S + K GR+ E
Sbjct: 34 HIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSE 93
Query: 162 ATRLFEQMPRRNVISYTAMLDGFM------------------------------------ 185
LF+ MPRR+ +S+ +++ G+
Sbjct: 94 MEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILA 153
Query: 186 -KKGEVDKARALSDYMSFKNVVSW----TVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
K+G V R + ++ +S+ + ++ Y K AR++F +P +KNV +
Sbjct: 154 SKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELP--EKNVVM 211
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
+I G + G +E+++ LF ++ +D +S+ +MI G+ QNG+ +A+ +F M ++
Sbjct: 212 YNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENL 271
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
Q D T SV TAC + L EG+Q H +IR ++ N+ V +A++ MY +C I +E
Sbjct: 272 QMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEA 331
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F+++ N+VSW ++ + Q+G+ E+A+ FS M G +PD T S++S+C +
Sbjct: 332 VFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLAS 391
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ E F G+I LV + + G +E + ++ + F+ D W +L+
Sbjct: 392 LEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALV 449
Query: 481 AA 482
+
Sbjct: 450 SG 451
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 122/305 (40%), Gaps = 66/305 (21%)
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+ + + +P ++ + K G + A + D M N+ SW +++ Y K R
Sbjct: 33 SHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVS 92
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
E LF MP +D VS+N++I+GYA
Sbjct: 93 EMEYLFDAMPR---------------------------------RDGVSWNSLISGYAGC 119
Query: 283 GVAEEALRLFSGMIKMD--MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
G+ ++++ ++ M+K D + T ++ S + GRQ H V++ GF + V
Sbjct: 120 GLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVF 179
Query: 341 VCNAVITMYS-------------------------------RCGGILDSELAFRQIHSPN 369
V + ++ MYS RCG + DS+ F ++ +
Sbjct: 180 VGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERD 239
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+SW ++I F Q+G A+ F +M L D TF S+L+ACG + E +
Sbjct: 240 SISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHA 299
Query: 430 LMVKV 434
+++
Sbjct: 300 YIIRT 304
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 123/276 (44%), Gaps = 20/276 (7%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
++ C + + H +I+ + N +I+ Y++ G I + F Q+ P
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
NL SWNTI++A+++ G + F M DG+++ SL+S G + +S+ +
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRR----DGVSWNSLISGYAGCGLIYQSVKAY 129
Query: 429 ELMVKVYGIIPSSE-HYTCLVDILSRAGQLEKAWQI-TQGMPFEADTGVWGSLLAACVIN 486
LM+K G + ++ L+ + S+ G ++ QI + F + V+ + + +++
Sbjct: 130 NLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVF---VGSPLVD 186
Query: 487 LNVELGEL--AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAY 544
+ ++G + A K EL +N +Y L G D R+ M+E+ +
Sbjct: 187 MYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERD-----SI 241
Query: 545 SWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
SW + + F + ID I E+K ++QM
Sbjct: 242 SWTSM---ITGFTQNGLDRDAID-IFREMKLENLQM 273
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 218/630 (34%), Positives = 334/630 (53%), Gaps = 84/630 (13%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
FS + VF+ N I A ++ G + RQLFD+M ++V TWN+++TG + GFL E+ +LF
Sbjct: 51 FSNE-VFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLF 109
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMI---SGFLKHG 157
+SMP ++ +WN M++G +DR ++A YF M + N T+ + + SG
Sbjct: 110 RSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMN 169
Query: 158 RLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
R + L + P +V +A++D + K G V+ A+ + D M +NVVSW +IT Y
Sbjct: 170 RGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYE 229
Query: 217 KNERFCEARELFYRM------PD-----------------------------YDK---NV 238
+N EA ++F M PD DK ++
Sbjct: 230 QNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDI 289
Query: 239 FVVTAMITGFCKVGMLENARLLFE-------------------------------RIQPK 267
+ A + + K ++ AR +F+ ++ +
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAER 349
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ VS+NA+IAGY QNG EEAL LF + + + P T ++ AC+ L L+ G Q+H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAH 409
Query: 328 VLVIRNGF------EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
V V+++GF E ++ V N++I MY +CG + + L FR++ + VSWN +I FA
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
Q+G+ +AL F +M +G PD IT + +LSACGHAG V E F M + +G+ P
Sbjct: 470 QNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
+HYTC+VD+L RAG LE+A I + MP + D+ +WGSLLAAC ++ N+ LG+ A+K+ E
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFE 589
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
++ NS YV+LSN+YA G W D VR LM+++GVTKQ SWI+I H F+ D
Sbjct: 590 VETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDK 649
Query: 562 SHPCIDKIHLELKRASVQMKSVDDFVEIAT 591
SHP +IH L +M+ D E +
Sbjct: 650 SHPRKKQIHSLLDILIAEMRQKQDHAETGS 679
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 37/190 (19%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCG------------------------------ 353
R H VI++GF V + N +I Y++CG
Sbjct: 40 RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99
Query: 354 GILD-SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G LD ++ FR + + +WN++++ FAQH E+AL +F+ M GF + TF S L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGL 159
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHY--TCLVDILSRAGQLEKAWQITQGMPFE 470
SAC +N + + L+ K + S+ Y + LVD+ S+ G + A Q+ M +
Sbjct: 160 SACSGLNDMNRGVQIHSLIAKSPCL---SDVYIGSALVDMYSKCGNVNDAQQVFDEMG-D 215
Query: 471 ADTGVWGSLL 480
+ W SL+
Sbjct: 216 RNVVSWNSLI 225
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 210/584 (35%), Positives = 324/584 (55%), Gaps = 21/584 (3%)
Query: 18 PPILRILSTPDSCGNFTPHSS------NCLIRLFSTQYVFVNNAKISALSRAGKISAARQ 71
P L LS +CG+ + + + + R F + V V A S ++ G + ARQ
Sbjct: 118 PDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESD-VIVGTALASMYTKCGSLENARQ 176
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI-------VSWNCMIAGCID 124
+FD+M +DV++WNAII GY QNG E+ LF M V I VS + A +
Sbjct: 177 VFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLA 236
Query: 125 NDRIDDAFDY-FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
++ Y ++ E + N +++ + K G + A +LFE+MP R+V S+ A++ G
Sbjct: 237 LEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGG 296
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY------DKN 237
+ + +A A + M + + ++ + + A E ++ Y + N
Sbjct: 297 YSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESN 356
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
V A++ + K G + +A LFER+ K+ V++NA+I+GY+Q+G EAL LF M
Sbjct: 357 DVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQA 416
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
++PD +VSV AC+ L +G+Q H IR+GFE+NV V ++ +Y++CG +
Sbjct: 417 QGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNT 476
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
++ F ++ ++VSW T+I A+ HGH E AL FS+M G D I F ++L+AC H
Sbjct: 477 AQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSH 536
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
AG V++ + F+ M YG+ P EHY CLVD+L RAG L++A I + M E D VWG
Sbjct: 537 AGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWG 596
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+LL AC I+ N+ELGE AAK + ELDP N+ YV+LSN+YA A W DV ++R +MKE+G
Sbjct: 597 ALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKG 656
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
V KQ S + + V FL GD +HP ++I+ L+ QM+
Sbjct: 657 VKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMR 700
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 229/470 (48%), Gaps = 25/470 (5%)
Query: 55 AKISALSRAGKISAARQLF-----DQMTTKDV----ITWNAIITGYWQNGFLQESKNLFQ 105
+ + A R K+ R++ Q T D+ + W I GY +NGF ++ L+
Sbjct: 50 STVVAQLRRNKVKTTREVSACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYY 109
Query: 106 SMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHG 157
M I + + +I C + + + R + A+ S + K G
Sbjct: 110 QMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCG 169
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
LE A ++F++MP+R+V+S+ A++ G+ + G+ +A AL M + + + +
Sbjct: 170 SLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMP 229
Query: 218 NERFCEARELFYRMPDY------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
A E ++ Y + +V VV ++ + K G + A LFER+ +D S
Sbjct: 230 VCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVAS 289
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+NA+I GY+ N EAL F+ M ++P+ T+VSV AC+ L L +G+Q H I
Sbjct: 290 WNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAI 349
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
R+GFE+N V NA++ MY++CG + + F ++ N+V+WN II+ ++QHGH +AL
Sbjct: 350 RSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALA 409
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F +M G PD +S+L AC H + + + ++ G + T LVDI
Sbjct: 410 LFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRS-GFESNVVVGTGLVDIY 468
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
++ G + A ++ + MP E D W +++ A I+ + E KM+E
Sbjct: 469 AKCGNVNTAQKLFERMP-EQDVVSWTTMILAYGIHGHGEDALALFSKMQE 517
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 216/645 (33%), Positives = 339/645 (52%), Gaps = 113/645 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V + + + + ++FD+M K+V++W +++ GY QNG +++ LF M +
Sbjct: 127 VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQL 186
Query: 110 KNI----VSWNCMIAGCIDNDRID-----------------------------------D 130
+ I ++ ++ G + ++ D
Sbjct: 187 EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSD 246
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV---------------- 174
A F +M RN ++N+MI+GF+ +G EA LF +M V
Sbjct: 247 AKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN 306
Query: 175 ---ISY--------------------TAMLDGFMKKGEVDKARALSDYM-SFKNVVSWTV 210
+S+ TA++ + K E+D A L M +NVVSWT
Sbjct: 307 IKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTA 366
Query: 211 MITGYVKNERFCEARELFYRM---------------------------------PDYDKN 237
+I+GYV+N R A LF +M +Y+ +
Sbjct: 367 IISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKTNYENS 426
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
V TA+ + K+G A +FE I KD V+++AM++GYAQ G E A+++F + K
Sbjct: 427 PSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAK 486
Query: 298 MDMQPDDATLVSVFTACSA-LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
++P++ T SV AC+A + +G+Q H I++GF + V +A++TMY++ G I
Sbjct: 487 EGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIE 546
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F++ +LVSWN++I+ +AQHG +K+L F +M + DGITF+ ++SAC
Sbjct: 547 SANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACT 606
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
HAG VNE F+LMVK Y I+P+ EHY+C+VD+ SRAG LEKA + MPF A +W
Sbjct: 607 HAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIW 666
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
+LLAAC ++LNV+LGELAA+K+ L PQ+SA YV+LSN+YA AG W++ +VR LM +
Sbjct: 667 RTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMK 726
Query: 537 GVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
V K+ YSWIE+ NK F+ GD+SHP D+I+L+L+ S+++K
Sbjct: 727 KVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLK 771
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 221/432 (51%), Gaps = 27/432 (6%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF----QSMPVKNIVSWNCM--IAGC 122
++QLFD+ + + N ++ + +N +E+ NLF +S + S +C+ + GC
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 123 IDNDRIDDAFDYFQAMP---ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
+ DRI + Q + + + +++ ++K +E+ R+F++M +NV+S+T+
Sbjct: 105 L-FDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 180 MLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKN---ERFCEARELFYRMP 232
+L G+ + G ++A L M + N ++ ++ G + E+ + + +
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK-S 222
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
D +FV +M+ + K M+ +A+ +F+ ++ ++ VS+N+MIAG+ NG+ EA LF
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF 282
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M ++ +V C+ ++ ++ +Q H VI+NG + ++++ A++ YS+C
Sbjct: 283 YRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKC 342
Query: 353 GGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
I D+ F +H N+VSW II+ + Q+G ++A+ F QM G P+ T+ ++
Sbjct: 343 SEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTI 402
Query: 412 LSACGHAGKVNESMDLFELMVKV-YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
L+A V+ S + L+VK Y PS T L D S+ G +A +I + + E
Sbjct: 403 LTA---NAAVSPS-QIHALVVKTNYENSPSVG--TALSDSYSKIGDANEAAKIFE-LIDE 455
Query: 471 ADTGVWGSLLAA 482
D W ++L+
Sbjct: 456 KDIVAWSAMLSG 467
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+++ LF+ + N ++ +++N +EAL LF G+ + D ++L V C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L G+Q H I+ GF +VSV +++ MY + + D E F ++ N+VSW +
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
++A + Q+G E+AL FSQM L G P+ TF ++L G V + + + +++K
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK-S 222
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGEL 494
G+ + +V++ S++ + A + M + W S++A V N L++E EL
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGFVTNGLDLEAFEL 281
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQM 76
F +L + P + +C I+ + + V++A ++ ++ G I +A ++F +
Sbjct: 496 FSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ 555
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAF 132
+D+++WN++I+GY Q+G ++S +F+ M KN+ +++ +I+ C +++
Sbjct: 556 VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQ 615
Query: 133 DYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMP 170
YF M + Y+ M+ + + G LE+A L +MP
Sbjct: 616 RYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMP 658
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/465 (40%), Positives = 279/465 (60%), Gaps = 3/465 (0%)
Query: 107 MPVKNIVSWNCMIAG-CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
M +K V+WN ++AG ++ +A + F +PE + +YN M+S ++++ +E A
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAF 60
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
FE MP ++ S+ M+ GF + ++DKAR L M KNVV+W MI+GYV+ A
Sbjct: 61 FEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSAL 120
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+LF + P K+V TAMITG+ K+G + A LFE++ K+ V++NAMIAGY +N A
Sbjct: 121 KLFEKAPF--KSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRA 178
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
E+ ++LF M+ +QP+ +TL S CS L L GRQ H LV ++ + + ++
Sbjct: 179 EDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSL 238
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I+MY +CG + D F Q+ ++V+WN +I+ +AQHG +KAL F +M G PD
Sbjct: 239 ISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDW 298
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
ITF+++L AC HAG + + F M K YG++ +HYTC+VD+L RAG+L +A + +
Sbjct: 299 ITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIE 358
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
MPF+ V+G+LL AC I+ N E+ E A++K+ LDP ++ YV L+N+YAA W
Sbjct: 359 KMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDH 418
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V RVR MK V K YSWIE+ + H F GD HP + IH
Sbjct: 419 VARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIH 463
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 209/394 (53%), Gaps = 42/394 (10%)
Query: 54 NAKISALSRA-GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
N+ ++ +S+ GK+ A++LF ++ D +++N +++ Y +N ++ ++ F+ MP+K+
Sbjct: 10 NSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDT 69
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
SWN MI G N ++D A D F MP +N T+NAMISG+++ G L+ A +LFE+ P +
Sbjct: 70 PSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFK 129
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+V+++TAM+ G+MK G + A L + M KN+V+W MI GY++N R + +LF M
Sbjct: 130 SVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMV 189
Query: 233 DYD-------------------------------------KNVFVVTAMITGFCKVGMLE 255
+ + T++I+ +CK G+LE
Sbjct: 190 GFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLE 249
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+ LF ++ +D V++NAMI+GYAQ+G ++AL LF MI+ M+PD T V+V AC+
Sbjct: 250 DGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACN 309
Query: 316 ALQLLNEG-RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSW 373
+ G + H + G A ++ + R G ++++ +L + P+ +
Sbjct: 310 HAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVF 369
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
T++ A H + E A F SQ LN DP T
Sbjct: 370 GTLLGACRIHKNTEMAE-FASQKLLN-LDPASAT 401
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 39/199 (19%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L + T+ V NA IS G + +A +LF++ K V+ W A+ITGY + G + +
Sbjct: 91 LFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLA 150
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PER------------- 141
+ LF+ MP KN+V+WN MIAG I+N R +D F+ M P
Sbjct: 151 ERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSEL 210
Query: 142 --------------------NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
+T ++IS + K G LE+ +LF Q+PRR+V+++ AM+
Sbjct: 211 SALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMI 270
Query: 182 DGFMKKGEVDKARALSDYM 200
G+ + GE KA L D M
Sbjct: 271 SGYAQHGEGKKALGLFDEM 289
>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
Length = 841
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/495 (35%), Positives = 299/495 (60%), Gaps = 5/495 (1%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + RAG + A F ++ + +VI+W ++ GY Q G + E++ LF MP +N+V
Sbjct: 202 NLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVV 261
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+WN +++G + +++ A++ F MPE+N+ ++ M+SGF++ G+L+EA + +MP N
Sbjct: 262 AWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDN 321
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V + TA++ G++K +D AR L D + ++ V W MI+GYV+ EA LF +MP+
Sbjct: 322 VGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPN 381
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
K++ MI G + G + A +F +++ ++ VS+N++I+G+ QNG+ EAL+ F
Sbjct: 382 --KDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFM 439
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + D T +A + L L GRQ H L++R GF ++ S NA+I+ Y++CG
Sbjct: 440 LMRRDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCG 499
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+L++ F ++ ++VSWN +I +A +G+ + + F +M N PD IT + +LS
Sbjct: 500 RMLEARQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLS 559
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC HAG ++E + F M+K+Y + P +EHYTC+VD+L RAG+L +A+++ QGM + +
Sbjct: 560 ACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNA 619
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
GVWG+LL AC ++ N E+ LAA+K+ EL+P ++ YV+LSN+ AG W D +
Sbjct: 620 GVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLLSNICVEAGKWDDADKC---Y 676
Query: 534 KEQGVTKQCAYSWIE 548
+ C + W E
Sbjct: 677 GASWKPRHCLWKWQE 691
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 219/421 (52%), Gaps = 46/421 (10%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+ VF +N ++++L+R+G+++AAR+LF++M ++V+++NA+++ +G L E++ LF
Sbjct: 6 LTASAVFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLF 65
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN---------------------- 142
MP +N VSWN M+ C + R++DA F AMP RN
Sbjct: 66 DEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARE 125
Query: 143 ----------TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
A YN MISG+ K+GR E+A L ++MP +++S+ ++L G ++ E+ +
Sbjct: 126 LLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISR 185
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
+ D M K++VSW +M+ GYV+ A F R+P NV ++ G+C+ G
Sbjct: 186 SVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIP--SPNVISWVNLVNGYCQAG 243
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ AR LF+R+ ++ V++N +++GY Q E A LF M + + T+VS F
Sbjct: 244 RMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKN-SISWTTMVSGFV 302
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
LQ + V+ NV A++ Y + I D+ F I + V
Sbjct: 303 RSGKLQEAKD-------VLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVC 355
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WNT+I+ + Q G ++A++ F QM + D I++ ++++ C G++ ++ +F M
Sbjct: 356 WNTMISGYVQCGMLDEAMVLFQQMP----NKDMISWNTMIAGCAQGGQIRKAASIFRKMK 411
Query: 433 K 433
+
Sbjct: 412 R 412
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 233/433 (53%), Gaps = 13/433 (3%)
Query: 57 ISALSRAGKISAARQLFDQMT-TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
+S RAG+++ AR+L D+M K +N +I+GY +NG +++ L Q MP +IVSW
Sbjct: 111 VSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSW 170
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
N ++ G I N+ I + +F MP+++ ++N M+ G+++ G L+ A+ F ++P NVI
Sbjct: 171 NSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVI 230
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
S+ +++G+ + G + +AR L D M +NVV+W V+++GYV+ + A LF MP +
Sbjct: 231 SWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMP--E 288
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
KN T M++GF + G L+ A+ + ++ + + A++ GY ++ + ++A +LF G+
Sbjct: 289 KNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGI 348
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ D + T++S + C +L+E +++ + ++ N +I ++ G I
Sbjct: 349 VVRDAVCWN-TMISGYVQCG---MLDEA----MVLFQQMPNKDMISWNTMIAGCAQGGQI 400
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ FR++ N VSWN+II+ F Q+G + +AL F M + D T+ LSA
Sbjct: 401 RKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSAS 460
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ + L+V+ G I S L+ ++ G++ +A Q+ M + D
Sbjct: 461 ANLATLQIGRQFHSLLVRT-GFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQ-DIVS 518
Query: 476 WGSLLAACVINLN 488
W +L+ N N
Sbjct: 519 WNALIDGYASNGN 531
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 197/545 (36%), Positives = 311/545 (57%), Gaps = 14/545 (2%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
+ LF + F++N + ++ GK+S A+ +FD MT +DV +WN +++ Y + G ++
Sbjct: 50 LNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLH 109
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN-TATYNAMISGF------- 153
+F MP ++ VS+N +IA N A M E T + ++
Sbjct: 110 VVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLL 169
Query: 154 -LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
L+HG+ + R+ N AM D + K G++DKAR L D M KNVVSW +MI
Sbjct: 170 DLRHGK-QIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMI 228
Query: 213 TGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+GYVK E LF M ++ V+ ++ + + G +++AR LF ++ KD +
Sbjct: 229 SGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEI 288
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+ MI GYAQNG E+A LF M++ +++PD T+ S+ ++C+ L L G+ H V
Sbjct: 289 CWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKV 348
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+ G + ++ V +A++ MY +CG LD+ + F + N+++WN +I +AQ+G +AL
Sbjct: 349 VVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEAL 408
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
+ +M F PD ITF+ +LSAC +A V E F+ + +GI P+ +HY C++ +
Sbjct: 409 TLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFD-SISEHGIAPTLDHYACMITL 467
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L R+G ++KA + QGMP E + +W +LL+ C +++ ELAA + ELDP+N+ Y
Sbjct: 468 LGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKG-DLKNAELAASHLFELDPRNAGPY 526
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
+MLSNLYAA G W+DV VR LMKE+ K AYSW+E+GNKVH F+ D HP + KI+
Sbjct: 527 IMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIY 586
Query: 571 LELKR 575
EL R
Sbjct: 587 GELNR 591
>gi|308044597|ref|NP_001182884.1| uncharacterized protein LOC100501159 [Zea mays]
gi|238007964|gb|ACR35017.1| unknown [Zea mays]
Length = 580
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 187/536 (34%), Positives = 307/536 (57%), Gaps = 9/536 (1%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++++ A + ++AG++ AR+LFD M K+V+TW ++++GY++ G +QE++ LF MP
Sbjct: 28 LYLDTAMLDGYAKAGRVDRARELFDAMPVKNVVTWTSMVSGYFRAGRVQEARELFDVMPE 87
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+N SW ++ G N + +A + F MP+RN + AM+ ++ G++++A LF+ M
Sbjct: 88 RNDYSWTTVVQGYARNGMLREAREMFDRMPQRNVVAWTAMVKAYVDCGQIQQAWELFDMM 147
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSF--KNVVSWTVMITGYVKNERFCEAREL 227
P RN S+ AM+ GF+ G+V +A L + M KNVVSWT M+ G N C ARE
Sbjct: 148 PERNSYSWNAMISGFLSIGKVAEAVQLFERMPHRHKNVVSWTTMVAGLANNGLACRAREF 207
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F RMP D + A+IT + G L A+ LF+ + KD V+++ +I Y++N E
Sbjct: 208 FDRMPAKDTAAW--NAIITVYANNGQLNEAQRLFDSMLAKDLVTWSTIIEAYSKNERKHE 265
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL +F M + P+ TL+S+ + E +Q H LVI GF + S+ NA++T
Sbjct: 266 ALNMFLLMRHSAVSPNIRTLISILVISESTV---EVKQIHGLVIALGFLSETSLGNALLT 322
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MYSR G ++ + AF+++ + ++W +I+ AFA HG AL+ F+QM +G+ P T
Sbjct: 323 MYSRSGDLMSAWFAFKRLEQKDAITWTSIVQAFADHGCGYHALLGFAQMLRHGYKPSSTT 382
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
F ++LSAC H G V + +F+ + VYG+ P+ EHY+CLVD+L RAG + +A ++ GM
Sbjct: 383 FTAVLSACRHVGLVGKGRKMFKSIYHVYGLEPTIEHYSCLVDLLGRAGYVREAKELVDGM 442
Query: 468 PFE-ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
D + +LL ACV++ VE+ + + DP + Y +L+N++A+ GMW +
Sbjct: 443 QQGMRDEAILATLLGACVVHNEVEVAREVGEDLVRFDPSGTGGYRLLANVFASHGMWDET 502
Query: 527 TRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP-CIDKIHLELKRASVQMK 581
V +M+ + +S IE+ + H F D HP C + + + + QMK
Sbjct: 503 ANVWKVMRGSKAKRTPGFSQIEVNMRNHVFYSRDQEHPQCAEIYEMLIDTIAPQMK 558
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 125/278 (44%), Gaps = 20/278 (7%)
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
M+ ++ A LF P + +++ TAM+ G+ K G ++ AR LF+ + K+ V
Sbjct: 1 MVASRLRERDLTRAEALFGAAPAAARGLYLDTAMLDGYAKAGRVDRARELFDAMPVKNVV 60
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD--DATLVSVFTACSALQLLNEGRQSHV 328
++ +M++GY + G +EA LF D+ P+ D + +V + +L E R+
Sbjct: 61 TWTSMVSGYFRAGRVQEARELF------DVMPERNDYSWTTVVQGYARNGMLREARE--- 111
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
+ + NV A++ Y CG I + F + N SWN +I+ F G +
Sbjct: 112 -MFDRMPQRNVVAWTAMVKAYVDCGQIQQAWELFDMMPERNSYSWNAMISGFLSIGKVAE 170
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
A+ F +M + +++ ++++ + G + + F+ M + + ++
Sbjct: 171 AVQLFERMPHR--HKNVVSWTTMVAGLANNGLACRAREFFDRMPA-----KDTAAWNAII 223
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ + GQL +A ++ M D W +++ A N
Sbjct: 224 TVYANNGQLNEAQRLFDSM-LAKDLVTWSTIIEAYSKN 260
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 185/493 (37%), Positives = 295/493 (59%), Gaps = 3/493 (0%)
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMIS 151
+ G L ++ F S P K ++NC++AG R+ DA F +P + +YN ++S
Sbjct: 78 RRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLS 137
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
G + A RLF MP R+V+S+ M+ G K G V++A+A+ M +N VSW M
Sbjct: 138 CHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAM 197
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
++G+ + A E F P+ V TAM++G+ +G + A FE + ++ VS
Sbjct: 198 VSGFACSRDMSAAEEWFRNAPEKGDAVLW-TAMVSGYMDIGNVVKAIEYFEAMPVRNLVS 256
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+NA++AGY +N A++ALRLF M++ ++QP+ +TL SV CS L L G+Q H
Sbjct: 257 WNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWC 316
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ N++V ++++MY +CG + + F ++H+ ++V+WN +I+ +AQHG ++A+
Sbjct: 317 MKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAI 376
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F +M G +P+ ITF+++L+AC H G + + FE M ++YGI P +HY+C+VD+
Sbjct: 377 NLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDL 436
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L RAG+LE+A + + MPFE +G+LLAAC + N+E ELAA K+ E DPQ++ Y
Sbjct: 437 LCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAY 496
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V L+N+YA A W DV+RVR MK+ V K YSWIEI +H F D HP + IH
Sbjct: 497 VQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIH 556
Query: 571 LELKRASVQMKSV 583
+L + + +MK++
Sbjct: 557 EKLGQLAERMKAM 569
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 192/371 (51%), Gaps = 48/371 (12%)
Query: 54 NAKISALSRA-GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
N ++ +RA G+++ AR LFD++ T D +++N +++ ++ +G ++ LF SMPV+++
Sbjct: 101 NCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDV 160
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
VSWN M++G + +++A F AMP RN+ ++NAM+SGF + A F P +
Sbjct: 161 VSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEK 220
Query: 173 -NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
+ + +TAM+ G+M G V KA + M +N+VSW ++ GYVKN +A LF M
Sbjct: 221 GDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTM 280
Query: 232 -------PD-------------------------------YDKNVFVVTAMITGFCKVGM 253
P+ +N+ V T++++ +CK G
Sbjct: 281 VREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGD 340
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L +A LF + +D V++NAMI+GYAQ+G +EA+ LF M ++P+ T V+V TA
Sbjct: 341 LSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTA 400
Query: 314 CSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS----P 368
C L + G R + G E V + ++ + R G + E A I S P
Sbjct: 401 CIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL---ERAVDLIRSMPFEP 457
Query: 369 NLVSWNTIIAA 379
+ ++ T++AA
Sbjct: 458 HPSAYGTLLAA 468
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++L ++ + V + +S + G +S+A +LF +M T+DV+ WNA+I+GY Q+G +E+
Sbjct: 317 MKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAI 376
Query: 102 NLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISG 152
NLF+ M + N +++ ++ CI D F+ M E Y+ M+
Sbjct: 377 NLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDL 436
Query: 153 FLKHGRLEEATRLFEQMP 170
+ G+LE A L MP
Sbjct: 437 LCRAGKLERAVDLIRSMP 454
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 185/493 (37%), Positives = 296/493 (60%), Gaps = 3/493 (0%)
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMIS 151
+ G L ++ F S P K ++NC++AG R+ DA F +P + +YN ++S
Sbjct: 29 RRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLS 88
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
G + A RLF MP R+V+S+ M+ G K G V++A+A+ M +N VSW M
Sbjct: 89 CHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAM 148
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
++G+ + A E F P+ V + TAM++G+ +G + A FE + ++ VS
Sbjct: 149 VSGFACSRDMSAAEEWFRNAPEKGDAV-LWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVS 207
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+NA++AGY +N A++ALRLF M++ ++QP+ +TL SV CS L L G+Q H
Sbjct: 208 WNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWC 267
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ N++V ++++MY +CG + + F ++H+ ++V+WN +I+ +AQHG ++A+
Sbjct: 268 MKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAI 327
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F +M G +P+ ITF+++L+AC H G + + FE M ++YGI P +HY+C+VD+
Sbjct: 328 NLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDL 387
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L RAG+LE+A + + MPFE +G+LLAAC + N+E ELAA K+ E DPQ++ Y
Sbjct: 388 LCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAY 447
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V L+N+YA A W DV+RVR MK+ V K YSWIEI +H F D HP + IH
Sbjct: 448 VQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIH 507
Query: 571 LELKRASVQMKSV 583
+L + + +MK++
Sbjct: 508 EKLGQLAERMKAM 520
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 192/371 (51%), Gaps = 48/371 (12%)
Query: 54 NAKISALSRA-GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
N ++ +RA G+++ AR LFD++ T D +++N +++ ++ +G ++ LF SMPV+++
Sbjct: 52 NCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDV 111
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
VSWN M++G + +++A F AMP RN+ ++NAM+SGF + A F P +
Sbjct: 112 VSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEK 171
Query: 173 -NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
+ + +TAM+ G+M G V KA + M +N+VSW ++ GYVKN +A LF M
Sbjct: 172 GDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTM 231
Query: 232 -------PD-------------------------------YDKNVFVVTAMITGFCKVGM 253
P+ +N+ V T++++ +CK G
Sbjct: 232 VREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGD 291
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L +A LF + +D V++NAMI+GYAQ+G +EA+ LF M ++P+ T V+V TA
Sbjct: 292 LSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTA 351
Query: 314 CSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS----P 368
C L + G R + G E V + ++ + R G + E A I S P
Sbjct: 352 CIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL---ERAVDLIRSMPFEP 408
Query: 369 NLVSWNTIIAA 379
+ ++ T++AA
Sbjct: 409 HPSAYGTLLAA 419
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++L ++ + V + +S + G +S+A +LF +M T+DV+ WNA+I+GY Q+G +E+
Sbjct: 268 MKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAI 327
Query: 102 NLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISG 152
NLF+ M + N +++ ++ CI D F+ M E Y+ M+
Sbjct: 328 NLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDL 387
Query: 153 FLKHGRLEEATRLFEQMP 170
+ G+LE A L MP
Sbjct: 388 LCRAGKLERAVDLIRSMP 405
>gi|414873978|tpg|DAA52535.1| TPA: hypothetical protein ZEAMMB73_896450 [Zea mays]
gi|414873979|tpg|DAA52536.1| TPA: hypothetical protein ZEAMMB73_896450 [Zea mays]
Length = 701
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 187/536 (34%), Positives = 307/536 (57%), Gaps = 9/536 (1%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++++ A + ++AG++ AR+LFD M K+V+TW ++++GY++ G +QE++ LF MP
Sbjct: 149 LYLDTAMLDGYAKAGRVDRARELFDAMPVKNVVTWTSMVSGYFRAGRVQEARELFDVMPE 208
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+N SW ++ G N + +A + F MP+RN + AM+ ++ G++++A LF+ M
Sbjct: 209 RNDYSWTTVVQGYARNGMLREAREMFDRMPQRNVVAWTAMVKAYVDCGQIQQAWELFDMM 268
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSF--KNVVSWTVMITGYVKNERFCEAREL 227
P RN S+ AM+ GF+ G+V +A L + M KNVVSWT M+ G N C ARE
Sbjct: 269 PERNSYSWNAMISGFLSIGKVAEAVQLFERMPHRHKNVVSWTTMVAGLANNGLACRAREF 328
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F RMP D + A+IT + G L A+ LF+ + KD V+++ +I Y++N E
Sbjct: 329 FDRMPAKDTAAW--NAIITVYANNGQLNEAQRLFDSMLAKDLVTWSTIIEAYSKNERKHE 386
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL +F M + P+ TL+S+ + E +Q H LVI GF + S+ NA++T
Sbjct: 387 ALNMFLLMRHSAVSPNIRTLISILVISESTV---EVKQIHGLVIALGFLSETSLGNALLT 443
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MYSR G ++ + AF+++ + ++W +I+ AFA HG AL+ F+QM +G+ P T
Sbjct: 444 MYSRSGDLMSAWFAFKRLEQKDAITWTSIVQAFADHGCGYHALLGFAQMLRHGYKPSSTT 503
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
F ++LSAC H G V + +F+ + VYG+ P+ EHY+CLVD+L RAG + +A ++ GM
Sbjct: 504 FTAVLSACRHVGLVGKGRKMFKSIYHVYGLEPTIEHYSCLVDLLGRAGYVREAKELVDGM 563
Query: 468 PFE-ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
D + +LL ACV++ VE+ + + DP + Y +L+N++A+ GMW +
Sbjct: 564 QQGMRDEAILATLLGACVVHNEVEVAREVGEDLVRFDPSGTGGYRLLANVFASHGMWDET 623
Query: 527 TRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP-CIDKIHLELKRASVQMK 581
V +M+ + +S IE+ + H F D HP C + + + + QMK
Sbjct: 624 ANVWKVMRGSKAKRTPGFSQIEVNMRNHVFYSRDQEHPQCAEIYEMLIDTIAPQMK 679
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 151/349 (43%), Gaps = 24/349 (6%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
R AT NA + HG + E + Q ++ + T D + G ARA+ D
Sbjct: 55 RRRDATGNAALRC---HGTVAEPSTPPWQRDAQDDVCSTTGHDPRPQHGAA-AARAVLDD 110
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
++ M+ ++ A LF P + +++ TAM+ G+ K G ++ AR
Sbjct: 111 DETPGADAYAAMVASRLRERDLTRAEALFGAAPAAARGLYLDTAMLDGYAKAGRVDRARE 170
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD--DATLVSVFTACSAL 317
LF+ + K+ V++ +M++GY + G +EA LF D+ P+ D + +V +
Sbjct: 171 LFDAMPVKNVVTWTSMVSGYFRAGRVQEARELF------DVMPERNDYSWTTVVQGYARN 224
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
+L E R+ + + NV A++ Y CG I + F + N SWN +I
Sbjct: 225 GMLREARE----MFDRMPQRNVVAWTAMVKAYVDCGQIQQAWELFDMMPERNSYSWNAMI 280
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
+ F G +A+ F +M + +++ ++++ + G + + F+ M
Sbjct: 281 SGFLSIGKVAEAVQLFERMPHR--HKNVVSWTTMVAGLANNGLACRAREFFDRMPA---- 334
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ + ++ + + GQL +A ++ M D W +++ A N
Sbjct: 335 -KDTAAWNAIITVYANNGQLNEAQRLFDSM-LAKDLVTWSTIIEAYSKN 381
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 185/493 (37%), Positives = 296/493 (60%), Gaps = 3/493 (0%)
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMIS 151
+ G L ++ F S P K ++NC++AG R+ DA F +P + +YN ++S
Sbjct: 29 RRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLS 88
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
G + A RLF MP R+V+S+ M+ G K G V++A+A+ M +N VSW M
Sbjct: 89 CHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAM 148
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
++G+ + A E F P+ V + TAM++G+ +G + A FE + ++ VS
Sbjct: 149 VSGFACSRDMSAAEEWFRNAPEKGDAV-LWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVS 207
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+NA++AGY +N A++ALRLF M++ ++QP+ +TL SV CS L L G+Q H
Sbjct: 208 WNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWC 267
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ N++V ++++MY +CG + + F ++H+ ++V+WN +I+ +AQHG ++A+
Sbjct: 268 MKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAI 327
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F +M G +P+ ITF+++L+AC H G + + FE M ++YGI P +HY+C+VD+
Sbjct: 328 NLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDL 387
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L RAG+LE+A + + MPFE +G+LLAAC + N+E ELAA K+ E DPQ++ Y
Sbjct: 388 LCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAY 447
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V L+N+YA A W DV+RVR MK+ V K YSWIEI +H F D HP + IH
Sbjct: 448 VQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIH 507
Query: 571 LELKRASVQMKSV 583
+L + + +MK++
Sbjct: 508 EKLGQLAERMKAM 520
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 192/371 (51%), Gaps = 48/371 (12%)
Query: 54 NAKISALSRA-GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
N ++ +RA G+++ AR LFD++ T D +++N +++ ++ +G ++ LF SMPV+++
Sbjct: 52 NCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDV 111
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
VSWN M++G + +++A F AMP RN+ ++NAM+SGF + A F P +
Sbjct: 112 VSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEK 171
Query: 173 -NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
+ + +TAM+ G+M G V KA + M +N+VSW ++ GYVKN +A LF M
Sbjct: 172 GDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTM 231
Query: 232 -------PD-------------------------------YDKNVFVVTAMITGFCKVGM 253
P+ +N+ V T++++ +CK G
Sbjct: 232 VREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGD 291
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L +A LF + +D V++NAMI+GYAQ+G +EA+ LF M ++P+ T V+V TA
Sbjct: 292 LSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTA 351
Query: 314 CSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS----P 368
C L + G R + G E V + ++ + R G + E A I S P
Sbjct: 352 CIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL---ERAVDLIRSMPFEP 408
Query: 369 NLVSWNTIIAA 379
+ ++ T++AA
Sbjct: 409 HPSAYGTLLAA 419
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++L ++ + V + +S + G +S+A +LF +M T+DV+ WNA+I+GY Q+G +E+
Sbjct: 268 MKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAI 327
Query: 102 NLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISG 152
NLF+ M + N +++ ++ CI D F+ M E Y+ M+
Sbjct: 328 NLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDL 387
Query: 153 FLKHGRLEEATRLFEQMP 170
+ G+LE A L MP
Sbjct: 388 LCRAGKLERAVDLIRSMP 405
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 195/518 (37%), Positives = 310/518 (59%), Gaps = 28/518 (5%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
+V N + ++ G I AR+LFD+M + V WN +I+GYW+ G +E+ LF M
Sbjct: 63 YVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQ 122
Query: 109 --VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+N+++W MI G + A YF MPER+ ++NAM+SG+ + G EE RLF
Sbjct: 123 EISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLF 182
Query: 167 EQM-------PRRN-----VISYTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMIT 213
M P + S +++ D + + V R L D + F+ N T ++
Sbjct: 183 NDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIV---RKLDDKVGFRPNYFVKTALLD 239
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVV-TAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ K A ++F ++ Y V AMI+ + +VG L +A+ LF+++ +D VS+
Sbjct: 240 MHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSW 299
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMD--MQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
N+MIAGY QNG + +A++LF MI + +PD+ T+VSVF+AC L L G + ++
Sbjct: 300 NSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSIL 359
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
N + ++SV N++I MYSRCG + D+ L F+++ + +LVS+NT+I+ FA+HGH +++
Sbjct: 360 KVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESI 419
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
S+M +G +PD IT++++L+AC HAG ++E LFE + P +HY C++D+
Sbjct: 420 ELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK-----FPDVDHYACMIDM 474
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L RAG+LE+A ++ Q MP E G++GSLL A I+ VELGELAA K+ +++P NS Y
Sbjct: 475 LGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNY 534
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
+LSN+YA+AG W++ +VR M++QGV K SW+E
Sbjct: 535 ALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 572
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 170/376 (45%), Gaps = 88/376 (23%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+R+ N ++ + K+G +E A +LF++MP R V + M+ G+ K G ++A L
Sbjct: 59 DRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHV 118
Query: 200 MS----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
M +NV++WT MITG+ K AR F +MP +++V AM++
Sbjct: 119 MGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMP--ERSVVSWNAMLS--------- 167
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTAC 314
GYAQ G EE +RLF+ M+ ++QPD+ T +V ++C
Sbjct: 168 ----------------------GYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSC 205
Query: 315 SAL--QLLNEGRQSHVLVIRN-----GFEANVSVCNAVITMYSRCGGILDSELAFRQI-- 365
S+L L+E ++R GF N V A++ M+++CG + + F Q+
Sbjct: 206 SSLGDPCLSES------IVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 259
Query: 366 --------------------------------HSPNLVSWNTIIAAFAQHGHYEKALIFF 393
+ VSWN++IA + Q+G KA+ F
Sbjct: 260 YKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLF 319
Query: 394 SQM--GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
+M + PD +T +S+ SACGH G++ + ++KV I S Y L+++
Sbjct: 320 EEMISSEDSRKPDEVTMVSVFSACGHLGELGLG-NWAVSILKVNHIQISISVYNSLINMY 378
Query: 452 SRAGQLEKAWQITQGM 467
SR G ++ A I Q M
Sbjct: 379 SRCGSMQDAVLIFQEM 394
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 44/280 (15%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
YD++ +V ++ + K G +E AR LF+ + + +N MI+GY + G EEA LF
Sbjct: 58 YDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFH 117
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M G Q NV +IT +++ G
Sbjct: 118 VM---------------------------GDQE--------ISRNVITWTTMITGHAKKG 142
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFLSLL 412
+ + + F ++ ++VSWN +++ +AQ G E+ + F+ M G PD T+ +++
Sbjct: 143 NLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVI 202
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP-FEA 471
S+C G S + + G P+ T L+D+ ++ G LE A +I + + ++
Sbjct: 203 SSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKY 262
Query: 472 DTGV-WGSLLAACVINLNVELGEL-AAKKMRELDPQNSAV 509
+ V W ++++A +G+L +AK + + PQ V
Sbjct: 263 RSSVPWNAMISAY-----ARVGDLPSAKHLFDKMPQRDTV 297
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V N+ I+ SR G + A +F +M T+D++++N +I+G+ ++G ES L M
Sbjct: 368 ISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKE 427
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
I +++ ++ C +D+ F+++ + Y MI + GRLEEA +L
Sbjct: 428 DGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKL 487
Query: 166 FEQMP 170
+ MP
Sbjct: 488 IQSMP 492
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 122/263 (46%), Gaps = 34/263 (12%)
Query: 275 MIAGYAQNGVAEEA-LRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVL--- 329
M+ Y+Q GV + + LF M++ D++P+ A+ SV + + G +S +
Sbjct: 1 MLKYYSQIGVHSQVFVSLFKHMLQHCDIKPN-ASFYSVM-------MKSAGSESMLFLAH 52
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
V+++G++ + V N ++ +Y++ G I + F ++ + WN +I+ + + G+ E+A
Sbjct: 53 VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA 112
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
F MG + IT+ ++++ G + + F+ M + S + ++
Sbjct: 113 STLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPE-----RSVVSWNAMLS 167
Query: 450 ILSRAGQLEKAWQITQGM----PFEADTGVWGSLLAACVINLNVELGE--LAAKKMRELD 503
++ G E+ ++ M + D W +++++C LG+ L+ +R+LD
Sbjct: 168 GYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSC-----SSLGDPCLSESIVRKLD 222
Query: 504 PQ-----NSAVYVMLSNLYAAAG 521
+ N V L +++A G
Sbjct: 223 DKVGFRPNYFVKTALLDMHAKCG 245
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 195/518 (37%), Positives = 310/518 (59%), Gaps = 28/518 (5%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
+V N + ++ G I AR+LFD+M + V WN +I+GYW+ G +E+ LF M
Sbjct: 120 YVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQ 179
Query: 109 --VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+N+++W MI G + A YF MPER+ ++NAM+SG+ + G EE RLF
Sbjct: 180 EISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLF 239
Query: 167 EQM-------PRRN-----VISYTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMIT 213
M P + S +++ D + + V R L D + F+ N T ++
Sbjct: 240 NDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIV---RKLDDKVGFRPNYFVKTALLD 296
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVV-TAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ K A ++F ++ Y V AMI+ + +VG L +A+ LF+++ +D VS+
Sbjct: 297 MHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSW 356
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMD--MQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
N+MIAGY QNG + +A++LF MI + +PD+ T+VSVF+AC L L G + ++
Sbjct: 357 NSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSIL 416
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
N + ++SV N++I MYSRCG + D+ L F+++ + +LVS+NT+I+ FA+HGH +++
Sbjct: 417 KVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESI 476
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
S+M +G +PD IT++++L+AC HAG ++E LFE + P +HY C++D+
Sbjct: 477 ELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK-----FPDVDHYACMIDM 531
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L RAG+LE+A ++ Q MP E G++GSLL A I+ VELGELAA K+ +++P NS Y
Sbjct: 532 LGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNY 591
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
+LSN+YA+AG W++ +VR M++QGV K SW+E
Sbjct: 592 ALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 629
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 198/450 (44%), Gaps = 93/450 (20%)
Query: 71 QLFDQMTTKDVITWNAIITGYWQNG-----FLQESKNLFQSMPVKNIVSWNCMIAGCIDN 125
+F T DV + ++ Y Q G F+ K++ Q +K S+ ++ +
Sbjct: 42 HIFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGS 101
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
+ + ++ +R+ N ++ + K+G +E A +LF++MP R V + M+ G+
Sbjct: 102 ESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYW 161
Query: 186 KKGEVDKARALSDYMS----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
K G ++A L M +NV++WT MITG+ K AR F +MP +++V
Sbjct: 162 KCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMP--ERSVVSW 219
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DM 300
AM++ GYAQ G EE +RLF+ M+ ++
Sbjct: 220 NAMLS-------------------------------GYAQGGAPEETIRLFNDMLSPGNV 248
Query: 301 QPDDATLVSVFTACSAL--QLLNEGRQSHVLVIRN-----GFEANVSVCNAVITMYSRCG 353
QPD+ T +V ++CS+L L+E ++R GF N V A++ M+++CG
Sbjct: 249 QPDETTWATVISSCSSLGDPCLSES------IVRKLDDKVGFRPNYFVKTALLDMHAKCG 302
Query: 354 GILDSELAFRQI----------------------------------HSPNLVSWNTIIAA 379
+ + F Q+ + VSWN++IA
Sbjct: 303 NLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAG 362
Query: 380 FAQHGHYEKALIFFSQM--GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
+ Q+G KA+ F +M + PD +T +S+ SACGH G++ + ++KV I
Sbjct: 363 YTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLG-NWAVSILKVNHI 421
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
S Y L+++ SR G ++ A I Q M
Sbjct: 422 QISISVYNSLINMYSRCGSMQDAVLIFQEM 451
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 44/280 (15%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
YD++ +V ++ + K G +E AR LF+ + + +N MI+GY + G EEA LF
Sbjct: 115 YDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFH 174
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M G Q NV +IT +++ G
Sbjct: 175 VM---------------------------GDQE--------ISRNVITWTTMITGHAKKG 199
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFLSLL 412
+ + + F ++ ++VSWN +++ +AQ G E+ + F+ M G PD T+ +++
Sbjct: 200 NLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVI 259
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP-FEA 471
S+C G S + + G P+ T L+D+ ++ G LE A +I + + ++
Sbjct: 260 SSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKY 319
Query: 472 DTGV-WGSLLAACVINLNVELGEL-AAKKMRELDPQNSAV 509
+ V W ++++A +G+L +AK + + PQ V
Sbjct: 320 RSSVPWNAMISAY-----ARVGDLPSAKHLFDKMPQRDTV 354
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V N+ I+ SR G + A +F +M T+D++++N +I+G+ ++G ES L M
Sbjct: 425 ISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKE 484
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
I +++ ++ C +D+ F+++ + Y MI + GRLEEA +L
Sbjct: 485 DGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKL 544
Query: 166 FEQMP 170
+ MP
Sbjct: 545 IQSMP 549
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEA-LRLFSGMIKM-DMQPDDATLVSVFTACSAL 317
+F D F M+ Y+Q GV + + LF M++ D++P+ A+ SV
Sbjct: 43 IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPN-ASFYSVM------ 95
Query: 318 QLLNEGRQSHVL---VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ + G +S + V+++G++ + V N ++ +Y++ G I + F ++ + WN
Sbjct: 96 -MKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWN 154
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I+ + + G+ E+A F MG + IT+ ++++ G + + F+ M +
Sbjct: 155 VMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPE- 213
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM----PFEADTGVWGSLLAACVINLNVE 490
S + ++ ++ G E+ ++ M + D W +++++C
Sbjct: 214 ----RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSC-----SS 264
Query: 491 LGE--LAAKKMRELDPQ-----NSAVYVMLSNLYAAAG 521
LG+ L+ +R+LD + N V L +++A G
Sbjct: 265 LGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCG 302
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/555 (35%), Positives = 322/555 (58%), Gaps = 32/555 (5%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
+ L+ F+ N + +++G +S AR LFD+M+ +DV +WNA+++ Y ++G +++ +
Sbjct: 50 LHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLR 109
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK------ 155
+F M V + VS+N +IAG N A ++F M E + + L
Sbjct: 110 AVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLL 169
Query: 156 --------HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
HGR+ AT L E +V + A+ + + K G +D+AR L D M KNVVS
Sbjct: 170 DIKRGKQIHGRIV-ATSLGE-----SVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVS 223
Query: 208 WTVMITGYVKNER-------FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
W MI+GY++N + FCE + MPD ++ +++ + + G ++ A
Sbjct: 224 WNSMISGYLQNGQPETCTKLFCEMQSSGL-MPDQ----VTISNILSAYFQCGYIDEACKT 278
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F I+ KD V + M+ G AQNG E+AL LF M+ +++PD+ T+ SV ++C+ L L
Sbjct: 279 FREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASL 338
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+G+ H + G + ++ V +A++ MYS+CG D+ + F+++ + N++SWN++I +
Sbjct: 339 CQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGY 398
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
AQ+G +AL + +M PD ITF+ +LSAC HAG V F + K++G+ P+
Sbjct: 399 AQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPT 458
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
+HY+C++++L RAG ++KA + + M FE + +W +LL+ C IN +V GE+AA+ +
Sbjct: 459 FDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLF 518
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
ELDP N+ Y+MLSN+YAA G W+DV VR LMK + K AYSWIEI N+VH F+ D
Sbjct: 519 ELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAED 578
Query: 561 MSHPCIDKIHLELKR 575
+H ++I+ EL R
Sbjct: 579 RTHSETEQIYEELNR 593
>gi|297837203|ref|XP_002886483.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
gi|297332324|gb|EFH62742.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
Length = 1243
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/552 (36%), Positives = 309/552 (55%), Gaps = 60/552 (10%)
Query: 54 NAKISALSRAGKI---SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
NA IS G I AR+LFD+M ++D +WN +I+GY +N + E+ LF+ MP +
Sbjct: 450 NAMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRISEALLLFEKMPER 509
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR------ 164
N VSW+ MI G N ++ AFD F+ MP +++++ A+++G +K+ RLEEA
Sbjct: 510 NAVSWSAMITGFCHNGEVNRAFDLFRRMPVKDSSSLCALVAGLIKNERLEEAAWVLGQYG 569
Query: 165 -------------------------------LFEQMP----------------RRNVISY 177
LF+Q+P RRNV+S+
Sbjct: 570 SLDSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVSW 629
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
+M+ ++K G+V AR L D M ++ +SW MI GYV R +A LF MP+ D +
Sbjct: 630 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMDDAFALFSEMPNRDAH 689
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ M++G+ VG LE AR FE+ K+ VS+N++IA Y +N +EA+ +F M
Sbjct: 690 SW--NMMVSGYASVGNLELARHYFEKTPEKNIVSWNSIIAAYDKNKDYKEAVDVFIRMNI 747
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+PD TL S+ + + L L G Q H +V++ +V V NA+ITMYSRCG I++
Sbjct: 748 DGEKPDPHTLTSLLSVSTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIME 806
Query: 358 SELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
S F ++ +++WN II +A HG+ +AL F M G P ITF+S+L+AC
Sbjct: 807 SRRIFDEMKLKREVITWNAIIGGYAFHGNASEALNLFWSMKCYGIHPSHITFVSVLNACA 866
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
HAG V+E+ + F M+ VY I P EHY+ LV+++S GQ E+A + + MPFE D VW
Sbjct: 867 HAGLVDEAKEQFLSMMSVYKIEPQMEHYSSLVNVISGQGQFEEAMYVIKSMPFEPDKTVW 926
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
G+LL AC I NV L +AA+ M L+P++S YV+L N+YA G+W + ++VR+ M+ +
Sbjct: 927 GALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESK 986
Query: 537 GVTKQCAYSWIE 548
+ K+ SW++
Sbjct: 987 RIKKERGSSWVD 998
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 206/444 (46%), Gaps = 65/444 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMT----------------TKDVITWNAIITGYWQ 93
V+ N I + G++ AAR LFDQ+ ++V++WN++I Y +
Sbjct: 579 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVSWNSMIKAYLK 638
Query: 94 NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
G + ++ LF M ++ +SWN MI G + R+DDAF F MP R+ ++N M+SG+
Sbjct: 639 VGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMDDAFALFSEMPNRDAHSWNMMVSGY 698
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF-------KNVV 206
G LE A FE+ P +N++S+ +++ + K + +A + M+ +
Sbjct: 699 ASVGNLELARHYFEKTPEKNIVSWNSIIAAYDKNKDYKEAVDVFIRMNIDGEKPDPHTLT 758
Query: 207 SWTVMITGYVKNERFCEARELFYR--MPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
S + TG V + ++ + +PD V V A+IT + + G + +R +F+ +
Sbjct: 759 SLLSVSTGLVNLRLGMQMHQIVVKTVIPD----VPVHNALITMYSRCGEIMESRRIFDEM 814
Query: 265 QPK-DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ K + +++NA+I GYA +G A EAL LF M + P T VSV AC+ L++E
Sbjct: 815 KLKREVITWNAIIGGYAFHGNASEALNLFWSMKCYGIHPSHITFVSVLNACAHAGLVDEA 874
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
++ + S ++ +I P + +++++ +
Sbjct: 875 KEQFL-----------------------------SMMSVYKIE-PQMEHYSSLVNVISGQ 904
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +E+A+ M F+PD + +LL AC V + E M ++ SS
Sbjct: 905 GQFEEAMYVIKSM---PFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEP--ESSTP 959
Query: 444 YTCLVDILSRAGQLEKAWQITQGM 467
Y L ++ + G ++A Q+ M
Sbjct: 960 YVLLYNMYADMGLWDEASQVRMNM 983
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 217/641 (33%), Positives = 337/641 (52%), Gaps = 88/641 (13%)
Query: 43 RLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
R+ TQ+ +F+ N I + + AR+LFD+M ++ TWN++I+ ++GFL E
Sbjct: 40 RILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDE 99
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLK 155
+ LF SMP + SWN M++G +DR +++ +YF M N ++ + +S
Sbjct: 100 AARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAG 159
Query: 156 HGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
L T++ + + +V +A++D + K G V A + M +N+V+W +
Sbjct: 160 LMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSL 219
Query: 212 ITGYVKNERFCEARELFYRM------PD-------------------------------- 233
IT Y +N EA E+F RM PD
Sbjct: 220 ITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNK 279
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQ---------------------------- 265
+ ++ + A++ + K + AR +F+R+
Sbjct: 280 FRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFS 339
Query: 266 ---PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
++ VS+NA+IAGY QNG EEALRLF + + + P T ++ +AC+ L L
Sbjct: 340 KMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLL 399
Query: 323 GRQSHVLVIRNGF------EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
GRQ+H V++ GF E+++ V N++I MY +CG I D F ++ + VSWN I
Sbjct: 400 GRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAI 459
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I +AQ+G+ +AL F +M + G PD +T + +L AC HAG V E F ++ +G
Sbjct: 460 IVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYF-FSMEEHG 518
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
+IP +HYTC+VD+L RAG L +A + + MP D VWGSLLAAC ++ N+E+G+ AA
Sbjct: 519 LIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAA 578
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
+K+ E+DP NS YV+LSN+YA G W DV RVR LM++QGVTKQ SWIE+ ++VH F
Sbjct: 579 EKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVF 638
Query: 557 LGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSWSSFD 597
L D SHP +I+ LK + QMK V ++ A + ++D
Sbjct: 639 LVKDKSHPHRKQIYSVLKMLTEQMKRV-GYIPDANDFEAYD 678
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 45/224 (20%)
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
G+++ P+ + + +C + R H ++ F + + N +I +Y +C
Sbjct: 5 GLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCD 64
Query: 354 GILDSELAFRQIHSPNLVSWNTII-------------------------------AAFAQ 382
+ D+ F ++ N +WN++I + FAQ
Sbjct: 65 CLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQ 124
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
H +E++L +F +M F + +F S LSAC AG MDL + +V+ ++ S
Sbjct: 125 HDRFEESLEYFVKMHREDFLLNEYSFGSALSAC--AGL----MDL-NMGTQVHALVSKSR 177
Query: 443 HYT------CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ T L+D+ S+ G + A ++ GM E + W SL+
Sbjct: 178 YSTDVYMGSALIDMYSKCGSVACAEEVFSGM-IERNLVTWNSLI 220
>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 647
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/531 (37%), Positives = 301/531 (56%), Gaps = 51/531 (9%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN 125
+ R+LF+ M +D ++WN +I+GY +NG + ++ LF +MP +N VS N +I G + N
Sbjct: 120 VEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNALITGFLLN 179
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL-------------------------- 159
+D A D+F+ MPE + + +A+ISG +++G L
Sbjct: 180 GDVDSAVDFFRTMPEHYSTSLSALISGLVRNGELDMAAGILCECGNGDDDLVHAYNTLIA 239
Query: 160 --------EEATRLFEQMP-------------RRNVISYTAMLDGFMKKGEVDKARALSD 198
EEA RLF+ +P RRNV+S+ +M+ ++K G++ AR L D
Sbjct: 240 GYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSARELFD 299
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
M ++ SW MI+GYV+ EA +LF MP D V +++GF + G L A+
Sbjct: 300 RMVEQDTCSWNTMISGYVQISNMEEASKLFREMPIPD--VLSWNLIVSGFAQKGDLNLAK 357
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
FER+ K+ +S+N++IAGY +N + A++LFS M +PD TL SV + C+ L
Sbjct: 358 DFFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVCTGLV 417
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTII 377
L G+Q H LV + + + N++ITMYSRCG I+D+ F +I ++++WN +I
Sbjct: 418 NLYLGKQIHQLVTKIVI-PDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMI 476
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
+A HG +AL F M P ITF+S+++AC HAG V E F+ M+ YGI
Sbjct: 477 GGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGLVEEGRRQFKSMINDYGI 536
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAK 497
EH+ LVDIL R GQL++A + MPF+ D VWG+LL+AC ++ NVEL +AA
Sbjct: 537 ERRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLSACRVHNNVELALVAAD 596
Query: 498 KMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
+ L+P++SA YV+L N+YA G W D VR+LM+E+ V KQ YSW++
Sbjct: 597 ALIRLEPESSAPYVLLYNIYANLGQWDDAESVRVLMEEKNVKKQAGYSWVD 647
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTT-KDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+NN+ I+ SR G I A +F+++ KDVITWNA+I GY +G E+ LF+ M
Sbjct: 439 INNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHGLAAEALELFKLMKRL 498
Query: 111 NI----VSWNCMIAGCIDNDRIDDAFDYFQAM-----PERNTATYNAMISGFLKHGRLEE 161
I +++ ++ C +++ F++M ER + +++ + G+L+E
Sbjct: 499 KIHPTYITFISVMNACAHAGLVEEGRRQFKSMINDYGIERRVEHFASLVDILGRQGQLQE 558
Query: 162 ATRLFEQMP 170
A L MP
Sbjct: 559 AMDLINTMP 567
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 318/602 (52%), Gaps = 41/602 (6%)
Query: 19 PILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTT 78
PIL +ST S P R Q++ + L ++ A QL
Sbjct: 30 PILTPMSTAASALRPAPRWGAPSQRRLVEQHLASLPHGLQHLHHVQELHA--QLLKHGLH 87
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW--NCMIAGCIDNDRIDDAFDYFQ 136
D + + +I+ Y L S+ +F S P ++ N ++ N A F
Sbjct: 88 LDPLAASKLISSYALQRRLPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFS 147
Query: 137 AMPERNTATY----------------------------------NAMISGFLKHGRLEEA 162
AMP+R++ TY NA+I + K+G +A
Sbjct: 148 AMPQRDSFTYSFLIKALSSSGLTPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDA 207
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+++FE+MPRR+ +S+ + + +++GEV AR + D M K+ VSW ++ GY K +
Sbjct: 208 SKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKME 267
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+A ELF MP+ +NV + +++G+CK G +E AR++F+++ K+ V++ M++ AQN
Sbjct: 268 DAFELFQCMPE--RNVVSWSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQN 325
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G+ EEA RLF+ M + ++ D A +VS+ AC+ L G++ H V + VC
Sbjct: 326 GLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVC 385
Query: 343 NAVITMYSRCGGILDSELAF-RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
NA+I M+ +CG + ++ F +I + VSWNTII FA HGH +KAL FF+QM L GF
Sbjct: 386 NAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGF 445
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
PD +T +++LSAC H G V E F M + YGI+P EHY C++D+L R G +E+A
Sbjct: 446 RPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAV 505
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
+ + MP++ + +WGSLL+AC ++ NVE E+A ++ +L P N+ Y +LSN+YA AG
Sbjct: 506 GLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAG 565
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
W D+ + R+ MK G K SWIE+ H F GD H D+I + R S +K
Sbjct: 566 QWSDMAKARMQMKGTGSQKSAGSSWIELDEAFHEFTVGDRKHSDSDQISEMVDRLSSHVK 625
Query: 582 SV 583
V
Sbjct: 626 DV 627
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 195/547 (35%), Positives = 318/547 (58%), Gaps = 14/547 (2%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA ++ R G + A+ +F+ +DVI+WN++I G+ Q+G + + LFQ M + +
Sbjct: 470 NALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELE 529
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY--------NAMISGFLKHGRLEEATRL 165
N A + + +A + + + R T + NA+I+ +++ G L++A +
Sbjct: 530 PDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNV 589
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVS-WTVMITGYVKNERF 221
F + R+V+S+TAM+ G +GE KA L M F+ V S ++ ++ +
Sbjct: 590 FHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACL 649
Query: 222 CEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
E +++ + + Y+ + V A+I+ + K G + +AR +F+++ +D VS+N +IAGY
Sbjct: 650 DEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGY 709
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
AQNG+ + A+ M + D+ P+ + VS+ ACS+ L EG++ H +++ + +V
Sbjct: 710 AQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDV 769
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
V A+I+MY++CG +++ F I N+V+WN +I A+AQHG KAL FF+ M
Sbjct: 770 RVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKE 829
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
G PDG TF S+LSAC HAG V E +F M YG++P+ EHY CLV +L RA + ++
Sbjct: 830 GIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQE 889
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
A + MPF D VW +LL AC I+ N+ L E AA +L+ +N AVY++LSN+YAA
Sbjct: 890 AETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAA 949
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQ 579
AG W DV ++R +M+ +G+ K+ SWIE+ N +H F+ D SHP +I+ ELKR SV+
Sbjct: 950 AGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVE 1009
Query: 580 MKSVDDF 586
M+ F
Sbjct: 1010 MEEAGYF 1016
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 239/481 (49%), Gaps = 18/481 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F++N I+ + + A Q+F +M +DVI+WN++I+ Y Q GF +++ LF+ M
Sbjct: 62 IFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQN 121
Query: 109 ---VKNIVSWNCMIAGCIDNDRIDDA----FDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ N +++ ++ C +++ +A +R+ N+++S + K G L
Sbjct: 122 AGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPR 181
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A ++F + R+V+SY ML + +K V + L MS + + V++ ++ +
Sbjct: 182 ARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTT 241
Query: 218 NERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E + + + + ++ V TA++T + G +++A+ F+ +D V +NA+
Sbjct: 242 PSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNAL 301
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IA AQ+G EA + M + + T +S+ ACS + L G+ H + +G
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++V + NA+I+MY+RCG + + F + +L+SWN IIA +A+ +A+ + Q
Sbjct: 362 SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQ 421
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G P +TFL LLSAC ++ + + E +++ GI + L+++ R G
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCG 480
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR--ELDPQNSAVYVML 513
L +A + +G D W S++A + + E ++M+ EL+P N +L
Sbjct: 481 SLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539
Query: 514 S 514
S
Sbjct: 540 S 540
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 227/471 (48%), Gaps = 22/471 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V A ++ R G + +A+Q F +DV+ +NA+I Q+G E+ + M
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT----YNAMISGFLKHGRLEE 161
N ++ ++ C + ++ + E ++ NA+IS + + G L +
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A LF MP+R++IS+ A++ G+ ++ + +A L M + V V++ +++
Sbjct: 384 ARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN 443
Query: 218 NERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ + + + + + N + A++ + + G L A+ +FE Q +D +S+N+M
Sbjct: 444 SSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSM 503
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAG+AQ+G E A +LF M +++PD+ T SV + C + L G+Q H + +G
Sbjct: 504 IAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGL 563
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ +V++ NA+I MY RCG + D+ F + +++SW +I A G KA+ F Q
Sbjct: 564 QLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQ 623
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M GF P TF S+L C + ++E + ++ G + L+ S++G
Sbjct: 624 MQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNS-GYELDTGVGNALISAYSKSG 682
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA---AKKMRELD 503
+ A ++ MP D W ++A N LG+ A A +M+E D
Sbjct: 683 SMTDAREVFDKMP-SRDIVSWNKIIAGYAQN---GLGQTAVEFAYQMQEQD 729
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 146/279 (52%), Gaps = 4/279 (1%)
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFER 263
++ ++ + EA+ + +M + ++F+ +I + K + +A +F+
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ +D +S+N++I+ YAQ G ++A +LF M P+ T +S+ TAC + L G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
++ H +I+ G++ + V N++++MY +CG + + F I ++VS+NT++ +AQ
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
+ ++ L F QM G PD +T+++LL A ++E + +L V+ G+
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE-EGLNSDIRV 266
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
T LV + R G ++ A Q +G + D V+ +L+AA
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGTA-DRDVVVYNALIAA 304
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 171/359 (47%), Gaps = 30/359 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V + NA I+ R G + AR +F + +DV++W A+I G G ++ LF M
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626
Query: 108 ----PVKNIVS---WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
PVK+ S C + C+D + A+ + E +T NA+IS + K G +
Sbjct: 627 EGFRPVKSTFSSILKVCTSSACLDEGKKVIAY-ILNSGYELDTGVGNALISAYSKSGSMT 685
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGYV 216
+A +F++MP R+++S+ ++ G+ + G A + M ++VV S+ ++
Sbjct: 686 DAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACS 745
Query: 217 KNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
E + + + +V V A+I+ + K G A+ +F+ I K+ V++NA
Sbjct: 746 SFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNA 805
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI YAQ+G+A +AL F+ M K ++PD +T S+ +AC+ L+ EG Q I +
Sbjct: 806 MINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQ-----IFSS 860
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHS--------PNLVSWNTIIAAFAQHGH 385
E+ V I Y G+L F++ + P+ W T++ A HG+
Sbjct: 861 MESEYGVL-PTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGN 918
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 115/240 (47%), Gaps = 5/240 (2%)
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+ + AT V++ C+ +LL E ++ H ++ ++ + N +I MY +C +LD+
Sbjct: 24 ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F+++ +++SWN++I+ +AQ G +KA F +M GF P+ IT++S+L+AC +
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + ++K G L+ + + G L +A Q+ G+ D + ++L
Sbjct: 144 LENGKKIHSQIIKA-GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS-PRDVVSYNTML 201
Query: 481 AACVINLNVE--LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
V+ LG + P + Y+ L + + M + R+ L E+G+
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISP-DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 191/534 (35%), Positives = 309/534 (57%), Gaps = 14/534 (2%)
Query: 59 ALSRAGKISAARQLFDQMTTKDVITW--NAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
AL R ++ A+R +F T+ N ++ Y N +E+ +F +MP ++ +++
Sbjct: 67 ALHR--RLPASRGVFASFPNPHATTFLPNTLLRAYALNALPREAVAVFSAMPHRDSFTYS 124
Query: 117 CMI-----AGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
+I AG + ++ +T NA+I + K+G +A+++FE+MPR
Sbjct: 125 FLIKALSSAGVAPLRAVHSHVVKLGSI--EDTYVGNALIDAYSKNGGFSDASKVFEEMPR 182
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
R+V+S+ + + +++GEV+ AR + D M K+ VSW ++ GY K EA +LF M
Sbjct: 183 RDVVSWNSAMAAMVRQGEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCM 242
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P+ +NV + +++G+CK G +E AR++F+++ K+ V++ M++ AQNG+ EEA +L
Sbjct: 243 PE--RNVVSWSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKL 300
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
F+ M + ++ D A +VS+ AC+ L G++ H V + VCNA+I M+ +
Sbjct: 301 FTQMKEASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCK 360
Query: 352 CGGILDSELAF-RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
CG I ++ F +I + VSWNTII FA HGH +KAL FF+QM L GF PD +T ++
Sbjct: 361 CGCINRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMIN 420
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+LSAC H G V E F M + YG++P EHY C++D+L R G +++A + + MP++
Sbjct: 421 VLSACTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWD 480
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
+ +WGSLL+AC ++ NVE E+A ++ +L P N+ Y +LS++YA AG W D+ + R
Sbjct: 481 PNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKAR 540
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVD 584
+ MK G K SWIE+ H F GD HP D+I + R S K VD
Sbjct: 541 MQMKGTGSQKSSGSSWIELDEAFHEFTVGDRKHPDSDQISEMVDRLSSHAKDVD 594
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 204/390 (52%), Gaps = 12/390 (3%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L S + +V NA I A S+ G S A ++F++M +DV++WN+ + + G ++ +
Sbjct: 145 VVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVEGA 204
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ +F M K+ VSWN ++ G +++AF FQ MPERN +++ ++SG+ K G +E
Sbjct: 205 RRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDME 264
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYV 216
A +F++MP +N++++T M+ + G V++A L M +V + ++
Sbjct: 265 MARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAACA 324
Query: 217 KNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE-RIQPKDCVSFN 273
++ + + + R ++ V A+I FCK G + A +F+ I KD VS+N
Sbjct: 325 ESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDSVSWN 384
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+I G+A +G ++AL F+ M PD T+++V +AC+ + + EGR+ + R+
Sbjct: 385 TIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYFANMERD 444
Query: 334 -GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
G + +I + R G I ++ +L PN V W ++++A H + E A I
Sbjct: 445 YGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEI 504
Query: 392 FFSQMGLNGFDPDGITFLSLLSAC-GHAGK 420
++ L+ P ++LS+ AGK
Sbjct: 505 AVNE--LSKLQPSNAGNYAVLSSIYAEAGK 532
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 318/562 (56%), Gaps = 43/562 (7%)
Query: 43 RLFSTQYVFVNNAKI---SALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
R FS F N + LSR +I AR++F+Q+ + V + +ITGY ++ L +
Sbjct: 27 RSFSVTVEFQNREVLICNHLLSR--RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVD 84
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+ NLF MPV+++VSWN MI+GC++ ++ A F MPER+ ++ AM++G + G++
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKV 144
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
++A RLF QMP ++ ++ +M+ G+++ G+VD A L M KNV+SWT MI G +NE
Sbjct: 145 DQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNE 204
Query: 220 RFCEARELFYRM----------------------PDYDKNV---------------FVVT 242
R EA +LF M P + + +V
Sbjct: 205 RSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSA 264
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++IT + + ++R +F+ + + A+++GY+ N E+AL +FSGM++ + P
Sbjct: 265 SLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILP 324
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
+ +T S +CSAL L+ G++ H + ++ G E + V N+++ MYS G + D+ F
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF 384
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+I ++VSWN+II AQHG + A + F QM +PD ITF LLSAC H G +
Sbjct: 385 IKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLE 444
Query: 423 ESMDLFELMVK-VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ LF M + I +HYTC+VDIL R G+L++A ++ + M + + VW +LL+
Sbjct: 445 KGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLS 504
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC ++ +V+ GE AA + LD ++SA YV+LSN+YA+AG W +V+++R+ MK+ G+ K+
Sbjct: 505 ACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKK 564
Query: 542 CAYSWIEIGNKVHYFLGGDMSH 563
SW+ I K H F GD H
Sbjct: 565 PGSSWVVIRGKKHEFFSGDQPH 586
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 208/649 (32%), Positives = 333/649 (51%), Gaps = 116/649 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV A I+ + G I A ++FD + T+D++TW ++ITG ++G +++ NLFQ M
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305
Query: 110 KNI----VSWNCMIAGCIDNDRID-----------------------------------D 130
+ + V++ ++ C + ++ D
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMED 365
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRR------------ 172
A + F + RN ++ AMI+GF +HGR++EA F +M P R
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425
Query: 173 ------------NVIS---------YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
++I TA+L + K G + A + + +S +NVV+W M
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAM 485
Query: 212 ITGYVKNERFCEARELFYRM------PD-------------------------------Y 234
IT YV++E++ A F + P+
Sbjct: 486 ITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGL 545
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ ++ V A+++ F G L +A+ LF + +D VS+N +IAG+ Q+G + A F
Sbjct: 546 ESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKM 605
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + ++PD T + AC++ + L EGR+ H L+ F+ +V V +I+MY++CG
Sbjct: 606 MQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGS 665
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I D+ F ++ N+ SW ++IA +AQHG ++AL F QM G PD ITF+ LSA
Sbjct: 666 IEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSA 725
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C HAG + E + F+ M K + I P EHY C+VD+ RAG L +A + M E D+
Sbjct: 726 CAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSR 784
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VWG+LL AC ++LNVEL E AA+K ELDP ++ V+V+LSN+YAAAGMW++V ++R +M
Sbjct: 785 VWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVML 844
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
++GV K+ SWIE+ KVH F D +HP ++IH EL+R ++M+ +
Sbjct: 845 DRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQL 893
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 241/452 (53%), Gaps = 22/452 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N I+ ++ G +A+Q+FD M KDV +WN ++ GY Q+G +E+ L + M
Sbjct: 145 IFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQ 204
Query: 110 KNIV----SWNCMIAGCIDNDRIDDAFDYF----QAMPERNTATYNAMISGFLKHGRLEE 161
++ ++ M+ C D +D + + +A + + A+I+ +K G + +
Sbjct: 205 DSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGD 264
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
AT++F+ +P R+++++T+M+ G + G +A L M + V V++ ++
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324
Query: 218 NERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E + +++ RM + +D ++V TA+++ + K G +E+A +F+ ++ ++ VS+ AM
Sbjct: 325 PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAG+AQ+G +EA F+ MI+ ++P+ T +S+ ACS+ L G+Q +I G+
Sbjct: 385 IAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGY 444
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++ V A+++MY++CG + D+ F +I N+V+WN +I A+ QH Y+ AL F
Sbjct: 445 GSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQA 504
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDL---FELMVKVYGIIPSSEHYTCLVDILS 452
+ G P+ TF S+L+ C K ++S++L ++ G+ LV +
Sbjct: 505 LLKEGIKPNSSTFTSILNVC----KSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
G L A + MP + D W +++A V
Sbjct: 561 NCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFV 591
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 169/329 (51%), Gaps = 38/329 (11%)
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI----SYTAMLDGFMKKGEVDKARAL 196
++T NA+++ K G+ EA ++ E++ ++ +Y+A+L +K
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIK---------- 122
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
FKN+ ER + PD +F+ +I + K G +
Sbjct: 123 -----FKNLGD----------GERIYNHIKKSGVQPD----IFMRNTLINMYAKCGNTIS 163
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A+ +F+ ++ KD S+N ++ GY Q+G+ EEA +L M++ ++PD T VS+ AC+
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD 223
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
+ +++GR+ + L+++ G++ ++ V A+I M+ +CG I D+ F + + +LV+W ++
Sbjct: 224 ARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSM 283
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I A+HG +++A F +M G PD + F+SLL AC H + + + M +V
Sbjct: 284 ITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW 343
Query: 437 IIPSSEHY--TCLVDILSRAGQLEKAWQI 463
+E Y T ++ + ++ G +E A ++
Sbjct: 344 ---DTEIYVGTAILSMYTKCGSMEDALEV 369
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 155/334 (46%), Gaps = 42/334 (12%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
++T +G C G ++F I KD NA++ ++ G EA+++ +
Sbjct: 52 MLTTSFSGRCPKGRC----VVFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSH 105
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+Q T ++ C + L +G + + + ++G + ++ + N +I MY++CG + ++
Sbjct: 106 IQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAK 165
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + ++ SWN ++ + QHG YE+A QM + PD TF+S+L+AC A
Sbjct: 166 QIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADAR 225
Query: 420 KVNESMDLFELMV----------------------------KVYGIIPSSE--HYTCLVD 449
V++ +L+ L++ KV+ +P+ + +T ++
Sbjct: 226 NVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMIT 285
Query: 450 ILSRAGQLEKAWQITQGMPFEA---DTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
L+R G+ ++A + Q M E D + SLL AC +E G+ +M+E+ +
Sbjct: 286 GLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVG-WD 344
Query: 507 SAVYV--MLSNLYAAAGMWRDVTRVRLLMKEQGV 538
+ +YV + ++Y G D V L+K + V
Sbjct: 345 TEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/533 (35%), Positives = 291/533 (54%), Gaps = 33/533 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N I R G++ +ARQ+FD+M +D ++WN++ITGY NG + ++ LF M +N
Sbjct: 139 VKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERN 198
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
++SW MI G + + +A F+ MPE++ A++ M+S ++ G L A LFE MP
Sbjct: 199 VISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPI 258
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
+V ++ M+ G K GE+D A+ D M +NV SW ++I GY+K AR +F +M
Sbjct: 259 HDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQM 318
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P +KN+ + MI GYA+ G +L+L
Sbjct: 319 P--EKNLVAWSTMI-------------------------------GGYAKTGHPYSSLKL 345
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+ + ++PD+ + + +ACS L + + + N+ V ++I MY++
Sbjct: 346 YKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAK 405
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG I + F + +L ++T+I AFA HG E A+ FS+M PDG+ FL +
Sbjct: 406 CGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGV 465
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L+AC H G V E LF M+ YGI PS +HY C+VDIL RAG LE+A + MP
Sbjct: 466 LTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAP 525
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
+ VWG+LL+AC ++LNV+L E AA ++ +++P NS YV+L N+YA AG W D ++VR
Sbjct: 526 NATVWGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRA 585
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVD 584
+++E V K SWIE+G+ +H F+ GD SH ++I L+ M +D
Sbjct: 586 MIRENRVRKNRGSSWIELGSVIHEFVMGDKSHFDSERIFFMLELLCKDMMFLD 638
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 136/302 (45%), Gaps = 24/302 (7%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K G + A LF+ + + A+I G+ +N E A F M + ++ P + T+
Sbjct: 46 YSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTI 105
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
SV A S L + +G + L +R G+E ++ V N +I ++ RCG + + F ++
Sbjct: 106 ASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEE 165
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+ VSWN++I + +G + A F +M + + I++ S++ AG + E+ L
Sbjct: 166 RDAVSWNSMITGYGNNGRVDIARKLFDRME----ERNVISWTSMIQGYVKAGDLLEARVL 221
Query: 428 FELMVKVYGIIPSSE--HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
FE M P + + +V G L A + + MP D G W +++ C
Sbjct: 222 FERM-------PEKDLASWKVMVSAYMSVGNLVAARNLFELMPIH-DVGTWNLMISGC-- 271
Query: 486 NLNVELGELAAKK--MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
+ GE+ A K + +N A +VM+ + Y G DV R + + A
Sbjct: 272 ---CKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVG---DVDAARSVFDQMPEKNLVA 325
Query: 544 YS 545
+S
Sbjct: 326 WS 327
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 117/257 (45%), Gaps = 22/257 (8%)
Query: 306 TLVS-VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
+L+S + C +L+ L +H+L+ + +++++ N ++ +YS+ G + + F +
Sbjct: 4 SLISKLLKQCRSLKTLTT-IHAHLLISGSIASSDLTL-NKLLRLYSKFGAVSYAHKLFDE 61
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
PN W +I F ++ YE A FF +M P T S+L A G++ +
Sbjct: 62 TPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDG 121
Query: 425 MDLFELMVKV---YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
++ L V+ + ++ + ++++ R G++ A Q+ M E D W S++
Sbjct: 122 DLVYGLAVRCGYEFDLVVKN----VMIELFMRCGEMGSARQMFDEME-ERDAVSWNSMIT 176
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL---MKEQGV 538
N V ++A K ++ +N + + Y AG D+ R+L M E+ +
Sbjct: 177 GYGNNGRV---DIARKLFDRMEERNVISWTSMIQGYVKAG---DLLEARVLFERMPEKDL 230
Query: 539 T--KQCAYSWIEIGNKV 553
K +++ +GN V
Sbjct: 231 ASWKVMVSAYMSVGNLV 247
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/548 (34%), Positives = 315/548 (57%), Gaps = 10/548 (1%)
Query: 38 SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
S+ + LF F++N ++ +++G+IS AR+LFD+MT +D +WNA+++ Y ++G +
Sbjct: 46 SHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLV 105
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
++ + +F +MP ++ VS+N +I+G N R A F M + L
Sbjct: 106 EDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNAC 165
Query: 158 RLEEATRLFEQMPRR--------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
R +Q+ R NV A+ D + + GE+D+AR L D M +NVV+W
Sbjct: 166 TQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWN 225
Query: 210 VMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+MI+GY+KN + + +LF+ M + + ++++ + + G ++ AR +F I+ K
Sbjct: 226 LMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREK 285
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D V + MI G AQNG E+AL LFS M+ + +PD T+ SV ++C+ L L G+ H
Sbjct: 286 DEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVH 345
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
G ++ V +A++ MY +CG D+ F + + N+VSWN++I +A +G
Sbjct: 346 GKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDL 405
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+AL + M PD +TF+ +LSAC HAG V E + F M +G+ P+ +HY C+
Sbjct: 406 EALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACM 465
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
V++ R+G ++KA + M E ++ +W ++L+ CV+ +++ GE+AA+ + EL+P N+
Sbjct: 466 VNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNA 525
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
Y+MLSN+YAA G W+DV +R LMK + V K AYSWIEI N+VH F+ D +HP
Sbjct: 526 VPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAK 585
Query: 568 KIHLELKR 575
IH++L R
Sbjct: 586 IIHVQLNR 593
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 168/411 (40%), Gaps = 74/411 (18%)
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
++ C A +D + + + +T +N +++ + K G + A +LF++M +R
Sbjct: 28 LALECFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQR 87
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+ S+ AML + K G V+ R + D M ++ VS+ +I+G+ N R A +F RM
Sbjct: 88 DNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQ 147
Query: 233 -------------------------------------DYDKNVFVVTAMITGFCKVGMLE 255
+ NVFV A+ + + G ++
Sbjct: 148 KEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEID 207
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
AR LF+R+ ++ V++N MI+GY +N E+ + LF M +++PD T SV A
Sbjct: 208 QARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA-- 265
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
Y + G I ++ F +I + V W
Sbjct: 266 ---------------------------------YIQAGYIDEARKVFGEIREKDEVCWTI 292
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+I AQ+G E AL+ FS+M L PDG T S++S+C + + +
Sbjct: 293 MIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHG-QVVHGKAFLM 351
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
G+ + LVD+ + G AW I M + W S++ +N
Sbjct: 352 GVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTR-NVVSWNSMIGGYALN 401
>gi|297744558|emb|CBI37820.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/502 (37%), Positives = 291/502 (57%), Gaps = 22/502 (4%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN 125
+ A QLFD M ++V++WNA++TG+ QNG ++ + F MP ++ S + ++AG I N
Sbjct: 1 MDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQN 60
Query: 126 DRIDDAFDYFQAMPERN------TATYNAMISGFLKHGRLEEATRLFEQMP--------- 170
+D+A ++ YN +++G+ ++GR+++A +LF+Q+P
Sbjct: 61 GELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDG 120
Query: 171 ---RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
RNV+S+ +M+ ++K ++ AR L D M ++ +SW MI+GYV+ EA L
Sbjct: 121 GRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWML 180
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F MP+ D +MI+GF + G LE AR LF I K+ VS+N+MIAGY NG +
Sbjct: 181 FQEMPNPD--TLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKG 238
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
A L+ M+ +PD TL SV + CS L+ G Q H + + ++ + N++IT
Sbjct: 239 ATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVI-PDIPINNSLIT 297
Query: 348 MYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MYSRCG I+++ F ++ ++SWN +I +A HG AL F M P I
Sbjct: 298 MYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYI 357
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
TF+S+L+AC HAG V E F+ M +GI P EH+ LVDI+ R GQLE+A +
Sbjct: 358 TFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINS 417
Query: 467 MPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
MPFE D VWG+LL AC ++ NVEL +AA+ + +L+P++SA YV+L N+YA G W +
Sbjct: 418 MPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNA 477
Query: 527 TRVRLLMKEQGVTKQCAYSWIE 548
T +R++M+ + KQ YSW++
Sbjct: 478 TEMRMMMERNNIRKQPGYSWVD 499
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 214/500 (42%), Gaps = 121/500 (24%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK------------ 101
NA ++ + G + A + F +M +D + +A++ G QNG L E+K
Sbjct: 20 NAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTSRRQDDD 79
Query: 102 -------------------------NLFQSMPV------------KNIVSWNCMIAGCID 124
LF +P +N+VSWN MI +
Sbjct: 80 KGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVK 139
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
I A F M ER+T ++N MISG+++ +EEA LF++MP + +++ +M+ GF
Sbjct: 140 ARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGF 199
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYD--- 235
+KG ++ ARAL + KN+VSW MI GY N + A EL+ +M PD
Sbjct: 200 AQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLS 259
Query: 236 ---------------------------KNVFVVTAMITGFCKVGMLENARLLFERIQ-PK 267
++ + ++IT + + G + AR +F+ ++ K
Sbjct: 260 SVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQK 319
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ +S+NAMI GYA +G A +AL LF M ++ ++P T +SV AC+ + EGR H
Sbjct: 320 EVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRM-H 378
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ F GI P + + +++ +HG E
Sbjct: 379 FKSMACEF------------------GI-----------EPRIEHFASLVDIVGRHGQLE 409
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+A+ + M F+PD + +LL AC V + E ++K+ SS Y L
Sbjct: 410 EAMDLINSM---PFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEP--ESSAPYVLL 464
Query: 448 VDILSRAGQLEKAWQITQGM 467
++ + GQ + A ++ M
Sbjct: 465 HNMYADVGQWDNATEMRMMM 484
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMT-TKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+NN+ I+ SR G I AR +FD++ K+VI+WNA+I GY +GF ++ LF+ M
Sbjct: 291 INNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRL 350
Query: 111 NI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEE 161
+ +++ ++ C + + +F++M E + +++ +HG+LEE
Sbjct: 351 KVRPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEE 410
Query: 162 ATRLFEQMP 170
A L MP
Sbjct: 411 AMDLINSMP 419
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 201/553 (36%), Positives = 315/553 (56%), Gaps = 52/553 (9%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
+DV +++ Y + +++ + +F M VKN+VSW ++AG N + A F M
Sbjct: 125 EDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQM 184
Query: 139 P----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY----TAMLDGFMKKGEV 190
+ N T+ A++ G G +E+ ++ + + + S +M++ + K V
Sbjct: 185 QLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMV 244
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------------- 231
A+A+ D M +N VSW MI G+V N EA ELFYRM
Sbjct: 245 SDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLC 304
Query: 232 --------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP-KDCV 270
D+D N+ TA++ + K +++A LF + ++ V
Sbjct: 305 ANIKEMSFAKQLHCQVIKNGSDFDLNI--KTALMVAYSKCSEIDDAFKLFCMMHGVQNVV 362
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSA-LQLLNEGRQSHV 328
S+ A+I+GY QNG + A+ LF M + + ++P++ T SV AC+A + +G+Q H
Sbjct: 363 SWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHS 422
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
I++GF + V +A++TMY++ G I + F++ +LVSWN++I+ +AQHG +K
Sbjct: 423 CSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKK 482
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
+L F +M + DGITF+ ++SAC HAG VNE F+LMVK Y I+P+ EHY+C+V
Sbjct: 483 SLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMV 542
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
D+ SRAG LEKA + MPF A +W +LLAAC ++LNV+LGELAA+K+ L PQ+SA
Sbjct: 543 DLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSA 602
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDK 568
YV+LSN+YA AG W++ +VR LM + V K+ YSWIE+ NK F+ GD+SHP D+
Sbjct: 603 AYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDR 662
Query: 569 IHLELKRASVQMK 581
I+L+L+ S+++K
Sbjct: 663 IYLKLEELSIRLK 675
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+++ LF+ + N ++ +++N +EAL LF G+ + D ++L V C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L G+Q H I+ GF +VSV +++ MY + + D E F ++ N+VSW +
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
++A + Q+G E+AL FSQM L G P+ TF ++L G V + + + +++K
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK-S 222
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGEL 494
G+ + +V++ S++ + A + M + W S++A V N L++E EL
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGFVTNGLDLEAFEL 281
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQM 76
F +L + P + +C I+ + + V++A ++ ++ G I +A ++F +
Sbjct: 400 FSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ 459
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAF 132
+D+++WN++I+GY Q+G ++S +F+ M KN+ +++ +I+ C +++
Sbjct: 460 VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQ 519
Query: 133 DYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMP 170
YF M + Y+ M+ + + G LE+A L +MP
Sbjct: 520 RYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMP 562
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 211/658 (32%), Positives = 352/658 (53%), Gaps = 94/658 (14%)
Query: 19 PILRIL-STPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT 77
P+ +L S P+ G H+ +++ F+ N +S +R G++ AR++FD++
Sbjct: 22 PLADLLRSAPNLSGARAAHAR--ILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIP 79
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDR--IDDAFDYF 135
++ ++NA+++ Y + G E++ LF+++P + S+N ++A + R DA +
Sbjct: 80 LRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFL 139
Query: 136 QAM--------------------PERNTAT-------------------YNAMISGFLKH 156
AM E+++ T +A++ + K
Sbjct: 140 AAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKC 199
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDYMSFKNVV 206
R E+A R+F+ MP RNV+S+ +++ + + G V +A L D ++ +V+
Sbjct: 200 ERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVM 259
Query: 207 SW------------------------------TVMITGYVKNERFCEARELFYRMPDYDK 236
S ++ Y K R EAR +F MP +
Sbjct: 260 SACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP--SR 317
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
++ T+++TG+ K +E+A+++F ++ K+ +++N +IA YAQNG EEA+RLF +
Sbjct: 318 SIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLK 377
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF------EANVSVCNAVITMYS 350
+ + P T +V AC + L G+Q+HV V++ GF E++V V N+++ MY
Sbjct: 378 RDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYL 437
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+ G I D F ++ + + VSWN +I +AQ+G + AL F +M + +PD +T +
Sbjct: 438 KTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIG 497
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+LSACGH+G V+E F M + +GI PS +HYTC+VD+L RAG L++A ++ MP E
Sbjct: 498 VLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPME 557
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
D+ +W SLL AC ++ NVELGE A ++ ELDPQNS YV+LSN+YA G W +V RVR
Sbjct: 558 PDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVR 617
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM--KSVDDF 586
MK++GV+KQ SWIEIG K++ FL D HPC ++IH L+ ++M S+D+
Sbjct: 618 RSMKDRGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTLRIIQMEMGRTSIDEI 675
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 207/649 (31%), Positives = 332/649 (51%), Gaps = 116/649 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV A I+ + G I A ++FD + T+D++TW ++ITG ++G +++ NLFQ M
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305
Query: 110 KNI----VSWNCMIAGCIDNDRID-----------------------------------D 130
+ + V++ ++ C + ++ D
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMED 365
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRR------------ 172
A + F + RN ++ AMI+GF +HGR++EA F +M P R
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425
Query: 173 ------------NVIS---------YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
++I TA+L + K G + A + + +S +NVV+W M
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAM 485
Query: 212 ITGYVKNERFCEARELFYRM------PD-------------------------------Y 234
IT YV++E++ A F + P+
Sbjct: 486 ITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGL 545
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ ++ V A+++ F G L +A+ LF + +D VS+N +IAG+ Q+G + A F
Sbjct: 546 ESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKM 605
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + ++PD T + AC++ + L EGR+ H L+ F+ +V V +I+MY++CG
Sbjct: 606 MQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGS 665
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I D+ F ++ N+ SW ++I +AQHG ++AL F QM G PD ITF+ LSA
Sbjct: 666 IEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSA 725
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C HAG + E + F+ M K + I P EHY C+VD+ RAG L +A + M E D+
Sbjct: 726 CAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSR 784
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VWG+LL AC ++LNVEL E AA+K ELDP ++ V+V+LSN+YAAAGMW++V ++R +M
Sbjct: 785 VWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVML 844
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
++GV K+ SWIE+ KVH F D +HP ++IH EL+R ++M+ +
Sbjct: 845 DRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQL 893
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 241/452 (53%), Gaps = 22/452 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N I+ ++ G +A+Q+FD M KDV +WN ++ GY Q+G +E+ L + M
Sbjct: 145 IFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQ 204
Query: 110 KNIV----SWNCMIAGCIDNDRIDDAFDYF----QAMPERNTATYNAMISGFLKHGRLEE 161
++ ++ M+ C D +D + + +A + + A+I+ +K G + +
Sbjct: 205 DSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGD 264
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
AT++F+ +P R+++++T+M+ G + G +A L M + V V++ ++
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324
Query: 218 NERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E + +++ RM + +D ++V TA+++ + K G +E+A +F+ ++ ++ VS+ AM
Sbjct: 325 PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAG+AQ+G +EA F+ MI+ ++P+ T +S+ ACS+ L G+Q +I G+
Sbjct: 385 IAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGY 444
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++ V A+++MY++CG + D+ F +I N+V+WN +I A+ QH Y+ AL F
Sbjct: 445 GSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQA 504
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDL---FELMVKVYGIIPSSEHYTCLVDILS 452
+ G P+ TF S+L+ C K ++S++L ++ G+ LV +
Sbjct: 505 LLKEGIKPNSSTFTSILNVC----KSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
G L A + MP + D W +++A V
Sbjct: 561 NCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFV 591
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 169/329 (51%), Gaps = 38/329 (11%)
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI----SYTAMLDGFMKKGEVDKARAL 196
++T NA+++ K G+ EA ++ E++ ++ +Y+A+L +K
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIK---------- 122
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
FKN+ ER + PD +F+ +I + K G +
Sbjct: 123 -----FKNLGD----------GERIYNHIKKSGVQPD----IFMWNTLINMYAKCGNTIS 163
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A+ +F+ ++ KD S+N ++ GY Q+G+ EEA +L M++ ++PD T VS+ AC+
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD 223
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
+ +++GR+ + L+++ G++ ++ V A+I M+ +CG I D+ F + + +LV+W ++
Sbjct: 224 ARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSM 283
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I A+HG +++A F +M G PD + F+SLL AC H + + + M +V
Sbjct: 284 ITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW 343
Query: 437 IIPSSEHY--TCLVDILSRAGQLEKAWQI 463
+E Y T ++ + ++ G +E A ++
Sbjct: 344 ---DTEIYVGTAILSMYTKCGSMEDALEV 369
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 156/339 (46%), Gaps = 42/339 (12%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
++T +G C G ++F I KD NA++ ++ G EA+++ +
Sbjct: 52 MLTTSFSGRCPKGRC----VVFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSH 105
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+Q T ++ C + L +G + + + ++G + ++ + N +I MY++CG + ++
Sbjct: 106 IQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAK 165
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + ++ SWN ++ + QHG YE+A QM + PD TF+S+L+AC A
Sbjct: 166 QIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADAR 225
Query: 420 KVNESMDLFELMV----------------------------KVYGIIPSSE--HYTCLVD 449
V++ +L+ L++ KV+ +P+ + +T ++
Sbjct: 226 NVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMIT 285
Query: 450 ILSRAGQLEKAWQITQGMPFEA---DTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
L+R G+ ++A + Q M E D + SLL AC +E G+ +M+E+ +
Sbjct: 286 GLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVG-WD 344
Query: 507 SAVYV--MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
+ +YV + ++Y G D V L+K + V A
Sbjct: 345 TEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTA 383
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 184/501 (36%), Positives = 295/501 (58%), Gaps = 3/501 (0%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG-CIDNDRIDDAFDYFQAMPERNT 143
A + ++G L ++ F S P K ++NC++AG R+ DA F +P +
Sbjct: 21 TAAVAAAVRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTPDV 80
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
+YN ++ G + A RLF MP R+V S+ M+ G K G V++A+ + M +
Sbjct: 81 VSYNTLLLCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVR 140
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
N VSW M++G+ + A E F P+ + V + TAM++G+ +G + A FE
Sbjct: 141 NSVSWNAMVSGFACSGDMSTAEEWFRNAPEKEDAV-LWTAMVSGYMDIGNVVKAIKYFEA 199
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNE 322
+ ++ VS+NA++AGY +N A++ALRLF M++ ++QP+ +TL SV CS L L
Sbjct: 200 MPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 259
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+Q H ++ N++V ++++MY +CG + + + F ++H+ ++V+WN +I+ +AQ
Sbjct: 260 GKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQ 319
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG ++A+ F +M G +P+ ITF+ +L+AC H G + + FE M ++YGI P +
Sbjct: 320 HGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVD 379
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HY+C+VD+L RAG+LE+A + MPFE +G+LLAAC + N+E ELAA K+ E
Sbjct: 380 HYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEK 439
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
DPQ++ YV L+N+YA A W DV+RVR MK+ V K YSWIEI +H F D
Sbjct: 440 DPQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRL 499
Query: 563 HPCIDKIHLELKRASVQMKSV 583
HP + IH +L + + +MK +
Sbjct: 500 HPQLYLIHEKLGQLAERMKEM 520
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 224/456 (49%), Gaps = 79/456 (17%)
Query: 54 NAKISALSRA-GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
N ++ +RA G+++ AR LFD++ T DV+++N ++ ++ +G ++ LF SMPV+++
Sbjct: 52 NCLLAGYARAPGRLADARHLFDRIPTPDVVSYNTLLLCHFASGDADGARRLFASMPVRDV 111
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP-R 171
SWN M++G + +++A F AMP RN+ ++NAM+SGF G + A F P +
Sbjct: 112 ASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFACSGDMSTAEEWFRNAPEK 171
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
+ + +TAM+ G+M G V KA + M +N+VSW ++ GYVKN +A LF M
Sbjct: 172 EDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTM 231
Query: 232 -------PD-------------------------------YDKNVFVVTAMITGFCKVGM 253
P+ +N+ V T++++ +CK G
Sbjct: 232 VREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGD 291
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L +A +LF + +D V++NAMI+GYAQ+G +EA+ LF M ++P+ T V V TA
Sbjct: 292 LSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTA 351
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C L + G Q FE + +Y GI P + +
Sbjct: 352 CIHTGLCDFGIQC--------FE-------GMQELY----GI-----------EPRVDHY 381
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV- 432
+ ++ + G E+A+ F M F+P + +LL+AC +V ++++ EL
Sbjct: 382 SCMVDLLCRAGKLERAVDFIRSM---PFEPHPSAYGTLLAAC----RVYKNLEFAELAAG 434
Query: 433 KVYGIIP-SSEHYTCLVDILSRAGQLEKAWQITQGM 467
K+ P S+ Y L +I + A Q + ++ + M
Sbjct: 435 KLIEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWM 470
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++L ++ + V + +S + G +S+A LF +M T+DV+ WNA+I+GY Q+G +E+
Sbjct: 268 MKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAI 327
Query: 102 NLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISG 152
NLF+ M + N +++ ++ CI D F+ M E Y+ M+
Sbjct: 328 NLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDL 387
Query: 153 FLKHGRLEEATRLFEQMP 170
+ G+LE A MP
Sbjct: 388 LCRAGKLERAVDFIRSMP 405
>gi|356510733|ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 649
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/534 (36%), Positives = 297/534 (55%), Gaps = 54/534 (10%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN 125
+ R+LF+ M +D ++WN +I+GY +NG + ++ LF +MP N VS+N +I G + N
Sbjct: 119 VEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYNAVITGFLLN 178
Query: 126 DRIDDAFDYFQAMPERNTAT-------------------------------------YNA 148
++ A +F+ MPE ++ + YN
Sbjct: 179 GDVESAVGFFRTMPEHDSTSLCALISGLVRNGELDLAAGILRECGNGDDGKDDLVHAYNT 238
Query: 149 MISGFLKHGRLEEATRLFEQMP-------------RRNVISYTAMLDGFMKKGEVDKARA 195
+I+G+ + G +EEA RLF+ +P RRNV+S+ +M+ ++K G++ AR
Sbjct: 239 LIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARE 298
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
L D M ++ SW +I+ YV+ EA +LF MP D V ++I+G + G L
Sbjct: 299 LFDRMVERDNCSWNTLISCYVQISNMEEASKLFREMPSPD--VLSWNSIISGLAQKGDLN 356
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A+ FER+ K+ +S+N +IAGY +N + A++LFS M +PD TL SV + +
Sbjct: 357 LAKDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTLSSVISVST 416
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWN 374
L L G+Q H LV + + + N++ITMYSRCG I+D+ F +I ++++WN
Sbjct: 417 GLVDLYLGKQLHQLVTKTVL-PDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWN 475
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I +A HG +AL F M P ITF+S+L+AC HAG V E F+ M+
Sbjct: 476 AMIGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHAGLVEEGWRQFKSMIND 535
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
YGI P EH+ LVDIL R GQL++A + MPF+ D VWG+LL AC ++ NVEL +
Sbjct: 536 YGIEPRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLGACRVHNNVELALV 595
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
AA + L+P++SA YV+L N+YA G W D VR+LM+E+ V KQ YSW++
Sbjct: 596 AADALIRLEPESSAPYVLLYNMYANLGQWDDAESVRVLMEEKNVKKQAGYSWVD 649
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 192/497 (38%), Positives = 287/497 (57%), Gaps = 16/497 (3%)
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
++ LF MP ++ ++W MI G + ND ++ A + F+AM E A +NAMISG++ G
Sbjct: 211 ARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCF 270
Query: 160 EEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYM---------SFKNVV 206
+EA L +M + I+YT ++ G + + Y+ SF V
Sbjct: 271 QEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSV 330
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
S +IT Y KN + EAR++FY MP +N+ A+++G+ G +E A+ FE +
Sbjct: 331 S-NALITLYCKNNKVDEARKIFYAMPV--RNIITWNAILSGYVNAGRMEEAKSFFEEMPV 387
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K+ ++ MI+G AQNG +E L+LF M +P D TACS L L GRQ
Sbjct: 388 KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQL 447
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H ++ G+E+++SV NA+I+MY++CG + +E F + S +LVSWN++IAA QHGH
Sbjct: 448 HAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHG 507
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
KA+ F QM G PD ITFL++L+AC HAG V + F M++ YGI P +HY
Sbjct: 508 VKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYAR 567
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VD+ RAG A + MP + VW +LLA C I+ N++LG AA+++ +L PQN
Sbjct: 568 MVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQN 627
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
YV+LSN+YA G W DV +VR LM++Q V K+ A SWIE+ NKVH F+ D HP +
Sbjct: 628 DGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEV 687
Query: 567 DKIHLELKRASVQMKSV 583
++ L++ ++MK +
Sbjct: 688 LSVYRYLEQLGLEMKKL 704
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 201/483 (41%), Gaps = 88/483 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + ++ + ARQLF+++ D I +IT Y G L+ + +F P+
Sbjct: 52 NRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLY--- 108
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
R++ YNAMI+G+ +G A LF M R +
Sbjct: 109 --------------------------MRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD 142
Query: 174 V----ISYTAMLDGFM-------KKGEVDKARALSDYMSFKNVVSWTVMITGYVKN---- 218
++T++L + + G++ A + M + +++ YVK
Sbjct: 143 FRPDDFTFTSVLSALVLFVGNEQQCGQMHCA-VVKTGMGCVSSSVLNALLSVYVKRASEL 201
Query: 219 ----ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
AR+LF MP D+ T MITG+ + L AR +FE + ++NA
Sbjct: 202 GIPCSAMVSARKLFDEMPKRDE--LTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNA 259
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI+GY G +EAL L M + +Q DD T ++ +AC+ + G+Q H +++N
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNE 319
Query: 335 FEANVSVC----NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF---------- 380
N S C NA+IT+Y + + ++ F + N+++WN I++ +
Sbjct: 320 LNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAK 379
Query: 381 ---------------------AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
AQ+G ++ L F QM L+GF+P F L+AC G
Sbjct: 380 SFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLG 439
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ L +V + G S ++ + ++ G +E A + MP D W S+
Sbjct: 440 ALENGRQLHAQLVHL-GYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSM 497
Query: 480 LAA 482
+AA
Sbjct: 498 IAA 500
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 217/482 (45%), Gaps = 97/482 (20%)
Query: 37 SSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
SS+ L L S V+V A + + +SA R+LFD+M +D +TW +ITGY +N
Sbjct: 183 SSSVLNALLS---VYVKRASELGIPCSAMVSA-RKLFDEMPKRDELTWTTMITGYVRNDD 238
Query: 97 LQESKNLFQSMPVKNI-VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATY----- 146
L ++ +F++M V+N+ +WN MI+G + +A + M + + TY
Sbjct: 239 LNGAREVFEAM-VENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIIS 297
Query: 147 ----------------------------------NAMISGFLKHGRLEEATRLFEQMPRR 172
NA+I+ + K+ +++EA ++F MP R
Sbjct: 298 ACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR 357
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
N+I++ A+L G++ G +++A++ + M KN+++ TVMI+G +N E +LF +M
Sbjct: 358 NIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR 417
Query: 233 -------------------------------------DYDKNVFVVTAMITGFCKVGMLE 255
Y+ ++ V AMI+ + K G++E
Sbjct: 418 LDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVE 477
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A +F + D VS+N+MIA Q+G +A+ LF M+K + PD T ++V TACS
Sbjct: 478 AAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACS 537
Query: 316 ALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSW 373
L+ +GR ++ + G ++ ++ R G + + + S P W
Sbjct: 538 HAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVW 597
Query: 374 NTIIAAFAQHGHY----EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
++A HG+ E A F M N DG T++ L + G+ N+ + +
Sbjct: 598 EALLAGCRIHGNMDLGIEAAEQLFKLMPQN----DG-TYVLLSNIYADVGRWNDVAKVRK 652
Query: 430 LM 431
LM
Sbjct: 653 LM 654
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 156/390 (40%), Gaps = 96/390 (24%)
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
+L+ + K V AR L + + + ++ T +IT Y RE+F P Y ++
Sbjct: 54 LLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSV 113
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
AMITG YA NG AL LF M + D
Sbjct: 114 FYNAMITG-------------------------------YAHNGDGHSALELFRAMRRDD 142
Query: 300 MQPDDATLVSVFTACSALQLLNEGR--QSHVLVIRNGFE-ANVSVCNAVITMYSR----- 351
+PDD T SV +A L + NE + Q H V++ G + SV NA++++Y +
Sbjct: 143 FRPDDFTFTSVLSAL-VLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASEL 201
Query: 352 ---CGGILDSELAFRQIHSPNLVSWNTIIAAFAQH------------------------- 383
C ++ + F ++ + ++W T+I + ++
Sbjct: 202 GIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMI 261
Query: 384 ------GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
G +++AL +M G D IT+ +++SAC + G F++ +++
Sbjct: 262 SGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGS-------FQMGKQMHAY 314
Query: 438 IPSSE----HYTC------LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
I +E H C L+ + + ++++A +I MP + W ++L+ V
Sbjct: 315 ILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSGYV--- 370
Query: 488 NVELGELAAKKMRELDPQN-SAVYVMLSNL 516
N E A E+ +N + VM+S L
Sbjct: 371 NAGRMEEAKSFFEEMPVKNLLTLTVMISGL 400
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
R H +I +GF+ N ++ MY + ++ + F +I +P+ ++ T+I A+
Sbjct: 32 ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCA 91
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
G+ E F+ L + D + + ++++ H G + +++LF M +
Sbjct: 92 LGNLELGREIFNGTPL--YMRDSVFYNAMITGYAHNGDGHSALELFRAMRR 140
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 310/541 (57%), Gaps = 10/541 (1%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
LF F++N + ++ GK+ A+ LFD+M +D+ +WNA+++ Y ++G +Q K
Sbjct: 51 HLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKA 110
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGR 158
F MP ++ VS+N IAG N ++ + F+ M E T ++++ +
Sbjct: 111 TFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSD 170
Query: 159 LEEATRLFEQMPRRN----VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
L ++ + RN V + A+ D + K GE+++AR L D ++ KN+VSW +MI+G
Sbjct: 171 LRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISG 230
Query: 215 YVKNERFCEARELFY--RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
Y KN + + L + R+ + + ++ +I +C+ G ++ AR +F + KD V +
Sbjct: 231 YAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCW 290
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
AM+ GYA+NG E+AL LF+ M+ ++PD TL SV ++C+ L L+ G+ H I
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSIL 350
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
G N+ V +A+I MYS+CG I D+ F + + N+VSWN +I AQ+GH + AL
Sbjct: 351 AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALEL 410
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F M F PD +TF+ +LSAC H + + + F+ + +G+ P+ +HY C+V++L
Sbjct: 411 FENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLG 470
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
R G++E+A + + M + D +W +LL+ C ++ E+AA+ + ELDP + Y+M
Sbjct: 471 RTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIM 530
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
LSN+YA+ G W+DV VR LMK + V K +SWIEI N+VH F D +HP + I+ +
Sbjct: 531 LSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEK 590
Query: 573 L 573
L
Sbjct: 591 L 591
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 317/542 (58%), Gaps = 14/542 (2%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI- 112
NA ++ R G I A+ +F+ +D+I+WN++I G+ Q+G + + LF M + +
Sbjct: 525 NALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLE 584
Query: 113 ---VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRL 165
+++ ++ GC + + ++ + E + NA+I+ +++ G L++A +
Sbjct: 585 PDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEV 644
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVS-WTVMITGYVKNERF 221
F + RNV+S+TAM+ GF +GE KA L M FK V S ++ ++ + +
Sbjct: 645 FHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACL 704
Query: 222 CEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
E +++ + Y+ + V A+I+ + K G + +AR +F+++ +D +S+N MIAGY
Sbjct: 705 DEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGY 764
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
AQNG+ AL+ M + + + + VS+ ACS+ L EG++ H +++ + +V
Sbjct: 765 AQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDV 824
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
V A+I+MY++CG + +++ F N+V+WN +I A+AQHG KAL FF+ M
Sbjct: 825 RVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKE 884
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
G PDG TF S+LSAC H+G V E +F + +G+ P+ EHY CLV +L RAG+ ++
Sbjct: 885 GIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQE 944
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
A + MPF D VW +LL AC I+ NV L E AA +L+ +N AVYV+LSN+YAA
Sbjct: 945 AETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAA 1004
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQ 579
AG W DV ++R +M+ +G+ K+ SWIE+ N +H F+ D SHP +I+ ELKR S++
Sbjct: 1005 AGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLE 1064
Query: 580 MK 581
M+
Sbjct: 1065 ME 1066
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 218/451 (48%), Gaps = 16/451 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+ V A + R G ++ A+Q + +DV+ +NA+I Q+G +E+ + M
Sbjct: 319 IRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS 378
Query: 109 ---VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEE 161
V N ++ ++ C + + + E + N++IS + + G L
Sbjct: 379 DGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPR 438
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A LF MP+R++IS+ A++ G+ ++ + +A L M + V V++ +++
Sbjct: 439 ARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTN 498
Query: 218 NERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ + + + + + N + A++ + + G + A+ +FE + +D +S+N+M
Sbjct: 499 SSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSM 558
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAG+AQ+G E A +LF M K ++PD T SV C + L GRQ H+L+I +G
Sbjct: 559 IAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGL 618
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ +V++ NA+I MY RCG + D+ F + N++SW +I FA G KA F Q
Sbjct: 619 QLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQ 678
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M +GF P TF S+L AC + ++E + ++ G + L+ S++G
Sbjct: 679 MQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNS-GYELDTGVGNALISAYSKSG 737
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ A ++ MP D W ++A N
Sbjct: 738 SMTDARKVFDKMP-NRDIMSWNKMIAGYAQN 767
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 222/447 (49%), Gaps = 16/447 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F++N I+ + +S A Q+F +M +DVI+WN++I+ Y Q GF +++ LF+ M
Sbjct: 117 IFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQT 176
Query: 109 ---VKNIVSWNCMIAGCIDNDRIDDA----FDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ + +++ ++ C ++ +A +R+ N++++ + K L
Sbjct: 177 AGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPS 236
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A ++F + RR+V+SY ML + +K V++ L MS + + V++ ++ +
Sbjct: 237 ARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTT 296
Query: 218 NERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E + + + + ++ V TA+ T F + G + A+ E +D V +NA+
Sbjct: 297 PSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNAL 356
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IA AQ+G EEA + M + + T +SV ACS + L G H + G
Sbjct: 357 IAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGH 416
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++V + N++I+MY+RCG + + F + +L+SWN IIA +A+ +A+ + Q
Sbjct: 417 SSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQ 476
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G P +TFL LLSAC ++ ++ + E +++ GI + L+++ R G
Sbjct: 477 MQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCG 535
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
+ +A + +G D W S++A
Sbjct: 536 SIMEAQNVFEGTRAR-DIISWNSMIAG 561
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 193/392 (49%), Gaps = 13/392 (3%)
Query: 102 NLFQSMPVK-NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT----YNAMISGFLKH 156
N +Q P + N ++ ++ C + +A M E N +I+ ++K
Sbjct: 71 NAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKC 130
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS----FKNVVSWTVMI 212
+ +A ++F +MPRR+VIS+ +++ + ++G KA L + M + +++ ++
Sbjct: 131 RSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISIL 190
Query: 213 TGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
T +++ ++ + Y ++ V +++ + K L +AR +F I +D V
Sbjct: 191 TACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVV 250
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+N M+ YAQ EE + LF M + PD T +++ A + +L+EG++ H L
Sbjct: 251 SYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLA 310
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+ G +++ V A+ TM+ RCG + ++ A ++V +N +IAA AQHGHYE+A
Sbjct: 311 VNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAF 370
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
+ QM +G + T+LS+L+AC K + +L + G + L+ +
Sbjct: 371 EQYYQMRSDGVVMNRTTYLSVLNACS-TSKALGAGELIHSHISEVGHSSDVQIGNSLISM 429
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+R G L +A ++ MP + D W +++A
Sbjct: 430 YARCGDLPRARELFNTMP-KRDLISWNAIIAG 460
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 175/353 (49%), Gaps = 18/353 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V + NA I+ R G + A ++F + ++V++W A+I G+ G +++ LF M
Sbjct: 622 VNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQN 681
Query: 108 ----PVKNIVS---WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
PVK+ S CM + C+D + A + E +T NA+IS + K G +
Sbjct: 682 DGFKPVKSTFSSILKACMSSACLDEGKKVIAH-ILNSGYELDTGVGNALISAYSKSGSMT 740
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGYV 216
+A ++F++MP R+++S+ M+ G+ + G A + M + VV S+ ++
Sbjct: 741 DARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACS 800
Query: 217 KNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
E + + + +V V A+I+ + K G LE A+ +F+ K+ V++NA
Sbjct: 801 SFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNA 860
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRN 333
MI YAQ+G+A +AL F+ M K ++PD +T S+ +AC+ L+ EG R L ++
Sbjct: 861 MINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQH 920
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGH 385
G + ++ + R G ++E Q+ P+ W T++ A HG+
Sbjct: 921 GLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGN 973
>gi|147859671|emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]
Length = 833
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 193/564 (34%), Positives = 308/564 (54%), Gaps = 51/564 (9%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N I+ L + G I+ A ++F +M +DV++WN++I+GY NG + E+ +F M +
Sbjct: 257 IFSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVL 316
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K++VSWN +IAG + ++D A ++F+ M R+ A++ MISG GR+ EA LFE M
Sbjct: 317 KDVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLFEDM 376
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P R+V ++ M+ G+++ G ++ L M ++ SW MI G V+N+R A LF
Sbjct: 377 PVRDVRAWNTMIAGYLENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQNAMRLFV 436
Query: 230 RMPD-----YDKNVFVV------------------------TAMITGFCKVGMLENARLL 260
MP ++ VF + T +I G+ + G ++ A +
Sbjct: 437 EMPQKCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSI 496
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
FE + +D ++N +I G +N EE L+ F M + PD+AT SV T CS L L
Sbjct: 497 FELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTL 556
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+ GRQ H V + GF V+V NA++T+Y+RCG + L F + S +++SWN+II
Sbjct: 557 HLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSSMTSHDVISWNSIICGL 616
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A +G+ +A+ F +M P+ ITF+ +LSAC HAG V++ F+ M + P+
Sbjct: 617 AHNGNGVEAIEMFEKMRSTDIKPNRITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPT 676
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMP---FEADTGVWGSLLAACVINLNVELGELAAK 497
EHYTC+VD+L R G +++A + M E VWG++L AC I+ N+++GE+A +
Sbjct: 677 IEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNIQVGEIAGE 736
Query: 498 KMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
++ E++P N G D RV + M+E+GV KQ A SW+E+ H FL
Sbjct: 737 RILEIEPHN------------FCGKREDAERVWVRMREKGVKKQPACSWMEVNGSGHVFL 784
Query: 558 GGDMSHPCIDKI-------HLELK 574
GD SHP ++ H+E++
Sbjct: 785 SGDSSHPQFSRVCGVLGLLHMEME 808
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 241/476 (50%), Gaps = 25/476 (5%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N++IS R G A+ LFD+M ++ +T+NA+I GY+QNG E +LF MP ++I
Sbjct: 199 NSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDIF 258
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
S+N MIAG + I+ A + FQ MP R+ ++N+MISG++ +G + EA R+F M ++
Sbjct: 259 SYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVLKD 318
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V+S+ ++ G + G+VD A M +++ SWT MI+G R EAR LF MP
Sbjct: 319 VVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLFEDMPV 378
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D V MI G+ + G +E +LF+++ +D S+N MI G +N + A+RLF
Sbjct: 379 RD--VRAWNTMIAGYLENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQNAMRLF- 435
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEG--RQSHVLVIRNGFEANVSVCNAVITMYSR 351
++M + + VF L+ G +++H + ++ F VS N ++ Y
Sbjct: 436 --VEMPQKCRRSWNSIVFG------LIRNGLIKEAHAFLEKSPFSDTVSWTNLIVG-YFE 486
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G + + F + + + +WN II ++ H E+ L FF +M G PD TF S+
Sbjct: 487 TGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSV 546
Query: 412 LSACGHAGKVNESMDLFELMVKV---YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
L+ C ++ + + K Y + S+ +V + +R G A + M
Sbjct: 547 LTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSN----AMVTLYARCGNSNSALLLFSSMT 602
Query: 469 FEADTGVWGSLLAACVINLN-VELGELAAKKMRELDPQ-NSAVYVMLSNLYAAAGM 522
D W S++ N N VE E+ +KMR D + N +V + + + AG+
Sbjct: 603 -SHDVISWNSIICGLAHNGNGVEAIEM-FEKMRSTDIKPNRITFVGVLSACSHAGL 656
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
+V V+NA ++ +R G ++A LF MT+ DVI+WN+II G NG E+ +F+ M
Sbjct: 574 FVAVSNAMVTLYARCGNSNSALLLFSSMTSHDVISWNSIICGLAHNGNGVEAIEMFEKMR 633
Query: 109 VKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRL 159
+I +++ +++ C +D YF M E Y ++ + G +
Sbjct: 634 STDIKPNRITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLI 693
Query: 160 EEATRLFEQMPRRNV 174
+EA QM V
Sbjct: 694 DEAMSFLRQMEANGV 708
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/518 (37%), Positives = 298/518 (57%), Gaps = 17/518 (3%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMP--VKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
D NA+I Y + G + ++ +F +P + + WN M++G + A F
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
MPERN T+ AM++G+ K LE A R F+ MP R+V+S+ AML G+ + G ++A L
Sbjct: 189 MPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLF 248
Query: 198 DYMSFKNV----VSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKV 251
D M + +W +I+ C A L + N FV TA++ + K
Sbjct: 249 DEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKF 308
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSV 310
G L++AR LF + ++ V++N+MIAGYAQNG + A+ LF MI + PD+ T+VSV
Sbjct: 309 GDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSV 368
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
+AC L L G + N + ++S NA+I MYSRCG + D++ F+++ + ++
Sbjct: 369 ISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDV 428
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
VS+NT+I+ FA HGH +A+ S M G +PD +TF+ +L+AC HAG + E +FE
Sbjct: 429 VSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFES 488
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
+ P+ +HY C+VD+L R G+LE A + + MP E GV+GSLL A I+ VE
Sbjct: 489 IKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVE 543
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
LGELAA K+ EL+P NS +++LSN+YA+AG W+DV R+R MK+ GV K +SW+E G
Sbjct: 544 LGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYG 603
Query: 551 NKVHYFLGGDMSHPCIDKIH---LELKRASVQMKSVDD 585
K+H F+ D SH D I+ +EL++ + + D
Sbjct: 604 GKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIAD 641
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 227/508 (44%), Gaps = 123/508 (24%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT--TKDVITWNAIITGYWQNGFLQ 98
+++L FV NA I +R G I AR++FD++ + V WNA+++GYW+
Sbjct: 121 VLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEG 180
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
+++ LF MP +N+++W M+ G ++ A YF MPER+ ++NAM+SG+ ++G
Sbjct: 181 QAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGL 240
Query: 159 LEEATRLFEQMP---------------------------------------RRNVISYTA 179
EEA RLF++M + N TA
Sbjct: 241 AEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTA 300
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------P 232
+LD + K G++D AR L + M +NVV+W MI GY +N + A ELF M P
Sbjct: 301 LLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTP 360
Query: 233 DYDKNVFVVT-------------------------------AMITGFCKVGMLENARLLF 261
D V V++ AMI + + G +E+A+ +F
Sbjct: 361 DEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVF 420
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ + +D VS+N +I+G+A +G EA+ L S M + ++PD T + V TACS LL
Sbjct: 421 QEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLE 480
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
EGR+ F I P + + ++
Sbjct: 481 EGRK-----------------------------------VFESIKDPAIDHYACMVDLLG 505
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP- 439
+ G E A +M + +P + SLL+ A ++++ ++L EL K++ + P
Sbjct: 506 RVGELEDAKRTMERMPM---EPHAGVYGSLLN----ASRIHKQVELGELAANKLFELEPD 558
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGM 467
+S ++ L +I + AG+ + +I + M
Sbjct: 559 NSGNFILLSNIYASAGRWKDVERIREAM 586
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/542 (35%), Positives = 307/542 (56%), Gaps = 15/542 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ NA + ++ G++ AR LF+QM + + WN++I+G W++G E+ LF MP +
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR 190
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
NI++W M+ G ++ A YF MPER+ ++NAM S + + +EA LF QM
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250
Query: 171 RRNVI----SYTAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGYVKNERFC 222
+ ++ + G+ A ++ + K++V T ++ + K
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
AR +F + +N MI+ + +VG L AR LF+ + +D VS+N+MIAGYAQN
Sbjct: 311 IARNIFDELGS-QRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQN 369
Query: 283 GVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
G + ++ LF MI MD+QPD+ T+ SV +AC + L +V + +S
Sbjct: 370 GESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISG 429
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
N++I MYS+CG + D+ F+ + + ++VS+NT+I+ FA +GH ++A+ M G
Sbjct: 430 FNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGI 489
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
+PD +T++ +L+AC HAG +NE ++F+ + P+ +HY C+VD+L RAG+L++A
Sbjct: 490 EPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAK 544
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
+ Q MP + GV+GSLL A I+ V LGELAA K+ EL+PQN YV+LSN+YA+ G
Sbjct: 545 MLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFG 604
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
W DV RVR +MK+ G+ K SW+E +VH F GD SH I+ L +MK
Sbjct: 605 RWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMK 664
Query: 582 SV 583
V
Sbjct: 665 RV 666
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 210/476 (44%), Gaps = 91/476 (19%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L + + + + ++ ++ G + +AR+ FD+M + V++WNA+ + Y Q +E+
Sbjct: 183 LFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEA 242
Query: 101 KNLFQSMPVKNI----VSWNCMIAGC--IDNDRIDDAFDYF--QAMPERNTATYNAMISG 152
NLF M + I +W I+ C I + + D+ Q N+ A++
Sbjct: 243 LNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDM 302
Query: 153 FLKHGRLEEATRLFEQM-PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
K G LE A +F+++ +RN +++ M+ + + G++ AR L D M ++VVSW M
Sbjct: 303 HAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSM 362
Query: 212 ITGYVKNERFCEARELFYRM-------PD---------------------------YDKN 237
I GY +N + ELF M PD +KN
Sbjct: 363 IAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKN 422
Query: 238 VFV----VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ + ++I + K G + +A +F+ + +D VSFN +I+G+A NG +EA++L
Sbjct: 423 IKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVL 482
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + ++PD T + V TACS LLNEG+
Sbjct: 483 TMEEEGIEPDHVTYIGVLTACSHAGLLNEGKN---------------------------- 514
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
F+ I +P + + ++ + G ++A + M + P + SLL+
Sbjct: 515 -------VFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMK---PHAGVYGSLLN 564
Query: 414 ACGHAGKVNESMDLFELMV-KVYGIIPSS-EHYTCLVDILSRAGQLEKAWQITQGM 467
A ++++ + L EL K++ + P + +Y L +I + G+ E ++ + M
Sbjct: 565 ----ASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMM 616
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F D ++ M+ Y++ G + + LF ++++P + +
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG---- 111
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
G H V++ G + + NA++ MY++ G + + F Q+ L WN++I+
Sbjct: 112 -KSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ G+ +A++ F+ M IT+ S+++ G + + F+ M
Sbjct: 171 CWKSGNETEAVVLFNMMPARNI----ITWTSMVTGYAKMGDLESARRYFDEM 218
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/542 (35%), Positives = 307/542 (56%), Gaps = 15/542 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ NA + ++ G++ AR LF+QM + + WN++I+G W++G E+ LF MP +
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR 190
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
NI++W M+ G ++ A YF MPER+ ++NAM S + + +EA LF QM
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250
Query: 171 RRNVI----SYTAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGYVKNERFC 222
+ ++ + G+ A ++ + K++V T ++ + K
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
AR +F + +N MI+ + +VG L AR LF+ + +D VS+N+MIAGYAQN
Sbjct: 311 IARNIFDELGS-QRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQN 369
Query: 283 GVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
G + ++ LF MI MD+QPD+ T+ SV +AC + L +V + +S
Sbjct: 370 GESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISG 429
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
N++I MYS+CG + D+ F+ + + ++VS+NT+I+ FA +GH ++A+ M G
Sbjct: 430 FNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGI 489
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
+PD +T++ +L+AC HAG +NE ++F+ + P+ +HY C+VD+L RAG+L++A
Sbjct: 490 EPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAK 544
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
+ Q MP + GV+GSLL A I+ V LGELAA K+ EL+PQN YV+LSN+YA+ G
Sbjct: 545 MLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFG 604
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
W DV RVR +MK+ G+ K SW+E +VH F GD SH I+ L +MK
Sbjct: 605 RWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMK 664
Query: 582 SV 583
V
Sbjct: 665 RV 666
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 210/476 (44%), Gaps = 91/476 (19%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L + + + + ++ ++ G + +AR+ FD+M + V++WNA+ + Y Q +E+
Sbjct: 183 LFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEA 242
Query: 101 KNLFQSMPVKNI----VSWNCMIAGC--IDNDRIDDAFDYF--QAMPERNTATYNAMISG 152
NLF M + I +W I+ C I + + D+ Q N+ A++
Sbjct: 243 LNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDM 302
Query: 153 FLKHGRLEEATRLFEQM-PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
K G LE A +F+++ +RN +++ M+ + + G++ AR L D M ++VVSW M
Sbjct: 303 HAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSM 362
Query: 212 ITGYVKNERFCEARELFYRM-------PD---------------------------YDKN 237
I GY +N + ELF M PD +KN
Sbjct: 363 IAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKN 422
Query: 238 VFV----VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ + ++I + K G + +A +F+ + +D VSFN +I+G+A NG +EA++L
Sbjct: 423 IKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVL 482
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + ++PD T + V TACS LLNEG+
Sbjct: 483 TMEEEGIEPDHVTYIGVLTACSHAGLLNEGKN---------------------------- 514
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
F+ I +P + + ++ + G ++A + M + P + SLL+
Sbjct: 515 -------VFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMK---PHAGVYGSLLN 564
Query: 414 ACGHAGKVNESMDLFELMV-KVYGIIPSS-EHYTCLVDILSRAGQLEKAWQITQGM 467
A ++++ + L EL K++ + P + +Y L +I + G+ E ++ + M
Sbjct: 565 ----ASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMM 616
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F D ++ M+ Y++ G + + LF ++++P + +
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG---- 111
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
G H V++ G + + NA++ MY++ G + + F Q+ L WN++I+
Sbjct: 112 -KSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ G+ +A++ F+ M IT+ S+++ G + + F+ M
Sbjct: 171 CWKSGNETEAVVLFNMMPARNI----ITWTSMVTGYAKMGDLESARRYFDEM 218
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 315/556 (56%), Gaps = 16/556 (2%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+ +L Y V N+ IS K+ A++LFD++T +DVI+WN++I+GY +NG
Sbjct: 277 ICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRG 336
Query: 101 KNLFQSMPVKNI---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
+F M V + V C G + ++ ++ A +R N ++
Sbjct: 337 IEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLD 396
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ K G L A R+FE+M + V+S+T+M+ G++++G D A L D M + VV
Sbjct: 397 MYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYA 456
Query: 212 ITGYVK------NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+T + N + + + R + + N FV A+ + K G +++A +F ++
Sbjct: 457 VTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK 516
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
KD +S+N MI GY +N + EAL LF+ M + + +PD T+ + AC++L L++GR+
Sbjct: 517 KKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDGTTVACILPACASLAALDKGRE 575
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H +RNG+ + V NAV+ MY +CG ++ + F I + +LVSW +IA + HG+
Sbjct: 576 IHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGY 635
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+A+ F+QM + G +PD ++F+S+L AC H+G ++E +F +M K I P+ EHY
Sbjct: 636 GSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYA 695
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C+VD+L+R G L KA + + MP + D +WG+LL C I+ +V+L E A+++ EL+P+
Sbjct: 696 CMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPE 755
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
N+ YV+L+N+YA A W +V ++R + ++G+ K SWIEI K++ F+ GD S P
Sbjct: 756 NTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQ 815
Query: 566 IDKIHLELKRASVQMK 581
KI L LKR +MK
Sbjct: 816 AKKIELLLKRLRSKMK 831
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 190/391 (48%), Gaps = 36/391 (9%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---PVK-NIVSWNC 117
+ G + R +FD+++ + WN +I+ Y +G ES NLF+ M +K N +++
Sbjct: 197 KCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSS 256
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLEEATRLFEQMPRRN 173
++ R+++ + + +Y N++IS + ++ A +LF+++ R+
Sbjct: 257 ILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRD 316
Query: 174 VISYTAMLDGFMKKG-----------------EVDKARALSDYMSFKNVVSWTVMITGYV 216
VIS+ +M+ G++K G ++D A ++ +++ N+ ++ G V
Sbjct: 317 VISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANI---GTLLLGKV 373
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
+ +A L D+ V ++ + K G L +A +FER+ K VS+ +MI
Sbjct: 374 LHSYSIKAATL-------DREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMI 426
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
GY + G+++ A++LF M + PD + S+ AC+ L G+ H + N E
Sbjct: 427 TGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLE 486
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
N V NA+ MY++CG + D+ F + +++SWNT+I + ++ +AL F++M
Sbjct: 487 TNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM 546
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
PDG T +L AC +++ ++
Sbjct: 547 QRES-KPDGTTVACILPACASLAALDKGREI 576
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 154/326 (47%), Gaps = 35/326 (10%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K G L+ R++F+++ +N MI+ Y+ +G E++ LF M+++ ++P+ T
Sbjct: 195 YVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTF 254
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
S+ +A+ + EGRQ H L+ + GF + +V N++I+ Y + ++ F ++
Sbjct: 255 SSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTD 314
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+++SWN++I+ + ++G ++ + F +M + G D D T +++ AC + G + L
Sbjct: 315 RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVL 374
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA---------------- 471
+K + L+D+ S+ G L A ++ + M +
Sbjct: 375 HSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGL 434
Query: 472 ------------------DTGVWGSLLAACVINLNVELGELAAKKMRELDPQ-NSAVYVM 512
D S+L AC IN N++ G++ +RE + + NS V
Sbjct: 435 SDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNA 494
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGV 538
L+++YA G +D V MK++ V
Sbjct: 495 LTDMYAKCGSMKDAHDVFSHMKKKDV 520
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 63/132 (47%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D S+ C+ + + +GR+ ++ +G + + ++ MY +CG + + + F
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
++ + WN +I+ ++ G+Y +++ F QM G P+ TF S+L +V
Sbjct: 209 DKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVE 268
Query: 423 ESMDLFELMVKV 434
E + L+ K+
Sbjct: 269 EGRQVHGLICKL 280
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/442 (42%), Positives = 275/442 (62%), Gaps = 9/442 (2%)
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
M R A +NAM+SG+ K +A LF+ MP RNVI++TAM+ G+ K +++ AR
Sbjct: 69 MYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYF 128
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENA 257
D M ++VVSW M++GY +N EA LF M +N AMI+ + +VG L++A
Sbjct: 129 DCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSA 188
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSA 316
R LF + ++ V++N+MIAGYAQNG + A+ LF MI + PD+ T+VSV +AC
Sbjct: 189 RKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGH 248
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L G + N + ++S NA+I MYSRCG + D++ F+++ + ++VS+NT+
Sbjct: 249 LGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTL 308
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I+ FA HGH +A+ S M G +PD +TF+ +L+AC HAG + E +FE +
Sbjct: 309 ISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD--- 365
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
P+ +HY C+VD+L R G+LE A + + MP E GV+GSLL A I+ VELGELAA
Sbjct: 366 --PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAA 423
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
K+ EL+P NS +++LSN+YA+AG W+DV R+R MK+ GV K +SW+E G K+H F
Sbjct: 424 NKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKF 483
Query: 557 LGGDMSHPCIDKIH---LELKR 575
+ D SH D I+ +EL++
Sbjct: 484 IVADRSHERSDDIYQLLIELRK 505
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 212/446 (47%), Gaps = 84/446 (18%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G + R M + V WNA+++GYW+ +++ LF MP +N+++W M+ G
Sbjct: 57 GSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYA 116
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM--PRRNVISYTAML 181
++ A YF MPER+ ++NAM+SG+ ++G EEA RLF++M RN +++ AM+
Sbjct: 117 KVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMI 176
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------PDY 234
+M+ G++D AR L + M +NVV+W MI GY +N + A ELF M PD
Sbjct: 177 SAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDE 236
Query: 235 DKNVFVVT-------------------------------AMITGFCKVGMLENARLLFER 263
V V++ AMI + + G +E+A+ +F+
Sbjct: 237 VTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQE 296
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ +D VS+N +I+G+A +G EA+ L S M + ++PD T + V TACS LL EG
Sbjct: 297 MATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEG 356
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
R+ F I P + + ++ +
Sbjct: 357 RK-----------------------------------VFESIKDPAIDHYACMVDLLGRV 381
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP-SS 441
G E A +M + +P + SLL+A ++++ ++L EL K++ + P +S
Sbjct: 382 GELEDAKRTMERMPM---EPHAGVYGSLLNAS----RIHKQVELGELAANKLFELEPDNS 434
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGM 467
++ L +I + AG+ + +I + M
Sbjct: 435 GNFILLSNIYASAGRWKDVERIREAM 460
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 7 FHQTYLKRILFPPILRILSTPDSCGNFTP-HSSNCLIRLFSTQYVFV----NNAKISALS 61
F + + L P + ++S +CG+ N ++R + + + +NA I S
Sbjct: 223 FKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYS 282
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNC 117
R G + A+++F +M T+DV+++N +I+G+ +G E+ NL +M I V++
Sbjct: 283 RCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIG 342
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
++ C +++ F+++ + Y M+ + G LE+A R E+MP
Sbjct: 343 VLTACSHAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMP 395
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 28/180 (15%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD----------------SELAFRQIH 366
G +HVL + +G +A V NAVI MY+R + D ++ F +
Sbjct: 46 GFHAHVLKLGHGSDAFVR--NAVIDMYAR--KVADWNAMVSGYWKWESEGQAQWLFDVMP 101
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
N+++W ++ +A+ E A +F M + +++ ++LS G E++
Sbjct: 102 ERNVITWTAMVTGYAKVKDLEAARRYFDCMP----ERSVVSWNAMLSGYAQNGLAEEALR 157
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LF+ M+ Y +S + ++ R G L+ A ++ MP + W S++A N
Sbjct: 158 LFDEMLGAY---RNSVTWNAMISAYMRVGDLDSARKLFNTMPGR-NVVTWNSMIAGYAQN 213
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 333/620 (53%), Gaps = 78/620 (12%)
Query: 39 NCLI-RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CLI + F++N I+A + G ++ A +FD + ++ +WN I++ Y + G L
Sbjct: 28 HCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLL 87
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAM--- 149
+ + +F MP ++ VSWN I+G + DA ++ M + N T++ M
Sbjct: 88 SQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLIL 147
Query: 150 ------------ISG--------------------FLKHGRLEEATRLFEQMPRRNVISY 177
I+G + K G + +A R F++MP RNV+
Sbjct: 148 CSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMC 207
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------ 231
M+ G M+ G +++++ L + ++ +SWT+MITG ++N EA ++F M
Sbjct: 208 NTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFA 267
Query: 232 -------------------------------PDYDKNVFVVTAMITGFCKVGMLENARLL 260
D+ NVFV +A++ + K +++A +
Sbjct: 268 MDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETV 327
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+R+ K+ +S+ AM+ GY QNG +EEA+++F M + ++PDD TL SV ++C+ L L
Sbjct: 328 FKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASL 387
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
EG Q H + +G + ++V NA+IT+Y +CG +S F +++ + VSW ++A +
Sbjct: 388 EEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGY 447
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
AQ G + + F +M +G PDG+TF+ +LSAC AG V + + FE M+K +GI+P
Sbjct: 448 AQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPI 507
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
+H TC++D+L RAG+LE+A MP D W +LL++C ++ ++E+G+ AA +
Sbjct: 508 VDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLI 567
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
L+PQN A YV+LS+LYA+ G W V ++R M+++ V K+ YSWI+ KVH F D
Sbjct: 568 ALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADD 627
Query: 561 MSHPCIDKIHLELKRASVQM 580
S P + +I+ EL++ + +M
Sbjct: 628 QSSPFLGQIYAELEKLNYKM 647
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 195/423 (46%), Gaps = 48/423 (11%)
Query: 12 LKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQ 71
L RI F +L IL + C + + +++ VFV + + ++ G I A++
Sbjct: 136 LNRITFSTML-ILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKR 194
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA 131
FD+M ++V+ N +ITG + G ++ES+ LF + ++ +SW MI G + N +A
Sbjct: 195 YFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREA 254
Query: 132 FDYFQAMPERNTA----TYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDG 183
D F+ M A T+ ++++ L E ++ + R NV +A++D
Sbjct: 255 LDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDM 314
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD---- 233
+ K + A + M KNV+SWT M+ GY +N EA ++F+ M PD
Sbjct: 315 YSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTL 374
Query: 234 ---------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
+ V A+IT + K G EN+ LF +
Sbjct: 375 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNI 434
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+D VS+ A++AGYAQ G A E + LF M+ ++PD T + V +ACS L+ +G Q
Sbjct: 435 RDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQY 494
Query: 327 HVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHG 384
+I+ +G V C +I + R G + ++ + P++V W T++++ HG
Sbjct: 495 FESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554
Query: 385 HYE 387
E
Sbjct: 555 DME 557
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
S+ C Q + ++ H L+++ + + N +IT Y + G + + F I P
Sbjct: 10 SLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQP 69
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
NL SWNTI++ +++ G + F+ M DG+++ +S + G ++++ ++
Sbjct: 70 NLFSWNTILSVYSKLGLLSQMQQIFNLMPFR----DGVSWNLAISGYANYGSCSDAVRVY 125
Query: 429 ELMVK 433
+LM+K
Sbjct: 126 KLMLK 130
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 191/497 (38%), Positives = 287/497 (57%), Gaps = 16/497 (3%)
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
++ LF MP ++ ++W MI G + ND ++ A + F+AM E A +NAMISG++ G
Sbjct: 211 ARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCF 270
Query: 160 EEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYM---------SFKNVV 206
+EA L +M + I+YT ++ G + + Y+ SF V
Sbjct: 271 QEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSV 330
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
S +IT Y KN + EAR++FY MP +N+ A+++G+ G +E A+ FE +
Sbjct: 331 S-NALITLYCKNNKVDEARKIFYAMPV--RNIITWNAILSGYVNAGRMEEAKSFFEEMPV 387
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K+ ++ MI+G AQNG +E L+LF M +P D TACS L L GRQ
Sbjct: 388 KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQL 447
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H ++ G+E+++SV NA+I+MY++CG + +E F + S +LVSWN++IAA QHGH
Sbjct: 448 HAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHG 507
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
KA+ F QM G PD ITFL++L+AC HAG V + F M++ YGI P +HY
Sbjct: 508 VKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYAR 567
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VD+ RAG A + MP + VW +LLA C I+ N++LG AA+++ +L PQN
Sbjct: 568 MVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQN 627
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
YV+LSN+YA G W +V +VR LM++Q V K+ A SWIE+ NKVH F+ D HP +
Sbjct: 628 DGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEV 687
Query: 567 DKIHLELKRASVQMKSV 583
++ L++ ++MK +
Sbjct: 688 LSVYRYLEQLGLEMKKL 704
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 220/485 (45%), Gaps = 103/485 (21%)
Query: 37 SSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
SS+ L L S V+V A +S + +SA R+LFD+M +D +TW +ITGY +N
Sbjct: 183 SSSVLNALLS---VYVKRASELGISCSAMVSA-RKLFDEMPKRDELTWTTMITGYVRNDD 238
Query: 97 LQESKNLFQSMPVKNI-VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATY----- 146
L ++ +F++M V+N+ +WN MI+G + +A + M + + TY
Sbjct: 239 LNGAREVFEAM-VENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIIS 297
Query: 147 ----------------------------------NAMISGFLKHGRLEEATRLFEQMPRR 172
NA+I+ + K+ +++EA ++F MP R
Sbjct: 298 ACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR 357
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
N+I++ A+L G++ G +++A++ + M KN+++ TVMI+G +N E +LF +M
Sbjct: 358 NIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR 417
Query: 233 -------------------------------------DYDKNVFVVTAMITGFCKVGMLE 255
Y+ ++ V AMI+ + K G++E
Sbjct: 418 LDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVE 477
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A +F + D VS+N+MIA Q+G +A+ LF M+K + PD T ++V TACS
Sbjct: 478 AAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACS 537
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCN----AVITMYSRCGGILDSELAFRQIHS-PNL 370
L+ +GR ++ + ++ C ++ ++ R G + + + S P
Sbjct: 538 HAGLVEKGRHYFNSMLES---YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGA 594
Query: 371 VSWNTIIAAFAQHGHY----EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
W ++A HG+ E A F M N DG T++ L + G+ NE
Sbjct: 595 PVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQN----DG-TYVLLSNIYADVGRWNEVAK 649
Query: 427 LFELM 431
+ +LM
Sbjct: 650 VRKLM 654
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 200/483 (41%), Gaps = 88/483 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + ++ + ARQLF+++ D I +IT Y G L+ + +F P+
Sbjct: 52 NRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLY--- 108
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
R++ YNAMI+G+ +G A LF M R +
Sbjct: 109 --------------------------MRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD 142
Query: 174 V----ISYTAMLDGFM-------KKGEVDKARALSDYMSFKNVVSWTVMITGYVKN---- 218
++T++L + + G++ A + M + +++ YVK
Sbjct: 143 FRPDDFTFTSVLSALVLFVGNEQQCGQMHCA-VVKTGMGCVSSSVLNALLSVYVKRASEL 201
Query: 219 ----ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
AR+LF MP D+ T MITG+ + L AR +FE + ++NA
Sbjct: 202 GISCSAMVSARKLFDEMPKRDE--LTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNA 259
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI+GY G +EAL L M + +Q DD T ++ +AC+ + G+Q H +++N
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNE 319
Query: 335 FEANVSVC----NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI-------------- 376
N S C NA+IT+Y + + ++ F + N+++WN I
Sbjct: 320 LNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAK 379
Query: 377 -----------------IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
I+ AQ+G ++ L F QM L+GF+P F L+AC G
Sbjct: 380 SFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLG 439
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ L +V + G S ++ + ++ G +E A + MP D W S+
Sbjct: 440 ALENGRQLHAQLVHL-GYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSM 497
Query: 480 LAA 482
+AA
Sbjct: 498 IAA 500
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 156/390 (40%), Gaps = 96/390 (24%)
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
+L+ + K + AR L + + + ++ T +IT Y RE+F P Y ++
Sbjct: 54 LLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSV 113
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
AMITG YA NG AL LF M + D
Sbjct: 114 FYNAMITG-------------------------------YAHNGDGHSALELFRAMRRDD 142
Query: 300 MQPDDATLVSVFTACSALQLLNEGR--QSHVLVIRNGFE-ANVSVCNAVITMYSR----- 351
+PDD T SV +A L + NE + Q H V++ G + SV NA++++Y +
Sbjct: 143 FRPDDFTFTSVLSAL-VLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASEL 201
Query: 352 ---CGGILDSELAFRQIHSPNLVSWNTIIAAFAQH------------------------- 383
C ++ + F ++ + ++W T+I + ++
Sbjct: 202 GISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMI 261
Query: 384 ------GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
G +++AL +M G D IT+ +++SAC + G F++ +V+
Sbjct: 262 SGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGS-------FQMGKQVHAY 314
Query: 438 IPSSE----HYTC------LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
I +E H C L+ + + ++++A +I MP + W ++L+ V
Sbjct: 315 ILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSGYV--- 370
Query: 488 NVELGELAAKKMRELDPQN-SAVYVMLSNL 516
N E A E+ +N + VM+S L
Sbjct: 371 NAGRMEEAKSFFEEMPVKNLLTLTVMISGL 400
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
R H +I +GF+ N ++ MY + ++ + F +I +P+ ++ T+I A+
Sbjct: 32 ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCA 91
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
G+ E F+ L + D + + ++++ H G + +++LF M +
Sbjct: 92 LGNLELGREIFNGTPL--YMRDSVFYNAMITGYAHNGDGHSALELFRAMRR 140
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 193/511 (37%), Positives = 306/511 (59%), Gaps = 17/511 (3%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L++L + V NA + ++ G I AR+LFD+M + WN II+GYW+ G +E+
Sbjct: 125 LLKLGHSHDHHVRNAIMGIYAKYGCIELARKLFDEMPDRTAADWNVIISGYWKCGNEKEA 184
Query: 101 KNLFQSM--PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
LF M KN+++W M+ G ++ A YF MPER A++NAM+SG+ + G
Sbjct: 185 TRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQSGA 244
Query: 159 LEEATRLFEQM----PRRNVISYTAMLDGFMKKGEVDKARALS---DYMSFK-NVVSWTV 210
+E RLF+ M + ++ +L G+ A ++ D M+F+ N T
Sbjct: 245 AQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNYFVKTA 304
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
++ + K A+++F ++ Y KN AMI+ + +VG L AR LF ++ ++ V
Sbjct: 305 LLDMHAKCGNLEVAQKIFEQLGVY-KNSVTWNAMISAYARVGDLSLARDLFNKMPERNTV 363
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
S+N+MIAGYAQNG + +A++LF MI D +PD+ T+VSVF+AC L L G + +
Sbjct: 364 SWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSI 423
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ N + ++S N++I MY RCG + D+ + F+++ + +LVS+NT+I+ A HGH ++
Sbjct: 424 LHENHIKLSISGYNSLIFMYLRCGSMEDARITFQEMATKDLVSYNTLISGLAAHGHGTES 483
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
+ S+M +G PD IT++ +L+AC HAG + E +FE + +P +HY C++D
Sbjct: 484 IKLMSKMKEDGIGPDRITYIGVLTACSHAGLLEEGWKVFESIK-----VPDVDHYACMID 538
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L R G+LE+A ++ Q MP E G++GSLL A I+ VELGELAA K+ +++P NS
Sbjct: 539 MLGRVGKLEEAVKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGN 598
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
YV+LSN+YA AG W+DV +VR M++QGV K
Sbjct: 599 YVLLSNIYALAGRWKDVDKVRDKMRKQGVKK 629
>gi|2245038|emb|CAB10457.1| hypothetical protein [Arabidopsis thaliana]
gi|7268435|emb|CAB80955.1| hypothetical protein [Arabidopsis thaliana]
Length = 851
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 188/497 (37%), Positives = 285/497 (57%), Gaps = 35/497 (7%)
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG-CIDNDRIDDAFDYFQAMP 139
+ N II ++G + + +F M KN ++WN ++ G D R+ +A F +P
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E +T +YN M+S ++++ E+A F++MP ++ S+ M+ G+ ++GE++KAR L
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M KN VSW MI+GY++ +A F P + V TAMITG+ K +E A
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPV--RGVVAWTAMITGYMKAKKVELAEA 238
Query: 260 LFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F+ + K+ V++NAMI+GY +N E+ L+LF M++ ++P+ + L S C+
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCTLTS 298
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L I+MY +CG + D+ F + ++V+WN +I+
Sbjct: 299 L--------------------------ISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 332
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+AQHG+ +KAL F +M N PD ITF+++L AC HAG VN M FE MV+ Y +
Sbjct: 333 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 392
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
P +HYTC+VD+L RAG+LE+A ++ + MPF V+G+LL AC ++ NVEL E AA+K
Sbjct: 393 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 452
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV-----TKQCAYSWIEIGNKV 553
+ +L+ QN+A YV L+N+YA+ W DV RVR MKE V K YSWIEI NKV
Sbjct: 453 LLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVERVKVPGYSWIEIRNKV 512
Query: 554 HYFLGGDMSHPCIDKIH 570
H+F D HP +D IH
Sbjct: 513 HHFRSSDRIHPELDSIH 529
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 321/603 (53%), Gaps = 78/603 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++ N ++A +AG+ + AR++FD M ++ T+NA+++ L + + LF SM
Sbjct: 41 TYLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQ 100
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM--------PERNTATYNAMISGFL------- 154
++IVS+N +IAG A + A+ P R T + M + L
Sbjct: 101 RDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGK 160
Query: 155 --------------------------KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
K + +A R F+++ +NV+ Y M+ G ++
Sbjct: 161 QFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCK 220
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----------------- 231
V++AR L + M+ ++ ++WT M+TG+ +N EA E+F RM
Sbjct: 221 MVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILT 280
Query: 232 --------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
YD NVFV +A++ + K ++ A +F R+ K+ +S
Sbjct: 281 ACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIIS 340
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ A+I GY QNG +EEA+R+FS M + + PDD TL SV ++C+ L L EG Q H L +
Sbjct: 341 WTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLAL 400
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+G ++V NA++T+Y +CG I D+ F ++ + VSW +++ +AQ G ++ +
Sbjct: 401 VSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETID 460
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F +M G PDG+TF+ +LSAC AG V + F M K +GI+P +HYTC++D+
Sbjct: 461 LFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLY 520
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
SR+G+L++A + + MP D WG+LL+AC + ++E+G+ AA+ + E+DPQN A YV
Sbjct: 521 SRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYV 580
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHL 571
+L +++AA G W +V ++R M+++ V K+ SWI+ NKVH F D SHPC I+
Sbjct: 581 LLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYE 640
Query: 572 ELK 574
+L+
Sbjct: 641 KLE 643
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 185/394 (46%), Gaps = 47/394 (11%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++RL FV + + ++ + A++ FD++ +K+V+ +N +ITG + ++E+
Sbjct: 166 ILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEA 225
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKH 156
+ LF+ M ++ ++W M+ G N +A + F+ M + A T+ ++++
Sbjct: 226 RRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGAL 285
Query: 157 GRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
LE+ ++ + R NV +A++D + K + A + M+ KN++SWT +I
Sbjct: 286 SALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALI 345
Query: 213 TGYVKNERFCEARELFYRMP-------DYD------------------------------ 235
GY +N EA +F M DY
Sbjct: 346 VGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLM 405
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ V A++T + K G +E+A LF+ + D VS+ A+++GYAQ G A+E + LF M
Sbjct: 406 HYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKM 465
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ ++PD T + V +ACS + +GR H + +G +I +YSR G
Sbjct: 466 LAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGK 525
Query: 355 ILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYE 387
+ ++E +Q+ P+ + W T+++A G E
Sbjct: 526 LKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDME 559
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 212/632 (33%), Positives = 337/632 (53%), Gaps = 87/632 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
F+ N +SA +R G + AR++FD M ++ ++NA+++ + G ++ LF ++P
Sbjct: 50 TFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPD 109
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM--------------------PERNTATY--- 146
+ S+N ++A + R DA + AM E+ + T
Sbjct: 110 PDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQV 169
Query: 147 ----------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
A++ + K R EEA ++F+ MP RN++S+ +++ + + G V
Sbjct: 170 HALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPV 229
Query: 191 DKARAL----------SDYMSFKNVVSWTVMI----------TGYVKNERF--------- 221
D+A AL D ++ +V+S + T VK++RF
Sbjct: 230 DEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNA 289
Query: 222 -------C----EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
C EA+ +F RM ++V T+MITG+ K + +A+ +F ++ K+ V
Sbjct: 290 LVDMYAKCGRTWEAKCVFDRMAI--RSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVV 347
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++N +IA YA N EEALRLF + + + P T +V AC+ L L G+Q+HV V
Sbjct: 348 AWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHV 407
Query: 331 IRNGF------EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
++ GF E++V V N+++ MY + G I D F ++ + + VSWN +I +AQ+G
Sbjct: 408 LKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNG 467
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
+ AL+ F +M + PD +T + +LSACGH+G V E F+ M + +GIIP+ +HY
Sbjct: 468 RAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHY 527
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
TC++D+L RAG L++ ++ + MP E D +W SLL AC ++ N+++GE AA K+ ELDP
Sbjct: 528 TCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDP 587
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
NS YV+LSN+YA G W DV RVR MK +GV+KQ SWIEIG KV+ FL D HP
Sbjct: 588 DNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHP 647
Query: 565 CIDKIHLELKRASVQMKSVDDFVEIATSWSSF 596
C ++IH L+ +QM + EIA +F
Sbjct: 648 CRNEIHDTLRIIQMQMSRMSIDAEIADDLMNF 679
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 335 FEANVSVCNAVITMYSRCG------------------------------GILDSELA-FR 363
F + N +++ Y+R G G D LA F
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG--HAGKV 421
I P+ S+N ++AA AQHG AL F + M + F + +F S LSAC A +
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165
Query: 422 NESMDLFELMVKVYGIIPSSEH------YTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
E +V+ ++ S H T LVD+ ++ + E+A ++ MP E +
Sbjct: 166 GE---------QVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMP-ERNIVS 215
Query: 476 WGSLL 480
W SL+
Sbjct: 216 WNSLI 220
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/556 (33%), Positives = 309/556 (55%), Gaps = 48/556 (8%)
Query: 43 RLFSTQYVFVNNAKISALSR---AGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
+L + + V+NA I+ + G AR++ D+M KD +TW I+ G+ + G +
Sbjct: 189 KLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHA 248
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMIS---- 151
+++ F+ + + V WN MI+G + + +AF+ F+ M + T+ +++S
Sbjct: 249 ARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACAN 308
Query: 152 -GFLKHGRLEEATRLFEQ---MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
GF HG+ + Q +P + A++ + K G++ A + D M+ K+VVS
Sbjct: 309 AGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVS 368
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
W +++GY+++ G L+NA +F+ + K
Sbjct: 369 WNTILSGYIES---------------------------------GCLDNAARIFKEMPYK 395
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+S+ M++GY G+AE+AL+LF+ M D++P D T AC L L G+Q H
Sbjct: 396 SELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLH 455
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+++ GFEA+ S NA++TMY+RCG + D+ L F + + + VSWN +I+A QHGH
Sbjct: 456 AHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGR 515
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+AL F QM G PD I+FL++L+AC HAG V++ FE M + +GI P +HY L
Sbjct: 516 EALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARL 575
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
+D+L RAG++ +A + + MPFE +W ++L+ C IN ++ELG AA ++ ++ P++
Sbjct: 576 IDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHD 635
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
Y++LSN Y+AAG W D RVR LM+++GV K+ SWIE+GNKVH FL GD HP
Sbjct: 636 GTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAH 695
Query: 568 KIHLELKRASVQMKSV 583
+++ L+ +M+ +
Sbjct: 696 EVYRFLEMVGAKMRKL 711
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 193/432 (44%), Gaps = 58/432 (13%)
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLE 160
LF++ P V+ +++ R+ D+ +F ++P R+T +NAMIS F +
Sbjct: 82 LFRADP--GPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAA 139
Query: 161 EATRLFEQM------PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV---- 210
A +F + R + S+T++L + ++ + + + + + V
Sbjct: 140 PAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVS 199
Query: 211 --MITGYVKNERFC---EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+I Y+K + +AR++ MP+ D+ + T ++ G + G + AR FE I
Sbjct: 200 NALIALYMKCDAPGVTRDARKVLDEMPEKDELTW--TTIVVGHVRKGDVHAARSAFEEID 257
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+ V +NAMI+GY Q+G+ EA LF M+ + PD+ T S+ +AC+ G+
Sbjct: 258 GEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKS 317
Query: 326 SHVLVIR--NGF--EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
H IR F EA + V NA++T+YS+ G I + F + ++VSWNTI++ +
Sbjct: 318 VHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYI 377
Query: 382 QHG----------------------------H---YEKALIFFSQMGLNGFDPDGITFLS 410
+ G H E AL F+QM P T+
Sbjct: 378 ESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAG 437
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
++ACG G + L +V+ G S+ L+ + +R G ++ A + MP
Sbjct: 438 AVAACGELGALKHGKQLHAHLVQC-GFEASNSAGNALLTMYARCGAVKDARLVFLVMP-N 495
Query: 471 ADTGVWGSLLAA 482
D+ W ++++A
Sbjct: 496 VDSVSWNAMISA 507
>gi|15220741|ref|NP_176416.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
gi|75097094|sp|O04590.1|PPR88_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62260, mitochondrial; Flags: Precursor
gi|2160154|gb|AAB60776.1| F19K23.18 gene product [Arabidopsis thaliana]
gi|332195821|gb|AEE33942.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
Length = 656
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 301/551 (54%), Gaps = 59/551 (10%)
Query: 54 NAKISALSRAGKI---SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
N IS G I AR+LFD+M ++D +WN +I+GY +N + E+ LF+ MP +
Sbjct: 106 NTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER 165
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA-------------------------- 144
N VSW+ MI G N +D A F+ MP ++++
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYG 225
Query: 145 -----------TYNAMISGFLKHGRLEEATRLFEQMPR---------------RNVISYT 178
YN +I G+ + G++E A LF+Q+P +NV+S+
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV 238
+M+ ++K G+V AR L D M ++ +SW MI GYV R +A LF MP+ D +
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHS 345
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
+ M++G+ VG +E AR FE+ K VS+N++IA Y +N +EA+ LF M
Sbjct: 346 W--NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIE 403
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+PD TL S+ +A + L L G Q H +V++ +V V NA+ITMYSRCG I++S
Sbjct: 404 GEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMES 462
Query: 359 ELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
F ++ +++WN +I +A HG+ +AL F M NG P ITF+S+L+AC H
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 522
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
AG V+E+ F M+ VY I P EHY+ LV++ S GQ E+A I MPFE D VWG
Sbjct: 523 AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWG 582
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+LL AC I NV L +AA+ M L+P++S YV+L N+YA G+W + ++VR+ M+ +
Sbjct: 583 ALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKR 642
Query: 538 VTKQCAYSWIE 548
+ K+ SW++
Sbjct: 643 IKKERGSSWVD 653
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 205/443 (46%), Gaps = 64/443 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTT---------------KDVITWNAIITGYWQN 94
V+ N I + G++ AAR LFDQ+ K+V++WN++I Y +
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL 154
G + ++ LF M ++ +SWN MI G + R++DAF F MP R+ ++N M+SG+
Sbjct: 295 GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYA 354
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK-------NVVS 207
G +E A FE+ P ++ +S+ +++ + K + +A L M+ + + S
Sbjct: 355 SVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 208 WTVMITGYVKNERFCEARELFYR--MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
TG V + ++ + +PD V V A+IT + + G + +R +F+ ++
Sbjct: 415 LLSASTGLVNLRLGMQMHQIVVKTVIPD----VPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 266 PK-DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
K + +++NAMI GYA +G A EAL LF M + P T VSV AC+ L++E +
Sbjct: 471 LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
V S ++ +I P + +++++ + G
Sbjct: 531 AQFV-----------------------------SMMSVYKIE-PQMEHYSSLVNVTSGQG 560
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
+E+A+ + M F+PD + +LL AC V + E M ++ SS Y
Sbjct: 561 QFEEAMYIITSM---PFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEP--ESSTPY 615
Query: 445 TCLVDILSRAGQLEKAWQITQGM 467
L ++ + G ++A Q+ M
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNM 638
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 189/547 (34%), Positives = 319/547 (58%), Gaps = 21/547 (3%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---- 107
V N+ ++ + ++ +AR++FD+MT +DVI+WN+II GY NG ++ ++F M
Sbjct: 232 VGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSG 291
Query: 108 ---PVKNIVSWNCMIAGCIDNDRID--DAFDYF--QAMPERNTATYNAMISGFLKHGRLE 160
+ IVS + AGC D+ I A F +A R N ++ + K G L+
Sbjct: 292 IEIDLATIVS---VFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYV 216
A +F +M R+V+SYT+M+ G+ ++G +A L + M + +V + T ++
Sbjct: 349 SAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 217 KNERFCEARELFYRMPDYDK--NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+N E + + + + D ++FV A++ + K G + A L+F ++ KD +S+N
Sbjct: 409 RNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNT 468
Query: 275 MIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+I GY++N A EAL LF+ + ++ PD+ T+ V AC++L ++GR+ H ++RN
Sbjct: 469 VIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G+ ++ V N+++ MY++CG +L + L F I S +LVSW +IA + HG ++A+ F
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+QM G +PD I+F+SLL AC H+G V+E F +M I P+ EHY C+VD+L+R
Sbjct: 589 NQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
G L KA++ + MP D +WG+LL C I+ +V+L E A+K+ EL+P+N+ YV++
Sbjct: 649 TGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLM 708
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
+N+YA A W +V R+R + ++G+ K SWIEI +V+ F+ GD S+P +KI L
Sbjct: 709 ANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFL 768
Query: 574 KRASVQM 580
+ +M
Sbjct: 769 RGVRARM 775
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 11/237 (4%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D N+ A++ C G L+ A +F++++ + + +N ++ A++G ++ LF
Sbjct: 128 DSNLGSKLALMYTNC--GDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKK 185
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M+ ++ D T V + S+L+ +N G Q H ++++GF SV N+++ Y +
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHR 245
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F ++ +++SWN+II + +G EK L F QM +G + D T +S+ +
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAG 305
Query: 415 CGHAGKVNESMDLFELMVKVYGIIP--SSEHYTC--LVDILSRAGQLEKAWQITQGM 467
C + ++ V +G+ S E C L+D+ S+ G L+ A + + M
Sbjct: 306 CADSRLIS-----LGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREM 357
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 51/246 (20%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV+NA + ++ G + A +F +M KD+I+WN +I GY +N + E+ +LF + V
Sbjct: 432 IFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLV 491
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ S + C+ +P A+ +A G HG + +
Sbjct: 492 EKRFSPDERTVACV--------------LPA--CASLSAFDKGREIHGYIMRNGYFSD-- 533
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
R+V + +++D + K G + AR L D ++ K++VSWTVMI GY + EA LF
Sbjct: 534 --RHVAN--SLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+M I+P D +SF +++ + +G+ +E
Sbjct: 590 QMRQAG----------------------------IEP-DEISFVSLLYACSHSGLVDEGW 620
Query: 290 RLFSGM 295
R F+ M
Sbjct: 621 RFFNIM 626
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 4/220 (1%)
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N + + ++G + A++L K D+ P TL SV C+ + L +G++ +
Sbjct: 65 NTQLRRFCESGNLKNAVKLLHVSGKWDIDP--RTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
NGF + ++ + + MY+ CG + ++ F Q+ + WN ++ A+ G + ++
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M +G + D TF + + VN L ++K G + LV
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILK-SGFGERNSVGNSLVAFYL 241
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
+ +++ A ++ M E D W S++ V N E G
Sbjct: 242 KNHRVDSARKVFDEMT-ERDVISWNSIINGYVSNGLAEKG 280
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/639 (31%), Positives = 325/639 (50%), Gaps = 121/639 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
FV NA ++ SR G + AA Q+F +M +D I++N++I+G Q GF + LF+ M
Sbjct: 248 TFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQL 307
Query: 109 ---------------------------------VKNIVSWNCMIAG--------CIDNDR 127
+K +S + +I G C D
Sbjct: 308 DCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD--- 364
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRR--------- 172
I+ A +YF N +N M+ + + G L E+ +F QM P +
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRT 424
Query: 173 ------------------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
NV + ++D + K GE+D AR + + ++VVSW
Sbjct: 425 CTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSW 484
Query: 209 TVMITGYVKNERFCEARELFYRMPD----------------------------------- 233
T MI GY +++ F EA +LF M +
Sbjct: 485 TAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYI 544
Query: 234 --YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
Y +++ + A+++ + + G ++A L FE+I KD +S+NA+I+G+AQ+G EEAL++
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQV 604
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
FS M + ++ + T S +A + + +G+Q H ++I+ G+++ N +IT+YS+
Sbjct: 605 FSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSK 664
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG I D++ F ++ N+VSWN +I ++QHG+ +A+ F +M G P+ +TF+ +
Sbjct: 665 CGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGV 724
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
LSAC H G VNE + F M K +G++P EHY C+VD+L RA L A + + MP E
Sbjct: 725 LSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEP 784
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
D +W +LL+AC ++ N+E+GE AA+ + EL+P++SA YV+LSN+YA +G W R R
Sbjct: 785 DAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQ 844
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
+MK++GV K+ SWIE+ N +H F GD HP ++I+
Sbjct: 845 MMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIY 883
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 173/338 (51%), Gaps = 17/338 (5%)
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
N+ ++ + GC ++ + DA F++ + + +I +L HG ++ A +LF
Sbjct: 9 NVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLF 68
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ +P NV + ++ G + K + L M +NV T + + R C +
Sbjct: 69 DDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENV---TPDESTFASVLRACSGGK 125
Query: 227 LFYRMPD----------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
+++ + + + V +I + K G ++ A+L+FER+ KD VS+ AMI
Sbjct: 126 APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMI 185
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+G +QNG +EA+ LF M K + P SV +AC+ ++L G Q H +++ G
Sbjct: 186 SGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLS 245
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ VCNA++T+YSR G ++ +E F ++H + +S+N++I+ AQ G ++AL F +M
Sbjct: 246 SETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM 305
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
L+ PD +T SLLSAC G + L ++K+
Sbjct: 306 QLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKM 343
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 127/538 (23%), Positives = 243/538 (45%), Gaps = 50/538 (9%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
V N I S+ G + A+ +F+++ KD ++W A+I+G QNG E+ LF M
Sbjct: 148 LVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKS 207
Query: 111 NIVS----WNCMIAGC--IDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEA 162
++ ++ +++ C I+ ++ + F ++ T+ NA+++ + + G L A
Sbjct: 208 AVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAA 267
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
++F +M RR+ ISY +++ G ++G D+A L + M + V + +
Sbjct: 268 EQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASV 327
Query: 223 EARELFYRMPDY------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
A ++ Y ++ + +++ + K +E A F + ++ V +N M+
Sbjct: 328 GAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVML 387
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
Y Q G E+ +F M + P+ T S+ C++L L+ G Q H VI++GF+
Sbjct: 388 VAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQ 447
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
NV VC+ +I MY++ G + + +++ ++VSW +IA + QH + +AL F +M
Sbjct: 448 FNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEM 507
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVN---------------ESMDLFELMVKVYGIIPSS 441
G D I F S +SAC +N E + + +V +Y +
Sbjct: 508 ENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRA 567
Query: 442 E---------------HYTCLVDILSRAGQLEKAWQITQGM---PFEADTGVWGSLLAAC 483
+ + L+ +++G E+A Q+ M EA+ +GS ++A
Sbjct: 568 QDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSAT 627
Query: 484 VINLNVELGELAAKKMRE--LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
N++ G+ M + D + A V+++ LY+ G D R M E+ V
Sbjct: 628 ANTANIKQGKQIHAMMIKTGYDSETEASNVLIT-LYSKCGSIEDAKREFFEMPEKNVV 684
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 197/442 (44%), Gaps = 48/442 (10%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY 146
+I Y +G + + LF +P N+ WN +I+G + F M N
Sbjct: 51 LIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPD 110
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISY---------TAMLDGFMKKGEVDKARALS 197
+ + L+ +A + +I + ++D + K G VD A+ +
Sbjct: 111 ESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVF 170
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD------------------------ 233
+ + K+ VSW MI+G +N R EA LF +M
Sbjct: 171 ERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFK 230
Query: 234 -------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
FV A++T + + G L A +F ++ +D +S+N++I+G A
Sbjct: 231 LGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLA 290
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
Q G ++ AL+LF M M+PD T+ S+ +AC+++ +G+Q H VI+ G +++
Sbjct: 291 QRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLI 350
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
+ +++ +Y +C I + F + N+V WN ++ A+ Q G+ ++ F QM + G
Sbjct: 351 IEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEG 410
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
P+ T+ S+L C G ++ + ++K G + + L+D+ ++ G+L+ A
Sbjct: 411 LMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS-GFQFNVYVCSVLIDMYAKHGELDTA 469
Query: 461 WQITQGMPFEADTGVWGSLLAA 482
I Q + E D W +++A
Sbjct: 470 RGILQRLR-EEDVVSWTAMIAG 490
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/617 (31%), Positives = 333/617 (53%), Gaps = 77/617 (12%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT----------------------- 77
+I+ F +F+ N +SA ++ +I+ AR++FDQM
Sbjct: 35 IIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEM 94
Query: 78 --------TKDVITWNAIITGYWQNGFLQESKNLFQSM----PVK-NIVSWNCMI----- 119
T+D+++WN++I+ Y GFL +S + M P N ++ + M+
Sbjct: 95 ERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASK 154
Query: 120 AGCI------------------------------DNDRIDDAFDYFQAMPERNTATYNAM 149
GC+ + A F MPE+N YN +
Sbjct: 155 QGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTL 214
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV---- 205
I+G ++ R+E++ +LF M ++ IS+TAM+ GF + G +A L M +N+
Sbjct: 215 IAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQ 274
Query: 206 VSWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
++ ++T E +++ + DY N+FV +A++ +CK +++A +F +
Sbjct: 275 YTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRK 334
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ K+ VS+ AM+ GY QNG +EEA+++F M ++PDD TL SV ++C+ L L EG
Sbjct: 335 MNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEG 394
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
Q H + +G + ++V NA++T+Y +CG I DS F ++ + VSW +++ +AQ
Sbjct: 395 AQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQF 454
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G + L F M +GF PD +TF+ +LSAC AG V + +FE M+K + IIP +H
Sbjct: 455 GKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDH 514
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
YTC++D+ SRAG+LE+A + MPF D W SLL++C + N+E+G+ AA+ + +L+
Sbjct: 515 YTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLE 574
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P N+A Y++LS++YAA G W +V +R M+++G+ K+ SWI+ N+VH F D S+
Sbjct: 575 PHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSN 634
Query: 564 PCIDKIHLELKRASVQM 580
P D+I+ EL++ + +M
Sbjct: 635 PFSDQIYSELEKLNYKM 651
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 229/514 (44%), Gaps = 88/514 (17%)
Query: 1 MLCNSYFHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISAL 60
ML N F+ L RI +L IL++ C + +++ YVFV + +
Sbjct: 132 MLYNGPFN---LNRIALSTML-ILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMY 187
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA 120
S+ G + ARQ FD+M K+V+ +N +I G + +++S+ LF M K+ +SW MIA
Sbjct: 188 SKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIA 247
Query: 121 GCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRR---- 172
G N +A D F+ M E + T+ ++++ L+E ++ + R
Sbjct: 248 GFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQD 307
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM- 231
N+ +A++D + K + A + M+ KNVVSWT M+ GY +N EA ++F M
Sbjct: 308 NIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQ 367
Query: 232 -----PD-------------------------------YDKNVFVVTAMITGFCKVGMLE 255
PD + V A++T + K G +E
Sbjct: 368 NNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIE 427
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
++ LF + D VS+ A+++GYAQ G A E LRLF M+ +PD T + V +ACS
Sbjct: 428 DSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACS 487
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L+ +G Q I +S + +I P +
Sbjct: 488 RAGLVQKGNQ-----------------------------IFESMIKEHRI-IPIEDHYTC 517
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-V 434
+I F++ G E+A F ++M F PD I + SLLS+C + + +M++ + + +
Sbjct: 518 MIDLFSRAGRLEEARKFINKM---PFSPDAIGWASLLSSC----RFHRNMEIGKWAAESL 570
Query: 435 YGIIP-SSEHYTCLVDILSRAGQLEKAWQITQGM 467
+ P ++ Y L I + G+ E+ + +GM
Sbjct: 571 LKLEPHNTASYILLSSIYAAKGKWEEVANLRKGM 604
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 311/546 (56%), Gaps = 14/546 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV- 109
++ N +S ++ G ++ AR++FD + +++++W A+I + E+ +++M +
Sbjct: 132 YLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLA 191
Query: 110 ---KNIVSWNCMIAGCIDNDRIDDA----FDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
+ V++ ++ + + + + +A E +++ + K G + +A
Sbjct: 192 GCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKA 251
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS----FKNVVSWTVMITGYVKN 218
+F+++P +NV+++T ++ G+ ++G+VD A L + M N +++T ++ G
Sbjct: 252 QVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTP 311
Query: 219 ERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
+++ + Y + ++VV A+IT +CK G L+ AR LF + +D V++ AM+
Sbjct: 312 LALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMV 371
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
GYAQ G +EA+ LF M + ++PD T S T+CS+ L EG+ H ++ G+
Sbjct: 372 TGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYS 431
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+V + +A+++MY++CG + D+ L F Q+ N+V+W +I AQHG +AL +F QM
Sbjct: 432 LDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQM 491
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G PD +TF S+LSAC H G V E F M YGI P EHY+C VD+L RAG
Sbjct: 492 KKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGH 551
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
LE+A + MPF+ VWG+LL+AC I+ +VE GE AA+ + +LDP + YV LSN+
Sbjct: 552 LEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNI 611
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
YAAAG + D +VR +M+++ V K+ SWIE+ KVH F D SHP +I+ EL +
Sbjct: 612 YAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKL 671
Query: 577 SVQMKS 582
+ Q+K
Sbjct: 672 TEQIKE 677
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 25/274 (9%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T + +S K GRL+EA + M + Y+ + G ++ E + R+L
Sbjct: 60 DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQ--ECARLRSLEQ--- 114
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
V ++ +G ++ R+ E +++ + K G L +AR +F
Sbjct: 115 -GREVHAAILKSG-IQPNRYLE------------------NTLLSMYAKCGSLTDARRVF 154
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ I+ ++ VS+ AMI + EA + + M +PD T VS+ A + +LL
Sbjct: 155 DGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQ 214
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G++ H+ + + G E V +++ MY++CG I +++ F ++ N+V+W +IA +A
Sbjct: 215 VGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYA 274
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
Q G + AL +M P+ IT+ S+L C
Sbjct: 275 QQGQVDVALELLEKMQQAEVAPNKITYTSILQGC 308
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 115/242 (47%), Gaps = 14/242 (5%)
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D ++ + ++ + G +EAL + + MI + + C+ L+ L +GR+ H
Sbjct: 60 DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
++++G + N + N +++MY++CG + D+ F I N+VSW +I AF
Sbjct: 120 AAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNL 179
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY------GIIPSS 441
+A + M L G PD +TF+SLL+A + +L ++ KV+ G+
Sbjct: 180 EAYKCYETMKLAGCKPDKVTFVSLLNAFTNP-------ELLQVGQKVHMEIAKAGLELEP 232
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
T LV + ++ G + KA I +P E + W L+A V++ +KM++
Sbjct: 233 RVGTSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQ 291
Query: 502 LD 503
+
Sbjct: 292 AE 293
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 142/311 (45%), Gaps = 27/311 (8%)
Query: 14 RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY---VFVNNAKISALSRAGKISAAR 70
+I + IL+ +TP + H + + Y ++V NA I+ + G + AR
Sbjct: 298 KITYTSILQGCTTPLA----LEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEAR 353
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDND 126
+LF + +DV+TW A++TGY Q GF E+ +LF+ M + I +++ + C
Sbjct: 354 KLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPA 413
Query: 127 RIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
+ + Q + + +A++S + K G +++A +F QM RNV+++TAM+
Sbjct: 414 FLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMIT 473
Query: 183 GFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELFYRM-PDYDKN 237
G + G +A + M + + V++T +++ E R+ F M DY
Sbjct: 474 GCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIK 533
Query: 238 VFV--VTAMITGFCKVGMLENAR--LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
V + + + G LE A +L QP V + A+++ + E R
Sbjct: 534 PMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSV-WGALLSACRIHSDVERGERAAE 592
Query: 294 GMIKMDMQPDD 304
++K+D PDD
Sbjct: 593 NVLKLD--PDD 601
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/537 (35%), Positives = 303/537 (56%), Gaps = 38/537 (7%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
++ AR++FDQ+ + V + +I+GY ++ L ++ NLF MP++++VSWN MI+GC++
Sbjct: 50 RLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVE 109
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
ID A F MPER+ ++ AM++G + G +++A RLF QMP +++ ++ AM+ G+
Sbjct: 110 CGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAAWNAMVHGY 169
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------- 231
++ G+VD A L M KNV+SWT MI G +NER EA LF M
Sbjct: 170 LQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFT 229
Query: 232 ---------PDYDKNV---------------FVVTAMITGFCKVGMLENARLLFERIQPK 267
P + +V ++IT + E++R +F + +
Sbjct: 230 CVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHE 289
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ A+++GY+ N E+AL +FS MI+ + P+ +T S +CSAL L+ G++ H
Sbjct: 290 KVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIH 349
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ ++ G V N+++ MYS G + D+ F +I ++VSWN+II AQHG +
Sbjct: 350 GVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS-EHYTC 446
A + F QM +PD ITF LLSAC H G + + LF + I +HYTC
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTC 469
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VDIL R G+L++A ++ + M + + VW +LL+AC ++ +V+ GE AA + LD ++
Sbjct: 470 MVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
SA YV+LSN+YA+AG W V+++R+ MK++G+ K+ SW+ I K H F GD H
Sbjct: 530 SAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDRPH 586
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 198/397 (49%), Gaps = 35/397 (8%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY 146
+I + N L E++ +F +P ++ + MI+G ++R+ DA + F MP R+ ++
Sbjct: 41 LICNHLLNRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSW 100
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N+MISG ++ G ++ A ++F++MP R+V+S+TAM++G + G VD+A L M K++
Sbjct: 101 NSMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIA 160
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
+W M+ GY++ + +A +LF +MP
Sbjct: 161 AWNAMVHGYLQFGKVDDALKLFKQMP---------------------------------R 187
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K+ +S+ MI G QN + EAL LF M++ ++ T V TAC+ + G Q
Sbjct: 188 KNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQV 247
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H +I++GF V ++IT+Y+ C DS F ++ + W +++ ++ + +
Sbjct: 248 HGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKH 307
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
E AL FS+M N P+ TF S L++C G ++ ++ + VK+ G+ +
Sbjct: 308 EDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKL-GLGTVAFVGNS 366
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
LV + S +G + A + + F+ W S++ C
Sbjct: 367 LVVMYSDSGNVNDAVSVFIEI-FKKSIVSWNSIIVGC 402
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 146/305 (47%), Gaps = 31/305 (10%)
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
R+ S + F+N V+I ++ N R EARE+F ++P +V + T MI+G+ +
Sbjct: 27 RSYSVTVEFQNR---EVLICNHLLNRRLDEAREVFDQVP--SPHVSLYTKMISGYTRSNR 81
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL--VSVF 311
L +A LF+ + +D VS+N+MI+G + G + A+++F D P+ + + ++
Sbjct: 82 LVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMF------DEMPERSVVSWTAMV 135
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
C +++ Q+ L + + +++ NA++ Y + G + D+ F+Q+ N++
Sbjct: 136 NGCFRFGMVD---QAERLFCQMPVK-DIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVI 191
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SW T+I Q+ +AL F M TF +++AC +A F +
Sbjct: 192 SWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANA-------PAFHMG 244
Query: 432 VKVYGIIPSS----EHYTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
+V+G I S E Y L+ + + + E + ++ M E VW +LL+ +
Sbjct: 245 TQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHE-KVAVWTALLSGYSL 303
Query: 486 NLNVE 490
N E
Sbjct: 304 NRKHE 308
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/527 (35%), Positives = 313/527 (59%), Gaps = 13/527 (2%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
I+A ++ G++ A QL++++ + V T A++T Y Q G +Q+++ +F + N+V+WN
Sbjct: 434 IAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWN 493
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI- 175
+IAG N + +A D FQ MP +N+A++ AMI+GF+++ EA L ++ R +
Sbjct: 494 AIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVP 553
Query: 176 ---SYTAMLDGFMKKGEVDKARALSDYMSFK-----NVVSWTVMITGYVKNERFCEAREL 227
S+T+ L G+V+ R + ++ K N +I+ Y K + +
Sbjct: 554 SDSSFTSALSACANIGDVEIGRVIHS-LAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHV 612
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F + K+ ++I+G + ML++AR++FE++ +D VS+ A+I+ Y Q G E
Sbjct: 613 FRTI--RVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEV 670
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL LF M+ ++P+ T+ S+ +AC L + G Q H L+ + GF+ + V N++IT
Sbjct: 671 ALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLIT 730
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY +CG D F ++ +L++WN ++ AQ+G ++A+ F QM + G PD ++
Sbjct: 731 MYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMS 789
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
FL +L AC HAG V+E F M + YGI+P HYTC+VD+L RAG L +A + + M
Sbjct: 790 FLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENM 849
Query: 468 PFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVT 527
P + D+ +W +LL AC I+ NVELG+ A+++ ++ SA YV+LSNL+A+ GMW V
Sbjct: 850 PVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVA 909
Query: 528 RVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
+R LMK+QG+TK+ SWI++ NK+H F+ GD +H I++I+ LK
Sbjct: 910 EIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALK 956
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 259/505 (51%), Gaps = 47/505 (9%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
H S + ++F N +I L R G++ AR++F++M +DV++WN++I GY QNG
Sbjct: 157 HKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNG 216
Query: 96 FLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK 155
+ E++ LF + KNI +W ++ G RI++A + F++M ERN ++NAMISG+++
Sbjct: 217 KVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQ 276
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
+G L+ A +LF++MP +NV S+ +++ G+ + +AR L D M +N VSW VMI+GY
Sbjct: 277 NGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGY 336
Query: 216 VKNERFCEARELFYRM------PD-------------------------------YDKNV 238
V + EA ++F +M PD Y+ +V
Sbjct: 337 VHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDV 396
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
V +A++ + + G L+ A FE + ++ S+ MIA +AQ G ++A++L+ + +
Sbjct: 397 VVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQ 456
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ AT ++ TA + + + + R L+ NV NA+I Y++ G + ++
Sbjct: 457 TV----ATKTAMMTAYAQVGRIQKAR----LIFDEILNPNVVAWNAIIAGYTQNGMLKEA 508
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+ F+++ N SW +IA F Q+ +AL ++ +G P +F S LSAC +
Sbjct: 509 KDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANI 568
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V + L +K G +S L+ + ++ G +E + + + + DT W S
Sbjct: 569 GDVEIGRVIHSLAIKT-GCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK-DTVSWNS 626
Query: 479 LLAACVINLNVELGELAAKKMRELD 503
L++ N ++ + +KM + D
Sbjct: 627 LISGLSENYMLDDARVVFEKMPKRD 651
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 140/342 (40%), Gaps = 65/342 (19%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+V N IS ++ G + +F + KD ++WN++I+G +N L +++ +F+ MP +
Sbjct: 591 YVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKR 650
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
++VSW +I+ + + A D F M R ++ L A +L EQ
Sbjct: 651 DVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQF- 709
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK---NERFCEAREL 227
+ + + D F+ G +IT Y K + FC +
Sbjct: 710 --HALIFKLGFDTFLFVG--------------------NSLITMYFKCGYEDGFC----V 743
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F MP++D +++NA++ G AQNG+ +E
Sbjct: 744 FEEMPEHD---------------------------------LITWNAVLVGCAQNGLGKE 770
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVI 346
A+++F M + PD + + V ACS L++EG + + + G V ++
Sbjct: 771 AIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMV 830
Query: 347 TMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYE 387
+ R G + ++E + P+ V W ++ A H + E
Sbjct: 831 DLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVE 872
>gi|357114699|ref|XP_003559133.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 640
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 202/555 (36%), Positives = 295/555 (53%), Gaps = 50/555 (9%)
Query: 43 RLFS---TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
RLF T+ V + A RAG++S AR+LFD M + V++W A++ GY + G +E
Sbjct: 121 RLFDGMLTRGVVAWTCMVDAYCRAGRVSEARELFDAMPERSVVSWTAMMHGYARAGMPRE 180
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
++ +F MP +N+VSW M+ D DA F MP+RN+ ++NA+ISG + GR+
Sbjct: 181 AREMFDRMPERNVVSWTVMVKAYADGGYFQDAMGLFDRMPQRNSYSWNAVISGSFRAGRV 240
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
+EA RLFE+MP RNV+S+TAM+ G + G V AR D M K++ +W MIT Y N
Sbjct: 241 DEAVRLFERMPHRNVVSWTAMVTGLAQNGRVSMAREFFDVMPCKDITAWNAMITAYANNG 300
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
EAR LF MP KD VS+N +I GY
Sbjct: 301 EMNEARRLFDSMP---------------------------------AKDLVSWNTVIDGY 327
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
A+ + +EA LF M++ P+ TL+SV ++ E Q H L G +
Sbjct: 328 AKKELKDEASGLFLDMLRSAASPNSTTLISVLVISESMV---EVVQIHGLATTLGLLSET 384
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
S+ NA++TMYSR G + + LAF+++ + ++W ++I AFA HGH AL F+QM +
Sbjct: 385 SLGNALLTMYSRIGDLPSAWLAFKRLEEKDAITWTSMIQAFANHGHASYALQAFAQMLEH 444
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
G +P TF ++LSAC HAG V E +F + VYG+ + EHYTCL+DIL RAG + +
Sbjct: 445 GKNPSSTTFTAVLSACSHAGLVEEGKSVFRSIRHVYGLERTIEHYTCLIDILGRAGNMRE 504
Query: 460 AWQITQGMPFE-ADTGVWGSLLAACVINLNV----ELGELAAKKMRELDPQNSAVYVM-L 513
A + MP + D + +LL AC+++ V E+GE+ AK DP S Y M L
Sbjct: 505 AMDVVNAMPPDICDDAILRTLLGACMMHKEVDAAREVGEVLAKS----DPSGSGGYYMVL 560
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
+N+ A+ G+W ++ V MK V K S I + + H F D HP +I+ L
Sbjct: 561 ANVLASGGLWDEMADVWKAMKGSNVRKTPGVSQITVDARNHAFFSRDQIHPQCAEIYEML 620
Query: 574 KRASV-QMKSVDDFV 587
V +MK + + V
Sbjct: 621 DHTLVPEMKKIVETV 635
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 186/357 (52%), Gaps = 31/357 (8%)
Query: 135 FQAMPE--RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
++A PE R A M++G+ K GR+ A RLF+ M R V+++T M+D + + G V +
Sbjct: 90 YRAAPEAARGPALDAVMLAGYAKAGRVHRARRLFDGMLTRGVVAWTCMVDAYCRAGRVSE 149
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
AR L D M ++VVSWT M+ GY + EARE+F RMP ++NV T M+ + G
Sbjct: 150 ARELFDAMPERSVVSWTAMMHGYARAGMPREAREMFDRMP--ERNVVSWTVMVKAYADGG 207
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
++A LF+R+ ++ S+NA+I+G + G +EA+RLF M + V +T
Sbjct: 208 YFQDAMGLFDRMPQRNSYSWNAVISGSFRAGRVDEAVRLFERMPHRN--------VVSWT 259
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEA----NVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
A L GR V + R F+ +++ NA+IT Y+ G + ++ F + +
Sbjct: 260 AM-VTGLAQNGR---VSMAREFFDVMPCKDITAWNAMITAYANNGEMNEARRLFDSMPAK 315
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM-DL 427
+LVSWNT+I +A+ ++A F M + P+ T +S+L ++ESM ++
Sbjct: 316 DLVSWNTVIDGYAKKELKDEASGLFLDMLRSAASPNSTTLISVLV-------ISESMVEV 368
Query: 428 FEL--MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ + G++ + L+ + SR G L AW + + E D W S++ A
Sbjct: 369 VQIHGLATTLGLLSETSLGNALLTMYSRIGDLPSAWLAFKRLE-EKDAITWTSMIQA 424
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 303/541 (56%), Gaps = 10/541 (1%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
LF F++N + ++ GK+ A+ LFD+M +D +WNA+++ Y ++G +Q K
Sbjct: 51 HLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKA 110
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
F MP ++ VS+N IAG N ++ + F+ M I L
Sbjct: 111 TFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLD 170
Query: 163 TRLFEQMPRR--------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
R +Q+ NV + A+ D + K GE+++AR L D ++ KN+VSW +MI+G
Sbjct: 171 LRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISG 230
Query: 215 YVKNERFCEARELFY--RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
Y KN + + L + R+ + + ++ +I +C+ G ++ AR +F + KD V +
Sbjct: 231 YAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCW 290
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
AM+ GYA+NG E+AL LF+ M+ ++PD TL SV ++C+ L L+ G+ H I
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSIL 350
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
G N+ V +A+I MYS+CG I D+ F + + N+VSWN +I AQ+GH + AL
Sbjct: 351 AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALEL 410
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F M F PD +TF+ +LSAC H + + + F+ + +G+ P+ +HY C+V++L
Sbjct: 411 FENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLG 470
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
R G++E+A + + M + D +W +LL+ C ++ E+AA+ + ELDP + Y+M
Sbjct: 471 RTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIM 530
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
LSN+YA+ G W+DV VR LMK + V K +SWIEI N+VH F D +HP + I+ +
Sbjct: 531 LSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEK 590
Query: 573 L 573
L
Sbjct: 591 L 591
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 194/532 (36%), Positives = 316/532 (59%), Gaps = 23/532 (4%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+NA I+ + G+++ A ++F+ M +DV++W+A++ G ++G + +++LF MP +N+
Sbjct: 171 SNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRMPDRNV 230
Query: 113 VSWNCMIAGCIDNDRIDDAFDYF-----QAMPERNTATYNAMISGFLKHGRLEEATRL-- 165
VSW+ MI G + + F F + + E N+ T M GR+ E ++
Sbjct: 231 VSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQIHG 290
Query: 166 --------FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
F+ + +VI+ +ML G D A + +S K++V+W +I+GY+
Sbjct: 291 LVSRLGFEFDNVLSNSVITMYSML------GCTDMADKVFCTVSDKDIVTWNSLISGYIH 344
Query: 218 NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
N A +F RMP K+V TAMI GF K G +ENA LF + KD + A+I+
Sbjct: 345 NNEVEAAYRVFGRMPV--KDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAIIS 402
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
G+ N EEAL ++ MI +P+ T+ SV A +AL LNEG Q H +++ E
Sbjct: 403 GFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNLEY 462
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
N+S+ N++I+ YS+ G ++D+ F + PN++S+N+II+ FAQ+G ++AL + +M
Sbjct: 463 NLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDEALGIYKKMQ 522
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
G +P+ +TFL++LSAC HAG V+E ++F M YGI P ++HY C+VDIL RAG L
Sbjct: 523 SEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDILGRAGLL 582
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
++A + + MPF+ +GVWG++L A +L ++L +LAA+++ +L+P+N+ YV+LSN+Y
Sbjct: 583 DEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQRITDLEPKNATPYVVLSNMY 642
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
+AAG D V++ +G+ K SWI + NKVH FL GD SH I++I
Sbjct: 643 SAAGKKIDGDLVKMAKNLKGIKKSPGCSWITMKNKVHLFLAGDQSHGSIEEI 694
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 201/388 (51%), Gaps = 39/388 (10%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
++++ N +I+ R G + A +F +M K+ +W A++T + QNG +Q ++ LF
Sbjct: 38 SKFLIQCNTQIAENGRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDE 97
Query: 107 MPVKNIVSWNCMIAGCIDND-RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
MP + VS N MI+ I N + A++ F + ERN +Y AMI GF+K G+ A +L
Sbjct: 98 MPQRTTVSNNAMISAYIRNGCNVGKAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKL 157
Query: 166 FEQMPR--RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+ + P R+ A+++G++K GEV++A + + M ++VVSW+ M+ G ++ R
Sbjct: 158 YRETPYEFRDPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAA 217
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
AR+LF RMP D+NV +AMI G+ G + LF ++ + V N+
Sbjct: 218 ARDLFDRMP--DRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNS--------- 266
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
T+ +F AC ++EG Q H LV R GFE + + N
Sbjct: 267 ---------------------TTMTIMFKACGNCGRMSEGMQIHGLVSRLGFEFDNVLSN 305
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
+VITMYS G ++ F + ++V+WN++I+ + + E A F +M +
Sbjct: 306 SVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNEVEAAYRVFGRMPV----K 361
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELM 431
D I++ ++++ +G+V +++LF ++
Sbjct: 362 DVISWTAMIAGFSKSGRVENAIELFNML 389
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 187/428 (43%), Gaps = 52/428 (12%)
Query: 29 SCGNFTPHSSNCLIRLFSTQYVF-----VNNAKISALSRAGKISAARQLFDQMTTKDVIT 83
+CGN S I ++ F ++N+ I+ S G A ++F ++ KD++T
Sbjct: 275 ACGNCGRMSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVT 334
Query: 84 WNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT 143
WN++I+GY N ++ + +F MPVK+++SW MIAG + R+++A + F +P ++
Sbjct: 335 WNSLISGYIHNNEVEAAYRVFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDD 394
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSD- 198
+ A+ISGF+ + EEA + +M + N ++ +++L +++ +
Sbjct: 395 FVWTAIISGFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTC 454
Query: 199 --YMSFK-NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
M+ + N+ +I+ Y K+ +A +F + + NV ++I+GF
Sbjct: 455 ILKMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDV--IEPNVISYNSIISGF------- 505
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
AQNG +EAL ++ M +P+ T ++V +AC+
Sbjct: 506 ------------------------AQNGFGDEALGIYKKMQSEGHEPNHVTFLAVLSACT 541
Query: 316 ALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDS--ELAFRQIHSPNLVS 372
L++EG + + G E ++ + R G+LD +L P+
Sbjct: 542 HAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDILGR-AGLLDEAIDLIRSMPFKPHSGV 600
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
W I+ A H + A + + + +P T +LS A DL ++
Sbjct: 601 WGAILGASKTHLRLDLAKL--AAQRITDLEPKNATPYVVLSNMYSAAGKKIDGDLVKMAK 658
Query: 433 KVYGIIPS 440
+ GI S
Sbjct: 659 NLKGIKKS 666
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 192/549 (34%), Positives = 330/549 (60%), Gaps = 22/549 (4%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V+N+ I+ + G + AR LFD+ K V+TWN++I+GY NG E+ +F SM +
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 112 I----VSWNCMIAGCID------NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ S+ +I C + +++ + + + ++N T A++ + K + +
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTAMLD 348
Query: 162 ATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGY- 215
A RLF+++ NV+S+TAM+ GF++ ++A L M K V +++V++T
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
V + A+ + +Y+++ V TA++ + K+G +E A +F I KD V+++AM
Sbjct: 409 VISPSEVHAQVV---KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL-LNEGRQSHVLVIRNG 334
+AGYAQ G E A+++F + K ++P++ T S+ C+A + +G+Q H I++
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
++++ V +A++TMY++ G I +E F++ +LVSWN++I+ +AQHG KAL F
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M DG+TF+ + +AC HAG V E F++MV+ I P+ EH +C+VD+ SRA
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
GQLEKA ++ + MP A + +W ++LAAC ++ ELG LAA+K+ + P++SA YV+LS
Sbjct: 646 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+YA +G W++ +VR LM E+ V K+ YSWIE+ NK + FL GD SHP D+I+++L+
Sbjct: 706 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLE 765
Query: 575 RASVQMKSV 583
S ++K +
Sbjct: 766 DLSTRLKDL 774
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 199/439 (45%), Gaps = 83/439 (18%)
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR--------- 171
G + + R+ +A + F P R+ +Y +++ GF + GR +EA RLF + R
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 172 ------------------------------RNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+V T+++D +MK R + D M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPD---------------------------- 233
+NVV+WT +I+GY +N E LF RM +
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
DK + V ++I + K G + AR+LF++ + K V++N+MI+GYA NG+
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EAL +F M ++ +++ SV C+ L+ L Q H V++ GF + ++ A
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 345 VITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
++ YS+C +LD+ F++I N+VSW +I+ F Q+ E+A+ FS+M G P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ T+ +L+A V ++ +VK SS T L+D + G++E+A ++
Sbjct: 396 NEFTYSVILTAL----PVISPSEVHAQVVKT-NYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 464 TQGMPFEADTGVWGSLLAA 482
G+ + D W ++LA
Sbjct: 451 FSGID-DKDIVAWSAMLAG 468
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 216/516 (41%), Gaps = 89/516 (17%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
+F +L++ +T C +C I+ V V + + + R++FD
Sbjct: 95 IFSSVLKVSATL--CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDY 134
+M ++V+TW +I+GY +N E LF M +
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGT---------------------- 190
Query: 135 FQAMPERNTATYNAMISGFLKHG----RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
+ N+ T+ A + + G L+ T + + + + ++++ ++K G V
Sbjct: 191 -----QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNV 245
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------------------ 232
KAR L D K+VV+W MI+GY N EA +FY M
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Query: 233 ---------------------DYDKNVFVVTAMITGFCK-VGMLENARLLFERIQPKDCV 270
+D+N + TA++ + K ML+ RL E + V
Sbjct: 306 ANLKELRFTEQLHCSVVKYGFLFDQN--IRTALMVAYSKCTAMLDALRLFKEIGCVGNVV 363
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+ AMI+G+ QN EEA+ LFS M + ++P++ T + TA + + H V
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHAQV 419
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ +E + +V A++ Y + G + ++ F I ++V+W+ ++A +AQ G E A+
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC---- 446
F ++ G P+ TF S+L+ C N SM + + I + C
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVC---AATNASMGQGK-QFHGFAIKSRLDSSLCVSSA 535
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+ + ++ G +E A ++ + E D W S+++
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISG 570
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 193/547 (35%), Positives = 303/547 (55%), Gaps = 54/547 (9%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
F++N I+ ++ GK AR++FD+M+ +++ +WN +++GY + G ++ ++ LF MP
Sbjct: 95 TFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPE 154
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK-------------- 155
K++VSWN M+ D+A ++ + +G L
Sbjct: 155 KDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQV 214
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
HG++ A L NV+ +++LD ++K G + AR L D MS ++V++WT M++GY
Sbjct: 215 HGQILVAGFL------SNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGY 268
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
K A ELF MP +KN TA+I+G
Sbjct: 269 AKWGDMKSANELFVEMP--EKNPVSWTALISG---------------------------- 298
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
YA+NG+ +AL LF+ M+ ++PD T S AC+++ L G+Q H ++R F
Sbjct: 299 ---YARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINF 355
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFAQHGHYEKALIFFS 394
+ N V +A+I MYS+CG + F + + ++V WNTII+A AQHG E+A+
Sbjct: 356 QPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLD 415
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
M +G PD ITF+ +L+AC H+G V + ++ FE M YGI+PS EHY CL+D+L RA
Sbjct: 416 DMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRA 475
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G E+ + MP++ D VW +LL C I+ ++ELG AA+++ EL+PQ+S YV+LS
Sbjct: 476 GCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLS 535
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
++YA G W V +VR LM E+ V K+ A SW+EI NKVH F D SHP ++I+ L+
Sbjct: 536 SIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVSDSSHPLKEQIYSVLE 595
Query: 575 RASVQMK 581
+ + QM+
Sbjct: 596 QLAGQME 602
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 179/391 (45%), Gaps = 48/391 (12%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNL- 103
S + ++ N +S ++ G I AR+LFD+M KDV++WN ++ + Q G+ E+
Sbjct: 121 MSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFY 180
Query: 104 --FQSMPVK-NIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKH 156
F+ + ++ N S+ ++ C+ + A N ++++ ++K
Sbjct: 181 SEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKC 240
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
G + +A +LF++M R+V+++T M+ G+ K G++ A L M KN VSWT +I+GY
Sbjct: 241 GLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYA 300
Query: 217 KNERFCEARELFYRM------PD-------------------------------YDKNVF 239
+N +A ELF +M PD + N
Sbjct: 301 RNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTI 360
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPK-DCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
VV+A+I + K G L R +F+ + K D V +N +I+ AQ+G EEA+++ M++
Sbjct: 361 VVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRS 420
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQ-SHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+PD T V + ACS L+ +G + G + +I + R G +
Sbjct: 421 GAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEE 480
Query: 358 SELAFRQI-HSPNLVSWNTIIAAFAQHGHYE 387
++ + P+ WN ++ HGH E
Sbjct: 481 VMDQLEKMPYKPDDRVWNALLGVCRIHGHIE 511
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 120/293 (40%), Gaps = 40/293 (13%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
S + V +S ++ G + +A +LF +M K+ ++W A+I+GY +NG ++ LF
Sbjct: 253 MSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELF 312
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
M + ++ + C+ A I+ LKHG+ A
Sbjct: 313 TKMMLFHVRPDQFTFSSCL---------------------CACASIAS-LKHGKQIHAY- 349
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMITGYVKNERFCE 223
L + N I +A++D + K G + R + D M K +VV W +I+ ++ E
Sbjct: 350 LLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEE 409
Query: 224 ARELFYRM----PDYDKNVFVVTAMITGFCKVGMLENARLLFER------IQPKDCVSFN 273
A ++ M DK FVV ++ G+++ FE I P +
Sbjct: 410 AIQMLDDMVRSGAKPDKITFVV--ILNACSHSGLVQQGLNFFESMSCDYGIVPSQ-EHYA 466
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+I + G EE + + KM +PDD ++ C + GR++
Sbjct: 467 CLIDLLGRAGCFEEVM---DQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKA 516
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQE 99
L+R+ V +A I S+ G + R++FD M K DV+ WN II+ Q+G +E
Sbjct: 350 LLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEE 409
Query: 100 SKNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNA 148
+ + M + +++ ++ C + + ++F++M P + Y
Sbjct: 410 AIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQE--HYAC 467
Query: 149 MISGFLKHGRLEEATRLFEQMP 170
+I + G EE E+MP
Sbjct: 468 LIDLLGRAGCFEEVMDQLEKMP 489
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/491 (36%), Positives = 279/491 (56%), Gaps = 5/491 (1%)
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAG---CIDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
L ++ F S +K ++NC++AG R+ DA F ++P + +YN ++S
Sbjct: 23 LAGAEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCH 82
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
G ++ A R+F MP R+V S+ M+ G K G +++A A+ M +N VSW M+
Sbjct: 83 FACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVA 142
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ A LF P+ + + TAM++G+ G ++ A F + ++ VS+N
Sbjct: 143 ARASSGDMGAAENLFRNAPE-KTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWN 201
Query: 274 AMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
A++AGY +N A +ALR+F M++ +QP+ +TL SV CS L L GRQ H ++
Sbjct: 202 AVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMK 261
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+++V ++++MY +CG + D+ F ++H+ ++V+WN +I+ +AQHG KA+
Sbjct: 262 LPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKL 321
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M G PD IT L++L+AC H G + + FE M + Y I P +HY+C+VD+L
Sbjct: 322 FEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLC 381
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG LE+A + MPFE +G+LL AC + N+E E AA+K+ E DPQN+ YV
Sbjct: 382 RAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQ 441
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
L+N+YA A W DV+RVR MK+ V K YSW+EI H F D HP +D IH +
Sbjct: 442 LANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDK 501
Query: 573 LKRASVQMKSV 583
L R MK++
Sbjct: 502 LDRLGKLMKAM 512
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 186/369 (50%), Gaps = 47/369 (12%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
A + S G+++ AR+LFD + D +++N +++ ++ G + + +F +MPV+++ S
Sbjct: 46 AGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTS 105
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR-N 173
WN M++G N I++A F+AMP RN ++NAM++ G + A LF P + +
Sbjct: 106 WNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAPEKTD 165
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
I +TAM+ G+M G V KA M +N+VSW ++ GYVKN R +A +F M +
Sbjct: 166 AILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVE 225
Query: 234 --------------------------------------YDKNVFVVTAMITGFCKVGMLE 255
+++ V T++++ +CK G L+
Sbjct: 226 DAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLD 285
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A LF+ + KD V++NAMI+GYAQ+G +A++LF M + PD TL++V TAC
Sbjct: 286 DACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACI 345
Query: 316 ALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS----PNL 370
L + G Q + E V + ++ + R G + E A IHS P+
Sbjct: 346 HTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLL---ERAVNMIHSMPFEPHP 402
Query: 371 VSWNTIIAA 379
++ T++ A
Sbjct: 403 SAYGTLLTA 411
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++L + + V + +S + G + A +LFD+M TKD++ WNA+I+GY Q+G +++
Sbjct: 260 MKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAI 319
Query: 102 NLFQSMPVKNIV-SWNCMIA---GCIDNDRIDDAFDYFQAMPER-----NTATYNAMISG 152
LF+ M + +V W ++A CI D F+ M E Y+ M+
Sbjct: 320 KLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDL 379
Query: 153 FLKHGRLEEATRLFEQMP 170
+ G LE A + MP
Sbjct: 380 LCRAGLLERAVNMIHSMP 397
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/633 (32%), Positives = 331/633 (52%), Gaps = 87/633 (13%)
Query: 34 TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQ 93
T C+I+ F+ N I + G + AR+LFD+M +++ +WN+II + +
Sbjct: 38 TSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTK 97
Query: 94 NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM--------------- 138
+GFL ++ ++F+ MP + SWN MI+G + R D+A YF M
Sbjct: 98 SGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSA 157
Query: 139 -------------PERNTATY-----------NAMISGFLKHGRLEEATRLFEQMPRRNV 174
+ ++ Y +A++ + K GR+E A +F++M R+
Sbjct: 158 LSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSR 217
Query: 175 ISYTAMLDGFMKKGEVDKARAL----------SDYMSFKNVVSWTVMITG---------- 214
+S+ +++ + + G VD+A + D ++ +VVS I+
Sbjct: 218 VSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHAR 277
Query: 215 --------------------YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
Y K R EAR +F MP ++V T+M++G+ K +
Sbjct: 278 VVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPI--RSVVSETSMVSGYAKASKV 335
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ AR +F + KD +++NA+IAG QNG EEAL LF + + + P T ++ AC
Sbjct: 336 KVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNAC 395
Query: 315 SALQLLNEGRQSHVLVIRNGF------EANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
+ L L GRQ+H V+++GF +++V V N++I MY +CG + + F+ +
Sbjct: 396 ANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEK 455
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
+ VSWN +I +AQ+G KAL F +M +G PD +T + +L AC HAG ++E F
Sbjct: 456 DCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYF 515
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
M +G++P +HYTC+VD+L RAG LE+A + + M + D VWGSLLAAC ++ N
Sbjct: 516 RSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRN 575
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
++LGE KK+ E+DP+NS YV+LSN+YA W++V RVR LM+++GV KQ SWIE
Sbjct: 576 IQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIE 635
Query: 549 IGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
I +++ F+ D H +I++ L+ QMK
Sbjct: 636 IQGELNVFMVKDKRHARKKEIYMVLRTILQQMK 668
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D + + C+ + + + H +I++ F + + N +I +Y +CG + + F
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 363 RQIHSPNLVSWNTIIAAFA-------------------------------QHGHYEKALI 391
++ N+ SWN+II AF QHG +++AL+
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY------T 445
+F+QM +GF + +F S LSAC + +L +++ ++ S + +
Sbjct: 138 YFAQMHGHGFLVNEYSFGSALSACA-------GLQDLKLGSQIHSLVYRSNYLSDVYMGS 190
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
LVD+ S+ G++E A + M + W SL+
Sbjct: 191 ALVDMYSKCGRVEYAQSVFDEMTVRSRVS-WNSLI 224
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/549 (33%), Positives = 306/549 (55%), Gaps = 46/549 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
++ A+++ Y + G ++++ +F + +N+VSW MIAG + R+++AF +F M
Sbjct: 340 EIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMI 399
Query: 140 ER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS----YTAMLDGFMKKGEVD 191
E N T+ +++ + L++ ++ +++ + I+ TA+L + K G +
Sbjct: 400 ESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLM 459
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY---------------------R 230
AR + + +S +NVV+W MIT YV++E++ A F +
Sbjct: 460 DARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCK 519
Query: 231 MPD----------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
PD ++ ++ + A+++ F G L +A LF + +D VS+N
Sbjct: 520 SPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNT 579
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+IAG+ Q+G + A F M + ++PD T + AC++ + L EGR+ H L+
Sbjct: 580 IIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAA 639
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ +V V +I+MY++CG I D+ L F + N+ SW ++I +AQHG ++AL F
Sbjct: 640 LDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFC 699
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
QM G PD ITF+ LSAC HAG + E + FE M K + I P EHY C+VD+ RA
Sbjct: 700 QMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRA 758
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G L +A + M + D+ +WG+LL AC ++L+VEL E A+K ELDP + VYV+LS
Sbjct: 759 GLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILS 818
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+YAAAGMW++VT++R +M ++GV K+ SWIE+ +VH F D +HP I++IH EL
Sbjct: 819 NIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELG 878
Query: 575 RASVQMKSV 583
R ++MK +
Sbjct: 879 RLHMEMKKL 887
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 238/455 (52%), Gaps = 28/455 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N IS ++ G ++A+Q+FD+M KDV +WN ++ GY Q+ +E+ L + M
Sbjct: 139 IFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQ 198
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYF----QAMPERNTATYNAMISGFLKHGRLEE 161
+ ++ M+ C D +D + F A + + A+I+ +K G +++
Sbjct: 199 DGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDD 258
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A ++F +PRR++I++T+M+ G + + +A L M + V V++ ++
Sbjct: 259 ALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNH 318
Query: 218 NERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E + + + RM + D ++V TA+++ + K G +E+A +F ++ ++ VS+ AM
Sbjct: 319 PEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAM 378
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAG+AQ+G EEA F+ MI+ ++P+ T +S+ ACS L +GRQ H +I+ G+
Sbjct: 379 IAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGY 438
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ V A+++MY++CG ++D+ F +I N+V+WN +I A+ QH Y+ A+ F
Sbjct: 439 ITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQA 498
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII-----PSSEHY-TCLVD 449
+ G PD TF S+L+ C +S D EL V +I S H LV
Sbjct: 499 LLKEGIKPDSSTFTSILNVC-------KSPDALELGKWVQSLIIRAGFESDLHIRNALVS 551
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+ G L A + MP E D W +++A V
Sbjct: 552 MFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFV 585
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 157/327 (48%), Gaps = 34/327 (10%)
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI----SYTAMLDGFMKKGEVDKARAL 196
+NT NA ++ K G+L EA + + ++ +Y+++L +K + +
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+++ F + PD +F+ +I+ + K G +
Sbjct: 127 HNHIKFSKI-------------------------QPD----IFMWNMLISMYAKCGNTNS 157
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A+ +F+ + KD S+N ++ GY Q+ EEA RL M++ ++PD T V + AC+
Sbjct: 158 AKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACAD 217
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
+ +++G + L++ G++ ++ V A+I M+ +CGG+ D+ F + +L++W ++
Sbjct: 218 AKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSM 277
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I A+H +++A F M G PD + F+SLL AC H + + + M +V G
Sbjct: 278 ITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEV-G 336
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ T L+ + ++ G +E A ++
Sbjct: 337 LDTEIYVGTALLSMYTKCGSMEDALEV 363
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 141/317 (44%), Gaps = 36/317 (11%)
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
E + K+ NA + ++ G EA+ + + +Q T S+ C + L
Sbjct: 62 EFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLG 121
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
+G + H + + + ++ + N +I+MY++CG ++ F ++ ++ SWN ++ +
Sbjct: 122 DGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYV 181
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM---------- 431
QH YE+A QM +G PD TF+ +L+AC A V++ +LF L+
Sbjct: 182 QHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLF 241
Query: 432 ------------------VKVYGIIPSSE--HYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+KV+ +P + +T ++ L+R Q ++A + Q M E
Sbjct: 242 VGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEG 301
Query: 472 ---DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV--MLSNLYAAAGMWRDV 526
D + SLL AC +E G+ +M+E+ ++ +YV L ++Y G D
Sbjct: 302 VQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVG-LDTEIYVGTALLSMYTKCGSMEDA 360
Query: 527 TRVRLLMKEQGVTKQCA 543
V L+K + V A
Sbjct: 361 LEVFNLVKGRNVVSWTA 377
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 133/313 (42%), Gaps = 51/313 (16%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQM 76
F IL + +PD+ + +IR + + NA +S G + +A LF+ M
Sbjct: 511 FTSILNVCKSPDAL-ELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDM 569
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAF 132
+D+++WN II G+ Q+G Q + + F+ M + +++ ++ C + + +
Sbjct: 570 PERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGR 629
Query: 133 DYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ E + +IS + K G +++A +F +P++NV S+T+M
Sbjct: 630 RLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSM-------- 681
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDKNVFVVT 242
ITGY ++ R EA ELF +M PD+ V ++
Sbjct: 682 -----------------------ITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALS 718
Query: 243 AMI-TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
A G K G+ + I+P+ + M+ + + G+ EA+ + KM ++
Sbjct: 719 ACAHAGLIKEGLHHFESMKDFNIEPR-MEHYGCMVDLFGRAGLLHEAVEFIN---KMQVK 774
Query: 302 PDDATLVSVFTAC 314
PD ++ AC
Sbjct: 775 PDSRLWGALLGAC 787
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/535 (36%), Positives = 303/535 (56%), Gaps = 44/535 (8%)
Query: 55 AKISALSRAGKISAARQLFDQMTT--KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
A I+ L+RAG + A +L+ + +D + NA+I+GY + G L+E+ +F+ M +++
Sbjct: 131 AMITGLARAGMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDV 190
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
+SW+ M+ G +I A + F+ MPERN T+ AMI G +K G E LF +M +
Sbjct: 191 ISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKE 250
Query: 173 -----NVISYTAMLDGFMKKGE-----------------------------------VDK 192
N + T M + + GE V +
Sbjct: 251 GFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVE 310
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
AR + D M+ K+VVSW +I GYV+N+ E LF + K+V T MITGF G
Sbjct: 311 ARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQ--KDVISWTTMITGFSNKG 368
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ + LF + +D +++ A+I+G+ NG EEA+ F M++ ++P+ TL SV +
Sbjct: 369 KMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLS 428
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
A + L LN+G Q H LV++ G E ++S+ N++++MY++CG + D F I+SPN+VS
Sbjct: 429 ASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVS 488
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
+N++I FAQ+G E+AL F +M G P+ ITFL +LSAC H G + + + F+ M
Sbjct: 489 FNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMK 548
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
+Y I P HY C+VD+L RAG L+ A + + MP E +GVWG+LL A I+L +++
Sbjct: 549 SLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVA 608
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
+LAA+++ +L+P N+A Y +LS LY++AG RD +VR+ +GV K YSWI
Sbjct: 609 KLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWI 663
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 206/362 (56%), Gaps = 11/362 (3%)
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
TTK ++ ++ IT + +NG L+E++++F MP KN +SW M+ +N I A F+
Sbjct: 27 TTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFE 86
Query: 137 AMPERNTATYNAMISGFLKHGRL--EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
MP+R TA+YNAMI+ + + + EA++LF +M RN ISY AM+ G + G VD A
Sbjct: 87 KMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAE 146
Query: 195 A--LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
L + +++ V +I+GY+K R EA +F M + D V ++M+ G+CK G
Sbjct: 147 ELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERD--VISWSSMVDGYCKKG 204
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVF 311
+ +AR LFER+ ++ V++ AMI G+ + G E LF M K ++ + TL +F
Sbjct: 205 KIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMF 264
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
ACS EG Q H LV R GFE +V + NA+I MY R ++++ F ++ ++V
Sbjct: 265 EACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVV 324
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SWN +IA + Q+ E+ + F + D I++ ++++ + GK+ +S++LF +M
Sbjct: 325 SWNALIAGYVQNDEVEEGYVLFEKTQ----QKDVISWTTMITGFSNKGKMGKSIELFRMM 380
Query: 432 VK 433
K
Sbjct: 381 PK 382
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 222/491 (45%), Gaps = 113/491 (23%)
Query: 46 STQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQ 105
+T+++ +++I+ R G + A +F +M K+ I+W A++T Y++NG + +++ +F+
Sbjct: 27 TTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFE 86
Query: 106 SMPVKNIVSWNCMIAGCIDND--RIDDAFDYFQAMPERNTATY----------------- 146
MP + S+N MI ++ I +A F M ERN+ +Y
Sbjct: 87 KMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAE 146
Query: 147 ----------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
NA+ISG+LK GRLEEATR+FE M R+VIS+++M+DG+ KKG++
Sbjct: 147 ELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKI 206
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD----------------- 233
AR L + M +NVV+WT MI G++K + LF RM
Sbjct: 207 GHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEA 266
Query: 234 ---------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
++ +VF+ A+I +C+ + AR +F+ + KD VS+
Sbjct: 267 CSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSW 326
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NA+IAGY QN EE LF + D
Sbjct: 327 NALIAGYVQNDEVEEGYVLFEKTQQKD--------------------------------- 353
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
V +IT +S G + S FR + + ++W +I+ F +G YE+A+ +
Sbjct: 354 ------VISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYW 407
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M P+ +T S+LSA +N+ + + L+VK+ G+ LV + +
Sbjct: 408 FIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKM-GMEFDLSIQNSLVSMYT 466
Query: 453 RAGQLEKAWQI 463
+ G + QI
Sbjct: 467 KCGNVADGHQI 477
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 43/283 (15%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+ NA I R + AR++FD M KDV++WNA+I GY QN ++E LF+
Sbjct: 292 VFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQ 351
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K+++SW MI G + ++ + + F+ MP+++ + A+ISGF+ +G EEA F +M
Sbjct: 352 KDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEM 411
Query: 170 PRR----NVISYTAMLDGFMKKGEVDKARALSDY-----MSFKNVVSWTVMITGYVKNER 220
R+ N ++ +++L +++ + M F + +++ Y K
Sbjct: 412 LRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQ-NSLVSMYTKCGN 470
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
+ ++F + N+ +MITGF + G E A
Sbjct: 471 VADGHQIFTSIN--SPNIVSFNSMITGFAQNGFGEEA----------------------- 505
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
L LF M+ +P++ T + V +AC+ + LL +G
Sbjct: 506 --------LELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQG 540
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 192/547 (35%), Positives = 310/547 (56%), Gaps = 48/547 (8%)
Query: 52 VNNAKISALSRAGKISA---ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
V+NA ++ + + A AR++ D+M KD +TW ++ GY + G + ++++F+ +
Sbjct: 196 VSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVD 255
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-ER---NTATYNAMIS-----GFLKHGR- 158
VK V WN MI+G + + + +AF+ F+ M ER + T+ +++S GF HG+
Sbjct: 256 VKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKS 315
Query: 159 -LEEATRLFEQ-MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
+ TRL +P + A++ + K G + AR + D M K+VVSW +++GYV
Sbjct: 316 VHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYV 375
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
E C L+ A +FE + K+ +S+ M+
Sbjct: 376 --ESSC-------------------------------LDKAVEVFEEMPYKNELSWMVMV 402
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+GY G +E+AL+LF+ M D++P D T +AC L L G+Q H +++ GFE
Sbjct: 403 SGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFE 462
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ S NA+ITMY+RCG + ++ L F + + + VSWN +I+A QHGH +AL F +M
Sbjct: 463 GSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRM 522
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G PD I+FL++L+AC H+G V+E FE M + +GIIP +HYT L+D+L RAG+
Sbjct: 523 VAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGR 582
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
+ +A + + MPFE +W ++L+ C + ++ELG AA ++ ++ PQ+ Y++LSN
Sbjct: 583 IGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNT 642
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
Y+AAG W D RVR LM+++GV K+ SWIE GNKVH F+ GD HP K++ L+
Sbjct: 643 YSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMV 702
Query: 577 SVQMKSV 583
+M+ +
Sbjct: 703 GARMRKL 709
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 221/508 (43%), Gaps = 77/508 (15%)
Query: 35 PHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNA-------I 87
PH + L+R + +++ + AL R L ++ T ++ +
Sbjct: 15 PHQCSVLLRRLAASRSLTSSSFLRAL---------RCLHARLLTSALLHAPPHPHLTLRL 65
Query: 88 ITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--RNTAT 145
I Y +G L + LF++ P V+ ++A R+ A +F A+P+ R+T
Sbjct: 66 IHLYTLSGDLPAAATLFRADPCP--VAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVL 123
Query: 146 YNAMISGFLKHGRLEEATRLFEQM-----PRRNVISYTAMLD--GFMKKGEVDKARAL-- 196
+NA+IS + + A +F + R + S+TA+L G + V L
Sbjct: 124 HNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQC 183
Query: 197 -------SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
+S N + M ++ R +AR++ MP DK+ T M+ G+
Sbjct: 184 SVLKSGAGGVLSVSNALVALYMKCEALEATR--DARKVLDEMP--DKDALTWTTMVVGYV 239
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
+ G + AR +FE + K V +NAMI+GY +G+ EA LF M+ + D+ T S
Sbjct: 240 RRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTS 299
Query: 310 VFTACSALQLLNEGRQSHVLVIR--NGF--EANVSVCNAVITMYSRCGGILDSELAFRQI 365
V +AC+ G+ H + R F EA + V NA++T+YS+CG I + F +
Sbjct: 300 VLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNM 359
Query: 366 HSPNLVSWNTIIAAFAQ------------------------------HGHY-EKALIFFS 394
S ++VSWNTI++ + + HG + E AL F+
Sbjct: 360 KSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFN 419
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M P T+ +SACG G + L +V++ G S+ L+ + +R
Sbjct: 420 RMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQL-GFEGSNSAGNALITMYARC 478
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAA 482
G +++A + MP D+ W ++++A
Sbjct: 479 GAVKEANLMFLVMP-NIDSVSWNAMISA 505
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 315/579 (54%), Gaps = 56/579 (9%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
A++ +L + ++ AA + + N +++ Y + G L +++ +F S+ +NIVS
Sbjct: 58 ARLRSLEQGREVHAA--ILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVS 115
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRL----- 165
W MI + ++ +AF ++ M + + T+ ++++ F L+ ++
Sbjct: 116 WTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIV 175
Query: 166 ---FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
E PR T+++ + K G++ KAR + D + KNVV+WT++I GY + +
Sbjct: 176 EAGLELEPRVG----TSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVD 231
Query: 223 EARELFYRM------PD-------------------------------YDKNVFVVTAMI 245
A EL M P+ Y + ++VV ++I
Sbjct: 232 VALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLI 291
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
T +CK G LE AR LF + +D V++ AM+ GYAQ G +EA+ LF M + ++PD
Sbjct: 292 TMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKM 351
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T SV T+CS+ L EG++ H ++ G+ +V + +A+++MY++CG + D+ L F Q+
Sbjct: 352 TFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQM 411
Query: 366 HSPNLVSWNTIIAAF-AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
N+V+W II AQHG +AL +F QM G PD +TF S+LSAC H G V E
Sbjct: 412 SERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEG 471
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
F M YGI P EHY+C VD+L RAG LE+A + MPF VWG+LL+AC
Sbjct: 472 RKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACR 531
Query: 485 INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAY 544
++ +VE GE AA+ + +LDP + YV LS++YAAAG + D +VR +M+++ V K+
Sbjct: 532 VHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQ 591
Query: 545 SWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
SWIE+ KVH F D SHP ++I++EL + + Q+K +
Sbjct: 592 SWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEM 630
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
+ G +EAL + + MI + + C+ L+ L +GR+ H ++++G + N
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
+ N +++MY++CG + D+ F I N+VSW +I AF +A + M L G
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG 143
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY------GIIPSSEHYTCLVDILSRA 454
PD +TF+SLL+A + +L +L KV+ G+ T LV + ++
Sbjct: 144 CKPDKVTFVSLLNAFTNP-------ELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKC 196
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAA 482
G + KA I +P E + W L+A
Sbjct: 197 GDISKARVIFDRLP-EKNVVTWTLLIAG 223
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 153/340 (45%), Gaps = 38/340 (11%)
Query: 14 RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY---VFVNNAKISALSRAGKISAAR 70
+I F IL+ +TP + H + + Y ++V N+ I+ + G + AR
Sbjct: 249 KITFASILQGCTTPAA----LEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEAR 304
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDND 126
+LF + +DV+TW A++TGY Q GF E+ NLF+ M + I +++ ++ C
Sbjct: 305 KLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPA 364
Query: 127 RIDDAFDYFQAMPERNTATYN-------AMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
+ + Q + A YN A++S + K G +++A+ +F QM RNV+++TA
Sbjct: 365 FLQEGKRIHQQLVH---AGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTA 421
Query: 180 MLDG-FMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELFYRM-PD 233
++ G + G +A D M + + V++T +++ E R+ F M D
Sbjct: 422 IITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLD 481
Query: 234 YDKNVFV--VTAMITGFCKVGMLENAR--LLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
Y V + + + G LE A +L P V + A+++ + E
Sbjct: 482 YGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSV-WGALLSACRVHSDVERGE 540
Query: 290 RLFSGMIKMDMQPDD----ATLVSVFTACSALQLLNEGRQ 325
R ++K+D PDD L S++ A + + RQ
Sbjct: 541 RAAENVLKLD--PDDDGAYVALSSIYAAAGRYEDAEKVRQ 578
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 193/535 (36%), Positives = 303/535 (56%), Gaps = 44/535 (8%)
Query: 55 AKISALSRAGKISAARQLFDQMTT--KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
A I+ L+RAG + A +L+ + +D + NA+I+GY + G L+E+ +F+ M +++
Sbjct: 210 AMITGLARAGMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDV 269
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
+SW+ M+ G +I A + F+ MPERN T+ AMI G +K G E LF +M +
Sbjct: 270 ISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKE 329
Query: 173 -----NVISYTAMLDGFMKKGE-----------------------------------VDK 192
N + T M + + GE V +
Sbjct: 330 GFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVE 389
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
AR + D M+ K+VVSW +I GYV+N+ E LF + K+V T MITGF G
Sbjct: 390 ARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEK--TQQKDVISWTTMITGFSNKG 447
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ + LF + +D +++ A+I+G+ NG EEA+ F M++ ++P+ TL SV +
Sbjct: 448 KMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLS 507
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
A + L LN+G Q H LV++ G E ++S+ N++++MY++CG + D F I+SPN+VS
Sbjct: 508 ASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVS 567
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
+N++I FAQ+G E+AL F +M G P+ ITFL +LSAC H G + + + F+ M
Sbjct: 568 FNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMK 627
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
+Y I P HY C+VD+L RAG L+ A + + MP E +GVWG+LL A I+L +++
Sbjct: 628 SLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVA 687
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
+LAA+++ +L+P N+A Y +LS LY++AG RD +VR+ +GV K YSWI
Sbjct: 688 KLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWI 742
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 206/362 (56%), Gaps = 11/362 (3%)
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
TTK ++ ++ IT + +NG L+E++++F MP KN +SW M+ +N I A F+
Sbjct: 106 TTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFE 165
Query: 137 AMPERNTATYNAMISGFLKHGRL--EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
MP+R TA+YNAMI+ + + + EA++LF +M RN ISY AM+ G + G VD A
Sbjct: 166 KMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAE 225
Query: 195 A--LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
L + +++ V +I+GY+K R EA +F M + D V ++M+ G+CK G
Sbjct: 226 ELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERD--VISWSSMVDGYCKKG 283
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVF 311
+ +AR LFER+ ++ V++ AMI G+ + G E LF M K ++ + TL +F
Sbjct: 284 KIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMF 343
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
ACS EG Q H LV R GFE +V + NA+I MY R ++++ F ++ ++V
Sbjct: 344 EACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVV 403
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SWN +IA + Q+ E+ + F + D I++ ++++ + GK+ +S++LF +M
Sbjct: 404 SWNALIAGYVQNDEVEEGYVLFEKTQ----QKDVISWTTMITGFSNKGKMGKSIELFRMM 459
Query: 432 VK 433
K
Sbjct: 460 PK 461
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 222/491 (45%), Gaps = 113/491 (23%)
Query: 46 STQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQ 105
+T+++ +++I+ R G + A +F +M K+ I+W A++T Y++NG + +++ +F+
Sbjct: 106 TTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFE 165
Query: 106 SMPVKNIVSWNCMIAGCIDND--RIDDAFDYFQAMPERNTATY----------------- 146
MP + S+N MI ++ I +A F M ERN+ +Y
Sbjct: 166 KMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAE 225
Query: 147 ----------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
NA+ISG+LK GRLEEATR+FE M R+VIS+++M+DG+ KKG++
Sbjct: 226 ELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKI 285
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD----------------- 233
AR L + M +NVV+WT MI G++K + LF RM
Sbjct: 286 GHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEA 345
Query: 234 ---------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
++ +VF+ A+I +C+ + AR +F+ + KD VS+
Sbjct: 346 CSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSW 405
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NA+IAGY QN EE LF + D
Sbjct: 406 NALIAGYVQNDEVEEGYVLFEKTQQKD--------------------------------- 432
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
V +IT +S G + S FR + + ++W +I+ F +G YE+A+ +
Sbjct: 433 ------VISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYW 486
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M P+ +T S+LSA +N+ + + L+VK+ G+ LV + +
Sbjct: 487 FIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKM-GMEFDLSIQNSLVSMYT 545
Query: 453 RAGQLEKAWQI 463
+ G + QI
Sbjct: 546 KCGNVADGHQI 556
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 43/283 (15%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+ NA I R + AR++FD M KDV++WNA+I GY QN ++E LF+
Sbjct: 371 VFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQ 430
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K+++SW MI G + ++ + + F+ MP+++ + A+ISGF+ +G EEA F +M
Sbjct: 431 KDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEM 490
Query: 170 PRR----NVISYTAMLDGFMKKGEVDKARALSDY-----MSFKNVVSWTVMITGYVKNER 220
R+ N ++ +++L +++ + M F + +++ Y K
Sbjct: 491 LRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQ-NSLVSMYTKCGN 549
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
+ ++F + N+ +MITGF + G E A
Sbjct: 550 VADGHQIFTSIN--SPNIVSFNSMITGFAQNGFGEEA----------------------- 584
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
L LF M+ +P++ T + V +AC+ + LL +G
Sbjct: 585 --------LELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQG 619
>gi|255560453|ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539509|gb|EEF41097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 662
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 206/613 (33%), Positives = 309/613 (50%), Gaps = 115/613 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG-------------- 95
++ +N KIS +R G+I+ AR LFD++ ++ +TWN++I+GY + G
Sbjct: 47 LYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMPE 106
Query: 96 --------------------FLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF 135
F++E +NLF MP + VSWN MI+G N R+D+A F
Sbjct: 107 RDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALGLF 166
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS------------------- 176
MPE+N+ ++NAM+SGFL++G + A F++MP R+V S
Sbjct: 167 NTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSGLIQNSELDQAER 226
Query: 177 ------------------YTAMLDGFMKKGEVDKARALSDYMSF-------------KNV 205
Y ++ G+ ++G VD+A+ L D + F +NV
Sbjct: 227 ILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNV 286
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYD--------------------KNVF------ 239
VSW MI YVK AR+LF +MPD D N+F
Sbjct: 287 VSWNTMIMCYVKAGDVISARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASNLFHKMPSP 346
Query: 240 ---VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
MI+G+ + G LE A FER+ K+ VS+N++IAGY +NG A+ LF M
Sbjct: 347 DTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGAINLFIQMQ 406
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ D TL S+ + S + L G Q H LV + +V + NA+ITMYSRCG I
Sbjct: 407 VEGEKSDRHTLSSLLSVSSGIVDLQLGMQIHQLVSKTVI-PDVPLNNALITMYSRCGAIF 465
Query: 357 DSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++ F ++ ++SWN +I +A HG+ +AL F M P ITF+S+L+AC
Sbjct: 466 EARTIFYEMKLQKEVISWNAMIGGYASHGYATEALELFKLMRSFKVQPTYITFISVLNAC 525
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
HAG V E +FE MV YG+ P EH+ LVDI+ R GQLE+A + M E D V
Sbjct: 526 AHAGLVEEGRRIFESMVSDYGVEPRVEHFASLVDIVGRQGQLEEALDLINSMTIEPDKAV 585
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WG+LL A ++ NVE+ +AA+ + +L+P +S Y++L N+Y G W + +R +M+
Sbjct: 586 WGALLGASRVHNNVEMARVAAEALMKLEPDSSVPYILLYNMYVDVGQWDNAAEIRSMMER 645
Query: 536 QGVTKQCAYSWIE 548
+ K+ A SW++
Sbjct: 646 NNIKKEAAISWVD 658
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 184/375 (49%), Gaps = 48/375 (12%)
Query: 137 AMPER--------NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
AMP R N + N IS F + GR+ EA LF+++ RRN +++ +M+ G++K+G
Sbjct: 33 AMPPRAKTSVEDSNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRG 92
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYV--KNERFC-EARELFYRMPDYDKNVFVVTAMI 245
E+ KAR L D M ++VVSW ++I+GYV + +RF E R LF +MP ++ MI
Sbjct: 93 EMTKARKLFDEMPERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMP--ERCCVSWNTMI 150
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+G+ K G ++ A LF + K+ VS+NAM++G+ QNG A+ F M + D+ A
Sbjct: 151 SGYAKNGRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSA 210
Query: 306 TLVSVFTACSALQ-----LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
LVS S L LL+ G E V N +I Y + G + +++
Sbjct: 211 -LVSGLIQNSELDQAERILLDYGNNG------GSKEYLVHAYNTLIAGYGQRGRVDEAQN 263
Query: 361 AFRQI-------------HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
F +I N+VSWNT+I + + G A F QM D D +
Sbjct: 264 LFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMP----DRDSFS 319
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+ +++S H + E+ +LF M P + + ++ +++G LE A + M
Sbjct: 320 WNTMISGYVHVLDMEEASNLFHKMPS-----PDTLSWNLMISGYAQSGSLELAHDFFERM 374
Query: 468 PFEADTGVWGSLLAA 482
P + + W S++A
Sbjct: 375 P-QKNLVSWNSVIAG 388
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 172/346 (49%), Gaps = 32/346 (9%)
Query: 106 SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
S+ N+ S N I+ RI++A F + RNT T+N+MISG++K G + +A +L
Sbjct: 41 SVEDSNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKL 100
Query: 166 FEQMPRRNVISYTAMLDGFMK---KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
F++MP R+V+S+ ++ G++ K +++ R L D M + VSW MI+GY KN R
Sbjct: 101 FDEMPERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMD 160
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
EA LF MP +KN AM++GF + G + A F+R+ +D S +A+++G QN
Sbjct: 161 EALGLFNTMP--EKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSGLIQN 218
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN--------- 333
++A R+ +D + + + A + L + G++ V +N
Sbjct: 219 SELDQAERIL-----LDYGNNGGSKEYLVHAYNTL-IAGYGQRGRVDEAQNLFDKIPFYN 272
Query: 334 --------GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
FE NV N +I Y + G ++ + F Q+ + SWNT+I+ +
Sbjct: 273 DQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFSWNTMISGYVHVLD 332
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
E+A F +M PD +++ ++S +G + + D FE M
Sbjct: 333 MEEASNLFHKMP----SPDTLSWNLMISGYAQSGSLELAHDFFERM 374
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 207/633 (32%), Positives = 325/633 (51%), Gaps = 98/633 (15%)
Query: 43 RLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
R+ TQ+ +F+ N + + G + AR++FD M ++ +WNA++ + G L E
Sbjct: 44 RIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDE 103
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMIS---- 151
+ NLF+ MP ++ SWN M++G DR ++A + M N ++ + +S
Sbjct: 104 ALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAG 163
Query: 152 ------GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV 205
G HG + ++ +V +A++D + K V A+ D M +N+
Sbjct: 164 LMDLSIGVQIHGLIAKSRYSL------DVYMGSALVDMYSKCRVVASAQRAFDDMDVRNI 217
Query: 206 VSWTVMITGYVKNERFCEARELFYRM------PD-------------------------- 233
VSW +IT Y +N +A E+F RM PD
Sbjct: 218 VSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHAR 277
Query: 234 ------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD------------------- 268
Y ++ + A++ + K + ARL+F+R+ +D
Sbjct: 278 VMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKA 337
Query: 269 ------------CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
VS+NA+IAGY QNG EEA+RLF + + + P T ++ AC+
Sbjct: 338 ARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACAN 397
Query: 317 LQLLNEGRQSHVLVIRNGF------EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
L L GRQ+H ++++GF ++++ V N++I MY +CG + D L F ++ +
Sbjct: 398 LADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDN 457
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
VSWN +I +AQ+G+ +AL F +M ++G PD +T + +LSAC HAG V E F+
Sbjct: 458 VSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQS 517
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M +G++P +HYTC+VD+L RAG L++A + Q MP E D VWGSLLAAC ++ N+
Sbjct: 518 MTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNIT 577
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
LG+ A+++ E+DP NS YV+LSN+YA G W+DV RVR M++ GV KQ SWI I
Sbjct: 578 LGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQ 637
Query: 551 NKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+ +H F+ D HP I+L LK + QMK V
Sbjct: 638 SHLHVFMVKDKRHPHKKDIYLILKILTEQMKRV 670
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 44/188 (23%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D + + C + + E R H +I+ F + + + N ++ +Y +CG + D+ F
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 363 RQIHSPNLVSWNTIIAA-------------------------------FAQHGHYEKALI 391
+ N SWN ++ A FAQ +E+AL
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY------T 445
F M F + +F S LSAC AG MDL + V+++G+I S + +
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSAC--AGL----MDL-SIGVQIHGLIAKSRYSLDVYMGS 190
Query: 446 CLVDILSR 453
LVD+ S+
Sbjct: 191 ALVDMYSK 198
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 179/495 (36%), Positives = 282/495 (56%), Gaps = 5/495 (1%)
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND---RIDDAFDYFQAMPERNTATYNAM 149
+ G L ++ F S +K ++NC++AG R+ DA F ++P +T +YN +
Sbjct: 24 RRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTL 83
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+S G ++ A R+F MP ++V S+ M+ G K G ++A A+ M +N VSW
Sbjct: 84 LSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWN 143
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
M+ + A +LF P+ + + TAM++G+ G ++ A F + ++
Sbjct: 144 AMVAALACSGDMGAAEDLFRNAPE-KTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNL 202
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDM-QPDDATLVSVFTACSALQLLNEGRQSHV 328
VS+NA++AGY +N A++ALR+F M++ + QP+ +TL SV CS L L GRQ H
Sbjct: 203 VSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQ 262
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
++ NV+V ++++MY +CG + D+ F ++ + ++V+WN +I+ +AQHG +
Sbjct: 263 WCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQ 322
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
A+ F +M G PD IT L++L+AC H G + + FE M + Y I P +HY+C+V
Sbjct: 323 AIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMV 382
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
D+L RAG LE+A + MPFE +G+LL AC + N+E E AA+K+ E DPQN+
Sbjct: 383 DLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAG 442
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDK 568
YV L+N+YA A W DV+RVR MK+ V K YSW+EI H F D HP +
Sbjct: 443 AYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGL 502
Query: 569 IHLELKRASVQMKSV 583
IH +L R + MK++
Sbjct: 503 IHDKLDRLQMLMKAM 517
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 191/390 (48%), Gaps = 59/390 (15%)
Query: 34 TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQ 93
T + NCL+ + AK S L R ++ AR+LFD + D +++N +++ ++
Sbjct: 42 TTTTYNCLLAGY---------AKASGLIR---LADARRLFDSIPHPDTVSYNTLLSCHFA 89
Query: 94 NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
G + ++ +F +MPVK++ SWN M++G N ++A F+ MP RN ++NAM++
Sbjct: 90 CGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAAL 149
Query: 154 LKHGRLEEATRLFEQMPRR-NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
G + A LF P + + I +TAM+ G+M G V KA M +N+VSW ++
Sbjct: 150 ACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVV 209
Query: 213 TGYVKNERFCEARELFYRMPD--------------------------------------Y 234
GYVKN R +A +F M +
Sbjct: 210 AGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPL 269
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+NV V T++++ +CK G L +A +F+ + KD V++NAMI+GYAQ+G +A++LF
Sbjct: 270 SRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEK 329
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCG 353
M + PD TL++V TAC L + G Q + E + + ++ + R G
Sbjct: 330 MKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAG 389
Query: 354 GILDSELAFRQIHS----PNLVSWNTIIAA 379
+ E A IHS P+ ++ T++ A
Sbjct: 390 LL---ERAVNMIHSMPFEPHPSAYGTLLTA 416
>gi|222635245|gb|EEE65377.1| hypothetical protein OsJ_20684 [Oryza sativa Japonica Group]
Length = 769
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 288/509 (56%), Gaps = 44/509 (8%)
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF 135
M KD + + +++G+ +NG L E++ L K + D D+ DA
Sbjct: 1 MPAKDSASLSTMVSGFTKNGMLHEAEELL----TKRL--------SVTDMDKAVDA---- 44
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR--------------RNVISYTAML 181
YN +I + + GR +A RLF+ +P+ RNV+S+ +M+
Sbjct: 45 ----------YNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMM 94
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
++K G+V ARAL + M K++VSW MI+GY + E+ +LF+ MPD D + +
Sbjct: 95 ICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNL 154
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
+I GF + G E+AR F+R+ + +S+N MI+GY +NG +++LFS M+++
Sbjct: 155 --IIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEI 212
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD T SV AC+++ +L G Q H LV ++ F + ++ NA+ITMYSRCG + D+E
Sbjct: 213 PDRHTFSSVLAACASIPMLGLGAQIHQLVEKS-FVPDTAISNALITMYSRCGALNDAEAI 271
Query: 362 FRQIHSP-NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F+Q+H+ +LVSWN +I + HG KAL F +M P ITF+SLLSAC +AG
Sbjct: 272 FKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGL 331
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
V+E +F+ MV YGI+ EHY LV+++ R GQL+ A ++ MP D VWG+ L
Sbjct: 332 VSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFL 391
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
AC N L ++AAK++ ++P +SA YV++ NL+A G W VR M+ QG+ K
Sbjct: 392 GACTAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYK 451
Query: 541 QCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
Q YSWI++ K+H F+ GD HP +I
Sbjct: 452 QPGYSWIDLEGKMHVFISGDTWHPNAQEI 480
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 190/395 (48%), Gaps = 35/395 (8%)
Query: 54 NAKISALSRAGKISAARQLFDQMTT--------------KDVITWNAIITGYWQNGFLQE 99
N I A +AG+ S A++LFD + ++V++WN+++ Y + G +
Sbjct: 46 NTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCS 105
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
++ LF MP K++VSWN MI+G + ++ F MP+ +T ++N +I GF++ G
Sbjct: 106 ARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEA 165
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKG----------EVDKARALSDYMSFKNVVSWT 209
E A F++MP R IS+ M+ G+ K G ++ + + D +F +V++
Sbjct: 166 EHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAAC 225
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ-PKD 268
I + + E + +PD + A+IT + + G L +A +F+++ KD
Sbjct: 226 ASIPMLGLGAQIHQLVEKSF-VPD----TAISNALITMYSRCGALNDAEAIFKQMHTKKD 280
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-H 327
VS+NA+I Y +G A +AL+LF M + + P T VS+ +AC L++EGR
Sbjct: 281 LVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFD 340
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
+V G A + A++ + R G + D+ E+ +P+ W + A
Sbjct: 341 TMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGACT--AKK 398
Query: 387 EKALIFFSQMGLNGFDPD-GITFLSLLSACGHAGK 420
+ L + L+ +PD ++ + + H GK
Sbjct: 399 NEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGK 433
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQM-TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
++NA I+ SR G ++ A +F QM T KD+++WNA+I Y +G ++ LF+ M
Sbjct: 251 ISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRA 310
Query: 111 NI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEE 161
+ +++ +++ C++ + + F M Y A+++ +HG+L++
Sbjct: 311 KVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDD 370
Query: 162 ATRLFEQMP 170
A + MP
Sbjct: 371 ALEVINSMP 379
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 174/444 (39%), Positives = 273/444 (61%), Gaps = 12/444 (2%)
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
CM A C + D+ F MPERN T+NAMI G+L +G + A LFE+M R ++
Sbjct: 137 CMYAKC---GNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVT 193
Query: 177 YTAMLDGFMKKGEVDKARALSDYM--SFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
+ M+DGF + G+ + AR D + +NVV+WTVM+ GY +N ARE+F MP
Sbjct: 194 WIEMIDGFARSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMPQ- 252
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+N F ++MI+G+CK G ++ AR +F+RI ++ V++N++I+GYAQNG +EEAL F
Sbjct: 253 -RNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGK 311
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M +PD+ T+ SV +ACS L LL+ G++ H ++ G + N V N ++ MY++CG
Sbjct: 312 MQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGD 371
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ ++ L F + N WN++I+ FA HG ++AL FF +M + PD ITFLS+LSA
Sbjct: 372 LANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSA 431
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G VN +++F M K YG+ +HY CL+D+L RAG++++A+ + + MP + +
Sbjct: 432 CAHGGFVNAGLEIFSRMEK-YGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDV 490
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAV----YVMLSNLYAAAGMWRDVTRVR 530
VWG+LL AC ++L++E+ + +++ ++D S+ YV+LSN+YAA+ W ++R
Sbjct: 491 VWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMR 550
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVH 554
+ M +G K S I GN H
Sbjct: 551 MEMANKGFQKTSGCSSIMPGNNTH 574
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 188/380 (49%), Gaps = 40/380 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + + + ++ G + +R++FD M ++ +TWNA+I GY NG + + LF+ M +
Sbjct: 129 VMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSI 188
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--RNTATYNAMISGFLKHGRLEEATRLFE 167
+ V+W MI G + + A +F +P RN T+ M+ G+ ++ +E A +FE
Sbjct: 189 RTAVTWIEMIDGFARSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFE 248
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
MP+RN ++++M+ G+ KKG V +AR++ D + +N+V+W +I+GY +N EA E
Sbjct: 249 GMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEA 308
Query: 228 FYRM------PD-------------------------------YDKNVFVVTAMITGFCK 250
F +M PD N FV+ ++ + K
Sbjct: 309 FGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAK 368
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G L NARL+FE + ++ +N+MI+G+A +G ++EAL F M PD+ T +SV
Sbjct: 369 CGDLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSV 428
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPN 369
+AC+ +N G + + + G + +I + R G I ++ +L R PN
Sbjct: 429 LSACAHGGFVNAGLEIFSRMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPN 488
Query: 370 LVSWNTIIAAFAQHGHYEKA 389
V W ++ A H E A
Sbjct: 489 DVVWGALLGACRVHLDMEMA 508
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 136/281 (48%), Gaps = 35/281 (12%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D +V + T+++ + K G + ++R +F+ + ++ V++NAMI GY NG ++ A+ LF
Sbjct: 126 DFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEK 185
Query: 295 M--------IKM-----------------DMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
M I+M D P + V +T + + R + +
Sbjct: 186 MSIRTAVTWIEMIDGFARSGDTETARRFFDDVPSELRNVVTWT----VMVDGYARNAEME 241
Query: 330 VIRNGFEA----NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
R FE N +++I+ Y + G + ++ F +I NLV+WN++I+ +AQ+G
Sbjct: 242 AAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGF 301
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E+AL F +M GF+PD +T S+LSAC G ++ + +M GI +
Sbjct: 302 SEEALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMM-NHKGIKLNQFVLN 360
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LVD+ ++ G L A I +GM + W S+++ I+
Sbjct: 361 GLVDMYAKCGDLANARLIFEGMAHR-NRACWNSMISGFAIH 400
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 108/216 (50%), Gaps = 9/216 (4%)
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+I Y G EAL +++G+ + + + V AC++L ++ G+ H I+NG
Sbjct: 66 LIRSYLSQGAPREALLVYTGLRRKGVYLLGVAPL-VLKACASLSIVKHGKALHAESIKNG 124
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ +V + +++ MY++CG ++DS F + N V+WN +I + +G + A++ F
Sbjct: 125 VDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFE 184
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M + +T++ ++ +G + F+ V + + +T +VD +R
Sbjct: 185 KMSIR----TAVTWIEMIDGFARSGDTETARRFFD---DVPSELRNVVTWTVMVDGYARN 237
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
++E A ++ +GMP + + W S+++ NV+
Sbjct: 238 AEMEAAREVFEGMP-QRNFFAWSSMISGYCKKGNVK 272
>gi|302142753|emb|CBI19956.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 174/444 (39%), Positives = 273/444 (61%), Gaps = 12/444 (2%)
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
CM A C + D+ F MPERN T+NAMI G+L +G + A LFE+M R ++
Sbjct: 8 CMYAKC---GNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVT 64
Query: 177 YTAMLDGFMKKGEVDKARALSDYM--SFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
+ M+DGF + G+ + AR D + +NVV+WTVM+ GY +N ARE+F MP
Sbjct: 65 WIEMIDGFARSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMPQ- 123
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+N F ++MI+G+CK G ++ AR +F+RI ++ V++N++I+GYAQNG +EEAL F
Sbjct: 124 -RNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGK 182
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M +PD+ T+ SV +ACS L LL+ G++ H ++ G + N V N ++ MY++CG
Sbjct: 183 MQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGD 242
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ ++ L F + N WN++I+ FA HG ++AL FF +M + PD ITFLS+LSA
Sbjct: 243 LANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSA 302
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G VN +++F M K YG+ +HY CL+D+L RAG++++A+ + + MP + +
Sbjct: 303 CAHGGFVNAGLEIFSRMEK-YGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDV 361
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAV----YVMLSNLYAAAGMWRDVTRVR 530
VWG+LL AC ++L++E+ + +++ ++D S+ YV+LSN+YAA+ W ++R
Sbjct: 362 VWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMR 421
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVH 554
+ M +G K S I GN H
Sbjct: 422 MEMANKGFQKTSGCSSIMPGNNTH 445
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 184/369 (49%), Gaps = 40/369 (10%)
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA 120
++ G + +R++FD M ++ +TWNA+I GY NG + + LF+ M ++ V+W MI
Sbjct: 11 AKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMID 70
Query: 121 GCIDNDRIDDAFDYFQAMPE--RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYT 178
G + + A +F +P RN T+ M+ G+ ++ +E A +FE MP+RN +++
Sbjct: 71 GFARSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWS 130
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------P 232
+M+ G+ KKG V +AR++ D + +N+V+W +I+GY +N EA E F +M P
Sbjct: 131 SMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEP 190
Query: 233 D-------------------------------YDKNVFVVTAMITGFCKVGMLENARLLF 261
D N FV+ ++ + K G L NARL+F
Sbjct: 191 DEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIF 250
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
E + ++ +N+MI+G+A +G ++EAL F M PD+ T +SV +AC+ +N
Sbjct: 251 EGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVN 310
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAF 380
G + + + G + +I + R G I ++ +L R PN V W ++ A
Sbjct: 311 AGLEIFSRMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALLGAC 370
Query: 381 AQHGHYEKA 389
H E A
Sbjct: 371 RVHLDMEMA 379
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 186/554 (33%), Positives = 298/554 (53%), Gaps = 50/554 (9%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ A+I Y + + N+F MP++++V+WN M+AG ++ A + M
Sbjct: 133 DLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQ 192
Query: 140 ER-----NTATYNAMISGFLKHGRLEEAT-------RLFEQMPRRNVISYTAMLDGFMKK 187
+R N +T +++ +HG L + T R + V+ TA+LD + K
Sbjct: 193 DRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKC 252
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM---------------- 231
+ A + M+ +N V+W+ +I G+V +R EA LF M
Sbjct: 253 KHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASA 312
Query: 232 ----------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
++ ++++ + K G++ A +LF+ I KD
Sbjct: 313 LRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDT 372
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+S+ A+++GY QNG AEEA +F M ++QPD AT+VS+ ACS L L GR SH
Sbjct: 373 ISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGS 432
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
VI G S+CN++I MY++CG I S F ++ + ++VSWNT+IA + HG ++A
Sbjct: 433 VIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEA 492
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
F M GF+PD +TF+ L++AC H+G V E F+ M YGI+P EHY C+VD
Sbjct: 493 TTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVD 552
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L+R G L++A+Q Q MP +AD VWG+LL AC I+ N++LG+ ++ +++L P+ +
Sbjct: 553 LLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGN 612
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
+V+LSN+++AAG + + VR++ K +G K SWIEI +H F+GGD SHPC I
Sbjct: 613 FVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDI 672
Query: 570 HLELKRASVQMKSV 583
+ EL + +K +
Sbjct: 673 YHELDNILIDIKKL 686
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 189/414 (45%), Gaps = 27/414 (6%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
+ V + A + ++ + A ++F MT ++ +TW+A+I G+ + E+ NLF+ M
Sbjct: 237 EQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDM 296
Query: 108 PVKNI-------VSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGR 158
V+ + V+ + + + R+ A + N+++S + K G
Sbjct: 297 LVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGL 356
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK- 217
+ EAT LF+++ ++ ISY A+L G+++ G+ ++A + M NV + +
Sbjct: 357 INEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPA 416
Query: 218 -------NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
C + R + + + ++I + K G ++ +R +F+++ +D V
Sbjct: 417 CSHLAALQHGRCSHGSVIIRGLALETS--ICNSLIDMYAKCGRIDLSRQVFDKMPARDIV 474
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVL 329
S+N MIAGY +G+ +EA LF M +PDD T + + ACS L+ EG+ +
Sbjct: 475 SWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTM 534
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIAAFAQHGHYE 387
+ G + ++ + +R GG LD F Q ++ W ++ A H + +
Sbjct: 535 THKYGILPRMEHYICMVDLLAR-GGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNID 593
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSAC-GHAGKVNESMDLFELMVKVYGIIPS 440
S+M + P+G LLS AG+ +E+ ++ ++ KV G S
Sbjct: 594 LGKQ-VSRM-IQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV-RIIQKVKGFKKS 644
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 181/458 (39%), Gaps = 83/458 (18%)
Query: 106 SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
S VK+ W + I ++ A F +P + YNA+I + G A L
Sbjct: 27 SHEVKDNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDL 86
Query: 166 FEQM------PRRNVISY---------------------------------TAMLDGFMK 186
+ M P + + TA++D +++
Sbjct: 87 YRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIR 146
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD------------- 233
A + M ++VV+W M+ GY + + A M D
Sbjct: 147 CARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVS 206
Query: 234 -------------------------YDKN---VFVVTAMITGFCKVGMLENARLLFERIQ 265
D+N V + TA++ + K L A +F +
Sbjct: 207 LLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMT 266
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV-SVFTACSALQLLNEGR 324
++ V+++A+I G+ EA LF M+ M AT V S C++L L G
Sbjct: 267 VRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGT 326
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H L+ ++G A+++ N++++MY++ G I ++ + F +I + +S+ +++ + Q+G
Sbjct: 327 QLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNG 386
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
E+A + F +M PD T +SL+ AC H + V + G+ +
Sbjct: 387 KAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHG-RCSHGSVIIRGLALETSIC 445
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+D+ ++ G+++ + Q+ MP D W +++A
Sbjct: 446 NSLIDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAG 482
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G L AR +F+RI D ++NA+I Y+ G A+ L+ M+ + P+ T V
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
ACSAL L GR H G ++ V A+I +Y RC + F ++ ++V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
+WN ++A +A HG Y A+ M G P+ T +SLL G + + +
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 431 MVKVYGIIPSSEHY----TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
++ Y + +E T L+D+ ++ L A ++ GM + W +L+ V+
Sbjct: 227 CLRAY--LDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEV-TWSALIGGFVL 282
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 160/363 (44%), Gaps = 13/363 (3%)
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE----VDKARALSDYMSFKNVVSWT 209
+ G+L A ++F+++P + +Y A++ + +G +D R++ + N ++
Sbjct: 44 IARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFP 103
Query: 210 VMITGYVKNERFCEARELFYRMP--DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
++ C R + ++FV TA+I + + A +F ++ +
Sbjct: 104 FVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMR 163
Query: 268 DCVSFNAMIAGYAQNGVAEEAL-RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
D V++NAM+AGYA +G+ A+ L + ++P+ +TLVS+ + L +G
Sbjct: 164 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSV 223
Query: 327 HVLVIRNGFEAN---VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
H +R + N V + A++ MY++C ++ + F + N V+W+ +I F
Sbjct: 224 HAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLC 283
Query: 384 GHYEKALIFFSQMGLNGFD-PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+A F M + G + S L C + L L+ K GI
Sbjct: 284 DRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKS-GIHADLT 342
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
L+ + ++AG + +A + + + DT +G+LL+ V N E L KKM+
Sbjct: 343 AGNSLLSMYAKAGLINEATMLFDEIAIK-DTISYGALLSGYVQNGKAEEAFLVFKKMQAC 401
Query: 503 DPQ 505
+ Q
Sbjct: 402 NVQ 404
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 295/527 (55%), Gaps = 45/527 (8%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
AR++ D+M KD +TW ++ GY + G + ++++F+ + K V WN MI+G + +
Sbjct: 220 ARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMC 279
Query: 129 DDAFDYFQAMPERNTA----TYNAMIS-----GFLKHGRLEEATRLFEQ---MPRRNVIS 176
DAF+ F+ M T+ +++S GF HG+ + Q +P +
Sbjct: 280 ADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPV 339
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
A++ + K G++ A+ + D M+ K+VVSW +++GY+ +
Sbjct: 340 NNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDS------------------ 381
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
G L+ A +F+ + K+ +S+ M++GY G++E+AL+LF+ M
Sbjct: 382 ---------------GCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 426
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
D++P D T AC L L GRQ H +++ GFEA+ S NA++TMY++CG +
Sbjct: 427 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVN 486
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ L F + + + VSWN +I+A QHGH +AL F QM G DPD I+FL++L+AC
Sbjct: 487 DARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN 546
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
HAG V+E FE M + +GI P +HY L+D+L R+G++ +A + + MPFE +W
Sbjct: 547 HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIW 606
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
++L+ C N ++E G AA ++ + PQ+ Y++LSN Y+AAG W D RVR LM+++
Sbjct: 607 EAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 666
Query: 537 GVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
GV K+ SWIE+G+K+H FL GD HP +++ L+ +M+ +
Sbjct: 667 GVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKL 713
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 182/396 (45%), Gaps = 30/396 (7%)
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEATRL 165
P + ++A R+ DA +F A+P R+T +NAM+S F + A +
Sbjct: 88 PTRAPSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSV 147
Query: 166 FEQM-----PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV------MITG 214
F + R + S+TA++ + + + S + V +I
Sbjct: 148 FHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIAL 207
Query: 215 YVK---NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
Y+K E +AR++ MPD D + T M+ G+ + G + AR +FE + K V
Sbjct: 208 YMKCDTPEASWDARKVLDEMPDKDDLTW--TTMVVGYVRRGDVNAARSVFEEVDGKFDVV 265
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+NAMI+GY Q+G+ +A LF M+ + D+ T SV +AC+ G+ H +I
Sbjct: 266 WNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQII 325
Query: 332 R--NGF--EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
R F EA + V NA++T+YS+ G I+ ++ F ++ ++VSWNTI++ + G +
Sbjct: 326 RLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLD 385
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
KA+ F M + ++++ ++S H G +++ LF M + + P Y
Sbjct: 386 KAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSEDALKLFNQM-RAEDVKPCDYTYAGA 440
Query: 448 VDILSRAGQLEKAWQITQGM---PFEADTGVWGSLL 480
+ G L+ Q+ + FEA +LL
Sbjct: 441 IAACGELGALKHGRQLHAHLVQCGFEASNSAGNALL 476
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 115/227 (50%), Gaps = 16/227 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
VNNA ++ S+ GKI A+++FD M KDV++WN I++GY +G L ++ +F+ MP KN
Sbjct: 339 VNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKN 398
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMIS-----GFLKHGRLEEA 162
+SW M++G + +DA F M + TY I+ G LKHGR A
Sbjct: 399 DLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHA 458
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
L + + + A+L + K G V+ AR + M + VSW MI+ ++
Sbjct: 459 -HLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGR 517
Query: 223 EARELFYRMP----DYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
EA ELF +M D D+ F+ ++T G+++ FE ++
Sbjct: 518 EALELFDQMVAEGIDPDRISFLT--ILTACNHAGLVDEGFHYFESMK 562
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 313/551 (56%), Gaps = 29/551 (5%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N+ ++ + ++ +AR++FD+MT +DVI+WN+II GY NG ++ ++F M V
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEAT 163
I + + AGC D+ I +A R N ++ + K G L+ A
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+F +M R+V+SYT+M+ G+ ++G +A L + M + + +T + C
Sbjct: 352 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN----CC 407
Query: 224 ARELFYRMPDYDK-------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
AR YR+ D K ++FV A++ + K G ++ A L+F ++ KD +
Sbjct: 408 AR---YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDII 464
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVL 329
S+N +I GY++N A EAL LF+ +++ PD+ T+ V AC++L ++GR+ H
Sbjct: 465 SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY 524
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
++RNG+ ++ V N+++ MY++CG +L + + F I S +LVSW +IA + HG ++A
Sbjct: 525 IMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 584
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
+ F+QM G + D I+F+SLL AC H+G V+E F +M I P+ EHY C+VD
Sbjct: 585 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVD 644
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L+R G L KA++ + MP D +WG+LL C I+ +V+L E A+K+ EL+P+N+
Sbjct: 645 MLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 704
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
YV+++N+YA A W V R+R + ++G+ K SWIEI +V+ F+ GD S+P + I
Sbjct: 705 YVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 764
Query: 570 HLELKRASVQM 580
L++ +M
Sbjct: 765 EAFLRKVRARM 775
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 112/223 (50%), Gaps = 5/223 (2%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ G L+ A +F+ ++ + + +N ++ A++G ++ LF M+ ++ D T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
V + S+L+ ++ G Q H ++++GF SV N+++ Y + + + F ++
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+++SWN+II + +G EK L F QM ++G + D T +S+ + C + ++ +
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 428 FELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMP 468
+ VK S E C L+D+ S+ G L+ A + + M
Sbjct: 319 HSIGVKA---CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV+NA + ++ G + A +F +M KD+I+WN II GY +N + E+ +LF +
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ S + C+ +P A+ +A G HG + +
Sbjct: 492 EKRFSPDERTVACV--------------LPA--CASLSAFDKGREIHGYIMRNGYFSD-- 533
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
R+V + +++D + K G + A L D ++ K++VSWTVMI GY + EA LF
Sbjct: 534 --RHVAN--SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 230 RM 231
+M
Sbjct: 590 QM 591
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N + + ++G E A++L K D+ P TL SV C+ + L +G++ +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDP--RTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
NGF + ++ + + MY+ CG + ++ F ++ + WN ++ A+ G + ++
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 393 FSQMGLNGFDPDGITF 408
F +M +G + D TF
Sbjct: 183 FKKMMSSGVEMDSYTF 198
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 295/527 (55%), Gaps = 45/527 (8%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
AR++ D+M KD +TW ++ GY + G + ++++F+ + K V WN MI+G + +
Sbjct: 222 ARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMC 281
Query: 129 DDAFDYFQAMPERNTA----TYNAMIS-----GFLKHGRLEEATRLFEQ---MPRRNVIS 176
DAF+ F+ M T+ +++S GF HG+ + Q +P +
Sbjct: 282 ADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPV 341
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
A++ + K G++ A+ + D M+ K+VVSW +++GY+ +
Sbjct: 342 NNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDS------------------ 383
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
G L+ A +F+ + K+ +S+ M++GY G++E+AL+LF+ M
Sbjct: 384 ---------------GCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 428
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
D++P D T AC L L GRQ H +++ GFEA+ S NA++TMY++CG +
Sbjct: 429 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVN 488
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ L F + + + VSWN +I+A QHGH +AL F QM G DPD I+FL++L+AC
Sbjct: 489 DARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN 548
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
HAG V+E FE M + +GI P +HY L+D+L R+G++ +A + + MPFE +W
Sbjct: 549 HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIW 608
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
++L+ C N ++E G AA ++ + PQ+ Y++LSN Y+AAG W D RVR LM+++
Sbjct: 609 EAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 668
Query: 537 GVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
GV K+ SWIE+G+K+H FL GD HP +++ L+ +M+ +
Sbjct: 669 GVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKL 715
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 217/490 (44%), Gaps = 42/490 (8%)
Query: 21 LRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKD 80
+R P + H + L+R + ++ S+ RA R L ++ T D
Sbjct: 1 MRPWRPPPTAVASLAHQCSLLLRRLAERHSPAPTCPSSSFLRA-----LRCLHARLLTAD 55
Query: 81 VITWNA-------IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFD 133
++ + +I Y + L LF+S P V+ ++A R+ DA
Sbjct: 56 LLHAPSHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAA 115
Query: 134 YFQAMP--ERNTATYNAMISGFLKHGRLEEATRLFEQM-----PRRNVISYTAMLDGFMK 186
+F A+P R+T +NAM+S F + A +F + R + S+TA++ +
Sbjct: 116 FFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQ 175
Query: 187 KGEVDKARALSDYMSFKNVVSWTV------MITGYVK---NERFCEARELFYRMPDYDKN 237
+ + S + V +I Y+K E +AR++ MPD D
Sbjct: 176 MHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDL 235
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ T M+ G+ + G + AR +FE + K V +NAMI+GY Q+G+ +A LF M+
Sbjct: 236 TW--TTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVS 293
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR--NGF--EANVSVCNAVITMYSRCG 353
+ D+ T SV +AC+ G+ H +IR F EA + V NA++T+YS+ G
Sbjct: 294 EKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGG 353
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I+ ++ F ++ ++VSWNTI++ + G +KA+ F M + ++++ ++S
Sbjct: 354 KIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVS 409
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM---PFE 470
H G +++ LF M + + P Y + G L+ Q+ + FE
Sbjct: 410 GYVHGGLSEDALKLFNQM-RAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFE 468
Query: 471 ADTGVWGSLL 480
A +LL
Sbjct: 469 ASNSAGNALL 478
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 24/281 (8%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
VNNA ++ S+ GKI A+++FD M KDV++WN I++GY +G L ++ +F+ MP KN
Sbjct: 341 VNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKN 400
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMIS-----GFLKHGRLEEA 162
+SW M++G + +DA F M + TY I+ G LKHGR A
Sbjct: 401 DLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHA 460
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
L + + + A+L + K G V+ AR + M + VSW MI+ ++
Sbjct: 461 -HLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGR 519
Query: 223 EARELFYRMP----DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----FN 273
EA ELF +M D D+ F+ ++T G+++ FE ++ +S +
Sbjct: 520 EALELFDQMVAEGIDPDRISFLT--ILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 577
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+I ++G EA L M +P + ++ + C
Sbjct: 578 RLIDLLGRSGRIGEARDLIK---TMPFEPTPSIWEAILSGC 615
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/523 (36%), Positives = 303/523 (57%), Gaps = 19/523 (3%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF---QSMPVK-NIVSWNCMIA 120
+++ ARQLFDQ+ ++ WN++ GY Q+ +E LF + M ++ N ++ ++
Sbjct: 85 RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 144
Query: 121 GC------IDNDRIDDAFDY--FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
C I+ +++ F+ P T + +G G + +A ++F +M R
Sbjct: 145 SCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAG----GTVGDAYKIFCEMFER 200
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
NV+++T+M++G++ ++ AR L D ++VV W +M++GY++ EAR+LF+ MP
Sbjct: 201 NVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMP 260
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+ D V ++ G+ G +E LFE + ++ S+NA+I GYA NG+ E L F
Sbjct: 261 NRD--VMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSF 318
Query: 293 SGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
M+ + D+ P+DATLV+V +AC+ L L+ G+ HV +G + NV V NA++ MY++
Sbjct: 319 KRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAK 378
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG I ++ FR + + +L+SWNT+I A H AL F QM G PDGITF+ +
Sbjct: 379 CGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGI 438
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L AC H G V + F+ M Y I+P EHY C+VD+L+RAG+LE+A + MP EA
Sbjct: 439 LCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEA 498
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
D +W LL AC I NVEL ELA +++ EL+P+N A YVMLSN+Y AG W DV R+++
Sbjct: 499 DGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKV 558
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
M++ G K S IE+ + V F D HP I++I+ L+
Sbjct: 559 AMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLR 601
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 234/514 (45%), Gaps = 63/514 (12%)
Query: 17 FPPILRILSTPDSCGNFTP----HSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQ 71
FP +L+ SCG +C LI+ FV I S G + A +
Sbjct: 139 FPVVLK------SCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYK 192
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA 131
+F +M ++V+ W ++I GY + L ++ LF P +++V WN M++G I+ + +A
Sbjct: 193 IFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEA 252
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG--- 188
F MP R+ +N ++ G+ +G +E LFE+MP RN+ S+ A++ G+ G
Sbjct: 253 RKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFF 312
Query: 189 EVDKA--RALSDYMSFKNVVSWTVMITGYVKNERFCEAR--ELFYRMPDYDKNVFVVTAM 244
EV + R LS+ N + +++ + + ++ NV+V A+
Sbjct: 313 EVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNAL 372
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
+ + K G++ENA +F + KD +S+N +I G A + +AL LF M +PD
Sbjct: 373 MDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDG 432
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
T + + AC +H+ ++ +GF S+ + + M
Sbjct: 433 ITFIGILCAC-----------THMGLVEDGFAYFQSMADDYLIM---------------- 465
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
P + + ++ A+ G E+A+ F +M + + DG+ + LL AC ++ ++
Sbjct: 466 ---PQIEHYGCMVDMLARAGRLEQAMAFVRKMPV---EADGVIWAGLLGAC----RIYKN 515
Query: 425 MDLFELMV-KVYGIIPSSE-HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++L EL + ++ + P + +Y L +I AG+ E ++ M DTG + L
Sbjct: 516 VELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAM---RDTG-FKKLPGC 571
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
+I +N + E + + E PQ +Y +L L
Sbjct: 572 SLIEVNDAVVEFYS--LDERHPQIEEIYGVLRGL 603
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ N ++ ++T + + AR LF++I + +N+M GYAQ+ E + LF
Sbjct: 66 FQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFF 125
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M MD++P+ T V +C + L EG Q H +I+ GF N V +I MYS G
Sbjct: 126 QMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGG 185
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAF 380
+ D+ F ++ N+V+W ++I +
Sbjct: 186 TVGDAYKIFCEMFERNVVAWTSMINGY 212
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 15/226 (6%)
Query: 315 SALQLLNEGRQSHVL---VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
S LQ +Q H + +I NGF+ N + ++T+ + + + F QI PN+
Sbjct: 43 SLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIA 102
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
WN++ +AQ Y + + F QM P+ TF +L +CG + E + +
Sbjct: 103 LWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFL 162
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
+K G + T L+D+ S G + A++I M FE + W S++ +++ ++
Sbjct: 163 IKC-GFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMINGYILSADL-- 218
Query: 492 GELAAKKMRELDPQNSAVY--VMLSNLYAAAGMWRDVTRVRLLMKE 535
++A+++ +L P+ V +M+S Y G D+ R L E
Sbjct: 219 --VSARRLFDLAPERDVVLWNIMVSG-YIEGG---DMVEARKLFHE 258
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 311/539 (57%), Gaps = 21/539 (3%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNCMIA 120
++ +AR+LFD++ +DVI+WN++I+GY NG ++ +LF+ M + ++ + ++A
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVA 259
Query: 121 GCIDNDRI--DDAFDYF--QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
GC + + A + +A + N ++ + K G L A ++FE M R+V+S
Sbjct: 260 GCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVS 319
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMI-----TGYVKNERFCEAREL 227
+T+M+ G+ ++G D + L M + ++ + T ++ TG ++N +
Sbjct: 320 WTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHN--- 376
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
+ + ++FV A++ + K G + +A +F +Q KD VS+N MI GY++N + E
Sbjct: 377 YIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNE 436
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL LF M + + +P+ T+ + AC++L L G++ H ++RNGF + V NA++
Sbjct: 437 ALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVD 495
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY +CG + + L F I +LVSW +IA + HG+ +A+ F++M +G +PD ++
Sbjct: 496 MYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVS 555
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
F+S+L AC H+G ++E F +M I P SEHY C+VD+L+RAG L KA++ + M
Sbjct: 556 FISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMM 615
Query: 468 PFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVT 527
P E D +WG+LL C I +V+L E A+ + EL+P+N+ YV+L+N+YA A W +V
Sbjct: 616 PIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVK 675
Query: 528 RVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDF 586
++R + +G+ K SWIEI KVH F+ GD SHP +KI L LK+ +MK F
Sbjct: 676 KLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHF 734
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 148/319 (46%), Gaps = 52/319 (16%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRN--VISYTAML----------DG---------- 183
YN I F + G L A L Q P+ + + +Y ++L DG
Sbjct: 71 YNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSN 130
Query: 184 ---------------FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
++ G++ + R + D ++ + V W +++ GY K F E+ LF
Sbjct: 131 DVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLF 190
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
RM + + +E+AR LF+ + +D +S+N+MI+GY NG++E+
Sbjct: 191 KRMRELG---------------IRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKG 235
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
L LF M+ + + D AT+VSV CS +L GR H I+ F +++ N ++ M
Sbjct: 236 LDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDM 295
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
YS+ G + + F + ++VSW ++IA +A+ G + ++ F +M G PD T
Sbjct: 296 YSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTI 355
Query: 409 LSLLSACGHAGKVNESMDL 427
++L AC G + D+
Sbjct: 356 TTILHACACTGLLENGKDV 374
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 191/433 (44%), Gaps = 60/433 (13%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
+NN + S++G +++A Q+F+ M + V++W ++I GY + G S LF M +
Sbjct: 288 LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEG 347
Query: 112 I---------VSWNCMIAGCIDNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEE 161
I + C G ++N + D +Y + + + NA++ + K G + +
Sbjct: 348 ISPDIFTITTILHACACTGLLENGK--DVHNYIKENKMQSDLFVSNALMDMYAKCGSMGD 405
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL---SDYMSFKNVVSWTVMITGYVKN 218
A +F +M ++++S+ M+ G+ K ++A L Y S N ++ ++
Sbjct: 406 AHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASL 465
Query: 219 ERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
+E+ + + + V A++ + K G L ARLLF+ I KD VS+ MI
Sbjct: 466 AALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMI 525
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
AGY +G EA+ F+ M ++PD+ + +S+ ACS LL+EG GF
Sbjct: 526 AGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGW---------GF- 575
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
N+ N I P + I+ A+ G+ KA F M
Sbjct: 576 FNMMRNNCCI--------------------EPKSEHYACIVDLLARAGNLSKAYKFIKMM 615
Query: 397 GLNGFDPDGITFLSLLSACG--HAGKVNESM--DLFELMVKVYGIIPSSEHYTCLVDILS 452
+ +PD + +LL C H K+ E + +FEL + G +Y L +I +
Sbjct: 616 PI---EPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTG------YYVLLANIYA 666
Query: 453 RAGQLEKAWQITQ 465
A + E+ ++ +
Sbjct: 667 EAEKWEEVKKLRE 679
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 11/160 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV+NA + ++ G + A +F +M KD+++WN +I GY +N E+ NLF M
Sbjct: 387 LFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQY 446
Query: 110 K---NIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATYNAMISGFLKHGRLE 160
N ++ C++ C ++ + + +R+ A NA++ +LK G L
Sbjct: 447 NSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA--NALVDMYLKCGALG 504
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
A LF+ +P ++++S+T M+ G+ G +A A + M
Sbjct: 505 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM 544
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 63/270 (23%)
Query: 268 DC--VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
DC +N I + + G A+ L + K D++ T SV C+ L+ + +GR+
Sbjct: 65 DCKITDYNIEICRFCELGNLRRAMELINQSPKPDLEL--RTYCSVLQLCADLKSIQDGRR 122
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDS--------------------------- 358
H ++ N E + + + ++ MY CG + +
Sbjct: 123 IHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGN 182
Query: 359 ------------ELAFRQIHSP----------NLVSWNTIIAAFAQHGHYEKALIFFSQM 396
EL R++ S +++SWN++I+ + +G EK L F QM
Sbjct: 183 FRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQM 242
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS-SEHYT---CLVDILS 452
L G + D T +S+++ C + G M L + Y I S + T CL+D+ S
Sbjct: 243 LLLGINTDLATMVSVVAGCSNTG-----MLLLGRALHGYAIKASFGKELTLNNCLLDMYS 297
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++G L A Q+ + M E W S++A
Sbjct: 298 KSGNLNSAIQVFETMG-ERSVVSWTSMIAG 326
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 283/499 (56%), Gaps = 14/499 (2%)
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH 156
+ ++ LF MP +N W +I G + N + A + M E+ +NAMISG+L H
Sbjct: 208 MASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHH 267
Query: 157 GRLEEATRLFEQMPRRNV----ISYTAMLD-----GFMKKGEVDKARALSDYMSFKNVVS 207
G E+A LF +M V +YT+++ GF G+ A L + ++
Sbjct: 268 GLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFL 327
Query: 208 WTV---MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
+V +IT Y K + AR++FY MP K++ +++G+ G +E A+ F ++
Sbjct: 328 LSVGNTLITLYWKYGKVDGARKIFYEMPV--KDIITWNTLLSGYVNAGRMEEAKSFFAQM 385
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
K+ +++ MI+G AQNG E+AL+LF+ M +P+D TACS L L GR
Sbjct: 386 PEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGR 445
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H ++ G ++ +SV NA+ITMY+RCG + + F + + VSWN++IAA QHG
Sbjct: 446 QLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHG 505
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
H KA+ + QM G PD TFL++LSAC HAG V E F M++ YGI P +HY
Sbjct: 506 HGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHY 565
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
++D+ RAG+ A + MPFEA +W +LLA C + N++LG AA+K+ +L P
Sbjct: 566 ARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIP 625
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
Q+ YV+LSN+YA+ G W DV R R LM+++GV K+ A SW E+ NKVH FL D HP
Sbjct: 626 QHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHP 685
Query: 565 CIDKIHLELKRASVQMKSV 583
+ I+ L++ +++MK +
Sbjct: 686 EVLSIYNYLEKLNLEMKKI 704
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 208/469 (44%), Gaps = 90/469 (19%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
AR+LFD++ DVI +IT Y G L+ ++ +F P
Sbjct: 67 ARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETP-------------------- 106
Query: 129 DDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN----------VISYT 178
+ R+T YNAMI+G+ A LF M N V+S +
Sbjct: 107 ---------LDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSAS 157
Query: 179 AMLDGFMKK-GEVDKARALSDYMSFKNVVSWTVMITGYVK---------NERFCEARELF 228
++ ++ G++ F V++ +++ YVK + AR+LF
Sbjct: 158 TLIFYDERQCGQMHGTVVKFGIEIFPAVLN--ALLSVYVKCASSPLVSSSSLMASARKLF 215
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
MP +N F+ T +ITG+ + G L AR + + + + +++NAMI+GY +G+ E+A
Sbjct: 216 DEMP--KRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDA 273
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN----VSVCNA 344
L LF M + +Q D++T SV +AC+ G+Q H +++N + +SV N
Sbjct: 274 LTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNT 333
Query: 345 VITMYSRCGGI-------------------------------LDSELAFRQIHSPNLVSW 373
+IT+Y + G + +++ F Q+ NL++W
Sbjct: 334 LITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTW 393
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+I+ AQ+G E+AL F+QM L+G++P+ F ++AC G + L +V
Sbjct: 394 TVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVH 453
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ G + ++ + +R G +E A + MPF D W S++AA
Sbjct: 454 L-GHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF-VDPVSWNSMIAA 500
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 155/305 (50%), Gaps = 27/305 (8%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N +IT YW+ G + ++ +F MPVK+I++WN +++G ++ R+++A +F MPE+N
Sbjct: 332 NTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLL 391
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
T+ MISG ++G E+A +LF QM LDG+ +DY
Sbjct: 392 TWTVMISGLAQNGFGEQALKLFNQMK----------LDGYEP----------NDYAFAGA 431
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
+ + +V+ G ++N R A+ + +D + V AMIT + + G++E AR +F +
Sbjct: 432 ITACSVL--GALENGRQLHAQIVHL---GHDSTLSVGNAMITMYARCGIVEAARTMFLTM 486
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
D VS+N+MIA Q+G +A+ L+ M+K + PD T ++V +ACS L+ EG
Sbjct: 487 PFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGN 546
Query: 325 QSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQ 382
+ ++ N G +I ++ R G D++ + W ++A
Sbjct: 547 RYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRT 606
Query: 383 HGHYE 387
HG+ +
Sbjct: 607 HGNMD 611
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 145/329 (44%), Gaps = 67/329 (20%)
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER--IQPKD 268
+I Y K+ F AR+LF +P D V T +IT + +G L+ AR +F + +D
Sbjct: 54 LIDIYWKSSDFVYARKLFDEIPQPD--VIARTTLITAYSALGNLKMAREIFNETPLDMRD 111
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR--QS 326
V +NAMI GY+ A+ LF M + QPDD T SV +A S L +E + Q
Sbjct: 112 TVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSA-STLIFYDERQCGQM 170
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRC---------------------------------- 352
H V++ G E +V NA++++Y +C
Sbjct: 171 HGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLI 230
Query: 353 -GGILDSEL-AFRQI-----HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
G + + +L R+I P ++WN +I+ + HG +E AL F +M L G D
Sbjct: 231 TGYVRNGDLTGAREILDTMTEQPG-IAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDE 289
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY----------TCLVDILSRAG 455
T+ S++SAC G F L +V+ I +E L+ + + G
Sbjct: 290 STYTSVISACADGG-------FFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYG 342
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACV 484
+++ A +I MP + D W +LL+ V
Sbjct: 343 KVDGARKIFYEMPVK-DIITWNTLLSGYV 370
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 37/254 (14%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N I+ + GK+ AR++F +M KD+ITWN +++GY G ++E+K+ F MP KN
Sbjct: 330 VGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKN 389
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFE 167
+++W MI+G N + A F M E N + I+ G LE +L
Sbjct: 390 LLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHA 449
Query: 168 QMPRRNVISY----TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
Q+ S AM+ + + G V+ AR + M F + VSW MI ++ +
Sbjct: 450 QIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVK 509
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
A EL+ +M K G+L + R +F +++ + G
Sbjct: 510 AIELYEQM-----------------LKEGILPDRR------------TFLTVLSACSHAG 540
Query: 284 VAEEALRLFSGMIK 297
+ EE R F+ M++
Sbjct: 541 LVEEGNRYFNSMLE 554
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++ L + V NA I+ +R G + AAR +F M D ++WN++I Q+G ++
Sbjct: 451 IVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKA 510
Query: 101 KNLFQSMPVKNIV----SWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
L++ M + I+ ++ +++ C +++ YF +M E Y MI
Sbjct: 511 IELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMID 570
Query: 152 GFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVD 191
F + G+ +A + + MP + A+L G G +D
Sbjct: 571 LFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMD 611
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 313/551 (56%), Gaps = 29/551 (5%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N+ ++ + ++ +AR++FD+MT +DVI+WN+II GY NG ++ ++F M V
Sbjct: 81 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 140
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEAT 163
I + + AGC D+ I +A R N ++ + K G L+ A
Sbjct: 141 IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 200
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+F +M R+V+SYT+M+ G+ ++G +A L + M + + +T + C
Sbjct: 201 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN----CC 256
Query: 224 ARELFYRMPDYDK-------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
AR YR+ D K ++FV A++ + K G ++ A L+F ++ KD +
Sbjct: 257 AR---YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDII 313
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVL 329
S+N +I GY++N A EAL LF+ +++ PD+ T+ V AC++L ++GR+ H
Sbjct: 314 SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY 373
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
++RNG+ ++ V N+++ MY++CG +L + + F I S +LVSW +IA + HG ++A
Sbjct: 374 IMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 433
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
+ F+QM G + D I+F+SLL AC H+G V+E F +M I P+ EHY C+VD
Sbjct: 434 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVD 493
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L+R G L KA++ + MP D +WG+LL C I+ +V+L E A+K+ EL+P+N+
Sbjct: 494 MLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 553
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
YV+++N+YA A W V R+R + ++G+ K SWIEI +V+ F+ GD S+P + I
Sbjct: 554 YVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 613
Query: 570 HLELKRASVQM 580
L++ +M
Sbjct: 614 EAFLRKVRARM 624
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 106/209 (50%), Gaps = 5/209 (2%)
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ ++ + + +N ++ A++G ++ LF M+ ++ D T V + S+L+ +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+ G Q H ++++GF SV N+++ Y + + + F ++ +++SWN+II +
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
+G EK L F QM ++G + D T +S+ + C + ++ + + VK S
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA---CFS 177
Query: 441 SEHYTC--LVDILSRAGQLEKAWQITQGM 467
E C L+D+ S+ G L+ A + + M
Sbjct: 178 REDRFCNTLLDMYSKCGDLDSAKAVFREM 206
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 23/167 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
+FV+NA + ++ G + A +F +M KD+I+WN II GY +N + E+ +LF +
Sbjct: 281 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 340
Query: 108 -----PVKNIVSWNCMIAGCIDNDRIDDAFD---------YFQAMPERNTATYNAMISGF 153
P + V+ C++ C D + YF +R+ A N+++ +
Sbjct: 341 EKRFSPDERTVA--CVLPACASLSAFDKGREIHGYIMRNGYF---SDRHVA--NSLVDMY 393
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
K G L A LF+ + ++++S+T M+ G+ G +A AL + M
Sbjct: 394 AKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 440
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 322/591 (54%), Gaps = 49/591 (8%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+R + + +A + S+ G + A Q+F + ++ +++NA++ GY Q G +E+
Sbjct: 403 LVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEA 462
Query: 101 KNLFQSMP----------------------------------------VKNIVSWNCMIA 120
L+ M KNI+ ++
Sbjct: 463 LELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVH 522
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVIS 176
+ R++ A + F M ERN ++N+MI G+ ++G +EA RLF+QM + + S
Sbjct: 523 MYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFS 582
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY-- 234
++ML + + K R L +++ + ++ V C + + +++ D
Sbjct: 583 LSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTI 642
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
K+V + M++ F G +A+ LF++++ ++ +N+++AGYA G+ +E+ F
Sbjct: 643 KKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLE 702
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC--NAVITMYSRC 352
M++ D++ D T+V++ CS+L L G Q H L+I+ GF N SV A++ MYS+C
Sbjct: 703 MLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGF-VNCSVVLETALVDMYSKC 761
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I + F ++ N+VSWN +I+ +++HG ++ALI + +M G P+ +TFL++L
Sbjct: 762 GAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAIL 821
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SAC H G V E + +F M + Y I +EHYTC+VD+L RAG+LE A + + MP E +
Sbjct: 822 SACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPE 881
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
WG+LL AC ++ ++++G LAA+++ ELDPQN YV++SN+YAAAG W++V +R +
Sbjct: 882 VSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQM 941
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
MK +GV K SWIEI +++ F G +HP ++I+ L+ ++Q K +
Sbjct: 942 MKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGL 992
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 210/444 (47%), Gaps = 46/444 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV A + +R G + A D++ V+TWNA+I GY + +E+ +F M
Sbjct: 210 LFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRM-- 267
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN-----------------TATYNAMISG 152
I C DN A A+ R+ T NA+I
Sbjct: 268 -------LKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDM 320
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL------SDYMSFKNVV 206
+ K E ++F++M RN +++ +++ + G + A L S Y S + +
Sbjct: 321 YAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNL 380
Query: 207 SWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERI 264
+M + + + + REL + + ++ + +A++ + K GM+E A +F +
Sbjct: 381 GSILMASAGLAD--IGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL 438
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEG 323
++ VS+NA++AGY Q G AEEAL L+ M D +QPD T ++ T C+ + N+G
Sbjct: 439 LERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQG 498
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
RQ H +IR N+ V ++ MYS CG + ++ F ++ N SWN++I + Q+
Sbjct: 499 RQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQN 558
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK----VYGIIP 439
G ++AL F QM LNG PD + S+LS+C + +L +V+ GI+
Sbjct: 559 GETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ 618
Query: 440 SSEHYTCLVDILSRAGQLEKAWQI 463
LVD+ ++ G ++ AW++
Sbjct: 619 -----VVLVDMYAKCGSMDYAWKV 637
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 194/398 (48%), Gaps = 37/398 (9%)
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATYNAMISGFLKHGRLEE--- 161
N + ++ +I CID++ M P+ T M+ + + G L++
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILML--YARSGCLDDLCY 127
Query: 162 ATRLFEQMPRRNVISYTAML------DGFMK----KGEVDKARALSDYMSFKNVVSWTVM 211
A +LFE+MP RN+ ++ M+ D +M+ G + + SD +F +V+ +
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIA 187
Query: 212 ITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
+ E R+L + + N+FV A++ G+ + G +++A + I+
Sbjct: 188 M------EDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSV 241
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V++NA+IAGY + EEA +F M+K+ + PD+ T S C AL+ + G+Q H
Sbjct: 242 VTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSK 301
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+I GF+ + V NA+I MY++C F ++ N V+WN+II+A AQ GH+ A
Sbjct: 302 LIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDA 361
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY---GIIPSSEHYTC 446
L+ F +M +G+ + S+L A + + +L +V+ II S
Sbjct: 362 LVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGS----A 417
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
LVD+ S+ G +E+A Q+ + + E + + +LLA V
Sbjct: 418 LVDMYSKCGMVEEAHQVFRSL-LERNEVSYNALLAGYV 454
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 209/465 (44%), Gaps = 63/465 (13%)
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQE---SKNLFQSMPVKNIVSWNCMIAGCIDNDR 127
Q+ D I+ Y ++G L + ++ LF+ MP +N+ +WN MI + R
Sbjct: 96 QMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMI---LAYAR 152
Query: 128 IDDAFDYFQAMPERNTA-------TYNAMISGFLKHGRLEEATRLFEQMPRR----NVIS 176
+DD + + + T+ ++I + + +L + + N+
Sbjct: 153 VDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFV 212
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----- 231
A++DG+ + G +D A D + +VV+W +I GYVK + EA +F RM
Sbjct: 213 GGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGV 272
Query: 232 -PD-------------------------------YDKNVFVVTAMITGFCKVGMLENARL 259
PD + + FV A+I + K E+
Sbjct: 273 CPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLK 332
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F+ + ++ V++N++I+ AQ G +AL LF M + + + L S+ A + L
Sbjct: 333 VFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLAD 392
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
+ +GR+ H ++RN +++ + +A++ MYS+CG + ++ FR + N VS+N ++A
Sbjct: 393 IGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAG 452
Query: 380 FAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK---VY 435
+ Q G E+AL + M +G PD TF +LL+ C + N+ + +++
Sbjct: 453 YVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITK 512
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
II +E LV + S G+L A +I M E + W S++
Sbjct: 513 NIIVETE----LVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMI 552
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 195/524 (37%), Positives = 298/524 (56%), Gaps = 21/524 (4%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCM------ 118
+++ ARQLFDQ+ ++ WN++ GY Q+ +E LF M +I NC
Sbjct: 148 RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRP-NCFTFPVVL 206
Query: 119 -----IAGCIDNDRIDDAFDY--FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
I I+ +++ F+ P T + +G G + +A ++F +M
Sbjct: 207 KSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAG----GTVGDAYKIFCEMFE 262
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
RNV+++T+M++G++ ++ AR L D ++VV W +M++GY++ EAR+LF M
Sbjct: 263 RNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEM 322
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P+ D V ++ G+ G +E LFE + ++ S+NA+I GYA NG+ E L
Sbjct: 323 PNRD--VMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGS 380
Query: 292 FSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
F M+ + D+ P+DATLV+V +AC+ L L+ G+ HV +G + NV V NA++ MY+
Sbjct: 381 FKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYA 440
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG I ++ FR + + +L+SWNT+I A H AL F QM G PDGITF+
Sbjct: 441 KCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIG 500
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+L AC H G V + F+ M Y I+P EHY C+VD+L+RAG+LE+A + MP E
Sbjct: 501 ILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVE 560
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
AD +W LL AC I NVEL ELA +++ EL+P+N A YVMLSN+Y AG W DV R++
Sbjct: 561 ADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLK 620
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
+ M++ G K S IE+ + V F D HP I++I+ L+
Sbjct: 621 VAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLR 664
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 220/475 (46%), Gaps = 52/475 (10%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV I S G + A ++F +M ++V+ W ++I GY + L ++ LF P +
Sbjct: 235 FVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPER 294
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
++V WN M++G I+ + +A F MP R+ +N ++ G+ +G +E LFE+MP
Sbjct: 295 DVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMP 354
Query: 171 RRNVISYTAMLDGFMKKG---EVDKA--RALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
RN+ S+ A++ G+ G EV + R LS+ N + +++ + +
Sbjct: 355 ERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGK 414
Query: 226 --ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
++ NV+V A++ + K G++ENA +F + KD +S+N +I G A +
Sbjct: 415 WVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHS 474
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+AL LF M +PD T + + AC +H+ ++ +GF S+ +
Sbjct: 475 RGADALNLFFQMKNAGQKPDGITFIGILCAC-----------THMGLVEDGFAYFQSMAD 523
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
+ M P + + ++ A+ G E+A F +M + +
Sbjct: 524 DYLIM-------------------PQIEHYGCMVDMLARAGRLEQAXAFVRKMPV---EA 561
Query: 404 DGITFLSLLSACGHAGKVNESMDLFEL-MVKVYGIIPSSE-HYTCLVDILSRAGQLEKAW 461
DG+ + LL AC ++ ++++L EL + ++ + P + +Y L +I AG+ E
Sbjct: 562 DGVIWAGLLGAC----RIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVA 617
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
++ M DTG + L +I +N + E + + E PQ +Y +L L
Sbjct: 618 RLKVAM---RDTG-FKKLPGCSLIEVNDAVVEFYS--LDERHPQIEEIYGVLRGL 666
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 135/300 (45%), Gaps = 31/300 (10%)
Query: 37 SSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
S+ L L + V + N +S G + AR+LF +M +DV+ WN ++ GY NG
Sbjct: 283 SARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGN 342
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
++ + LF+ MP +NI SWN +I G N + F+ M N AT ++S
Sbjct: 343 VEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLS 402
Query: 152 GFLKHGRLE---------EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
+ G L+ E++ L + NV A++D + K G ++ A ++ M
Sbjct: 403 ACARLGALDLGKWVHVYAESSGL-----KGNVYVGNALMDMYAKCGIIENAISVFRGMDT 457
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLL 260
K+++SW +I G + R +A LF++M + + +T ++ +G++E+
Sbjct: 458 KDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAY 517
Query: 261 FER------IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
F+ I P+ + M+ A+ G E+A KM ++ D + AC
Sbjct: 518 FQSMADDYLIMPQ-IEHYGCMVDMLARAGRLEQAXAFVR---KMPVEADGVIWAGLLGAC 573
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ N ++ ++T + + AR LF++I + +N+M GYAQ+ E + LF
Sbjct: 129 FQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFF 188
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M MD++P+ T V +C + L EG Q H +I+ GF N V +I MYS G
Sbjct: 189 QMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGG 248
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAF 380
+ D+ F ++ N+V+W ++I +
Sbjct: 249 TVGDAYKIFCEMFERNVVAWTSMINGY 275
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q +I NGF+ N + ++T+ + + + F QI PN+ WN++ +AQ
Sbjct: 119 QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSE 178
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
Y + + F QM P+ TF +L +CG + E + ++K G +
Sbjct: 179 SYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKC-GFRGNPFVG 237
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
T L+D+ S G + A++I M FE + W S++ +++ ++ ++A+++ +L P
Sbjct: 238 TTLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMINGYILSADL----VSARRLFDLAP 292
Query: 505 QNSAVY--VMLSNLYAAAGMWRDVTRVRLLMKE 535
+ V +M+S Y G D+ R L E
Sbjct: 293 ERDVVLWNIMVSG-YIEGG---DMVEARKLFXE 321
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 191/549 (34%), Positives = 329/549 (59%), Gaps = 22/549 (4%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V+N+ I+ + G + AR LFD+ K V+TWN++I+GY NG E+ +F SM + +
Sbjct: 235 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNH 294
Query: 112 I----VSWNCMIAGCID------NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ S+ +I C + +++ + + + ++N T A++ + K + +
Sbjct: 295 VRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRT--ALMVAYSKCMAMLD 352
Query: 162 ATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGY- 215
A RLF++ NV+S+TAM+ GF++ ++A L M K V +++V++T
Sbjct: 353 ALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP 412
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
V + A+ + +Y+++ V TA++ + K+G ++ A +F I KD V+++AM
Sbjct: 413 VISPSEVHAQVV---KTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAM 469
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL-LNEGRQSHVLVIRNG 334
+AGYAQ G E A+++FS + K ++P++ T S+ C+A + +G+Q H I++
Sbjct: 470 LAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSR 529
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
++++ V +A++TMY++ G I +E F++ +LVSWN++I+ +AQHG KAL F
Sbjct: 530 LDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 589
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M D +TF+ + +AC HAG V E F++MV+ I P+ EH +C+VD+ SRA
Sbjct: 590 EMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 649
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
GQLEKA ++ MP A + +W ++LAAC ++ ELG LAA+K+ + P++SA YV+LS
Sbjct: 650 GQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLS 709
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+YA +G W++ +VR LM E+ V K+ YSWIE+ NK + FL GD SHP D+I+++L+
Sbjct: 710 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLE 769
Query: 575 RASVQMKSV 583
S ++K +
Sbjct: 770 DLSTRLKDL 778
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 198/439 (45%), Gaps = 83/439 (18%)
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF-------------- 166
G + R+ A + F P+R+ +Y +++ GF + GR +EATRLF
Sbjct: 40 GAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSI 99
Query: 167 -------------EQMPRR------------NVISYTAMLDGFMKKGEVDKARALSDYMS 201
E R+ +V T+++D +MK R + D M
Sbjct: 100 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK 159
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPD---------------------------- 233
+NVV+WT +I+GY +N E LF RM D
Sbjct: 160 ERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ 219
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
DK + V ++I + K G + AR+LF++ + K V++N+MI+GYA NG+
Sbjct: 220 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 279
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EAL +F M ++ +++ S+ C+ L+ L Q H V++ GF + ++ A
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTA 339
Query: 345 VITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
++ YS+C +LD+ F++ N+VSW +I+ F Q+ E+A+ FS+M G P
Sbjct: 340 LMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRP 399
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ T+ +L+A V ++ +VK SS T L+D + G++++A ++
Sbjct: 400 NEFTYSVILTAL----PVISPSEVHAQVVKT-NYERSSTVGTALLDAYVKLGKVDEAAKV 454
Query: 464 TQGMPFEADTGVWGSLLAA 482
G+ D W ++LA
Sbjct: 455 FSGID-NKDIVAWSAMLAG 472
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 216/512 (42%), Gaps = 81/512 (15%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
+F +L++ +T C +C I+ V V + + + R +FD
Sbjct: 99 IFSSVLKVSATL--CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFD 156
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDY 134
+M ++V+TW +I+GY +N +E LF M D+
Sbjct: 157 EMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQ--------------------DEG--- 193
Query: 135 FQAMPERNTATYNAMISGFLKHG----RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
+ N+ T+ A + + G L+ T + + + + ++++ ++K G V
Sbjct: 194 ----TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNV 249
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------------------ 232
KAR L D K+VV+W MI+GY N EA +FY M
Sbjct: 250 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLC 309
Query: 233 ---------------------DYDKNVFVVTAMITGFCK-VGMLENARLLFERIQPKDCV 270
+D+N + TA++ + K + ML+ RL E + V
Sbjct: 310 ANLKELRFTEQLHCSVVKYGFVFDQN--IRTALMVAYSKCMAMLDALRLFKETGFLGNVV 367
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+ AMI+G+ QN EEA+ LFS M + ++P++ T + TA + + H V
Sbjct: 368 SWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHAQV 423
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ +E + +V A++ Y + G + ++ F I + ++V+W+ ++A +AQ G E A+
Sbjct: 424 VKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAI 483
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
FS++ G P+ TF S+L+ C F + S + L+ +
Sbjct: 484 KIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 543
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ G +E A ++ + E D W S+++
Sbjct: 544 YAKKGHIESAEEVFKRQR-EKDLVSWNSMISG 574
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 183/377 (48%), Gaps = 17/377 (4%)
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN------- 204
G RL A LF++ P R+ SYT++L GF + G +A L +++ ++
Sbjct: 40 GAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRL--FLNIQHLGMEMDC 97
Query: 205 -VVSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLF 261
+ S + ++ + +E F R+L + + +V V T+++ + K ++ R +F
Sbjct: 98 SIFSSVLKVSATLCDELF--GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVF 155
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ ++ ++ V++ +I+GYA+N + EE L LF M QP+ T + + +
Sbjct: 156 DEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGG 215
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G Q H +V++NG + + V N++I +Y +CG + + + F + ++V+WN++I+ +A
Sbjct: 216 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 275
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
+G +AL F M LN +F S++ C + ++ + L +VK YG +
Sbjct: 276 ANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVK-YGFVFDQ 334
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE--LGELAAKKM 499
T L+ S+ + A ++ + F + W ++++ + N E +G + K
Sbjct: 335 NIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKR 394
Query: 500 RELDPQNSAVYVMLSNL 516
+ + P V+L+ L
Sbjct: 395 KGVRPNEFTYSVILTAL 411
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 321/615 (52%), Gaps = 79/615 (12%)
Query: 39 NCLI--RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
+CLI F+ N ++A +++G+++ AR++FD+M ++ T NA+++ +
Sbjct: 35 HCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRL 94
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAM 149
+ + + LF SMP ++ VS+N +I G + ++A+ P R T + M
Sbjct: 95 VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154
Query: 150 ISGFL---------------------------------KHGRLEEATRLFEQMPRRNVIS 176
++ L K G + +A R+F++M + V+
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--- 233
Y ++ G ++ ++ A+ L M ++ ++WT M+TG +N EA ++F RM
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274
Query: 234 ----------------------------------YDKNVFVVTAMITGFCKVGMLENARL 259
Y+ NVFV +A++ + K + A
Sbjct: 275 GIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F R+ ++ +S+ AMI GY QN +EEA+R FS M ++PDD TL SV ++C+ L
Sbjct: 335 VFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLAS 394
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L EG Q H L + +G ++V NA++T+Y +CG I D+ F ++ + VSW ++
Sbjct: 395 LEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTG 454
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+AQ G ++ + F +M NG PDG+TF+ +LSAC AG V + D F+ M K +GI+P
Sbjct: 455 YAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVP 514
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HYTC++D+ SR+G+ ++A + + MP D W +LL++C + N+E+G+ AA+ +
Sbjct: 515 IDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENL 574
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
E DPQN A YV+L +++AA G W +V +R M+++ V K+ SWI+ NKVH F
Sbjct: 575 LETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSAD 634
Query: 560 DMSHPCIDKIHLELK 574
D SHP +I+ +L+
Sbjct: 635 DQSHPFSSRIYEKLE 649
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 192/407 (47%), Gaps = 62/407 (15%)
Query: 36 HSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQN 94
HS +C ++RL Y FV + + ++ G I AR++F +M K V+ +N +ITG +
Sbjct: 166 HSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC 225
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMI 150
++++K LFQ M ++ ++W M+ G N +A D F+ M T+ +++
Sbjct: 226 KMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSIL 285
Query: 151 SGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
+ LEE ++ + R NV +A++D + K + A A+ M+ +N++
Sbjct: 286 TACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNII 345
Query: 207 SWTVMITGYVKNERFCEARELFYRM------PD--------------------------- 233
SWT MI GY +N EA F M PD
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLA 405
Query: 234 ----YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+ + V A++T + K G +E+A LF+ + D VS+ A++ GYAQ G A+E +
Sbjct: 406 LVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETI 465
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-------RQSHVLV-IRNGFEANVSV 341
LF M+ ++PD T + V +ACS L+ +G ++ H +V I + +
Sbjct: 466 DLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHY------ 519
Query: 342 CNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYE 387
+I +YSR G ++E +Q+ HSP+ W T++++ G+ E
Sbjct: 520 -TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 321/615 (52%), Gaps = 79/615 (12%)
Query: 39 NCLI--RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
+CLI F+ N ++A +++G+++ AR++FD+M ++ T NA+++ +
Sbjct: 35 HCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRL 94
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAM 149
+ + + LF SMP ++ VS+N +I G + ++A+ P R T + M
Sbjct: 95 VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154
Query: 150 ISGFL---------------------------------KHGRLEEATRLFEQMPRRNVIS 176
++ L K G + +A R+F++M + V+
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--- 233
Y ++ G ++ ++ A+ L M ++ ++WT M+TG +N EA ++F RM
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274
Query: 234 ----------------------------------YDKNVFVVTAMITGFCKVGMLENARL 259
Y+ NVFV +A++ + K + A
Sbjct: 275 GIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F R+ ++ +S+ AMI GY QN +EEA+R FS M ++PDD TL SV ++C+ L
Sbjct: 335 VFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLAS 394
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L EG Q H L + +G ++V NA++T+Y +CG I D+ F ++ + VSW ++
Sbjct: 395 LEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTG 454
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+AQ G ++ + F +M NG PDG+TF+ +LSAC AG V + D F+ M K +GI+P
Sbjct: 455 YAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVP 514
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HYTC++D+ SR+G+ ++A + + MP D W +LL++C + N+E+G+ AA+ +
Sbjct: 515 IDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENL 574
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
E DPQN A YV+L +++AA G W +V +R M+++ V K+ SWI+ NKVH F
Sbjct: 575 LETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSAD 634
Query: 560 DMSHPCIDKIHLELK 574
D SHP +I+ +L+
Sbjct: 635 DQSHPFSSRIYEKLE 649
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 192/407 (47%), Gaps = 62/407 (15%)
Query: 36 HSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQN 94
HS +C ++RL Y FV + + ++ G I AR++F +M K V+ +N +ITG +
Sbjct: 166 HSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC 225
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMI 150
++++K LFQ M ++ ++W M+ G N +A D F+ M T+ +++
Sbjct: 226 KMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSIL 285
Query: 151 SGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
+ LEE ++ + R NV +A++D + K + A A+ M+ +N++
Sbjct: 286 TACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNII 345
Query: 207 SWTVMITGYVKNERFCEARELFYRM------PD--------------------------- 233
SWT MI GY +N EA F M PD
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLA 405
Query: 234 ----YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+ + V A++T + K G +E+A LF+ + D VS+ A++ GYAQ G A+E +
Sbjct: 406 LVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETI 465
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-------RQSHVLV-IRNGFEANVSV 341
LF M+ ++PD T + V +ACS L+ +G ++ H +V I + +
Sbjct: 466 DLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHY------ 519
Query: 342 CNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYE 387
+I +YSR G ++E +Q+ HSP+ W T++++ G+ E
Sbjct: 520 -TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 195/546 (35%), Positives = 311/546 (56%), Gaps = 47/546 (8%)
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ---- 136
V N+++ Y + G ++E++ +F M +++VSWN ++AG + N R +A F
Sbjct: 192 VFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRS 251
Query: 137 AMPERNTATYNAMIS--GFLKHGRLEEATRLFEQMPRRNVISY----TAMLDGFMKKGEV 190
++ +TY+ +I+ LKH L A +L + + SY TA++D + K G++
Sbjct: 252 SITMLTESTYSTVINLCANLKH--LGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQL 309
Query: 191 DKARALSDYMS-FKNVVSWTVMITGYVKNERFCEARELFYRM------------------ 231
DKA + MS +NVVSWT MI G ++N A LF RM
Sbjct: 310 DKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTV 369
Query: 232 ---------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
+Y+ V TA++ + K+ E A +F+ I KD VS++AM+
Sbjct: 370 SEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAML 429
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC-SALQLLNEGRQSHVLVIRNGF 335
YAQ G A F M ++P++ T+ S AC S ++ GRQ H + I++
Sbjct: 430 TCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRC 489
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ V +A+++MY+R G I +++ F + +L+SWN++++ +AQHG+ +KAL F Q
Sbjct: 490 HDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQ 549
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M + G D DG+TFLS++ C HAG V E F+LMV+ YGI P+ +HY C+VD+ SRAG
Sbjct: 550 MEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAG 609
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L++ + +GMPF A +W +LL AC ++ NVELG+LAA+K+ L+P +SA YV+LSN
Sbjct: 610 KLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSN 669
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+Y+AAG W++ VR LM + V K+ SWI+I NKVH+F+ D SHP ++I+ +L+
Sbjct: 670 IYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRA 729
Query: 576 ASVQMK 581
+ ++K
Sbjct: 730 MTAKLK 735
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 38/274 (13%)
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP----- 232
T+++D +M V R + + M +NVV+WT ++TGY++ + LF+RM
Sbjct: 95 TSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVW 154
Query: 233 -------------------DYDKN-------------VFVVTAMITGFCKVGMLENARLL 260
D ++ VFV +++ + K G++E AR++
Sbjct: 155 PNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVV 214
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F R++ +D VS+N ++AG NG EAL+LF ++T +V C+ L+ L
Sbjct: 215 FCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHL 274
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAA 379
RQ H V+++GF + +V A++ Y++ G + + F + S N+VSW +I
Sbjct: 275 GLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDG 334
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
Q+G A FS+M +G P+ +T+ ++L+
Sbjct: 335 CIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT 368
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 192/450 (42%), Gaps = 67/450 (14%)
Query: 82 ITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER 141
+ W++++ G + +F+ M +N+V+W ++ G I + D F M
Sbjct: 102 MNWHSVLDG----------RKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAE 151
Query: 142 ----NTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFMKKGEVDKA 193
N T+++++S G ++ + Q + V ++++ + K G V++A
Sbjct: 152 GVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEA 211
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR----------------------- 230
R + M +++VSW ++ G V N R EA +LF+
Sbjct: 212 RVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANL 271
Query: 231 ---------MPDYDKNVF-----VVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAM 275
K+ F V+TA++ + K G L+ A +F + ++ VS+ AM
Sbjct: 272 KHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAM 331
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I G QNG A LFS M + + P+D T ++ T A + Q H VI+ +
Sbjct: 332 IDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEA----SFPPQIHAQVIKTNY 387
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E +V A++ YS+ ++ F+ I ++VSW+ ++ +AQ G A F +
Sbjct: 388 ECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIK 447
Query: 396 MGLNGFDPDGITFLSLLSACGH-AGKVNESMDLFELMVK--VYGIIPSSEHYTCLVDILS 452
M ++G P+ T S + AC A V+ + +K + + S + LV + +
Sbjct: 448 MTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVS---SALVSMYA 504
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
R G +E A Q + D W S+L+
Sbjct: 505 RKGSIENA-QCVFERQTDRDLLSWNSMLSG 533
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 136/265 (51%), Gaps = 1/265 (0%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
++ V T+++ + + + R +FE + ++ V++ +++ GY Q GV + + LF M
Sbjct: 90 DIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMR 149
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ P+ T SV + ++ +++ G+ H I+ G + V VCN+++ MY++CG +
Sbjct: 150 AEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVE 209
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
++ + F ++ + ++VSWNT++A +G +AL F + T+ ++++ C
Sbjct: 210 EARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCA 269
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
+ + + L ++K +G T L+D ++AGQL+KA + M + W
Sbjct: 270 NLKHLGLARQLHSSVLK-HGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSW 328
Query: 477 GSLLAACVINLNVELGELAAKKMRE 501
+++ C+ N ++ L +MRE
Sbjct: 329 TAMIDGCIQNGDIPLAAALFSRMRE 353
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 190/507 (37%), Positives = 280/507 (55%), Gaps = 22/507 (4%)
Query: 96 FLQESKNLFQSMPVKNIV--SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
+ ++ +F P I SW MIAG + ND + A + + +NAMISG+
Sbjct: 199 LMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGY 258
Query: 154 LKHGRLEEATRLFEQMP----RRNVISYTAMLDGF----MKKGEVDKARALSDYMSFKNV 205
++ G EEA F +M + + +YT+++ K G + R + Y+ + V
Sbjct: 259 VRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYI-LRTV 317
Query: 206 VSWT---------VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
V + +IT Y K +R EAR +F +MP D + A+++G+ +E
Sbjct: 318 VEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRD--IISWNAVLSGYVNAQRIEE 375
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A +F + ++ +++ MI+G AQNG EE L+LF+ M ++P D TACS
Sbjct: 376 ANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSV 435
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L+ G+Q H VIR G ++ +S NA+ITMYSRCG + +E F + + VSWN +
Sbjct: 436 LGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAM 495
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
IAA AQHGH KA+ F QM PD ITFL++L+AC HAG + E F+ M YG
Sbjct: 496 IAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYG 555
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
I P +HY L+D+L RAG KA + + MPFEA +W +LLA C I+ N+ELG AA
Sbjct: 556 ITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAA 615
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
++ EL P Y++LSN+YAA G W +V RVRLLM+E+GV K+ SW+E+ N VH F
Sbjct: 616 DRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVF 675
Query: 557 LGGDMSHPCIDKIHLELKRASVQMKSV 583
L D HP + ++ L++ +MK +
Sbjct: 676 LVDDARHPEVQAVYTYLQQLVNEMKKL 702
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 184/411 (44%), Gaps = 90/411 (21%)
Query: 66 ISAARQLFDQMTTKDVI---TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGC 122
+++AR++FD+ T K+ I +W +I GY +N L ++ L + V+WN MI+G
Sbjct: 200 MASARKVFDE-TPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGY 258
Query: 123 IDNDRIDDAFDYFQAMP----ERNTATY-------------------------------- 146
+ ++AFD F+ M + + TY
Sbjct: 259 VRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVV 318
Query: 147 -----------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
NA+I+ + K+ R+ EA R+F++MP R++IS+ A+L G++ +++A +
Sbjct: 319 EPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANS 378
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP-------DY-------------- 234
+ M +NV++WTVMI+G +N E +LF +M DY
Sbjct: 379 IFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGS 438
Query: 235 ----------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
D + A+IT + + G++E+A +F + D VS+NAMIA
Sbjct: 439 LDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAA 498
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEA 337
AQ+G +A+ LF M+K D+ PD T +++ TAC+ L+ EGR + R G
Sbjct: 499 LAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITP 558
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYE 387
+I + R G L ++ + + W ++A HG+ E
Sbjct: 559 GEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNME 609
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 168/394 (42%), Gaps = 71/394 (18%)
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER--IQPKD 268
+I Y K+ AR+LF ++P D + T +++ + G ++ A+ LF + +D
Sbjct: 46 LINIYCKSSNITYARKLFDKIPKPD--IVARTTLLSAYSSSGNVKLAQQLFNATPLTIRD 103
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
VS+NAMI Y+ AL LF M + PD T SV +A S + +E R +
Sbjct: 104 TVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIA--DEERHCQM 161
Query: 329 L---VIRNGFEANVSVCNAVITMYSRCGG---------------ILDSELAFRQIHSPNL 370
L VI+ G SV NA+++ Y C + D E QI+ P+
Sbjct: 162 LHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFD-ETPKNQIYEPSW 220
Query: 371 ----------------------------VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
V+WN +I+ + + G YE+A F +M G
Sbjct: 221 TTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQ 280
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYG-----IIPSSEHYT-----CLVDILS 452
D T+ SL+SAC G NE M +F +V+G ++ S H+ L+ +
Sbjct: 281 EDEYTYTSLISAC---GSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYT 337
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
+ ++ +A ++ MP D W ++L+ V N + E A E+ +N + +
Sbjct: 338 KYDRMIEARRVFDKMPVR-DIISWNAVLSGYV---NAQRIEEANSIFSEMPERNVLTWTV 393
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
+ + A G + ++ MK +G+ + C Y++
Sbjct: 394 MISGLAQNGFGEEGLKLFNQMKSEGL-EPCDYAF 426
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 109/221 (49%), Gaps = 10/221 (4%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
VNNA I+ ++ ++ AR++FD+M +D+I+WNA+++GY ++E+ ++F MP +N
Sbjct: 328 VNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERN 387
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH----GRLEEATRLFE 167
+++W MI+G N ++ F M + +G + G L+ ++
Sbjct: 388 VLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHS 447
Query: 168 QMPR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
Q+ R + + A++ + + G V+ A ++ M + + VSW MI ++ +
Sbjct: 448 QVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVK 507
Query: 224 ARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFE 262
A ELF +M D + ++T G+++ R F+
Sbjct: 508 AIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFD 548
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IRL + NA I+ SR G + +A +F M D ++WNA+I Q+G ++
Sbjct: 449 VIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKA 508
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMIS 151
LF+ M ++I +++ ++ C I + YF M R T Y +I
Sbjct: 509 IELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLID 568
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ G +A + + MP
Sbjct: 569 LLCRAGMFLKAQSVIKSMP 587
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 189/527 (35%), Positives = 296/527 (56%), Gaps = 19/527 (3%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAGCID 124
A ++FDQ+ + WNA+ GY QN ++ LF+ M + N ++ ++ C+
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVK 63
Query: 125 NDRIDDAFDY--------FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
+ + + + F+A P T + SG G + A R+F +M RNVI+
Sbjct: 64 INALKEGEEVHCFVIKSGFRANPFVATTLIDMYASG----GAIHAAYRVFGEMIERNVIA 119
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+TAM++G++ ++ AR L D +++V W MI+GY++ + ARELF +MP+ K
Sbjct: 120 WTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPN--K 177
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM- 295
+V ++ G+ G + LFE + ++ S+NA+I GY +NG E L F M
Sbjct: 178 DVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRML 237
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ + P+DATLV+V +AC+ L L+ G+ HV +G++ NV V NA++ MY++CG +
Sbjct: 238 VDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVV 297
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F+ + + +L+SWNTII A HGH AL FS M + G +PDGITF+ +L AC
Sbjct: 298 ETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCAC 357
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
H G V + F+ M Y I+P EHY C+VD+L RAG L A + MP EAD +
Sbjct: 358 THMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVI 417
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
W +LL AC + NVEL ELA +K+ E +P+N A YVMLSN+Y G W+DV R+++ M++
Sbjct: 418 WAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRD 477
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
G K S IE+ + + F D HP ++I+ L+ + ++S
Sbjct: 478 TGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRS 524
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 219/475 (46%), Gaps = 52/475 (10%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV I + G I AA ++F +M ++VI W A+I GY L ++ LF P +
Sbjct: 87 FVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMINGYITCCDLVTARRLFDLAPER 146
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+IV WN MI+G I+ + A + F MP ++ ++N +++G+ +G + RLFE+MP
Sbjct: 147 DIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMP 206
Query: 171 RRNVISYTAMLDGFMKKG---EVDKA--RALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
RNV S+ A++ G+ + G EV A R L D N + +++ + +
Sbjct: 207 ERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGK 266
Query: 226 --ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
++ Y NV+V A++ + K G++E A +F+ + KD +S+N +I G A +G
Sbjct: 267 WVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHG 326
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+AL LFS M PD T + + AC +H+ ++ +GF S
Sbjct: 327 HGADALNLFSHMKIAGENPDGITFIGILCAC-----------THMGLVEDGF----SYFK 371
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
++ YS P + + I+ + G A+ F +M + +
Sbjct: 372 SMTDDYSIV---------------PRIEHYGCIVDLLGRAGLLAHAVDFIRKMPI---EA 413
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIPSSE-HYTCLVDILSRAGQLEKAW 461
D + + +LL AC +V ++++L EL + K+ P + +Y L +I G+ +
Sbjct: 414 DAVIWAALLGAC----RVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVA 469
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
++ M DTG + L +I +N L E + + E P+ +Y L L
Sbjct: 470 RLKVAM---RDTG-FKKLPGCSLIEVNDYLVEFYS--LDERHPEKEQIYGTLRTL 518
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ENA +F++I + +NAM GY+QN ++ + LF M +D+ P+ T + +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C + L EG + H VI++GF AN V +I MY+ G I + F ++ N+++W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 374 NTIIAAF 380
+I +
Sbjct: 121 TAMINGY 127
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 13/197 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V NA + ++ G + A +F M KD+I+WN II G +G ++ NLF M +
Sbjct: 281 VYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKI 340
Query: 110 ----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLE 160
+ +++ ++ C ++D F YF++M + + Y ++ + G L
Sbjct: 341 AGENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLA 400
Query: 161 EATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKAR-ALSDYMSF--KNVVSWTVMITGYV 216
A +MP + + + A+L V+ A AL + F KN ++ ++ Y
Sbjct: 401 HAVDFIRKMPIEADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYG 460
Query: 217 KNERFCEARELFYRMPD 233
R+ + L M D
Sbjct: 461 DFGRWKDVARLKVAMRD 477
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 189/541 (34%), Positives = 307/541 (56%), Gaps = 11/541 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
FV I+ SR +I AR+LFD++ + TWNA+ GY QNG +++ LF +
Sbjct: 45 FVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRI 104
Query: 108 -PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEA 162
+ N ++ +I C + + + + + N+ ++I + K G +E+A
Sbjct: 105 AGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDA 164
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
++F +M RNV+ +TA+++G++ G+V R L D ++VV W+V+I+GY++++
Sbjct: 165 YKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMA 224
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
ARELF +MP+ D + AM+ G+ G +E +F+ + ++ S+N +I GY +N
Sbjct: 225 AARELFDKMPNRDTMSW--NAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKN 282
Query: 283 GVAEEALRLFSGM-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
G+ E L F M ++ + P+D TLV+V +ACS L L+ G+ HV G++ N+ V
Sbjct: 283 GLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFV 342
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
N +I MY++CG I ++ + F + +++SWNTII A HGH AL F +M G
Sbjct: 343 GNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGE 402
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
+PDG+TF+ +LSAC H G V + F+ MV Y I+P EHY C+VD+L RAG L++A
Sbjct: 403 EPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQAL 462
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
+ MP E D +W +LL AC + NVE+ ELA +++ EL+P N A +VM+SN+Y G
Sbjct: 463 NFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLG 522
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
DV R+++ M++ G K S IE + V F D H + I+ LK ++ ++
Sbjct: 523 RSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLR 582
Query: 582 S 582
S
Sbjct: 583 S 583
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 213/474 (44%), Gaps = 79/474 (16%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V A I+ G + + R+LFD +DV+ W+ +I+GY ++ + ++ LF MP
Sbjct: 176 VVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPN 235
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
++ +SWN M+ G N ++ F MPERN ++N +I G++K+G E F++M
Sbjct: 236 RDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRM 295
Query: 170 PRR-----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
N + A+L + G +D + W
Sbjct: 296 LVEGHVIPNDFTLVAVLSACSRLGALDMGK-------------WV--------------- 327
Query: 225 RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
++ Y N+FV +I + K G++ENA ++F + KD +S+N +I G A +G
Sbjct: 328 -HVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGH 386
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
A +AL +F M +PD T V + +AC +H+ ++++GF +
Sbjct: 387 APDALGMFDRMKSEGEEPDGVTFVGILSAC-----------THMGLVKDGF----LYFKS 431
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ YS P + + ++ + G ++AL F +M + +PD
Sbjct: 432 MVDHYSIV---------------PQIEHYGCMVDLLGRAGLLDQALNFIRKMPI---EPD 473
Query: 405 GITFLSLLSACGHAGKVNESMDLFEL-MVKVYGIIPSSE-HYTCLVDILSRAGQLEKAWQ 462
+ + +LL AC ++ +++++ EL + ++ + P++ ++ + +I G+ E +
Sbjct: 474 AVIWAALLGAC----RLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVAR 529
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
+ M DTG + L VI N + E + + E + ++Y +L L
Sbjct: 530 LKIAM---RDTG-FRKLPGCSVIECNDSVVEFYS--LDERHSETESIYRVLKGL 577
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 106/504 (21%), Positives = 192/504 (38%), Gaps = 128/504 (25%)
Query: 86 AIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT 145
++I Y + G ++++ +F M +N+V W +I G I + F PER+
Sbjct: 150 SLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVM 209
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV 205
++ +ISG+++ + A LF++MP R+ +S+ AML+G+ GEV+ + D M +NV
Sbjct: 210 WSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNV 269
Query: 206 VSWTVMITGYVKNERFCEARELFYRM-------PD------------------------- 233
SW +I GYVKN F E E F RM P+
Sbjct: 270 FSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHV 329
Query: 234 ------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK-------------------- 267
Y N+FV +I + K G++ENA ++F + K
Sbjct: 330 YAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPD 389
Query: 268 ---------------DCVSFNAMIAGYAQNGVAEEALRLFSGMI---------------- 296
D V+F +++ G+ ++ F M+
Sbjct: 390 ALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMV 449
Query: 297 -----------------KMDMQPDDATLVSVFTACSALQLLN--EGRQSHVLVIRNGFEA 337
KM ++PD ++ AC + + E ++ + A
Sbjct: 450 DLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNPA 509
Query: 338 NVSVCNAVITMYSRCGGILDSELA-----FRQIHSPNLVSWNTIIAAF--AQHGHYEKAL 390
N + + + R + ++A FR++ +++ N + F H E
Sbjct: 510 NFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETES 569
Query: 391 IFFSQMGL------NGFDPD------GITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
I+ GL +G+ P+ G+ + L H+ + + + E++ V I+
Sbjct: 570 IYRVLKGLTMLLRSHGYVPNLSDVAHGLG-VGLWDPTIHSALLLQYNSVREVIFPVLAIL 628
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQ 462
P T L +++SRA + KAW
Sbjct: 629 PDDHSRTLLEEVVSRAQGVWKAWN 652
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ N FV IT + + +AR LF++I + ++NAM GY QNG + + LF
Sbjct: 41 EHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGE 100
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ ++ P+ T + +C L+ + EG + H ++GF++N V ++I MYS+ G
Sbjct: 101 LNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGC 160
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAF 380
+ D+ F ++H N+V W II +
Sbjct: 161 VEDAYKVFGEMHERNVVVWTAIINGY 186
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
+ +++ +C + L+ Q ++ +G E N V IT SR I + F
Sbjct: 12 EEKFITLLRSCKNYERLH---QIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFD 68
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+I PN +WN + + Q+GH+ ++ F ++ P+ TF ++ +CG V E
Sbjct: 69 KIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVRE 128
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
++ K +G +S T L+D+ S+ G +E A+++ M E + VW +++
Sbjct: 129 GEEVHCCATK-HGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEM-HERNVVVWTAIINGY 186
Query: 484 VINLNVELGELAAKKMRELDPQNSAV 509
++ +V ++ +++ +L P+ V
Sbjct: 187 ILCGDV----VSGRRLFDLAPERDVV 208
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 207/595 (34%), Positives = 320/595 (53%), Gaps = 74/595 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG---------FLQE- 99
F NA +SA +R G+ AR LF+ + D ++NA++ ++G FL
Sbjct: 83 TFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAM 142
Query: 100 ---------------------SKNLFQSMPVKNIVSWNC-------------MIAGCIDN 125
K+L V +V+ + M A C
Sbjct: 143 HADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKC--- 199
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRRNVIS--- 176
+R DA F AMPERN ++N++I+ + ++G + EA LF +M P +S
Sbjct: 200 ERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVM 259
Query: 177 -----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
A +G + K L D M N ++ Y K R EAR +F M
Sbjct: 260 SACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNA-----LVDMYAKCGRTWEARCIFDSM 314
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P ++V T+++ G+ K +E+A+++F ++ K+ +++N +IA YAQNG EEA+RL
Sbjct: 315 PS--RSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRL 372
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF------EANVSVCNAV 345
F + + + P T +V AC + +L G+Q+HV V++ GF E++V V N++
Sbjct: 373 FVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSL 432
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY + G I D F ++ + + VSWN +I +AQ+G + AL F +M + +PD
Sbjct: 433 VDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDS 492
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
+T + +LSACGH+G V+E F M + +GI PS +HYTC+VD+L RAG L++A ++ +
Sbjct: 493 VTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIK 552
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
MP E D+ +W SLL AC ++ NVELGE A ++ ELDP+NS YV+LSN+YA G W D
Sbjct: 553 DMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWAD 612
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
V RVR MK++GV+KQ SWIEIG+K++ FL D HPC ++IH L+ ++M
Sbjct: 613 VFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 667
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 8/332 (2%)
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+++ Y + R EAR +F +P +N F A+++ + ++G + AR LFE I D
Sbjct: 56 NTLVSTYARLGRLREARRVFDGIPL--RNTFSYNALLSAYARLGRPDEARALFEAIPDPD 113
Query: 269 CVSFNAMIAGYAQNGV--AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
S+NA++A A++G A +ALR + M D + + S +AC+A + L G Q
Sbjct: 114 QCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQV 173
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H LV R+ +V + A++ MY++C +D+ F + N+VSWN++I + Q+G
Sbjct: 174 HGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPV 233
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
+AL+ F +M GF PD +T S++SAC E + MVK +
Sbjct: 234 GEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNA 293
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
LVD+ ++ G+ +A I MP + S+LA + NVE ++ +M E +N
Sbjct: 294 LVDMYAKCGRTWEARCIFDSMPSRSVVS-ETSILAGYAKSANVEDAQVVFSQMVE---KN 349
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
+ +L YA G + R+ + +K +
Sbjct: 350 VIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI 381
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/489 (35%), Positives = 275/489 (56%), Gaps = 37/489 (7%)
Query: 130 DAFDYFQAMPERNTATY----------------------------------NAMISGFLK 155
DA F AMP R++ TY NA+I + K
Sbjct: 116 DALAAFSAMPRRDSFTYSFLIKALSAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSK 175
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
+G +A ++F++MP R+V+S+ + +++GE+ R L D M K+ VSW ++ GY
Sbjct: 176 NGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGY 235
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
K A ELF RMP+ +NV + M++G+CK G LE AR++F+++ K+ V++ M
Sbjct: 236 TKAGEVEAAFELFQRMPE--RNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIM 293
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
++ AQ G+ +EA +LF+ M + ++ D A +VS+ AC+ L+ G++ H V +
Sbjct: 294 VSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNL 353
Query: 336 EANVSVCNAVITMYSRCGGILDSELAF-RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ VCNA+I M+ +CG + ++ F + + VSWN+II FA HGH +KAL F+
Sbjct: 354 GRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFA 413
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
QM GF+PD +T +++LSAC H G V+E F M + YGI+P EHY C++D+L R
Sbjct: 414 QMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRG 473
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G +++A + + MP+E + +WGSLL+AC ++ NVE E+A ++ +L P N+ Y +LS
Sbjct: 474 GLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLS 533
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+YA AG W D+ + R+ MK G K SW+E+ H F GD H D+I +
Sbjct: 534 NIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVD 593
Query: 575 RASVQMKSV 583
R S +K V
Sbjct: 594 RLSSHVKHV 602
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 206/383 (53%), Gaps = 13/383 (3%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L S + FV NA I A S+ G S AR++FD+M +DV++WN + + G L
Sbjct: 154 VVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGV 213
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ LF MP K+ VSWN ++ G ++ AF+ FQ MPERN +++ M+SG+ K G LE
Sbjct: 214 RKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLE 273
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYV 216
A +F++MP +N++++T M+ +KG VD+A L M +V + ++
Sbjct: 274 MARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACA 333
Query: 217 KNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF--ERIQPKDCVSF 272
++ + + + R + ++ V A+I FCK G + A +F E +Q KD VS+
Sbjct: 334 ESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQ-KDSVSW 392
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N++I G+A +G ++AL LF+ M + PD T+++V +AC+ + ++EGR+ + R
Sbjct: 393 NSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMER 452
Query: 333 N-GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+ G + +I + R G I ++ +L PN V W ++++A H + E A
Sbjct: 453 DYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAE 512
Query: 391 IFFSQMGLNGFDPDGITFLSLLS 413
I ++ L+ P ++LS
Sbjct: 513 IAVNE--LSKLQPSNAGNYAVLS 533
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
G +AL FS M + D T + A SA + R H V++ G + V
Sbjct: 111 GGAPRDALAAFSAMPRRD----SFTYSFLIKALSAAGVAPV-RAVHSHVVKLGSVEDTFV 165
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
NA+I YS+ GG D+ F ++ ++VSWNT +AA + G F +M
Sbjct: 166 GNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMP---- 221
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
+ D +++ ++L AG+V + +LF+ M + + ++ +V + G LE A
Sbjct: 222 EKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVV-----SWSTMVSGYCKKGDLEMAR 276
Query: 462 QITQGMPFEADTGVWGSLLAACV-INLNVELGELAAKKMRE 501
I MP + + W +++AC L E G+L A +M+E
Sbjct: 277 VIFDKMPSK-NLVTWTIMVSACAQKGLVDEAGKLFA-QMKE 315
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 310/546 (56%), Gaps = 9/546 (1%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T +V + + A ++ ++ A LF ++ KDV++WN+II G G + ++ LF
Sbjct: 83 TPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDE 142
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEATR 164
MP + +VSW ++ G + + +A F AM +R+ A +NAMI G+ +GR+++A +
Sbjct: 143 MPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWNAMIHGYCSNGRVDDALQ 202
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARAL-SDYMSFKNVVSWTVMITGYVKNERFCE 223
LF QMP R+VIS+++M+ G G+ ++A L D ++ +S V++ G +
Sbjct: 203 LFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPA 262
Query: 224 ARE------LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
R +++ D+ + FV +++T + +E A +F + K V + A++
Sbjct: 263 WRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLT 322
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GY N EAL +F M+++D+ P++++ S +C L+ + G+ H ++ G E+
Sbjct: 323 GYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLES 382
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
V +++ MYS+CG + D+ F+ I+ N+VSWN++I AQHG AL F+QM
Sbjct: 383 GGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQML 442
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
G DPDGIT LLSAC H+G + ++ F + + + EHYT +VD+L R G+L
Sbjct: 443 REGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGEL 502
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
E+A + MP +A++ VW +LL+AC + N++L + AA ++ E++P SA YV+LSNLY
Sbjct: 503 EEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNLY 562
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
A++ W +V +R MK GV K+ SW+ + + H FL D SHP +KI+ +L+
Sbjct: 563 ASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLG 622
Query: 578 VQMKSV 583
V++K +
Sbjct: 623 VKLKEL 628
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 183/364 (50%), Gaps = 7/364 (1%)
Query: 123 IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
++N +D+A F +P + + Y M+ + ++ RL EA LF ++P ++V+S+ +++
Sbjct: 66 LNNRSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIK 125
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
G + G++ AR L D M + VVSWT ++ G ++ EA LF+ M D++V
Sbjct: 126 GCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWN 185
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
AMI G+C G +++A LF ++ +D +S+++MIAG NG +E+AL LF M+ +
Sbjct: 186 AMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCL 245
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNG---FEANVSVCNAVITMYSRCGGILDSE 359
LV +A + + G Q H V + G F+ VS +++T Y+ C + +
Sbjct: 246 SSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSA--SLVTFYAGCKQMEAAC 303
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F ++ ++V W ++ + + + +AL F +M P+ +F S L++C
Sbjct: 304 RVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLE 363
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ + VK+ G+ LV + S+ G + A + +G+ E + W S+
Sbjct: 364 DIERGKVIHAAAVKM-GLESGGYVGGSLVVMYSKCGYVSDAVYVFKGIN-EKNVVSWNSV 421
Query: 480 LAAC 483
+ C
Sbjct: 422 IVGC 425
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 204/653 (31%), Positives = 321/653 (49%), Gaps = 123/653 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV--KN 111
N I S++ K++ AR LFD++ D++ +I Y G L+ S+ +F P+ ++
Sbjct: 52 NRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRD 111
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERN----------------------------- 142
V +N MI N A + F M N
Sbjct: 112 SVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLH 171
Query: 143 -----------TATYNAMISGFLK---------HGRLEEATRLFEQMPRRNVISYTAMLD 182
T+ NA+IS ++K + EA +LF++MP R+ +S+T ++
Sbjct: 172 CAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIIT 231
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----------- 231
G++K ++D A+ + S K V+W MI+GY + EA E+F +M
Sbjct: 232 GYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFT 291
Query: 232 ------------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLF 261
P D + V A+IT + K G ++ A+ +F
Sbjct: 292 FTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIF 351
Query: 262 ERIQPKDCVSFNAMIAGY-------------------------------AQNGVAEEALR 290
++ +D VS+N +++GY AQ G AEEAL+
Sbjct: 352 NKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALK 411
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
F+ M +P D +CS L L GRQ H V+R G+E+++S NA+ITMY+
Sbjct: 412 FFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYA 471
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
RCG + + F + + +SWN +IAA QHG +A+ F +M G PD I+FL+
Sbjct: 472 RCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLT 531
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
++SAC HAG V E F+ M VYG+ P EHY ++D+L RAG+ +A ++ + MPFE
Sbjct: 532 VISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFE 591
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
+W +LLA C I+ N++LG AA+++ EL PQ+ YV+LSN+YA AG W D+ +VR
Sbjct: 592 PGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVR 651
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
LM+++GV K+ SWIE+ NKVH FL GD +HP + +I+ L++ ++M+ +
Sbjct: 652 KLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKI 704
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 48/267 (17%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
VNNA I+ + GK+ A+++F++M +D+++WN I++GY + E+K+ F MP KN
Sbjct: 330 VNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKN 389
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS----GFLKHGRLEEA 162
I+SW MI+G ++A +F M + + A A+IS G LKHGR
Sbjct: 390 ILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGR---- 445
Query: 163 TRLFEQMPR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
+L Q+ R ++ + A++ + + G VD A L M + +SW MI ++
Sbjct: 446 -QLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQH 504
Query: 219 ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+ +A ELF M L E I P D +SF +I+
Sbjct: 505 GQGTQAIELFEEM----------------------------LKEGILP-DRISFLTVISA 535
Query: 279 YAQNGVAEEALRLFSGMIKM-DMQPDD 304
+ G+ +E + F M + + PD+
Sbjct: 536 CSHAGLVKEGRKYFDSMHNVYGVNPDE 562
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
R H +I +GF+ + N +I +YS+ + + F +I P++V+ T+IAA++
Sbjct: 32 ARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSA 91
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G + + FS L D + + ++++A H + +++LF M + P +
Sbjct: 92 AGDLKLSRKIFSDTPLGM--RDSVFYNAMITAYSHNHDGHAAIELFCDMQRD-NFRPDNY 148
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+T ++ L+ + EK Q ++ TG S+L A +
Sbjct: 149 TFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALI 190
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 322/574 (56%), Gaps = 47/574 (8%)
Query: 57 ISALSRAGKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
I+AL+ G ++ Q+ + + + N++I+ ++G L++++ +F +M K+
Sbjct: 210 IAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDS 269
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH-GRLEEA--TRLFEQM 169
VSWN MIAG + N + +AF+ F M +A + +K L+E R+
Sbjct: 270 VSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCK 329
Query: 170 PRRNVIS-----YTAMLDGFMKKGEVDKARALSDYM-SFKNVVSWTVMITGYVKNERFCE 223
++ +S TA++ K E+D A +L M ++VVSWT MI+GY++N +
Sbjct: 330 TLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQ 389
Query: 224 ARELFYRM---------------------------------PDYDKNVFVVTAMITGFCK 250
A LF M +Y+K+ V TA++ F K
Sbjct: 390 AVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVK 449
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+G + +A +FE I+ KD ++++AM+AGYAQ G EEA ++F + + ++P++ T S+
Sbjct: 450 IGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSI 509
Query: 311 FTACSA-LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
AC+A + +G+Q H I+ + V ++++T+Y++ G I + F++ +
Sbjct: 510 INACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERD 569
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
LVSWN++I+ +AQHG +KAL F +M + D ITF+ ++SAC HAG V + + F
Sbjct: 570 LVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFN 629
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
+M+ + I P+ EHY+C++D+ SRAG L KA I GMPF VW +LAA ++ N+
Sbjct: 630 IMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNI 689
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
ELG+LAA+K+ L+PQ+SA YV+LSN+YAAAG W + VR LM ++ V K+ YSWIE+
Sbjct: 690 ELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEV 749
Query: 550 GNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
NK + FL GD+SHP D I+ +L + +++ V
Sbjct: 750 KNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDV 783
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 229/486 (47%), Gaps = 47/486 (9%)
Query: 19 PILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTT 78
PILRI C +N L++ +V NA+ L R A+QLFDQ
Sbjct: 17 PILRIRRYQLHC------HANPLLQ----SHVVALNAR--TLLRDSDPRFAQQLFDQTPL 64
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCID--NDRIDDAF 132
+D+ N ++ Y + QE+ +LF S+ + + +C+++ C N + +
Sbjct: 65 RDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQV 124
Query: 133 DYFQAMP---ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
+ Q + + + N+++ + K G + + R+F++M R+V+S+ ++L G+
Sbjct: 125 -HCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRF 183
Query: 190 VDKARAL----------SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
D+ L DY + V++ + G V A L ++ ++
Sbjct: 184 NDQVWELFCLMQVEGYRPDYYTVSTVIA-ALANQGAVAIGMQIHA--LVVKL-GFETERL 239
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V ++I+ K GML +AR++F+ ++ KD VS+N+MIAG+ NG EA F+ M
Sbjct: 240 VCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAG 299
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+P AT SV +C++L+ L R H +++G N +V A++ ++C I D+
Sbjct: 300 AKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAF 359
Query: 360 LAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F +H ++VSW +I+ + Q+G ++A+ FS M G P+ T+ ++L+
Sbjct: 360 SLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT----- 414
Query: 419 GKVNESMDLFELMVKVY--GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
V ++ + E+ +V SS T L+D + G + A ++ + + + D W
Sbjct: 415 --VQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETK-DVIAW 471
Query: 477 GSLLAA 482
++LA
Sbjct: 472 SAMLAG 477
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDV----ITWNAIITGYWQNGF 96
+ L T+ V +A ++ ++AG+ A ++F Q+T + + T+ +II
Sbjct: 459 VFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTA 518
Query: 97 LQESKNLFQSMPVK-NIVSWNCMIAGCI----DNDRIDDAFDYFQAMPERNTATYNAMIS 151
E F + +K + + C+ + + I+ A + F+ ER+ ++N+MIS
Sbjct: 519 SVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMIS 578
Query: 152 GFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKAR-----ALSDYMSF 202
G+ +HG+ ++A +FE+M +RN+ I++ ++ G V K + ++D+
Sbjct: 579 GYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHIN 638
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMP 232
+ ++ MI Y + +A ++ MP
Sbjct: 639 PTMEHYSCMIDLYSRAGMLGKAMDIINGMP 668
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 321/615 (52%), Gaps = 79/615 (12%)
Query: 39 NCLI--RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
+CLI F+ N ++A +++G+++ AR++FD+M ++ T NA+++ +
Sbjct: 35 HCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRL 94
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAM 149
+ + + LF SMP ++ VS+N +I G + ++A+ P R T + M
Sbjct: 95 VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154
Query: 150 ISGFL---------------------------------KHGRLEEATRLFEQMPRRNVIS 176
++ L K G + +A R+F++M + V+
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--- 233
Y ++ G ++ ++ A+ L M ++ ++WT M+TG +N EA ++F RM
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274
Query: 234 ----------------------------------YDKNVFVVTAMITGFCKVGMLENARL 259
Y+ NVFV +A++ + K + A
Sbjct: 275 GIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F R+ ++ +S+ AMI GY QN +EEA+R FS M ++PDD TL SV ++C+ L
Sbjct: 335 VFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLAS 394
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L EG Q H L + +G ++V NA++T+Y +CG I D+ F ++ + VSW ++
Sbjct: 395 LEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTG 454
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+AQ G ++ + F +M +NG PDG+TF+ +LSAC AG V + D F+ M K + I+P
Sbjct: 455 YAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVP 514
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HYTC++D+ SR+G+ ++A + + MP D W +LL++C + N+E+G+ AA+ +
Sbjct: 515 IDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENL 574
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
E DPQN A YV+L +++AA G W +V +R M+++ V K+ SWI+ NKVH F
Sbjct: 575 LETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSAD 634
Query: 560 DMSHPCIDKIHLELK 574
D SHP +I+ +L+
Sbjct: 635 DQSHPFSSRIYEKLE 649
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 191/407 (46%), Gaps = 62/407 (15%)
Query: 36 HSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQN 94
HS +C ++RL Y FV + + ++ G I AR++F +M K V+ +N +ITG +
Sbjct: 166 HSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC 225
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMI 150
++++K LFQ M ++ ++W M+ G N +A D F+ M T+ +++
Sbjct: 226 KMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSIL 285
Query: 151 SGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
+ EE ++ + R NV +A++D + K + A A+ M+ +N++
Sbjct: 286 TACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNII 345
Query: 207 SWTVMITGYVKNERFCEARELFYRM------PD--------------------------- 233
SWT MI GY +N EA F M PD
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLA 405
Query: 234 ----YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+ + V A++T + K G +E+A LF+ + D VS+ A++ GYAQ G A+E +
Sbjct: 406 LVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETI 465
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-------RQSHVLV-IRNGFEANVSV 341
LF M+ ++PD T + V +ACS L+ +G ++ H +V I + +
Sbjct: 466 DLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHY------ 519
Query: 342 CNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYE 387
+I +YSR G ++E +Q+ HSP+ W T++++ G+ E
Sbjct: 520 -TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/546 (35%), Positives = 309/546 (56%), Gaps = 22/546 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V N I+ + G + AR+LFD+ D ++WN+I+ GY + G ++E+K +F MP
Sbjct: 176 VYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQ 235
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+NIV+ N MI ++ +A+ F M E++ +++A+ISG+ ++G EEA +F +M
Sbjct: 236 RNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEM 295
Query: 170 PRR----------NVISYTAMLD----GFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
+V+S A L G M G V + + Y++ +N +I Y
Sbjct: 296 NANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRM-GIESYVNLQNA-----LIHMY 349
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ +A++LF + D+ + +MI+G K G +E AR LF+ + KD VS++A+
Sbjct: 350 SGSGEIMDAQKLFNGSHNLDQISW--NSMISGCMKCGSVEKARALFDVMPEKDIVSWSAV 407
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+GYAQ+ E L LF M ++PD+ LVSV +AC+ L L++G+ H + +NG
Sbjct: 408 ISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGL 467
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ NV + ++ MY +CG + ++ F + + SWN +I A +G E++L FS+
Sbjct: 468 KVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSE 527
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M NG P+ ITF+ +L AC H G V+E F M++ +GI P+ +HY C+VD+L RAG
Sbjct: 528 MKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAG 587
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
L +A ++ + MP D WG+LL AC + + E+GE +K+ EL P + +V+LSN
Sbjct: 588 LLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSN 647
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
++A+ G W DV VR +MK+QGV K S IE VH FL GD +HP I+K+ L
Sbjct: 648 IFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNE 707
Query: 576 ASVQMK 581
+ ++K
Sbjct: 708 MAKRLK 713
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 30/295 (10%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR+ YV + NA I S +G+I A++LF+ D I+WN++I+G + G ++++
Sbjct: 330 VIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKA 389
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATYNAMISGFL 154
+ LF MP K+IVSW+ +I+G +D + F M P+ ++IS
Sbjct: 390 RALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILV--SVISACT 447
Query: 155 KHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
L++ + + + NVI T +LD +MK G V+ A + + M K V SW
Sbjct: 448 HLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNA 507
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT-----GFCK-VGMLENARLLFERI 264
+I G N + ++F M KN V+ IT G C+ +G+++ R F +
Sbjct: 508 LIIGLAVNGLVERSLDMFSEM----KNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASM 563
Query: 265 QPKDCVSFNA-----MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
K + N M+ + G+ EA +L M M PD AT ++ AC
Sbjct: 564 IEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIE---SMPMAPDVATWGALLGAC 615
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 156/351 (44%), Gaps = 47/351 (13%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV--SWTVMITGYV 216
L+ + ++F+++ N + M+ +++ +KA L M NV ++T +
Sbjct: 91 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150
Query: 217 KNERFCE--ARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
R E +E+ + +D +V+V +I + G + +AR LF+ D VS+
Sbjct: 151 CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 210
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N+++AGY + G EEA +F D P
Sbjct: 211 NSILAGYVKKGDVEEAKLIF------DQMP------------------------------ 234
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+ N+ N++I + + G ++++ F ++ ++VSW+ +I+ + Q+G YE+AL+
Sbjct: 235 ---QRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVM 291
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M NG D + +S+LSAC H V + L++++ GI L+ + S
Sbjct: 292 FIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRM-GIESYVNLQNALIHMYS 350
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
+G++ A ++ G D W S+++ C+ +VE M E D
Sbjct: 351 GSGEIMDAQKLFNG-SHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKD 400
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 299/562 (53%), Gaps = 58/562 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ A++ Y + L ++ ++F +MP +++V+WN M+AG + A + +M
Sbjct: 159 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 218
Query: 140 ER------NTATYNAMISGFLKHGRLEEATRLFEQ------MPRRN--------VISYTA 179
+ N +T A++ + G L + T + P RN V+ TA
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 278
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------- 231
+LD + K G + AR + D M +N V+W+ +I G+V R +A LF M
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 232 ------------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLF 261
++ ++++ + K G+++ A LF
Sbjct: 339 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 398
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ + KD VS++A+++GY QNG AEEA +F M +++PD AT+VS+ ACS L L
Sbjct: 399 DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQ 458
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
GR SH VI G + S+CNA+I MY++CG I S F + S ++VSWNT+IA +
Sbjct: 459 HGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG 518
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
HG ++A F +M GF PDG+TF+ LLSAC H+G V E F +M YG+ P
Sbjct: 519 IHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRM 578
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
EHY C+VD+LSR G L++A++ Q MP AD VW +LL AC + N++LG+ ++ ++E
Sbjct: 579 EHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQE 638
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
L P+ + +V+LSN+Y+AAG + + VR++ K QG K SWIEI +H F+GGD
Sbjct: 639 LGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQ 698
Query: 562 SHPCIDKIHLELKRASVQMKSV 583
SHP +I+ EL V +K +
Sbjct: 699 SHPQSPEIYRELDNILVGIKKL 720
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 21/336 (6%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T V + A + ++ G + AR++FD M ++ +TW+A+I G+ + ++ LF++
Sbjct: 270 TDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKA 329
Query: 107 MPVKNI-----VSWNCMIAGC--IDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHG 157
M + + S + C +D+ R+ + A + N+++S + K G
Sbjct: 330 MLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAG 389
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
+++A LF++M ++ +SY+A++ G+++ G ++A + M NV + +
Sbjct: 390 LIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 449
Query: 218 --------NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
C + R + A+I + K G ++ +R +F + +D
Sbjct: 450 ACSHLAALQHGRCSHGSVIIR--GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI 507
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHV 328
VS+N MIAGY +G+ +EA LF M + PD T + + +ACS L+ EG+ HV
Sbjct: 508 VSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHV 567
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
+ G + ++ + SR GG LD F Q
Sbjct: 568 MGHGYGLTPRMEHYICMVDLLSR-GGFLDEAYEFIQ 602
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 16/248 (6%)
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNG--VAEEALRLFSGMIKMDMQPDDATLVS 309
G L A LF++I D ++N +I Y+ + A + L L+ M++ + P++ T
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
ACSAL + GR H I G +A++ V A++ MY +C + D+ F + + +
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 370 LVSWNTIIAAFAQHGHYEKAL--IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
LV+WN ++A +A HG Y A+ + QM ++ P+ T ++LL G + + +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 428 FELMVKVYGIIPSSEHY----------TCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
++ + P+ T L+D+ ++ G L A ++ MP + W
Sbjct: 251 HAYCIRAC-LHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV-TWS 308
Query: 478 SLLAACVI 485
+L+ V+
Sbjct: 309 ALIGGFVL 316
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP--- 108
+ NA I ++ G+I +RQ+F+ M ++D+++WN +I GY +G +E+ LF M
Sbjct: 478 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 537
Query: 109 -VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
+ V++ C+++ C + + + +F M T Y M+ + G L+EA
Sbjct: 538 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 597
Query: 163 TRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALS---DYMSFKNVVSWTVMITGYVKN 218
+ MP R +V + A+L +D + +S + + ++ ++ Y
Sbjct: 598 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 657
Query: 219 ERFCEAREL 227
RF EA E+
Sbjct: 658 GRFDEAAEV 666
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 299/562 (53%), Gaps = 58/562 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ A++ Y + L ++ ++F +MP +++V+WN M+AG + A + +M
Sbjct: 44 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 103
Query: 140 ER------NTATYNAMISGFLKHGRLEEATRLFEQ------MPRRN--------VISYTA 179
+ N +T A++ + G L + T + P RN V+ TA
Sbjct: 104 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 163
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------- 231
+LD + K G + AR + D M +N V+W+ +I G+V R +A LF M
Sbjct: 164 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 223
Query: 232 ------------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLF 261
++ ++++ + K G+++ A LF
Sbjct: 224 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 283
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ + KD VS++A+++GY QNG AEEA +F M +++PD AT+VS+ ACS L L
Sbjct: 284 DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQ 343
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
GR SH VI G + S+CNA+I MY++CG I S F + S ++VSWNT+IA +
Sbjct: 344 HGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG 403
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
HG ++A F +M GF PDG+TF+ LLSAC H+G V E F +M YG+ P
Sbjct: 404 IHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRM 463
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
EHY C+VD+LSR G L++A++ Q MP AD VW +LL AC + N++LG+ ++ ++E
Sbjct: 464 EHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQE 523
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
L P+ + +V+LSN+Y+AAG + + VR++ K QG K SWIEI +H F+GGD
Sbjct: 524 LGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQ 583
Query: 562 SHPCIDKIHLELKRASVQMKSV 583
SHP +I+ EL V +K +
Sbjct: 584 SHPQSPEIYRELDNILVGIKKL 605
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 21/336 (6%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T V + A + ++ G + AR++FD M ++ +TW+A+I G+ + ++ LF++
Sbjct: 155 TDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKA 214
Query: 107 MPVKNI-----VSWNCMIAGC--IDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHG 157
M + + S + C +D+ R+ + A + N+++S + K G
Sbjct: 215 MLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAG 274
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
+++A LF++M ++ +SY+A++ G+++ G ++A + M NV + +
Sbjct: 275 LIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 334
Query: 218 --------NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
C + R + A+I + K G ++ +R +F + +D
Sbjct: 335 ACSHLAALQHGRCSHGSVIIR--GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI 392
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHV 328
VS+N MIAGY +G+ +EA LF M + PD T + + +ACS L+ EG+ HV
Sbjct: 393 VSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHV 452
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
+ G + ++ + SR GG LD F Q
Sbjct: 453 MGHGYGLTPRMEHYICMVDLLSR-GGFLDEAYEFIQ 487
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M++ + P++ T ACSAL + GR H I G +A++ V A++ MY +C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL--IFFSQMGLNGFDPDGITFLSLL 412
+ D+ F + + +LV+WN ++A +A HG Y A+ + QM ++ P+ T ++LL
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHY----------TCLVDILSRAGQLEKAWQ 462
G + + + ++ + P+ T L+D+ ++ G L A +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRAC-LHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 463 ITQGMPFEADTGVWGSLLAACVI 485
+ MP + W +L+ V+
Sbjct: 180 VFDAMPARNEV-TWSALIGGFVL 201
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP--- 108
+ NA I ++ G+I +RQ+F+ M ++D+++WN +I GY +G +E+ LF M
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422
Query: 109 -VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
+ V++ C+++ C + + + +F M T Y M+ + G L+EA
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 482
Query: 163 TRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALS---DYMSFKNVVSWTVMITGYVKN 218
+ MP R +V + A+L +D + +S + + ++ ++ Y
Sbjct: 483 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 542
Query: 219 ERFCEAREL 227
RF EA E+
Sbjct: 543 GRFDEAAEV 551
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 266/444 (59%), Gaps = 3/444 (0%)
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
+T NA+I + K+G +A ++F++MP R+V+S+ + +++GE+ R L D M
Sbjct: 38 EDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEM 97
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
K+ VSW ++ GY K A ELF RMP+ +NV + M++G+CK G LE AR++
Sbjct: 98 PEKDTVSWNTILDGYTKAGEVEAAFELFQRMPE--RNVVSWSTMVSGYCKKGDLEMARVI 155
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+++ K+ V++ M++ AQ G+ +EA +LF+ M + ++ D A +VS+ AC+ L
Sbjct: 156 FDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSL 215
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF-RQIHSPNLVSWNTIIAA 379
+ G++ H V + + VCNA+I M+ +CG + ++ F + + VSWN+II
Sbjct: 216 SLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGG 275
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
FA HGH +KAL F+QM GF+PD +T +++LSAC H G V+E F M + YGI+P
Sbjct: 276 FAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMP 335
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
EHY C++D+L R G +++A + + MP+E + +WGSLL+AC ++ NVE E+A ++
Sbjct: 336 QIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNEL 395
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
+L P N+ Y +LSN+YA AG W D+ + R+ MK G K SW+E+ H F G
Sbjct: 396 SKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVG 455
Query: 560 DMSHPCIDKIHLELKRASVQMKSV 583
D H D+I + R S +K V
Sbjct: 456 DRKHQDSDQISEMVDRLSSHVKHV 479
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 206/383 (53%), Gaps = 13/383 (3%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L S + FV NA I A S+ G S AR++FD+M +DV++WN + + G L
Sbjct: 31 VVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGV 90
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ LF MP K+ VSWN ++ G ++ AF+ FQ MPERN +++ M+SG+ K G LE
Sbjct: 91 RKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLE 150
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYV 216
A +F++MP +N++++T M+ +KG VD+A L M +V + ++
Sbjct: 151 MARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACA 210
Query: 217 KNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF--ERIQPKDCVSF 272
++ + + + R + ++ V A+I FCK G + A +F E +Q KD VS+
Sbjct: 211 ESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQ-KDSVSW 269
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N++I G+A +G ++AL LF+ M + PD T+++V +AC+ + ++EGR+ + R
Sbjct: 270 NSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMER 329
Query: 333 N-GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+ G + +I + R G I ++ +L PN V W ++++A H + E A
Sbjct: 330 DYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAE 389
Query: 391 IFFSQMGLNGFDPDGITFLSLLS 413
I ++ L+ P ++LS
Sbjct: 390 IAVNE--LSKLQPSNAGNYAVLS 410
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
R H V++ G + V NA+I YS+ GG D+ F ++ ++VSWNT +AA +
Sbjct: 25 RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVRE 84
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G F +M + D +++ ++L AG+V + +LF+ M + +
Sbjct: 85 GELAGVRKLFDEMP----EKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVV-----S 135
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV-INLNVELGELAAKKMRE 501
++ +V + G LE A I MP + + W +++AC L E G+L A +M+E
Sbjct: 136 WSTMVSGYCKKGDLEMARVIFDKMPSK-NLVTWTIMVSACAQKGLVDEAGKLFA-QMKE 192
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 299/562 (53%), Gaps = 58/562 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ A++ Y + L ++ ++F +MP +++V+WN M+AG + A + +M
Sbjct: 44 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 103
Query: 140 ER------NTATYNAMISGFLKHGRLEEATRLFEQM------PRRN--------VISYTA 179
+ N +T A++ + G L + T + P RN V+ TA
Sbjct: 104 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 163
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------- 231
+LD + K G + AR + D M +N V+W+ +I G+V R +A LF M
Sbjct: 164 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 223
Query: 232 ------------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLF 261
++ ++++ + K G+++ A LF
Sbjct: 224 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 283
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ + KD VS++A+++GY QNG AEEA +F M +++PD AT+VS+ ACS L L
Sbjct: 284 DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQ 343
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
GR SH VI G + S+CNA+I MY++CG I S F + S ++VSWNT+IA +
Sbjct: 344 HGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG 403
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
HG ++A F +M GF PDG+TF+ LLSAC H+G V E F +M YG+ P
Sbjct: 404 IHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRM 463
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
EHY C+VD+LSR G L++A++ Q MP AD VW +LL AC + N++LG+ ++ ++E
Sbjct: 464 EHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQE 523
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
L P+ + +V+LSN+Y+AAG + + VR++ K QG K SWIEI +H F+GGD
Sbjct: 524 LGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQ 583
Query: 562 SHPCIDKIHLELKRASVQMKSV 583
SHP +I+ EL V +K +
Sbjct: 584 SHPQSPEIYRELDNILVGIKKL 605
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 21/336 (6%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T V + A + ++ G + AR++FD M ++ +TW+A+I G+ + ++ LF++
Sbjct: 155 TDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKA 214
Query: 107 MPVKNI-----VSWNCMIAGC--IDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHG 157
M + + S + C +D+ R+ + A + N+++S + K G
Sbjct: 215 MLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAG 274
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
+++A LF++M ++ +SY+A++ G+++ G ++A + M NV + +
Sbjct: 275 LIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 334
Query: 218 --------NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
C + R + A+I + K G ++ +R +F + +D
Sbjct: 335 ACSHLAALQHGRCSHGSVIIR--GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI 392
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHV 328
VS+N MIAGY +G+ +EA LF M + PD T + + +ACS L+ EG+ HV
Sbjct: 393 VSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHV 452
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
+ G + ++ + SR GG LD F Q
Sbjct: 453 MGHGYGLTPRMEHYICMVDLLSR-GGFLDEAYEFIQ 487
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M++ + P++ T ACSAL + GR H I G +A++ V A++ MY +C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL--IFFSQMGLNGFDPDGITFLSLL 412
+ D+ F + + +LV+WN ++A +A HG Y A+ + QM ++ P+ T ++LL
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHY----------TCLVDILSRAGQLEKAWQ 462
G + + + ++ + P+ T L+D+ ++ G L A +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRAC-LHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 463 ITQGMPFEADTGVWGSLLAACVI 485
+ MP + W +L+ V+
Sbjct: 180 VFDAMPARNEV-TWSALIGGFVL 201
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP--- 108
+ NA I ++ G+I +RQ+F+ M ++D+++WN +I GY +G +E+ LF M
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422
Query: 109 -VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
+ V++ C+++ C + + + +F M T Y M+ + G L+EA
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 482
Query: 163 TRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALS---DYMSFKNVVSWTVMITGYVKN 218
+ MP R +V + A+L +D + +S + + ++ ++ Y
Sbjct: 483 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 542
Query: 219 ERFCEAREL 227
RF EA E+
Sbjct: 543 GRFDEAAEV 551
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 198/567 (34%), Positives = 305/567 (53%), Gaps = 44/567 (7%)
Query: 57 ISALSRAGKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
I+ RAG+ A L+ + K D + N +++GY + G E+ +F+ M VK +VS
Sbjct: 151 ITGFVRAGRFDEAECLYAETPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVS 210
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR--- 171
++ M+ G RI DA F MPERN T+ AMI G+ K G E+ LF +M +
Sbjct: 211 YSSMVDGYCKMGRILDARSLFDRMPERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 172 ---------------RNVISY----------------------TAMLDGFMKKGEVDKAR 194
R+ Y +++ + K G + +A+
Sbjct: 271 VRVNSNTLAVMFRACRDFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAK 330
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
A+ M +K+ VSW +ITG V+ E+ EA ELF +MP K++ T MI GF G +
Sbjct: 331 AVFGVMKYKDSVSWNSLITGLVQREQISEAYELFEKMPG--KDMVSWTDMIKGFSGKGEI 388
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
LF + KD +++ AMI+ + NG EEAL F M++ + P+ T SV +A
Sbjct: 389 SKCVELFGMMPEKDDITWTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSAT 448
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
++L L EG Q H V++ ++SV N++++MY +CG D+ F I PN+VS+N
Sbjct: 449 ASLADLIEGLQIHGRVVKMNMANDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYN 508
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+I+ F+ +G ++A+ FS + G +P+G+TFL+LLSAC H G V+ F+ M
Sbjct: 509 TMISGFSYNGFGKEAVKLFSMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFS 568
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
YGI P +HY C+VD+ R+G L++A+ + MP E +GVWGSLL+A +L V+L EL
Sbjct: 569 YGIEPGPDHYACMVDLFGRSGLLDEAYNLISTMPCEPHSGVWGSLLSASKTHLRVDLAEL 628
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
AAKK+ EL+P ++ YV+LS LY+ G D R+ + K + + K SWI + +VH
Sbjct: 629 AAKKLIELEPDSATPYVVLSQLYSMVGKNSDCDRIMNIKKSKRIKKDPGSSWIILKGQVH 688
Query: 555 YFLGGDMSHPCIDKIHLELKRASVQMK 581
FL GD SH +++I L +M+
Sbjct: 689 NFLAGDESHLNLEEIAFTLDMIGNEME 715
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 215/416 (51%), Gaps = 48/416 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N++IS L+R G + A +F QM+ + +++WNA+I+ Y +NG + ++ +F MPV
Sbjct: 50 IFQCNSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPV 109
Query: 110 KNIVSWNCMIAGCIDND-RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
+ S+N MI I N + A++ F +PE+N +Y MI+GF++ GR +EA L+ +
Sbjct: 110 RATTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAECLYAE 169
Query: 169 MPR--RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
P R+ ++ +L G+++ G+ ++A + + M+ K VVS++ M+ GY K R +AR
Sbjct: 170 TPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARS 229
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
LF RMP ++NV TAMI G+ K G E+ LF R++ Q G
Sbjct: 230 LFDRMP--ERNVITWTAMIDGYFKAGFFEDGFGLFLRMR---------------QEG--- 269
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
D++ + TL +F AC EG Q H L+ R E ++ + N++I
Sbjct: 270 ------------DVRVNSNTLAVMFRACRDFFRYREGSQIHGLLSRMPLEFDLFLGNSLI 317
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
+MYS+ G + +++ F + + VSWN++I Q +A F +M D +
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKYKDSVSWNSLITGLVQREQISEAYELFEKMP----GKDMV 373
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH--YTCLVDILSRAGQLEKA 460
++ ++ G++++ ++LF G++P + +T ++ G E+A
Sbjct: 374 SWTDMIKGFSGKGEISKCVELF-------GMMPEKDDITWTAMISAFVSNGYYEEA 422
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 179/371 (48%), Gaps = 39/371 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N+ IS S+ G + A+ +F M KD ++WN++ITG Q + E+ LF+ MP
Sbjct: 310 LFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNSLITGLVQREQISEAYELFEKMPG 369
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K++VSW MI G I + F MPE++ T+ AMIS F+ +G EEA F +M
Sbjct: 370 KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDITWTAMISAFVSNGYYEEALCWFHKM 429
Query: 170 PRRNVI--SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
R+ V SYT F +V+S T + ++ + R +
Sbjct: 430 LRKQVCPNSYT-----------------------FSSVLSATASLADLIEGLQI-HGRVV 465
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
M + ++ V ++++ +CK G +A +F I + VS+N MI+G++ NG +E
Sbjct: 466 KMNMAN---DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGFSYNGFGKE 522
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVI 346
A++LFS + +P+ T +++ +AC + ++ G + + G E ++
Sbjct: 523 AVKLFSMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDHYACMV 582
Query: 347 TMYSRCGGILDSELAFRQIHS----PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
++ R G+LD A+ I + P+ W ++++A H + A + + L +
Sbjct: 583 DLFGR-SGLLDE--AYNLISTMPCEPHSGVWGSLLSASKTHLRVDLAEL--AAKKLIELE 637
Query: 403 PDGITFLSLLS 413
PD T +LS
Sbjct: 638 PDSATPYVVLS 648
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 314/534 (58%), Gaps = 9/534 (1%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV---KNIV 113
++ +R ++ A LF +M D +T +++ GY NG L E++ LF + ++
Sbjct: 143 VAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGDRDAT 202
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+ N MIA N R+D A F + RN A+++ ++ + ++G L+ A + F++MP+R+
Sbjct: 203 ACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRD 262
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
I++TAM +GE+ AR + Y+S +V++W ++ GY + E R LF M
Sbjct: 263 SIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEH 322
Query: 234 YDKNVFVVTA-MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
VV ++ + K G +++AR + + + + VS+ AMIA YAQNG A EA+ LF
Sbjct: 323 RTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLF 382
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSR 351
M +P D TL+SV +C+ L L+ G++ H + + F ++ + NAVITMY +
Sbjct: 383 QCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGK 442
Query: 352 CGGILDSELAFRQI--HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITF 408
CG + + F + + ++V+W +I A+AQ+G E+A+ F +M ++G +P+ +TF
Sbjct: 443 CGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTF 502
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT-QGM 467
LS+LSAC H G++ ++ + F M +G+ P+ +HY CLVD+L RAG+L +A ++ +
Sbjct: 503 LSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHK 562
Query: 468 PFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVT 527
FEAD W + L+AC +N ++E + AAK++ EL+P+N A V+LSN+YAA G DV
Sbjct: 563 DFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVA 622
Query: 528 RVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
R+R MK GV K SWIEI N+VH F+ D+SHP +I+ EL+R ++K
Sbjct: 623 RIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIK 676
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 188/409 (45%), Gaps = 53/409 (12%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA I+A + ++ A LF Q+ ++ +W+ ++ Y QNG L +K F MP ++ +
Sbjct: 205 NAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSI 264
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
++ M A D + A + + + + +NA++ G+ + G L+E RLF M R
Sbjct: 265 AFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRT 324
Query: 174 VISYT---AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
V + +++ + K G VD AR + D M + VSWT MI Y +N EA LF
Sbjct: 325 VATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQC 384
Query: 231 M--------------------------------------PDYDKNVFVVTAMITGFCKVG 252
M P + +++ ++ A+IT + K G
Sbjct: 385 MDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCG 444
Query: 253 MLENARLLFERI--QPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVS 309
LE AR +FE + + + V++ AMI YAQNGV EEA+ LF M I +P+ T +S
Sbjct: 445 NLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLS 504
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGF---EANVSVCNAVITMYSRCGGILDSE--LAFRQ 364
V +ACS L L + + H + F A C ++ + R G + ++E L +
Sbjct: 505 VLSACSHLGQLEQAWE-HFCSMGPDFGVPPAGDHYC-CLVDLLGRAGRLGEAEKLLLRHK 562
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
++V W ++A +G E++ + ++ +P+ + LLS
Sbjct: 563 DFEADVVCWIAFLSACQMNGDLERSQRAAKR--VSELEPENVAGRVLLS 609
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 158/369 (42%), Gaps = 50/369 (13%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
N N +I F K G + A +F ++ N S++ ++ ++ + ARAL D M
Sbjct: 41 NRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSWSCIIQAYVSSSRIHDARALFDSMP 100
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
+ +W +MI Y + R +ARELF+ M ++V ++ G+ + LE A LF
Sbjct: 101 GFDAFTWNIMIAAYARINRLDDARELFHGMIS-GRDVVSWAILVAGYARHDRLEEASALF 159
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
R+ D V+ +++ GYA NG EA LF
Sbjct: 160 RRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDR--------------------------- 192
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
I + + + CNA+I Y + + +E F QI N SW+ ++ +A
Sbjct: 193 ---------IGGAGDRDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYA 243
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
Q+GH + A F +M D I F ++ + G++ + ++ + V I
Sbjct: 244 QNGHLDLAKKSFDRMP----QRDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIA--- 296
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL-AAKKMR 500
+ L++ SR G L++ ++ M V +++A ++NL + G + A+++
Sbjct: 297 --WNALLEGYSRTGDLDEVRRLFSAMEHRT---VATTVVAGTLVNLYGKCGRVDDARRVL 351
Query: 501 ELDPQNSAV 509
+ P ++V
Sbjct: 352 DAMPVRTSV 360
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 17/234 (7%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITW---NAIITGYWQNGFL 97
++R S V NA + SR G + R+LF M + V T ++ Y + G +
Sbjct: 285 MLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATTVVAGTLVNLYGKCGRV 344
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISGF 153
+++ + +MPV+ VSW MIA N +A + FQ M E + T +++
Sbjct: 345 DDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSC 404
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAML-----DGFMKKGEVDKARALSDYMSF--KNVV 206
G L R+ ++ + S + ML + K G ++ AR + + + ++VV
Sbjct: 405 AVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVV 464
Query: 207 SWTVMITGYVKNERFCEARELFYRM---PDYDKNVFVVTAMITGFCKVGMLENA 257
+WT MI Y +N EA ELF M + N ++++ +G LE A
Sbjct: 465 TWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQA 518
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
AC+ + L+E + H + R+ N + N +I ++ +CG + F ++ PN S
Sbjct: 16 ACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYS 75
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
W+ II A+ A F M GF D T+ +++A +++++ +LF M+
Sbjct: 76 WSCIIQAYVSSSRIHDARALFDSM--PGF--DAFTWNIMIAAYARINRLDDARELFHGMI 131
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
++ + LV +R +LE+A + + MP W ++ V+ G
Sbjct: 132 SGRDVVS----WAILVAGYARHDRLEEASALFRRMPL------WDTVTCTSVLQGYAHNG 181
Query: 493 ELA 495
LA
Sbjct: 182 HLA 184
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 313/549 (57%), Gaps = 22/549 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG--------FLQESK 101
++V ISA S +++ A +F+Q+ +V +N +I + QN F K
Sbjct: 55 LYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQK 114
Query: 102 N-LFQSMPVKNIVSWNCMIAGCIDNDRID----DAFDYFQAMPERNTATYNAMISGFLKH 156
N LF + C G + ++ + + +F + N++I + K
Sbjct: 115 NGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFG-----DLFVPNSLIDSYSKC 169
Query: 157 GRL--EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
G L A +LF +M ++++S+ +M+ G +K G++ +AR L D M+ ++ VSW ++ G
Sbjct: 170 GLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDG 229
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
YVK +A LF +MP+ +NV + M++G+CK G +E AR+LF+++ K+ V++
Sbjct: 230 YVKAGEMSQAFNLFEKMPE--RNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTI 287
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+I+G+A+ G+A+EA L++ M ++PDD TL+S+ AC+ LL G++ H + +
Sbjct: 288 IISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIR 347
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ +V+V NA++ MY++CG + + F ++ +LVSWN ++ A HGH EKA+ FS
Sbjct: 348 IKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFS 407
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M GF PD +T +++L AC HAG V++ + F M + +GI+P EHY C++D+L R
Sbjct: 408 KMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRG 467
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G+LE+A+++ Q MP E + +WG+LL AC ++ V L E ++ L+ + Y MLS
Sbjct: 468 GRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLS 527
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N++AAAG W V +RL MK GV K S IE+ ++VH F D SHP DKI+ L
Sbjct: 528 NIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQILV 587
Query: 575 RASVQMKSV 583
+ +K V
Sbjct: 588 KLGQDLKQV 596
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+++V +I+ F + A +F +IQ + +N +I + QN + +A F M
Sbjct: 54 DLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQ 113
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG--G 354
K + D+ T + AC+ L + H V + GF ++ V N++I YS+CG G
Sbjct: 114 KNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLG 173
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F ++ +LVSWN++I + G +A F +M + D +++ ++L
Sbjct: 174 VNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMA----ERDAVSWNTILDG 229
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
AG+++++ +LFE M + + ++ +V + G +E A + MPF+
Sbjct: 230 YVKAGEMSQAFNLFEKMPERNVV-----SWSTMVSGYCKTGDMEMARMLFDKMPFK 280
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 9/205 (4%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
N ++ H +I+ ++ V +I+ +S C + + F QI PN+ +NT+I A
Sbjct: 36 FNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRA 95
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
Q+ KA F M NG D T+ LL AC G + ++ + V+ YG
Sbjct: 96 HVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWL-PTVQMIHCHVEKYGFFG 154
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPF-EADTGVWGSLLAACVINLNVELGEL--AA 496
L+D S+ G L + + M E D W S++ V+ G+L A
Sbjct: 155 DLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGL-----VKAGDLGRAR 209
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAG 521
K E+ +++ + + + Y AG
Sbjct: 210 KLFDEMAERDAVSWNTILDGYVKAG 234
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 305/549 (55%), Gaps = 16/549 (2%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLF--DQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
TQ+ N A+++AG + F V N+++ Y + G + + +F
Sbjct: 163 TQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVF 222
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
+ MPV+++ SWN M++ R+D A F++MP+R+ ++NAMI+G+ ++G +A +
Sbjct: 223 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 282
Query: 165 LFEQMPRRN-----------VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
LF +M + V+S A L G ++ G+ A L M++ + V+ +I+
Sbjct: 283 LFSRMLHESSMAPDEFTITSVLSACANL-GNVRIGKQVHAYILRTEMAYNSQVT-NALIS 340
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
Y K+ AR + + + D NV TA++ G+ K+G +E+AR +F + +D V++
Sbjct: 341 TYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWT 400
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AMI GY QNG +EA+ LF MI +P+ TL +V + C++L L+ G+Q H IR+
Sbjct: 401 AMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 460
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIF 392
E + SV NA+ITMY+R G + F Q+ ++W ++I A AQHG E+A+
Sbjct: 461 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M G +PD IT++ +LSAC HAG VNE ++ + + I P HY C+VD+L+
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG +A + + MP E D WGSLL+AC ++ N EL ELAA+K+ +DP NS Y
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
++N+Y+A G W D R+ KE+ V K+ +SW I +K+H F D+ HP D ++
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700
Query: 573 LKRASVQMK 581
R ++K
Sbjct: 701 AARMWEEIK 709
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 151/572 (26%), Positives = 254/572 (44%), Gaps = 139/572 (24%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L V V N+ ++ + G A +F++M + V +WNA+++ G + +
Sbjct: 190 VVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLA 249
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PER------------ 141
++LF+SMP ++IVSWN MIAG N A F M P+
Sbjct: 250 ESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACAN 309
Query: 142 ---------------------NTATYNAMISGFLKHGRLEEATRLFEQMPRR--NVISYT 178
N+ NA+IS + K G +E A R+ +Q NVIS+T
Sbjct: 310 LGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFT 369
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----P-- 232
A+L+G++K G+++ AR + M+ ++VV+WT MI GY +N R EA +LF M P
Sbjct: 370 ALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEP 429
Query: 233 ------------------DYDKNVF-------------VVTAMITGFCKVGMLENARLLF 261
DY K + V A+IT + + G AR +F
Sbjct: 430 NSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMF 489
Query: 262 ERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
+++ K+ +++ +MI AQ+G EEA+ LF M++ ++PD T V V +ACS +
Sbjct: 490 DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 549
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
NEG++ + D QI +P + + ++
Sbjct: 550 NEGKRYY-----------------------------DQIKNEHQI-APEMSHYACMVDLL 579
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP 439
A+ G + +A F +M + +PD I + SLLSAC +V+++ +L EL K+ I P
Sbjct: 580 ARAGLFSEAQEFIRRMPV---EPDAIAWGSLLSAC----RVHKNAELAELAAEKLLSIDP 632
Query: 440 -SSEHYTCLVDILSRAGQLEKA---WQITQGMPFEADTGV-WGSLLAACVINLNVELGEL 494
+S Y+ + ++ S G+ A W+ + +TG W ++ ++
Sbjct: 633 NNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSW--------THIRSKIHVF 684
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
A + + PQ AVY M AA MW ++
Sbjct: 685 GADDV--VHPQRDAVYAM------AARMWEEI 708
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 199/447 (44%), Gaps = 80/447 (17%)
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
N++S+ AG R DA F +P RN T+N+++S F K GRL +A +F +
Sbjct: 66 NLLSYYGETAGGAGGLR--DARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAE 123
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKA-RALSDY---------MSFKNVVSWTVMITG---- 214
MP R+ +S+T M+ G + G +A + L D + NV+S +
Sbjct: 124 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG 183
Query: 215 -------------------------YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
Y K A +F RMP ++V AM++
Sbjct: 184 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP--VRSVSSWNAMVSLNT 241
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLV 308
+G ++ A LFE + + VS+NAMIAGY QNG+ +AL+LFS M+ + M PD+ T+
Sbjct: 242 HLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTIT 301
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG------ILDSELA- 361
SV +AC+ L + G+Q H ++R N V NA+I+ Y++ G I+D +
Sbjct: 302 SVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMET 361
Query: 362 --------------------------FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
F +++ ++V+W +I + Q+G ++A+ F
Sbjct: 362 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 421
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G +P+ T ++LS C ++ + ++ + SS ++ + +R+G
Sbjct: 422 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL-LEQSSSVSNAIITMYARSG 480
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
A ++ + + +T W S++ A
Sbjct: 481 SFPWARRMFDQVCWRKETITWTSMIVA 507
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 296/554 (53%), Gaps = 50/554 (9%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ A+I Y + ++N+F MP++++V+WN M+AG ++ A + M
Sbjct: 134 DLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQ 193
Query: 140 ER-----NTATYNAMISGFLKHGRLEEATRLFEQMPR-------RNVISYTAMLDGFMKK 187
+ N +T +++ +HG L + T + R V+ TA+LD + K
Sbjct: 194 DHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKC 253
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM---------------- 231
++ A + M +N V+W+ +I G+V +R EA LF M
Sbjct: 254 KQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASA 313
Query: 232 ----------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
++ ++++ + K G++ A + F+ I KD
Sbjct: 314 LRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDT 373
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+S+ A+++G QNG AEEA +F M +M+PD AT+VS+ ACS L L G+ SH
Sbjct: 374 ISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGS 433
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
VI G S+CN++I MY++CG I S F ++ + ++VSWNT+IA + HG ++A
Sbjct: 434 VIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEA 493
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
F M GF PD +TF+ L++AC H+G V E F+ M YGI+P EHY C+VD
Sbjct: 494 TTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVD 553
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L+R G L++A+Q Q MP +AD VWG+LL AC I+ N++LG+ ++ +++L P+ +
Sbjct: 554 LLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGN 613
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
+V+LSN+++AAG + + VR++ K +G K YSWIEI +H F+GGD SHPC I
Sbjct: 614 FVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDI 673
Query: 570 HLELKRASVQMKSV 583
+ EL V +K +
Sbjct: 674 YHELDNIMVDIKKL 687
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 203/438 (46%), Gaps = 21/438 (4%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVSWNC 117
G+++ ARQ+FD++ D +NA+I Y G + +L++SM P K +
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEATRLFEQMPRRNVI 175
+ + R A +T + A+I +++ R A +F +MP R+V+
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 176 SYTAMLDGFMKKGEVDKARA----LSDYMSFKNVVSWTVMIT------GYVKNERFCEAR 225
++ AML G+ G A A + D+ + S V + G + A
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
L + ++ V + TA++ + K L A +F + ++ V+++A+I G+
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 286 EEALRLFSGMIKMDMQPDDATLV-SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EA LF M+ + AT V S C++L L+ G Q H L+ ++G A+++ N+
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+++MY++ G I ++ + F +I + +S+ +++ Q+G E+A + F +M +PD
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
T +SL+ AC H + V + G+ + L+D+ ++ G+++ + Q+
Sbjct: 408 IATMVSLIPACSHLAALQHG-KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVF 466
Query: 465 QGMPFEADTGVWGSLLAA 482
MP D W +++A
Sbjct: 467 DKMPAR-DVVSWNTMIAG 483
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 186/416 (44%), Gaps = 31/416 (7%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
+ V + A + ++ ++ A ++F M ++ +TW+A+I G+ + E+ NLF+ M
Sbjct: 238 EQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDM 297
Query: 108 PVKNI-------VSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGR 158
V+ + V+ + + + + A + N+++S + K G
Sbjct: 298 LVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGL 357
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK- 217
+ EAT F+++ ++ ISY A+L G ++ G+ ++A + M N+ + +
Sbjct: 358 INEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPA 417
Query: 218 -------NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
C + R + + + ++I + K G ++ +R +F+++ +D V
Sbjct: 418 CSHLAALQHGKCSHGSVIIRGLALETS--ICNSLIDMYAKCGKIDLSRQVFDKMPARDVV 475
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVL 329
S+N MIAGY +G+ +EA LF GM PDD T + + ACS L+ EG+ +
Sbjct: 476 SWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTM 535
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIAAFAQHGHYE 387
+ G + ++ + +R GG+LD F Q ++ W ++ A H
Sbjct: 536 THKYGILPRMEHYICMVDLLAR-GGLLDEAYQFIQSMPLKADVRVWGALLGACRIH---- 590
Query: 388 KALIFFSQMG--LNGFDPDGITFLSLLSAC-GHAGKVNESMDLFELMVKVYGIIPS 440
K + Q+ + P+G LLS AG+ +E+ ++ ++ KV G S
Sbjct: 591 KNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV-RIIQKVKGFKKS 645
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 8/239 (3%)
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G L AR +F+RI D ++NA+I Y+ G A+ L+ M++ + P+ T V
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
ACSAL L GR H G ++ V A+I +Y RC + F ++ ++V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
+WN ++A +A HG Y A+ M G P+ T +SLL G + + +
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 431 MVKVYGIIPSSEHY----TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
++ + +E T L+D+ ++ QL A ++ GMP D W +L+ V+
Sbjct: 228 CLR--ACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV-TWSALIGGFVL 283
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 305/549 (55%), Gaps = 16/549 (2%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLF--DQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
TQ+ N A+++AG + F V N+++ Y + G + + +F
Sbjct: 57 TQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVF 116
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
+ MPV+++ SWN M++ R+D A F++MP+R+ ++NAMI+G+ ++G +A +
Sbjct: 117 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 176
Query: 165 LFEQMPRRN-----------VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
LF +M + V+S A L G ++ G+ A L M++ + V+ +I+
Sbjct: 177 LFSRMLHESSMAPDEFTITSVLSACANL-GNVRIGKQVHAYILRTEMAYNSQVT-NALIS 234
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
Y K+ AR + + + D NV TA++ G+ K+G +E+AR +F + +D V++
Sbjct: 235 TYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWT 294
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AMI GY QNG +EA+ LF MI +P+ TL +V + C++L L+ G+Q H IR+
Sbjct: 295 AMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 354
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIF 392
E + SV NA+ITMY+R G + F Q+ ++W ++I A AQHG E+A+
Sbjct: 355 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 414
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M G +PD IT++ +LSAC HAG VNE ++ + + I P HY C+VD+L+
Sbjct: 415 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 474
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG +A + + MP E D WGSLL+AC ++ N EL ELAA+K+ +DP NS Y
Sbjct: 475 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 534
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
++N+Y+A G W D R+ KE+ V K+ +SW I +K+H F D+ HP D ++
Sbjct: 535 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 594
Query: 573 LKRASVQMK 581
R ++K
Sbjct: 595 AARMWEEIK 603
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 150/572 (26%), Positives = 255/572 (44%), Gaps = 139/572 (24%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L V V N+ ++ + G A +F++M + V +WNA+++ G + +
Sbjct: 84 VVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLA 143
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PER------------ 141
++LF+SMP ++IVSWN MIAG N A F M P+
Sbjct: 144 ESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACAN 203
Query: 142 ---------------------NTATYNAMISGFLKHGRLEEATRLFEQMPRR--NVISYT 178
N+ NA+IS + K G +E A R+ +Q NVIS+T
Sbjct: 204 LGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFT 263
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----P-- 232
A+L+G++K G+++ AR + M+ ++VV+WT MI GY +N R EA +LF M P
Sbjct: 264 ALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEP 323
Query: 233 ------------------DYDKNVF-------------VVTAMITGFCKVGMLENARLLF 261
DY K + V A+IT + + G AR +F
Sbjct: 324 NSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMF 383
Query: 262 ERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
+++ K+ +++ +MI AQ+G EEA+ LF M++ ++PD T V V +ACS +
Sbjct: 384 DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 443
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
NEG++ + I+N + +P + + ++
Sbjct: 444 NEGKR-YYDQIKNEHQI-----------------------------APEMSHYACMVDLL 473
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP 439
A+ G + +A F +M + +PD I + SLLSAC +V+++ +L EL K+ I P
Sbjct: 474 ARAGLFSEAQEFIRRMPV---EPDAIAWGSLLSAC----RVHKNAELAELAAEKLLSIDP 526
Query: 440 -SSEHYTCLVDILSRAGQLEKA---WQITQGMPFEADTGV-WGSLLAACVINLNVELGEL 494
+S Y+ + ++ S G+ A W+ + +TG W ++ ++
Sbjct: 527 NNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSW--------THIRSKIHVF 578
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
A + + PQ AVY M AA MW ++
Sbjct: 579 GADDV--VHPQRDAVYAM------AARMWEEI 602
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 179/403 (44%), Gaps = 55/403 (13%)
Query: 127 RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
R+ DA F MPER+ ++ M+ G + GR EA + M L +
Sbjct: 7 RLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLS 66
Query: 187 KGEVDKARALSDYMSFKNVVSWTV-------------MITGYVKNERFCEARELFYRMPD 233
V +A A+ + V S+ V ++ Y K A +F RMP
Sbjct: 67 SCAVTQAGAVG-----RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP- 120
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++V AM++ +G ++ A LFE + + VS+NAMIAGY QNG+ +AL+LFS
Sbjct: 121 -VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179
Query: 294 GMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M+ + M PD+ T+ SV +AC+ L + G+Q H ++R N V NA+I+ Y++
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 239
Query: 353 GG------ILDSELA---------------------------FRQIHSPNLVSWNTIIAA 379
G I+D + F +++ ++V+W +I
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ Q+G ++A+ F M G +P+ T ++LS C ++ + ++ +
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL-LEQ 358
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
SS ++ + +R+G A ++ + + +T W S++ A
Sbjct: 359 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVA 401
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 33/248 (13%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
F K G L +AR +F + +D VS+ M+ G + G EA++ M P TL
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG-------------- 353
+V ++C+ Q GR+ H V++ G + V V N+V+ MY +CG
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 354 ----------------GILD-SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
G +D +E F + ++VSWN +IA + Q+G KAL FS+M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 397 -GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
+ PD T S+LSAC + G V + +++ + +S+ L+ +++G
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTE-MAYNSQVTNALISTYAKSG 240
Query: 456 QLEKAWQI 463
+E A +I
Sbjct: 241 SVENARRI 248
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
M+++ G + D+ F ++ + VSW ++ + G + +A+ M +GF P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 408 FLSLLSACG--HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
++LS+C AG V + F + + + +P + ++++ + G E A + +
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA---NSVLNMYGKCGDSETATTVFE 117
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGEL-AAKKMRELDPQNSAV 509
MP + W ++ ++LN LG + A+ + E P S V
Sbjct: 118 RMPVRS-VSSWNAM-----VSLNTHLGRMDLAESLFESMPDRSIV 156
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 175/489 (35%), Positives = 275/489 (56%), Gaps = 37/489 (7%)
Query: 130 DAFDYFQAMPERNTATY----------------------------------NAMISGFLK 155
DA F AMP R++ TY NA+I + K
Sbjct: 423 DALAAFSAMPRRDSFTYSFLIKALSAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSK 482
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
+G +A ++F++MP R+V+S+ + +++GE+ R L D M K+ VSW ++ GY
Sbjct: 483 NGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGY 542
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
K A ELF RMP+ +NV + M++G+CK G LE AR++F+++ K+ V++ M
Sbjct: 543 TKAGEVEAAFELFQRMPE--RNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIM 600
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
++ AQ G+ +EA +LF+ M + ++ D A +VS+ AC+ L+ G++ H V +
Sbjct: 601 VSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNL 660
Query: 336 EANVSVCNAVITMYSRCGGILDSELAF-RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ VCNA+I M+ +CG + ++ F + + VSWN+II FA HGH +KAL F+
Sbjct: 661 GRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFA 720
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
QM GF+PD +T +++LSAC H G V+E F M + YGI+P EHY C++D+L R
Sbjct: 721 QMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRG 780
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G +++A + + MP+E + +WGSLL+AC ++ NVE E+A ++ +L P N+ Y +LS
Sbjct: 781 GLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLS 840
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+YA AG W D+ + R+ MK G K SW+E+ H F GD H D+I +
Sbjct: 841 NIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVD 900
Query: 575 RASVQMKSV 583
R S +K V
Sbjct: 901 RLSSHVKHV 909
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 200/366 (54%), Gaps = 11/366 (3%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L S + FV NA I A S+ G S AR++FD+M +DV++WN + + G L
Sbjct: 461 VVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGV 520
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ LF MP K+ VSWN ++ G ++ AF+ FQ MPERN +++ M+SG+ K G LE
Sbjct: 521 RKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLE 580
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYV 216
A +F++MP +N++++T M+ +KG VD+A L M +V + ++
Sbjct: 581 MARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACA 640
Query: 217 KNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF--ERIQPKDCVSF 272
++ + + + R + ++ V A+I FCK G + A +F E +Q KD VS+
Sbjct: 641 ESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQ-KDSVSW 699
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N++I G+A +G ++AL LF+ M + PD T+++V +AC+ + ++EGR+ + R
Sbjct: 700 NSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMER 759
Query: 333 N-GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+ G + +I + R G I ++ +L PN V W ++++A H + E A
Sbjct: 760 DYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAE 819
Query: 391 IFFSQM 396
I +++
Sbjct: 820 IAVNEL 825
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
A A G +AL FS M + D T + A SA + R H V++ G
Sbjct: 413 APTALGGAPRDALAAFSAMPRRD----SFTYSFLIKALSAAGVAPV-RAVHSHVVKLGSV 467
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ V NA+I YS+ GG D+ F ++ ++VSWNT +AA + G F +M
Sbjct: 468 EDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEM 527
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
+ D +++ ++L AG+V + +LF+ M + + ++ +V + G
Sbjct: 528 ----PEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVV-----SWSTMVSGYCKKGD 578
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACV-INLNVELGELAAKKMRE 501
LE A I MP + + W +++AC L E G+L A +M+E
Sbjct: 579 LEMARVIFDKMPSK-NLVTWTIMVSACAQKGLVDEAGKLFA-QMKE 622
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 213/638 (33%), Positives = 331/638 (51%), Gaps = 69/638 (10%)
Query: 2 LCNSYFHQTYLKRILFPPILRILSTPDSCGNF--TPHSSNCLIRLFSTQYVFVNNAKISA 59
L + + +T+L L R+ PD+ F PH + F NA +SA
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNT-----------FSYNALLSA 835
Query: 60 LSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSW 115
+R G+ + AR LF + D ++NA+I Q+ ++ +M V N S+
Sbjct: 836 HARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSF 895
Query: 116 NCMIAGC--------------------------IDNDRID---------DAFDYFQAMPE 140
++ C I + +D +A F+AMPE
Sbjct: 896 ASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPE 955
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM---------KKGEVD 191
RN ++N++I+ + ++G + EA LF M + + L M ++G
Sbjct: 956 RNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQV 1015
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
AR + +++V ++ Y K R AR +F RM ++V T++ITG+ +
Sbjct: 1016 HARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMAS--RSVVSETSLITGYARS 1073
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
+E+A+++F ++ K+ +++N +IA YAQNG EEALRLF + + + P T +V
Sbjct: 1074 ANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVL 1133
Query: 312 TACSALQLLNEGRQSHVLVIRNGF------EANVSVCNAVITMYSRCGGILDSELAFRQI 365
AC + L G+Q+HV V++ GF E++V V N+++ MY + G I D F ++
Sbjct: 1134 NACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM 1193
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+ + VSWN +I AQ+G + AL F +M + PD +T + +LSACGH+G V E
Sbjct: 1194 AARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGR 1253
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
F M + +GIIPS +HYTC++D+L RAG L++ ++ + M E D +W SLL +C +
Sbjct: 1254 RYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRL 1313
Query: 486 NLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYS 545
+ NVE+GE AA K+ ELDP+NS YV+LSN+YA G W DV RVR MK +GV+KQ S
Sbjct: 1314 HKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCS 1373
Query: 546 WIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
WIEIG KV FL D HPC ++IH L+ +QM V
Sbjct: 1374 WIEIGRKVSVFLARDNGHPCKNEIHAILRIIQMQMSRV 1411
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 229/496 (46%), Gaps = 55/496 (11%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVSWNCMI 119
++ AR+ FD + + I+WN I+ Y G + ++F M P+ VS +
Sbjct: 202 LADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSH--AV 259
Query: 120 AGCIDNDRIDD-----AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
C DN+ +++ AF + E + ++++ + K G ++ A LF P +++
Sbjct: 260 LACRDNNALEEGRCIHAF-VLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDM 318
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
+ T+++ G G + A+ + + M +N+VSW M+TGY+++ A LF +M
Sbjct: 319 VMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQE 378
Query: 235 DKNVFVVT-------------------------------------AMITGFCKVGMLENA 257
+ +T A++ + K G L +A
Sbjct: 379 TREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSA 438
Query: 258 R--LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
LLFE +D S+N++I+GY ++ ++E AL + M + ++ P+ +T S AC+
Sbjct: 439 ERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACA 497
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+ LL +G Q H +IR G+E + + + +I MY +C S F S +++ WN+
Sbjct: 498 NIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNS 557
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+I A G E L F +M G D +TFL L +C G V F LM+
Sbjct: 558 MIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMD-E 616
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
IIP EHY C++++L + G + + + MPFE T +W + C N +LGE A
Sbjct: 617 SIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERA 676
Query: 496 AKKMRELDPQNSAVYV 511
AK + + +P +V
Sbjct: 677 AKCINDSNPLTPVQFV 692
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 224/494 (45%), Gaps = 58/494 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
F+ N I +L+ G ++ AR+LFD M +D +WNAIIT + G E+ +LF +M
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 110 KNIVSWNCMIAG-------CID-----------------------NDRID---------D 130
I + +A C+D +D D
Sbjct: 145 LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLAD 204
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRRNVISYTAML--- 181
A F + E N ++N ++ + G + A +F +M P +S+ +
Sbjct: 205 ARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRD 264
Query: 182 DGFMKKGEVDKARALSD-YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
+ +++G A L Y +V S V + Y K A+ LF P K++ +
Sbjct: 265 NNALEEGRCIHAFVLRHGYEHHVHVRSSVVDM--YAKCGAMDAAQSLFNLAP--MKDMVM 320
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
T++++G G + +A+ +FE ++ ++ VS+NAM+ GY ++ AL LF M +
Sbjct: 321 STSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETR 380
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE- 359
+ D TL SV +AC+ + + +G + H I+ GF ++ + NA++ MYS+CG + +E
Sbjct: 381 EFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAER 440
Query: 360 -LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
L F + SWN++I+ + +H E AL ++M + P+ TF S L+AC +
Sbjct: 441 LLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQ-SEVTPNQSTFSSALAACANI 499
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ + M + M++ G + L+D+ + Q + + +I + P D +W S
Sbjct: 500 FLLKQGMQIHAYMIR-KGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARP-SRDVILWNS 557
Query: 479 LLAACVINLNVELG 492
++ C + E G
Sbjct: 558 MIFGCAYSGKGEYG 571
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 176/404 (43%), Gaps = 40/404 (9%)
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
T +N I G + +A LF+ MP R+ S+ A++ + G +A +L M+
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 203 KNV----VSWTVMITGYVKNERFCEARELFYRMP--DYDKNVFVVTAMITGFCKVGMLEN 256
+ + +++ + C AR+L + D+ NV + TA++ + +L +
Sbjct: 145 LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLAD 204
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR F+ I + +S+N ++ Y G+ + A+ +F M+ ++P T+ AC
Sbjct: 205 ARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRD 264
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG---------------------- 354
L EGR H V+R+G+E +V V ++V+ MY++CG
Sbjct: 265 NNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSI 324
Query: 355 ---------ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I D++ F + NLVSWN ++ + + AL+ F QM + D
Sbjct: 325 VSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDA 384
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
IT S+LSAC + + ++ +K G S LV + S+ G L A ++
Sbjct: 385 ITLGSVLSACTGILDIGKGEEVHAFAIKC-GFFSSPILKNALVRMYSKCGCLRSAERLLL 443
Query: 466 -GMPFEADTGVWGSLLAACVINLNVELGELAAKKMR-ELDPQNS 507
M E D+ W SL++ + E A KM+ E+ P S
Sbjct: 444 FEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSEVTPNQS 487
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 157/342 (45%), Gaps = 23/342 (6%)
Query: 37 SSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
++ L L + + ++ + +S L+ G+I+ A+++F+ M +++++WNA++TGY ++
Sbjct: 305 AAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMD 364
Query: 97 LQESKNLFQSMPVK----NIVSWNCMIAGC---IDNDRIDDAFDY-----FQAMPERNTA 144
L + LFQ M + + ++ +++ C +D + ++ + F + P
Sbjct: 365 LTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSP----I 420
Query: 145 TYNAMISGFLKHGRLEEATR--LFEQMPRRNVISYTAMLDGFMKKGEVDKA-RALSDYMS 201
NA++ + K G L A R LFE R+ S+ +++ G+ + + A AL+ S
Sbjct: 421 LKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS 480
Query: 202 --FKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENA 257
N +++ + + ++ M Y+ + + + +I +CK + +
Sbjct: 481 EVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYS 540
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
+FE +D + +N+MI G A +G E L LF M K ++ D T + +C +
Sbjct: 541 IRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISE 600
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+ GR L++ + +I + + G +++ E
Sbjct: 601 GHVRLGRSYFTLMMDESIIPRIEHYECMIELLGKHGCMVELE 642
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 177/468 (37%), Gaps = 89/468 (19%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D I + +I Y + S +F++ P ++++ WN MI GC + + + D F M
Sbjct: 520 DDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQ 579
Query: 140 ER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS----YTAMLDGFMKKGEVD 191
++ ++ T+ + + G + F M ++I Y M++ K G +
Sbjct: 580 KQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDESIIPRIEHYECMIELLGKHGCMV 639
Query: 192 KARALSDYMSFKNVVSWTVMITGYVK---NERFCEARE------------LFYRMPDYDK 236
+ ++M F+ + + I + N + E F DY+
Sbjct: 640 ELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQFVATVDYES 699
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N A T F G E L P S +G + L ++ GM
Sbjct: 700 NDGGREAESTSFSSEG--EGCEEL-----P---FSLEGEASGSLPAPLTTRPLAIWYGMA 749
Query: 297 KMDMQPDDATLVSVFTACSAL-QLLNEG------RQSHVLVIRNGFEANVSVCNAVITMY 349
+ VS A + L LL R +H +++ F A + N +++ Y
Sbjct: 750 RHHHH----HFVSHLRASAPLADLLRSAPNLPAARAAHARALKSPFVAETFLLNTLVSAY 805
Query: 350 SRCGGILDSELAFRQIHSPNL-------------------------------VSWNTIIA 378
+R G + D+ F +I PN S+N +IA
Sbjct: 806 ARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIA 865
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
A AQH AL+F + M + F + +F S LSAC A K + + V+V+ ++
Sbjct: 866 ALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACA-AEKDSRT------GVQVHALV 918
Query: 439 PSSEHY------TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
S H + L+D+ ++ E+A ++ + MP E + W SL+
Sbjct: 919 SKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMP-ERNIVSWNSLI 965
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 298/555 (53%), Gaps = 52/555 (9%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ A+I Y + ++N+F MP++++V+WN M+AG ++ A + M
Sbjct: 134 DLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQ 193
Query: 140 ER-----NTATYNAMISGFLKHGRLEEATRL--------FEQMPRRNVISYTAMLDGFMK 186
+ N +T +++ +HG L + T + EQ + +I TA+LD + K
Sbjct: 194 DHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIG-TALLDMYAK 252
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--------------- 231
++ A + M +N V+W+ +I G+V +R EA LF M
Sbjct: 253 CKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVAS 312
Query: 232 -----------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
++ ++++ + K G++ A + F+ I KD
Sbjct: 313 ALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKD 372
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
+S+ A+++G QNG AEEA +F M +M+PD AT+VS+ ACS L L G+ SH
Sbjct: 373 TISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHG 432
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
VI G S+CN++I MY++CG I S F ++ + ++VSWNT+IA + HG ++
Sbjct: 433 SVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKE 492
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
A F M GF PD +TF+ L++AC H+G V E F+ M YGI+P EHY C+V
Sbjct: 493 ATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMV 552
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
D+L+R G L++A+Q Q MP +AD VWG+LL AC I+ N++LG+ ++ +++L P+ +
Sbjct: 553 DLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTG 612
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDK 568
+V+LSN+++AAG + + VR++ K +G K YSWIEI +H F+GGD SHPC
Sbjct: 613 NFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRD 672
Query: 569 IHLELKRASVQMKSV 583
I+ EL V +K +
Sbjct: 673 IYHELDNIMVDIKKL 687
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 203/438 (46%), Gaps = 21/438 (4%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVSWNC 117
G+++ ARQ+FD++ D +NA+I Y G + +L++SM P K +
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEATRLFEQMPRRNVI 175
+ + R A +T + A+I +++ R A +F +MP R+V+
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 176 SYTAMLDGFMKKGEVDKARA----LSDYMSFKNVVSWTVMIT------GYVKNERFCEAR 225
++ AML G+ G A A + D+ + S V + G + A
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
L + ++ V + TA++ + K L A +F + ++ V+++A+I G+
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 286 EEALRLFSGMIKMDMQPDDATLV-SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EA LF M+ + AT V S C++L L+ G Q H L+ ++G A+++ N+
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+++MY++ G I ++ + F +I + +S+ +++ Q+G E+A + F +M +PD
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
T +SL+ AC H + V + G+ + L+D+ ++ G+++ + Q+
Sbjct: 408 IATMVSLIPACSHLAALQHG-KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVF 466
Query: 465 QGMPFEADTGVWGSLLAA 482
MP D W +++A
Sbjct: 467 DKMPAR-DVVSWNTMIAG 483
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 186/416 (44%), Gaps = 31/416 (7%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
+ V + A + ++ ++ A ++F M ++ +TW+A+I G+ + E+ NLF+ M
Sbjct: 238 EQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDM 297
Query: 108 PVKNI-------VSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGR 158
V+ + V+ + + + + A + N+++S + K G
Sbjct: 298 LVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGL 357
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK- 217
+ EAT F+++ ++ ISY A+L G ++ G+ ++A + M N+ + +
Sbjct: 358 INEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPA 417
Query: 218 -------NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
C + R + + + ++I + K G ++ +R +F+++ +D V
Sbjct: 418 CSHLAALQHGKCSHGSVIIRGLALETS--ICNSLIDMYAKCGKIDLSRQVFDKMPARDVV 475
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVL 329
S+N MIAGY +G+ +EA LF GM PDD T + + ACS L+ EG+ +
Sbjct: 476 SWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTM 535
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIAAFAQHGHYE 387
+ G + ++ + +R GG+LD F Q ++ W ++ A H
Sbjct: 536 THKYGILPRMEHYICMVDLLAR-GGLLDEAYQFIQSMPLKADVRVWGALLGACRIH---- 590
Query: 388 KALIFFSQMG--LNGFDPDGITFLSLLSAC-GHAGKVNESMDLFELMVKVYGIIPS 440
K + Q+ + P+G LLS AG+ +E+ ++ ++ KV G S
Sbjct: 591 KNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV-RIIQKVKGFKKS 645
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 8/239 (3%)
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G L AR +F+RI D ++NA+I Y+ G A+ L+ M++ + P+ T V
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
ACSAL L GR H G ++ V A+I +Y RC + F ++ ++V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
+WN ++A +A HG Y A+ M G P+ T +SLL G + + +
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 431 MVKVYGIIPSSEHY----TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
++ + +E T L+D+ ++ QL A ++ GMP D W +L+ V+
Sbjct: 228 CLR--ACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV-TWSALIGGFVL 283
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 209/625 (33%), Positives = 321/625 (51%), Gaps = 86/625 (13%)
Query: 43 RLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
RL T + VF+ N I + G + AR++FD+M+ ++V ++N+II+ + GF+ E
Sbjct: 49 RLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDE 108
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLK 155
S LF MP K+ SWN MIAG +DR ++A D+F M N ++ + +S +
Sbjct: 109 SAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSR 168
Query: 156 HGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
L+ ++ + + +V + ++D + K G V AR + D M KNVVSW +
Sbjct: 169 LKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCL 228
Query: 212 ITGYVKNERFCEARELFYRM------PD-------------------------------- 233
IT Y +N EA E F RM PD
Sbjct: 229 ITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDK 288
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFER------------------------------ 263
+ ++ + A++ + K G + AR +F+R
Sbjct: 289 FRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFA 348
Query: 264 -IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
I+ KD VS+NA+IAGY QNG EEAL LF + + + P T ++ A + L L
Sbjct: 349 TIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLEL 408
Query: 323 GRQSHVLVIRNGF------EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
GRQ+H V+++GF E ++ V N++I MY +CG + + F + + VSWNT+
Sbjct: 409 GRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTM 468
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I +AQ+G+ +AL F +M +G PD +T + L AC HAG V E F M K +G
Sbjct: 469 IIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHG 528
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
++P +HYTC+VD+L RAG LE+A + + MP + D VW SLL+AC ++ N+ LG+ A
Sbjct: 529 LLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVA 588
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
+K+ E+DP +S YV+L+N+Y+ G W D VR LM+ +GV KQ SWI+I + VH F
Sbjct: 589 EKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVF 648
Query: 557 LGGDMSHPCIDKIHLELKRASVQMK 581
+ D HP +I+ LK + M+
Sbjct: 649 MVKDKRHPQKKEIYSILKLLTKHMR 673
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 128/318 (40%), Gaps = 61/318 (19%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT 89
CG + + C+ + +S +++ + AAR +F + KD+++WNA+I
Sbjct: 306 CGRV--NEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIA 363
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID---------------NDRIDDAFDY 134
GY QNG +E+ LF+ + +++ + ++ + + F
Sbjct: 364 GYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGF-R 422
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
FQ+ E + N++I ++K G +EE R+FE M ++ +S
Sbjct: 423 FQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVS------------------ 464
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC---KV 251
W MI GY +N EA ELF +M + + VT MI C
Sbjct: 465 -------------WNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVT-MIGTLCACSHA 510
Query: 252 GMLENARLLFERIQPKDCV-----SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
G++E R F + + + + M+ + G EEA L M K QPD
Sbjct: 511 GLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPK---QPDAVV 567
Query: 307 LVSVFTACSALQLLNEGR 324
S+ +AC + + G+
Sbjct: 568 WSSLLSACKVHRNITLGK 585
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 45/215 (20%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG--------- 353
D + + C L+ + R H +I+ F V + N +I +Y +CG
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 354 ---------------------GILD-SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
G +D S F + + SWN++IA FAQH +E+AL
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY------T 445
+F +M + F + +F S LSAC + +L +++G+I S++ +
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSR-------LKDLKLGAQIHGLISKSKYSLDVFMGS 195
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
L+D S+ G + A ++ GM E + W L+
Sbjct: 196 GLIDFYSKCGLVGCARRVFDGME-EKNVVSWNCLI 229
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 299/562 (53%), Gaps = 58/562 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ A++ Y + L ++ ++F +MP +++V+WN M+AG + A + +M
Sbjct: 159 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 218
Query: 140 ER------NTATYNAMISGFLKHGRLEEATRLFEQMPR------RN--------VISYTA 179
+ N +T A++ + G L + T + R RN V+ TA
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTA 278
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------- 231
+LD + K G + AR + D M +N V+W+ +I G+V R +A LF M
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 232 ------------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLF 261
++ ++++ + K G+++ A LF
Sbjct: 339 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 398
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ + KD VS++A+++GY QNG AEEA +F M +++PD AT+VS+ ACS L L
Sbjct: 399 DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQ 458
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
GR SH VI G + S+CNA+I MY++CG I S F + S ++VSWNT+IA +
Sbjct: 459 HGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG 518
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
HG ++A F +M GF PDG+TF+ LLSAC H+G V E F +M YG+ P
Sbjct: 519 IHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRM 578
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
EHY C+VD+LSR G L++A++ Q MP AD VW +LL AC + N++LG+ ++ ++E
Sbjct: 579 EHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQE 638
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
L P+ + +V+LSN+Y+AAG + + VR++ K QG K SWIEI +H F+GGD
Sbjct: 639 LGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQ 698
Query: 562 SHPCIDKIHLELKRASVQMKSV 583
SHP +I+ EL V +K +
Sbjct: 699 SHPQSPEIYRELDNILVGIKKL 720
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 21/336 (6%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T V + A + ++ G + AR++FD M ++ +TW+A+I G+ + ++ LF++
Sbjct: 270 TDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKA 329
Query: 107 MPVKNI-----VSWNCMIAGC--IDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHG 157
M + + S + C +D+ R+ + A + N+++S + K G
Sbjct: 330 MLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAG 389
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
+++A LF++M ++ +SY+A++ G+++ G ++A + M NV + +
Sbjct: 390 LIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 449
Query: 218 --------NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
C + R + A+I + K G ++ +R +F + +D
Sbjct: 450 ACSHLAALQHGRCSHGSVIIR--GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI 507
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHV 328
VS+N MIAGY +G+ +EA LF M + PD T + + +ACS L+ EG+ HV
Sbjct: 508 VSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHV 567
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
+ G + ++ + SR GG LD F Q
Sbjct: 568 MRHGYGLTPRMEHYICMVDLLSR-GGFLDEAYEFIQ 602
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNG--VAEEALRLFSGMIKMDMQPDDATLVS 309
G L A LF++I D ++N +I Y+ + A + L L+ M++ + P++ T
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
ACSAL + GR H I G +A++ V A++ MY +C + D+ F + + +
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 370 LVSWNTIIAAFAQHGHYEKAL--IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
LV+WN ++A +A HG Y A+ + QM ++ P+ T ++LL G + + +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 428 FELMVKVY-------------GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
++ G++ T L+D+ ++ G L A ++ MP +
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLG----TALLDMYAKCGSLLYARRVFDAMPARNEV- 305
Query: 475 VWGSLLAACVI 485
W +L+ V+
Sbjct: 306 TWSALIGGFVL 316
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP--- 108
+ NA I ++ G+I +RQ+F+ M ++D+++WN +I GY +G +E+ LF M
Sbjct: 478 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 537
Query: 109 -VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
+ V++ C+++ C + + + +F M T Y M+ + G L+EA
Sbjct: 538 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEA 597
Query: 163 TRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALS---DYMSFKNVVSWTVMITGYVKN 218
+ MP R +V + A+L +D + +S + + ++ ++ Y
Sbjct: 598 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 657
Query: 219 ERFCEAREL 227
RF EA E+
Sbjct: 658 GRFDEAAEV 666
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 296/527 (56%), Gaps = 45/527 (8%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
AR++ D+M KD +TW ++ GY + G + ++++F+ + K V WN MI+G + +
Sbjct: 216 ARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMA 275
Query: 129 DDAFDYFQAMP-ER---NTATYNAMIS-----GFLKHGRLEEATRLFEQ---MPRRNVIS 176
+AF+ F+ M ER + T+ +++S G HG+ + Q +P +
Sbjct: 276 VEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPV 335
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
A++ + K G + AR + D M+ K+VVSW +++GYV++
Sbjct: 336 NNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESS----------------- 378
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
L+ A +FE + K+ +S+ M++GY G AE+AL+LF+ M
Sbjct: 379 ----------------CLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMR 422
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+++P D T AC L L G+Q H +++ GFE + S NA+ITMY+RCG +
Sbjct: 423 SENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVK 482
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
++ L F + + + VSWN +I+A QHGH +AL F +M G PD I+FL++L+AC
Sbjct: 483 EAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN 542
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
H+G V+E FE M + +GIIP +HYT L+D+L RAG++ +A + + MPFE +W
Sbjct: 543 HSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIW 602
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
++L+ C + ++ELG AA ++ ++ PQ+ Y++LSN Y+AAG W D RVR LM+++
Sbjct: 603 EAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDR 662
Query: 537 GVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
GV K+ SWIE GNKVH FL GD HP +++ L+ +M+ +
Sbjct: 663 GVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKL 709
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 196/439 (44%), Gaps = 61/439 (13%)
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFL 154
L + LF + P VS ++A DR+ A +F A+P R+T +NA+IS +
Sbjct: 75 LPAAATLFCADPCP--VSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYA 132
Query: 155 KHGRLEEATRLFEQM-----PRRNVISYTAMLD--GFMKKGEVDKARAL---------SD 198
+ A +F + R + S+TA+L G + V L
Sbjct: 133 RASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGG 192
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
+S N + M + R +AR++ MP+ D + T M+ G+ + G + AR
Sbjct: 193 ALSVCNALVALYMKCESPEATR--DARKVLDEMPNKDDLTW--TTMVVGYVRRGDVGAAR 248
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+FE + K V +NAMI+GY +G+A EA LF M+ + D+ T SV +AC+ +
Sbjct: 249 SVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVG 308
Query: 319 LLNEGRQSHVLVIR--NGF--EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
L G+ H +IR F EA + V NA++T YS+CG I + F + ++VSWN
Sbjct: 309 LFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWN 368
Query: 375 TIIAAFAQ------------------------------HGHY-EKALIFFSQMGLNGFDP 403
TI++ + + HG + E AL F++M P
Sbjct: 369 TILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKP 428
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
T+ ++ACG G + L +V++ G S+ L+ + +R G +++A +
Sbjct: 429 CDYTYAGAIAACGELGALKHGKQLHGHIVQL-GFEGSNSAGNALITMYARCGAVKEAHLM 487
Query: 464 TQGMPFEADTGVWGSLLAA 482
MP D+ W ++++A
Sbjct: 488 FLVMP-NIDSVSWNAMISA 505
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 39/255 (15%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
VNNA ++ S+ G I+ AR++FD MT KDV++WN I++GY ++ L ++ +F+ MP KN
Sbjct: 335 VNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKN 394
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMIS-----GFLKHGRLEEA 162
+SW M++G + +DA F M N TY I+ G LKHG+
Sbjct: 395 ELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHG 454
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+ N A++ + + G V +A + M + VSW MI+ ++
Sbjct: 455 HIVQLGFEGSNSAG-NALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGR 513
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
EA ELF RM + E I P D +SF ++ +
Sbjct: 514 EALELFDRM----------------------------VAEGIYP-DRISFLTVLTACNHS 544
Query: 283 GVAEEALRLFSGMIK 297
G+ +E R F M +
Sbjct: 545 GLVDEGFRYFESMKR 559
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 304/549 (55%), Gaps = 16/549 (2%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLF--DQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
TQ+ N A+++AG + F V N+++ Y + G + + +F
Sbjct: 163 TQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVF 222
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
+ MPV+++ SWN M++ R+D A F++MP R+ ++NAMI+G+ ++G +A +
Sbjct: 223 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALK 282
Query: 165 LFEQMPRRN-----------VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
LF +M + V+S A L G ++ G+ A L M++ + V+ +I+
Sbjct: 283 LFSRMLHESSMAPDEFTITSVLSACANL-GNVRIGKQVHAYILRTEMAYNSQVT-NALIS 340
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
Y K+ AR + + + D NV TA++ G+ K+G +E+AR +F + +D V++
Sbjct: 341 TYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWT 400
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AMI GY QNG +EA+ LF MI +P+ TL +V + C++L L+ G+Q H IR+
Sbjct: 401 AMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 460
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIF 392
E + SV NA+ITMY+R G + F Q+ ++W ++I A AQHG E+A+
Sbjct: 461 LLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M G +PD IT++ +LSAC HAG VNE ++ + + I P HY C+VD+L+
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG +A + + MP E D WGSLL+AC ++ N EL ELAA+K+ +DP NS Y
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
++N+Y+A G W D R+ KE+ V K+ +SW I +K+H F D+ HP D ++
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700
Query: 573 LKRASVQMK 581
R ++K
Sbjct: 701 AARMWEEIK 709
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 151/572 (26%), Positives = 254/572 (44%), Gaps = 139/572 (24%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L V V N+ ++ + G A +F++M + V +WNA+++ G + +
Sbjct: 190 VVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLA 249
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PER------------ 141
++LF+SMP ++IVSWN MIAG N A F M P+
Sbjct: 250 ESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACAN 309
Query: 142 ---------------------NTATYNAMISGFLKHGRLEEATRLFEQMPRR--NVISYT 178
N+ NA+IS + K G +E A R+ +Q NVIS+T
Sbjct: 310 LGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFT 369
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----P-- 232
A+L+G++K G+++ AR + M+ ++VV+WT MI GY +N R EA +LF M P
Sbjct: 370 ALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEP 429
Query: 233 ------------------DYDKNVF-------------VVTAMITGFCKVGMLENARLLF 261
DY K + V A+IT + + G AR +F
Sbjct: 430 NSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMF 489
Query: 262 ERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
+++ K+ +++ +MI AQ+G EEA+ LF M++ ++PD T V V +ACS +
Sbjct: 490 DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 549
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
NEG++ + D QI +P + + ++
Sbjct: 550 NEGKRYY-----------------------------DQIKNEHQI-APEMSHYACMVDLL 579
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP 439
A+ G + +A F +M + +PD I + SLLSAC +V+++ +L EL K+ I P
Sbjct: 580 ARAGLFSEAQEFIRRMPV---EPDAIAWGSLLSAC----RVHKNAELAELAAEKLLSIDP 632
Query: 440 -SSEHYTCLVDILSRAGQLEKA---WQITQGMPFEADTGV-WGSLLAACVINLNVELGEL 494
+S Y+ + ++ S G+ A W+ + +TG W ++ ++
Sbjct: 633 NNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSW--------THIRSKIHVF 684
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
A + + PQ AVY M AA MW ++
Sbjct: 685 GADDV--VHPQRDAVYAM------AARMWEEI 708
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 199/447 (44%), Gaps = 80/447 (17%)
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
N++S+ AG R DA F +P RN T+N+++S F K GRL +A +F +
Sbjct: 66 NLLSYYGETAGGAGGLR--DARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAE 123
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKA-RALSDY---------MSFKNVVSWTVMITG---- 214
MP R+ +S+T M+ G + G +A + L D + NV+S +
Sbjct: 124 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG 183
Query: 215 -------------------------YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
Y K A +F RMP ++V AM++
Sbjct: 184 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMP--VRSVSSWNAMVSLNT 241
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLV 308
+G ++ A LFE + + VS+NAMIAGY QNG+ +AL+LFS M+ + M PD+ T+
Sbjct: 242 HLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTIT 301
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG------ILDSELA- 361
SV +AC+ L + G+Q H ++R N V NA+I+ Y++ G I+D +
Sbjct: 302 SVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMET 361
Query: 362 --------------------------FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
F +++ ++V+W +I + Q+G ++A+ F
Sbjct: 362 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 421
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G +P+ T ++LS C ++ + ++ + SS ++ + +R+G
Sbjct: 422 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL-LERSSSVSNAIITMYARSG 480
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
A ++ + + +T W S++ A
Sbjct: 481 SFPWARRMFDQVCWRKETITWTSMIVA 507
>gi|224066751|ref|XP_002302197.1| predicted protein [Populus trichocarpa]
gi|222843923|gb|EEE81470.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/446 (38%), Positives = 272/446 (60%), Gaps = 12/446 (2%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
M A C D I D+ F+ MPERN T+NAMISG+ K+G ++ A+ LF++M RN +S+
Sbjct: 1 MYAKCGD---IPDSRKLFEYMPERNVVTWNAMISGYGKNGDMKSASVLFDKMSTRNAVSW 57
Query: 178 TAMLDGFMKKGEVDKARALSDYMSF--KNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
M+DGF + G++ AR + + F KNVV+WTVMI GY AR LF MP
Sbjct: 58 IEMIDGFARSGDMVAARRTFNEVPFELKNVVTWTVMIDGYASKGEMEAARLLFEDMPQ-- 115
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+N FV ++MI+G+CK+G ++ AR +F+R+ ++ V++N++I GY+QNG EEAL F M
Sbjct: 116 RNFFVWSSMISGYCKIGNVKEARAIFDRVPVRNLVNWNSLICGYSQNGFCEEALDAFGKM 175
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+PD+ T+V V +AC+ L LL+ G+ H ++ G + N V NA++ MY++CG +
Sbjct: 176 QNEGYEPDEVTVVGVLSACAQLSLLDVGKDVHKMICAKGMKLNEFVVNALVDMYAKCGDL 235
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ L F ++ + N WN++I+ FA HG ++AL FF +M + PD ITFLS+LSAC
Sbjct: 236 TGARLIFERMTNKNNACWNSMISGFAVHGKTKEALEFFGRMEESNEKPDEITFLSVLSAC 295
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
H G V +++F M + YG+ S +HY CLVD+L RAG+++ A+ + + MP + + V
Sbjct: 296 VHGGFVEVGLEIFSKMER-YGLSASIKHYGCLVDLLGRAGRIQDAYHLIKSMPMKPNDTV 354
Query: 476 WGSLLAACVINLNVELGELAAKKM----RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
WG+ L AC I+++ ++ E + + +D N Y +L N+YA +G W RV +
Sbjct: 355 WGAFLGACRIHMDNDMVEQVVEDVCTSDSSVDSGNDPHYALLLNIYAGSGSWEKAGRVSM 414
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFL 557
+M ++G+ K S + + N + +
Sbjct: 415 VMADRGLQKTSGRSSLMLENTEQFHI 440
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 183/367 (49%), Gaps = 48/367 (13%)
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA 120
++ G I +R+LF+ M ++V+TWNA+I+GY +NG ++ + LF M +N VSW MI
Sbjct: 3 AKCGDIPDSRKLFEYMPERNVVTWNAMISGYGKNGDMKSASVLFDKMSTRNAVSWIEMID 62
Query: 121 GCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYT 178
G + + A F +P +N T+ MI G+ G +E A LFE MP+RN ++
Sbjct: 63 GFARSGDMVAARRTFNEVPFELKNVVTWTVMIDGYASKGEMEAARLLFEDMPQRNFFVWS 122
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC-EARELFYRM------ 231
+M+ G+ K G V +ARA+ D + +N+V+W +I GY +N FC EA + F +M
Sbjct: 123 SMISGYCKIGNVKEARAIFDRVPVRNLVNWNSLICGYSQN-GFCEEALDAFGKMQNEGYE 181
Query: 232 PD-------------------------------YDKNVFVVTAMITGFCKVGMLENARLL 260
PD N FVV A++ + K G L ARL+
Sbjct: 182 PDEVTVVGVLSACAQLSLLDVGKDVHKMICAKGMKLNEFVVNALVDMYAKCGDLTGARLI 241
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
FER+ K+ +N+MI+G+A +G +EAL F M + + +PD+ T +SV +AC +
Sbjct: 242 FERMTNKNNACWNSMISGFAVHGKTKEALEFFGRMEESNEKPDEITFLSVLSACVHGGFV 301
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS----PNLVSWNTI 376
G + + R G A++ ++ + R G I D A+ I S PN W
Sbjct: 302 EVGLEIFSKMERYGLSASIKHYGCLVDLLGRAGRIQD---AYHLIKSMPMKPNDTVWGAF 358
Query: 377 IAAFAQH 383
+ A H
Sbjct: 359 LGACRIH 365
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 137/307 (44%), Gaps = 54/307 (17%)
Query: 57 ISALSRAGKISAARQLFDQM--TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
I +R+G + AAR+ F+++ K+V+TW +I GY G ++ ++ LF+ MP +N
Sbjct: 61 IDGFARSGDMVAARRTFNEVPFELKNVVTWTVMIDGYASKGEMEAARLLFEDMPQRNFFV 120
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP---- 170
W+ MI+G + +A F +P RN +N++I G+ ++G EEA F +M
Sbjct: 121 WSSMISGYCKIGNVKEARAIFDRVPVRNLVNWNSLICGYSQNGFCEEALDAFGKMQNEGY 180
Query: 171 -----------------------------------RRNVISYTAMLDGFMKKGEVDKARA 195
+ N A++D + K G++ AR
Sbjct: 181 EPDEVTVVGVLSACAQLSLLDVGKDVHKMICAKGMKLNEFVVNALVDMYAKCGDLTGARL 240
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDKNVFVVTAMI-TGF 248
+ + M+ KN W MI+G+ + + EA E F RM PD + V++A + GF
Sbjct: 241 IFERMTNKNNACWNSMISGFAVHGKTKEALEFFGRMEESNEKPDEITFLSVLSACVHGGF 300
Query: 249 CKVGMLENARLLFERIQPKDCVS-FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+VG+ +++ ER + + ++ + G ++A L M M+P+D
Sbjct: 301 VEVGLEIFSKM--ERYGLSASIKHYGCLVDLLGRAGRIQDAYHLIK---SMPMKPNDTVW 355
Query: 308 VSVFTAC 314
+ AC
Sbjct: 356 GAFLGAC 362
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 320/579 (55%), Gaps = 20/579 (3%)
Query: 28 DSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAI 87
D+ G H+ I++ S + VFV ++ ++ +AG AR++FD M ++ ++W +
Sbjct: 123 DAAGGRLAHA--VAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATM 180
Query: 88 ITGYWQNGFLQESKNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN- 142
I+GY E+ LF+ M +N + +++ + +++ + +N
Sbjct: 181 ISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNG-KQIHCIAVKNG 239
Query: 143 ----TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD 198
+ NA+++ + K G L++A + FE +N I+++AM+ G+ + G+ DKA L
Sbjct: 240 LLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFS 299
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY------DKNVFVVTAMITGFCKVG 252
M + G + A ++ DY + ++V+TA++ + K
Sbjct: 300 SMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCS 359
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ +AR F+ +Q D V + +MI GY QNG E+AL L+ M + P++ T+ SV
Sbjct: 360 SIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLK 419
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
ACS+L L +G+Q H ++ GF V + +A+ TMY++CG + D L FR++ + +++S
Sbjct: 420 ACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVIS 479
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WN +I+ +Q+G ++AL F +M L G PD +TF+++LSAC H G V F +M
Sbjct: 480 WNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMF 539
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
+G+ P EHY C+VDILSRAG+L++A + T+ + +W +L AC N ELG
Sbjct: 540 DEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELG 599
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNK 552
A +K+ EL Q S+ YV+LS++Y+A G W DV RVR +MK +GV+K+ SWIE+ +
Sbjct: 600 AYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSG 659
Query: 553 VHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIAT 591
VH F+ D HP I IH+EL++ S QMK D+ E AT
Sbjct: 660 VHVFVVKDQMHPQIGDIHVELRQLSKQMK--DEGYEPAT 696
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 214/450 (47%), Gaps = 51/450 (11%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA--FDYFQAMPERN 142
N+++ Y + L+E+K +F+ + K++VSWNC+I G + + + FQ M N
Sbjct: 44 NSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAEN 103
Query: 143 TATYNAMISGFLKH---------GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
TA +G GRL A + + R+V +++++ + K G +A
Sbjct: 104 TAPNAHTFAGVFTAASTLVDAAGGRLAHAVAI-KMDSCRDVFVGSSLMNMYCKAGLTPEA 162
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELF--YRMPDYDKNVFVVT--------- 242
R + D M +N VSW MI+GY + EA LF R + +N FV T
Sbjct: 163 RKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLP 222
Query: 243 --------------------------AMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
A++T + K G L++A FE K+ ++++AMI
Sbjct: 223 ELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMI 282
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
GYAQ+G +++AL+LFS M ++P + T V V ACS L EG+Q H +++ GFE
Sbjct: 283 TGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFE 342
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ + V A++ MY++C I+D+ F + P++V W ++I + Q+G E AL + +M
Sbjct: 343 SQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRM 402
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
+ G P+ +T S+L AC + + + VK YG + L + ++ G
Sbjct: 403 EMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK-YGFGLEVPIGSALSTMYAKCGC 461
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVIN 486
L+ + + MP D W ++++ N
Sbjct: 462 LKDGTLVFRRMPAR-DVISWNAMISGLSQN 490
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 332/600 (55%), Gaps = 26/600 (4%)
Query: 4 NSYFHQTYLK--RILFPPILRILSTPDSCGNFTP-HSSNCLI-RLFSTQYVFVNNAKISA 59
N + ++L+ FPP++R +CGN +CL+ +L V++ + I
Sbjct: 130 NEFLSTSFLQSDHYTFPPVIR------ACGNLDDGRKVHCLVLKLGFECDVYIAASFIHF 183
Query: 60 LSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSW 115
SR G +S A LFD M +D+ TWNA+I+G++ NG + E+ +F M K++ V+
Sbjct: 184 YSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTI 243
Query: 116 NCMIAGCID-NDRIDDAFDYFQAMP---ERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
+ ++ C+ +D I + A+ E + NA+I+ + K G L A +F QM
Sbjct: 244 SSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKV 303
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS--WTVMITGYVKNE--RFCEAREL 227
R+++S+ ++L F + + A + + M VV T++ V E F +R +
Sbjct: 304 RDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSI 363
Query: 228 ---FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
R + ++ + A+I + K+G +++AR +FE + KD +S+N++I GY+QNG+
Sbjct: 364 HGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGL 423
Query: 285 AEEALRLFSGM-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
A EA+ ++S M P+ T VS+ TA S L L +G ++H +I+N ++ V
Sbjct: 424 ANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVST 483
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
++ MY +CG + D+ F ++ + VSWN II+ HG+ KA+ F +M G P
Sbjct: 484 CLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKP 543
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
D ITF+SLLSAC H+G V+E F+LM + YGI PS +HY C+VD+ RAG LEKA+
Sbjct: 544 DHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNF 603
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW 523
+ MP D VWG+LL AC I+ NVEL + + +++ +N YV+LSN+YA G W
Sbjct: 604 VKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHW 663
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
V VR L +++G+ K +S IE+ K+ F G+ +HP ++I+ EL+ + +MKS+
Sbjct: 664 EGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSI 723
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 151/330 (45%), Gaps = 36/330 (10%)
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF-------------YRMP-- 232
G++ AR D + K+V +W MI+ Y + F A + F Y P
Sbjct: 89 GDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPV 148
Query: 233 --------------------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
++ +V++ + I + + G + A LF+ + +D ++
Sbjct: 149 IRACGNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTW 208
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NAMI+G+ NG EAL +F M + D T+ S+ C L + G HV I+
Sbjct: 209 NAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIK 268
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
G E ++ VCNA+I MY++ G + +E F Q+ ++VSWN+++AAF Q+ AL
Sbjct: 269 LGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGV 328
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
+++M G PD +T +SL S G S + + + + ++D+ +
Sbjct: 329 YNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYA 388
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ G ++ A ++ +G+P + D W SL+
Sbjct: 389 KLGFIDSARKVFEGLPVK-DVISWNSLITG 417
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 126/252 (50%), Gaps = 14/252 (5%)
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+++F+ +I + +G + +ARL F++IQ KD ++N+MI+ YA+ G A+ F+
Sbjct: 73 QSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEF 132
Query: 296 IKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ +Q D T V AC L++GR+ H LV++ GFE +V + + I YSR G
Sbjct: 133 LSTSFLQSDHYTFPPVIRACGN---LDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGF 189
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F + ++ +WN +I+ F +G +AL F +M D +T SLL
Sbjct: 190 VSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPI 249
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEH--YTC--LVDILSRAGQLEKAWQITQGMPFE 470
C + + +++ VY I E + C L+++ ++ G+L A I M
Sbjct: 250 CVQLDDI-----ISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVR 304
Query: 471 ADTGVWGSLLAA 482
D W SLLAA
Sbjct: 305 -DIVSWNSLLAA 315
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 9/181 (4%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+F C+ + L +Q H L++ +G ++ + +I Y+ G I + L F QI + +
Sbjct: 49 IFLYCTKVHL---AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKD 105
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF-DPDGITFLSLLSACGHAGKVNESMDLF 428
+ +WN++I+A+A+ GH+ A+ F++ F D TF ++ ACG+ +++ +
Sbjct: 106 VYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LDDGRKVH 162
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
L++K+ G + SR G + A + M D G W ++++ +N
Sbjct: 163 CLVLKL-GFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIR-DIGTWNAMISGFYLNGK 220
Query: 489 V 489
V
Sbjct: 221 V 221
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 261/443 (58%), Gaps = 3/443 (0%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T NA+I + K+ L +A ++F++M R+V+S+ + ++KGEVD AR++ D M
Sbjct: 238 DTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSMFDEMP 297
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
K+ VSW M+ GY K EA ELF RMP +NV + +++ +CK G +E AR++F
Sbjct: 298 EKDTVSWNTMLDGYAKAGEAEEAFELFQRMPG--RNVVSWSTVVSAYCKKGDMEMARVIF 355
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+++ K+ V++ M++ AQ G+ EA RLF+ M + ++ D +VS+ AC+ L
Sbjct: 356 DKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESGCLA 415
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF-RQIHSPNLVSWNTIIAAF 380
G++ H V + + VCNA++ M+ +CG + ++ F +I + VSWN II F
Sbjct: 416 LGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGF 475
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A HGH EKAL F+QM GF PD +T +++LSAC H G V E F M YGI P
Sbjct: 476 AMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPE 535
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
EHY C+VD+L R G +++A + + MP+E + +WGSLL+AC ++ NVE ELAA ++
Sbjct: 536 IEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSLLSACRLHKNVEYAELAANELS 595
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
L P N+ Y +LSN+YA AG W D+ + R+ MK G K SWIE+ H F GD
Sbjct: 596 NLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELDEAFHEFTVGD 655
Query: 561 MSHPCIDKIHLELKRASVQMKSV 583
HP D+I + R S +K V
Sbjct: 656 RKHPESDQISDMIDRLSSHVKCV 678
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 197/400 (49%), Gaps = 45/400 (11%)
Query: 57 ISALSRAGKI---SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
I AL+ AG +A +F + +D NA+I Y +N L ++K +F M +++V
Sbjct: 212 IKALATAGVTPVRAAHTHVFKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVV 271
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN +A + +D A F MPE++T ++N M+ G+ K G EEA LF++MP RN
Sbjct: 272 SWNTAMAAMVRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRN 331
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V+S++ ++ + KKG+++ AR + D M KN+V+WT+M++ + EA LF M +
Sbjct: 332 VVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKE 391
Query: 234 -------------------------------------YDKNVFVVTAMITGFCKVGMLEN 256
++ V A++ FCK G +
Sbjct: 392 AAIELDVVAVVSILAACAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNR 451
Query: 257 ARLLFE-RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A +F+ I KD VS+N +I G+A +G E+AL LF+ M + PD TL++V +AC+
Sbjct: 452 ADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACT 511
Query: 316 ALQLLNEGRQSHV-LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSW 373
+ L+ EGR+ + G + + ++ + R G I ++ + + PN V W
Sbjct: 512 HMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIW 571
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
++++A H + E A + ++ L+ P ++LS
Sbjct: 572 GSLLSACRLHKNVEYAELAANE--LSNLQPSNAGNYAVLS 609
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N ++ YA N + AL +F + M ++ D S A + R +H V +
Sbjct: 176 NTLLRAYALNSLPHAALAVF---VDMPLRQRDTFTYSFLIKALATAGVTPVRAAHTHVFK 232
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
G + V NA+I YS+ G+ D++ F ++ + ++VSWNT +AA + G + A
Sbjct: 233 LGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSM 292
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M + D +++ ++L AG+ E+ +LF+ M + ++ +V
Sbjct: 293 FDEMP----EKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVV-----SWSTVVSAYC 343
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ G +E A I MP + + W +++AC
Sbjct: 344 KKGDMEMARVIFDKMPAK-NLVTWTIMVSAC 373
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 304/550 (55%), Gaps = 18/550 (3%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R + VF NA + S+ G I A +F++M DV++WNA I+G +G +
Sbjct: 231 VVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRA 290
Query: 101 KNLFQSMP----VKNIVSWN-----CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
L M V N+ + + C AG + R F +A+ + + ++
Sbjct: 291 LELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGF-MVKAVADFDEFVAVGLVD 349
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK------NV 205
+ KHG L++A ++F+ MPRR++I + A++ G G + +L M + N
Sbjct: 350 MYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNR 409
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFER 263
+ ++ +E C R++ + V+ +I + K G L+ A +F+
Sbjct: 410 TTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE 469
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ D +S M+ +Q E+A++LF M++ ++PD L S+ AC++L +G
Sbjct: 470 SRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+Q H +I+ F ++V NA++ Y++CG I D+++AF + +VSW+ +I AQH
Sbjct: 530 KQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQH 589
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
GH ++AL F +M G P+ IT S+LSAC HAG V+++ FE M + +GI + EH
Sbjct: 590 GHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEH 649
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y C++DIL RAG+LE A ++ MPF+A+ VWG+LL A ++ + ELG +AA+K+ L+
Sbjct: 650 YACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLE 709
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P+ S +V+L+N YA+AGMW ++ +VR LMK+ V K+ A SW+EI +KVH F+ GD SH
Sbjct: 710 PEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSH 769
Query: 564 PCIDKIHLEL 573
P I+ +L
Sbjct: 770 PMTRDIYGKL 779
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/518 (24%), Positives = 243/518 (46%), Gaps = 45/518 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMT----TKDVITWNAIITGYWQNGFLQESKNLFQ 105
VFV NA ++ G + AR++FD+ ++ ++WN +I+ Y +N ++ +F+
Sbjct: 135 VFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFR 194
Query: 106 SM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHG 157
M N ++C++ C + ++ A+ E++ T NA++ + K G
Sbjct: 195 EMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLG 254
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS----FKNVVSWTVMIT 213
+E A +FE+MP +V+S+ A + G + G +A L M NV + + ++
Sbjct: 255 DIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLK 314
Query: 214 GYVKNERFCEARELFYRM----PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
F R++ M D+D+ FV ++ + K G L++AR +F+ + +D
Sbjct: 315 ACAGAGAFNLGRQIHGFMVKAVADFDE--FVAVGLVDMYAKHGFLDDARKVFDFMPRRDL 372
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIK--MDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ +NA+I+G + +G E L LF M K +D+ + TL SV + ++ + + RQ H
Sbjct: 373 ILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVH 432
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
L + G ++ V N +I Y +CG + + F++ S +++S T++ A +Q H E
Sbjct: 433 ALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGE 492
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT-- 445
A+ F QM G +PD SLL+AC S+ +E +V+ + + +
Sbjct: 493 DAIKLFVQMLRKGLEPDSFVLSSLLNAC-------TSLSAYEQGKQVHAHLIKRQFTSDV 545
Query: 446 ----CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM-R 500
LV ++ G +E A G+P E W +++ + + G+ A R
Sbjct: 546 FAGNALVYAYAKCGSIEDADMAFSGLP-ERGIVSWSAMIGGLAQHGH---GKRALDLFHR 601
Query: 501 ELDPQNSAVYVMLSNLYAA---AGMWRDVTRVRLLMKE 535
LD + ++ L+++ +A AG+ D + MKE
Sbjct: 602 MLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKE 639
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 170/355 (47%), Gaps = 23/355 (6%)
Query: 147 NAMISGFLKH-------GRLEEATR-LFEQMPRRNVISYTAMLDGFMKKGEVDKA----R 194
+ +++GF H RL A R +F+++P +S+++++ + G A R
Sbjct: 33 SGLLAGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFR 92
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
A+ N + V++ + RF +VFV A++ + GM+
Sbjct: 93 AMRGRGVPCNEFALPVVLK-CAPDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMV 151
Query: 255 ENARLLFERI----QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+ AR +F+ ++ VS+N MI+ Y +N + +A+ +F M+ +P++ V
Sbjct: 152 DEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCV 211
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
AC+ + L GRQ H V+R G+E +V NA++ MYS+ G I + F ++ + ++
Sbjct: 212 VNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADV 271
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
VSWN I+ HGH +AL QM +G P+ T S+L AC AG N +
Sbjct: 272 VSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGF 331
Query: 431 MVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
MVK + + + LVD+ ++ G L+ A ++ MP D +W +L++ C
Sbjct: 332 MVKA---VADFDEFVAVGLVDMYAKHGFLDDARKVFDFMP-RRDLILWNALISGC 382
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 202/429 (47%), Gaps = 20/429 (4%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N ++ SR SAAR +FD++ ++W++++T Y NG +++ F++M + +
Sbjct: 40 SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGV 99
Query: 113 VSWN---CMIAGCIDNDRIDDAFDYFQAMPER---NTATYNAMISGFLKHGRLEEATRLF 166
++ C + R A + A+ R + NA+++ + G ++EA R+F
Sbjct: 100 PCNEFALPVVLKCAPDVRFG-AQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMF 158
Query: 167 EQM----PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKN 218
++ RN +S+ M+ ++K + A + M + N ++ ++ +
Sbjct: 159 DEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGS 218
Query: 219 ERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
R++ + Y+K+VF A++ + K+G +E A +FE++ D VS+NA I
Sbjct: 219 RDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFI 278
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+G +G AL L M + P+ TL SV AC+ N GRQ H +++ +
Sbjct: 279 SGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVAD 338
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ V ++ MY++ G + D+ F + +L+ WN +I+ + G + + L F +M
Sbjct: 339 FDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRM 398
Query: 397 GLNGFDPD--GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
G D D T S+L + + + + + L K+ G++ S L+D +
Sbjct: 399 RKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKI-GLLSDSHVINGLIDSYWKC 457
Query: 455 GQLEKAWQI 463
GQL+ A ++
Sbjct: 458 GQLDYAIKV 466
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 211/662 (31%), Positives = 331/662 (50%), Gaps = 117/662 (17%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQES 100
I+ +VFV N+ ++ ++ I+ AR+LFD+M + DV++WN+II+ Y NG E+
Sbjct: 85 IKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEA 144
Query: 101 KNLFQSM----PVKNIVSWNCMIAGCIDND----------------RIDDAFD------- 133
LF M V N ++ + C D+ R+ D +
Sbjct: 145 LCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAM 204
Query: 134 --YFQAMPE----------RNTATYNAMISGFLKHGRLEEATRLF----------EQMPR 171
F MPE ++ T+N+M++GF+++G EA F +Q+
Sbjct: 205 YVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSI 264
Query: 172 RNVISYTAMLDGFMKKGEVDKARALS------------------------------DYMS 201
++I + L G++ G+ A A+ D M+
Sbjct: 265 ISIIVASGRL-GYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMA 323
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMP----DYDKNVF------------------ 239
K+++SWT GY +N+ + +A EL ++ D D +
Sbjct: 324 HKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKE 383
Query: 240 --------------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ +I + + G+++ A +FE I+ KD VS+ +MI+ Y NG+A
Sbjct: 384 IHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLA 443
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+AL +FS M + ++PD TLVS+ +A +L L +G++ H +IR GF S+ N +
Sbjct: 444 NKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTL 503
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY+RCG + D+ F + NL+ W +I+A+ HG+ E A+ F +M PD
Sbjct: 504 VDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDH 563
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
ITFL+LL AC H+G VNE E+M Y + P EHYTCLVD+L R LE+A+QI +
Sbjct: 564 ITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVK 623
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
M E VW +LL AC I+ N E+GE+AA+K+ ELD N YV++SN++AA G W+D
Sbjct: 624 SMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKD 683
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDD 585
V VR+ MK G+TK SWIE+GNK+H FL D HP DKI+ +L + + ++K
Sbjct: 684 VEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGG 743
Query: 586 FV 587
+V
Sbjct: 744 YV 745
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 149/287 (51%), Gaps = 9/287 (3%)
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM-----SFKNVVSWT 209
K G + +A +F++M R++ ++ AM+ G++ GE A + M SF +
Sbjct: 4 KCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPV 63
Query: 210 VMITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
++ + + FC A E+ Y D VFVV +++ + K + AR LF+R+ +
Sbjct: 64 LLKACGIVEDLFCGA-EIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVR 122
Query: 268 -DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
D VS+N++I+ Y+ NG+ EAL LFS M+K + + T + AC + G Q
Sbjct: 123 NDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQI 182
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H ++++G +V V NA++ MY R G + ++ + F + ++V+WN+++ F Q+G Y
Sbjct: 183 HAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLY 242
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+AL FF + PD ++ +S++ A G G + ++ +K
Sbjct: 243 SEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIK 289
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY +CG +LD+E+ F ++ ++ +WN ++ + +G AL + +M G D T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
F LL ACG + ++ L +K YG LV + ++ + A ++ M
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIK-YGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 468 PFEADTGVWGSLLAA 482
D W S+++A
Sbjct: 120 YVRNDVVSWNSIISA 134
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 215/616 (34%), Positives = 317/616 (51%), Gaps = 74/616 (12%)
Query: 14 RILFPPILRILST-PDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQL 72
R FP +L+ S ++ H +RL S V+V+ A + ++ G + A+++
Sbjct: 119 RFTFPFVLKACSALKEASEGREIHCDIKRLRLESN--VYVSTALVDFYAKCGCLDDAKEV 176
Query: 73 FDQMTTKDVITWNAIITGY-WQNGFLQESKNLFQSMPVKNIVSWN-CMIAGCIDNDRIDD 130
FD+M +DV+ WN++I+G+ G E L M +N VS N I G +
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM--QNDVSPNSSTIVGVL------- 227
Query: 131 AFDYFQAMPERNTATYNAMISGF-LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
A+ + N+ + I GF ++ G + + V+ T +LD + K
Sbjct: 228 -----PAVAQVNSLRHGKEIHGFCVRRGFVGD------------VVVGTGILDVYGKCQC 270
Query: 190 VDKARALSDYMSF-KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI--- 245
+D AR + D M KN V+W+ M+ YV + EA ELF ++ +V V++A+
Sbjct: 271 IDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLAT 330
Query: 246 ------------TGFC-------------------------KVGMLENARLLFERIQPKD 268
TG C K G++ A F + +D
Sbjct: 331 VIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRD 390
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
VSF A+I+GY QNG +EE LR+F M + P+ ATL SV AC+ L L+ G SH
Sbjct: 391 AVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHC 450
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
I GF A+ +CNA+I MY++CG I + F ++H +VSWNT+I A+ HG +
Sbjct: 451 YAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLE 510
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL+ F M G PD +TF+ L+SAC H+G V E F M + +GIIP EHY C+V
Sbjct: 511 ALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMV 570
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
D+LSRAG ++ + MP E D VWG+LL+AC + NVELGE +KK+++L P+++
Sbjct: 571 DLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTG 630
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM-SHPCID 567
+V+LSN+Y+A G W D +VR KEQG K SWIEI VH FLGG SHP +
Sbjct: 631 NFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLT 690
Query: 568 KIHLELKRASVQMKSV 583
+I +L V+MK +
Sbjct: 691 QISNKLDELLVEMKRL 706
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/443 (39%), Positives = 266/443 (60%), Gaps = 2/443 (0%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E ++ N++I + L A +LF R+V+S+ AM+DG++K+GE+ R + D
Sbjct: 32 ECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDR 91
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M ++V+SW +I GY + EA+ LF MP+ +N+ +M++GF K G +E A
Sbjct: 92 MVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPE--RNLVSWNSMLSGFVKCGNVEEAFG 149
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LF + +D VS+N+M+A YAQ G EAL LF M + ++P +AT+VS+ +AC+ L
Sbjct: 150 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGA 209
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L++G H + N E N V A++ MY++CG I + F + S ++++WNTIIA
Sbjct: 210 LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAG 269
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
A HGH ++A F +M +P+ ITF+++LSAC HAG V+E L + M YGI P
Sbjct: 270 MAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEP 329
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
EHY C++D+L+RAG LE+A ++ MP E + G+LL C I+ N ELGE+ K++
Sbjct: 330 KVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRL 389
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
L P +S Y++LSN+YAAA W D +VR LMK G++K S IE+ VH F+ G
Sbjct: 390 INLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAG 449
Query: 560 DMSHPCIDKIHLELKRASVQMKS 582
D SHP +KI+ +L ++KS
Sbjct: 450 DWSHPESNKIYDKLNEIHTRLKS 472
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 186/345 (53%), Gaps = 8/345 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
++ N+ I + + AA+QLF + +DV++WNA+I GY + G + ++ +F M +
Sbjct: 36 YIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCR 95
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+++SWN +I G +ID+A F MPERN ++N+M+SGF+K G +EEA LF +MP
Sbjct: 96 DVISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMP 155
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
R+V+S+ +ML + + G+ ++A AL D M V + + A +
Sbjct: 156 CRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLH 215
Query: 231 MPDY------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+ Y + N V TA++ + K G + A +F ++ KD +++N +IAG A +G
Sbjct: 216 LHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGH 275
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVLVIRNGFEANVSVCN 343
+EA +LF M + ++P+D T V++ +ACS +++EG++ + G E V +
Sbjct: 276 VKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYD 335
Query: 344 AVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
VI + +R G + ++ EL PN + ++ HG++E
Sbjct: 336 CVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFE 380
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 153/321 (47%), Gaps = 51/321 (15%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L L S + V NA I + G++ R +FD+M +DVI+WN II GY G + E+
Sbjct: 57 LFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEA 116
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
K LF MP +N+VSWN M++G + +++AF F MP R+ ++N+M++ + + G+
Sbjct: 117 KRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPN 176
Query: 161 EATRLFEQM------PRR---------------------------------NVISYTAML 181
EA LF+QM P N I TA++
Sbjct: 177 EALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALV 236
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVF 239
D + K G++ A + + M K+V++W +I G + EA++LF M + + N
Sbjct: 237 DMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDI 296
Query: 240 VVTAMITGFCKVGMLENARLLFE------RIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
AM++ GM++ + L + I+PK ++ +I A+ G+ EEA+ L
Sbjct: 297 TFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPK-VEHYDCVIDLLARAGLLEEAMELIG 355
Query: 294 GMIKMDMQPDDATLVSVFTAC 314
M M+P+ + L ++ C
Sbjct: 356 ---TMPMEPNPSALGALLGGC 373
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 145/287 (50%), Gaps = 20/287 (6%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ + ++V ++I + L A+ LF +D VS+NAMI GY + G +F
Sbjct: 31 FECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFD 90
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ D+ + ++ + + ++E ++ + E N+ N++++ + +CG
Sbjct: 91 RMVCRDV----ISWNTIINGYAIVGKIDEAKR----LFDEMPERNLVSWNSMLSGFVKCG 142
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ ++ F ++ ++VSWN+++A +AQ G +AL F QM G P T +SLLS
Sbjct: 143 NVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLS 202
Query: 414 ACGHAGKVNESMDLFELM----VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
AC H G +++ + L + ++V I+ T LVD+ ++ G++ A Q+ M
Sbjct: 203 ACAHLGALDKGLHLHTYINDNRIEVNSIVG-----TALVDMYAKCGKISLATQVFNAMES 257
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRE--LDPQNSAVYVMLS 514
+ D W +++A I+ +V+ + K+M+E ++P + MLS
Sbjct: 258 K-DVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLS 303
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
V AC+ + G H V+++GFE + + N++I +Y+ + ++ F +
Sbjct: 6 VIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRD 65
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+VSWN +I + + G + F +M D I++ ++++ GK++E+ LF+
Sbjct: 66 VVSWNAMIDGYVKRGEMGHTRMVFDRMVCR----DVISWNTIINGYAIVGKIDEAKRLFD 121
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
M + + + ++ + G +E+A+ + MP D W S+LA
Sbjct: 122 EMPERNLV-----SWNSMLSGFVKCGNVEEAFGLFSEMPCR-DVVSWNSMLA 167
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 180/581 (30%), Positives = 316/581 (54%), Gaps = 52/581 (8%)
Query: 57 ISALSRAGKISAARQLFDQMT----TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+SA + G + QL + + D+I A++ Y ++ + +F + +N+
Sbjct: 321 LSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENV 380
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQ 168
V WN M+ D + ++F F+ M + N TY +++ G L+ ++ Q
Sbjct: 381 VLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQ 440
Query: 169 MPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+ + NV + ++D + K G++D A + ++ +VVSWT +I+GY ++ F EA
Sbjct: 441 VIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEA 500
Query: 225 RELFYRMPD-------------------------------------YDKNVFVVTAMITG 247
+ F M + Y +++ + A+++
Sbjct: 501 LKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSL 560
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ + G ++ A L FE+I KD +S+N +I+G+AQ+G E+AL++F+ M + ++ T
Sbjct: 561 YARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTF 620
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
S +A + + + +G+Q H ++I+ GF++++ V NA+IT Y++CG I D+ F ++
Sbjct: 621 GSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPE 680
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N VSWN +I ++QHG+ +A+ F +M G P+ +TF+ +LSAC H G V + +
Sbjct: 681 KNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGY 740
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
FE M K +G++P HY C+VD++SRAG L +A + + MP E D +W +LL+AC ++
Sbjct: 741 FESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHK 800
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
NVE+GE AA+ + EL+P++SA YV+LSN+YA +G W + R +M+ +GV K+ SWI
Sbjct: 801 NVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWI 860
Query: 548 EIGNKVHYFLGGDMSHPCIDKIH---LELKRASVQMKSVDD 585
E+ N VH F GD HP DKI+ EL + + ++ D
Sbjct: 861 EVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQD 901
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 215/450 (47%), Gaps = 26/450 (5%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
++N I ++ G I +AR++FD + TKD ++W A+I+G+ QNG+ +E+ +LF M
Sbjct: 149 ISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAG 208
Query: 112 IVS----WNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEAT 163
I ++ +++GC D F+ T NA+++ + + A
Sbjct: 209 IFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAE 268
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL-----SDYMSFKNVVSWTVMITGYVKN 218
++F +M ++ +S+ +++ G ++G D A L DY+ + V+ +++ N
Sbjct: 269 KVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLK-PDCVTVASLLSACASN 327
Query: 219 ERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
C+ +L + ++ V A++ + ++ A +F Q ++ V +N M+
Sbjct: 328 GALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVML 387
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+ + E+ R+F M + P+ T S+ C+++ L+ G Q H VI+ GF+
Sbjct: 388 VAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQ 447
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
NV VC+ +I MY++ G + + + R + ++VSW +I+ +AQH + +AL F +M
Sbjct: 448 FNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEM 507
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G D I F S +SAC +N+ + V G LV + +R G+
Sbjct: 508 LNRGIQSDNIGFSSAISACAGIQALNQGRQI-HAQSYVSGYSEDLSIGNALVSLYARCGR 566
Query: 457 LEKAWQITQGMPFE----ADTGVWGSLLAA 482
+++A+ + FE D+ W L++
Sbjct: 567 IKEAY-----LEFEKIDAKDSISWNGLISG 591
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 217/437 (49%), Gaps = 23/437 (5%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMI 119
G + ++F+ M + V +W+ II+G+ + +LF M +N+ +S+ ++
Sbjct: 59 GDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVL 118
Query: 120 AGCIDNDRIDDAFDYFQAMPER--------NTATYNAMISGFLKHGRLEEATRLFEQMPR 171
C RI Y + + R + N +I + K+G + A ++F+ +
Sbjct: 119 RAC-SGHRI--GIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCT 175
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMS----FKNVVSWTVMITGYVKNERFCEAREL 227
++ +S+ AM+ GF + G ++A L M F ++ +++G K + F +L
Sbjct: 176 KDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQL 235
Query: 228 FYRMPDYDKNV--FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ Y ++ +V A++T + ++ +A +F ++Q KD VSFN++I+G AQ G +
Sbjct: 236 HALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFS 295
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+ AL LF+ M + ++PD T+ S+ +AC++ L +G Q H VI+ G +++ V A+
Sbjct: 296 DGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGAL 355
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ +Y C I + F + N+V WN ++ AF + + ++ F QM + G P+
Sbjct: 356 LDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQ 415
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
T+ S+L C G ++ + ++K G + + L+D+ ++ G+L+ A I +
Sbjct: 416 FTYPSILRTCTSVGALDLGEQIHTQVIKT-GFQFNVYVCSVLIDMYAKHGKLDTAHVILR 474
Query: 466 GMPFEADTGVWGSLLAA 482
+ E D W +L++
Sbjct: 475 TLT-EDDVVSWTALISG 490
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 13/297 (4%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N ++ + G L+ ++FE MP R+V S+ ++ GFM+K ++ L M +NV
Sbjct: 49 NKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVS 108
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDK----------NVFVVTAMITGFCKVGMLEN 256
+ + R C + R + + + +I + K G++ +
Sbjct: 109 PTEISFASVL---RACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIIS 165
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR +F+ + KD VS+ AMI+G++QNG EEA+ LF M + P SV + C+
Sbjct: 166 ARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTK 225
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
++L + G Q H LV + G VCNA++T+YSR + +E F ++ S + VS+N++
Sbjct: 226 IKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSL 285
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
I+ AQ G + AL F++M + PD +T SLLSAC G + + L ++K
Sbjct: 286 ISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIK 342
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L E ++ H +++ GF +CN ++ +Y G + F + + ++ SW+ II+
Sbjct: 26 LVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISG 85
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC-GH 417
F + + L FS M P I+F S+L AC GH
Sbjct: 86 FMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGH 124
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/572 (33%), Positives = 315/572 (55%), Gaps = 47/572 (8%)
Query: 57 ISALSRAGKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
I+AL G + Q+ + + + +N++I+ Y + G L++++++F M +++
Sbjct: 201 IAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDW 260
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
V+WN MIAG + N + + F+ F M + + +K L + M +
Sbjct: 261 VTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCK 320
Query: 173 NV--------ISYTAMLDGFMKKGEVDKARALSDYMS-FKNVVSWTVMITGYVKNERFCE 223
+ I TA++ K E+D A +L M KNVVSWT MI+G ++N +
Sbjct: 321 ALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQ 380
Query: 224 ARELFYRM---------------------------------PDYDKNVFVVTAMITGFCK 250
A LF +M +Y+++ V TA++ + K
Sbjct: 381 AVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVK 440
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+G +A +FE I+ KD ++++AM+AGYAQ G EEA +LF +IK ++P++ T SV
Sbjct: 441 LGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSV 500
Query: 311 FTAC-SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
AC S +G+Q H I+ + V +A++TMY++ G I + F++ +
Sbjct: 501 INACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERD 560
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
LVSWN++I+ ++QHG +KAL F +M D D +TF+ +++AC HAG V + F
Sbjct: 561 LVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFN 620
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
M+ + I P+ +HY+C++D+ SRAG LEKA I MPF VW +LL A ++ NV
Sbjct: 621 SMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNV 680
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
ELGELAA+K+ L P++SA YV+LSN+YAAAG W++ T VR LM ++ V K+ YSWIE+
Sbjct: 681 ELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEV 740
Query: 550 GNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
NK + FL GD++HP ++I+ +L S+++K
Sbjct: 741 KNKTYSFLAGDLTHPLSNQIYSKLSELSIRLK 772
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 138/274 (50%), Gaps = 38/274 (13%)
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------ 231
T+++D +MK V+ R + D M +NVVSWT ++ GY N + ELF +M
Sbjct: 132 TSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVL 191
Query: 232 PD-------------------------------YDKNVFVVTAMITGFCKVGMLENARLL 260
P+ +++ + V ++I+ + ++GML +AR +
Sbjct: 192 PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDV 251
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F++++ +D V++N+MIAGY +NG E +F+ M ++P T SV +C++L+ L
Sbjct: 252 FDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLREL 311
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAA 379
+ +++GF + V A++ S+C + D+ F + N+VSW +I+
Sbjct: 312 ALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISG 371
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
Q+G ++A+ FSQM G P+ T+ ++L+
Sbjct: 372 CLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILT 405
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 129/250 (51%), Gaps = 1/250 (0%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+V V T+++ + K + + R +F+ + ++ VS+ +++AGY+ NG+ LF M
Sbjct: 127 HVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQ 186
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ P+ T+ +V A ++ G Q H +V+++GFE + V N++I++YSR G +
Sbjct: 187 YEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLR 246
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F ++ + V+WN++IA + ++G + F++M L G P +TF S++ +C
Sbjct: 247 DARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCA 306
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
++ + L + G T L+ LS+ +++ A + M + W
Sbjct: 307 SLREL-ALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSW 365
Query: 477 GSLLAACVIN 486
++++ C+ N
Sbjct: 366 TAMISGCLQN 375
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 4/232 (1%)
Query: 257 ARLLFERI--QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
A LF++I +P N ++ Y+++ +EAL LF ++ +QPD++TL VF C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ GRQ H ++ G +VSV +++ MY + + D F ++ N+VSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+++A ++ +G Y F QM G P+ T ++++A + G V + + ++VK
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK- 222
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+G + + L+ + SR G L A + M D W S++A V N
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSMIAGYVRN 273
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 7 FHQTYLKRI-----LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALS 61
FHQ + I F ++ ++P + I++ + V++A ++ +
Sbjct: 482 FHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYA 541
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNC 117
+ G I +A ++F + +D+++WN++I+GY Q+G +++ +F M +N+ V++
Sbjct: 542 KRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIG 601
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEATRLFEQMP 170
+I C ++ YF +M + Y+ MI + + G LE+A + +MP
Sbjct: 602 VITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMP 659
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 295/527 (55%), Gaps = 13/527 (2%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
I+ALS G+I AA ++ + K + + A++TG + G + E++ LF+ +P +VSWN
Sbjct: 297 IAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWN 356
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
MI G + N +D+A + F MP RNT ++ MI+G+ ++GR EEA L + + R ++
Sbjct: 357 AMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLP 416
Query: 177 YTAMLD---------GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
+ L G ++ G + A+ F + V +I+ Y K R++
Sbjct: 417 SLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVC-NALISMYGKCRNMEYVRQV 475
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F RM K+ + I + MLE+AR +F+ + +D VS+ +I+ YAQ +E
Sbjct: 476 FNRM--RVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDE 533
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
A+ F M+ +P+ L + + C L G+Q H + I++G ++ + V NA+++
Sbjct: 534 AVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMS 593
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY +CG DS F + ++ +WNT I AQHG +A+ + M G P+ +T
Sbjct: 594 MYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVT 652
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
F+ LL+AC HAG V+E F+ M + YG+ P EHY C+VD+L R G ++ A + M
Sbjct: 653 FVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDM 712
Query: 468 PFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVT 527
P E DT +W +LL AC I+ N E+G AA+K+ +P N+ YVMLSN+Y++ GMW +V
Sbjct: 713 PIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVA 772
Query: 528 RVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
+R +MK++GV+K+ SW++I NKVH F+ GD H I++I L+
Sbjct: 773 ELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQ 819
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 234/477 (49%), Gaps = 58/477 (12%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
++A+I L+R G++ AR++FD M +D+I WN++I+ Y +G L++++ LF ++ N+
Sbjct: 36 HSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNV 95
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
+ +++G R+ DA F MPERNT +NAM+S ++++G + A RLF+ MP R
Sbjct: 96 RTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSR 155
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM- 231
+V S+ +M+ G+ ++ A L M +N+V+WTVMI+GYV+ E+ + ++F M
Sbjct: 156 DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMH 215
Query: 232 -----PDYDKNVFVVTAMITGFCKVGMLENAR-LLFERIQPKDCVSFNAMIAGYAQNGVA 285
PD N V + +TG +G+LE R L+ + D V +++ Y ++ A
Sbjct: 216 HEGASPD-QSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASA 274
Query: 286 EE-ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN- 343
+ A++ F GM++ + +T + + L+ G + + G + S+ +
Sbjct: 275 LDIAIKFFDGMVERNE----------YTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQ 324
Query: 344 -AVITMYSRCGGILDSELAFRQIHSPNLVSWNT--------------------------- 375
A++T +RCG I ++ + F QI P +VSWN
Sbjct: 325 TALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTI 384
Query: 376 ----IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+IA +AQ+G E+AL + NG P + S AC H G + + L
Sbjct: 385 SWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLA 444
Query: 432 VKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
VK S Y C L+ + + +E Q+ M + DT W S +AA V N
Sbjct: 445 VKAGCQFNS---YVCNALISMYGKCRNMEYVRQVFNRMRVK-DTVSWNSFIAALVQN 497
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 181/377 (48%), Gaps = 44/377 (11%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+ + ++A I + GRL EA +F+ MP R++I++ +M+ + G ++ AR L D +S
Sbjct: 32 DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
NV + T++++GY + R +AR +F MP ++N AM++ + + G + AR LF
Sbjct: 92 GGNVRTATILLSGYARLGRVLDARRVFDGMP--ERNTVAWNAMVSCYVQNGDITMARRLF 149
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLF---------------SGMIKMDMQ----- 301
+ + +D S+N+M+ GY + +A LF SG ++++
Sbjct: 150 DAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWD 209
Query: 302 -----------PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
PD + SV +A + LQ L LV++ GFE++V + +++ +Y+
Sbjct: 210 IFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYT 269
Query: 351 RCGGILDSELA-FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
R LD + F + N +W+T+IAA + G + A+ + + + P L
Sbjct: 270 RDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALL 328
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
+ L+ C G++ E+ LFE + P + ++ + G +++A ++ MPF
Sbjct: 329 TGLARC---GRITEARILFEQIPD-----PIVVSWNAMITGYMQNGMVDEAKELFDRMPF 380
Query: 470 EADTGVWGSLLAACVIN 486
+T W ++A N
Sbjct: 381 R-NTISWAGMIAGYAQN 396
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 127/291 (43%), Gaps = 19/291 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+V NA IS + + RQ+F++M KD ++WN+ I QN L++++++F +M +
Sbjct: 454 YVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSR 513
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATYNAMISGFLKHGRLEEA-- 162
++VSW +I+ +R D+A ++F+ M P T + G L +L +
Sbjct: 514 DVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIH 573
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
T + +I A++ + K G D + D M +++ +W ITG ++
Sbjct: 574 TVAIKHGMDSELIVANALMSMYFKCGCADSHKVF-DSMEERDIFTWNTFITGCAQHGLGR 632
Query: 223 EARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----FNAM 275
EA +++ M N ++ G+++ F+ + ++ + M
Sbjct: 633 EAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACM 692
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+ + G + A + + M ++PD ++ AC + GR++
Sbjct: 693 VDLLGRTGDVQGAEKF---IYDMPIEPDTVIWSALLGACKIHKNAEIGRRA 740
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 300/542 (55%), Gaps = 47/542 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D + NA++ Y + G ++ + +FQ + ++VSWN +IAGC+ +D D A M
Sbjct: 217 DQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMK 276
Query: 140 ERNTATYNAMIS---------GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
T +S GF + GR + + L + ++ + ++D + K +
Sbjct: 277 GSGTRPNMFTLSSALKACAAMGFKELGR-QLHSSLIKMDAHSDLFAAVGLVDMYSKCEMM 335
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKN----------- 237
D AR D M K++++W +I+GY + +A LF +M D D N
Sbjct: 336 DDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSV 395
Query: 238 ------------------------VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+V+ +++ + K ++ A +FE +D V++
Sbjct: 396 ASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYT 455
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+MI Y+Q G EEAL+L+ M D++PD S+ AC+ L +G+Q HV I+
Sbjct: 456 SMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKF 515
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GF ++ N+++ MY++CG I D++ AF +I + +VSW+ +I +AQHGH ++AL F
Sbjct: 516 GFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLF 575
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+QM +G P+ IT +S+L AC HAG VNE FE M ++GI P+ EHY C++D+L R
Sbjct: 576 NQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGR 635
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
+G+L +A ++ +PFEAD VWG+LL A I+ N+ELG+ AAK + +L+P+ S +V+L
Sbjct: 636 SGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLL 695
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
+N+YA+AGMW +V +VR MK+ V K+ SWIEI +KV+ F+ GD SH D+I+ +L
Sbjct: 696 ANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKL 755
Query: 574 KR 575
+
Sbjct: 756 DQ 757
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/543 (22%), Positives = 241/543 (44%), Gaps = 116/543 (21%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LI+ ++ + N ++ S+ + AR+L D+ + DV++W+++++GY QNGF++E+
Sbjct: 7 LIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEA 66
Query: 101 KNLFQSM---PVK-NIVSWNCMIAGC--------------------IDNDR--------- 127
+F M VK N ++ ++ C ++D
Sbjct: 67 LLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVM 126
Query: 128 ------IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI------ 175
+DD+ F + ERN ++NA+ S +++ EA LF++M R ++
Sbjct: 127 YAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSI 186
Query: 176 ---------------------------------SYTAMLDGFMKKGEVDKARALSDYMSF 202
S A++D + K GE++ A A+ ++
Sbjct: 187 SIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAH 246
Query: 203 KNVVSWTVMITGYVKNE----------------------------RFCEA---RELFYRM 231
+VVSW +I G V ++ + C A +EL ++
Sbjct: 247 PDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQL 306
Query: 232 P------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
D ++F ++ + K M+++AR ++ + KD +++NA+I+GY+Q G
Sbjct: 307 HSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDH 366
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+A+ LFS M D+ + TL +V + ++LQ + +Q H + I++G ++ V N++
Sbjct: 367 LDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSL 426
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ Y +C I ++ F + +LV++ ++I A++Q+G E+AL + QM PD
Sbjct: 427 LDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDP 486
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
SLL+AC + + L +K +G + LV++ ++ G +E A +
Sbjct: 487 FICSSLLNACANLSAYEQGKQLHVHAIK-FGFMCDIFASNSLVNMYAKCGSIEDADRAFS 545
Query: 466 GMP 468
+P
Sbjct: 546 EIP 548
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 175/350 (50%), Gaps = 12/350 (3%)
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
R+ + N +++ + K R A +L ++ +V+S++++L G+++ G V++A + + M
Sbjct: 14 RDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEM 73
Query: 201 SFKNVVSWTVMITGYVKN---ERFCEARELFYRMP---DYDKNVFVVTAMITGFCKVGML 254
V +K +R + M ++ + FV ++ + K G+L
Sbjct: 74 CLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLL 133
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+++R LF I ++ VS+NA+ + Y Q+ + EA+ LF M++ + P++ ++ + AC
Sbjct: 134 DDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNAC 193
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ LQ + GR+ H L+++ G + + NA++ MYS+ G I + F+ I P++VSWN
Sbjct: 194 AGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWN 253
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
IIA H + AL+ +M +G P+ T S L AC G L ++K
Sbjct: 254 AIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIK- 312
Query: 435 YGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ S+ + LVD+ S+ ++ A + MP + D W +L++
Sbjct: 313 --MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWNALISG 359
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 156/310 (50%), Gaps = 28/310 (9%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
HSS LI++ + +F + S+ + AR+ +D M KD+I WNA+I+GY Q G
Sbjct: 307 HSS--LIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCG 364
Query: 96 FLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT--------YN 147
++ +LF M ++I ++ + + A + + + + N
Sbjct: 365 DHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVIN 424
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN--- 204
+++ + K ++EA+++FE+ ++++YT+M+ + + G D AL Y+ ++
Sbjct: 425 SLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYG--DGEEALKLYLQMQDADI 482
Query: 205 ---------VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
+++ ++ Y + ++ F M D +F +++ + K G +E
Sbjct: 483 KPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCD----IFASNSLVNMYAKCGSIE 538
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A F I + VS++AMI GYAQ+G +EALRLF+ M++ + P+ TLVSV AC+
Sbjct: 539 DADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACN 598
Query: 316 ALQLLNEGRQ 325
L+NEG+Q
Sbjct: 599 HAGLVNEGKQ 608
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 194/451 (43%), Gaps = 49/451 (10%)
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
++D N ++T Y + ++ L ++VSW+ +++G + N +++A F
Sbjct: 13 SRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNE 72
Query: 138 M----PERNTATYNAMISGF-----LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
M + N T+ +++ L GR + ++ T ++ + K G
Sbjct: 73 MCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVV-MYAKCG 131
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR------MPD--------- 233
+D +R L + +NVVSW + + YV++E EA LF MP+
Sbjct: 132 LLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILN 191
Query: 234 ----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
D + F A++ + K G +E A +F+ I D VS
Sbjct: 192 ACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVS 251
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+NA+IAG + + AL L M +P+ TL S AC+A+ GRQ H +I
Sbjct: 252 WNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLI 311
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ +++ ++ MYS+C + D+ A+ + ++++WN +I+ ++Q G + A+
Sbjct: 312 KMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVS 371
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
FS+M D + T ++L + + + + +K GI L+D
Sbjct: 372 LFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKS-GIYSDFYVINSLLDTY 430
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ +++A +I + +E D + S++ A
Sbjct: 431 GKCNHIDEASKIFEERTWE-DLVAYTSMITA 460
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H +I+ GF + S+ N ++T+YS+C + + ++VSW+++++ + Q+G
Sbjct: 4 HAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFV 63
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
E+AL+ F++M L G + TF S+L AC +N + + V V G
Sbjct: 64 EEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAV-VTGFESDGFVANT 122
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
LV + ++ G L+ + ++ G+ E + W +L + V
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGI-VERNVVSWNALFSCYV 159
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 25 STPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRAGKISAARQLFDQMTTK 79
S ++C N + + + + + ++ +F +N+ ++ ++ G I A + F ++ +
Sbjct: 491 SLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNR 550
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYF 135
+++W+A+I GY Q+G +E+ LF M N ++ ++ C +++ YF
Sbjct: 551 GIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYF 610
Query: 136 QAMP-----ERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+ M + Y MI + G+L EA L +P
Sbjct: 611 EKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIP 650
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 311/546 (56%), Gaps = 14/546 (2%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V NA IS ++ G + AR++FD M ++D ++W + Y ++G+ QES + +M +
Sbjct: 182 VGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEG 241
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEAT 163
+ +++ +++ C ++ + E + A+ ++K G +++A
Sbjct: 242 VRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAR 301
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNE 219
+FE +P R+VI++ M+ G + G++++A + M + V V++ +++ +
Sbjct: 302 EVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPG 361
Query: 220 RFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+E+ R +V A+I + K G +++AR +F+R+ +D VS+ A++
Sbjct: 362 GLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVG 421
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GYA G E+ F M++ ++ + T + V ACS L G++ H V++ G A
Sbjct: 422 GYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFA 481
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+++V NA+++MY +CG + D+ + + ++V+WNT+I AQ+G +AL F M
Sbjct: 482 DLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMK 541
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
P+ TF++++SAC V E F M K YGI+P+ +HY C+VDIL+RAG L
Sbjct: 542 SEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHL 601
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
+A + MPF+ +WG+LLAAC + NVE+GE AA++ +L+PQN+ YV LS +Y
Sbjct: 602 GEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIY 661
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
AAAGMWRDV ++R LMKE+GV K+ SWIE+ +VH F+ GD SHP ++I+ EL+ +
Sbjct: 662 AAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALT 721
Query: 578 VQMKSV 583
Q+KS+
Sbjct: 722 KQIKSL 727
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 225/466 (48%), Gaps = 28/466 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R V++ N + G ++ AR+LFD+ + K V++WN +I+GY G QE+
Sbjct: 70 ILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEA 129
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISG 152
NLF M + + ++ +++ C ++ + +A N NA+IS
Sbjct: 130 FNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISM 189
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY------------M 200
+ K G + +A R+F+ M R+ +S+T + + + G + +L Y +
Sbjct: 190 YAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQE--SLKTYHAMLQEGVRPSRI 247
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
++ NV+S + K ++ ++ +V V TA+ + K G +++AR +
Sbjct: 248 TYMNVLSACGSLAALEKGKQI----HAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
FE + +D +++N MI G +G EEA +F M+K + PD T +++ +AC+ L
Sbjct: 304 FECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGL 363
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
G++ H +++G ++V NA+I MYS+ G + D+ F ++ ++VSW ++ +
Sbjct: 364 ACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGY 423
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A G ++ F +M G + + IT++ +L AC + + ++ +VK GI
Sbjct: 424 ADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKA-GIFAD 482
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
L+ + + G +E A ++++GM D W +L+ N
Sbjct: 483 LAVANALMSMYFKCGSVEDAIRVSEGMSTR-DVVTWNTLIGGLAQN 527
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 144/260 (55%), Gaps = 14/260 (5%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
NV+++ ++ + G + AR LF++ K VS+N MI+GYA G+ +EA LF+ M
Sbjct: 78 NVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQ 137
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ ++PD T VS+ +ACS+ LN GR+ HV V+ G N +V NA+I+MY++CG +
Sbjct: 138 QEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVR 197
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F + S + VSW T+ A+A+ G+ +++L + M G P IT++++LSACG
Sbjct: 198 DARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACG 257
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHY------TCLVDILSRAGQLEKAWQITQGMPFE 470
S+ E +++ I SEH+ T L + + G ++ A ++ + +P
Sbjct: 258 -------SLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP-N 309
Query: 471 ADTGVWGSLLAACVINLNVE 490
D W +++ V + +E
Sbjct: 310 RDVIAWNTMIGGLVDSGQLE 329
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
Q D V + +C + L G+Q H ++R G + NV + N ++ +Y CG + ++
Sbjct: 41 QVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARR 100
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + + ++VSWN +I+ +A G ++A F+ M G +PD TF+S+LSAC
Sbjct: 101 LFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAA 160
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+N ++ + V G+ ++ L+ + ++ G + A ++ M D W +L
Sbjct: 161 LNWGREV-HVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR-DEVSWTTLT 218
Query: 481 AA 482
A
Sbjct: 219 GA 220
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 192/616 (31%), Positives = 315/616 (51%), Gaps = 88/616 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV N + ++ + +++LFD++ ++V++WNA+ + Y Q F E+ LF M +
Sbjct: 192 VFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVL 251
Query: 110 KNI----VSWNCMIAGCI---DNDR--------------------------------IDD 130
I S + M+ C D+ R + D
Sbjct: 252 SGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLAD 311
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR------------NVISYT 178
A F+ + + + ++NA+I+G + H E+A L QM R+ ++
Sbjct: 312 AISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSV 371
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------- 231
++D + K ++ AR + + K++++W +I+GY + EA LF M
Sbjct: 372 GLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGF 431
Query: 232 ------------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLF 261
+ +++VV ++I + K +E+A +F
Sbjct: 432 NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIF 491
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
E D VSF +MI YAQ G EEAL+LF M M+++PD S+ AC+ L
Sbjct: 492 EECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFE 551
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
+G+Q HV +++ GF ++ N+++ MY++CG I D+ AF ++ +VSW+ +I A
Sbjct: 552 QGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLA 611
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
QHGH +AL F+QM G P+ IT +S+L AC HAG V E+ FE M +++G P
Sbjct: 612 QHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQ 671
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
EHY C++D+L RAG++ +A ++ MPFEA+ VWG+LL A I+ +VELG AA+ +
Sbjct: 672 EHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFI 731
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
L+P+ S +V+L+N+YA+AG W +V VR LM++ V K+ SWIE+ +KV+ FL GD
Sbjct: 732 LEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDR 791
Query: 562 SHPCIDKIHLELKRAS 577
SH +I+ +L S
Sbjct: 792 SHYRSQEIYAKLDELS 807
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 228/497 (45%), Gaps = 89/497 (17%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK- 110
+ N I+ S+ AR+L D+ + D+++W+A+I+GY QNG + F M +
Sbjct: 93 IRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLG 152
Query: 111 ---NIVSWNCMIAGC--IDNDRID---------------------------------DAF 132
N +++ ++ C + + RI D+
Sbjct: 153 VKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSK 212
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM----------------------- 169
F +PERN ++NA+ S +++ EA LF +M
Sbjct: 213 RLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLR 272
Query: 170 --PRRNVI--------------SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
R +I S A++D + K G++ A ++ + + ++VSW +I
Sbjct: 273 DSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIA 332
Query: 214 GYVKNERFCEARELFYRMP----------DYDKNVFVVTAMITGFCKVGMLENARLLFER 263
G V +E +A EL +M D + ++FV ++ + K +LE+AR+ F
Sbjct: 333 GCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNL 392
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ KD +++NA+I+GY+Q EAL LF M K + + TL ++ + + LQ+++
Sbjct: 393 LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVC 452
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
RQ H L +++GF +++ V N++I Y +C + D+E F + +LVS+ ++I A+AQ+
Sbjct: 453 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY 512
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G E+AL F +M PD SLL+AC + + L ++K YG +
Sbjct: 513 GQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK-YGFVLDIFA 571
Query: 444 YTCLVDILSRAGQLEKA 460
LV++ ++ G ++ A
Sbjct: 572 GNSLVNMYAKCGSIDDA 588
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 155/292 (53%), Gaps = 8/292 (2%)
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+I + K AR L + D VS++A+I+GYAQNG+ AL F M + ++ +
Sbjct: 97 LINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCN 156
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
+ T SV ACS ++ L G+Q H +V+ +GFE +V V N ++ MY++C LDS+ F
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+I N+VSWN + + + Q +A+ F +M L+G P+ + S+++AC +
Sbjct: 217 EIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 424 SMDLFELMVKV-YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ ++K+ Y P S LVD+ ++ G L A + + + + D W +++A
Sbjct: 277 GKIIHGYLIKLGYDWDPFSA--NALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAG 333
Query: 483 CVINLNVELG-ELAAKKMRELDPQNSAVYV-MLSNLYAAAGMWRDVTRVRLL 532
CV++ + E EL + R+L +S + + M S+L+ + G+ ++ LL
Sbjct: 334 CVLHEHHEQALELLGQMKRQL--HSSLMKMDMESDLFVSVGLVDMYSKCDLL 383
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 170/372 (45%), Gaps = 26/372 (6%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
HSS L+++ +FV+ + S+ + AR F+ + KD+I WNAII+GY Q
Sbjct: 355 HSS--LMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYW 412
Query: 96 FLQESKNLFQSMPVKNIVSWNCMIAGCIDND---RIDDAFDYFQAMPER-----NTATYN 147
E+ +LF M + I ++ + + ++ + + + N
Sbjct: 413 EDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 472
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----SDYMSFK 203
++I + K +E+A R+FE+ +++S+T+M+ + + G+ ++A L D
Sbjct: 473 SLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKP 532
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLF 261
+ + ++ F + ++L + Y ++F +++ + K G +++A F
Sbjct: 533 DRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAF 592
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ + VS++AMI G AQ+G +AL+LF+ M+K + P+ TLVSV AC+ L+
Sbjct: 593 SELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVT 652
Query: 322 EGRQSHVLVIRN-----GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNT 375
E + L + GF+ +I + R G I ++ EL + N W
Sbjct: 653 EAK----LYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGA 708
Query: 376 IIAAFAQHGHYE 387
++ A H E
Sbjct: 709 LLGAARIHKDVE 720
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
K + P + + + C + L G Q H + ++G + S+ N +I +YS+C
Sbjct: 49 KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFG 108
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ + P+LVSW+ +I+ +AQ+G AL+ F +M L G + TF S+L AC
Sbjct: 109 YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKAC 167
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 17/192 (8%)
Query: 25 STPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRAGKISAARQLFDQMTTK 79
S ++C N + + + +Y +F N+ ++ ++ G I A + F ++T +
Sbjct: 539 SLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTER 598
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN-----CMIAGCIDNDRIDDAFDY 134
+++W+A+I G Q+G +++ LF M +K VS N ++ C + +A Y
Sbjct: 599 GIVSWSAMIGGLAQHGHGRQALQLFNQM-LKEGVSPNHITLVSVLGACNHAGLVTEAKLY 657
Query: 135 FQAMPE-----RNTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKG 188
F++M E Y MI + G++ EA L +MP N + A+L
Sbjct: 658 FESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHK 717
Query: 189 EVDKARALSDYM 200
+V+ R ++ +
Sbjct: 718 DVELGRRAAEML 729
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 310/599 (51%), Gaps = 78/599 (13%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N ++A +AG+ + AR++FD ++ T+NA+++ L + +LF SM ++ V
Sbjct: 45 NHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTV 104
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAM--------PER------------------------ 141
S+N +IAG A + + P R
Sbjct: 105 SYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHC 164
Query: 142 ---------NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
N + ++ + K G + +A R+F++M +NV+ Y M+ G ++ V++
Sbjct: 165 QILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEE 224
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--------------------- 231
AR L + M+ ++ ++WT M+TG+ +N +A F RM
Sbjct: 225 ARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGA 284
Query: 232 ----------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
YD NVFV +A++ + K ++ A F R+ K+ +S+ A+
Sbjct: 285 LSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTAL 344
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I GY QNG +EEA+R+FS M + + PDD TL SV ++C+ L L EG Q H L + +G
Sbjct: 345 IVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGL 404
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++V NA++T+Y +CG I D+ F ++ + VSW ++ +AQ G ++ + F +
Sbjct: 405 MHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEK 464
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M PDG+TF+ +LSAC AG V + F M K +GI+P +HYTC++D+ SR+G
Sbjct: 465 MLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSG 524
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L++A + + MP D WG+LL+AC + ++E+G+ AA+ + E+DPQN A YV+L +
Sbjct: 525 RLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCS 584
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
++A G W V ++R M+++ V K+ SWI+ NKVH F D SHP I+ +L+
Sbjct: 585 MHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLE 643
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 180/410 (43%), Gaps = 72/410 (17%)
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
T N +++ + K GR A R+F+ P N+ +Y A+L +D +L M+
Sbjct: 41 THLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQ 100
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM--------PD--------------------- 233
++ VS+ +I G+ A L++ + P
Sbjct: 101 RDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGR 160
Query: 234 ----------YDKNVFVVTAMITGFCKVGML----------------------------- 254
+ N FV + ++ + K+G++
Sbjct: 161 QFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCK 220
Query: 255 --ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
E AR LFE + +DC+++ M+ G+ QNG+ +AL F M + D T S+ T
Sbjct: 221 MVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILT 280
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
AC AL L +G+Q H +IR ++ NV V +A++ MYS+C I +E AFR++ N++S
Sbjct: 281 ACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIIS 340
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
W +I + Q+G E+A+ FS+M +G DPD T S++S+C + + E F +
Sbjct: 341 WTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQ-FHCLA 399
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
V G++ LV + + G +E A ++ M F D W +L+
Sbjct: 400 LVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFH-DQVSWTALVTG 448
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 184/394 (46%), Gaps = 47/394 (11%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++RL FV + + ++ G I A+++FD+M K+V+ +N +ITG + ++E+
Sbjct: 166 ILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEA 225
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKH 156
+ LF+ M ++ ++W M+ G N A ++F+ M + A T+ ++++
Sbjct: 226 RRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGAL 285
Query: 157 GRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
LE+ ++ + R NV +A++D + K + A MS KN++SWT +I
Sbjct: 286 SALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALI 345
Query: 213 TGYVKNERFCEARELFYRM------PD-------------------------------YD 235
GY +N EA +F M PD
Sbjct: 346 VGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLM 405
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ V A++T + K G +E+A LF+ + D VS+ A++ GYAQ G A+E + LF M
Sbjct: 406 HYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKM 465
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ D++PD T + V +ACS + +G H + +G +I +YSR G
Sbjct: 466 LAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGR 525
Query: 355 ILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYE 387
+ ++E +Q+ P+ + W T+++A G E
Sbjct: 526 LKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDME 559
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 189/569 (33%), Positives = 310/569 (54%), Gaps = 53/569 (9%)
Query: 57 ISALSRAGKISAARQLFDQMT----TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+SA S G + +Q + D+I A++ Y + ++ + F S +N+
Sbjct: 379 LSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENV 438
Query: 113 VSWNCMIA--GCIDNDRIDDAFDYFQAMP----ERNTATYNAMIS--GFLKHGRLEEA-- 162
V WN M+ G +DN ++++F F M E N TY +++ L+ L E
Sbjct: 439 VLWNVMLVAYGLLDN--LNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIH 496
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
T++ + + NV + ++D + K G++D A + + K+VVSWT MI GY ++E+F
Sbjct: 497 TQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFA 556
Query: 223 EARELFYRMPD-------------------------------------YDKNVFVVTAMI 245
EA LF M D Y ++ V A++
Sbjct: 557 EALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALV 616
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ + + G + +A F++I KD +S+N++I+G+AQ+G EEAL LFS M K + +
Sbjct: 617 SLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSF 676
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T +A + + + G+Q H ++I+ G ++ V N +IT+Y++CG I D+E F ++
Sbjct: 677 TFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEM 736
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
N +SWN ++ ++QHGH KAL F M G P+ +TF+ +LSAC H G V+E +
Sbjct: 737 PEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGI 796
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
F+ M +V+G++P EHY C+VD+L R+G L +A + + MP + D V +LL+AC++
Sbjct: 797 KYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIV 856
Query: 486 NLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYS 545
+ N+++GE AA + EL+P++SA YV+LSN+YA G W R R +MK++GV K+ S
Sbjct: 857 HKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRS 916
Query: 546 WIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
WIE+ N VH F GD HP +DKI+ L+
Sbjct: 917 WIEVNNSVHAFFAGDQKHPNVDKIYEYLR 945
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 216/490 (44%), Gaps = 80/490 (16%)
Query: 130 DAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAML 181
+ ++ M ER N+ TY ++ G L G + +L ++ + V+ ++
Sbjct: 51 NGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLM 110
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD-- 233
D ++ G++D A + D M + + W ++ +V + LF RM PD
Sbjct: 111 DLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDER 170
Query: 234 ------------------------------YDKNVFVVTAMITGFCKVGMLENARLLFER 263
Y+ ++FV +I + K G L +A+ +F+
Sbjct: 171 TYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDG 230
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+Q +D VS+ AM++G +Q+G EEA+ LF M + P SV +AC+ ++ G
Sbjct: 231 LQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVG 290
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
Q H LV++ GF VCNA++T+YSR G + +E F + + VS+N++I+ +Q
Sbjct: 291 EQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQ 350
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG-------------KVNESMD---- 426
G+ +KAL F +M L+ PD +T SLLSAC G K S D
Sbjct: 351 GYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILE 410
Query: 427 --LFELMVKVYGIIPSSEHY-------TCLVDILSRA----GQLEKAWQITQGMPFEA-- 471
L +L VK I + E + L +++ A L ++++I M E
Sbjct: 411 GALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIE 470
Query: 472 -DTGVWGSLLAACVINLNVELGELAAKKMRELDPQ-NSAVYVMLSNLYAAAGMWRDVTRV 529
+ + S+L C V+LGE ++ + Q N V +L ++YA G ++
Sbjct: 471 PNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKI 530
Query: 530 RLLMKEQGVT 539
+KE+ V
Sbjct: 531 FRRLKEKDVV 540
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 210/447 (46%), Gaps = 16/447 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV N I + G +++A+++FD + +D ++W A+++G Q+G +E+ LF M
Sbjct: 205 LFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHT 264
Query: 110 KNIVS----WNCMIAGC--IDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEE 161
+ ++ +++ C ++ ++ + + TY NA+++ + + G
Sbjct: 265 SGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIP 324
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
A ++F M +R+ +SY +++ G ++G DKA L M + V + +
Sbjct: 325 AEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSS 384
Query: 222 CEARELFYRMPDY------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
A + + Y ++ + A++ + K ++ A F + ++ V +N M
Sbjct: 385 VGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVM 444
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
+ Y E+ ++F+ M ++P+ T S+ CS+L+ ++ G Q H V++ GF
Sbjct: 445 LVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGF 504
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ NV V + +I MY++ G + + FR++ ++VSW +IA +AQH + +AL F +
Sbjct: 505 QFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKE 564
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G D I F S +SAC +N+ + V G LV + +R G
Sbjct: 565 MQDQGIHSDNIGFASAISACAGIQALNQGQQI-HAQACVSGYSDDLSVGNALVSLYARCG 623
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
++ A+ + F D W SL++
Sbjct: 624 KVRDAYFAFDKI-FSKDNISWNSLISG 649
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 207/437 (47%), Gaps = 23/437 (5%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV----SWNCMI 119
G + A +FD+M + + WN ++ + LF+ M + + ++ ++
Sbjct: 117 GDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVL 176
Query: 120 AGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
GC D + A E + N +I + K+G L A ++F+ + +R+
Sbjct: 177 RGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDS 236
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS----WTVMITGYVKNERFCEAREL--F 228
+S+ AML G + G ++A L M V ++ +++ K E + +L
Sbjct: 237 VSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGL 296
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+ +V A++T + ++G A +F + +D VS+N++I+G +Q G +++A
Sbjct: 297 VLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKA 356
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
L LF M ++PD T+ S+ +ACS++ L G+Q H I+ G +++ + A++ +
Sbjct: 357 LELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDL 416
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y +C I + F + N+V WN ++ A+ + ++ F+QM + G +P+ T+
Sbjct: 417 YVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTY 476
Query: 409 LSLLSACGHAGKVNESMDLFELMVKV---YGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
S+L C V+ + ++K + + SS L+D+ ++ G+L+ A +I +
Sbjct: 477 PSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSS----VLIDMYAKLGKLDHALKIFR 532
Query: 466 GMPFEADTGVWGSLLAA 482
+ E D W +++A
Sbjct: 533 RLK-EKDVVSWTAMIAG 548
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 84/209 (40%), Gaps = 1/209 (0%)
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
A+ Y+ + + M + ++ + T + + C + ++G + H +++
Sbjct: 38 ALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKM 97
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GF A V +C ++ +Y G + + F ++ L WN ++ F + L F
Sbjct: 98 GFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLF 157
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M PD T+ +L CG ++ +G S L+D+ +
Sbjct: 158 RRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFK 217
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G L A ++ G+ + D+ W ++L+
Sbjct: 218 NGFLNSAKKVFDGLQ-KRDSVSWVAMLSG 245
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 167/420 (39%), Positives = 261/420 (62%), Gaps = 2/420 (0%)
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
RLF+ M R+V+S+ +M+ G +K GE+ +A L D M K+ VSW ++ GYVK +
Sbjct: 2 RLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNK 61
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
A LF MP+ +NV + M++G+CK G +E AR+LF+R+ K+ VS+ +++GYA G
Sbjct: 62 AFGLFESMPE--RNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKG 119
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+A++A+R F M + ++PDD T++S+ +C+ LL G++ H + R ++ +V+V N
Sbjct: 120 LAKDAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSN 179
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
A++ MY++CG + + F + +LVSWN ++ A HGH EKAL FS M GF P
Sbjct: 180 ALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRP 239
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
D +T +++L AC HAG V+E + F M + YGI+P EHY C+VD+L R G+L++A+++
Sbjct: 240 DKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRL 299
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW 523
Q MP E + +WG+LL AC ++ V L E + +L+P + Y +LSN++A+AG W
Sbjct: 300 VQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDW 359
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
V VRL MK G+ K S IE+ ++VH F D SHP DKI+ + R + +K V
Sbjct: 360 SSVANVRLQMKNFGIQKPSGASSIEVDDEVHEFTVFDKSHPKSDKIYQMINRLGLDLKRV 419
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 186/358 (51%), Gaps = 27/358 (7%)
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDD 130
+LF M +DV++WN++I G + G L E+ LF MP+K+ VSWN ++ G + ++
Sbjct: 2 RLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNK 61
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG-- 188
AF F++MPERN +++ M+SG+ K G +E A LF++MP +N++S+T ++ G+ KG
Sbjct: 62 AFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLA 121
Query: 189 --------EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
++++A D + ++++ +R + E Y +V V
Sbjct: 122 KDAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIERIR----YKCSVNV 177
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
A++ + K G ++ A +F + KD VS+N M+ G A +G E+AL+LFS M +
Sbjct: 178 SNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGF 237
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSE 359
+PD TLV+V AC ++EG + + R+ G ++ ++ + R G + +
Sbjct: 238 RPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKE-- 295
Query: 360 LAFRQIHS----PNLVSWNTIIAAFAQH---GHYEKALIFFSQMGLNGFDPDGITFLS 410
A+R + S PN+V W T++ A H G E+ L + L DP + LS
Sbjct: 296 -AYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFK--LEPSDPGNYSLLS 350
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 59/325 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L ++ + V N+ I L + G++S A +LFD+M KD ++WN I+ GY + G + ++
Sbjct: 3 LFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKA 62
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
LF+SMP +N+VSW+ M++G ++ A F MP +N ++ ++SG+ G +
Sbjct: 63 FGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAK 122
Query: 161 EATRLFEQMPRRNV--------------------------------ISY-------TAML 181
+A R FEQM + I Y A++
Sbjct: 123 DAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALV 182
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYD 235
D + K G+VD+A ++ + MS K++VSW M+ G + +A +LF M PD
Sbjct: 183 DMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKV 242
Query: 236 KNVFVVTAMI-TGFCKVGM-----LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
V V+ A + GF G+ +E + I+ C M+ + G +EA
Sbjct: 243 TLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGC-----MVDLLGRGGRLKEAY 297
Query: 290 RLFSGMIKMDMQPDDATLVSVFTAC 314
RL M ++P+ ++ AC
Sbjct: 298 RLVQ---SMPVEPNVVIWGTLLGAC 319
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 265/441 (60%), Gaps = 6/441 (1%)
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
F +P+ N A +N+M G+ + E +F +M RNV+++T+M++G++ ++ AR
Sbjct: 8 FDQIPDPNIALWNSMFRGYAQS---ESYREIFCEMFERNVVAWTSMINGYILSADLVSAR 64
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
L D ++VV W +M++GY++ EAR+LF+ MP+ D V ++ G+ G +
Sbjct: 65 RLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRD--VMFWNTVLKGYATNGNV 122
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTA 313
E LFE + ++ S+NA+I GYA NG+ E L F M+ + D+ P+DATLV+V +A
Sbjct: 123 EALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSA 182
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C+ L L+ G+ HV +G + NV V NA++ MY++CG I ++ FR + + +L+SW
Sbjct: 183 CARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISW 242
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
NT+I A H AL F QM G PDGITF+ +L AC H G V + F+ M
Sbjct: 243 NTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMAD 302
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
Y I+P EHY C+VD+L+RAG+LE+A + MP EAD +W LL AC I NVEL E
Sbjct: 303 DYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAE 362
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
LA +++ EL+P+N A YVMLSN+Y AG W DV R+++ M++ G K S IE+ + V
Sbjct: 363 LALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAV 422
Query: 554 HYFLGGDMSHPCIDKIHLELK 574
F D HP I++I+ L+
Sbjct: 423 VEFYSLDERHPQIEEIYGVLR 443
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 223/491 (45%), Gaps = 86/491 (17%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN 125
++ ARQLFDQ+ ++ WN++ GY Q+ + + +F M +N+V+W MI G I +
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGYAQS---ESYREIFCEMFERNVVAWTSMINGYILS 57
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
+ A F PER+ +N M+SG+++ G + EA +LF +MP R+V+ + +L G+
Sbjct: 58 ADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYA 117
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDK--- 236
G V+ L + M +N+ SW +I GY N F E F RM P D
Sbjct: 118 TNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLV 177
Query: 237 -----------------------------NVFVVTAMITGFCKVGMLENARLLFERIQPK 267
NV+V A++ + K G++ENA +F + K
Sbjct: 178 TVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTK 237
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D +S+N +I G A + +AL LF M +PD T + + AC +H
Sbjct: 238 DLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCAC-----------TH 286
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ ++ +GF S+ + + M P + + ++ A+ G E
Sbjct: 287 MGLVEDGFAYFQSMADDYLIM-------------------PQIEHYGCMVDMLARAGRLE 327
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIPSSE-HYT 445
+A+ F +M + + DG+ + LL AC ++ ++++L EL + ++ + P + +Y
Sbjct: 328 QAMAFVRKMPV---EADGVIWAGLLGAC----RIYKNVELAELALQRLIELEPKNPANYV 380
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
L +I AG+ E ++ M DTG + L +I +N + E + + E PQ
Sbjct: 381 MLSNIYGDAGRWEDVARLKVAM---RDTG-FKKLPGCSLIEVNDAVVEFYS--LDERHPQ 434
Query: 506 NSAVYVMLSNL 516
+Y +L L
Sbjct: 435 IEEIYGVLRGL 445
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 19/294 (6%)
Query: 37 SSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
S+ L L + V + N +S G + AR+LF +M +DV+ WN ++ GY NG
Sbjct: 62 SARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGN 121
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
++ + LF+ MP +NI SWN +I G N + F+ M N AT ++S
Sbjct: 122 VEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLS 181
Query: 152 GFLKHGRLE--EATRLFEQMP--RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
+ G L+ + ++ + + NV A++D + K G ++ A ++ M K+++S
Sbjct: 182 ACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLIS 241
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQ 265
W +I G + R +A LF++M + + +T ++ +G++E+ F+ +
Sbjct: 242 WNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMA 301
Query: 266 PKDCV-----SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ + M+ A+ G E+A+ KM ++ D + AC
Sbjct: 302 DDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVR---KMPVEADGVIWAGLLGAC 352
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 299/524 (57%), Gaps = 21/524 (4%)
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNCMIAGCIDNDRIDDAF 132
+ ++++W+A+I G+ QNG+ +E+ L M N + ++ C ++
Sbjct: 7 SKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGK 66
Query: 133 DYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ + N N ++ + + + A ++F +NV+SY M+ G+ + G
Sbjct: 67 EIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENG 126
Query: 189 EVDKARALSDYMSF--KNVVSWTVMITGYVKNERFCE----ARELFYRMPDYDKNVFVVT 242
V+KA+ L D M K+ +SW MI+GY N CE A+ F + + D + V
Sbjct: 127 NVEKAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWNV- 185
Query: 243 AMITGFCKVGMLENARLLFERIQ----PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
+I+G+ LEN + L ++++ + ++N +I+G+ +NG E ALRLF+ M
Sbjct: 186 -LISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTS 244
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++PD T+ + AC+ L + G+Q H IR G+E +V + A++ MY++CG I +
Sbjct: 245 SLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHA 304
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+ +I +PNLVS N ++ A+A HGH ++ + F M NGF PD +TFLS+LS+C HA
Sbjct: 305 MQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHA 364
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V + F+LM Y + PS +HYTC+VD+LSRAG+L++A+++ + +P + D+ +WG+
Sbjct: 365 GAVETGHEFFDLMT-YYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGA 423
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL CVI NVELGE+AA+ + EL+P N+ YV+L+NLYA AG W D+ R R ++K++G+
Sbjct: 424 LLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGM 483
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
K SWIE +H FL D SH + I+ L + M++
Sbjct: 484 HKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLNTHMRT 527
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 195/408 (47%), Gaps = 21/408 (5%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV- 109
FV N + R + +A ++F + K+V+++N +I GY +NG ++++K LF M +
Sbjct: 82 FVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELV 141
Query: 110 -KNIVSWNCMIAGCIDN----DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
K+ +SWN MI+G DN + + A F + ER+TAT+N +ISG+ +LE
Sbjct: 142 GKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQN 201
Query: 165 LFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYV 216
L ++M NV ++ ++ G ++ G + A L M ++ + +++
Sbjct: 202 LIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACA 261
Query: 217 KNERFCEARELFYR--MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+ +++ Y+ +V + A++ + K G +++A ++ RI + VS NA
Sbjct: 262 RLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNA 321
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
M+ YA +G +E + LF M+ +PD T +SV ++C + G + L+
Sbjct: 322 MLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYN 381
Query: 335 FEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
++ ++ + SR G + ++ EL + P+ V W ++ G+ E I
Sbjct: 382 VTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEI-- 439
Query: 394 SQMGLNGFDPDGI-TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
+ L +P+ ++ L + +AG+ ++ +D M+K G+ S
Sbjct: 440 AAESLIELEPNNTGNYVLLANLYAYAGRWHD-LDRTRQMIKDRGMHKS 486
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 11 YLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAAR 70
Y I+ P R L+T HS IR V + A + ++ G I A
Sbjct: 251 YTVGIILPACAR-LATIARGKQVHAHS----IRQGYELDVHIGAALVDMYAKCGSIKHAM 305
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDND 126
Q++++++ ++++ NA++T Y +G E LF++M V++ +++ C+
Sbjct: 306 QVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAG 365
Query: 127 RIDDAFDYFQAMPERNTAT----YNAMISGFLKHGRLEEATRLFEQMPRR-NVISYTAML 181
++ ++F M N Y ++ + GRL+EA L +++PR+ + + + A+L
Sbjct: 366 AVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALL 425
Query: 182 DGFMKKGEVD 191
G + G V+
Sbjct: 426 GGCVIWGNVE 435
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/540 (34%), Positives = 291/540 (53%), Gaps = 47/540 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D + NA++ Y ++G + + +F +P +IVSWN +IAGC+ +++ D A M
Sbjct: 222 DPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMG 281
Query: 140 ERNTATYNAMIS---------GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
A +S G +K GR + + M + + ++D + K G +
Sbjct: 282 SYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVG-VGLIDMYSKCGLL 340
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------------- 231
AR + D M K+V+ W +I+GY EA LF M
Sbjct: 341 QDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKST 400
Query: 232 ------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
Y + +V +++ + K +LE+A +FE +D V++
Sbjct: 401 AGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYT 460
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+MI Y+Q G+ EEAL+++ M D++PD S+F AC+ L +G+Q HV V++
Sbjct: 461 SMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKC 520
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G ++V N+++ MY++CG I D+ F +I +VSW+ +I AQHGH KAL F
Sbjct: 521 GLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLF 580
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
QM NG P+ IT +S+LSAC HAG V E+ F LM K++GI P+ EHY C+VDIL R
Sbjct: 581 YQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGR 640
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
G+L++A + + MPF+A VWG+LL A I+ N+ELG AA+ + L+P+ S +++L
Sbjct: 641 VGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILL 700
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
+N+YA+ GMW +V +VR MK V K+ SWIE+ +KV+ F+ GD SHP +I+++L
Sbjct: 701 ANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKL 760
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 177/392 (45%), Gaps = 48/392 (12%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQM----PRRNVISYTAMLDGFMKKGEVDKARA 195
E + +++A+ISG++++GR EEA + +M + N +++++L G ++ +
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 196 LSDYMSFKNVVSWTVMITGY-----------VKNERFCEARELFYRMPDYDKNVFVVTAM 244
+ ++S + + +++E + + YD + F A+
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
+ + K G E A +F I D VS+NA+IAG + + AL+L M + P
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
TL S AC+A+ L+ GRQ H +++ E + V +I MYS+CG + D+ + F
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDL 349
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG-------- 416
+ +++ WN+II+ ++ G+ +A+ F+ M G + + T ++L +
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409
Query: 417 -------------HAGKV-NESMD------LFELMVKVYGIIPSSE--HYTCLVDILSRA 454
+ G V N +D L E KV+ + P+ + YT ++ S+
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469
Query: 455 GQLEKAWQI---TQGMPFEADTGVWGSLLAAC 483
G E+A ++ Q + D ++ SL AC
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNAC 501
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 43/265 (16%)
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL---------------------------- 289
+L+ + +P D VS++A+I+GY QNG EEAL
Sbjct: 103 KLVIDSSEP-DLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLT 161
Query: 290 ------------RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
L + MI + P++ +L +V AC+ L+ N G + H +I+ G+++
Sbjct: 162 RNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDS 221
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ NA++ MY++ G + F +I P++VSWN +IA H + AL +MG
Sbjct: 222 DPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMG 281
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
P T S L AC G V L ++K+ + P S L+D+ S+ G L
Sbjct: 282 SYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKM-DMEPDSFVGVGLIDMYSKCGLL 340
Query: 458 EKAWQITQGMPFEADTGVWGSLLAA 482
+ A + MP + D VW S+++
Sbjct: 341 QDARMVFDLMPXK-DVIVWNSIISG 364
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 118/291 (40%), Gaps = 80/291 (27%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
FV I S+ G + AR +FD M KDVI WN+II+GY G+ E+ +LF +M
Sbjct: 325 FVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKE 384
Query: 108 -------------------------------PVKNIVSWNCMIAGCIDNDR-----IDDA 131
+K+ ++ +A + + ++DA
Sbjct: 385 GLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDA 444
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR------------------- 172
F+ P + Y +MI+ + ++G EEA +++ +M R
Sbjct: 445 AKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANL 504
Query: 173 --------------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+V + ++++ + K G +D A + + +S++ +VSW+ MI
Sbjct: 505 SAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMI 564
Query: 213 TGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLF 261
G ++ +A +LFY+M N + ++++ G++ AR F
Sbjct: 565 GGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFF 615
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
VF N+ ++ ++ G I A +F++++ + +++W+A+I G Q+G +++ LF M
Sbjct: 526 VFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLK 585
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLE 160
+ N ++ +++ C + +A +F M + T Y M+ + GRL+
Sbjct: 586 NGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLD 645
Query: 161 EATRLFEQMP 170
EA L ++MP
Sbjct: 646 EAMVLVKEMP 655
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 314/572 (54%), Gaps = 47/572 (8%)
Query: 57 ISALSRAGKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+S ++ G + R++ Q V N+++ Y + G ++E++ +F M +++
Sbjct: 212 LSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDM 271
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQ----AMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
VSWN ++AG + N +A F ++ +TY +I +L A +L
Sbjct: 272 VSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSS 331
Query: 169 MPRRNVISY----TAMLDGFMKKGEVDKARALSDYMS-FKNVVSWTVMITGYVKNERFCE 223
+ +R SY TA++D + K G++ A + MS +NVVSWT MI G ++N
Sbjct: 332 VLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPL 391
Query: 224 ARELFYRM---------------------------------PDYDKNVFVVTAMITGFCK 250
A LF RM +Y+ V TA++ + K
Sbjct: 392 AAALFSRMREDGVAPNDFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSK 451
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+ E A +F+ I KD VS++AM+ YAQ G ++ A +F M ++P++ T+ SV
Sbjct: 452 LCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSV 511
Query: 311 FTAC-SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
AC S ++ GRQ H + I++ + V +A+++MY+R G I ++ F + +
Sbjct: 512 IDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRD 571
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
LVSWN++++ +AQHG+ +KAL F QM G + DG+TFLS++ C HAG V E F+
Sbjct: 572 LVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFD 631
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
M + YGI P+ EHY C+VD+ SRAG+L++A + +GM F A VW +LL AC ++ NV
Sbjct: 632 SMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNV 691
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
ELG+LAA+K+ L+P +SA YV+LSN+Y+AAG W++ VR LM + V K+ SWI+I
Sbjct: 692 ELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQI 751
Query: 550 GNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
NKVH F+ D SHP ++I+ +L+ + ++K
Sbjct: 752 KNKVHSFIASDKSHPLSEQIYAKLRAMTTKLK 783
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 145/285 (50%), Gaps = 27/285 (9%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM------ 200
+++ ++K + + ++FE MP+RNV+++T++L G+++ G ALSD M
Sbjct: 143 TSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDG------ALSDVMELFFRM 196
Query: 201 ----------SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCK 250
+F +V+S V G V R A+ + + VFV +++ + K
Sbjct: 197 RAEGVWPNSVTFASVLS-VVASQGMVDLGRRVHAQSVKFGCC---STVFVCNSLMNMYAK 252
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G++E AR++F ++ +D VS+N ++AG NG EAL+LF +T +V
Sbjct: 253 CGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATV 312
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPN 369
C+ ++ L RQ H V++ GF + +V A++ YS+ G + ++ ++ S N
Sbjct: 313 IKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQN 372
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+VSW +I Q+G A FS+M +G P+ T+ ++L+A
Sbjct: 373 VVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA 417
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 165/350 (47%), Gaps = 15/350 (4%)
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
A + F+++P RN + + A+ D ++G V +A L ++ V V +
Sbjct: 57 ARQAFDEIPHRNTLDH-ALFD-HARRGSVHQA--LDHFLDVHRCHGGRVGGGALVGVLKV 112
Query: 222 C----------EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
C + L R +V V T+++ + K + + R +FE + ++ V+
Sbjct: 113 CGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVT 172
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ +++ GY Q+G + + LF M + P+ T SV + ++ +++ GR+ H +
Sbjct: 173 WTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSV 232
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ G + V VCN+++ MY++CG + ++ + F + + ++VSWNT++A +GH +AL
Sbjct: 233 KFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQ 292
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F + T+ +++ C + ++ + L ++K G T L+D
Sbjct: 293 LFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLK-RGFHSYGNVMTALMDAY 351
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
S+AGQL A I M + W +++ C+ N +V L +MRE
Sbjct: 352 SKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMRE 401
>gi|302753930|ref|XP_002960389.1| hypothetical protein SELMODRAFT_73601 [Selaginella moellendorffii]
gi|300171328|gb|EFJ37928.1| hypothetical protein SELMODRAFT_73601 [Selaginella moellendorffii]
Length = 577
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/513 (35%), Positives = 270/513 (52%), Gaps = 34/513 (6%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNL 103
L V + A + AL++ GK AR +F M +D++ WNA+IT Y QNG LQ ++ +
Sbjct: 52 LLPRWTVVTSTAILVALAKRGKAENARAMFLAMPERDLVAWNAMITAYAQNGNLQVAQAM 111
Query: 104 FQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEAT 163
F MP +N VSWN +I GC A F +MP+R ++ AM++ + + GRLEEA
Sbjct: 112 FFRMPARNFVSWNAIIDGCAQGQDEALAKKVFDSMPQREVVSWTAMVATYSQSGRLEEAQ 171
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
L +MP N++S+ M+ F V++A+ D + VSW +IT Y + +
Sbjct: 172 ALLSKMPALNIVSWNVMIQAFADNLLVEEAKERFDRAPEHDFVSWNAIITAYAQTSQIFL 231
Query: 224 ARELFYRMPDYD-------------------------------KNVFVVTAMITGFCKVG 252
AR F RMP D +NV MITG+ G
Sbjct: 232 ARAAFDRMPQRDVVSWATMIQSYAQEGQPSMDQAKEIFDRAPQRNVVSWNVMITGYSASG 291
Query: 253 MLENARLLFERI---QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
++ +R LFER+ D VS+NA+IAG+ NG+ E AL+LF M + PD A+ S
Sbjct: 292 RIKQSRGLFERMPMMAEHDLVSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDPASYTS 351
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
AC+ L L R H + + G E + V NA++ Y + G + D+EL F+ + S +
Sbjct: 352 ALAACAGLASLGAARDIHWRLCKAGLETDAFVHNALVDFYGKSGRMADAELVFQSLASVD 411
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+V+WN + A ++ G Y + + G +PDGITFL+LL+A GHAG V+ F
Sbjct: 412 VVTWNALAAGLSRQGSYRLVVDLLWAIKDQGLEPDGITFLALLAAYGHAGLVDHGRRAFA 471
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
MV+ Y I P EHY CLVD+L RA +LE+A + MP + W ++L+ACV N+
Sbjct: 472 AMVETYRIEPGIEHYHCLVDMLGRANRLEEAVAVVSAMPHRPSSVTWTTVLSACVKWKNL 531
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ +A + + +DP A YV+++N+Y +AGM
Sbjct: 532 GVASVAFESLLGIDPDGPAAYVLMANVYGSAGM 564
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 228/467 (48%), Gaps = 21/467 (4%)
Query: 64 GKISAARQLFDQMTT-KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGC 122
G+ A+ LFD++ +D + W+ +I + + G L+ ++ +F +P +V+ ++
Sbjct: 9 GRPWDAKNLFDRIPGGRDSVAWSCLIGAFVKIGDLEHARRVFDLLPRWTVVTSTAILVAL 68
Query: 123 IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
+ ++A F AMPER+ +NAMI+ + ++G L+ A +F +MP RN +S+ A++D
Sbjct: 69 AKRGKAENARAMFLAMPERDLVAWNAMITAYAQNGNLQVAQAMFFRMPARNFVSWNAIID 128
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
G + + A+ + D M + VVSWT M+ Y ++ R EA+ L +MP N+
Sbjct: 129 GCAQGQDEALAKKVFDSMPQREVVSWTAMVATYSQSGRLEEAQALLSKMPAL--NIVSWN 186
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
MI F ++E A+ F+R D VS+NA+I YAQ A F M + D+
Sbjct: 187 VMIQAFADNLLVEEAKERFDRAPEHDFVSWNAIITAYAQTSQIFLARAAFDRMPQRDVV- 245
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
AT++ + A +++ ++ + + NV N +IT YS G I S F
Sbjct: 246 SWATMIQSY-AQEGQPSMDQAKE----IFDRAPQRNVVSWNVMITGYSASGRIKQSRGLF 300
Query: 363 RQ---IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
+ + +LVSWN +IA +G E+AL F +M G PD ++ S L+AC
Sbjct: 301 ERMPMMAEHDLVSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDPASYTSALAACAGLA 360
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ + D+ + K G+ + + LVD ++G++ A + Q + D W +L
Sbjct: 361 SLGAARDIHWRLCKA-GLETDAFVHNALVDFYGKSGRMADAELVFQSLA-SVDVVTWNAL 418
Query: 480 LAAC----VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
A L V+L L A K + L+P + ++ L Y AG+
Sbjct: 419 AAGLSRQGSYRLVVDL--LWAIKDQGLEP-DGITFLALLAAYGHAGL 462
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 42/251 (16%)
Query: 211 MITGYVKNERFCEARELFYRMP---------------------DYDKNVF---------V 240
M+T Y N R +A+ LF R+P ++ + VF
Sbjct: 1 MLTVYAHNGRPWDAKNLFDRIPGGRDSVAWSCLIGAFVKIGDLEHARRVFDLLPRWTVVT 60
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
TA++ K G ENAR +F + +D V++NAMI YAQNG + A +F M +
Sbjct: 61 STAILVALAKRGKAENARAMFLAMPERDLVAWNAMITAYAQNGNLQVAQAMFFRMPARNF 120
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+ ++ C+ Q ++ V + + V A++ YS+ G + +++
Sbjct: 121 ----VSWNAIIDGCAQGQDEALAKK----VFDSMPQREVVSWTAMVATYSQSGRLEEAQA 172
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
++ + N+VSWN +I AFA + E+A F + + F +++ ++++A +
Sbjct: 173 LLSKMPALNIVSWNVMIQAFADNLLVEEAKERFDRAPEHDF----VSWNAIITAYAQTSQ 228
Query: 421 VNESMDLFELM 431
+ + F+ M
Sbjct: 229 IFLARAAFDRM 239
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/575 (34%), Positives = 299/575 (52%), Gaps = 46/575 (8%)
Query: 18 PPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT 77
PPIL I+ + + + LI FV N + SR G A ++FD++T
Sbjct: 3 PPILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEIT 62
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
N +L W +I G ++N + D+AF F
Sbjct: 63 QP--------------NAYL-----------------WTSLIHGYVENRQYDEAFSLFIQ 91
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRL----------FEQMPRRNVISYTAMLDGFMKK 187
M + N IS LK L TR F++M ++++S+ M+ G+
Sbjct: 92 MRREPISVLNFTISSVLK--ALARLTRFKGGQAVYGFAFDEMCEKDIVSWNMMISGYGNN 149
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
VD AR D M +NVVSWT MI GYVK EA+ LF MP D + V M++G
Sbjct: 150 DRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNV--MVSG 207
Query: 248 FCKVGMLEN-ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ +G N AR LF+++ K+ V+++ MI GYA+NG +AL LF + D++PD+
Sbjct: 208 YMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETF 267
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
++ + +ACS L +++ + +++ V ++I MY++CG I + F H
Sbjct: 268 ILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAH 327
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+L+ ++T+IAA A HG A+ F +M PD +TFL +L+AC H G V+E
Sbjct: 328 PKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRK 387
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
F+ M + +GI PS +HY C+VD+L R G LE+A+ + + MP + VWG+LLAAC ++
Sbjct: 388 YFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVH 447
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
NV+L E+AA ++ +++P NS Y++LSN+YAAAG W V +VR ++E V K SW
Sbjct: 448 CNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSW 507
Query: 547 IEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
IE+ + VH F+ GDMSH D I L L MK
Sbjct: 508 IELSHVVHEFVMGDMSHTDSDSISLILYLLCEDMK 542
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/595 (31%), Positives = 325/595 (54%), Gaps = 45/595 (7%)
Query: 39 NCLI-RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CL+ + S + V +A + + +I AR++FD + ++ + W+ ++ GY +
Sbjct: 121 HCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVM 180
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDN-DRIDDAFDYFQAM-----PERNTATYNAMIS 151
++ ++F MP +++V+W +I+G N D A + F+ M N T++ ++
Sbjct: 181 DDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVR 240
Query: 152 -----GFLKHGR------------------------------LEEATRLFEQMPRRNVIS 176
G L GR +++A R+ + + + +
Sbjct: 241 ACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNA 300
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
++++G + G ++ A + + M+ N VS+ +MI GY + +++ LF +MP +
Sbjct: 301 LNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPC--R 358
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+F MI+ + + G ++ A LFE + KD V++N+MI+GY +G EEAL+L+ M
Sbjct: 359 TIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITM 418
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++ +Q +T ++F ACS L L++G+ H +I+ FE+NV V ++I MYS+CG I
Sbjct: 419 HRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSI 478
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++++ +F I SPN+ +W +I A HG +A+ F +M G P+G TF+ +LSAC
Sbjct: 479 MEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSAC 538
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
AG VNE M +F M + Y + P+ EHY C+VD+L R+G + +A + + MP EAD V
Sbjct: 539 SRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVV 598
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WG+LL+AC +++E+GE A+KM DP+ + YV+LSN+YA G WR+ VR +++
Sbjct: 599 WGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRG 658
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIA 590
V K SWIE+ NK+H F D SHP + I+ L+ + + SV F ++
Sbjct: 659 FKVKKDPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLEHLTANINSVVHFDHVS 713
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 246/534 (46%), Gaps = 49/534 (9%)
Query: 33 FTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYW 92
+T H SN L + ST N IS ++ K+ ARQLFDQM + V++WN +I+ Y
Sbjct: 22 YTAHQSN-LSEIIST------NIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYS 74
Query: 93 QNGFLQESKNLFQSMPVKNI---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNT 143
++G E+ L SM ++ V C C+ + ++ ++ E
Sbjct: 75 KHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCL-VLKSGSESFE 133
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
+A++ + + EA R+F+ + RRN + ++ ML G++ +D A ++ M +
Sbjct: 134 LVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRR 193
Query: 204 NVVSWTVMITGYVKNERFC-EARELF---YRMPDYDKNVFVVTAMITGFCKVGMLENAR- 258
+VV+WT +I+G+ KN C +A E+F R + N F ++ ++G+L R
Sbjct: 194 DVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRT 253
Query: 259 ---LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
LL + D A++ Y + ++ALR+ G++ P L S+
Sbjct: 254 VHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVV----NPCLNALNSLIEG-- 307
Query: 316 ALQLLNEGRQSHVLVIRNGF-EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
L++ GR ++ NG E N N +I Y+ G + DS+ F ++ + S N
Sbjct: 308 ---LISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSN 364
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+I+ ++++G +KAL F + N DP +T+ S++S H+G+ E++ L+ M ++
Sbjct: 365 TMISVYSRNGEIDKALELFEETK-NEKDP--VTWNSMISGYIHSGQPEEALKLYITMHRL 421
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM---PFEADTGVWGSLLAACVINLNVEL 491
I + ++ L S G L + + + PFE++ V SL I++ +
Sbjct: 422 -SIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSL-----IDMYSKC 475
Query: 492 GEL--AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
G + A + N A + L N +A G+ + + M EQG+ A
Sbjct: 476 GSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGA 529
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 170/408 (41%), Gaps = 82/408 (20%)
Query: 147 NAMISGFLKHGRLEEATRLF--EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
A IS KH RL+E +L+ Q +IS + + K+ ++D AR L D M +
Sbjct: 4 KASISKAWKHQRLKE-FKLYTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRT 62
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPDYDKNV-------------------------- 238
VVSW MI+ Y K+ RF EA L Y M +
Sbjct: 63 VVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHC 122
Query: 239 -----------FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
V +A++ + + AR +F+ + ++ V ++ M+ GY V ++
Sbjct: 123 LVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDD 182
Query: 288 ALRLFSGMIKMDM---------------------------------QPDDATLVSVFTAC 314
AL +F M + D+ P++ T V AC
Sbjct: 183 ALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRAC 242
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
L +L+ GR H L+++ G E + S+ A++ Y C I D+ + + +P L + N
Sbjct: 243 GRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALN 302
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
++I G E A + F+ G+ +P +++ ++ G++++S LFE M
Sbjct: 303 SLIEGLISMGRIEDAELVFN--GMTEMNP--VSYNLMIKGYAVGGQMDDSKRLFEKM-PC 357
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
I S+ ++ + SR G+++KA ++ + E D W S+++
Sbjct: 358 RTIFSSNT----MISVYSRNGEIDKALELFEETKNEKDPVTWNSMISG 401
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/547 (35%), Positives = 296/547 (54%), Gaps = 47/547 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A +S + ++AAR+LFD+MT +D +
Sbjct: 194 VFVKCASSPLVSSSSLMAAARKLFDEMTERDEL--------------------------- 226
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
SW MIAG + N +D A + M E+ +NAMISG++ HG EA +F +M
Sbjct: 227 ----SWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKM 282
Query: 170 PRRNV----ISYTAMLD-----GFMKKGEVDKARALSD----YMSFKNVVSWTVMITGYV 216
+ +YT++L GF G+ A L + F V+ + T Y
Sbjct: 283 YLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVN-NALATLYW 341
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
K + EAR++F +MP K++ A+++G+ G ++ A+ FE + ++ +++ MI
Sbjct: 342 KCGKVDEARQVFNQMPV--KDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMI 399
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+G AQNG EE+L+LF+ M +P D AC+ L L GRQ H ++R GF+
Sbjct: 400 SGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFD 459
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+++S NA+ITMY++CG + + F + + VSWN +IAA QHGH +AL F M
Sbjct: 460 SSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELM 519
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
PD ITFL++LS C HAG V E F+ M +YGI P +HY ++D+L RAG+
Sbjct: 520 LKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGK 579
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
+A + + MP E +W +LLA C I+ N++LG AA+++ EL PQ+ YV+LSN+
Sbjct: 580 FSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNM 639
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
YA G W DV +VR LM+++GV K+ SWIE+ NKVH FL D+ HP + ++ L+
Sbjct: 640 YATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEEL 699
Query: 577 SVQMKSV 583
++M+ +
Sbjct: 700 GLKMRKL 706
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 200/454 (44%), Gaps = 61/454 (13%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--RN 142
N +I Y ++ L + +LF + +IV+ +IA + A + F A P R+
Sbjct: 54 NRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRD 113
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDK------ 192
T YNAMI+G+ + A LF + R ++T++L E +K
Sbjct: 114 TVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIH 173
Query: 193 ARALSDYMSFKNVVSWTVMITGYVK---------NERFCEARELFYRMPDYDKNVFVVTA 243
+ F V +++ +VK + AR+LF M + D+ T
Sbjct: 174 CAVVKSGSGFVTSV-LNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDE--LSWTT 230
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
MI G+ + G L+ AR + + K V++NAMI+GY +G EAL +F M + +Q D
Sbjct: 231 MIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWD 290
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRN----GFEANVSVCNAVITMYSRCGGILDSE 359
+ T SV +AC+ G+Q H ++R + ++SV NA+ T+Y +CG + ++
Sbjct: 291 EFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEAR 350
Query: 360 LAFRQIHSPNLVSWNTIIAAF-------------------------------AQHGHYEK 388
F Q+ +LVSWN I++ + AQ+G E+
Sbjct: 351 QVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEE 410
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
+L F++M GF+P F + AC + L +V++ G S L+
Sbjct: 411 SLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRL-GFDSSLSAGNALI 469
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ ++ G +E A + MP+ D+ W +++AA
Sbjct: 470 TMYAKCGVVEAAHCLFLTMPY-LDSVSWNAMIAA 502
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 163/391 (41%), Gaps = 71/391 (18%)
Query: 211 MITGYVKNERFCEARELF--YRMPDYDKNVFVVTAMITGFCKVGMLENARLLF--ERIQP 266
+I Y K+ A LF R PD + T +I G AR +F +
Sbjct: 56 LIDVYCKSSDLVSAHHLFDEIRQPD----IVARTTLIAAHSSAGNSNLAREIFFATPLGI 111
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL-QLLNEGRQ 325
+D V +NAMI GY+ N A+ LF +++ +PD+ T SV A + + + + +Q
Sbjct: 112 RDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQ 171
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCG-------------------------------- 353
H V+++G SV NA+++++ +C
Sbjct: 172 IHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTM 231
Query: 354 -------GILDSELAFRQIHSPNL-VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
G LD+ F + L V+WN +I+ + HG + +AL F +M L G D
Sbjct: 232 IAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDE 291
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS----------RAG 455
T+ S+LSAC +AG F +V+ I +E L LS + G
Sbjct: 292 FTYTSVLSACANAG-------FFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCG 344
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
++++A Q+ MP + D W ++L+ V N + A E+ +N + ++ +
Sbjct: 345 KVDEARQVFNQMPVK-DLVSWNAILSGYV---NAGRIDEAKSFFEEMPERNLLTWTVMIS 400
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
A G + ++ MK +G + C Y++
Sbjct: 401 GLAQNGFGEESLKLFNRMKSEGF-EPCDYAF 430
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+RL + NA I+ ++ G + AA LF M D ++WNA+I Q+G ++
Sbjct: 453 LVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQA 512
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAM 149
LF+ M ++I +++ +++ C +++ YF++M P + Y M
Sbjct: 513 LELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGED--HYARM 570
Query: 150 ISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVD 191
I + G+ EA + E MP + A+L G G +D
Sbjct: 571 IDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMD 613
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 203/656 (30%), Positives = 330/656 (50%), Gaps = 126/656 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG-------FLQESKN 102
++V+NA I + G + A+++ +M +D +TWN++IT NG FL++ K+
Sbjct: 195 IYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKS 254
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PE---------------- 140
L SMP N+VSW+ +I G N ++A + M P
Sbjct: 255 LDYSMP--NVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQR 312
Query: 141 -----------------RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
N NA++ + + G + A ++F + +NV+S M+ G
Sbjct: 313 LDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVG 372
Query: 184 FMKKGEVDKARALSDYMSF----KNVVSWTVMITGYVKNERFCEARELFYRM-------P 232
+ + G+V KA+ L D M + ++SW +I+GYV+N F EA +F M P
Sbjct: 373 YCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEP 432
Query: 233 D-------------------------------YDKNVFVVTAMITGFCKVGMLENARLLF 261
D + FV A++ + K L A++ F
Sbjct: 433 DSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAF 492
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEE---------------------------------- 287
+ + KD ++NA+I+GY ++ E
Sbjct: 493 DEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLD 552
Query: 288 -ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
++LFS M ++PD T+ + ACS L L G+Q+H I+ G++ +V + A++
Sbjct: 553 LTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALV 612
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MY++CG + ++LA+ +I +PNLVS N ++ A A HGH E+ + F M GF PD +
Sbjct: 613 DMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHV 672
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
TFLS+LS+C H G V + F+LM Y + P+ +HYT +VD+LSR+GQL +A+++ +
Sbjct: 673 TFLSVLSSCVHVGSVETGCEFFDLM-GYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKK 731
Query: 467 MPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
MP E D+ +WG+LL CV + N+ELGE+AA+++ EL+P NS YV+L+NL+A A W D+
Sbjct: 732 MPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDL 791
Query: 527 TRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
RVR +MK++G+ K SWIE N++H FL D SH ++I+ L ++ MK+
Sbjct: 792 ARVRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYLALHMKT 847
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 181/371 (48%), Gaps = 22/371 (5%)
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDG 183
+ DA F+ MP RN ++ A++S +L HG EEA LF+ + V + +
Sbjct: 110 LKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKA 169
Query: 184 FMKKGEVDKARALSDY-MSFK---NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
G V+ R L + F+ N+ +I Y K +A+++ +MP+ D +
Sbjct: 170 CSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTW 229
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKD-----CVSFNAMIAGYAQNGVAEEALRLFSG 294
++IT GM+ A E+++ D VS++A+I G+AQNG EEA+ +
Sbjct: 230 --NSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFR 287
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + P+ TL V AC+ LQ L+ G+Q H + R+ F +N V NA++ +Y RCG
Sbjct: 288 MQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGD 347
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F + N++S NT+I + + G KA F M + G + I++ S++S
Sbjct: 348 MGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISG 407
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSS----EHYTCLVDILS-RAGQLEKAWQITQGMPF 469
+E+ +F+ M+ GI P S T D +S R G+ A I +G+
Sbjct: 408 YVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGL-- 465
Query: 470 EADTGVWGSLL 480
++DT V G+L+
Sbjct: 466 QSDTFVGGALV 476
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 208/489 (42%), Gaps = 118/489 (24%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER--------- 141
Y + G L+++ LF++MP++N+ SW +++ +D+ ++AF FQ +
Sbjct: 104 YARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVF 163
Query: 142 ------------------------------NTATYNAMISGFLKHGRLEEATRLFEQMPR 171
N NA+I + K G L++A ++ +MP
Sbjct: 164 PLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPE 223
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYM-----SFKNVVSWTVMITGYVKNERFCEARE 226
R+ +++ +++ G V +A + M S NVVSW+ +I G+ +N EA E
Sbjct: 224 RDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIE 283
Query: 227 LFYRMP-------------------------------------DYDKNVFVVTAMITGFC 249
+ +RM D+ N VV A++ +
Sbjct: 284 MLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYR 343
Query: 250 KVGMLENARLLFERIQPK-------------------------DC----------VSFNA 274
+ G + A +F + K DC +S+N+
Sbjct: 344 RCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNS 403
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+I+GY +N + +EA +F M+ + ++PD TL SV TAC+ L +G++ H I
Sbjct: 404 IISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVK 463
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G +++ V A++ MYS+C + +++AF ++ ++ +WN +I+ + + E+
Sbjct: 464 GLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLL 523
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M +G+ P+ T+ S+L+ +++ +M LF M ++ + P ++ SR
Sbjct: 524 EKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEM-QISKLRPDIYTVGIILPACSR 582
Query: 454 AGQLEKAWQ 462
LE+ Q
Sbjct: 583 LATLERGKQ 591
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 37/266 (13%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+D + F+ T ++ + + G+L++A LFE + ++ S+ A+++ Y +G+ EEA LF
Sbjct: 90 FDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQ 149
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
+ ++ D VF ACS L + GRQ H LVI+ F N+ V NA+I MY +CG
Sbjct: 150 VLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCG 209
Query: 354 GILDSELAFRQIHS------------------------------------PNLVSWNTII 377
+ D++ ++ PN+VSW+ +I
Sbjct: 210 SLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVI 269
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
FAQ+G+ E+A+ +M + G P+ T +L AC +++ L + + +
Sbjct: 270 GGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITR-HDF 328
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQI 463
I + LVD+ R G + A +I
Sbjct: 329 ISNPVVVNALVDVYRRCGDMGGAAKI 354
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 6/207 (2%)
Query: 298 MDMQP-DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+D +P + + SV +C +L G+Q H I+ GF+A+ + ++ MY+RCG +
Sbjct: 55 LDNKPLNTSKYASVLDSCKCPKL---GKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLK 111
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D++ F + NL SW I++ + HG +E+A + F + +G + D F + AC
Sbjct: 112 DADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACS 171
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
G V L L++K + + L+D+ + G L+ A ++ MP E D+ W
Sbjct: 172 GLGSVELGRQLHGLVIK-FRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMP-ERDSVTW 229
Query: 477 GSLLAACVINLNVELGELAAKKMRELD 503
S++ AC N V +KM+ LD
Sbjct: 230 NSVITACAANGMVYEALEFLEKMKSLD 256
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 294/574 (51%), Gaps = 70/574 (12%)
Query: 79 KDVITWNAIITGYWQN-GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
+DV+ AI+ Y ++ L + F+SM +N +W+ MIA RID A ++
Sbjct: 257 RDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER 316
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
P ++ A A+I+G + GR+++A LFEQ+P V+S+ A++ G+M+ G V++A+ L
Sbjct: 317 DPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELF 376
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDK--------------- 236
D M F+N +SW MI GY +N R EA L + P
Sbjct: 377 DKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALE 436
Query: 237 ----------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
N F A+IT + K +E AR +F R+ KD VS+N+ +A
Sbjct: 437 TGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALV 496
Query: 281 QNGVAEEALRLFSGMIKMD-------------------------------MQPDDATLVS 309
QN + +EA F M+ D P+ L
Sbjct: 497 QNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI 556
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ C +L G+Q H + I+ G ++ + V NA+I+MY +CG DS F + +
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERD 615
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ +WNTII +AQHG +A+ + M G P+ +TF+ LL+AC HAG V+E F+
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
M + YG+ P EHY C+VD+L R G ++ A Q MP E DT +W +LL AC I+ N
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
E+G+ AA+K+ ++P N+ YVMLSN+Y++ GMW +V VR +MK+QGV K+ SW +I
Sbjct: 736 EIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQI 795
Query: 550 GNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+K+H F+ GD H I++I L+ +K+
Sbjct: 796 KDKMHSFVTGDKQHEQIEEIVATLEELYTLLKAT 829
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 279/585 (47%), Gaps = 89/585 (15%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT 89
C N P ++ L S + +S R G++ AR++FD M ++ + WNA+I+
Sbjct: 76 CHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMIS 135
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
Y QNG + ++ LF +MP +++ SWN M+ G + ++ DA + F+ MPERN ++ M
Sbjct: 136 CYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVM 195
Query: 150 ISGFLKHGRLE---EATRLFEQMPR----------------------------------- 171
ISG+ GR+E +A +F +M R
Sbjct: 196 ISGY---GRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALK 252
Query: 172 ----RNVISYTAMLDGFMKKGEV-DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
R+V+ TA+L+ + + V D A + M +N +W+ MI R A
Sbjct: 253 TGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIA 312
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA------------ 274
++ R P K++ TA+ITG + G +++AR+LFE+I VS+NA
Sbjct: 313 VYERDP--VKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVN 370
Query: 275 -------------------MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
MIAGYAQNG +EEAL L + + M P ++L S+F ACS
Sbjct: 371 EAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACS 430
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+ L G Q H L ++ G + N CNA+ITMY +C + + F ++ + ++VSWN+
Sbjct: 431 NIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNS 490
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+AA Q+ ++A F M D +++ +++SA HA + NE+M F+ M +
Sbjct: 491 FLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEH 546
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQI-TQGMPFEADTGVWGSLLAACVINLNVELGEL 494
+P+S T L+ + G + QI T + D+ + ++A +I++ + G
Sbjct: 547 E-LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSEL---IVANALISMYFKCGCA 602
Query: 495 AAKKMREL-DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
++++ +L + ++ + + YA G+ R+ ++ M+ GV
Sbjct: 603 DSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGV 647
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 222/423 (52%), Gaps = 32/423 (7%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
+A+I L R G++ AR++FD M +D+I WN++I+ Y NG +++L+ ++ N+
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+ +++G R+ +A F M ERNT +NAMIS ++++G + A RLF+ MP R+
Sbjct: 98 TGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRD 157
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-- 231
V S+ +ML G+ ++ AR L + M +N+VSWTVMI+GY + E +A ++F +M
Sbjct: 158 VSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR 217
Query: 232 ----PDYDKNVFVVTAMITGFCKVGMLENARLL-----FERIQPKDCVSFNAMIAGYAQN 282
PD N + + G + +LE+ R+L FER D V A++ Y+++
Sbjct: 218 EGLLPD-QSNFASALSAVKGLGNLDVLESLRVLALKTGFER----DVVIGTAILNVYSRD 272
Query: 283 -GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR-QSHVLVIRNGFEANVS 340
V + A++ F MI + ++ T ++ A S + GR + + V +++
Sbjct: 273 TSVLDTAIKFFESMI----ERNEYTWSTMIAALS-----HGGRIDAAIAVYERDPVKSIA 323
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
A+IT ++CG I D+ + F QI P +VSWN +I + Q+G +A F +M
Sbjct: 324 CRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR- 382
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+ I++ +++ G+ E++ L + + + G++PS T + S LE
Sbjct: 383 ---NTISWAGMIAGYAQNGRSEEALGLLQELHR-SGMLPSLSSLTSIFFACSNIVALETG 438
Query: 461 WQI 463
Q+
Sbjct: 439 TQV 441
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E VS C+A I R G + ++ F + ++++WN++I+A+ +G + A +
Sbjct: 31 ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
+ I LLS G G+V E+ +F+ M++ ++ + ++ + G
Sbjct: 91 ISGGNMRTGAI----LLSGYGRLGRVLEARRVFDGMLE-----RNTVAWNAMISCYVQNG 141
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV--YVML 513
+ A ++ MP D W S+L +L + + A+ + E P+ + V VM+
Sbjct: 142 DITMARRLFDAMP-SRDVSSWNSMLTGYCHSLQM----VDARNLFEKMPERNLVSWTVMI 196
Query: 514 S 514
S
Sbjct: 197 S 197
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 294/574 (51%), Gaps = 70/574 (12%)
Query: 79 KDVITWNAIITGYWQN-GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
+DV+ AI+ Y ++ L + F+SM +N +W+ MIA RID A ++
Sbjct: 257 RDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER 316
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
P ++ A A+I+G + GR+++A LFEQ+P V+S+ A++ G+M+ G V++A+ L
Sbjct: 317 DPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELF 376
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDK--------------- 236
D M F+N +SW MI GY +N R EA L + P
Sbjct: 377 DKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALE 436
Query: 237 ----------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
N F A+IT + K +E AR +F R+ KD VS+N+ +A
Sbjct: 437 TGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALV 496
Query: 281 QNGVAEEALRLFSGMIKMD-------------------------------MQPDDATLVS 309
QN + +EA F M+ D P+ L
Sbjct: 497 QNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI 556
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ C +L G+Q H + I+ G ++ + V NA+I+MY +CG DS F + +
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERD 615
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ +WNTII +AQHG +A+ + M G P+ +TF+ LL+AC HAG V+E F+
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
M + YG+ P EHY C+VD+L R G ++ A Q MP E DT +W +LL AC I+ N
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
E+G+ AA+K+ ++P N+ YVMLSN+Y++ GMW +V VR +MK+QGV K+ SW +I
Sbjct: 736 EIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQI 795
Query: 550 GNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+K+H F+ GD H I++I L+ +K+
Sbjct: 796 KDKMHSFVTGDKQHEQIEEIVATLEELYTLLKAT 829
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 279/585 (47%), Gaps = 89/585 (15%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT 89
C N P ++ L S + +S R G++ AR++FD M ++ + WNA+I+
Sbjct: 76 CHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMIS 135
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
Y QNG + ++ LF +MP +++ SWN M+ G + ++ DA + F+ MPERN ++ M
Sbjct: 136 CYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVM 195
Query: 150 ISGFLKHGRLE---EATRLFEQMPR----------------------------------- 171
ISG+ GR+E +A +F +M R
Sbjct: 196 ISGY---GRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALK 252
Query: 172 ----RNVISYTAMLDGFMKKGEV-DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
R+V+ TA+L+ + + V D A + M +N +W+ MI R A
Sbjct: 253 TGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIA 312
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA------------ 274
++ R P K++ TA+ITG + G +++AR+LFE+I VS+NA
Sbjct: 313 VYERDP--VKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVN 370
Query: 275 -------------------MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
MIAGYAQNG +EEAL L + + M P ++L S+F ACS
Sbjct: 371 EAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACS 430
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+ L G Q H L ++ G + N CNA+ITMY +C + + F ++ + ++VSWN+
Sbjct: 431 NIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNS 490
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+AA Q+ ++A F M D +++ +++SA HA + NE+M F+ M +
Sbjct: 491 FLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEH 546
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQI-TQGMPFEADTGVWGSLLAACVINLNVELGEL 494
+P+S T L+ + G + QI T + D+ + ++A +I++ + G
Sbjct: 547 E-LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSEL---IVANALISMYFKCGCA 602
Query: 495 AAKKMREL-DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
++++ +L + ++ + + YA G+ R+ ++ M+ GV
Sbjct: 603 DSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGV 647
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 222/423 (52%), Gaps = 32/423 (7%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
+A+I L R G++ AR++FD M +D+I WN++I+ Y NG +++L+ ++ N+
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+ +++G R+ +A F M ERNT +NAMIS ++++G + A RLF+ MP R+
Sbjct: 98 TGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRD 157
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-- 231
V S+ +ML G+ ++ AR L + M +N+VSWTVMI+GY + E +A ++F +M
Sbjct: 158 VSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR 217
Query: 232 ----PDYDKNVFVVTAMITGFCKVGMLENARLL-----FERIQPKDCVSFNAMIAGYAQN 282
PD N + + G + +LE+ R+L FER D V A++ Y+++
Sbjct: 218 EGLLPD-QSNFASALSAVKGLGNLDVLESLRVLALKTGFER----DVVIGTAILNVYSRD 272
Query: 283 -GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR-QSHVLVIRNGFEANVS 340
V + A++ F MI + ++ T ++ A S + GR + + V +++
Sbjct: 273 TSVLDTAIKFFESMI----ERNEYTWSTMIAALS-----HGGRIDAAIAVYERDPVKSIA 323
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
A+IT ++CG I D+ + F QI P +VSWN +I + Q+G +A F +M
Sbjct: 324 CRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR- 382
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+ I++ +++ G+ E++ L + + + G++PS T + S LE
Sbjct: 383 ---NTISWAGMIAGYAQNGRSEEALGLLQELHR-SGMLPSLSSLTSIFFACSNIVALETG 438
Query: 461 WQI 463
Q+
Sbjct: 439 TQV 441
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E VS C+A I R G + ++ F + ++++WN++I+A+ +G + A +
Sbjct: 31 ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
+ I LLS G G+V E+ +F+ M++ ++ + ++ + G
Sbjct: 91 ISGGNMRTGAI----LLSGYGRLGRVLEARRVFDGMLE-----RNTVAWNAMISCYVQNG 141
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV--YVML 513
+ A ++ MP D W S+L +L + + A+ + E P+ + V VM+
Sbjct: 142 DITMARRLFDAMP-SRDVSSWNSMLTGYCHSLQM----VDARNLFEKMPERNLVSWTVMI 196
Query: 514 S 514
S
Sbjct: 197 S 197
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 286/497 (57%), Gaps = 14/497 (2%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N+++ Y + G + ++ +F+ M V++ SWN M++ R+D A F+ M ER+
Sbjct: 202 NSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIV 261
Query: 145 TYNAMISGFLKHGRLEEATRLFEQM-------PRR----NVISYTAMLDGFMKKGEVDKA 193
++NA+I+G+ ++G + A + F +M P +V+S A L +K G+ +
Sbjct: 262 SWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLR-MLKMGKQMHS 320
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
L M + + + +I+ Y K+ AR + + D NV TA++ G+ K+G
Sbjct: 321 YILRTGMPYSSQIM-NALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGD 379
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ AR +F+ + +D +++ AMI GY QNG +EA+ LF MI+ +P+ TL +V +A
Sbjct: 380 TKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSA 439
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVS 372
C++L L G+Q H IR+ E +VSV NA+IT+Y+R G + + F QI V+
Sbjct: 440 CASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVT 499
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
W ++I A AQHG E+A++ F +M G PD +T++ + SAC HAG +++ +E M+
Sbjct: 500 WTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQML 559
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
+GI+P HY C+VD+L+RAG L +A + Q MP DT VWGSLLAAC + N +L
Sbjct: 560 NEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLA 619
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNK 552
ELAA+K+ +DP NS Y L+N+Y+A G W D R+ L K++ V K+ +SW + +K
Sbjct: 620 ELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSK 679
Query: 553 VHYFLGGDMSHPCIDKI 569
VH F D+ HP D I
Sbjct: 680 VHVFGADDVLHPQRDAI 696
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 241/519 (46%), Gaps = 122/519 (23%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+L + V V N+ + + G AR +F++M + +WNA+++ Y G + +
Sbjct: 189 VIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLA 248
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTAT-------- 145
++F++M ++IVSWN +IAG N D A +F M P+ T T
Sbjct: 249 LSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACAN 308
Query: 146 -------------------------YNAMISGFLKHGRLEEATRLFEQ--MPRRNVISYT 178
NA+IS + K G +E A R+ ++ + NVIS+T
Sbjct: 309 LRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFT 368
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----PD- 233
A+L+G++K G+ +AR + D M+ ++V++WT MI GY +N + EA ELF M P+
Sbjct: 369 ALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEP 428
Query: 234 --------------------------------YDKNVFVVTAMITGFCKVGMLENARLLF 261
+++V V A+IT + + G + AR +F
Sbjct: 429 NSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVF 488
Query: 262 ERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
++I K+ V++ +MI AQ+G+ E+A+ LF M+++ ++PD T + VF+AC+ +
Sbjct: 489 DQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFI 548
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
++G++ + ++ GI+ P + + ++
Sbjct: 549 DKGKRYYEQMLNE-------------------HGIV-----------PEMSHYACMVDLL 578
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP 439
A+ G +A F +M + PD + + SLL+AC +V ++ DL EL K+ I P
Sbjct: 579 ARAGLLTEAHEFIQRMPVA---PDTVVWGSLLAAC----RVRKNADLAELAAEKLLSIDP 631
Query: 440 -SSEHYTCLVDILSRAGQLEKA---WQITQGMPFEADTG 474
+S Y+ L ++ S G+ A W++ + + +TG
Sbjct: 632 DNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETG 670
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 193/429 (44%), Gaps = 80/429 (18%)
Query: 130 DAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+A F +P RN T+N+++S + K GRL +A +F QMP R+ +S+T M+ G +
Sbjct: 82 EARRLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRA 141
Query: 188 GE-----------VDKARALSDYMSFKNVVSWTVMITG---------------------- 214
G V + A S +M NV+S
Sbjct: 142 GRFWDAVKTFLDMVGEGLAPSQFM-LTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPV 200
Query: 215 -------YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
Y K AR +F RM ++ + AM++ + G ++ A +FE ++ +
Sbjct: 201 ANSVLYMYGKCGDAETARAVFERMKVRSESSW--NAMVSLYTHQGRMDLALSMFENMEER 258
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQS 326
VS+NA+IAGY QNG+ + AL+ FS M+ M+PD+ T+ SV +AC+ L++L G+Q
Sbjct: 259 SIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQM 318
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGG------ILDSEL-------------------- 360
H ++R G + + NA+I+ Y++ G I+D +
Sbjct: 319 HSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLG 378
Query: 361 -------AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
F +++ ++++W +I + Q+G ++A+ F M +G +P+ T ++LS
Sbjct: 379 DTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLS 438
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC + + ++ S ++ + +R+G + A ++ + + +T
Sbjct: 439 ACASLAYLGYGKQIHCRAIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKET 497
Query: 474 GVWGSLLAA 482
W S++ A
Sbjct: 498 VTWTSMIVA 506
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 33/275 (12%)
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
F EAR LF +P +N F ++++ + K G L +AR++F ++ +D VS+ M+ G
Sbjct: 80 FHEARRLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLN 139
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
+ G +A++ F M+ + P L +V ++C+A + GR+ H VI+ G + V
Sbjct: 140 RAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVP 199
Query: 341 VCNAVITMYSRCG------------------------------GILDSELA-FRQIHSPN 369
V N+V+ MY +CG G +D L+ F + +
Sbjct: 200 VANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERS 259
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
+VSWN IIA + Q+G + AL FFS+M + +PD T S+LSAC + + +
Sbjct: 260 IVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMH 319
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+++ G+ SS+ L+ +++G +E A +I
Sbjct: 320 SYILRT-GMPYSSQIMNALISTYAKSGSVETARRI 353
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRC----GGILDSELAFRQI--HSPNLVSWNTI 376
GR H ++ G + +CN +++ Y+R G ++ F I N +WN++
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
++ +A+ G A + F+QM + D +++ ++ AG+ +++ F MV G
Sbjct: 104 LSMYAKSGRLADARVVFAQMP----ERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVG-EG 158
Query: 437 IIPS 440
+ PS
Sbjct: 159 LAPS 162
>gi|147841850|emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
Length = 761
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 274/497 (55%), Gaps = 53/497 (10%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
R + R LFD+M +D ++WN +I+GY ++G + E+ LF SM +N+VSWN M+ G
Sbjct: 143 RGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTG 202
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR----------------- 164
+ N ++ A ++F MPER++A+ +A+++G +++G L+EA R
Sbjct: 203 FLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTTRRQDDDKGDLVH 262
Query: 165 --------------------LFEQMP------------RRNVISYTAMLDGFMKKGEVDK 192
LF+Q+P RNV+S+ +M+ ++K ++
Sbjct: 263 AYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFS 322
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
AR L D M ++ +SW MI+GYV+ EA LF MP+ D +MI+GF + G
Sbjct: 323 ARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPD--TLTWNSMISGFAQKG 380
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
LE AR LF I K+ VS+N+MIAGY NG + A L+ M+ +PD TL SV +
Sbjct: 381 NLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLS 440
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLV 371
CS L+ G Q H + + ++ + N++ITMYSRCG I+++ F ++ ++
Sbjct: 441 VCSGFAALHLGMQIHQQITKTVI-PDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVI 499
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SWN +I +A HG AL F M P ITF+S+L+AC HAG V E F+ M
Sbjct: 500 SWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGXVKEGRMHFKSM 559
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
+GI P EH+ LVDI+ R GQLE+A + MPFE D VWG+LL AC ++ NVEL
Sbjct: 560 ACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNVEL 619
Query: 492 GELAAKKMRELDPQNSA 508
+AA+ + +L+P++SA
Sbjct: 620 ARVAAEALMKLEPESSA 636
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 217/446 (48%), Gaps = 47/446 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ T N I+ +NG + E++ LF +MP +NIV+WN MI G + + A F MP
Sbjct: 66 DLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMP 125
Query: 140 ERNTATYNAMISGFLK-HGR-LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
+R+ ++N MISG++ GR +EE LF++MP R+ +S+ M+ G+ + G +D+A L
Sbjct: 126 DRDVVSWNLMISGYVSCRGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLF 185
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENA 257
D M +NVVSW M+TG+++N A E F RMP+ D ++A++ G + G L+ A
Sbjct: 186 DSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSA--SLSALVAGLIQNGELDEA 243
Query: 258 R--LLFERIQPKD----CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA-----T 306
+ LL R Q D ++N ++AGY QNG ++A +LF + D D
Sbjct: 244 KRILLTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERN 303
Query: 307 LVS-------------VFTACSALQLLNEGRQSHVLVIRNGF-----------------E 336
+VS +F+A + E + +G+
Sbjct: 304 VVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPN 363
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ N++I+ +++ G + + F I NLVSWN++IA + +G Y+ A + QM
Sbjct: 364 PDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQM 423
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
L G PD T S+LS C ++ M + + + K +IP L+ + SR G
Sbjct: 424 LLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKT--VIPDIPINNSLITMYSRCGA 481
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAA 482
+ +A I + + + W +++
Sbjct: 482 IVEARTIFDEVKLQKEVISWNAMIGG 507
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 197/585 (33%), Positives = 304/585 (51%), Gaps = 48/585 (8%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
++ +V + + A+ +I + ++F DV A++ Y + G L E++ LF
Sbjct: 110 YTYPFVLKACSGLLAIEDGVEIHSHAKMFG--LESDVFVCTALVDFYAKCGILVEAQRLF 167
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL----KHGRLE 160
SM +++V+WN MIAGC DDA M E ++ I G L + L
Sbjct: 168 SSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALG 227
Query: 161 EATRLFEQMPRRN----VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
L RR+ V+ T +LD + K + AR + D M +N VSW+ MI GYV
Sbjct: 228 HGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYV 287
Query: 217 KNERFCEARELFYRMPDYDK--------------------------------------NV 238
++ EA ELF +M D ++
Sbjct: 288 ASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDI 347
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
+ +++ + K G++++A F+ + PKD VSF+A+++G QNG A AL +F M
Sbjct: 348 LLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS 407
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ PD T++ V ACS L L G SH +I GF + +CNA+I MYS+CG I +
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFA 467
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F ++ ++VSWN +I + HG +AL F + G PD ITF+ LLS+C H+
Sbjct: 468 REVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHS 527
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E F+ M + + I+P EH C+VDIL RAG +++A + MPFE D +W +
Sbjct: 528 GLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSA 587
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL+AC I+ N+ELGE +KK++ L P+++ +V+LSN+Y+AAG W D +R+ K+ G+
Sbjct: 588 LLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGL 647
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
K SWIEI VH F+GGD SH + +I+ +L+ V+MK +
Sbjct: 648 KKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRL 692
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 206/433 (47%), Gaps = 21/433 (4%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----PVKNIVSWNCMIA 120
++ AR+LFD++ VI WN II Y NG + +L+ SM N ++ ++
Sbjct: 58 QVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLK 117
Query: 121 GCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
C I+D + E + A++ + K G L EA RLF M R+V++
Sbjct: 118 ACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA 177
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP---- 232
+ AM+ G G D A L M + + + I G + EA+ L +
Sbjct: 178 WNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT--VGEAKALGHGKALHGY 235
Query: 233 ----DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+D V V T ++ + K L AR +F+ + ++ VS++AMI GY + +EA
Sbjct: 236 CVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEA 295
Query: 289 LRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
L LF MI D M P TL SV AC+ L L+ GR+ H +I+ G ++ + N +++
Sbjct: 296 LELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLS 355
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY++CG I D+ F +++ + VS++ I++ Q+G+ AL F M L+G DPD T
Sbjct: 356 MYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTT 415
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
L +L AC H + ++ V G + L+D+ S+ G++ A ++ M
Sbjct: 416 MLGVLPACSHLAALQHGFCSHGYLI-VRGFATDTLICNALIDMYSKCGKISFAREVFNRM 474
Query: 468 PFEADTGVWGSLL 480
D W +++
Sbjct: 475 D-RHDIVSWNAMI 486
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 196/417 (47%), Gaps = 16/417 (3%)
Query: 118 MIAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
++ CI + + +A + + +++ + + +L ++ A RLF+++P +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSF----KNVVSWTVMI---TGYVKNERFCEARE 226
VI + ++ + G D A L M N ++ ++ +G + E E
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+M + +VFV TA++ + K G+L A+ LF + +D V++NAMIAG + G+ +
Sbjct: 134 -HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
+A++L M + + P+ +T+V V + L G+ H +R F+ V V ++
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLL 252
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL-NGFDPDG 405
MY++C +L + F + N VSW+ +I + ++AL F QM L + DP
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTP 312
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
+T S+L AC ++ L ++K+ ++ T L+ + ++ G ++ A +
Sbjct: 313 VTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNT-LLSMYAKCGVIDDAIRFFD 371
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
M D+ + ++++ CV N N + L+ +M +L + + ML L A + +
Sbjct: 372 EMN-PKDSVSFSAIVSGCVQNGNAAVA-LSIFRMMQLSGIDPDLTTMLGVLPACSHL 426
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 48/325 (14%)
Query: 7 FHQTYLKRILFPPILRILSTPDSCGNFTPHSS----NC-LIRLFSTQYVFVNNAKISALS 61
F Q LK + P + + S +C T S +C +I+L S + + N +S +
Sbjct: 299 FDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYA 358
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
+ G I A + FD+M KD ++++AI++G QNG + ++F+ M + I
Sbjct: 359 KCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP------- 411
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
D +P + A+ GF HG L R F + + A++
Sbjct: 412 --------DLTTMLGVLPA--CSHLAALQHGFCSHGYL--IVRGFAT----DTLICNALI 455
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY----DKN 237
D + K G++ AR + + M ++VSW MI GY + EA LF+ + D
Sbjct: 456 DMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDI 515
Query: 238 VFVVTAMITGFCKVGMLENARLLFE------RIQPK--DCVSFNAMIAGYAQNGVAEEAL 289
F+ +++ G++ RL F+ I P+ C+ M+ + G+ +EA
Sbjct: 516 TFI--CLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI---CMVDILGRAGLIDEAH 570
Query: 290 RLFSGMIKMDMQPDDATLVSVFTAC 314
M +PD ++ +AC
Sbjct: 571 HFIR---NMPFEPDVRIWSALLSAC 592
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 205/636 (32%), Positives = 316/636 (49%), Gaps = 115/636 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
VFV ++ I S G I AR LFD+M +KD + WN ++ GY +NG + +F M
Sbjct: 182 VFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRR 241
Query: 108 --PVKNIVSWNCMIAGCIDNDRID-----------------------------------D 130
N V++ C+++ C I+ D
Sbjct: 242 TETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFD 301
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR------------------- 171
A F MP+ + T+N MISG++++G ++EA+ LF +M
Sbjct: 302 ARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSE 361
Query: 172 ---------------RNVISY-----TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
RN +S +A++D + K +V+ AR + D + ++V T M
Sbjct: 362 GATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAM 421
Query: 212 ITGYVKNERFCEARELFY-----RMP--------------------------------DY 234
I+GYV N A E+F RM +
Sbjct: 422 ISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGH 481
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ +V +A++ + K G L+ A F I KD V +N+MI +QNG EEA+ LF
Sbjct: 482 GGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQ 541
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + D ++ + +AC+ L L+ G++ H ++R F +++ +A+I MYS+CG
Sbjct: 542 MGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGN 601
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F + N VSWN+IIAA+ HG + +L F M +G PD +TFL+++SA
Sbjct: 602 LDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISA 661
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
CGHAG+V+E + F M + GI+ EHY C+VD+ RAG+L +A+ + MPF D G
Sbjct: 662 CGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAG 721
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VWG+LL AC ++ NVEL E+A++ + +LDPQNS YV+LSN++A AG W V ++R LMK
Sbjct: 722 VWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMK 781
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
E+GV K SWI++ N H F+ D SHP +I+
Sbjct: 782 ERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 817
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 219/449 (48%), Gaps = 49/449 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV +++I Y +NG + +++ LF MP K+ V WN M+ G + N D+A F M
Sbjct: 181 DVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMR 240
Query: 140 ---------------------------------------ERNTATYNAMISGFLKHGRLE 160
E ++ N +++ + K G L
Sbjct: 241 RTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLF 300
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV---- 216
+A RLF+ MP+ +++++ M+ G+++ G +D+A L M + ++ + ++
Sbjct: 301 DARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLS 360
Query: 217 KNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+ + +E+ + +VF+ +A+I + K +E AR +F++ P D V A
Sbjct: 361 EGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTA 420
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI+GY NG+ AL +F +++ M+ + TL SV AC+ L L G++ H +++NG
Sbjct: 421 MISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG 480
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ V +A++ MY++CG + + F I + V WN++I + +Q+G E+A+ F
Sbjct: 481 HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFR 540
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDILSR 453
QMG+ G D ++ + LSAC + ++ ++ M++ G S + L+D+ S+
Sbjct: 541 QMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMR--GAFRSDLFAESALIDMYSK 598
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G L+ A ++ M E + W S++AA
Sbjct: 599 CGNLDLACRVFDTME-EKNEVSWNSIIAA 626
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 134/254 (52%), Gaps = 4/254 (1%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ +VFV +++I + + G + +AR LF+R+ KD V +N M+ GY +NG + A +F
Sbjct: 178 FELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFM 237
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + P+ T V + C++ ++N G Q H LV+ +G E + V N ++ MY++CG
Sbjct: 238 EMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCG 297
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ F + +LV+WN +I+ + Q+G ++A F +M PD ITF S L
Sbjct: 298 HLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLP 357
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI-TQGMPFEAD 472
+ + ++ +++ G+ + L+DI + +E A +I Q P D
Sbjct: 358 LLSEGATLRQGKEIHCYIIR-NGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTP--VD 414
Query: 473 TGVWGSLLAACVIN 486
V ++++ V+N
Sbjct: 415 IVVCTAMISGYVLN 428
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 2/250 (0%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N + T ++ + G +A+ +F +++ +N MI G+ G + AL + M+
Sbjct: 80 NGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKML 139
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
PD T V AC L + GR H + GFE +V V +++I YS G I
Sbjct: 140 GCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIH 199
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F ++ S + V WN ++ + ++G ++ A F +M +P+ +TF +LS C
Sbjct: 200 DARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA 259
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
+N L L+V G+ S L+ + ++ G L A ++ MP + D W
Sbjct: 260 SEIMINFGSQLHGLVVSS-GLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP-KTDLVTW 317
Query: 477 GSLLAACVIN 486
+++ V N
Sbjct: 318 NGMISGYVQN 327
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 296 IKMDMQPDDA---TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
++ + DD+ LVS+ C+ L++GRQ+H ++ NG N + ++ MY C
Sbjct: 35 LQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLC 94
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G LD++ F Q+ WN +I F G ++ AL+F+ +M G PD TF ++
Sbjct: 95 GAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVI 154
Query: 413 SACG 416
ACG
Sbjct: 155 KACG 158
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 205/605 (33%), Positives = 321/605 (53%), Gaps = 55/605 (9%)
Query: 19 PILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKIS--ALSRAGKISAARQLFD-- 74
P L +L + F S +I+ VFV + I A+S +G +S A LF+
Sbjct: 30 PYLNLLEKCKNINTFKQIHS-LIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEEN 88
Query: 75 -QMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVSW---NCMIAGCID 124
Q +V WN++I GY + S +LF M P + + +C A
Sbjct: 89 QQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATH 148
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+ A A+ N + ++I + G ++ A +F++ R+ +S+TA++ G+
Sbjct: 149 EGKQLHAHALKLAL-HFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGY 207
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD----------- 233
+ +G +D AR L D + K+VVSW MI+GYV++ RF EA FY M +
Sbjct: 208 VSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMV 267
Query: 234 --------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ N+ + A+I +CK G + AR LF+ I+ K
Sbjct: 268 VVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEK 327
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D +S+N MI GY+ + EEAL LF M++ +++P+D T + + AC+ L L+ G+ H
Sbjct: 328 DVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVH 387
Query: 328 VLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
+ +N +N S+ ++I MY++CG I +E FR +HS NL SWN +++ FA HGH
Sbjct: 388 AYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHA 447
Query: 387 EKALIFFSQMGLNG-FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E+AL FS+M G F PD ITF+ +LSAC AG V+ F M++ YGI P +HY
Sbjct: 448 ERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYG 507
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C++D+L+RA + E+A + + M E D +WGSLL+AC + VE GE A+++ +L+P+
Sbjct: 508 CMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPE 567
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
N+ +V+LSN+YA AG W DV R+R + ++G+ K + IEI VH FL GD HP
Sbjct: 568 NAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPE 627
Query: 566 IDKIH 570
+ I+
Sbjct: 628 CNNIY 632
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 187/595 (31%), Positives = 323/595 (54%), Gaps = 45/595 (7%)
Query: 39 NCLI-RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CL+ + S + V +A + + +I AR++FD + ++ + W+ ++ GY +
Sbjct: 161 HCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVM 220
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPER-----NTATYNAMIS 151
++ ++F MP +++V+W +I+G N D A + F+ M N T++ ++
Sbjct: 221 DDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVR 280
Query: 152 -----GFLKHGR------------------------------LEEATRLFEQMPRRNVIS 176
G L GR +++A R+ + + + +
Sbjct: 281 ACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNA 340
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
++++G + G ++ A + + M+ N VS+ +MI GY + +++ LF +MP +
Sbjct: 341 LNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPC--R 398
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+F MI+ + + G ++ A LFE + KD V++N+MI+GY +G EEAL+L+ M
Sbjct: 399 TIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITM 458
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++ +Q +T ++F ACS L L +G+ H +I+ FE+NV V ++I MYS+CG I
Sbjct: 459 HRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSI 518
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++++ +F I SPN+ +W +I A HG +A+ F M G P+G TF+ +LSAC
Sbjct: 519 MEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSAC 578
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
AG VNE M +F M + Y + P+ EHY C+VD+L R+G + +A + + MP EAD V
Sbjct: 579 SRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVV 638
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WG+LL+AC +++E+GE A+KM DP+ + YV+LSN+YA G WR+ VR +++
Sbjct: 639 WGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRG 698
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIA 590
V K SWIE+ NK+H F D SHP + I+ L+ + + SV F ++
Sbjct: 699 FKVKKDPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLEHLTANINSVVHFDHVS 753
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 247/534 (46%), Gaps = 49/534 (9%)
Query: 33 FTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYW 92
+T H SN L + ST N IS ++ K+ ARQLFDQM + V++WN +I+ Y
Sbjct: 62 YTAHQSN-LSEIIST------NIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYS 114
Query: 93 QNGFLQESKNLFQSMPVKNI---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNT 143
++G E+ L SM ++ V C C+ + ++ ++ E
Sbjct: 115 KHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCL-VLKSGSESFE 173
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
+A++ + + EA R+F+ + RRN + ++ ML G++ +D A ++ M +
Sbjct: 174 LVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRR 233
Query: 204 NVVSWTVMITGYVKNERFC-EARELF---YRMPDYDKNVFVVTAMITGFCKVGMLENAR- 258
+VV+WT +I+G+ KN C +A E+F R + N F ++ ++G+L R
Sbjct: 234 DVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRT 293
Query: 259 ---LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
LL + D A++ Y + ++ALR+ G++ P L S+
Sbjct: 294 VHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVV----NPCLNALNSLIEG-- 347
Query: 316 ALQLLNEGRQSHVLVIRNGF-EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
L++ GR ++ NG E N N +I Y+ G + DS+ F ++ + S N
Sbjct: 348 ---LISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSN 404
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+I+ ++++G +KAL F + N DP +T+ S++S H+G+ E++ L+ M ++
Sbjct: 405 TMISVYSRNGEIDKALELFEETK-NEKDP--VTWNSMISGYIHSGQPEEALKLYITMHRL 461
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM---PFEADTGVWGSLLAACVINLNVEL 491
I + ++ L S G L++ + + PFE++ V SL I++ +
Sbjct: 462 -SIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSL-----IDMYSKC 515
Query: 492 GEL--AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
G + A + N A + L N +A G+ + + M EQG+ A
Sbjct: 516 GSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGA 569
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 170/408 (41%), Gaps = 82/408 (20%)
Query: 147 NAMISGFLKHGRLEEATRLF--EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
A IS KH RL+E +L+ Q +IS + + K+ ++D AR L D M +
Sbjct: 44 KASISKAWKHQRLKE-FKLYTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRT 102
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPDYDKNV-------------------------- 238
VVSW MI+ Y K+ RF EA L Y M +
Sbjct: 103 VVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHC 162
Query: 239 -----------FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
V +A++ + + AR +F+ + ++ V ++ M+ GY V ++
Sbjct: 163 LVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDD 222
Query: 288 ALRLFSGMIKMDM---------------------------------QPDDATLVSVFTAC 314
AL +F M + D+ P++ T V AC
Sbjct: 223 ALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRAC 282
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
L +L+ GR H L+++ G E + S+ A++ Y C I D+ + + +P L + N
Sbjct: 283 GRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALN 342
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
++I G E A + F+ G+ +P +++ ++ G++++S LFE M
Sbjct: 343 SLIEGLISMGRIEDAELVFN--GMTEMNP--VSYNLMIKGYAVGGQMDDSKRLFEKM-PC 397
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
I S+ ++ + SR G+++KA ++ + E D W S+++
Sbjct: 398 RTIFSSNT----MISVYSRNGEIDKALELFEETKNEKDPVTWNSMISG 441
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 197/585 (33%), Positives = 304/585 (51%), Gaps = 48/585 (8%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
++ +V + + A+ +I + ++F DV A++ Y + G L E++ LF
Sbjct: 110 YTYPFVLKACSGLLAIEDGVEIHSHAKMFG--LESDVFVCTALVDFYAKCGILVEAQRLF 167
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL----KHGRLE 160
SM +++V+WN MIAGC DDA M E ++ I G L + L
Sbjct: 168 SSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALG 227
Query: 161 EATRLFEQMPRRN----VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
L RR+ V+ T +LD + K + AR + D M +N VSW+ MI GYV
Sbjct: 228 HGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYV 287
Query: 217 KNERFCEARELFYRMPDYDK--------------------------------------NV 238
++ EA ELF +M D ++
Sbjct: 288 XSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDI 347
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
+ +++ + K G++++A F+ + PKD VSF+A+++G QNG A AL +F M
Sbjct: 348 LLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS 407
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ PD T++ V ACS L L G SH +I GF + +CNA+I MYS+CG I +
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFA 467
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F ++ ++VSWN +I + HG +AL F + G PD ITF+ LLS+C H+
Sbjct: 468 REVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHS 527
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E F+ M + + I+P EH C+VDIL RAG +++A + MPFE D +W +
Sbjct: 528 GLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSA 587
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL+AC I+ N+ELGE +KK++ L P+++ +V+LSN+Y+AAG W D +R+ K+ G+
Sbjct: 588 LLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGL 647
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
K SWIEI VH F+GGD SH + +I+ +L+ V+MK +
Sbjct: 648 KKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRL 692
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 205/433 (47%), Gaps = 21/433 (4%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----PVKNIVSWNCMIA 120
++ AR+LFD++ VI WN II Y NG + +L+ SM N ++ ++
Sbjct: 58 QVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLK 117
Query: 121 GCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
C I+D + E + A++ + K G L EA RLF M R+V++
Sbjct: 118 ACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA 177
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP---- 232
+ AM+ G G D A L M + + + I G + EA+ L +
Sbjct: 178 WNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT--VGEAKALGHGKALHGY 235
Query: 233 ----DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+D V V T ++ + K L AR +F+ + ++ VS++AMI GY + +EA
Sbjct: 236 CVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEA 295
Query: 289 LRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
L LF MI D M P TL SV AC+ L L+ GR+ H +I+ G ++ + N +++
Sbjct: 296 LELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLS 355
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY++CG I D+ F ++ + VS++ I++ Q+G+ AL F M L+G DPD T
Sbjct: 356 MYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTT 415
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
L +L AC H + ++ V G + L+D+ S+ G++ A ++ M
Sbjct: 416 MLGVLPACSHLAALQHGFCSHGYLI-VRGFATDTLICNALIDMYSKCGKISFAREVFNRM 474
Query: 468 PFEADTGVWGSLL 480
D W +++
Sbjct: 475 D-RHDIVSWNAMI 486
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 201/430 (46%), Gaps = 18/430 (4%)
Query: 107 MPVKNIVSWNCM--IAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLE 160
MP++ V N + + CI + + +A + + +++ + + +L ++
Sbjct: 1 MPLRXEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVV 60
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF----KNVVSWTVMI---T 213
A RLF+++P +VI + ++ + G D A L M N ++ ++ +
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
G + E E +M + +VFV TA++ + K G+L A+ LF + +D V++N
Sbjct: 121 GLLAIEDGVEIHS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWN 179
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AMIAG + G+ ++A++L M + + P+ +T+V V + L G+ H +R
Sbjct: 180 AMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRR 239
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
F+ V V ++ MY++C +L + F + N VSW+ +I + ++AL F
Sbjct: 240 SFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELF 299
Query: 394 SQMGL-NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
QM L + DP +T S+L AC ++ L ++K+ G + L+ + +
Sbjct: 300 DQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL-GXVLDILLGNTLLSMYA 358
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
+ G ++ A + M D+ + ++++ CV N N + L+ +M +L + + M
Sbjct: 359 KCGVIDDAIRFFDXMN-PKDSVSFSAIVSGCVQNGNAAVA-LSIFRMMQLSGIDPDLTTM 416
Query: 513 LSNLYAAAGM 522
L L A + +
Sbjct: 417 LGVLPACSHL 426
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 135/325 (41%), Gaps = 48/325 (14%)
Query: 7 FHQTYLKRILFPPILRILSTPDSCGNFTPHSS----NC-LIRLFSTQYVFVNNAKISALS 61
F Q LK + P + + S +C T S +C +I+L + + N +S +
Sbjct: 299 FDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYA 358
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
+ G I A + FD M KD ++++AI++G QNG + ++F+ M + I
Sbjct: 359 KCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP------- 411
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
D +P + A+ GF HG L R F + + A++
Sbjct: 412 --------DLTTMLGVLPA--CSHLAALQHGFCSHGYL--IVRGFAT----DTLICNALI 455
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY----DKN 237
D + K G++ AR + + M ++VSW MI GY + EA LF+ + D
Sbjct: 456 DMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDI 515
Query: 238 VFVVTAMITGFCKVGMLENARLLFE------RIQPK--DCVSFNAMIAGYAQNGVAEEAL 289
F+ +++ G++ RL F+ I P+ C+ M+ + G+ +EA
Sbjct: 516 TFI--CLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI---CMVDILGRAGLIDEAH 570
Query: 290 RLFSGMIKMDMQPDDATLVSVFTAC 314
M +PD ++ +AC
Sbjct: 571 HFIR---NMPFEPDVRIWSALLSAC 592
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 201/569 (35%), Positives = 305/569 (53%), Gaps = 69/569 (12%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N ++ S+ + AAR+LFD D+++WN II+GY QNG + E+++LF+ M
Sbjct: 196 VANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGM---- 251
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
I+ I D I A + + E + + I G++ + A L
Sbjct: 252 -------ISAGIKPDSITFA-SFLPCVNELLSLKHCKEIHGYI----IRHAVVL------ 293
Query: 172 RNVISYTAMLDGFMKKGEVDKA-RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY- 229
+V +A++D + K +V+ A + L SF VV T MI+GYV N + EA E F
Sbjct: 294 -DVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVC-TTMISGYVLNGKNKEALEAFRW 351
Query: 230 ----RM-----------PDY---------------------DKNVFVVTAMITGFCKVGM 253
RM P + D+ V +A++ + K G
Sbjct: 352 LVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGR 411
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L+ A +F RI KD + +N+MI +QNG EA+ LF M + D ++ +A
Sbjct: 412 LDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSA 471
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C+ L L+ G++ H L+I+ +++ +++I MY++CG + S F ++ N VSW
Sbjct: 472 CANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSW 531
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N+II+A+ HG ++ L F +M NG PD +TFL ++SACGHAG+V+E + + LM +
Sbjct: 532 NSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTE 591
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
YGI EHY C+ D+ RAG+L++A++ MPF D GVWG+LL AC I+ NVEL E
Sbjct: 592 EYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAE 651
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
+A+K + +LDP NS YV+L+N+ A AG WR V +VR +MKE+GV K YSWIE+ N
Sbjct: 652 VASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNAT 711
Query: 554 HYFLGGDMSHP-------CIDKIHLELKR 575
H F+ D SHP +D + LELK+
Sbjct: 712 HMFVAADGSHPLTAQIYSVLDSLLLELKK 740
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 222/448 (49%), Gaps = 18/448 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
VFV ++ I + G +S A+ LFD + KD + WN ++ GY +NG + +F M
Sbjct: 93 VFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRH 152
Query: 108 -PVK-NIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEE 161
+K N V++ C+++ C +D E ++ N +++ + K L+
Sbjct: 153 SEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQA 212
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK--NE 219
A +LF+ P+ +++S+ ++ G+++ G + +A L M + ++ ++ NE
Sbjct: 213 ARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNE 272
Query: 220 ----RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ C+ + +VF+ +A+I + K +E A+ + + D V M
Sbjct: 273 LLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTM 332
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+GY NG +EAL F +++ M+P T S+F A + L LN G++ H +I+
Sbjct: 333 ISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKL 392
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ V +A++ MY++CG + + F +I + + WN++I + +Q+G +A+ F Q
Sbjct: 393 DEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQ 452
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDILSRA 454
MG+ G D ++ LSAC + ++ ++ LM+K G + S + + L+D+ ++
Sbjct: 453 MGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIK--GPLRSDLYAESSLIDMYAKC 510
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAA 482
G L + ++ M E + W S+++A
Sbjct: 511 GNLNFSRRVFDRMQ-ERNEVSWNSIISA 537
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 194/442 (43%), Gaps = 49/442 (11%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTA 144
Y + G L+++KNLF ++ + +WN MI G + + A ++ M P++ T
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 145 TYNAMISGFLKH---GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
Y LK G++ T + + +V ++++ + + G + A+ L D +
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGL-KEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------------- 233
K+ V W VM+ GYVKN A ++F M P+
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+ + V ++ + K L+ AR LF+ D VS+N +I+GY QNG+
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EA LF GMI ++PD T S + L L ++ H +IR+ +V + +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+I +Y +C + ++ Q S + V T+I+ + +G ++AL F + P
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+TF S+ A +N +L ++K + + ++D+ ++ G+L+ A ++
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLACRVF 419
Query: 465 QGMPFEADTGVWGSLLAACVIN 486
+ E D W S++ +C N
Sbjct: 420 NRIT-EKDAICWNSMITSCSQN 440
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++ ++ I ++ G ++ +R++FD+M ++ ++WN+II+ Y +G L+E LF M
Sbjct: 497 LYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLR 556
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
I V++ +I+ C ++D+ Y+ M E Y + F + GRL+
Sbjct: 557 NGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLD 616
Query: 161 EATRLFEQMP 170
EA MP
Sbjct: 617 EAFETINSMP 626
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY R G + D++ F + +WN +I F G + AL+F+ +M G PD T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 408 FLSLLSACG-----HAGK-VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
F ++ AC GK V+E+++L L V+ + SS L+ + + G L A
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVF--VGSS-----LIKLYAENGHLSDAQ 113
Query: 462 QITQGMPFEADTGVWGSLLAACVIN 486
+ +P + D+ +W +L V N
Sbjct: 114 YLFDNIP-QKDSVLWNVMLNGYVKN 137
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 319/647 (49%), Gaps = 122/647 (18%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
FV ++ I + G I AR+LFD+M KD + WN ++ G+ + G + +F+ M
Sbjct: 8 FVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNC 67
Query: 108 -PVKNIVSWNCMIAGCIDN-----------------------------------DRIDDA 131
N +++ +++ C ++ DA
Sbjct: 68 QTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDA 127
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKK 187
F MP+ N T+N MI+GF+++G ++EA+ LF +M V I++ + L +
Sbjct: 128 LKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTES 187
Query: 188 GEVDKARALSDYM------------------SFK-----------------NVVSWTVMI 212
+ + + + Y+ FK ++V T +I
Sbjct: 188 ASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAII 247
Query: 213 TGYVKNERFCEARELFYRMPD-------------------------------------YD 235
+GYV N +A E+F + + D
Sbjct: 248 SGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLD 307
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ V +A++ + K G L+ A +F R+ KD V +NA+I +QNG +EA+ LF M
Sbjct: 308 ERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQM 367
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ + D ++ + +AC+ L L+ G+ H +I+ F++ V +A+I MY +CG +
Sbjct: 368 GREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNL 427
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F + N VSWN+IIAA+ HGH E +L F +M +G PD +TFL++LSAC
Sbjct: 428 SVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSAC 487
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
GHAG+V++ + F M + YGI EHY C+VD+ RAG+L +A++ + MPF D GV
Sbjct: 488 GHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGV 547
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WG+LL AC ++ NVEL E+A++ + +LDP+NS YV+LSN++A AG W V ++R LMK+
Sbjct: 548 WGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKK 607
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHP-------CIDKIHLELKR 575
+GV K YSWIE+ H F+ D SHP ++ + LEL++
Sbjct: 608 RGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRK 654
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/510 (24%), Positives = 240/510 (47%), Gaps = 51/510 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM- 138
D +++I Y +NG +++++ LF MP K+ V WN M+ G + + A F+ M
Sbjct: 6 DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65
Query: 139 ---PERNTATY-----------------------------------NAMISGFLKHGRLE 160
+ N+ T+ NA+++ + K G+L
Sbjct: 66 NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLS 125
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYV 216
+A +LF MP NV+++ M+ GF++ G +D+A L M V +++ +
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVT 185
Query: 217 KNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
++ + +E+ + + +VF+ +A+I + K + A +F++ D V A
Sbjct: 186 ESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTA 245
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+I+GY NG+ +AL +F +++ M P+ TL SV AC+ L LN G++ H ++++G
Sbjct: 246 IISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHG 305
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ V +A++ MY++CG + + FR++ + V WN II +Q+G ++A+ F
Sbjct: 306 LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFR 365
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDILSR 453
QMG G D ++ + LSAC + ++ + M+K G S + L+D+ +
Sbjct: 366 QMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIK--GAFDSEVFAESALIDMYGK 423
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE--LDPQNSAVYV 511
G L A + M E + W S++AA + ++E+ KM E + P +
Sbjct: 424 CGNLSVARCVFDMMR-EKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLT 482
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
+LS A + + + R + +E G+ +
Sbjct: 483 ILSACGHAGQVDKGIQYFRCMTEEYGIPAR 512
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 126/230 (54%), Gaps = 1/230 (0%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ + FV +++I + + G +E+AR LF+++ KDCV +N M+ G+ + G A+++F
Sbjct: 3 FNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFE 62
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M +P+ T SV + C++ L G Q H LVI GF + V NA++ MYS+ G
Sbjct: 63 DMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFG 122
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ F + N+V+WN +IA F Q+G ++A + FS+M G PD ITF S L
Sbjct: 123 QLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLP 182
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ + + + ++ +++ +GI + L+DI + + A +I
Sbjct: 183 SVTESASLKQGKEIHGYILR-HGIALDVFLKSALIDIYFKCRDVGMACKI 231
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 175/412 (42%), Gaps = 82/412 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF----Q 105
VF+ +A I + + A ++F Q T D++ AII+GY NG ++ +F +
Sbjct: 209 VFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLE 268
Query: 106 SMPVKNIVSWNCMIAGC--------------------IDN---------------DRIDD 130
N V+ ++ C +D R+D
Sbjct: 269 EKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDL 328
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMK 186
A+ F+ MPE++ +NA+I+ ++G+ +EA LF QM R + +S +A L
Sbjct: 329 AYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACAN 388
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
+ +A+ + MI G +E F E +A+I
Sbjct: 389 LPALHHGKAIHSF-----------MIKGAFDSEVFAE------------------SALID 419
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ K G L AR +F+ ++ K+ VS+N++IA Y +G E +L LF M++ +QPD T
Sbjct: 420 MYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVT 479
Query: 307 LVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
+++ +AC +++G Q + G A + ++ ++ R G + + AF I
Sbjct: 480 FLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNE---AFETI 536
Query: 366 H----SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
SP+ W T++ A HG+ E A + + L DP+ LLS
Sbjct: 537 KNMPFSPDDGVWGTLLGACRVHGNVELAEV--ASRCLLDLDPENSGCYVLLS 586
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GF + V +++I +Y+ G I D+ F ++ + + V WN ++ F + G A+ F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY------TCL 447
M P+ ITF S+LS C S L E +++G++ S + L
Sbjct: 62 EDMRNCQTKPNSITFASVLSICA-------SEALSEFGNQLHGLVISCGFHFDPLVANAL 114
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGV--WGSLLAACVIN 486
V + S+ GQL A ++ MP DT V W ++A V N
Sbjct: 115 VAMYSKFGQLSDALKLFNTMP---DTNVVTWNGMIAGFVQN 152
>gi|334183275|ref|NP_175765.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806499|sp|Q9C8L6.2|PPR80_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g53600, mitochondrial; Flags: Precursor
gi|332194847|gb|AEE32968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 717
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 198/567 (34%), Positives = 304/567 (53%), Gaps = 44/567 (7%)
Query: 57 ISALSRAGKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
I+ RAG+ A L+ + K D + N +++GY + G E+ +FQ M VK +VS
Sbjct: 151 ITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVS 210
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR--- 171
+ M+ G RI DA F M ERN T+ AMI G+ K G E+ LF +M +
Sbjct: 211 CSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 172 ---------------RNVISY----------------------TAMLDGFMKKGEVDKAR 194
R+ + Y +++ + K G + +A+
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
A+ M K+ VSW +ITG V+ ++ EA ELF +MP K++ T MI GF G +
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG--KDMVSWTDMIKGFSGKGEI 388
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
LF + KD +++ AMI+ + NG EEAL F M++ ++ P+ T SV +A
Sbjct: 389 SKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSAT 448
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
++L L EG Q H V++ ++SV N++++MY +CG D+ F I PN+VS+N
Sbjct: 449 ASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYN 508
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+I+ ++ +G +KAL FS + +G +P+G+TFL+LLSAC H G V+ F+ M
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS 568
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
Y I P +HY C+VD+L R+G L+ A + MP + +GVWGSLL+A +L V+L EL
Sbjct: 569 YNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAEL 628
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
AAKK+ EL+P ++ YV+LS LY+ G RD R+ + K + + K SWI + +VH
Sbjct: 629 AAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVH 688
Query: 555 YFLGGDMSHPCIDKIHLELKRASVQMK 581
FL GD S +++I LK +M+
Sbjct: 689 NFLAGDESQLNLEEIGFTLKMIRKEME 715
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 216/398 (54%), Gaps = 20/398 (5%)
Query: 70 RQLFDQMTTKDVI-TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
R + TT I N+ I+ + +NG LQE++ +F+ M ++IVSW MI+ +N ++
Sbjct: 38 RNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKM 97
Query: 129 DDAFDYFQAMPERNTATYNAMISGFLKHG-RLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
A+ F MP R T +YNAMI+ +K+ L +A LF +P +N +SY M+ GF++
Sbjct: 98 SKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRA 157
Query: 188 GEVDKARAL--SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
G D+A L + F++ V+ V+++GY++ ++ EA +F M K V ++M+
Sbjct: 158 GRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMA--VKEVVSCSSMV 215
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDD 304
G+CK+G + +AR LF+R+ ++ +++ AMI GY + G E+ LF M + D++ +
Sbjct: 216 HGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNS 275
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
TL +F AC EG Q H LV R E ++ + N++++MYS+ G + +++ F
Sbjct: 276 NTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGV 335
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ + + VSWN++I Q +A F +M D +++ ++ G++++
Sbjct: 336 MKNKDSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKC 391
Query: 425 MDLFELMVKVYGIIPSSEH--YTCLVDILSRAGQLEKA 460
++LF G++P ++ +T ++ G E+A
Sbjct: 392 VELF-------GMMPEKDNITWTAMISAFVSNGYYEEA 422
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 219/502 (43%), Gaps = 112/502 (22%)
Query: 34 TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQ 93
T + N L ++ +F N++IS +R G + A +F QM+ + +++W A+I+ Y +
Sbjct: 34 TQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAE 93
Query: 94 NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND-RIDDAFDYFQAMPERNTATYNAMISG 152
NG + ++ +F MPV+ S+N MI I N + A++ F +PE+N +Y MI+G
Sbjct: 94 NGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITG 153
Query: 153 FLKHGRLEEA---------------------------------TRLFEQMPRRNVISYTA 179
F++ GR +EA R+F+ M + V+S ++
Sbjct: 154 FVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSS 213
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------- 231
M+ G+ K G + AR+L D M+ +NV++WT MI GY K F + LF RM
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV 273
Query: 232 ------------PDYDK------------------NVFVVTAMITGFCKVGMLENARLLF 261
D+ + ++F+ ++++ + K+G + A+ +F
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
++ KD VS+N++I G Q EA LF M DM
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDM--------------------- 372
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
VS + +I +S G I F + + ++W +I+AF
Sbjct: 373 -----------------VSWTD-MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFV 414
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
+G+YE+AL +F +M P+ TF S+LSA + E + + +VK+ I+
Sbjct: 415 SNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM-NIVNDL 473
Query: 442 EHYTCLVDILSRAGQLEKAWQI 463
LV + + G A++I
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKI 495
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 33/278 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N+ +S S+ G + A+ +F M KD ++WN++ITG Q + E+ LF+ MP
Sbjct: 310 LFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG 369
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K++VSW MI G I + F MPE++ T+ AMIS F+ +G EEA F +M
Sbjct: 370 KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM 429
Query: 170 PRRNVI--SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
++ V SYT F +V+S T + + E ++
Sbjct: 430 LQKEVCPNSYT-----------------------FSSVLSATASLADLI------EGLQI 460
Query: 228 FYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
R+ + ++ V ++++ +CK G +A +F I + VS+N MI+GY+ NG
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFG 520
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++AL+LFS + +P+ T +++ +AC + ++ G
Sbjct: 521 KKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 258/424 (60%), Gaps = 2/424 (0%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
L A +LF R+V+S+ AM+DG++K E+ AR + D M ++V+SW MI GY
Sbjct: 246 LGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIV 305
Query: 219 ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+ EA+ LF MP+ +N+ +M+ GF K G +E+A LF + +D VS+N+M+A
Sbjct: 306 GKIDEAKRLFDEMPE--RNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLAC 363
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
YAQ G EAL LF M + ++P +AT+VS+ +AC+ L L++G H + N E N
Sbjct: 364 YAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVN 423
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V A++ MY++CG I + F + S ++++WNTIIA A HG+ ++A F +M
Sbjct: 424 SIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKE 483
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
G +P+ ITF+++LSAC HAG V+E L + M YGI P EHY C++D+L+RAG LE
Sbjct: 484 AGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLE 543
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+A ++ MP E + G+LL C I+ N ELGE+ K++ L P +S Y++LSN+YA
Sbjct: 544 EAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYA 603
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASV 578
AA W D +VR LMK G++K S IE+ VH F+ GD SHP +KI+ +L
Sbjct: 604 AAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHT 663
Query: 579 QMKS 582
++KS
Sbjct: 664 RLKS 667
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 186/345 (53%), Gaps = 8/345 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
++ ++ I + + AA+QLF+ + +DV++WNA+I GY ++ + ++ +F M +
Sbjct: 231 YIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCR 290
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+++SWN MI G +ID+A F MPERN ++N+M++GF+K G +E+A LF +MP
Sbjct: 291 DVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMP 350
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
R+V+S+ +ML + + G+ ++A AL D M V + + A +
Sbjct: 351 CRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLH 410
Query: 231 MPDY------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+ Y + N V TA++ + K G + A +F ++ KD +++N +IAG A +G
Sbjct: 411 LHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGN 470
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVLVIRNGFEANVSVCN 343
+EA +LF M + ++P+D T V++ +ACS +++EG++ + G E V
Sbjct: 471 VKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYG 530
Query: 344 AVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
VI + +R G + ++ EL PN + ++ HG++E
Sbjct: 531 CVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFE 575
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 151/321 (47%), Gaps = 51/321 (15%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L L S + V NA I + ++ AR +FD+M +DVI+WN +I GY G + E+
Sbjct: 252 LFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEA 311
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
K LF MP +N+VSWN M+AG + ++DAF F MP R+ ++N+M++ + + G+
Sbjct: 312 KRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPN 371
Query: 161 EATRLFEQM------PRR---------------------------------NVISYTAML 181
EA LF+QM P N I TA++
Sbjct: 372 EALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALV 431
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVF 239
D + K G++ A + + M K+V++W +I G + EA++LF M + + N
Sbjct: 432 DMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDI 491
Query: 240 VVTAMITGFCKVGMLENARLLFE------RIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
A+++ GM++ + L + I+PK + +I A+ G EEA+ L
Sbjct: 492 TFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPK-VEHYGCVIDLLARAGFLEEAMELIG 550
Query: 294 GMIKMDMQPDDATLVSVFTAC 314
M M+P+ + L ++ C
Sbjct: 551 ---TMPMEPNPSALGALLGGC 568
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 150/295 (50%), Gaps = 21/295 (7%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ + ++V+++I + L A+ LF +D VS+NAMI GY ++ A +F
Sbjct: 226 FECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFD 285
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ D+ + ++ + + ++E ++ + E N+ N+++ + +CG
Sbjct: 286 RMVCRDV----ISWNTMINGYAIVGKIDEAKR----LFDEMPERNLVSWNSMLAGFVKCG 337
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ F ++ ++VSWN+++A +AQ G +AL F QM G P T +SLLS
Sbjct: 338 NVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLS 397
Query: 414 ACGHAGKVNESMDLFELM----VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
AC H G +++ + L + ++V I+ T LVD+ ++ G++ A Q+ M
Sbjct: 398 ACAHLGALDKGLHLHTYINDNRIEVNSIVG-----TALVDMYAKCGKISLATQVFNAME- 451
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRE--LDPQNSAVYVMLSNLYAAAGM 522
D W +++A I+ NV+ + K+M+E ++P N +V + + + AGM
Sbjct: 452 SKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEP-NDITFVAILSACSHAGM 505
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 109/228 (47%), Gaps = 10/228 (4%)
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L A+ +F +Q +N++I + + EAL L+ M++ ++PD T V A
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 204
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C+ + G H V+++GFE + + +++I +Y+ + ++ F + ++VSW
Sbjct: 205 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSW 264
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N +I + +H A + F +M D I++ ++++ GK++E+ LF+ M +
Sbjct: 265 NAMIDGYVKHVEMGHARMVFDRMVCR----DVISWNTMINGYAIVGKIDEAKRLFDEMPE 320
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ + ++ + G +E A+ + MP D W S+LA
Sbjct: 321 RNLV-----SWNSMLAGFVKCGNVEDAFGLFSEMPCR-DVVSWNSMLA 362
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 201/658 (30%), Positives = 321/658 (48%), Gaps = 115/658 (17%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R V++ N + + G ++ ARQLFD+ + K V++WN +I+GY G QE+
Sbjct: 54 ILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEA 113
Query: 101 KNLFQSM------PVK-------------NIVSW--------------------NCMIAG 121
NLF M P K +++W N +I+
Sbjct: 114 FNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISM 173
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRR--- 172
+ DA F AM R+ ++ + + + G EE+ + + M P R
Sbjct: 174 YAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITY 233
Query: 173 -NVISY-----------------------------TAMLDGFMKKGEVDKARALSDYMSF 202
NV+S TA+ +MK G AR + + +S+
Sbjct: 234 MNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSY 293
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM------PDYDKNVFVVTA------------- 243
++V++W MI G+V + + EA F+RM PD V++A
Sbjct: 294 RDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEI 353
Query: 244 ------------------MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+I + K G +++AR +F+R+ +D VS+ ++ YA
Sbjct: 354 HARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQV 413
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
E+ F M++ ++ + T + V ACS L G++ H V++ G A+++V NA+
Sbjct: 414 VESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNAL 473
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
++MY +CG + D+ F + ++V+WNT+I Q+G +AL + M G P+
Sbjct: 474 MSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNA 533
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
TF+++LSAC V E F M K YGI+P+ +HY C+VDIL+RAG L +A +
Sbjct: 534 ATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVIL 593
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
+P + +WG+LLAAC I+ NVE+GE AA+ +L+PQN+ +YV LS +YAAAGMWRD
Sbjct: 594 TIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRD 653
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
V ++R MKE+GV K+ SWIEI +VH F+ D SHP +I+ EL+ QMKS+
Sbjct: 654 VAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSL 711
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 182/394 (46%), Gaps = 44/394 (11%)
Query: 130 DAFDYFQAM-PERNTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGF 184
D Y P+ ++ Y ++ +K L ++ E + R NV +L +
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP----DYDKNVFV 240
G V++AR L D S K+VVSW VMI+GY EA LF M + DK FV
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 241 V---------------------------------TAMITGFCKVGMLENARLLFERIQPK 267
A+I+ + K G + +AR +F+ + +
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D VS+ + YA++G EE+L+ + M++ ++P T ++V +AC +L L +G+Q H
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
++ + + ++V V A+ MY +CG D+ F + ++++WNT+I F G E
Sbjct: 254 AHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLE 313
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+A F +M G PD T+ ++LSAC G + ++ K G++ L
Sbjct: 314 EAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAK-DGLVSDVRFGNAL 372
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+++ S+AG ++ A Q+ MP + D W +LL
Sbjct: 373 INMYSKAGSMKDARQVFDRMP-KRDVVSWTTLLG 405
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
Q D V + +C + L G+Q H ++R G + NV + N ++ +Y+ CG + ++
Sbjct: 25 QVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQ 84
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + + ++VSWN +I+ +A G ++A F+ M +PD TF+S+LSAC
Sbjct: 85 LFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAV 144
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+N ++ + V G+ + L+ + ++ G + A ++ M D W +L
Sbjct: 145 LNWGREI-HVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMA-SRDEVSWTTLT 202
Query: 481 AA 482
A
Sbjct: 203 GA 204
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 195/621 (31%), Positives = 326/621 (52%), Gaps = 59/621 (9%)
Query: 18 PPILRILSTPDSCGNFT----PHSSNCLIRLFSTQY-VFVNNAKISALSRAGKISAARQL 72
P + LS +C N++ + +++ + V V A I+ S+ G+IS A ++
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEV 214
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----PVKNIVSWNCMIAGCIDNDRI 128
F +MT ++V++W AII Q+ L E+ L++ M N V++ ++ C + +
Sbjct: 215 FHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL 274
Query: 129 DDAFDYFQAMPERNTAT----YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+ + ER T NA+I+ + K ++EA +F++M +R+VIS++AM+ G+
Sbjct: 275 NRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGY 334
Query: 185 MKKG-----EVDKARALSDYMS----FKNVVSW--------------------------- 208
+ G +D+ L + M F N V++
Sbjct: 335 AQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVG 394
Query: 209 --------TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
T + Y K EA ++F +M + KNV T+ ++ + K G L +A +
Sbjct: 395 FELDRSLQTAIFNMYAKCGSIYEAEQVFSKMAN--KNVVAWTSFLSMYIKCGDLSSAEKV 452
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F + ++ VS+N MIAGYAQNG + L S M QPD T++++ AC AL L
Sbjct: 453 FSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGL 512
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
G+ H ++ G E++ V ++I MYS+CG + ++ F ++ + + V+WN ++A +
Sbjct: 513 ERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGY 572
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
QHG +A+ F +M P+ IT +++SAC AG V E ++F +M + + + P
Sbjct: 573 GQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPR 632
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
+HY C+VD+L RAG+L++A + Q MP E D VW +LL AC + NV+L E AA +
Sbjct: 633 KQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHIL 692
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
EL+P ++VY+ LSN+YA AG W D T+VR +M ++G+ K S IEI ++H F+ D
Sbjct: 693 ELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAED 752
Query: 561 MSHPCIDKIHLELKRASVQMK 581
+HP ID IH EL+ + +MK
Sbjct: 753 CAHPEIDAIHAELETLTKEMK 773
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 238/483 (49%), Gaps = 52/483 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+++ N+ I+ S+ +++A Q+F +MT +DV+TW+++I Y N ++ + F+ M
Sbjct: 91 IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150
Query: 110 KNI----VSWNCMIAGCIDNDRIDDA---FDYFQAMP-ERNTATYNAMISGFLKHGRLEE 161
NI +++ ++ C + ++ +AM E + A A+I+ + K G +
Sbjct: 151 ANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISV 210
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM----SFKNVVSWTVMITGYVK 217
A +F +M RNV+S+TA++ + ++++A L + M N V++ ++
Sbjct: 211 ACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNT 270
Query: 218 NERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E R + + + + ++ V A+IT +CK ++ AR +F+R+ +D +S++AM
Sbjct: 271 PEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAM 330
Query: 276 IAGYAQNGVA-----EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
IAGYAQ+G +E +L M + + P+ T +S+ AC+A L +GRQ H +
Sbjct: 331 IAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAEL 390
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSEL------------------------------ 360
+ GFE + S+ A+ MY++CG I ++E
Sbjct: 391 SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAE 450
Query: 361 -AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F ++ + N+VSWN +IA +AQ+G K S M GF PD +T +++L ACG
Sbjct: 451 KVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALA 510
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ + VK+ G+ + T L+ + S+ GQ+ +A + M DT W ++
Sbjct: 511 GLERGKLVHAEAVKL-GLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-NRDTVAWNAM 568
Query: 480 LAA 482
LA
Sbjct: 569 LAG 571
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 202/427 (47%), Gaps = 53/427 (12%)
Query: 15 ILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
+ F +L +TP++ S+ R T + V NA I+ + + AR++FD
Sbjct: 259 VTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI-VANALITMYCKCNSVQEAREIFD 317
Query: 75 QMTTKDVITWNAIITGYWQNGF-----LQESKNLFQSMPVK----NIVSWNCMIAGCIDN 125
+M+ +DVI+W+A+I GY Q+G+ + E L + M + N V++ ++ C +
Sbjct: 318 RMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAH 377
Query: 126 DRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
++ + E + + A+ + + K G + EA ++F +M +NV+++T+ L
Sbjct: 378 GALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFL 437
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD-- 233
++K G++ A + M +NVVSW +MI GY +N + EL M PD
Sbjct: 438 SMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRV 497
Query: 234 -----------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERI 264
+ + V T++I + K G + AR +F+++
Sbjct: 498 TVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKM 557
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+D V++NAM+AGY Q+G EA+ LF M+K + P++ TL +V +ACS L+ EGR
Sbjct: 558 SNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGR 617
Query: 325 QSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQ 382
+ ++ + ++ + R G + ++E + + P++ W+ ++ A
Sbjct: 618 EIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKS 677
Query: 383 HGHYEKA 389
H + + A
Sbjct: 678 HNNVQLA 684
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 218/498 (43%), Gaps = 64/498 (12%)
Query: 92 WQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYN 147
+ +GF K L V W AG R+ +A + +R N+ TY
Sbjct: 6 YNDGFASTGKELDGPTSVSGGEVWRLCKAG-----RLREAIQLLGIIKQRGLLVNSNTYG 60
Query: 148 AMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
+I K R E+ + +Q+ ++ ++++ + K +V A + M+ +
Sbjct: 61 CVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLR 120
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPD------------------------------ 233
+VV+W+ MI Y N +A + F RM D
Sbjct: 121 DVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIH 180
Query: 234 -------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+ +V V TA+IT + K G + A +F ++ ++ VS+ A+I AQ+
Sbjct: 181 TIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLN 240
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
EA L+ M++ + P+ T VS+ +C+ + LN GR+ H + G E ++ V NA+I
Sbjct: 241 EAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALI 300
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI-----FFSQMGLNGF 401
TMY +C + ++ F ++ +++SW+ +IA +AQ G+ +K I +M G
Sbjct: 301 TMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGV 360
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
P+ +TF+S+L AC G + + + + KV G T + ++ ++ G + +A
Sbjct: 361 FPNKVTFMSILRACTAHGALEQGRQIHAELSKV-GFELDRSLQTAIFNMYAKCGSIYEAE 419
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGEL--AAKKMRELDPQNSAVYVMLSNLYAA 519
Q+ M + W S L+ + ++ G+L A K E+ +N + ++ YA
Sbjct: 420 QVFSKMA-NKNVVAWTSFLS-----MYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQ 473
Query: 520 AGMWRDVTRVRLLMKEQG 537
G V + MK +G
Sbjct: 474 NGDIVKVFELLSSMKAEG 491
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 199/612 (32%), Positives = 315/612 (51%), Gaps = 90/612 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTK---DVITWNAIITGYWQNGFLQESKNLFQS 106
VFV NA +S + G + A +FD + + D+++WN++++ Y + LF
Sbjct: 294 VFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHK 353
Query: 107 MPVKNIVSWNCM-----IAGC----------------IDNDRIDDAFDYFQAMPERNTAT 145
M ++++S + + + C I + +DD F
Sbjct: 354 MTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVF------------V 401
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN- 204
NA++ + K G++EEA ++F++M ++V+S+ AM+ G+ + G ++ A +L + M+ +N
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461
Query: 205 ---VVSWTVMITGYVKNERFCEARELFYRMPDYDK--NVFVVTAMITGFCKVGML----- 254
VV+WT +ITGY + + CEA ++F +M D NV + ++++ VG L
Sbjct: 462 ELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKE 521
Query: 255 --------------------------------------ENARLLFERIQPKD--CVSFNA 274
E AR +F+ + PKD V++
Sbjct: 522 THCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTV 581
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMD--MQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
MI GYAQ+G A AL+LFSGM KMD ++P+D TL AC+ L L GRQ H V+R
Sbjct: 582 MIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR 641
Query: 333 NGF-EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
N + + V N +I MYS+ G + +++ F + N VSW +++ + HG E AL
Sbjct: 642 NFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALR 701
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F +M PDGITFL +L AC H+G V+ ++ F M K +G+ P EHY C+VD+
Sbjct: 702 VFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLW 761
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
RAG+L +A ++ MP E VW +LL+AC ++ NVELGE AA ++ EL+ N Y
Sbjct: 762 GRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYT 821
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHL 571
+LSN+YA A W+DV R+R MK G+ K+ SWI+ V F GD SHP +I+
Sbjct: 822 LLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYE 881
Query: 572 ELKRASVQMKSV 583
L ++K++
Sbjct: 882 TLADLIQRIKAI 893
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 204/454 (44%), Gaps = 77/454 (16%)
Query: 7 FHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALS 61
FH+ + ++ P ++ +++ +C + + FS + VFV NA + +
Sbjct: 351 FHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYA 410
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNC 117
+ GK+ A ++F +M KDV++WNA++TGY Q G L+ + +LF+ M +NI V+W
Sbjct: 411 KCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTA 470
Query: 118 MIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMIS-----GFLKHGRLEE--ATRLF 166
+I G + +A D F+ M N T +++S G L HG+ A +
Sbjct: 471 VITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFI 530
Query: 167 EQM----PRRNVISY-TAMLDGFMKKGEVDKARALSDYMSFK--NVVSWTVMITGYVKNE 219
+ P + + ++D + K + AR + D +S K +VV+WTVMI GY ++
Sbjct: 531 LNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHG 590
Query: 220 RFCEARELFYRMPDYDKNV----------------------------------------F 239
A +LF M DK++ F
Sbjct: 591 DANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLF 650
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V +I + K G ++ A+++F+ + ++ VS+ +++ GY +G E+ALR+F M K+
Sbjct: 651 VANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVP 710
Query: 300 MQPDDATLVSVFTACSALQLLNEG-----RQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ PD T + V ACS +++ G R S + G E ++ ++ R G
Sbjct: 711 LVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYA----CMVDLWGRAGR 766
Query: 355 ILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ ++ +L P V W +++A H + E
Sbjct: 767 LGEAMKLINEMPMEPTPVVWVALLSACRLHSNVE 800
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 12/251 (4%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSF--NAMIAGYAQNGVAEEALRLFSGMIK 297
+ T +I + A LL ER+ P F N +I G + L+ M
Sbjct: 193 LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKS 252
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+ PD T VF AC+ L L+ G H V R+GF +NV VCNAV++MY +CG +
Sbjct: 253 LGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRH 312
Query: 358 S-----ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF-DPDGITFLSL 411
+ +L R I +LVSWN++++A+ AL F +M PD I+ +++
Sbjct: 313 AHNMFDDLCHRGIQ--DLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNI 370
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L AC + ++ G++ +VD+ ++ G++E+A ++ Q M F+
Sbjct: 371 LPACASLAASLRGRQVHGFSIRS-GLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFK- 428
Query: 472 DTGVWGSLLAA 482
D W +++
Sbjct: 429 DVVSWNAMVTG 439
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 198/621 (31%), Positives = 325/621 (52%), Gaps = 59/621 (9%)
Query: 18 PPILRILSTPDSCGNFT----PHSSNCLIRLFSTQY-VFVNNAKISALSRAGKISAARQL 72
P + LS +C N++ + +++ + V V A I+ S+ G+IS A ++
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEI 236
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----PVKNIVSWNCMIAGCIDNDRI 128
F +M ++V++W AII Q+ L E+ L++ M N V++ ++ C + +
Sbjct: 237 FQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296
Query: 129 DDAFDYFQAMPERNTAT----YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+ + ER T NA+I+ + K +++A F++M +R+VIS++AM+ G+
Sbjct: 297 NRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGY 356
Query: 185 MKKGEVDKAR-----ALSDYMS----FKNVVSW--------------------------- 208
+ G DK L + M F N V++
Sbjct: 357 AQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVG 416
Query: 209 --------TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
T + Y K EA ++F +M + KNV +++T + K G L +A +
Sbjct: 417 FESDRSLQTAIFNMYAKCGSIYEAEQVFSKMEN--KNVVAWASLLTMYIKCGDLTSAEKV 474
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F + ++ VS+N MIAGYAQ+G + L S M QPD T++S+ AC AL L
Sbjct: 475 FSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSAL 534
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
G+ H ++ G E++ V ++I MYS+CG + ++ F +I + + V+WN ++A +
Sbjct: 535 ERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGY 594
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
QHG +A+ F +M P+ ITF +++SACG AG V E ++F +M + + + P
Sbjct: 595 GQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPG 654
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
+HY C+VD+L RAG+L++A + Q MP E D VW +LL AC + NV+L E AA +
Sbjct: 655 KQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHIL 714
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
L+P N++VYV LSN+YA AG W D T+VR +M ++G+ K S IEI ++H F+ D
Sbjct: 715 RLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAED 774
Query: 561 MSHPCIDKIHLELKRASVQMK 581
+HP ID IH EL+ + +MK
Sbjct: 775 CAHPEIDSIHAELEMLTKEMK 795
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 263/537 (48%), Gaps = 53/537 (9%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+++ N+ I+ S+ G +++ Q+F +MT +DV+TW+++I Y N ++ + F+ M
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEE 161
NI +++ ++ C + ++ A + + E + A A+I+ + K G +
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISL 232
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM----SFKNVVSWTVMITGYVK 217
A +F++M RNV+S+TA++ + ++++A L + M N V++ ++
Sbjct: 233 ACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT 292
Query: 218 NERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E R + + + + +V V A+IT +CK +++AR F+R+ +D +S++AM
Sbjct: 293 PEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAM 352
Query: 276 IAGYAQNGVA-----EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
IAGYAQ+G +E +L M + + P+ T +S+ ACS L +GRQ H +
Sbjct: 353 IAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI 412
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP---------------------- 368
+ GFE++ S+ A+ MY++CG I ++E F ++ +
Sbjct: 413 SKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAE 472
Query: 369 ---------NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
N+VSWN +IA +AQ G K S M + GF PD +T +S+L ACG
Sbjct: 473 KVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALS 532
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ + VK+ G+ + T L+ + S+ G++ +A + + DT W ++
Sbjct: 533 ALERGKLVHAEAVKL-GLESDTVVATSLIGMYSKCGEVTEARTVFDKIS-NRDTVAWNAM 590
Query: 480 LAACVIN-LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
LA + + E +L + ++E P N + + + AG+ ++ + +M+E
Sbjct: 591 LAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQE 647
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 234/532 (43%), Gaps = 75/532 (14%)
Query: 86 AIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER---- 141
A+ + + NGF + L V W AG R+ +A + +R
Sbjct: 22 AMTSIVYNNGFASTGEELAGPRSVSGGEVWRLCKAG-----RLKEAIQLLGIIKQRGLLV 76
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALS 197
N+ TY +I K R E+ + +Q+ ++ ++++ + K G+V +
Sbjct: 77 NSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVF 136
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD------------------------ 233
M+ ++VV+W+ MI Y N +A + F RM D
Sbjct: 137 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLE 196
Query: 234 -------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
+ +V V TA+IT + K G + A +F++++ ++ VS+ A+I A
Sbjct: 197 KAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANA 256
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
Q+ EA L+ M++ + P+ T VS+ +C+ + LN GR+ H + G E +V
Sbjct: 257 QHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVV 316
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI-----FFSQ 395
V NA+ITMY +C I D+ F ++ +++SW+ +IA +AQ G+ +K + +
Sbjct: 317 VANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLER 376
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G P+ +TF+S+L AC G + + + + KV G T + ++ ++ G
Sbjct: 377 MRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKV-GFESDRSLQTAIFNMYAKCG 435
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL--AAKKMRELDPQNSAVYVML 513
+ +A Q+ M + W SLL + ++ G+L A K E+ +N + ++
Sbjct: 436 SIYEAEQVFSKME-NKNVVAWASLL-----TMYIKCGDLTSAEKVFSEMSTRNVVSWNLM 489
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQG----------VTKQC-AYSWIEIGNKVH 554
YA +G V + MK +G + + C A S +E G VH
Sbjct: 490 IAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVH 541
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 224/471 (47%), Gaps = 58/471 (12%)
Query: 15 ILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
+ F +L +TP++ S+ R T V V NA I+ + I AR+ FD
Sbjct: 281 VTFVSLLNSCNTPEALNRGRRIHSHISERGLETD-VVVANALITMYCKCNCIQDARETFD 339
Query: 75 QMTTKDVITWNAIITGYWQNGF-----LQESKNLFQSMPVKNI---------VSWNCMIA 120
+M+ +DVI+W+A+I GY Q+G+ L E L + M + + + C +
Sbjct: 340 RMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVH 399
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
G ++ R A + + E + + A+ + + K G + EA ++F +M +NV+++ ++
Sbjct: 400 GALEQGRQIHA-EISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASL 458
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD- 233
L ++K G++ A + MS +NVVSW +MI GY ++ + EL M PD
Sbjct: 459 LTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDR 518
Query: 234 ------------------------------YDKNVFVVTAMITGFCKVGMLENARLLFER 263
+ + V T++I + K G + AR +F++
Sbjct: 519 VTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDK 578
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
I +D V++NAM+AGY Q+G+ EA+ LF M+K + P++ T +V +AC L+ EG
Sbjct: 579 ISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEG 638
Query: 324 RQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFA 381
R+ ++ + + ++ + R G + ++E +++ P++ W+ ++ A
Sbjct: 639 REIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACK 698
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGIT-FLSLLSACGHAGKVNESMDLFELM 431
H + + L ++ + +P + +++L + AG+ ++S + ++M
Sbjct: 699 SHDNVQ--LAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVM 747
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 201/632 (31%), Positives = 317/632 (50%), Gaps = 111/632 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+ N ++ ++ G I A ++FD+M K V +WN I++GY + G L+E+ +F+ MP
Sbjct: 48 VFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPE 107
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTAT------------------ 145
+ VSW MI G + ++A F+ M P + T T
Sbjct: 108 PDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKV 167
Query: 146 ---------------YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
N++++ + K G A +F++M ++ S+ M+ M+ G V
Sbjct: 168 HSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLV 227
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------PD---------- 233
D A+ + M ++VVSW MI+GY ++ EA ++F +M PD
Sbjct: 228 DLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSA 287
Query: 234 ---------------------YDKNVFVVTAMITGFCKVGMLENA--------------- 257
+D V A+I+ + K G +E A
Sbjct: 288 CANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVI 347
Query: 258 ------------------RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
R +F+ ++ +D V++ AMI GY QNG ++A+ LF MIK
Sbjct: 348 AFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEG 407
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+P++ TL ++ + S+L L+ GRQ H R+G ++VSV NA+ITMY++ G I D+
Sbjct: 408 PKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDAR 467
Query: 360 LAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F IH + ++W ++I A AQHG E+AL F +M NG PD IT++ +LSAC H
Sbjct: 468 WVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHV 527
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V + + LM + IIP+ HY C++D+ RAG L++A + MP E D WGS
Sbjct: 528 GLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGS 587
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LLA+C ++ NVEL E+AA+++ ++P+NS Y L+N+Y+A G W + +R MK++GV
Sbjct: 588 LLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGV 647
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
K +SW++I NKVH F D HP D I+
Sbjct: 648 KKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIY 679
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 148/577 (25%), Positives = 264/577 (45%), Gaps = 137/577 (23%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
+ Y+ V N+ ++ +++G A+ +FD+M K +WN +I+ + Q+G + ++ F+
Sbjct: 177 SSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQ 236
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNT---------------- 143
M +++VSWN MI+G + +A D F M P++ T
Sbjct: 237 MIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKL 296
Query: 144 -----------------ATYNAMISGFLKHGRLEEATRLFEQ--MPRRNVISYTAMLDGF 184
A NA+IS + K G +E A ++ EQ + +VI++TA+LDG+
Sbjct: 297 GKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGY 356
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------- 231
+K G+++ AR + D + ++VV+WT MI GYV+N +A ELF M
Sbjct: 357 VKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLA 416
Query: 232 -----------PDYDK-------------NVFVVTAMITGFCKVGMLENARLLFERIQ-P 266
D+ + +V V A+IT + K G + +AR +F I
Sbjct: 417 TMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWK 476
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+D +++ +MI AQ+G+ EEAL LF M++ ++PD T V V +AC+ + L+ +GR
Sbjct: 477 RDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSY 536
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
+ L+ + A + I +P+ + +I F + G
Sbjct: 537 YNLM----------------------------QNAHKIIPTPS--HYACMIDLFGRAGLL 566
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII--PSSEHY 444
++A F M + +PD I + SLL++C KV+++++L E+ + +I +S Y
Sbjct: 567 QEAHAFIENMPI---EPDVIAWGSLLASC----KVHKNVELAEVAAERLLLIEPENSGAY 619
Query: 445 TCLVDILSRAGQLEKAWQITQGMP---FEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
+ L ++ S GQ E A I + M + D G + V V+ G
Sbjct: 620 SALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDG--------- 670
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
L PQ A+Y M+ A +W+++ ++ + + V
Sbjct: 671 LHPQRDAIYEMM------AKIWKEIKKMGFVPDTESV 701
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 137/324 (42%), Gaps = 47/324 (14%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNL 103
+ S V A + + G I+ AR++FD + +DV+ W A+I GY QNGF Q++ L
Sbjct: 340 MISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMEL 399
Query: 104 FQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEAT 163
F+SM + N +A + + D+ + + T + NA
Sbjct: 400 FRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNA--------------- 444
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMITGYVKNERFC 222
+V A++ + K G ++ AR + + + +K + ++WT MI ++
Sbjct: 445 --------SSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGE 496
Query: 223 EARELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV-----S 271
EA LF RM PD+ V V++A VG++E R + +Q +
Sbjct: 497 EALTLFERMLENGIKPDHITYVGVLSAC----THVGLVEQGRSYYNLMQNAHKIIPTPSH 552
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ--LLNEGRQSHVL 329
+ MI + + G+ +EA M ++PD S+ +C + L E +L
Sbjct: 553 YACMIDLFGRAGLLQEAHAFIE---NMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLL 609
Query: 330 VIRNGFEANVSVCNAVITMYSRCG 353
+I N +A+ +YS CG
Sbjct: 610 LIE---PENSGAYSALANVYSACG 630
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 261/443 (58%), Gaps = 3/443 (0%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T NA+I + K+ L +A ++F++M R+V+S+ + +++GEVD AR++ D M
Sbjct: 235 DTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMP 294
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
K+ VSW M+ GY K +A ELF RMP +NV + +++ +CK G +E AR++F
Sbjct: 295 EKDTVSWNTMLDGYAKAGEAEKAFELFQRMPG--RNVVSWSTVVSAYCKKGDMEMARVIF 352
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+++ K+ V++ M++ AQ G+ EEA RLF+ M+ ++ D +VS+ AC+ L
Sbjct: 353 DKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLA 412
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF-RQIHSPNLVSWNTIIAAF 380
G++ H V + + VCNA++ M+ +CG + ++ F +I +LVSWN II F
Sbjct: 413 LGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGF 472
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A HG EKAL F+QM GF PD +T +++LSAC H G V E F M YGI P
Sbjct: 473 AMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQ 532
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
EHY C+VD+L R G +++A + + MP+E + +WGSLL+AC ++ NVE ELA ++
Sbjct: 533 IEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVNELS 592
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
L P ++ Y +LSN+YA AG W D+ + R+ MK G K SWIE+ H F GD
Sbjct: 593 NLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTVGD 652
Query: 561 MSHPCIDKIHLELKRASVQMKSV 583
HP D+I + R S +K V
Sbjct: 653 RKHPESDQISDMIDRLSSHVKFV 675
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 206/382 (53%), Gaps = 11/382 (2%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L S + FV NA I A S+ +S A+++FD+MTT+DV++WN + + G + +
Sbjct: 227 VVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAA 286
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+++F MP K+ VSWN M+ G + AF+ FQ MP RN +++ ++S + K G +E
Sbjct: 287 RSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDME 346
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-RALSDYMSFK---NVVSWTVMITGYV 216
A +F++MP +N++++T M+ +KG V++A R ++ M +V++ ++
Sbjct: 347 MARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACA 406
Query: 217 KNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE-RIQPKDCVSFN 273
++ + + R ++ V A++ FCK G + A +F+ I KD VS+N
Sbjct: 407 ESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWN 466
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV-LVIR 332
+I G+A +G E+AL LF+ M + PD TL++V +AC+ + L+ EGR+ +
Sbjct: 467 IIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETD 526
Query: 333 NGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
G + + ++ + R G I ++ ++ R PN V W ++++A H + E A +
Sbjct: 527 YGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAEL 586
Query: 392 FFSQMGLNGFDPDGITFLSLLS 413
++ L+ P ++LS
Sbjct: 587 AVNE--LSNLQPSSAGNYAVLS 606
>gi|302784086|ref|XP_002973815.1| hypothetical protein SELMODRAFT_100620 [Selaginella moellendorffii]
gi|300158147|gb|EFJ24770.1| hypothetical protein SELMODRAFT_100620 [Selaginella moellendorffii]
Length = 564
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 281/500 (56%), Gaps = 36/500 (7%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N ++A +RAG + + LF M + ++TWN+I+ Y NG L +K LF +MP +
Sbjct: 58 NTLLTAYARAGHMPESELLFKNMPERGIVTWNSIVEAYAHNGLLARAKTLFDAMPERTAY 117
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFE------ 167
SWN MI G +DN R A F+ MP+R+TA++N +++G + G L EA R+FE
Sbjct: 118 SWNIMIQGYVDNSRFQSALAAFERMPQRSTASWNTVLAGLVAAGHLREAERVFEATPHRD 177
Query: 168 -------------------------QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
++P RN + + A+L +++ G++ A+A D
Sbjct: 178 LHAHNTMVSAYCKAGALHRARDVFDKVPHRNFVCWNALLQAYVQNGQLSTAKATFDVSPC 237
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
++V SW M+ G+ + + +A LF RMP D V TA++ + + G + AR LF+
Sbjct: 238 RDVASWNAMMQGFAEEGQLQDAELLFQRMPKRD--VVSATALVVAYARHGHITQARALFD 295
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ +D +++NAMIA Y Q G+A +AL LF M + D A+L S AC+ L L E
Sbjct: 296 GLPVRDTIAWNAMIAAYTQAGLALDALNLFKVMDLEAVPLDHASLSSALDACATLAALRE 355
Query: 323 GRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G+ H ++ + F +N V ++ITMY+RC + +++ AF + ++ WNT++AA++
Sbjct: 356 GKLIHSSILHSELFHSNTIVATSLITMYARCARLCEAKRAFDGLTKRDVPCWNTMVAAYS 415
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL--MVKVYGIIP 439
Q+G ++++L F M + G P +F+ +L++C H G + E++ F +V+ +G++P
Sbjct: 416 QNGLFQESLEIFRTMEVEGHKPQSASFICILTSCSHGGLLTEALWYFTALQLVEDHGVVP 475
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+ +HY C++D+L+R G L +A ++ MPFE D+ W +LL C +V+ G AK +
Sbjct: 476 TVDHYICIIDLLARIGWLHQAEELLNTMPFEPDSVAWMALLGGCKGQNDVQTGARVAKHV 535
Query: 500 RELDPQNSAVYVMLSNLYAA 519
+L P+ A+YV+LSN +A+
Sbjct: 536 FQLQPRTPALYVLLSNTHAS 555
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 192/429 (44%), Gaps = 54/429 (12%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI 150
Y G L +++ F + N SWN +I N +I A D F MP R + T+N ++
Sbjct: 2 YGACGSLDDARTAFDRLAHPNAFSWNILILAYAQNGQIPLARDAFDRMPARTSVTWNTLL 61
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
+ + + G + E+ LF+ MP R ++++ ++++ + G + +A+ L D M + SW +
Sbjct: 62 TAYARAGHMPESELLFKNMPERGIVTWNSIVEAYAHNGLLARAKTLFDAMPERTAYSWNI 121
Query: 211 MITGYVKNERFCEARELFYRMPDYD--------------------KNVFVVT-------- 242
MI GYV N RF A F RMP + VF T
Sbjct: 122 MIQGYVDNSRFQSALAAFERMPQRSTASWNTVLAGLVAAGHLREAERVFEATPHRDLHAH 181
Query: 243 -AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
M++ +CK G L AR +F+++ ++ V +NA++ Y QNG +L + D+
Sbjct: 182 NTMVSAYCKAGALHRARDVFDKVPHRNFVCWNALLQAYVQNG------QLSTAKATFDVS 235
Query: 302 P--DDATLVSVFTACSALQLLNEGR-QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
P D A+ ++ EG+ Q L+ + + +V A++ Y+R G I +
Sbjct: 236 PCRDVASWNAMMQG-----FAEEGQLQDAELLFQRMPKRDVVSATALVVAYARHGHITQA 290
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG-- 416
F + + ++WN +IAA+ Q G AL F M L D + S L AC
Sbjct: 291 RALFDGLPVRDTIAWNAMIAAYTQAGLALDALNLFKVMDLEAVPLDHASLSSALDACATL 350
Query: 417 ---HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
GK+ S L + I+ +S L+ + +R +L +A + G+ + D
Sbjct: 351 AALREGKLIHSSILHSELFHSNTIVATS-----LITMYARCARLCEAKRAFDGLT-KRDV 404
Query: 474 GVWGSLLAA 482
W +++AA
Sbjct: 405 PCWNTMVAA 413
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 168/346 (48%), Gaps = 25/346 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ +N +SA +AG + AR +FD++ ++ + WNA++ Y QNG L +K F P
Sbjct: 178 LHAHNTMVSAYCKAGALHRARDVFDKVPHRNFVCWNALLQAYVQNGQLSTAKATFDVSPC 237
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+++ SWN M+ G + ++ DA FQ MP+R+ + A++ + +HG + +A LF+ +
Sbjct: 238 RDVASWNAMMQGFAEEGQLQDAELLFQRMPKRDVVSATALVVAYARHGHITQARALFDGL 297
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV--------------VSWTVMITGY 215
P R+ I++ AM+ + + G A L M + V + + G
Sbjct: 298 PVRDTIAWNAMIAAYTQAGLALDALNLFKVMDLEAVPLDHASLSSALDACATLAALREGK 357
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ + + ELF+ N V T++IT + + L A+ F+ + +D +N M
Sbjct: 358 LIHSSILHS-ELFH------SNTIVATSLITMYARCARLCEAKRAFDGLTKRDVPCWNTM 410
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR---QSHVLVIR 332
+A Y+QNG+ +E+L +F M +P A+ + + T+CS LL E + LV
Sbjct: 411 VAAYSQNGLFQESLEIFRTMEVEGHKPQSASFICILTSCSHGGLLTEALWYFTALQLVED 470
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTII 377
+G V +I + +R G + +E + P+ V+W ++
Sbjct: 471 HGVVPTVDHYICIIDLLARIGWLHQAEELLNTMPFEPDSVAWMALL 516
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
HSS LF + + V + I+ +R ++ A++ FD +T +DV WN ++ Y QNG
Sbjct: 360 HSSILHSELFHSNTI-VATSLITMYARCARLCEAKRAFDGLTKRDVPCWNTMVAAYSQNG 418
Query: 96 FLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-------ERNTA 144
QES +F++M V+ S+ C++ C + +A YF A+
Sbjct: 419 LFQESLEIFRTMEVEGHKPQSASFICILTSCSHGGLLTEALWYFTALQLVEDHGVVPTVD 478
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEV 190
Y +I + G L +A L MP + +++ A+L G + +V
Sbjct: 479 HYICIIDLLARIGWLHQAEELLNTMPFEPDSVAWMALLGGCKGQNDV 525
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY CG + D+ AF ++ PN SWN +I A+AQ+G A F +M +T
Sbjct: 1 MYGACGSLDDARTAFDRLAHPNAFSWNILILAYAQNGQIPLARDAFDRMPAR----TSVT 56
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+ +LL+A AG + ES LF+ M + GI+ + +V+ + G L +A + M
Sbjct: 57 WNTLLTAYARAGHMPESELLFKNMPE-RGIVT----WNSIVEAYAHNGLLARAKTLFDAM 111
Query: 468 PFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY--VMLSNLYAAAGMWRD 525
P E W ++ V N + A ++M PQ S +L+ L AAG R+
Sbjct: 112 P-ERTAYSWNIMIQGYVDNSRFQSALAAFERM----PQRSTASWNTVLAGL-VAAGHLRE 165
Query: 526 VTRV 529
RV
Sbjct: 166 AERV 169
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 195/532 (36%), Positives = 298/532 (56%), Gaps = 14/532 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQESKN---L 103
F+ NA I + S + A LF M D +++ I+ + ++E K L
Sbjct: 91 FLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEGKQIHGL 150
Query: 104 FQSMPV-KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
+ + N+ NC+IA + I+ A F MP +++ +YN+MI G++K G ++ A
Sbjct: 151 LMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLA 210
Query: 163 TRLFEQMP--RRNVISYTAMLDGFMK-KGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
LF+ MP +N+IS+ +ML GF + K + A L + M +++VSW +I G+ K
Sbjct: 211 RELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMPERDLVSWNTIIGGFAKCG 270
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
R A LF RMP D V + MI G+ K+G ++ AR LF+ + KD V+FN ++AGY
Sbjct: 271 RIEFAHSLFNRMPKRD--VISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGY 328
Query: 280 AQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
AQNG EAL +F M + ++ PD+ TLV +A S L + + H + NG
Sbjct: 329 AQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFLENGISVT 388
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V A+I MYS+CG I ++ L F + + WN +I+ A++G + A +M
Sbjct: 389 GKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHR 448
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
PDGITF+ +L+AC HAG V E + FELM KV+ + P +HY C+VDIL +AG +E
Sbjct: 449 LSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVE 508
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
A + + MP E + +W +LL+AC + N +GEL AK + +D NS+ YV+LSN+YA
Sbjct: 509 GALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGELIAKHLMTMDSCNSSSYVLLSNIYA 568
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
G+W ++VR++MK+Q +TK SWIE+ VH FL D SHP + +I+
Sbjct: 569 RLGLWSAASKVRMMMKKQNLTKVPGCSWIELEGVVHEFLVRDKSHPYVSEIY 620
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 238/482 (49%), Gaps = 84/482 (17%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L++L +F+ N I+ R G I ARQ+FD+M +D +++N++I GY ++G + +
Sbjct: 151 LMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLA 210
Query: 101 KNLFQSMPV--KNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
+ LF SMP+ KN++SWN M+ G D I A + F+ MPER+ ++N +I GF K G
Sbjct: 211 RELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMPERDLVSWNTIIGGFAKCG 270
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
R+E A LF +MP+R+VIS++ M+DG+ K G++ AR L D M K+VV++ ++ GY +
Sbjct: 271 RIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQ 330
Query: 218 NERFCEARELFYRM-------PDYD---------------------KNVF---------- 239
N + EA E+F+ M PD N F
Sbjct: 331 NGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFLENGISVTGK 390
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V A+I + K G +ENA L+F+ + K +NAMI+G A+NG+ + A + M ++
Sbjct: 391 VAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHRLS 450
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++PD T + V AC+ L+ EG +C ++
Sbjct: 451 VKPDGITFIGVLNACAHAGLVKEGL----------------ICFELM------------- 481
Query: 360 LAFRQIH--SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
R++H P L + ++ + G E AL F +M + +P+ I + +LLSAC +
Sbjct: 482 ---RKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPI---EPNDIIWRTLLSACQN 535
Query: 418 AGKVNESMDLFELMVKVYGIIPS--SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+E+ + EL+ K + S S Y L +I +R G A ++ M + T V
Sbjct: 536 ----HENFTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKV 591
Query: 476 WG 477
G
Sbjct: 592 PG 593
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 261/443 (58%), Gaps = 3/443 (0%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T NA+I + K+ L +A ++F++M R+V+S+ + +++GEVD AR++ D M
Sbjct: 163 DTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMP 222
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
K+ VSW M+ GY K +A ELF RMP +NV + +++ +CK G +E AR++F
Sbjct: 223 EKDTVSWNTMLDGYAKAGEAEKAFELFQRMPG--RNVVSWSTVVSAYCKKGDMEMARVIF 280
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+++ K+ V++ M++ AQ G+ EEA RLF+ M+ ++ D +VS+ AC+ L
Sbjct: 281 DKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLA 340
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF-RQIHSPNLVSWNTIIAAF 380
G++ H V + + VCNA++ M+ +CG + ++ F +I +LVSWN II F
Sbjct: 341 LGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGF 400
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A HG EKAL F+QM GF PD +T +++LSAC H G V E F M YGI P
Sbjct: 401 AMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQ 460
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
EHY C+VD+L R G +++A + + MP+E + +WGSLL+AC ++ NVE ELA ++
Sbjct: 461 IEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVNELS 520
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
L P ++ Y +LSN+YA AG W D+ + R+ MK G K SWIE+ H F GD
Sbjct: 521 NLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTVGD 580
Query: 561 MSHPCIDKIHLELKRASVQMKSV 583
HP D+I + R S +K V
Sbjct: 581 RKHPESDQISDMIDRLSSHVKFV 603
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 206/382 (53%), Gaps = 11/382 (2%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L S + FV NA I A S+ +S A+++FD+MTT+DV++WN + + G + +
Sbjct: 155 VVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAA 214
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+++F MP K+ VSWN M+ G + AF+ FQ MP RN +++ ++S + K G +E
Sbjct: 215 RSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDME 274
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-RALSDYMSFK---NVVSWTVMITGYV 216
A +F++MP +N++++T M+ +KG V++A R ++ M +V++ ++
Sbjct: 275 MARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACA 334
Query: 217 KNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE-RIQPKDCVSFN 273
++ + + R ++ V A++ FCK G + A +F+ I KD VS+N
Sbjct: 335 ESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWN 394
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV-LVIR 332
+I G+A +G E+AL LF+ M + PD TL++V +AC+ + L+ EGR+ +
Sbjct: 395 IIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETD 454
Query: 333 NGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
G + + ++ + R G I ++ ++ R PN V W ++++A H + E A +
Sbjct: 455 YGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAEL 514
Query: 392 FFSQMGLNGFDPDGITFLSLLS 413
++ L+ P ++LS
Sbjct: 515 AVNE--LSNLQPSSAGNYAVLS 534
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/543 (33%), Positives = 289/543 (53%), Gaps = 49/543 (9%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ A++ Y + + + +F+ MP +++V+WN M+AG + + D M
Sbjct: 163 DLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQ 222
Query: 140 ER---NTATYNAMISGFLKHGRLEEATRLFEQMPRR--------NVISYTAMLDGFMKKG 188
+ N +T A++ +HG L + + R V+ TA+LD + K G
Sbjct: 223 DDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCG 282
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM---------PDYDKNVF 239
+ A + + M+ +N V+W+ ++ G+V R EA LF M P +
Sbjct: 283 HLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASAL 342
Query: 240 VVTAMITGFC-----------------------------KVGMLENARLLFERIQPKDCV 270
A ++ C K G+++ A LF+++ KD V
Sbjct: 343 RACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTV 402
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S++A+++GY QNG A+EA R+F M ++QPD AT+VS+ ACS L L G+ H V
Sbjct: 403 SYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSV 462
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
I G + S+CNA+I MY++CG I S F + + ++VSWNT+IA + HG ++A
Sbjct: 463 IVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEAT 522
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F M +PD +TF+ L+SAC H+G V E F +M YGI P EHY +VD+
Sbjct: 523 ALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDL 582
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L+R G L++A+Q QGMP +AD VWG+LL AC ++ N++LG+ + +++L P+ + +
Sbjct: 583 LARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNF 642
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V+LSN+++AAG + + VR++ KEQG K SWIEI +H F+GGD SH +I+
Sbjct: 643 VLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIY 702
Query: 571 LEL 573
EL
Sbjct: 703 QEL 705
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 156/362 (43%), Gaps = 18/362 (4%)
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN------VVSWTV 210
G L A LF+Q+P + Y A++ + +G R + + +
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ + R A ++FV TA++ + K +A +F R+ +D V
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++NAM+AGYA +G + + +++ D P+ +TLV++ + L++GR H
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYS 255
Query: 331 IR----NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
+R + + V V A++ MY++CG ++ + F + N V+W+ ++ F G
Sbjct: 256 VRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRM 315
Query: 387 EKALIFFSQM---GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
+A F M GL P + S L AC + + L L+ K G+
Sbjct: 316 LEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAK-SGLHTDLTA 372
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
L+ + ++AG +++A + M + DT + +L++ V N + +KM+ +
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVK-DTVSYSALVSGYVQNGKADEAFRVFRKMQACN 431
Query: 504 PQ 505
Q
Sbjct: 432 VQ 433
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 204/633 (32%), Positives = 326/633 (51%), Gaps = 71/633 (11%)
Query: 17 FPPILRILSTPDS--CGNFTPHSSNCLIRLFS-TQYVFVNNAKISALSRAGKISAARQLF 73
FP + + S CG+ SS+ L R+ VFV NA ++ SR G +S AR++F
Sbjct: 130 FPFVFKACGEISSVRCGD----SSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVF 185
Query: 74 DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP------------------------- 108
D+M DV++WN+II Y + G + + +F M
Sbjct: 186 DEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTR 245
Query: 109 ---------------VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
++N+ NC++ +D+A F MP ++ ++NAM++G+
Sbjct: 246 SLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGY 305
Query: 154 LKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NV 205
+ GR E+A RLFEQM + +V++++A + G+ ++G +A + M N
Sbjct: 306 SQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDY----------DKNVFVVTAMITGFCKVGMLE 255
V+ +++G +E+ Y D+N+ V+ +I + K ++
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENM-VINQLIDMYAKCKKVD 424
Query: 256 NARLLFERIQPK--DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ--PDDATLVSVF 311
AR +F+ + PK D V++ MI GY+Q+G A +AL L S M + D Q P+ T+
Sbjct: 425 IARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEA-NVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
AC++L L+ G+Q H +RN A + V N +I MY++CG I D+ L F + N
Sbjct: 485 VACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNE 544
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
V+W +++ + HG+ E+AL F +M GF DG+T L +L AC H+G +++ M+ F
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M +G+ P EHY CLVD+L RAG+L A ++ + MP E VW +LL+ C I+ VE
Sbjct: 605 MKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVE 664
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
LGE AAKK+ EL N Y +LSN+YA AG W+DVTR+R LM+ +G+ K+ SW+E
Sbjct: 665 LGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGI 724
Query: 551 NKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
F GD +HP +I+ L ++K +
Sbjct: 725 KGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDI 757
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 209/506 (41%), Gaps = 98/506 (19%)
Query: 57 ISALSRAGKISAARQLFDQMTTKD--VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
IS G +S A L + D V WN++I Y NG + S + + +S
Sbjct: 66 ISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNG---RANKCLSSFCLMHSLS 122
Query: 115 WNC---------MIAGCIDNDRIDDAFDYFQAMPE--RNTATYNAMISGFLKHGRLEEAT 163
W G I + R D+ + N NA+++ + + G L +A
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDAR 182
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS---------------------- 201
++F++MP +V+S+ ++++ + K G+ A + M+
Sbjct: 183 KVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASV 242
Query: 202 ------------------FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTA 243
+N+ ++ Y K EA +F MP K+V A
Sbjct: 243 GTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMP--VKDVVSWNA 300
Query: 244 MITGFCKVGMLENARLLFERIQPK----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
M+ G+ ++G E+A LFE++Q + D V+++A I+GYAQ G+ EAL + M+
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVI-------RNGFEANVSVCNAVITMYSRC 352
++P++ TL+SV + C+++ L G++ H I +NG V N +I MY++C
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKC 420
Query: 353 GGILDSELAFRQIHSP---NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD--PDGIT 407
+ + F + SP ++V+W +I ++QHG KAL S+M P+ T
Sbjct: 421 KKVDIARAMFDSL-SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 408 FLSLLSACG-----------HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
L AC HA + + L V CL+D+ ++ G
Sbjct: 480 ISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVS-----------NCLIDMYAKCGD 528
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAA 482
+ A + M E + W SL+
Sbjct: 529 IGDARLVFDNM-MEKNEVTWTSLMTG 553
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 128/252 (50%), Gaps = 17/252 (6%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDC--VSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ + +I+ + +G L +A L R P D +N++I Y NG A + L F M
Sbjct: 61 LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHS 120
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+ PD+ T VF AC + + G SH L GF +NV V NA++ MYSRCG + D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSD 180
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSACG 416
+ F ++ ++VSWN+II ++A+ G + AL FS+M GF PD IT +++L C
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHY------TCLVDILSRAGQLEKAWQITQGMPFE 470
G + L + +G +SE CLVD+ ++ G +++A + MP +
Sbjct: 241 SVGTRS-------LGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVK 293
Query: 471 ADTGVWGSLLAA 482
D W +++A
Sbjct: 294 -DVVSWNAMVAG 304
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 155/316 (49%), Gaps = 19/316 (6%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRN--VISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
+IS ++ G L A L + P + V + +++ + G +K LS + + +
Sbjct: 65 LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKC--LSSF-CLMHSL 121
Query: 207 SWT---------VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENA 257
SWT G + + R ++ R+ + NVFV A++ + + G L +A
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDA 181
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSA 316
R +F+ + D VS+N++I YA+ G + AL +FS M + +PDD TLV+V C++
Sbjct: 182 RKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCAS 241
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
+ + G+Q H + + N+ V N ++ MY++ G + ++ F + ++VSWN +
Sbjct: 242 VGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAM 301
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
+A ++Q G +E A+ F QM D +T+ + +S G E++ + M+ G
Sbjct: 302 VAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-G 360
Query: 437 IIPSSEHYTCLVDILS 452
I P+ L+ +LS
Sbjct: 361 IKPNE---VTLISVLS 373
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 209/649 (32%), Positives = 318/649 (48%), Gaps = 124/649 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
VFV ++ I + G +S A+ LFD + KD + WN ++ GY +NG + +F M
Sbjct: 93 VFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRH 152
Query: 108 -PVK-NIVSWNCMIAGCIDNDRID-----------------------------------D 130
+K N V++ C+++ C +D
Sbjct: 153 SEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQA 212
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM----------------PRRN- 173
A F +P+ + ++N +ISG++++G + EA LF M P N
Sbjct: 213 ARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNE 272
Query: 174 -------------VISYTAMLDGFMKKGEVD----------KARALSDYMSFKNVVSWTV 210
+I + +LD F+K +D + L SF VV T
Sbjct: 273 LLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVC-TT 331
Query: 211 MITGYVKNERFCEARELFY-----RM-----------PDY-------------------- 234
MI+GYV N + EA E F RM P +
Sbjct: 332 MISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK 391
Query: 235 -DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D+ V +A++ + K G L+ A +F RI KD + +N+MI +QNG EA+ LF
Sbjct: 392 LDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFR 451
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + D ++ +AC+ L L+ G++ H L+I+ +++ +++I MY++CG
Sbjct: 452 QMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCG 511
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ S F ++ N VSWN+II+A+ HG ++ L F +M NG PD +TFL ++S
Sbjct: 512 NLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIIS 571
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
ACGHAG+V+E + + LM + YGI EHY C+ D+ RAG+L +A++ MPF D
Sbjct: 572 ACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDA 631
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
GVWG+LL AC I+ NVEL E+A+K + +LDP NS YV+L+N+ A AG WR V +VR +M
Sbjct: 632 GVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIM 691
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP-------CIDKIHLELKR 575
KE+GV K YSWIE+ N H F+ D SHP +D + LELK+
Sbjct: 692 KERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKK 740
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 211/451 (46%), Gaps = 51/451 (11%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
+DV +++I Y +NG L +++ LF ++P K+ V WN M+ G + N +A F M
Sbjct: 91 EDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEM 150
Query: 139 PER----NTATYNAMISGFLKHGRLEEATRLFE-----QMPRRNVISYTAMLDGFMKKGE 189
N+ T+ ++S L+ T+L + + ++ T +L + K
Sbjct: 151 RHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANT-LLAMYSKCQC 209
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDK------- 236
+ AR L D + ++VSW +I+GYV+N EA LF M PD
Sbjct: 210 LQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPC 269
Query: 237 ------------------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+VF+ +A+I + K +E A+ + D V
Sbjct: 270 VNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVC 329
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
MI+GY NG +EAL F +++ M+P T S+F A + L LN G++ H +I+
Sbjct: 330 TTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIK 389
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+ V +A++ MY++CG + + F +I + + WN++I + +Q+G +A+
Sbjct: 390 TKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINL 449
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDIL 451
F QMG+ G D ++ LSAC + ++ ++ LM+K G + S + + L+D+
Sbjct: 450 FRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIK--GPLRSDLYAESSLIDMY 507
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ G L + ++ M E + W S+++A
Sbjct: 508 AKCGNLNFSRRVFDRMQ-EKNEVSWNSIISA 537
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 195/442 (44%), Gaps = 49/442 (11%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTA 144
Y + G L+++KNLF ++ + +WN MI G + + A ++ M P++ T
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 145 TYNAMISGFLKH---GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
Y LK G++ T + + +V ++++ + + G + A+ L D +
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGL-KEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------------- 233
K+ V W VM+ GYVKN A ++F M P+
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+ + V ++ + K L+ AR LF+ + D VS+N +I+GY QNG+
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EA LF GMI ++PD T S + L L ++ H +IR+ +V + +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+I +Y +C + ++ Q S + V T+I+ + +G ++AL F + P
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+TF S+ A +N +L ++K + + ++D+ ++ G+L+ A ++
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLACRVF 419
Query: 465 QGMPFEADTGVWGSLLAACVIN 486
+ E D W S++ +C N
Sbjct: 420 NRIT-EKDAICWNSMITSCSQN 440
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY R G + D++ F + +WN +I F G + AL+F+ +M G PD T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 408 FLSLLSACG-----HAGK-VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
F ++ AC GK V+E+++L L V+ + SS L+ + + G L A
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVF--VGSS-----LIKLYAENGHLSDAQ 113
Query: 462 QITQGMPFEADTGVWGSLLAACVIN 486
+ +P + D+ +W +L V N
Sbjct: 114 YLFDNIP-QKDSVLWNVMLNGYVKN 137
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 303/552 (54%), Gaps = 15/552 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V A ++ R G + +A+Q F + +DV+ +NA+I Q+G E+ + M
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT----YNAMISGFLKHGRLEE 161
N ++ ++ C + ++ + E ++ NA+IS + + G L +
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A LF MP+R++IS+ A++ G+ ++ + +A L M + V V++ +++
Sbjct: 384 ARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN 443
Query: 218 NERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ + + + + + N + A++ + + G L A+ +FE Q +D +S+N+M
Sbjct: 444 SSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSM 503
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAG+AQ+G E A +LF M +++PD+ T SV + C + L G+Q H + +G
Sbjct: 504 IAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGL 563
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ +V++ NA+I MY RCG + D+ F + +++SW +I A G KA+ F Q
Sbjct: 564 QLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQ 623
Query: 396 MGLNGF-DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
M GF PDG TF S+LSAC HAG V E +F M YG++P+ EHY CLV +L RA
Sbjct: 624 MQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRA 683
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
+ ++A + MPF D VW +LL AC I+ N+ L E AA +L+ +N AVY++LS
Sbjct: 684 RRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLS 743
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+YAAAG W DV ++R +M+ +G+ K+ SWIE+ N +H F+ D SHP +I+ ELK
Sbjct: 744 NVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELK 803
Query: 575 RASVQMKSVDDF 586
R SV+M+ F
Sbjct: 804 RLSVEMEEAGYF 815
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 240/481 (49%), Gaps = 18/481 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F++N I+ + + A Q+F +M +DVI+WN++I+ Y Q GF +++ LF+ M
Sbjct: 62 IFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQN 121
Query: 109 ---VKNIVSWNCMIAGCIDNDRIDDA----FDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ N +++ ++ C +++ +A +R+ N+++S + K G L
Sbjct: 122 AGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPR 181
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A ++F + R+V+SY ML + +K V + L MS + + V++ ++ +
Sbjct: 182 ARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTT 241
Query: 218 NERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E + + + + ++ V TA++T + G +++A+ F+ I +D V +NA+
Sbjct: 242 PSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNAL 301
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IA AQ+G EA + M + + T +S+ ACS + L G+ H + +G
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++V + NA+I+MY+RCG + + F + +L+SWN IIA +A+ +A+ + Q
Sbjct: 362 SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQ 421
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G P +TFL LLSAC ++ + + E +++ GI + L+++ R G
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCG 480
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR--ELDPQNSAVYVML 513
L +A + +G D W S++A + + E ++M+ EL+P N +L
Sbjct: 481 SLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539
Query: 514 S 514
S
Sbjct: 540 S 540
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 147/279 (52%), Gaps = 4/279 (1%)
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFER 263
++ ++ + EA+ + +M + ++F+ +I + K + +A +F+
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ +D +S+N++I+ YAQ G ++A +LF M P+ T +S+ TAC + L G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
++ H +I+ G++ + V N++++MY +CG + + F I ++VS+NT++ +AQ
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
+ ++ L F QM G PD +T+++LL A ++E + +L V+ G+
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE-EGLNSDIRV 266
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
T LV + R G ++ A Q +G+ + D V+ +L+AA
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIAA 304
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 116/240 (48%), Gaps = 5/240 (2%)
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+ D AT V++ C+ +LL E ++ H ++ G ++ + N +I MY +C +LD+
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F+++ +++SWN++I+ +AQ G +KA F +M GF P+ IT++S+L+AC +
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + ++K G L+ + + G L +A Q+ G+ D + ++L
Sbjct: 144 LENGKKIHSQIIKA-GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS-PRDVVSYNTML 201
Query: 481 AACVINLNVE--LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
V+ LG + P + Y+ L + + M + R+ L E+G+
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISP-DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260
>gi|255575746|ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531775|gb|EEF33594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 304/552 (55%), Gaps = 47/552 (8%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA I L R G + AAR +FD+ K+ +WN +I GY +NG ++E++ LF M +N++
Sbjct: 107 NAMIVGLIRNGDLEAARMVFDESPVKNAASWNGMIAGYAENGRMEEARALFDEMEDRNVI 166
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+W M++G +++ + F+ MP+RN ++ AMI GF +G E+A LF +M R
Sbjct: 167 TWTSMVSGYCRAGEVEEGYHLFRTMPKRNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGA 226
Query: 174 VIS----------YTAMLDGFMKKGEVDKARALSD------------------------- 198
I+ Y GF + G+ AR +++
Sbjct: 227 DITPNIETFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYDGRLSKGLICMYSSIGFM 286
Query: 199 ----YMSFKN-----VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
Y+ KN V S MI GY++ +A+ LF MP DK + T+MI G+
Sbjct: 287 DYAHYIFNKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKITW--TSMIDGYL 344
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
+G + A LF + KD V++ MI+G+ +N + EA LFS M+ ++P +T
Sbjct: 345 VIGNVSEACSLFLYMPEKDAVAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAI 404
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+F A A+ L++GRQ H ++ + + ++ + N++I+MY++CG I ++ F Q+ S +
Sbjct: 405 LFGAAGAVASLDQGRQLHAMLTKTLSDNDLILENSLISMYAKCGEIRNAYRIFSQMISHD 464
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
L+SWN++I F+ HG +AL F M +G P+ +TFL +LSAC HAG +N+ ++F
Sbjct: 465 LISWNSMIMGFSHHGLANEALEVFEAMVDSGTHPNSVTFLGVLSACSHAGLINQGWEIFN 524
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LN 488
M V+ + P EHY C+V++L RAG+L++A ++ G+P E + +WG+LL C + N
Sbjct: 525 AMSDVFAVQPGLEHYICMVNLLGRAGKLKEAEELILGLPLERNHAIWGALLGVCSFSEKN 584
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
++ + AA ++ ELDP N+ +V+L N+YAA+G + ++R M +GV K SWI
Sbjct: 585 ADIAKRAATRILELDPLNAPAHVLLCNIYAASGQHIEEHKLRKEMGLKGVKKVPGCSWIV 644
Query: 549 IGNKVHYFLGGD 560
+ +VH FL GD
Sbjct: 645 LNGRVHVFLSGD 656
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 198/356 (55%), Gaps = 11/356 (3%)
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE 140
++ W ++++ Y ++GF+ E++ LF MP +N VS+N +++G + R+ +A F+ MPE
Sbjct: 10 IVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPE 69
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
RN ++ +M+ G G++ EA LFE+MP RNV+S+ AM+ G ++ G+++ AR + D
Sbjct: 70 RNVVSWTSMLCGLADAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRNGDLEAARMVFDES 129
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
KN SW MI GY +N R EAR LF M D+NV T+M++G+C+ G +E L
Sbjct: 130 PVKNAASWNGMIAGYAENGRMEEARALFDEME--DRNVITWTSMVSGYCRAGEVEEGYHL 187
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQL 319
F + ++ VS+ AMI G+ NG E+AL LF M + D+ P+ T +S+ AC+ L
Sbjct: 188 FRTMPKRNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGF 247
Query: 320 LNEGRQSHVLVIRNGFEA---NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV-SWNT 375
G+Q H +I G + + + +I MYS G + + F + + +V S N
Sbjct: 248 HRLGKQLHARLITEGLDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNY 307
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+I + + G +KA F M + D IT+ S++ G V+E+ LF M
Sbjct: 308 MINGYIRIGLLDKAQNLFDTMPVR----DKITWTSMIDGYLVIGNVSEACSLFLYM 359
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 166/392 (42%), Gaps = 114/392 (29%)
Query: 169 MPRRNVIS----YTAMLDGFMKKGEVDKARALSDY------------------------- 199
MP+R+ +S +T++L + + G VD+ARAL D
Sbjct: 1 MPKRSPLSRIVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEA 60
Query: 200 ------MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
M +NVVSWT M+ G + CEA+ LF MP D+NV AMI G + G
Sbjct: 61 MKLFEEMPERNVVSWTSMLCGLADAGKICEAKSLFEEMP--DRNVVSWNAMIVGLIRNGD 118
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
LE AR++F+ K+ S+N MIAGYA+NG EEA LF M
Sbjct: 119 LEAARMVFDESPVKNAASWNGMIAGYAENGRMEEARALFDEM------------------ 160
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
E R NV ++++ Y R G + + FR + N+VSW
Sbjct: 161 --------EDR-------------NVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIVSW 199
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFD--PDGITFLSLLSACG-----------HAGK 420
+I F +G YE AL+ F +M G D P+ TF+SL AC HA
Sbjct: 200 TAMIGGFTWNGFYEDALLLFLEMK-RGADITPNIETFISLAYACAGLGFHRLGKQLHARL 258
Query: 421 VNESMD-------LFELMVKVYGII-----------PSSEHY---TC--LVDILSRAGQL 457
+ E +D L + ++ +Y I +S +Y +C +++ R G L
Sbjct: 259 ITEGLDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYIRIGLL 318
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
+KA + MP D W S++ ++ NV
Sbjct: 319 DKAQNLFDTMPVR-DKITWTSMIDGYLVIGNV 349
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 10/151 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L + S + + N+ IS ++ G+I A ++F QM + D+I+WN++I G+ +G E+
Sbjct: 425 LTKTLSDNDLILENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSHHGLANEA 484
Query: 101 KNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
+F++M N V++ +++ C I+ ++ F AM + Y M++
Sbjct: 485 LEVFEAMVDSGTHPNSVTFLGVLSACSHAGLINQGWEIFNAMSDVFAVQPGLEHYICMVN 544
Query: 152 GFLKHGRLEEATRLFEQMP-RRNVISYTAML 181
+ G+L+EA L +P RN + A+L
Sbjct: 545 LLGRAGKLKEAEELILGLPLERNHAIWGALL 575
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 307/556 (55%), Gaps = 14/556 (2%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR+ F++ + S+ G A ++F ++ DV++W+AIIT Q G +E+
Sbjct: 357 IRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAA 416
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGF 153
+F+ M ++ +A + Y +++ E + NA+++ +
Sbjct: 417 EVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMY 476
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWT 209
+K G +++ R+FE R++IS+ A+L GF D + + M + N+ ++
Sbjct: 477 MKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFI 536
Query: 210 VMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
++ +++ ++ D N FV TA++ + K LE+A +F R+ +
Sbjct: 537 SILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKR 596
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D ++ ++AGYAQ+G E+A++ F M + ++P++ TL S + CS + L+ GRQ H
Sbjct: 597 DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLH 656
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ I+ G ++ V +A++ MY++CG + D+E+ F + S + VSWNTII ++QHG
Sbjct: 657 SMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGG 716
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
KAL F M G PD +TF+ +LSAC H G + E F + K+YGI P+ EHY C+
Sbjct: 717 KALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACM 776
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
VDIL RAG+ + + M ++ +W ++L AC ++ N+E GE AA K+ EL+P+
Sbjct: 777 VDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEID 836
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
+ Y++LSN++AA GMW DVT VR LM +GV K+ SW+E+ +VH FL D SHP I
Sbjct: 837 SNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIR 896
Query: 568 KIHLELKRASVQMKSV 583
+IHL+L+ ++ SV
Sbjct: 897 EIHLKLQDLHQKLMSV 912
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 218/452 (48%), Gaps = 26/452 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A + ++ G++ A ++F M ++ ++WNA++ G+ Q G ++ NLF M
Sbjct: 264 LFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTG 323
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL-----KHGRLE 160
I + + ++ GC ++ + A ++ R + IS L K G
Sbjct: 324 SEINFSKFTLSTVLKGCANSGNLR-AGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAG 382
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+A ++F ++ +V+S++A++ +KG+ +A + M V+ + V
Sbjct: 383 DALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAAT 442
Query: 221 FCEARELFYRMP----------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ +L+Y +YD V A++T + K+G +++ +FE +D +
Sbjct: 443 --DLGDLYYGESIHACVCKYGFEYDNTV--CNALVTMYMKIGSVQDGCRVFEATTNRDLI 498
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+NA+++G+ N + LR+F+ M+ P+ T +S+ +CS+L ++ G+Q H +
Sbjct: 499 SWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQI 558
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++N + N V A++ MY++ + D+E F ++ +L +W I+A +AQ G EKA+
Sbjct: 559 VKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAV 618
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F QM G P+ T S LS C ++ L + +K G + LVD+
Sbjct: 619 KCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKA-GQSGDMFVASALVDM 677
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ G +E A + G+ DT W +++
Sbjct: 678 YAKCGCVEDAEVVFDGL-VSRDTVSWNTIICG 708
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 209/433 (48%), Gaps = 33/433 (7%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N+ ++ ++ G + A ++F ++ +DV++W A+ITG+ G+ + NLF M + +
Sbjct: 167 NSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVE 226
Query: 114 SWNCMIAG-------CIDND----------RIDDAFDYFQAMPERNTATYNAMISGFLKH 156
+ A C+D + ++ D D F +A++ + K
Sbjct: 227 ANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVG---------SALVDLYAKC 277
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
G + A R+F MP++N +S+ A+L+GF + G+ +K L M+ + ++ +
Sbjct: 278 GEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVL 337
Query: 217 K---NERFCEARELFYRMP---DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
K N A ++ + + + + F+ ++ + K G+ +A +F RI+ D V
Sbjct: 338 KGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVV 397
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S++A+I Q G + EA +F M + P+ TL S+ +A + L L G H V
Sbjct: 398 SWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACV 457
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+ GFE + +VCNA++TMY + G + D F + +L+SWN +++ F + + L
Sbjct: 458 CKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGL 517
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F+QM GF+P+ TF+S+L +C V+ + +VK + + T LVD+
Sbjct: 518 RIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVK-NSLDGNDFVGTALVDM 576
Query: 451 LSRAGQLEKAWQI 463
++ LE A I
Sbjct: 577 YAKNRFLEDAETI 589
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 166/348 (47%), Gaps = 18/348 (5%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV 205
+N++++ + K G A ++F ++P R+V+S+TA++ GF+ +G A L M + V
Sbjct: 166 WNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGV 225
Query: 206 VSWTVMITGYVKNERFCEAREL-------FYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
+ +K C E ++ D+ ++FV +A++ + K G + A
Sbjct: 226 EANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDF-SDLFVGSALVDLYAKCGEMVLAE 284
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F + ++ VS+NA++ G+AQ G AE+ L LF M ++ TL +V C+
Sbjct: 285 RVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSG 344
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L G+ H L IR G E + + ++ MYS+CG D+ F +I P++VSW+ II
Sbjct: 345 NLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIIT 404
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
Q G +A F +M +G P+ T SL+SA G + + + K YG
Sbjct: 405 CLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCK-YGFE 463
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG----VWGSLLAA 482
+ LV + + G ++ ++ FEA T W +LL+
Sbjct: 464 YDNTVCNALVTMYMKIGSVQDGCRV-----FEATTNRDLISWNALLSG 506
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 17/192 (8%)
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
LR +SGM++ C++ LNEG+ H VI++G + + N+++ +
Sbjct: 128 LRQYSGMLR---------------TCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNV 172
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y++CG + F +I ++VSW +I F G+ A+ F +M G + + T+
Sbjct: 173 YAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTY 232
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+ L AC + + +KV G + LVD+ ++ G++ A ++ MP
Sbjct: 233 ATALKACSMCLDLEFGKQVHAEAIKV-GDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP 291
Query: 469 FEADTGVWGSLL 480
+ + W +LL
Sbjct: 292 -KQNAVSWNALL 302
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/474 (37%), Positives = 273/474 (57%), Gaps = 13/474 (2%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
M A C RI +A F M R+ T++ MI G+ + G +A LFE+M NV
Sbjct: 166 MYAAC---GRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPD 222
Query: 178 TAMLDGFM----KKGEVDKARALSDYMSFKNVVS----WTVMITGYVKNERFCEARELFY 229
ML + + G + + + D++ N+V + ++T Y A LF
Sbjct: 223 EMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFE 282
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+M KN+ TAM+TG+ K+G +ENAR +F ++ KD V ++AMI+GYA++ +EAL
Sbjct: 283 KMTP--KNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEAL 340
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF+ M + ++PD T++SV TAC+ L L++ + H+ V +NGF + + NA+I MY
Sbjct: 341 NLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMY 400
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++CG + + F ++ N++SW +I+AFA HG AL FF QM +P+GITF+
Sbjct: 401 AKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFV 460
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
+L AC HAG V E +F M+ + I P HY C+VD+ RA L +A ++ + MP
Sbjct: 461 GVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPL 520
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ +WGSL+AAC ++ +ELGE AAK++ ELDP + +V LSN+YA A W DV +V
Sbjct: 521 APNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQV 580
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
R LMK +G++K+ S E+ N++H FL D SH D+I+ +L ++K V
Sbjct: 581 RKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLV 634
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 212/447 (47%), Gaps = 68/447 (15%)
Query: 14 RILFPPILRILSTPDS-CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQL 72
R FPP+L+ LS S H + S FV + + G+I+ AR +
Sbjct: 122 RFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDP--FVQTGLVRMYAACGRIAEARLM 179
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI---------VSWNCMIAGCI 123
FD+M +DV+TW+ +I GY Q+G ++ LF+ M N+ V C AG +
Sbjct: 180 FDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNL 239
Query: 124 DNDRIDDAFDYFQAMPERNTAT----YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
++ F + E N +A+++ + G ++ A LFE+M +N+++ TA
Sbjct: 240 SYGKMIHDF-----IMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTA 294
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD 233
M+ G+ K G+++ AR++ + M K++V W+ MI+GY +++ EA LF M PD
Sbjct: 295 MVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPD 354
Query: 234 --------------------------YDKNVF-----VVTAMITGFCKVGMLENARLLFE 262
DKN F + A+I + K G LE AR +F+
Sbjct: 355 QVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFD 414
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
++ K+ +S+ MI+ +A +G A ALR F M +++P+ T V V ACS L+ E
Sbjct: 415 KMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEE 474
Query: 323 GRQSHVLVIRNGFEANVSVCNA----VITMYSRCGGILDS-ELAFRQIHSPNLVSWNTII 377
GR+ +I E N++ + ++ ++ R + ++ EL +PN++ W +++
Sbjct: 475 GRKIFYSMIN---EHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLM 531
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPD 404
AA HG E L F+ L DPD
Sbjct: 532 AACRVHGEIE--LGEFAAKRLLELDPD 556
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 183/399 (45%), Gaps = 64/399 (16%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
+I+ C + +D A F +P+ T N L E +R + P + ++ Y
Sbjct: 62 VISSCALSSSLDYALSVFNLIPKPETHLCNRF---------LRELSR--SEEPEKTLLVY 110
Query: 178 TAMLDGFMKKGEVDKARALS-DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
M + + L+ D SF ++ + V+ E L ++ +D
Sbjct: 111 ERM-----------RTQGLAVDRFSFPPLLKALSRVKSLVEG---LEIHGLAAKL-GFDS 155
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+ FV T ++ + G + ARL+F+++ +D V+++ MI GY Q+G+ +AL LF M
Sbjct: 156 DPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMK 215
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG-- 354
+++PD+ L +V +AC L+ G+ H ++ N + + +A++TMY+ CG
Sbjct: 216 NYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMD 275
Query: 355 -----------------------------ILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
I ++ F Q+ +LV W+ +I+ +A+
Sbjct: 276 LALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDS 335
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES--MDLFELMVKVYGIIPSSEH 443
++AL F++M G PD +T LS+++AC H G ++++ + LF G +P +
Sbjct: 336 PQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPIN-- 393
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+++ ++ G LE+A +I MP + W +++A
Sbjct: 394 -NALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISA 430
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 114/234 (48%), Gaps = 2/234 (0%)
Query: 235 DKNVFVVTAMITGFCKVGM-LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D++ ++ ++ C + L+ A +F I + N + +++ E+ L ++
Sbjct: 52 DRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYE 111
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + D + + A S ++ L EG + H L + GF+++ V ++ MY+ CG
Sbjct: 112 RMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACG 171
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ L F ++ ++V+W+ +I + Q G + AL+ F +M +PD + ++LS
Sbjct: 172 RIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLS 231
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
ACG AG ++ + + +++ I+ + LV + + G ++ A + + M
Sbjct: 232 ACGRAGNLSYGKMIHDFIME-NNIVVDPHLQSALVTMYASCGSMDLALNLFEKM 284
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 3/173 (1%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA-FRQIHS 367
++F+A S+ L +Q H ++R+ + + S+ ++ LD L+ F I
Sbjct: 25 TLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPK 84
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
P N + ++ EK L+ + +M G D +F LL A + E +++
Sbjct: 85 PETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEI 144
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
L K+ G T LV + + G++ +A + M F D W ++
Sbjct: 145 HGLAAKL-GFDSDPFVQTGLVRMYAACGRIAEARLMFDKM-FHRDVVTWSIMI 195
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 193/564 (34%), Positives = 304/564 (53%), Gaps = 51/564 (9%)
Query: 57 ISALSRAGKISAARQLFDQM----TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
++A S G + +QL + + D I +++ Y ++G ++E+ +F S N+
Sbjct: 251 LAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNV 310
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V WN M+ D + +FD F M N TY M+ G + ++
Sbjct: 311 VLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSL 370
Query: 169 MPRRNVIS--YTA--MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC-E 223
+ S Y + ++D + K G +DKA+ + D + K+VVSWT MI GYV++E FC E
Sbjct: 371 TIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHE-FCKE 429
Query: 224 ARELFYRM------PD-------------------------------YDKNVFVVTAMIT 246
A E F M PD Y +V + ++
Sbjct: 430 ALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVY 489
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ + G+ + A FE I+ K+ +++N +I+G+AQ+G+ EEAL++F M + + + T
Sbjct: 490 LYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFT 549
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
VS +A + L + +G+Q H VI+ G+ + + NA+I++Y +CG I D+++ F ++
Sbjct: 550 FVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMT 609
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
N VSWNTII +QHG +AL F QM G P +TF+ +L+AC H G V E +
Sbjct: 610 KRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLC 669
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
F+ M +GI P +HY C+VDIL RAGQL++A + + MP AD+ VW +LL+AC ++
Sbjct: 670 YFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVH 729
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
N+E+GE AAK + EL+P +SA YV+LSN YA G W ++R +MK++GV K+ SW
Sbjct: 730 KNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSW 789
Query: 547 IEIGNKVHYFLGGDMSHPCIDKIH 570
IE+ N VH F GD HP D+I+
Sbjct: 790 IEVKNVVHAFFVGDRLHPLADQIY 813
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 160/326 (49%), Gaps = 25/326 (7%)
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
M R A++N ++GFL E+ LF R+ +M G VD A AL
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQ-----------YMVLGAVDFACALR 49
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENA 257
W ++ A+ + + Y + +I + K G + A
Sbjct: 50 ACRGSGR--RWPLVPE--------IHAKAIICGLSGYR---IIGNLLIDLYAKKGFVRRA 96
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
R +FE + +D VS+ A+++GYAQNG+ EEA+RL+ M + + P L S+ +AC+
Sbjct: 97 RRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKT 156
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
+L GR HV V + GF + V NA+I++Y RC ++ F + + V++NT+I
Sbjct: 157 ELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLI 216
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
+ AQ GH ++AL F +M L+G PD +T SLL+AC G + + L ++K G+
Sbjct: 217 SGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKA-GM 275
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQI 463
L+D+ ++G +E+A QI
Sbjct: 276 SLDYIMEGSLLDLYVKSGDIEEALQI 301
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 224/494 (45%), Gaps = 25/494 (5%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
+ Y + N I ++ G + AR++F++++ +D ++W A+++GY QNG +E+ L++
Sbjct: 74 SGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYRE 133
Query: 107 MPVKNIVS----WNCMIAGCIDND-----RIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
M +V + +++ C + R+ Y Q T NA+IS +L+
Sbjct: 134 MHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFS-ETFVGNALISLYLRCR 192
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY-- 215
A R+F M + +++ ++ G + G D+A + D M + +V I
Sbjct: 193 SFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLA 252
Query: 216 ----VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
V + R + + + + +++ + K G +E A +F+ + V
Sbjct: 253 ACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVL 312
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N M+ Y Q ++ +F M+ ++P+ T + C+ + G Q H L I
Sbjct: 313 WNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTI 372
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+NGF++++ V +I MYS+ G + ++ I ++VSW ++IA + QH ++AL
Sbjct: 373 KNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALE 432
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F +M G PD I S +SAC V++ + V V G + LV +
Sbjct: 433 TFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQI-HARVYVSGYSADVSIWNGLVYLY 491
Query: 452 SRAGQLEKAWQITQGMPFEADTGV-WGSLLAACVINLNVELGELAAKKMRELDPQNSA-- 508
+R G ++A+ + + E G+ W L++ L E A K ++D +
Sbjct: 492 ARCGISKEAFSSFEAI--EHKEGITWNGLISGFA---QSGLYEEALKVFMKMDQAGAKYN 546
Query: 509 VYVMLSNLYAAAGM 522
V+ +S++ A+A +
Sbjct: 547 VFTFVSSISASANL 560
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+ T ++NA IS + G I A+ F +MT ++ ++WN IIT Q+G E+
Sbjct: 573 VIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEA 632
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERN-----TATYNAMIS 151
+LF M + + V++ ++ C +++ YF++M + Y ++
Sbjct: 633 LDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVD 692
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ G+L+ A R E+MP
Sbjct: 693 ILGRAGQLDRAKRFVEEMP 711
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 193/618 (31%), Positives = 310/618 (50%), Gaps = 89/618 (14%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT-TKDVITWNAII 88
C TP N L+ + S + L + G + + L + +DV+ AI+
Sbjct: 216 CEGMTPEQPN-LVSVLSA---------VRHLGKPGILESIHVLVHKTGFERDVVVGTAIL 265
Query: 89 TGYWQN-GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN 147
GY ++ L + F+ M +N +W+ +IA RIDDAF +Q P ++ +
Sbjct: 266 NGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRT 325
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
+M++G ++GR+++A LF+Q+ NV+S+ AM+ G+M+ VD+A L + M F+N +S
Sbjct: 326 SMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTIS 385
Query: 208 WTVMITGYVKNERFCEA-------------------RELFYRMPDYDK------------ 236
W MI GY +N R +A F+ + +
Sbjct: 386 WAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAV 445
Query: 237 ------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
N +V A+IT + K + + R +F+R+ KD VS+N+ ++ QN + +EA
Sbjct: 446 KAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARD 505
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNE---------------------------- 322
+F+ M PD + ++ +AC+ NE
Sbjct: 506 VFNNMPS----PDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSG 561
Query: 323 -------GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
G+Q H + I+ G ++ + V NA+++MY +C DS F + ++ +WNT
Sbjct: 562 NLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSA-DSLKVFDSMEERDIFTWNT 620
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
II +AQHG +A+ + M G P+ +TF+ LL AC H+G V+E F+ M Y
Sbjct: 621 IITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDY 680
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
G+ P EHY C+VD+L RAG ++ A MP E D+ +W +LL AC I+ NVE+G A
Sbjct: 681 GLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRA 740
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
A+K+ ++P N+ YVMLSN+Y++ GMW +V +VR LMKE+GV K SW++I NK+H
Sbjct: 741 AEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHS 800
Query: 556 FLGGDMSHPCIDKIHLEL 573
F+ GD H I I+ L
Sbjct: 801 FVTGDEEHEQIQNIYATL 818
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/582 (26%), Positives = 282/582 (48%), Gaps = 83/582 (14%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT 89
C N P + L S + +S +RAG++ AR++FD M ++ + WNA++T
Sbjct: 75 CNNGMPDAGRSLADAISGGNLRTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVT 134
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
Y QNG + ++ LF +MP +++ SWN M+ G + +++A + F+ MPERN ++ M
Sbjct: 135 CYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVM 194
Query: 150 ISGFL---KHGRLEEATR--LFEQMP---------------------------------- 170
ISG++ +HGR + R L E M
Sbjct: 195 ISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGF 254
Query: 171 RRNVISYTAMLDGFMKK--------------------------------GEVDKARALSD 198
R+V+ TA+L+G+ K G +D A A+
Sbjct: 255 ERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQ 314
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
K+V S T M+TG + R +A+ LF ++ ++ NV AMITG+ + M++ A
Sbjct: 315 RDPLKSVPSRTSMLTGLARYGRIDDAKILFDQI--HEPNVVSWNAMITGYMQNEMVDEAE 372
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
LF R+ ++ +S+ MIAGYA+NG +E+AL + + M P ++L S F ACS ++
Sbjct: 373 DLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIE 432
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L G+Q H L ++ G + N VCNA+IT+Y + I F ++ + VS+N+ ++
Sbjct: 433 ALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMS 492
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
A Q+ +++A F+ M PD +++ +++SAC A + NE++++F M+ +
Sbjct: 493 ALVQNNLFDEARDVFNNMP----SPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE-L 547
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQI-TQGMPFEADTGVWGSLLAACVINLNVELGELAAK 497
P+ T L+ + G + QI T + D+G+ ++A ++++ + +
Sbjct: 548 PNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGL---VVANALVSMYFKCSSADSL 604
Query: 498 KMRE-LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
K+ + ++ ++ + + YA G+ R+ R+ LM GV
Sbjct: 605 KVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGV 646
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 200/380 (52%), Gaps = 21/380 (5%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
+A+I L R G++ AR++FD M +D+I WN++I Y NG ++L ++ N+
Sbjct: 37 SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLR 96
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+ +++G R+ DA F M RNT +NAM++ ++++G + A +LF+ MP R+
Sbjct: 97 TGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRD 156
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-- 231
V S+ ML G+ +++AR L + M +N VSWTVMI+GYV E+ A ++F M
Sbjct: 157 VSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLC 216
Query: 232 ----PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQN-GVA 285
P+ N+ V + + K G+LE+ +L + +D V A++ GY ++ +
Sbjct: 217 EGMTPE-QPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNML 275
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+ A++ F GM ++ T ++ A S +++ V + +V ++
Sbjct: 276 DSAVKFFEGMAAR----NEYTWSTIIAALSQAGRIDDA----FAVYQRDPLKSVPSRTSM 327
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+T +R G I D+++ F QIH PN+VSWN +I + Q+ ++A F++M +
Sbjct: 328 LTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR----NT 383
Query: 406 ITFLSLLSACGHAGKVNESM 425
I++ +++ G+ +++
Sbjct: 384 ISWAGMIAGYARNGRSEQAL 403
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 178/376 (47%), Gaps = 44/376 (11%)
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM---------------------- 180
T+ +A I + GRL EA +F+ MP R++I++ +M
Sbjct: 33 TSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISG 92
Query: 181 ---------LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
L G+ + G V AR + D M +N V+W M+T YV+N AR+LF M
Sbjct: 93 GNLRTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAM 152
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P D + + M+TG+C ++E AR LFER+ ++ VS+ MI+GY A +
Sbjct: 153 PSRDVSSW--NTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDM 210
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
F M+ M P+ LVSV +A L HVLV + GFE +V V A++ Y++
Sbjct: 211 FRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTK 270
Query: 352 CGGILDSELAFRQ-IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+LDS + F + + + N +W+TIIAA +Q G + A + + L + S
Sbjct: 271 DVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP----SRTS 326
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+L+ G+++++ LF+ + + P+ + ++ + +++A + MPF
Sbjct: 327 MLTGLARYGRIDDAKILFDQIHE-----PNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR 381
Query: 471 ADTGVWGSLLAACVIN 486
+T W ++A N
Sbjct: 382 -NTISWAGMIAGYARN 396
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/601 (32%), Positives = 314/601 (52%), Gaps = 69/601 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTK---DVITWNAIITGYWQNGFLQESKNLFQS 106
VFV N +S R G ARQ+FD+M + D+++WN+I+ Y Q G + +F+
Sbjct: 161 VFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFER 220
Query: 107 M-----------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK 155
M + N++ C G + + + E + NA++ + K
Sbjct: 221 MTEDLGIRPDAVSLVNVLP-ACASVGAWSRGKQVHGYALRSGLFE-DVFVGNAVVDMYAK 278
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVM 211
G +EEA ++FE+M ++V+S+ AM+ G+ + G D A L + + + NVV+W+ +
Sbjct: 279 CGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAV 338
Query: 212 ITGYVKNERFCEARELFYRMP--------------------------------------- 232
I GY + EA ++F +M
Sbjct: 339 IAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWIL 398
Query: 233 -----DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD--CVSFNAMIAGYAQNGVA 285
D ++ V+ A+I + K + AR +F+ I PKD V++ +I G AQ+G A
Sbjct: 399 NLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEA 458
Query: 286 EEALRLFSGMIKMD--MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE-ANVSVC 342
EAL LFS M++ D + P+ T+ AC+ L L GRQ H V+RN FE A + V
Sbjct: 459 NEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVA 518
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
N +I MYS+ G + + + F +H N VSW +++ + HG E+AL F +M G
Sbjct: 519 NCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLV 578
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
PDG+TF+ +L AC H+G V++ ++ F M K +G++P +EHY C+VD+LSRAG+L++A +
Sbjct: 579 PDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAME 638
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ +GMP + VW +LL+AC + NVELGE AA ++ EL+ N Y +LSN+YA A
Sbjct: 639 LIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARC 698
Query: 523 WRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
W+DV R+R LMK G+ K+ SW++ F GD SHP +I+ L+ ++K+
Sbjct: 699 WKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKA 758
Query: 583 V 583
+
Sbjct: 759 L 759
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 213/494 (43%), Gaps = 83/494 (16%)
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVS 114
S A +S R+L ++ V WN +I GFL++ L++ M P
Sbjct: 73 SPAKALSVLRRL--HPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFP 130
Query: 115 WNCMIAGCIDNDRIDDAFD--YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
+ G I + R + F + E N N ++S + + G E A ++F++M R
Sbjct: 131 FVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRER 190
Query: 173 NV---ISYTAMLDGFMKKGEVDKARALSDYMS---------------------------- 201
V +S+ +++ +M+ G+ +A + + M+
Sbjct: 191 GVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRG 250
Query: 202 ------------FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
F++V ++ Y K EA ++F RM K+V AM+TG+
Sbjct: 251 KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK--VKDVVSWNAMVTGYS 308
Query: 250 KVGMLENARLLFERIQPK----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
++G ++A LFE+I+ + + V+++A+IAGYAQ G+ EAL +F M +P+
Sbjct: 309 QIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVV 368
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIR-------NGFEANVSVCNAVITMYSRCGGILDS 358
TLVS+ + C+ L G+++H I+ N ++ V NA+I MYS+C +
Sbjct: 369 TLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 428
Query: 359 ELAFRQIHSPN--LVSWNTIIAAFAQHGHYEKALIFFSQM--GLNGFDPDGITFLSLLSA 414
F I + +V+W +I AQHG +AL FSQM N P+ T L A
Sbjct: 429 RAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMA 488
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEH-----YTCLVDILSRAGQLEKAWQITQGMPF 469
C G + F + Y + E CL+D+ S++G ++ A + M
Sbjct: 489 CARLGALR-----FGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM-- 541
Query: 470 EADTGV-WGSLLAA 482
GV W SL+
Sbjct: 542 HQRNGVSWTSLMTG 555
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 8/247 (3%)
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSF--NAMIAGYAQNGVAEEALRLFSGMIKMD 299
T +I+ + A + R+ P F N +I G E+ L+L+ M ++
Sbjct: 62 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 121
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+PD T V AC + G H +V +GFE NV V N +++MY RCG ++
Sbjct: 122 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 181
Query: 360 LAF---RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSAC 415
F R+ +LVSWN+I+AA+ Q G +A+ F +M + G PD ++ +++L AC
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 241
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
G + + ++ G+ +VD+ ++ G +E+A ++ + M + D
Sbjct: 242 ASVGAWSRGKQVHGYALRS-GLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK-DVVS 299
Query: 476 WGSLLAA 482
W +++
Sbjct: 300 WNAMVTG 306
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F + +FV N I S++G + AAR +FD M ++ ++W +++TGY +G +E+ +F
Sbjct: 510 FESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIF 569
Query: 105 QSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLK 155
M V + V++ ++ C + +D +YF M + Y M+ +
Sbjct: 570 YEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSR 629
Query: 156 HGRLEEATRLFEQMPRR 172
GRL+EA L MP +
Sbjct: 630 AGRLDEAMELIRGMPMK 646
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 306/547 (55%), Gaps = 15/547 (2%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV-- 109
V N+ I+A + G + +A LFD+++ DV++WN++I G NGF +F M +
Sbjct: 232 VVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILG 291
Query: 110 --KNIVSWNCMIAGC--IDNDRIDDAFDYF--QAMPERNTATYNAMISGFLKHGRLEEAT 163
++ + ++ C I N + A F +A N ++ + K G L AT
Sbjct: 292 VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 351
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK----NE 219
+F +M ++S+T+++ ++++G A L D M K V +T V +
Sbjct: 352 EVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 411
Query: 220 RFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ R++ + N+ V A+I + K G +E ARL+F +I KD VS+N MI
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GY+QN + EAL LF M K +PDD T+ V AC+ L L++GR+ H ++R G+ +
Sbjct: 472 GYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS 530
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
++ V A++ MY++CG ++ ++L F I +L+SW +IA + HG +A+ F++M
Sbjct: 531 DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMR 590
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
+ G +PD +F ++L+AC H+G +NE F M G+ P EHY C+VD+L+R G L
Sbjct: 591 IAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNL 650
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
KA++ + MP + DT +WG LL+ C I+ +V+L E A+ + EL+P N+ YV+L+N+Y
Sbjct: 651 SKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVY 710
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
A A W +V ++R M+++G + SWIE+G K + F+ G+ HP KI + L + +
Sbjct: 711 AEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLT 770
Query: 578 VQMKSVD 584
+QM++ D
Sbjct: 771 MQMQNED 777
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 208/435 (47%), Gaps = 21/435 (4%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G + R++FD++ V WN +++ Y + G +ES +LF+ M +V NC C+
Sbjct: 143 GDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG-NCYTFTCV 201
Query: 124 --------DNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
Y + NTA N++I+ + K G +E A LF+++ +V
Sbjct: 202 LKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDV 261
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNV-VSWTVMIT-----GYVKNERFCEARELF 228
+S+ +M++G + G + M V V T +++ + N A F
Sbjct: 262 VSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGF 321
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+ + V ++ + K G L A +F ++ VS+ ++IA Y + G+ +A
Sbjct: 322 GVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDA 381
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
+ LF M ++PD T+ S+ AC+ L++GR H VI+NG +N+ V NA+I M
Sbjct: 382 IGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINM 441
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y++CG + ++ L F +I ++VSWNT+I ++Q+ +AL F M F PD IT
Sbjct: 442 YAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITM 500
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC-LVDILSRAGQLEKAWQITQGM 467
+L AC +++ ++ +++ G S H C LVD+ ++ G L A + +
Sbjct: 501 ACVLPACAGLAALDKGREIHGHILR-RGYF-SDLHVACALVDMYAKCGLLVLAQLLFDMI 558
Query: 468 PFEADTGVWGSLLAA 482
P + D W ++A
Sbjct: 559 P-KKDLISWTVMIAG 572
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 179/382 (46%), Gaps = 39/382 (10%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVI----SYTAMLDGFMKKGEVDKARALSDYMS 201
+N ++S + K G E+ LF++M + V+ ++T +L F G+V + + + Y
Sbjct: 163 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGY-- 220
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
V+ G+ N VV ++I + K G +E+A LF
Sbjct: 221 --------VLKLGF-------------------GSNTAVVNSLIAAYFKFGGVESAHNLF 253
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ + D VS+N+MI G NG + L +F M+ + ++ D TLVSV AC+ + L+
Sbjct: 254 DELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLS 313
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
GR H ++ F V N ++ MYS+CG + + F ++ +VSW +IIAA+
Sbjct: 314 LGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYV 373
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
+ G Y A+ F +M G PD T S++ AC + +++ D+ ++K G+ +
Sbjct: 374 REGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNL 432
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGELAAKKMR 500
L+++ ++ G +E+A + +P + D W +++ N L E EL +
Sbjct: 433 PVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGGYSQNLLPNEALELFLDMQK 491
Query: 501 ELDPQNSAVYVMLSNLYAAAGM 522
+ P + M L A AG+
Sbjct: 492 QFKPDD---ITMACVLPACAGL 510
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%), Gaps = 6/239 (2%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ G L R +F++I +N +++ YA+ G E++ LF M K+ + + T
Sbjct: 139 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 198
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
V +AL + E ++ H V++ GF +N +V N++I Y + GG+ + F ++
Sbjct: 199 TCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE 258
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
P++VSWN++I +G L F QM + G + D T +S+L AC + G ++ L
Sbjct: 259 PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRAL 318
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV--WGSLLAACV 484
VK L+D+ S+ G L A ++ M DT + W S++AA V
Sbjct: 319 HGFGVKAC-FSEEVVFSNTLLDMYSKCGNLNGATEVFVKM---GDTTIVSWTSIIAAYV 373
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 100/214 (46%), Gaps = 4/214 (1%)
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NA I + + G A+ L + ++ + + SV C+ + L +G++ H ++I
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
NG + ++ ++ MY CG ++ F +I + + WN +++ +A+ G++ +++
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M G + TF +L GKV E + ++K+ G ++ L+
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKL-GFGSNTAVVNSLIAAYF 241
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ G +E A + + E D W S++ CV+N
Sbjct: 242 KFGGVESAHNLFDELS-EPDVVSWNSMINGCVVN 274
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/609 (30%), Positives = 322/609 (52%), Gaps = 78/609 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++ N ++A + +G + AR++FD M ++++T N++++ + G +++ + LF S+P
Sbjct: 46 TYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQ 105
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM--------PERNTATYNAMISGFL------- 154
++ VS+N ++AG A + A+ P R T + M++ L
Sbjct: 106 RDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGR 165
Query: 155 --------------------------KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
K G + +A R+F++M +NV+ M+ G ++
Sbjct: 166 QVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCK 225
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--------------- 233
V +ARAL + + ++ ++WT M+TG +N EA ++F RM
Sbjct: 226 MVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILT 285
Query: 234 ----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
Y+ NVFV +A++ + K + A +F R+ K+ +S
Sbjct: 286 ACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIIS 345
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ AMI GY QNG EEA+R+FS M + ++PDD TL SV ++C+ L L EG Q H L +
Sbjct: 346 WTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLAL 405
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+G V+V NA++T+Y +CG I D+ F ++ + VSW ++ +AQ G ++ +
Sbjct: 406 VSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETID 465
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F +M G PDG+TF+ +LSAC +G V++ F M + + I+P +HYTC++D+
Sbjct: 466 LFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLY 525
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
SR+G L++A + + MP D W +LL+AC + ++E+G+ AA+ + +LDPQN A YV
Sbjct: 526 SRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYV 585
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHL 571
+L +++A+ G W DV ++R M+++ V K+ SWI+ NKVH F D SHP I+
Sbjct: 586 LLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYE 645
Query: 572 ELKRASVQM 580
+L+ + +M
Sbjct: 646 KLQWLNSKM 654
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 184/400 (46%), Gaps = 59/400 (14%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++RL Y F + + ++ G I AR++FD+M K+V+ N +ITG + + E+
Sbjct: 171 ILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEA 230
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKH 156
+ LF+++ ++ ++W M+ G N +A D F+ M T+ ++++
Sbjct: 231 RALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGAL 290
Query: 157 GRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
LEE ++ + R NV +A++D + K V A A+ M +KN++SWT MI
Sbjct: 291 AALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMI 350
Query: 213 TGYVKNERFCEARELFYRM------PD-------------------------------YD 235
GY +N EA +F M PD
Sbjct: 351 VGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLR 410
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
V V A++T + K G +E+A LF+ + D VS+ A++ GYAQ G A+E + LF M
Sbjct: 411 PYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKM 470
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGR-------QSHVLVIRNGFEANVSVCNAVITM 348
+ ++PD T + V +ACS L+++GR Q H +V + +I +
Sbjct: 471 LSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHY------TCMIDL 524
Query: 349 YSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYE 387
YSR G + +E +Q+ P+ W T+++A G E
Sbjct: 525 YSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDME 564
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 107/272 (39%), Gaps = 64/272 (23%)
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
L R + +++ ++T + G+L +AR +F+ + ++ V+ N++++ A+ G+
Sbjct: 35 LILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVR 94
Query: 287 EALRLFSGMIKMD---------------------------------MQPDDATLVSVFTA 313
+ RLF+ + + D ++P T+ V
Sbjct: 95 DMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMV 154
Query: 314 CSALQLLNEGRQSHVLVIRNGFEA-------------------------------NVSVC 342
SAL GRQ H ++R GF A NV +C
Sbjct: 155 ASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMC 214
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
N +IT RC + ++ F I + ++W T++ Q+G +AL F +M G
Sbjct: 215 NTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVG 274
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
D TF S+L+ACG + E + + +
Sbjct: 275 IDQYTFGSILTACGALAALEEGKQIHAYITRT 306
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 300/531 (56%), Gaps = 14/531 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV I+A S +++ A +F+Q+ DV+ +N +I + +N + ++F M
Sbjct: 50 FVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDS 109
Query: 111 NIVSWNC----MIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHG--RL 159
+ + N ++ C + + A E+ + N++I + K G +
Sbjct: 110 GVCADNFTYPFLLKACSGKVWVR-VVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGV 168
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
A ++FE M R+ +S+ +M+ G +K GE+ +AR L D M ++ VSW ++ GYVK
Sbjct: 169 AAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAG 228
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
A ELF +MP +NV + M+ G+ K G ++ AR+LF+++ K+ V + MI+GY
Sbjct: 229 EMNAAFELFEKMPA--RNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGY 286
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
A+ G+A++A+ L++ M + ++ DD T++S+ +AC+ LL G++ H + R F+ +
Sbjct: 287 AEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCST 346
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
V NA+I MY++CG + ++ F + ++VSWN II A HGH EKAL FS+M
Sbjct: 347 PVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGE 406
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
GF PD +TF+ +L AC HAG V+E + F M + YG+ P EHY C+VD+L R G+L++
Sbjct: 407 GFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKE 466
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
A+++ MP E + +WG+LL AC ++ L E ++ + + +S MLSN+YAA
Sbjct: 467 AFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAA 526
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
AG W + +RL MK + K S IE+ ++VH F D SHP D+I+
Sbjct: 527 AGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIY 577
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 183/350 (52%), Gaps = 22/350 (6%)
Query: 50 VFVNNAKISALSRAG--KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
+FV N+ I + + G ++AAR++F+ M +D ++WN++I G + G L E++ LF M
Sbjct: 150 IFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEM 209
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFE 167
P ++ VSWN ++ G + ++ AF+ F+ MP RN +++ M+ G+ K G ++ A LF+
Sbjct: 210 PERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFD 269
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS-----FKNVVSWTVM----ITGYVKN 218
+MP +N++ +T M+ G+ +KG A L + M F + +++ ++G +
Sbjct: 270 KMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGL 329
Query: 219 ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+ A R + + V A+I + K G LENA +F + KD VS+NA+I G
Sbjct: 330 GKRVHASIERTR---FKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQG 386
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEA 337
A +G E+AL+LFS M PD T V V AC+ ++EG H + G
Sbjct: 387 LAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPP 446
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHS----PNLVSWNTIIAAFAQH 383
V ++ + R G + + AFR +HS PN + W T++ A H
Sbjct: 447 EVEHYGCMVDLLGRGGRLKE---AFRLVHSMPLEPNAIIWGTLLGACRMH 493
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
+S CS+L N+ +Q H V++ V +I +S C + + F QI
Sbjct: 21 ISDLHRCSSL---NQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQD 77
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV-NESMD 426
P+++ +NT+I A ++ A F +M +G D T+ LL AC +GKV ++
Sbjct: 78 PDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKAC--SGKVWVRVVE 135
Query: 427 LFELMVKVYG-----IIPSS---EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ V+ G +P+S ++ C +D ++ A K +++ E DT W S
Sbjct: 136 MIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAA---RKVFEVMA----ERDTVSWNS 188
Query: 479 LLAACVINLNVELGEL--AAKKMRELDPQNSAVYVMLSNLYAAAG 521
++ V++GEL A + E+ +++ + + + Y AG
Sbjct: 189 MIGGL-----VKVGELGEARRLFDEMPERDTVSWNTILDGYVKAG 228
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 203/602 (33%), Positives = 323/602 (53%), Gaps = 26/602 (4%)
Query: 1 MLCNSYFHQTYLKRILFPPILRILSTPDSCGN-FTPHSSNCL-----IRLFSTQ--YVFV 52
M +S FH KR+ P I++ L S G F SS L IRL S Y+
Sbjct: 1 MPTSSKFHSNRTKRV--PCIVKSLLHLSSQGQLFQAISSLGLLSRNGIRLPSKTLAYLLQ 58
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
A +L + GK + + N +I Y + G + +F M +N+
Sbjct: 59 QCANTKSL-KLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDEMSTRNL 117
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR- 171
SWN M++G +I A F MPE++ ++N M+ + K G +A R + ++ R
Sbjct: 118 YSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRL 177
Query: 172 ---RNVISYTAMLDGFMKKGEVDKARA------LSDYMSFKNVVSWTVMITGYVKNERFC 222
N S+ +L+ +K E++ ++ ++ ++S N+V + ++ Y K
Sbjct: 178 GIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLS--NLVISSSVLDAYAKCSEMG 235
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+AR LF M ++V T M++G+ + G +E AR LF+ + K+ V++ ++IAGYA++
Sbjct: 236 DARRLFDEM--IIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARH 293
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
+ +AL LF+ M+ ++++PD T S A +++ LN G+Q H +IR N V
Sbjct: 294 DLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVV 353
Query: 343 NAVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
+++I MYS+CG + L F + ++V WNTII++ AQHG ++A+ F M G
Sbjct: 354 SSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGM 413
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
PD IT + LL+AC H+G V E + L+E + +G+IP+ EHY CL+D+L RAG +
Sbjct: 414 KPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLM 473
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
+ MP + + +W +LL C ++ N+E G A+K+ ELDPQ+SA YV+LS+++AA G
Sbjct: 474 NQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVG 533
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
W V VR LM E+ V K A SWIEI NKVH F D HP + I+L LK+ + M+
Sbjct: 534 RWELVENVRQLMNERHVRKDRAISWIEIENKVHSFTASDRLHPLKEVIYLALKQLAGHME 593
Query: 582 SV 583
V
Sbjct: 594 EV 595
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 285/521 (54%), Gaps = 15/521 (2%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF---QSMPVK-NIVSWNCMIA 120
+++ AR LFD V WNAI GY+ N F +E LF +SM V+ N ++ ++
Sbjct: 72 QMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLK 131
Query: 121 GC------IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
C ++ + I + + E N +I + + A +LF M RN+
Sbjct: 132 SCAKIGAFVEGEEIH--CEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNI 189
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
+++T+M+ G++ V AR L D ++VV W +M++GY++ AR+LF MP
Sbjct: 190 VAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYR 249
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D + M+ G+ G +E LFE + ++ S+N +I GYA NG E LR F
Sbjct: 250 DTMSW--NTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKR 307
Query: 295 M-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M I + P+DATLV+V +AC+ L L+ G+ HV GF+ ++ V NA+I MYS+CG
Sbjct: 308 MLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCG 367
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ F + +L++WN++I A HG AL F QM +NG PDGITF+ +L
Sbjct: 368 LIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLC 427
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
+C H G V E F MV Y I P EHY C+VD+ RAG L++A + + MP EAD
Sbjct: 428 SCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADA 487
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+W +LL AC I N++L ELA +K+ L+P+N A YV+LSN+Y G W+DV R+++LM
Sbjct: 488 VIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILM 547
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
++ G K S IE+ + V F D H +I+ LK
Sbjct: 548 RDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLK 588
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 225/476 (47%), Gaps = 54/476 (11%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV I S I +A +LF M ++++ W ++I+GY + ++ LF P +
Sbjct: 159 FVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPER 218
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
++V WN M++G I+ + A F MP R+T ++N M++G+ +G +E +LFE+MP
Sbjct: 219 DVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMP 278
Query: 171 RRNVISYTAMLDGFMKKG---EVDKA--RALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
RNV S+ ++ G+ G EV + R L D + N + +++ + +
Sbjct: 279 ERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGK 338
Query: 226 --ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
++ + +++V A+I + K G++ENA +FE + KD +++N+MI G A +G
Sbjct: 339 WVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHG 398
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+AL LF M +PD T + V +C+ L L+ EG S N
Sbjct: 399 CGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEG---------------TSYFN 443
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
+++ YS +P + + ++ F + G ++A+ F +M + +
Sbjct: 444 SMVNEYSI---------------APQIEHYGCMVDLFGRAGLLDRAIEFVKRMPM---EA 485
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGII--PSSEHYTCLVDILSRAGQLEKAW 461
D + + +LL AC ++ +++DL EL ++ ++ + +Y L +I G+ +
Sbjct: 486 DAVIWAALLGAC----RIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVA 541
Query: 462 QITQGMPFEADTGVWGSLLAAC-VINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
++ M DTG L C +I +N + E + + E Q+ +Y +L L
Sbjct: 542 RLKILM---RDTG--SKKLPGCSLIEVNDSVVEFYS--LDERHSQSKEIYGVLKGL 590
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ N +V ++T + + + +AR LF+ +NA+ GY N E + LF
Sbjct: 53 FQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFG 112
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M MD++P+ T V +C+ + EG + H VI+ G E N V +I +YS
Sbjct: 113 KMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGR 172
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAF 380
I + F + N+V+W ++I+ +
Sbjct: 173 AIGSAYKLFVGMLERNIVAWTSMISGY 199
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V NA I S+ G I A ++F+ M KD+ITWN++I G +G ++ LF M +
Sbjct: 353 IYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKI 412
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLE 160
+ +++ ++ C +++ YF +M + Y M+ F + G L+
Sbjct: 413 NGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLD 472
Query: 161 EATRLFEQMP-RRNVISYTAML 181
A ++MP + + + A+L
Sbjct: 473 RAIEFVKRMPMEADAVIWAALL 494
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+S+ +C + LL ++ +I +GF+ N V V+T + + + F
Sbjct: 28 FISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 84
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
P + WN I + + Y + + F +M P+ TF +L +C G E +
Sbjct: 85 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 144
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ ++K G+ + T L+D+ S + A+++ GM E + W S+++ ++
Sbjct: 145 IHCEVIK-GGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGM-LERNIVAWTSMISGYILC 202
Query: 487 LNVELGELAAKKMRELDPQNSAV 509
V L A+++ +L P+ V
Sbjct: 203 NRVAL----ARRLFDLAPERDVV 221
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 194/580 (33%), Positives = 305/580 (52%), Gaps = 58/580 (10%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTK-------------DVITWNAIITGYWQNGFLQE 99
NN +A + AG SAA L D + K DV ++++ Y + GF+ +
Sbjct: 112 NNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFD 171
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN----------------- 142
++ LF MP +N VSW MI+G +D D A + F+ M
Sbjct: 172 ARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTS 231
Query: 143 ----------------------TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
+ NA+++ + K G L++A R FE +N I+++AM
Sbjct: 232 DVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAM 291
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN-ERFC---EAREL--FYRMPDY 234
+ G+ + G+ DKA L + M V+ + G + C E +++ F +
Sbjct: 292 VTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGF 351
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
++V++A++ + K G L +AR FE +Q D V + ++I GY QNG E L L+
Sbjct: 352 GLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGK 411
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + P++ T+ SV ACS+L L++G+Q H +I+ GF+ V + +A+ MY++CG
Sbjct: 412 MQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGS 471
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ D L F ++ S +++SWN +I+ +Q+GH KAL F +M L G PD +TF++LLSA
Sbjct: 472 LDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSA 531
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V+ + F++M + I P EHY C+VDILSRAG+L +A + + +
Sbjct: 532 CSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLC 591
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+W LL AC + N ELG A +K+ EL S+ YV+LS++Y A G +V RVR +MK
Sbjct: 592 LWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMK 651
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
+GV K+ SWIE+ VH F+ GD HP +D+I LEL+
Sbjct: 652 ARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELE 691
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 178/360 (49%), Gaps = 37/360 (10%)
Query: 140 ERNTATYNAMISGFLKHGRLEE---ATRLFEQMPR-RNVISYTAMLDGFMKKGEVDKARA 195
+++ ++N++I+ F ++ A LF +M R NVI L G A
Sbjct: 76 DKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSA-----ASN 130
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
LSD ++ K S V TG C +V+V ++++ +CK G +
Sbjct: 131 LSDVVAGKQAHSVAVK-TG-------CSG------------DVYVGSSLLNMYCKTGFVF 170
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+AR LF+R+ ++ VS+ MI+GYA + +A++A+ +F M + + ++ L SV +A +
Sbjct: 171 DARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALT 230
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+ + GRQ H L I+NG A VSV NA++TMY++CG + D+ F N ++W+
Sbjct: 231 SDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSA 290
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
++ +AQ G +KAL F++M +G P T + +++AC V E + K+
Sbjct: 291 MVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKL- 349
Query: 436 GIIPSSEHYTCLVDILSRAGQL---EKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
G + +VD+ ++ G L K ++ Q + D +W S++ V N + E G
Sbjct: 350 GFGLQLYVLSAVVDMYAKCGSLADARKGFECVQ----QPDVVLWTSIITGYVQNGDYEGG 405
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 196/643 (30%), Positives = 322/643 (50%), Gaps = 120/643 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V NA I + G + A+++ + MT KD ++WN+IIT NG + E+ +L ++M +
Sbjct: 169 VYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLL 228
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTA--------------- 144
N+V+W+ +I G N ++ + F M P+ T
Sbjct: 229 SELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFV 288
Query: 145 ------------------TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
NA++ + + G ++ A ++F + R+ SY M+ G+++
Sbjct: 289 GKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLE 348
Query: 187 KGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELFYRM------PD--- 233
G V KA+ L M + V +SW MI+G+V N F +A LF + PD
Sbjct: 349 NGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFT 408
Query: 234 ----------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
N FV A++ +CK + A++ F+ I
Sbjct: 409 LGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEIS 468
Query: 266 PKDCVSFNAMIAGYA-----------------------------------QNGVAEEALR 290
+D ++NA+I+GYA +N + A++
Sbjct: 469 ERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQ 528
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
LF+ M ++PD T+ + ACS L ++ G+Q H IR G++++ + ++ MY+
Sbjct: 529 LFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYA 588
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG I + +I +PNLV N ++ A+A HGH E+ ++ F +M + PD +TFLS
Sbjct: 589 KCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLS 648
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+LS+C HAG + + F LM + Y I P+ +HYTC+VD+LSRAG+L++A+Q+ + MP E
Sbjct: 649 VLSSCVHAGSIKIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPME 707
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
AD+ W +LL C I+ V LGE+AA+K+ EL+P N+ YV+L+NLYA+AG W D+ + R
Sbjct: 708 ADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTR 767
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
LM ++G+ K SWIE + VH FL D SH +++I+ L
Sbjct: 768 ELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFML 810
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 206/468 (44%), Gaps = 84/468 (17%)
Query: 64 GKISAARQLFDQMTTKDVIT----WNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
G + RQ+ + +T NA+I Y + G L E+K + + M K+ VSWN +I
Sbjct: 148 GDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSII 207
Query: 120 AGCIDNDRIDDAFDYFQAM----PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
C+ N + +A D + M E N T++A+I GF + E+ LF +M
Sbjct: 208 TACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARM------ 261
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM---ITGY-VKNERF-----CEARE 226
+ G AR L+ + + + W + + GY V++E F A
Sbjct: 262 ---------VGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALV 312
Query: 227 LFYRMPDYDKNVFVV------------TAMITGFCKVGMLENARLLFERIQ----PKDCV 270
YR K+ F + MI G+ + G + A+ LF +++ +D +
Sbjct: 313 GMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRI 372
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+N MI+G+ N + ++AL LF ++ ++PD TL S+ T + + + +G++ H +
Sbjct: 373 SWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIA 432
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH------------------------ 366
I G ++N V A++ MY +C I+ +++AF +I
Sbjct: 433 IVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIR 492
Query: 367 -----------SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
PN+ +WN+I+A ++ Y+ A+ F++M ++ PD T +L+AC
Sbjct: 493 ELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAAC 552
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
++ + ++ G + LVD+ ++ G ++ +Q+
Sbjct: 553 SKLATIHRGKQVHAYSIRA-GYDSDAHIGATLVDMYAKCGSIKHCYQV 599
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 241/558 (43%), Gaps = 91/558 (16%)
Query: 18 PPILRILSTP---DSCGNFTPHSSNCL----------IRLFSTQYVFVNNAKISALSRAG 64
PP +L TP + + SSN L I+ + FV + S
Sbjct: 21 PPNFSLLHTPPLTSTTYSTILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINS 80
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
A +FD+MT K++ +W A++ + G + LF+
Sbjct: 81 SFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLC--------------- 125
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAM 180
D + + D+F + +++ G LE ++ + + NV A+
Sbjct: 126 -DGLGEKLDFF---------VFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNAL 175
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
+D + K G +D+A+ + + M+ K+ VSW +IT V N EA +L
Sbjct: 176 IDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDL------------- 222
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
LEN +L ++P + V+++A+I G++ N E++ LF+ M+ +
Sbjct: 223 -------------LEN--MLLSELEP-NVVTWSAVIGGFSSNAYDVESVELFARMVGAGV 266
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
PD TL SV ACS ++ L G++ H ++R+ +N V NA++ MY RCG + +
Sbjct: 267 APDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFK 326
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + S+NT+I + ++G+ KA F QM G + D I++ ++S GH
Sbjct: 327 IFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMIS--GHVDN 384
Query: 421 --VNESMDLFELMVKVYGIIPSS----EHYTCLVDILS-RAGQLEKAWQITQGMPFEADT 473
++++ LF ++ + GI P S T D+ R G+ + I +G+ ++++
Sbjct: 385 FMFDDALMLFRDLL-MEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGL--QSNS 441
Query: 474 GVWGSLLAACVINLNVELGELAAKKMR--ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
V G+L + + + ++ A +M E+ ++++ + L + YA + +
Sbjct: 442 FVGGAL-----VEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVE 496
Query: 532 LMKEQGVTKQCAYSWIEI 549
MK G Y+W I
Sbjct: 497 RMKSDGFEPN-VYTWNSI 513
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 22/255 (8%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L G+Q H I+ GF + V ++ MYS D+ F ++ NL SW ++
Sbjct: 47 LTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRL 106
Query: 380 FAQHGHYEKALIFFSQMGLNGFDP--DGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
G + K + F + +G D F +L+ C G + + +++K +G
Sbjct: 107 HLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLK-HGF 165
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV--ELGELA 495
+ + L+D+ + G L++A ++ +GM + D W S++ ACV N V L L
Sbjct: 166 VTNVYVGNALIDMYGKCGSLDEAKKVLEGMT-QKDCVSWNSIITACVANGVVYEALDLLE 224
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG------------VTKQCA 543
+ EL+P ++ + A DV V L + G V C+
Sbjct: 225 NMLLSELEPNVVTWSAVIGGFSSNA---YDVESVELFARMVGAGVAPDARTLASVLPACS 281
Query: 544 -YSWIEIGNKVHYFL 557
W+ +G ++H ++
Sbjct: 282 RMKWLFVGKELHGYI 296
>gi|8671867|gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
gb|AF151215 and contains multiple PPR PF|01535 repeats
[Arabidopsis thaliana]
Length = 816
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 195/557 (35%), Positives = 300/557 (53%), Gaps = 44/557 (7%)
Query: 57 ISALSRAGKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
I+ RAG+ A L+ + K D + N +++GY + G E+ +FQ M VK +VS
Sbjct: 151 ITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVS 210
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR--- 171
+ M+ G RI DA F M ERN T+ AMI G+ K G E+ LF +M +
Sbjct: 211 CSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 172 ---------------RNVISY----------------------TAMLDGFMKKGEVDKAR 194
R+ + Y +++ + K G + +A+
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
A+ M K+ VSW +ITG V+ ++ EA ELF +MP K++ T MI GF G +
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG--KDMVSWTDMIKGFSGKGEI 388
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
LF + KD +++ AMI+ + NG EEAL F M++ ++ P+ T SV +A
Sbjct: 389 SKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSAT 448
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
++L L EG Q H V++ ++SV N++++MY +CG D+ F I PN+VS+N
Sbjct: 449 ASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYN 508
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+I+ ++ +G +KAL FS + +G +P+G+TFL+LLSAC H G V+ F+ M
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS 568
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
Y I P +HY C+VD+L R+G L+ A + MP + +GVWGSLL+A +L V+L EL
Sbjct: 569 YNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAEL 628
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
AAKK+ EL+P ++ YV+LS LY+ G RD R+ + K + + K SWI + +VH
Sbjct: 629 AAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVH 688
Query: 555 YFLGGDMSHPCIDKIHL 571
FL GD S +++I +
Sbjct: 689 NFLAGDESQLNLEEIAI 705
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 216/398 (54%), Gaps = 20/398 (5%)
Query: 70 RQLFDQMTTKDVI-TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
R + TT I N+ I+ + +NG LQE++ +F+ M ++IVSW MI+ +N ++
Sbjct: 38 RNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKM 97
Query: 129 DDAFDYFQAMPERNTATYNAMISGFLKHG-RLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
A+ F MP R T +YNAMI+ +K+ L +A LF +P +N +SY M+ GF++
Sbjct: 98 SKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRA 157
Query: 188 GEVDKARAL--SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
G D+A L + F++ V+ V+++GY++ ++ EA +F M K V ++M+
Sbjct: 158 GRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMA--VKEVVSCSSMV 215
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDD 304
G+CK+G + +AR LF+R+ ++ +++ AMI GY + G E+ LF M + D++ +
Sbjct: 216 HGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNS 275
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
TL +F AC EG Q H LV R E ++ + N++++MYS+ G + +++ F
Sbjct: 276 NTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGV 335
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ + + VSWN++I Q +A F +M D +++ ++ G++++
Sbjct: 336 MKNKDSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKC 391
Query: 425 MDLFELMVKVYGIIPSSEH--YTCLVDILSRAGQLEKA 460
++LF G++P ++ +T ++ G E+A
Sbjct: 392 VELF-------GMMPEKDNITWTAMISAFVSNGYYEEA 422
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 219/502 (43%), Gaps = 112/502 (22%)
Query: 34 TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQ 93
T + N L ++ +F N++IS +R G + A +F QM+ + +++W A+I+ Y +
Sbjct: 34 TQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAE 93
Query: 94 NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND-RIDDAFDYFQAMPERNTATYNAMISG 152
NG + ++ +F MPV+ S+N MI I N + A++ F +PE+N +Y MI+G
Sbjct: 94 NGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITG 153
Query: 153 FLKHGRLEEA---------------------------------TRLFEQMPRRNVISYTA 179
F++ GR +EA R+F+ M + V+S ++
Sbjct: 154 FVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSS 213
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------- 231
M+ G+ K G + AR+L D M+ +NV++WT MI GY K F + LF RM
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV 273
Query: 232 ------------PDYDK------------------NVFVVTAMITGFCKVGMLENARLLF 261
D+ + ++F+ ++++ + K+G + A+ +F
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
++ KD VS+N++I G Q EA LF M DM
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDM--------------------- 372
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
VS + +I +S G I F + + ++W +I+AF
Sbjct: 373 -----------------VSWTD-MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFV 414
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
+G+YE+AL +F +M P+ TF S+LSA + E + + +VK+ I+
Sbjct: 415 SNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM-NIVNDL 473
Query: 442 EHYTCLVDILSRAGQLEKAWQI 463
LV + + G A++I
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKI 495
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 33/278 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N+ +S S+ G + A+ +F M KD ++WN++ITG Q + E+ LF+ MP
Sbjct: 310 LFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG 369
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K++VSW MI G I + F MPE++ T+ AMIS F+ +G EEA F +M
Sbjct: 370 KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM 429
Query: 170 PRRNVI--SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
++ V SYT F +V+S T + + E ++
Sbjct: 430 LQKEVCPNSYT-----------------------FSSVLSATASLADLI------EGLQI 460
Query: 228 FYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
R+ + ++ V ++++ +CK G +A +F I + VS+N MI+GY+ NG
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFG 520
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++AL+LFS + +P+ T +++ +AC + ++ G
Sbjct: 521 KKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 182/549 (33%), Positives = 305/549 (55%), Gaps = 15/549 (2%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N+ I+A + G + +A LFD+++ DV++WN++I G NGF +F M +
Sbjct: 507 VVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILG 566
Query: 112 I-VSWNCMIA-----GCIDNDRIDDAFDYF--QAMPERNTATYNAMISGFLKHGRLEEAT 163
+ V +++ I N + A F +A N ++ + K G L AT
Sbjct: 567 VEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 626
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK----NE 219
+F +M ++S+T+ + ++++G A L D M K V +T V +
Sbjct: 627 EVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 686
Query: 220 RFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ R++ + N+ V A+I + K G +E ARL+F +I KD VS+N MI
Sbjct: 687 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 746
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GY+QN + EAL LF M K +PDD T+ V AC+ L L++GR+ H ++R G+ +
Sbjct: 747 GYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS 805
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
++ V A++ MY++CG ++ ++L F I +L+SW +IA + HG +A+ F++M
Sbjct: 806 DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMR 865
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
+ G +PD +F +L+AC H+G +NE F M G+ P EHY C+VD+L+R G L
Sbjct: 866 IAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNL 925
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
KA++ + MP + DT +WG LL+ C I+ +V+L E A+ + EL+P N+ YV+L+N+Y
Sbjct: 926 SKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVY 985
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
A A W +V ++R M+++G + SWIE+G K + F+ G+ HP +I + L++ +
Sbjct: 986 AEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLT 1045
Query: 578 VQMKSVDDF 586
+QM++ D F
Sbjct: 1046 MQMQNEDYF 1054
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 224/477 (46%), Gaps = 39/477 (8%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G + R++FD++ V WN +++ Y + G +ES +LF+ M +V NC C+
Sbjct: 418 GDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG-NCYTFTCV 476
Query: 124 DNDRIDDAFDYFQAMPE-----------------RNTATYNAMISGFLKHGRLEEATRLF 166
F A+ + NTA N++I+ + K G +E A LF
Sbjct: 477 --------LKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLF 528
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV-VSWTVMIT-----GYVKNER 220
+++ +V+S+ +M++G + G + M V V T +++ + N
Sbjct: 529 DELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLS 588
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
A F + + V ++ + K G L A +F ++ VS+ + IA Y
Sbjct: 589 LGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYV 648
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
+ G+ +A+ LF M ++PD T+ S+ AC+ L++GR H VI+NG +N+
Sbjct: 649 REGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLP 708
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V NA+I MY++CG + ++ L F +I ++VSWNT+I ++Q+ +AL F M
Sbjct: 709 VTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQ 767
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC-LVDILSRAGQLEK 459
F PD IT +L AC +++ ++ +++ G S H C LVD+ ++ G L
Sbjct: 768 FKPDDITMACVLPACAGLAALDKGREIHGHILR-RGYF-SDLHVACALVDMYAKCGLLVL 825
Query: 460 AWQITQGMPFEADTGVWGSLLAACVIN--LNVELGELAAKKMRELDPQNSAVYVMLS 514
A + +P + D W ++A ++ N + ++ ++P S+ V+L+
Sbjct: 826 AQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILN 881
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 177/382 (46%), Gaps = 39/382 (10%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVI----SYTAMLDGFMKKGEVDKARALSDYMS 201
+N ++S + K G E+ LF++M + V+ ++T +L F G+V + + + Y
Sbjct: 438 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGY-- 495
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
V+ G+ N VV ++I + K G +E+A LF
Sbjct: 496 --------VLKLGF-------------------GSNTAVVNSLIAAYFKFGGVESAHNLF 528
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ + D VS+N+MI G NG + L +F M+ + ++ D TLVSV A + + L+
Sbjct: 529 DELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLS 588
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
GR H ++ F V N ++ MYS+CG + + F ++ +VSW + IAA+
Sbjct: 589 LGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYV 648
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
+ G Y A+ F +M G PD T S++ AC + +++ D+ ++K G+ +
Sbjct: 649 REGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNL 707
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGELAAKKMR 500
L+++ ++ G +E+A + +P + D W +++ N L E EL +
Sbjct: 708 PVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGGYSQNSLPNEALELFLDMQK 766
Query: 501 ELDPQNSAVYVMLSNLYAAAGM 522
+ P + M L A AG+
Sbjct: 767 QFKPDD---ITMACVLPACAGL 785
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 6/239 (2%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ G L R +F++I +N +++ YA+ G E++ LF M K+ + + T
Sbjct: 414 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 473
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
V +AL + E ++ H V++ GF +N +V N++I Y + GG+ + F ++
Sbjct: 474 TCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE 533
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
P++VSWN++I +G L F QM + G + D T +S+L A + G ++ L
Sbjct: 534 PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRAL 593
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV--WGSLLAACV 484
VK L+D+ S+ G L A ++ M DT + W S +AA V
Sbjct: 594 HGFGVKAC-FSEEVVFSNTLLDMYSKCGNLNGATEVFVKM---GDTTIVSWTSTIAAYV 648
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 100/214 (46%), Gaps = 4/214 (1%)
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NA I + + G A+ L + ++ + + SV C+ + L +G++ H ++I
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIIS 397
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
NG + ++ ++ MY CG ++ F +I + + WN +++ +A+ G++ +++
Sbjct: 398 NGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 457
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M G + TF +L GKV E + ++K+ G ++ L+
Sbjct: 458 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKL-GFGSNTAVVNSLIAAYF 516
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ G +E A + + E D W S++ CV+N
Sbjct: 517 KFGGVESAHNLFDELS-EPDVVSWNSMINGCVVN 549
>gi|12324033|gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
Length = 839
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 195/557 (35%), Positives = 300/557 (53%), Gaps = 44/557 (7%)
Query: 57 ISALSRAGKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
I+ RAG+ A L+ + K D + N +++GY + G E+ +FQ M VK +VS
Sbjct: 151 ITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVS 210
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR--- 171
+ M+ G RI DA F M ERN T+ AMI G+ K G E+ LF +M +
Sbjct: 211 CSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 172 ---------------RNVISY----------------------TAMLDGFMKKGEVDKAR 194
R+ + Y +++ + K G + +A+
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
A+ M K+ VSW +ITG V+ ++ EA ELF +MP K++ T MI GF G +
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG--KDMVSWTDMIKGFSGKGEI 388
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
LF + KD +++ AMI+ + NG EEAL F M++ ++ P+ T SV +A
Sbjct: 389 SKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSAT 448
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
++L L EG Q H V++ ++SV N++++MY +CG D+ F I PN+VS+N
Sbjct: 449 ASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYN 508
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+I+ ++ +G +KAL FS + +G +P+G+TFL+LLSAC H G V+ F+ M
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS 568
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
Y I P +HY C+VD+L R+G L+ A + MP + +GVWGSLL+A +L V+L EL
Sbjct: 569 YNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAEL 628
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
AAKK+ EL+P ++ YV+LS LY+ G RD R+ + K + + K SWI + +VH
Sbjct: 629 AAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVH 688
Query: 555 YFLGGDMSHPCIDKIHL 571
FL GD S +++I +
Sbjct: 689 NFLAGDESQLNLEEIAI 705
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 216/398 (54%), Gaps = 20/398 (5%)
Query: 70 RQLFDQMTTKDVI-TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
R + TT I N+ I+ + +NG LQE++ +F+ M ++IVSW MI+ +N ++
Sbjct: 38 RNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKM 97
Query: 129 DDAFDYFQAMPERNTATYNAMISGFLKHG-RLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
A+ F MP R T +YNAMI+ +K+ L +A LF +P +N +SY M+ GF++
Sbjct: 98 SKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRA 157
Query: 188 GEVDKARAL--SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
G D+A L + F++ V+ V+++GY++ ++ EA +F M K V ++M+
Sbjct: 158 GRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMA--VKEVVSCSSMV 215
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDD 304
G+CK+G + +AR LF+R+ ++ +++ AMI GY + G E+ LF M + D++ +
Sbjct: 216 HGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNS 275
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
TL +F AC EG Q H LV R E ++ + N++++MYS+ G + +++ F
Sbjct: 276 NTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGV 335
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ + + VSWN++I Q +A F +M D +++ ++ G++++
Sbjct: 336 MKNKDSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKC 391
Query: 425 MDLFELMVKVYGIIPSSEH--YTCLVDILSRAGQLEKA 460
++LF G++P ++ +T ++ G E+A
Sbjct: 392 VELF-------GMMPEKDNITWTAMISAFVSNGYYEEA 422
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 219/502 (43%), Gaps = 112/502 (22%)
Query: 34 TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQ 93
T + N L ++ +F N++IS +R G + A +F QM+ + +++W A+I+ Y +
Sbjct: 34 TQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAE 93
Query: 94 NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND-RIDDAFDYFQAMPERNTATYNAMISG 152
NG + ++ +F MPV+ S+N MI I N + A++ F +PE+N +Y MI+G
Sbjct: 94 NGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITG 153
Query: 153 FLKHGRLEEA---------------------------------TRLFEQMPRRNVISYTA 179
F++ GR +EA R+F+ M + V+S ++
Sbjct: 154 FVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSS 213
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------- 231
M+ G+ K G + AR+L D M+ +NV++WT MI GY K F + LF RM
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV 273
Query: 232 ------------PDYDK------------------NVFVVTAMITGFCKVGMLENARLLF 261
D+ + ++F+ ++++ + K+G + A+ +F
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
++ KD VS+N++I G Q EA LF M DM
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDM--------------------- 372
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
VS + +I +S G I F + + ++W +I+AF
Sbjct: 373 -----------------VSWTD-MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFV 414
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
+G+YE+AL +F +M P+ TF S+LSA + E + + +VK+ I+
Sbjct: 415 SNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM-NIVNDL 473
Query: 442 EHYTCLVDILSRAGQLEKAWQI 463
LV + + G A++I
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKI 495
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 33/278 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N+ +S S+ G + A+ +F M KD ++WN++ITG Q + E+ LF+ MP
Sbjct: 310 LFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG 369
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K++VSW MI G I + F MPE++ T+ AMIS F+ +G EEA F +M
Sbjct: 370 KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM 429
Query: 170 PRRNVI--SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
++ V SYT F +V+S T + + E ++
Sbjct: 430 LQKEVCPNSYT-----------------------FSSVLSATASLADLI------EGLQI 460
Query: 228 FYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
R+ + ++ V ++++ +CK G +A +F I + VS+N MI+GY+ NG
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFG 520
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++AL+LFS + +P+ T +++ +AC + ++ G
Sbjct: 521 KKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 285/521 (54%), Gaps = 15/521 (2%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF---QSMPVK-NIVSWNCMIA 120
+++ AR LFD V WNAI GY+ N F +E LF +SM V+ N ++ ++
Sbjct: 114 QMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLK 173
Query: 121 GC------IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
C ++ + I + + E N +I + + A +LF M RN+
Sbjct: 174 SCAKIGAFVEGEEIH--CEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNI 231
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
+++T+M+ G++ V AR L D ++VV W +M++GY++ AR+LF MP
Sbjct: 232 VAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYR 291
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D + M+ G+ G +E LFE + ++ S+N +I GYA NG E LR F
Sbjct: 292 DTMSW--NTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKR 349
Query: 295 M-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M I + P+DATLV+V +AC+ L L+ G+ HV GF+ ++ V NA+I MYS+CG
Sbjct: 350 MLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCG 409
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ F + +L++WN++I A HG AL F QM +NG PDGITF+ +L
Sbjct: 410 LIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLC 469
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
+C H G V E F MV Y I P EHY C+VD+ RAG L++A + + MP EAD
Sbjct: 470 SCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADA 529
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+W +LL AC I N++L ELA +K+ L+P+N A YV+LSN+Y G W+DV R+++LM
Sbjct: 530 VIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILM 589
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
++ G K S IE+ + V F D H +I+ LK
Sbjct: 590 RDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLK 630
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 225/476 (47%), Gaps = 54/476 (11%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV I S I +A +LF M ++++ W ++I+GY + ++ LF P +
Sbjct: 201 FVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPER 260
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
++V WN M++G I+ + A F MP R+T ++N M++G+ +G +E +LFE+MP
Sbjct: 261 DVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMP 320
Query: 171 RRNVISYTAMLDGFMKKG---EVDKA--RALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
RNV S+ ++ G+ G EV + R L D + N + +++ + +
Sbjct: 321 ERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGK 380
Query: 226 --ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
++ + +++V A+I + K G++ENA +FE + KD +++N+MI G A +G
Sbjct: 381 WVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHG 440
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+AL LF M +PD T + V +C+ L L+ EG S N
Sbjct: 441 CGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEG---------------TSYFN 485
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
+++ YS +P + + ++ F + G ++A+ F +M + +
Sbjct: 486 SMVNEYSI---------------APQIEHYGCMVDLFGRAGLLDRAIEFVKRMPM---EA 527
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGII--PSSEHYTCLVDILSRAGQLEKAW 461
D + + +LL AC ++ +++DL EL ++ ++ + +Y L +I G+ +
Sbjct: 528 DAVIWAALLGAC----RIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVA 583
Query: 462 QITQGMPFEADTGVWGSLLAAC-VINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
++ M DTG L C +I +N + E + + E Q+ +Y +L L
Sbjct: 584 RLKILM---RDTG--SKKLPGCSLIEVNDSVVEFYS--LDERHSQSKEIYGVLKGL 632
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ N +V ++T + + + +AR LF+ +NA+ GY N E + LF
Sbjct: 95 FQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFG 154
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M MD++P+ T V +C+ + EG + H VI+ G E N V +I +YS
Sbjct: 155 KMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGR 214
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAF 380
I + F + N+V+W ++I+ +
Sbjct: 215 AIGSAYKLFVGMLERNIVAWTSMISGY 241
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V NA I S+ G I A ++F+ M KD+ITWN++I G +G ++ LF M +
Sbjct: 395 IYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKI 454
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLE 160
+ +++ ++ C +++ YF +M + Y M+ F + G L+
Sbjct: 455 NGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLD 514
Query: 161 EATRLFEQMP-RRNVISYTAML 181
A ++MP + + + A+L
Sbjct: 515 RAIEFVKRMPMEADAVIWAALL 536
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+S+ +C + LL ++ +I +GF+ N V V+T + + + F
Sbjct: 70 FISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 126
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
P + WN I + + Y + + F +M P+ TF +L +C G E +
Sbjct: 127 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 186
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ ++K G+ + T L+D+ S + A+++ GM E + W S+++ ++
Sbjct: 187 IHCEVIK-GGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGM-LERNIVAWTSMISGYILC 244
Query: 487 LNVELGELAAKKMRELDPQNSAV 509
V L A+++ +L P+ V
Sbjct: 245 NRVAL----ARRLFDLAPERDVV 263
>gi|345505212|gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica oleracea]
Length = 590
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 181/475 (38%), Positives = 272/475 (57%), Gaps = 23/475 (4%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY 146
I TG W + FLQ NC+I I + A F MPER++ +Y
Sbjct: 133 IKTGTWSDLFLQ-----------------NCLIGLYIKCGFLGFARQVFDRMPERDSVSY 175
Query: 147 NAMISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFK 203
N+MI G++K G +E A LF+ MPR RN+I++ +M+ G+ ++ + VD A L D M K
Sbjct: 176 NSMIDGYVKCGLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVDVAEKLFDEMPEK 235
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+++SW MI GYVK+ R +A+ LF MP D V MI G+ K+G++ A+ LF++
Sbjct: 236 DLISWNSMIGGYVKHGRIEDAKGLFNVMPRRD--VVTWAIMIDGYGKLGLVHVAKTLFDQ 293
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNE 322
+ +D V++N+M++GY QN EAL +F+ M K + PD+ +LV V +A + L L++
Sbjct: 294 MPHRDVVAYNSMMSGYVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAIAQLGRLSK 353
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
H+ ++ F + + A+I MYS+CG I + F I S ++ WN +I A
Sbjct: 354 AIDMHLYIVEKQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAV 413
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P +
Sbjct: 414 HGLGESAFDMLFQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 473
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HY C+VDIL+R+G ++ A + +GMP E + +W + L AC + E GEL AK +
Sbjct: 474 HYGCMVDILARSGSIKLARNLIEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILX 533
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ GMW+DV RVR +MKE+ + K SWIE+ +VH FL
Sbjct: 534 GGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWIELDGRVHEFL 588
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 211/418 (50%), Gaps = 44/418 (10%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LI+ + +F+ N I + G + ARQ+FD+M +D +++N++I GY + G ++ +
Sbjct: 132 LIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPERDSVSYNSMIDGYVKCGLVESA 191
Query: 101 KNLFQSMP--VKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
LF MP +N+++WN MI G D +D A F MPE++ ++N+MI G++KHG
Sbjct: 192 GELFDLMPREKRNLITWNSMIGGYAQRADGVDVAEKLFDEMPEKDLISWNSMIGGYVKHG 251
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
R+E+A LF MPRR+V+++ M+DG+ K G V A+ L D M ++VV++ M++GYV+
Sbjct: 252 RIEDAKGLFNVMPRRDVVTWAIMIDGYGKLGLVHVAKTLFDQMPHRDVVAYNSMMSGYVQ 311
Query: 218 NERFCEARELFYRM-------PD--------------------YDKNVFVV--------- 241
N EA E+F M PD D ++++V
Sbjct: 312 NRYHMEALEVFNHMEKESHLTPDETSLVIVLSAIAQLGRLSKAIDMHLYIVEKQFPLSGK 371
Query: 242 --TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
A+I + K G +++A +FE I+ K +NAMI G A +G+ E A + + +
Sbjct: 372 LGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLFQIERRS 431
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGI-LD 357
++PD T V V ACS L+ EG L+ R + E + ++ + +R G I L
Sbjct: 432 IKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIKLA 491
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL-NGFDPDGITFLSLLSA 414
L PN V W T + A + H +E + + L G++P LS + A
Sbjct: 492 RNLIEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILXGGYNPSSYVLLSNMYA 549
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%)
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+D +N +I ++ +AL L M++ + D +L ACS L + EG Q
Sbjct: 69 EDPFLWNVVIKSHSHGVDPRKALFLLCLMLESSVPVDKFSLSLALKACSRLGFVKEGTQV 128
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H +I+ G +++ + N +I +Y +CG + + F ++ + VS+N++I + + G
Sbjct: 129 HGFLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPERDSVSYNSMIDGYVKCGLV 188
Query: 387 EKALIFFSQM 396
E A F M
Sbjct: 189 ESAGELFDLM 198
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 282/502 (56%), Gaps = 22/502 (4%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N+++ Y + G + ++ +F+ MP +++ SWN M++ R+D A F+ MP+R
Sbjct: 201 NSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIV 260
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD---------------GFMKKGE 189
++NA+I+G+ ++G +A F +M +SY+ M G + G+
Sbjct: 261 SWNAVIAGYNQNGLNAKALWFFSRM-----LSYSTMAPDEFTITSVLSACANLGMVSIGK 315
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
A L M + V+ +I+ Y K+ AR + + D NV TA++ G+
Sbjct: 316 QVHAYILRSRMPYIGQVT-NALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYV 374
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K+G +++AR +F+ + +D V++ AMI GY QNG +EA+ LF MI+ +P+ T+ +
Sbjct: 375 KLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAA 434
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SP 368
V + C++L L G+Q H IR+ E + SV N+++TMY+R G + + F ++H
Sbjct: 435 VLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRK 494
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
V+W ++I A AQHG E A+ F +M G PD ITF+ +LSAC H G V+E F
Sbjct: 495 ETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYF 554
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
+ + +GI+P HY C+VD+L+RAG +A + Q MP E D WGSLL+AC ++ N
Sbjct: 555 QQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKN 614
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
+L ELAA+K+ +DP NS Y LSN+Y+A G W D ++ K++ V K+ +SW
Sbjct: 615 ADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTH 674
Query: 549 IGNKVHYFLGGDMSHPCIDKIH 570
IGN+VH F D+ HP D ++
Sbjct: 675 IGNRVHVFGADDVLHPQRDTVY 696
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 154/589 (26%), Positives = 259/589 (43%), Gaps = 149/589 (25%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L + V V N+ ++ + G AR +F++M + V +WNA+++ G + +
Sbjct: 188 VVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLA 247
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTAT-------- 145
+LF++MP + IVSWN +IAG N A +F M P+ T T
Sbjct: 248 LSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACAN 307
Query: 146 -------------------------YNAMISGFLKHGRLEEATRLFEQ--MPRRNVISYT 178
NA+IS + K G +E A + +Q M NVIS+T
Sbjct: 308 LGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFT 367
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----P-- 232
A+L+G++K G++ AR + D MS ++VV+WT MI GY +N EA ELF M P
Sbjct: 368 ALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEP 427
Query: 233 ------------------DYDKNVF-------------VVTAMITGFCKVGMLENARLLF 261
+Y K + V +++T + + G L AR +F
Sbjct: 428 NSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVF 487
Query: 262 ERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
+R+ K+ V++ +MI AQ+G+ E+A+ LF M+++ ++PD T V V +AC+ + +
Sbjct: 488 DRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFV 547
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-----PNLVSWNT 375
+EG++ F+Q+ P + +
Sbjct: 548 DEGKRY-----------------------------------FQQLQDKHGIVPEMSHYAC 572
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KV 434
++ A+ G + +A F QM + +PD I + SLLSAC +V+++ DL EL K+
Sbjct: 573 MVDLLARAGLFSEAQEFIQQMPV---EPDAIAWGSLLSAC----RVHKNADLAELAAEKL 625
Query: 435 YGIIP-SSEHYTCLVDILSRAGQLEKA---WQITQGMPFEADTGV-WGSLLAACVINLNV 489
I P +S Y+ L ++ S G+ A W+ + + +TG W ++
Sbjct: 626 LSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSW--------THIGN 677
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
+ A + L PQ VY AA MW D+ + + Q V
Sbjct: 678 RVHVFGADDV--LHPQRDTVY------RTAAKMWDDIKKAGFVPDLQSV 718
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 196/428 (45%), Gaps = 78/428 (18%)
Query: 130 DAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+A F +P +RN T+N+++S + K GRL +A +F +MP R+ +S+T M+ G +
Sbjct: 81 EARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRV 140
Query: 188 GEVDKARAL-----SDYMS-----FKNVVSWTV--------------------------- 210
G +A + +D +S NV+S
Sbjct: 141 GRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVA 200
Query: 211 --MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
++ Y K AR +F RMP +++V AM++ +G ++ A LFE + +
Sbjct: 201 NSVLNMYGKCGDAETARAVFERMP--ERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRT 258
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSH 327
VS+NA+IAGY QNG+ +AL FS M+ M PD+ T+ SV +AC+ L +++ G+Q H
Sbjct: 259 IVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVH 318
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ----------------------- 364
++R+ V NA+I+MY++ G + ++ +Q
Sbjct: 319 AYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGD 378
Query: 365 ----------IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + ++V+W +I + Q+GH ++A+ F M +G +P+ T ++LS
Sbjct: 379 MKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSV 438
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C + + ++ SS +V + +R+G L A ++ + + +T
Sbjct: 439 CASLACLEYGKQIHCKAIRSLQ-EQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETV 497
Query: 475 VWGSLLAA 482
W S++ A
Sbjct: 498 TWTSMIVA 505
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 135/278 (48%), Gaps = 35/278 (12%)
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
F EAR LF +P +NVF ++++ + K G L +AR +F + +D VS+ M+ G
Sbjct: 79 FREARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLN 138
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
+ G EA+++F M+ + P TL +V ++C+A + GR+ H V++ G + V
Sbjct: 139 RVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVP 198
Query: 341 VCNAVITMYSRCGGI-----------------------LDSELA--------FRQIHSPN 369
V N+V+ MY +CG LD+ L F +
Sbjct: 199 VANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRT 258
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
+VSWN +IA + Q+G KAL FFS+M + PD T S+LSAC + G V+ +
Sbjct: 259 IVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVH 318
Query: 429 ELMVKVYGIIPSSEHYT-CLVDILSRAGQLEKAWQITQ 465
+++ +P T L+ + +++G +E A + Q
Sbjct: 319 AYILR--SRMPYIGQVTNALISMYAKSGSVENARGVMQ 354
>gi|225437951|ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Vitis vinifera]
Length = 743
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 306/561 (54%), Gaps = 47/561 (8%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N+ + L R+G++ AR++F++M K ++WN +I GY ++ ++E++ LF M +N+V
Sbjct: 173 NSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNVV 232
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM---- 169
+W MI+G + + + FQ MPERN ++ AMI GF +G +EA LF +M
Sbjct: 233 TWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALLLFLEMKGNY 292
Query: 170 ---PRRNV---ISYTAMLDGFMKKGEVDKARALSD------------------------- 198
P ++Y GF G A + +
Sbjct: 293 DMKPNDETFISLAYACAGIGFPHLGMQFHAHLIINCWDYDDYDGRLFKSLIHMYSMFGFM 352
Query: 199 ----YMSFKNVVSWTV-----MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
Y+ F+N +S+ MI GY++ + +A+ LF +P DK + T+MI G+
Sbjct: 353 DFAWYIFFRNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISW--TSMINGYF 410
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
VG + A LF + +D V++ M++G+ QN + EA LFS M + P ++T
Sbjct: 411 NVGQIAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSI 470
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ A A+ L++GRQ H L+++ FE ++ + N++I+MY++CG I D+ F ++ S +
Sbjct: 471 LLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRD 530
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
L+SWN++I F+ HG +AL F M +G P+ +TFL +LSAC HAG +N+ +LF+
Sbjct: 531 LISWNSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFD 590
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL-N 488
M V+ I P EHY C+V++L RAG++E+A + +PFE D +WG+LL C + N
Sbjct: 591 AMSDVFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIWGALLGVCGFGMIN 650
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
+ AAK++ ELDP N+ +V+L N++A+ G + ++R M +GV K SWI
Sbjct: 651 TGVARRAAKRLLELDPLNAPAHVVLCNIHASIGQRAEEGQLRKEMGLKGVRKVPGCSWIL 710
Query: 549 IGNKVHYFLGGDMSHPCIDKI 569
+ + + FL GD HP D++
Sbjct: 711 LKGEPYVFLSGDRIHPQADEM 731
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 153/518 (29%), Positives = 258/518 (49%), Gaps = 59/518 (11%)
Query: 24 LSTPDSCGNFTPHSSNCLIRLFSTQYV---FVNNAKISALSRAGKISAARQLFDQMTTKD 80
LS+ C F H I L T Y F ++ + LS+ ++ AR + D+M +
Sbjct: 13 LSSNLYCRRFHVHRFKPQIPLSGTHYSKLRFDDSQILECLSQQ-RLREARHMLDEMPNRG 71
Query: 81 V----ITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
V + W ++++ + +NGF+ E++ LF+ MP +N+V++N M++G + R+ DA +F+
Sbjct: 72 VLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDACRFFE 131
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
MPERN ++ +++ G GR+ EA LF MP RNV+S+ +ML G ++ G++++AR +
Sbjct: 132 EMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRV 191
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+ M K+ VSW VMI GY ++ R EAR LF M D+NV T+MI+G+C+ G ++
Sbjct: 192 FNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMG--DRNVVTWTSMISGYCRAGNVQE 249
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACS 315
LF+++ ++ VS+ AMI G+A NG +EAL LF M DM+P+D T +S+ AC+
Sbjct: 250 GYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALLLFLEMKGNYDMKPNDETFISLAYACA 309
Query: 316 ALQLLNEGRQSHVLVI-----------------------------------RNGFEANVS 340
+ + G Q H +I RN N
Sbjct: 310 GIGFPHLGMQFHAHLIINCWDYDDYDGRLFKSLIHMYSMFGFMDFAWYIFFRNSMSYNTQ 369
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
CN++I Y R G + ++ F I + +SW ++I + G KA F+ M
Sbjct: 370 SCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMP--- 426
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
D D + + ++S E+ LF M +V G+ P + ++ L+ L++
Sbjct: 427 -DRDAVAWTVMVSGHVQNELFAEATYLFSEM-RVKGVSPLNSTFSILLGAAGAMAYLDQG 484
Query: 461 WQ---ITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
Q + FE D +L +I++ + GE+
Sbjct: 485 RQFHCLLMKTQFEFDL-----ILQNSLISMYAKCGEIG 517
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 75/144 (52%), Gaps = 14/144 (9%)
Query: 39 NCLIRLFSTQYVF---VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
+CL L TQ+ F + N+ IS ++ G+I A +F +M ++D+I+WN++I G+ +G
Sbjct: 488 HCL--LMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHHG 545
Query: 96 FLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATY 146
E+ +F++M N V++ +++ C ++ ++ F AM + Y
Sbjct: 546 LTSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHY 605
Query: 147 NAMISGFLKHGRLEEATRLFEQMP 170
M++ + G++EEA ++P
Sbjct: 606 VCMVNLLGRAGKVEEAEEFISKLP 629
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 194/637 (30%), Positives = 321/637 (50%), Gaps = 115/637 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI- 112
N I S G ++ ARQ+FD + K V+TWNA+I GY Q G ++E+ LF+ M + +
Sbjct: 96 NTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLE 155
Query: 113 ------------------VSWN------CMIAGCIDNDRI--------------DDAFDY 134
++W + AG + + RI DDA
Sbjct: 156 PSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQV 215
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDG------- 183
F + R+ +T+N M+ G+ K G E+A LF +M + N IS+ ++LDG
Sbjct: 216 FDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEAL 275
Query: 184 ----------------------------FMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
+ G ++ AR + D M ++VVSWTVMI GY
Sbjct: 276 AWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGY 335
Query: 216 VKNERFCEARELFYRM------PD-------------------------------YDKNV 238
+N +A LF M PD + ++
Sbjct: 336 AENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDL 395
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
V TA++ + K G +++AR +F+ + +D VS++AMI Y +NG EA F M +
Sbjct: 396 LVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRS 455
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+++PD T +++ AC L L+ G + + I+ ++V + NA+I M ++ G + +
Sbjct: 456 NIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERA 515
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F + ++++WN +I ++ HG+ +AL F +M F P+ +TF+ +LSAC A
Sbjct: 516 RYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRA 575
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V+E F +++ GI+P+ + Y C+VD+L RAG+L++A + + MP + + +W S
Sbjct: 576 GFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSS 635
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL AC I+ N+++ E AA++ +DP + AVYV LS++YAAAGMW +V +VR +M+ +G+
Sbjct: 636 LLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGI 695
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
K+ +WIE+ KVH F+ D SHP + +I+ EL R
Sbjct: 696 RKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELAR 732
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 130/254 (51%), Gaps = 2/254 (0%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N++ + +I + G + AR +F+ ++ K V++NA+IAGYAQ G +EA LF M+
Sbjct: 91 NIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMV 150
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
++P T +SV ACS+ LN G++ H V+ GF ++ + A+++MY + G +
Sbjct: 151 DEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMD 210
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F +H ++ ++N ++ +A+ G +EKA F +M G P+ I+FLS+L C
Sbjct: 211 DARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCW 270
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
+ + + G++ T L+ + + G +E A ++ M D W
Sbjct: 271 TPEALAWGKAVHAQCMNA-GLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVR-DVVSW 328
Query: 477 GSLLAACVINLNVE 490
++ N N+E
Sbjct: 329 TVMIEGYAENGNIE 342
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D T V +F C+ L+ G+Q +I+ G + N+ N +I +YS CG + ++ F
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+ + +V+WN +IA +AQ GH ++A F QM G +P ITFLS+L AC +N
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
++ +V G + T LV + + G ++ A Q+ G+
Sbjct: 176 WGKEVHAQVVTA-GFVSDFRIGTALVSMYVKGGSMDDARQVFDGL 219
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 320/578 (55%), Gaps = 47/578 (8%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQESKNLFQS 106
F + +SA++ G + R++ Q V N++I Y + G ++E+K +F+
Sbjct: 202 FTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQ 261
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ----AMPERNTATYNAMISGFLKHGRLEEA 162
M +++VSWN ++AG + N+ +A F +M + + +TY+ +I +L A
Sbjct: 262 METRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALA 321
Query: 163 TRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARALSDYM-SFKNVVSWTVMITGYVK 217
+L + + S TA++D + K GE+D A + M +NVVSWT MI G ++
Sbjct: 322 RQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQ 381
Query: 218 NERFCEARELFYRM---------------------------------PDYDKNVFVVTAM 244
N A LF RM +Y V TA+
Sbjct: 382 NADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQIIKTNYQHAPSVGTAL 441
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
+ + K+G E A +F+ I KD V+++AM++ Y+Q G + A +F M M+P++
Sbjct: 442 LASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNE 501
Query: 305 ATLVSVFTAC-SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
T+ S AC S +++GRQ H + I+ ++ + V +A++TMY+R G I + + F
Sbjct: 502 FTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFE 561
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+ +LVSWN++I+ +AQHG+ ++AL F QM G + DG TFL+++ C HAG V E
Sbjct: 562 RQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKE 621
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
F+ MV + I P+ EHY+C+VD+ SRAG+L++ + +GMPF A VW +LL AC
Sbjct: 622 GQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGAC 681
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
++ NVELG+LAA+K+ L+P +SA YV+LSN+YAAAG W++ VR LM + V K+
Sbjct: 682 RVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAG 741
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
SWI+I NKVH F+ D SHP ++I+ +LK + ++K
Sbjct: 742 CSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLK 779
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 150/297 (50%), Gaps = 2/297 (0%)
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDK-NVFVVTAMITGFCKVGMLENARLLFERI 264
VS + + G + + E +D+ V V TA++ + K G +E+ R++FE +
Sbjct: 102 VSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM 161
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
++ V++ +++ GY Q + + LF M + P+ T SV +A ++ ++ GR
Sbjct: 162 PKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGR 221
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
+ H ++ G + V VCN++I MYS+CG + +++ FRQ+ + ++VSWNT++A +
Sbjct: 222 RVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNE 281
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
H +AL F + T+ +++ C + ++ + L ++K +G
Sbjct: 282 HQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLK-HGFHSDGNVM 340
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
T ++D S+ G+L+ A+ I MP + W +++ C+ N ++ L +MRE
Sbjct: 341 TAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMRE 397
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 169/352 (48%), Gaps = 33/352 (9%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF---- 202
A++ ++K G +E+ +FE MP+RNV+++T++L G++ + RA SD M+
Sbjct: 139 TALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYV------QGRACSDVMALFFRM 192
Query: 203 ------KNVVSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGML 254
N ++T +++ R + + + VFV ++I + K G++
Sbjct: 193 RAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLV 252
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E A+ +F +++ +D VS+N ++AG N EAL+LF + +T +V C
Sbjct: 253 EEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLC 312
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSW 373
+ L+ L RQ H V+++GF ++ +V A++ YS+CG + D+ + S N+VSW
Sbjct: 313 ANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSW 372
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+I Q+ A FS+M + P+ T+ ++L+A S+ + +
Sbjct: 373 TAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA---------SIPILLPQIH 423
Query: 434 VYGIIPSSEHY----TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
I + +H T L+ S+ G E+A I + M D W ++L+
Sbjct: 424 AQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFK-MIDHKDVVAWSAMLS 474
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 182/420 (43%), Gaps = 75/420 (17%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C+ F V V A + + G + R +F+ M ++V+TW +++TGY Q +
Sbjct: 125 CVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSD 184
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
LF M + + W N T+ +++S G +
Sbjct: 185 VMALFFRMRAEGV--WP-------------------------NPFTFTSVLSAVASQGAV 217
Query: 160 EEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
+ R+ Q R V ++++ + K G V++A+A+ M +++VSW ++ G
Sbjct: 218 DLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGL 277
Query: 216 VKNERFCEARELFY----RMPDYDKNVF-------------------------------- 239
+ NE EA +LF+ M ++ +
Sbjct: 278 LLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDG 337
Query: 240 -VVTAMITGFCKVGMLENARLLFERIQP--KDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
V+TA++ + K G L++A +F + P ++ VS+ AMI G QN A LFS M
Sbjct: 338 NVMTAIMDAYSKCGELDDAFNIF-LLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMR 396
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ +++P++ T +V TA + L Q H +I+ ++ SV A++ YS+ G
Sbjct: 397 EDNVKPNEFTYSTVLTASIPILL----PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTE 452
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
++ F+ I ++V+W+ +++ ++Q G + A F +M + G P+ T S + AC
Sbjct: 453 EALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACA 512
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFE-ANVSVCNAVITMYSRCGGILDSELAFR 363
A + V C + G Q H L ++ GF+ A V V A++ MY +CGG+ D + F
Sbjct: 100 AAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFE 159
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+ N+V+W +++ + Q + F +M G P+ TF S+LSA G V+
Sbjct: 160 GMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDL 219
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ VK +G + L+++ S+ G +E+A + + M D W +L+A
Sbjct: 220 GRRVHAQSVK-FGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETR-DMVSWNTLMAGL 277
Query: 484 VIN 486
++N
Sbjct: 278 LLN 280
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/640 (30%), Positives = 323/640 (50%), Gaps = 115/640 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V +A I S AG + AR FD M +D + WN ++ GY + G + + LF++M V
Sbjct: 176 VYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRV 235
Query: 110 K----NIVSWNCMIAGCIDNDRI-----------------------------------DD 130
N + C ++ C + DD
Sbjct: 236 SGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDD 295
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR------------------- 171
A+ F+ +P + T+N MISG +++G L+EA LF M R
Sbjct: 296 AWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTD 355
Query: 172 ---------------RNVIS-----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
RN + +A++D + K +V AR L D +VV + +
Sbjct: 356 LNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTV 415
Query: 212 ITGYVKNERFCEARELFYRMPD-------------------------------------Y 234
I+GYV N +A ++F + + Y
Sbjct: 416 ISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAY 475
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ +V +A++ + K G L+ + +F ++ KD V++N+MI+ ++QNG +EAL LF
Sbjct: 476 EGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQ 535
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M ++ ++ T+ S +AC++L + G++ H ++I+ +A++ +A+I MY++CG
Sbjct: 536 MCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGN 595
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F + N VSWN+II+A+ HG ++++ F +M G+ PD +TFL+L+SA
Sbjct: 596 MELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISA 655
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C HAG V E + LF+ M K Y I P EH+ C+VD+ SR+G+L+KA Q MPF+ D G
Sbjct: 656 CAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAG 715
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+WG+LL AC ++ NVEL ++A++++ +LDP NS YV++SN+ A AG W V++VR LMK
Sbjct: 716 IWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMK 775
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
+ + K YSW+++ N H F+ D SHP + I+ LK
Sbjct: 776 DNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLK 815
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 226/451 (50%), Gaps = 49/451 (10%)
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
DV +A+I Y G L+++++ F MP ++ V WN M+ G I + A F+
Sbjct: 173 ASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRN 232
Query: 138 MP---------------------------------------ERNTATYNAMISGFLKHGR 158
M E+ A N ++S + K
Sbjct: 233 MRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRC 292
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM----SFKNVVSWTVMITG 214
L++A RLFE +PR +++++ M+ G ++ G +D+A L M + + V+ ++
Sbjct: 293 LDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPA 352
Query: 215 YVKNERFCEARELF-YRMPD-YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ +E+ Y + + + F+V+A++ + K + AR L++ + D V
Sbjct: 353 LTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIG 412
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
+ +I+GY NG++E+AL++F +++ ++P+ T+ SV AC+++ L G++ H V+R
Sbjct: 413 STVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLR 472
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
N +E V +A++ MY++CG + S F ++ + V+WN++I++F+Q+G ++AL
Sbjct: 473 NAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDL 532
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDIL 451
F QM + G + +T S LSAC + ++ +++K G I + + L+D+
Sbjct: 533 FRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIK--GPIKADIFAESALIDMY 590
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ G +E A ++ + MP + + W S+++A
Sbjct: 591 AKCGNMELALRVFEFMPDKNEVS-WNSIISA 620
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 135/299 (45%), Gaps = 42/299 (14%)
Query: 127 RIDDAFDYFQAMPERNTAT---YNAMISGFLKHGRLEEATRLFEQM--------PRRNVI 175
R DA F A+P + +N +I GF G A + +M P + +
Sbjct: 85 RFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTL 144
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
Y V K+ A +S +V T TG +
Sbjct: 145 PY------------VVKSCAALGAVSLGRLVHRTARATGLASD----------------- 175
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
V+V +A+I + G+L +AR F+ + +DCV +N M+ GY + G A+RLF M
Sbjct: 176 --VYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNM 233
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+P+ ATL + C+A L G Q H L ++ G E V+V N +++MY++C +
Sbjct: 234 RVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCL 293
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
D+ F + +LV+WN +I+ Q+G ++AL F M +G PD +T +SLL A
Sbjct: 294 DDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPA 352
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM--QPDDATLVSVFTACSALQ 318
R + +N +I G+ G A+ + M PD TL V +C+AL
Sbjct: 96 LPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALG 155
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
++ GR H G ++V V +A+I MYS G + D+ AF + + V WN ++
Sbjct: 156 AVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMD 215
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+ + G A+ F M ++G +P+ T LS C + + L L VK G+
Sbjct: 216 GYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKC-GLE 274
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
L+ + ++ L+ AW++ + +P + D W +++ CV N
Sbjct: 275 QEVAVANTLLSMYAKCRCLDDAWRLFELLPRD-DLVTWNGMISGCVQN 321
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 10/182 (5%)
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEAN---VSVCNAVITMYSRCGGILDSELAFR 363
L+++ C + L G Q H + +G +N +++ ++ MY D+ F
Sbjct: 35 LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFS 94
Query: 364 QIH---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN--GFDPDGITFLSLLSACGHA 418
+ + + + WN +I F GH+ A++F+ +M + PD T ++ +C
Sbjct: 95 ALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAAL 154
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V+ L + G+ + L+ + S AG L A GMP+ D +W
Sbjct: 155 GAVSLG-RLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWR-DCVLWNV 212
Query: 479 LL 480
++
Sbjct: 213 MM 214
>gi|302760949|ref|XP_002963897.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
gi|300169165|gb|EFJ35768.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
Length = 714
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 289/548 (52%), Gaps = 6/548 (1%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N ISA +R G ++ AR LF+ M +D TWN +I GY Q ++ +F PV+N+V
Sbjct: 89 NTLISAFARQGNLAEARNLFNSMKIRDAATWNVLIAGYTQRCLCTHAREIFDRAPVRNVV 148
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+WN MI G +D+A + F MP+ N +NA+ISG ++ RL +A LF+ +P R+
Sbjct: 149 TWNTMIGGYAQAGHLDNATELFGLMPQWNEVCWNALISGMGRNRRLPDALELFQALPFRD 208
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
++S+ AM+ G + G++ +A L M +VV WT ++T + + EAR+LF +P
Sbjct: 209 MVSWIAMIQGCVHSGDLHRAWDLFKRMPLTDVVIWTAIVTAFAHSGFLQEARDLFDAIPI 268
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQP-KDCVSFNAMIAGYAQNGVAEEALRLF 292
D G G + A+ LF+ +D +S+NA++A ++QNG A +AL +F
Sbjct: 269 KDAAAVNAMIAAYGL--HGEIARAKDLFDSAGDLRDVISWNALLAAFSQNGHARQALGIF 326
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH---VLVIRNGFEANVSVCNAVITMY 349
+GM + PD + VS AC+ L L EG+ H +L + S+ A++ Y
Sbjct: 327 AGMDLEGIHPDGISFVSALDACTILTALREGKLLHEELLLASQGEIFVEASLATALVNFY 386
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++CG + ++ F + + + N+++ A+AQ G +A F + L+G PD +TF+
Sbjct: 387 AKCGRLDEARSLFDAMAFCDAILLNSMLGAYAQSGRAGEAADLFQRAILSGIHPDAVTFV 446
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
S++SAC HAG ++ F +V + + P + HYTC+VD+L+R G L + MPF
Sbjct: 447 SMVSACSHAGLLDLGHRYFLSLVGDFALAPHAAHYTCMVDLLARTGHLMDGEDLLDAMPF 506
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ + W SLLA C + +V G A++ +P S+ YV+LS LY AAG D V
Sbjct: 507 QPEYTAWKSLLAGCRTHGDVGRGARLARRATNANPVCSSPYVLLSRLYDAAGKHGDGISV 566
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEI 589
R M + + K S I I + H F+ G +HP I I EL + +M+ +
Sbjct: 567 RKAMDARRLRKPAGLSSITIKGRAHEFVAGGKNHPEISAILDELHSLNAKMREAGYVPDT 626
Query: 590 ATSWSSFD 597
+ FD
Sbjct: 627 SNVLHDFD 634
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 132/321 (41%), Gaps = 27/321 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-P 108
V + A ++A + +G + AR LFD + KD NA+I Y +G + +K+LF S
Sbjct: 240 VVIWTAIVTAFAHSGFLQEARDLFDAIPIKDAAAVNAMIAAYGLHGEIARAKDLFDSAGD 299
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN---------TATYNAMISGFLKHGRL 159
+++++SWN ++A N A F M +A I L+ G+L
Sbjct: 300 LRDVISWNALLAAFSQNGHARQALGIFAGMDLEGIHPDGISFVSALDACTILTALREGKL 359
Query: 160 EEATRLFEQMPRRNVIS--YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
L V + TA+++ + K G +D+AR+L D M+F + + M+ Y +
Sbjct: 360 LHEELLLASQGEIFVEASLATALVNFYAKCGRLDEARSLFDAMAFCDAILLNSMLGAYAQ 419
Query: 218 NERFCEARELFYR--MPDYDKNVFVVTAMITGFCKVGMLENARLLFERI-----QPKDCV 270
+ R EA +LF R + + +M++ G+L+ F +
Sbjct: 420 SGRAGEAADLFQRAILSGIHPDAVTFVSMVSACSHAGLLDLGHRYFLSLVGDFALAPHAA 479
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+ M+ A+ G + L M QP+ S+ C + G + +
Sbjct: 480 HYTCMVDLLARTGHLMDGEDLLDA---MPFQPEYTAWKSLLAGCRTHGDVGRGAR----L 532
Query: 331 IRNGFEANVSVCNAVITMYSR 351
R AN VC++ + SR
Sbjct: 533 ARRATNAN-PVCSSPYVLLSR 552
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY RCG + D+ + F I +P S N ++AA+AQ+G+ + A F + + D ++
Sbjct: 1 MYGRCGCVADAVICFDSIRNPTAFSHNVMVAAYAQNGYLDLAARTFDRTP----NKDVVS 56
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+ +LS G ++ F+ M ++ Y L+ +R G L +A + M
Sbjct: 57 WNGMLSGYARYGSFRDAKLFFDEMP-----YKNTVSYNTLISAFARQGNLAEARNLFNSM 111
Query: 468 PFEADTGVWGSLLAA 482
D W L+A
Sbjct: 112 KIR-DAATWNVLIAG 125
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 313/601 (52%), Gaps = 69/601 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTK---DVITWNAIITGYWQNGFLQESKNLFQS 106
VFV N +S R G ARQ+FD+M + D+++WN+I+ Y Q G + +F+
Sbjct: 180 VFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFER 239
Query: 107 M-----------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK 155
M + N++ C G + + + E + NA++ + K
Sbjct: 240 MTEDLGIRPDAVSLVNVLP-ACASVGAWSRGKQVHGYALRSGLFE-DVFVGNAVVDMYAK 297
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVM 211
G +EEA ++FE+M ++V+S+ AM+ G+ + G D A L + + + NVV+W+ +
Sbjct: 298 CGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAV 357
Query: 212 ITGYVKNERFCEARELFYRM---------------------------------------- 231
I GY + EA ++F +M
Sbjct: 358 IAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWIL 417
Query: 232 ----PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD--CVSFNAMIAGYAQNGVA 285
D ++ V+ A+I + K + AR +F+ I PKD V++ +I G AQ+G A
Sbjct: 418 NLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEA 477
Query: 286 EEALRLFSGMIKMD--MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE-ANVSVC 342
EAL LFS M++ D + P+ T+ AC+ L L GRQ H V+RN FE A + V
Sbjct: 478 NEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVA 537
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
N +I MYS+ G + + + F +H N VSW +++ + HG E+AL F +M
Sbjct: 538 NCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLV 597
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
PDG+TF+ +L AC H+G V++ ++ F M K +G++P +EHY C+VD+LSRAG+L++A +
Sbjct: 598 PDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAME 657
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ +GMP + VW +LL+AC + NVELGE AA ++ EL+ N Y +LSN+YA A
Sbjct: 658 LIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARC 717
Query: 523 WRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
W+DV R+R LMK G+ K+ SW++ F GD SHP +I+ L+ ++K+
Sbjct: 718 WKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKA 777
Query: 583 V 583
+
Sbjct: 778 L 778
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 214/494 (43%), Gaps = 83/494 (16%)
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------------- 107
S A +S R+L ++ V WN +I GFL++ L++ M
Sbjct: 92 SPAKALSVLRRL--HPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFP 149
Query: 108 ----------------PVKNIV-----SWNCMIAGCIDN-----DRIDDAFDYFQAMPER 141
V +V WN + + + ++A F M ER
Sbjct: 150 FVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRER 209
Query: 142 NTA---TYNAMISGFLKHGRLEEATRLFEQMP-----RRNVISYTAMLDGFMKKGEVDKA 193
++N++++ +++ G A ++FE+M R + +S +L G +
Sbjct: 210 GVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRG 269
Query: 194 RALSDYM----SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
+ + Y F++V ++ Y K EA ++F RM K+V AM+TG+
Sbjct: 270 KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK--VKDVVSWNAMVTGYS 327
Query: 250 KVGMLENARLLFERIQPK----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
++G ++A LFE+I+ + + V+++A+IAGYAQ G+ EAL +F M+ +P+
Sbjct: 328 QIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVV 387
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIR-------NGFEANVSVCNAVITMYSRCGGILDS 358
TLVS+ + C++ L G+++H I+ N ++ V NA+I MYS+C +
Sbjct: 388 TLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 447
Query: 359 ELAFRQIHSPN--LVSWNTIIAAFAQHGHYEKALIFFSQM--GLNGFDPDGITFLSLLSA 414
F I + +V+W +I AQHG +AL FSQM N P+ T L A
Sbjct: 448 RAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMA 507
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEH-----YTCLVDILSRAGQLEKAWQITQGMPF 469
C G + F + Y + E CL+D+ S++G ++ A + M
Sbjct: 508 CARLGALR-----FGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM-- 560
Query: 470 EADTGV-WGSLLAA 482
GV W SL+
Sbjct: 561 HQRNGVSWTSLMTG 574
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 8/247 (3%)
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSF--NAMIAGYAQNGVAEEALRLFSGMIKMD 299
T +I+ + A + R+ P F N +I G E+ L+L+ M ++
Sbjct: 81 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 140
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+PD T V AC + G H +V +GFE NV V N +++MY RCG ++
Sbjct: 141 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 200
Query: 360 LAF---RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSAC 415
F R+ +LVSWN+I+AA+ Q G +A+ F +M + G PD ++ +++L AC
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 260
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
G + + ++ G+ +VD+ ++ G +E+A ++ + M + D
Sbjct: 261 ASVGAWSRGKQVHGYALRS-GLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK-DVVS 318
Query: 476 WGSLLAA 482
W +++
Sbjct: 319 WNAMVTG 325
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F + +FV N I S++G + AAR +FD M ++ ++W +++TGY +G +E+ +F
Sbjct: 529 FESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIF 588
Query: 105 QSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLK 155
M V + V++ ++ C + +D +YF M + Y M+ +
Sbjct: 589 YEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSR 648
Query: 156 HGRLEEATRLFEQMPRR 172
GRL+EA L MP +
Sbjct: 649 AGRLDEAMELIRGMPMK 665
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 199/585 (34%), Positives = 315/585 (53%), Gaps = 25/585 (4%)
Query: 17 FPPILRILSTPDSCGNFTPHSS-NCLIRLFSTQY-VFVNNAKISALSRAGKISAARQLFD 74
FPP+L+ +CG +C Q+ VFV + I SR G AR LFD
Sbjct: 221 FPPVLK------ACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 274
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDD 130
M +D+ +WNA+I+G QNG ++ ++ M ++ N V+ ++ C I
Sbjct: 275 DMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIST 334
Query: 131 A----FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
A + E + NA+I+ + K G LE+A + F+QM +V+S+ +++ + +
Sbjct: 335 AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQ 394
Query: 187 KGEVDKARALSDYM---SFKNVVSWTVMITGYVKNERFCE----ARELFYRMPDYDKNVF 239
+ A M F+ + V + V R C+ R ++V
Sbjct: 395 NDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVV 454
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-M 298
+ A++ + K+G+L++A +FE I KD +S+N +I GYAQNG+A EA+ ++ M +
Sbjct: 455 IGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECK 514
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++ P+ T VS+ A + + L +G + H VI+ +V V +I +Y +CG ++D+
Sbjct: 515 EIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDA 574
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F Q+ + V+WN II+ HGH EK L F +M G PD +TF+SLLSAC H+
Sbjct: 575 MSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHS 634
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E F LM + YGI PS +HY C+VD+L RAG LE A+ + MP + D +WG+
Sbjct: 635 GFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGA 693
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL AC I+ N+ELG+ A+ ++ E+D +N YV+LSN+YA G W V +VR L +E+G+
Sbjct: 694 LLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGL 753
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
K +S IE+ KV F G+ SHP +I+ EL+ + +MKS+
Sbjct: 754 KKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSL 798
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 18/181 (9%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H L++ G ++ + ++ +Y+ G + S F QI ++ +WN++I+A+ +GH+
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHF 198
Query: 387 EKALIFFSQMGL-NGFDPDGITFLSLLSACG---HAGKVNESMDLFELMVKVYGIIPSSE 442
+A+ F Q+ L + PD TF +L ACG K++ F+L + + +S
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIH--CWAFKLGFQWNVFVAAS- 255
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
L+ + SR G A + MPF D G W ++++ + N N AA+ + L
Sbjct: 256 ----LIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN------AAQALDVL 304
Query: 503 D 503
D
Sbjct: 305 D 305
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 317/586 (54%), Gaps = 23/586 (3%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRL-FSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FPP+LR P + H+ C +RL F + A + A R G++ A + FD+
Sbjct: 74 FPPLLRAAQGPGTAAQL--HA--CALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDE 129
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCID-NDRIDD 130
M +DV WNA+++G +N E+ LF M ++ + V+ + ++ C+ DR
Sbjct: 130 MRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALA 189
Query: 131 AFDYFQAMP---ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ A+ + NAMI + K G LEE ++F+ M R+++++ +++ G +
Sbjct: 190 LAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQG 249
Query: 188 GEVDKAR----ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYD-KNVFV 240
G+V A + D +V++ + + + C R + M +D ++
Sbjct: 250 GQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIA 309
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD- 299
A++ + K+ +E A+ +F+ + +D VS+N +I GY QNG+A EA+ ++ M K +
Sbjct: 310 GNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEG 369
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++P T VSV A S L L +G + H L I+ G +V V VI +Y++CG + ++
Sbjct: 370 LKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAM 429
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
L F Q + WN +I+ HGH KAL FSQM G PD +TF+SLL+AC HAG
Sbjct: 430 LLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAG 489
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
V++ + F +M YGI P ++HY C+VD+ RAGQL+ A+ + MP + D+ +WG+L
Sbjct: 490 LVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGAL 549
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
L AC I+ NVE+G++A++ + ELDP+N YV++SN+YA G W V VR L++ Q +
Sbjct: 550 LGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQ 609
Query: 540 KQCAYSWIEIGNKVHYFLGGDMS--HPCIDKIHLELKRASVQMKSV 583
K +S IE+ V+ F G+ HP ++I EL +++S+
Sbjct: 610 KTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSL 655
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/562 (32%), Positives = 312/562 (55%), Gaps = 16/562 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV ++ ++ +AG + AR++FD+M ++ +TW +I+GY E+ +F+ M
Sbjct: 146 VFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRR 205
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLEE 161
+ N ++ +++ + +D + + NA+++ + K G L++
Sbjct: 206 EEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDD 265
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ ++FE +N I+++AM+ G+ + G+ KA L M F + + G +
Sbjct: 266 SLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSD 325
Query: 222 CEARELFYRMPDY------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
A E ++ +Y + ++++TA++ + K G+ E+AR F +Q D V + +M
Sbjct: 326 ACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSM 385
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAGY QNG E+AL L+ M + P++ T+ SV ACS L ++GRQ H I+ G
Sbjct: 386 IAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGL 445
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
V++ +A+ TMY++CG + + + FR++ +++SWN +I+ +Q+G+ ++AL F +
Sbjct: 446 GLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEE 505
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M PD +TF+++LSAC H G V+ F +M +G++P EHY C+VD+LSRAG
Sbjct: 506 MRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAG 565
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L +A + + + +W LL AC N ELG A +K+ EL Q S+ YV+LS
Sbjct: 566 KLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSG 625
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+Y A G DV RVR +MK +GV+K+ SWIE+ + VH F+ GD HPCI +I E+ R
Sbjct: 626 IYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILR 685
Query: 576 ASVQMKSVDDFVEIATSWSSFD 597
S QMK D+ + A+ S+D
Sbjct: 686 LSKQMK--DEGYQPASVTDSYD 705
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 186/354 (52%), Gaps = 22/354 (6%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV---------DKARA-- 195
N++I+ + K L +A +F+++ ++VIS+ +++G+ ++G + RA
Sbjct: 47 NSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADN 106
Query: 196 -LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
L + +F + + ++ + +A + +M + +VFV ++++ +CK G+L
Sbjct: 107 ILPNAHTFSGIFTAASNLSSIFFGQ---QAHAVAIKMACF-YDVFVGSSLLNMYCKAGLL 162
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
AR +F+R+ ++ V++ MI+GYA +A EA +F M + + ++ SV +A
Sbjct: 163 FEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSAL 222
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ + ++ G+Q H L ++ G +S+ NA++TMY++CG + DS F + N ++W+
Sbjct: 223 AVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWS 282
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I +AQ G KAL FS+M G +P T + +L+AC A V E + ++K+
Sbjct: 283 AMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKL 342
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF--EADTGVWGSLLAACVIN 486
G T LVD+ +++G E A +G + + D +W S++A V N
Sbjct: 343 -GFESQLYIMTALVDMYAKSGVTEDA---RKGFNYLQQPDLVLWTSMIAGYVQN 392
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 187/388 (48%), Gaps = 19/388 (4%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCL-IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
F +L L+ P+ + +CL ++ ++ + NA ++ ++ G + + Q+F+
Sbjct: 215 FTSVLSALAVPEFVD--SGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEM 272
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG----CIDNDRIDDA 131
K+ ITW+A+ITGY Q+G ++ LF M I + G C D +++
Sbjct: 273 SNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEG 332
Query: 132 ---FDYFQAMP-ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+Y + E A++ + K G E+A + F + + +++ +T+M+ G+++
Sbjct: 333 KQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQN 392
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKN----ERFCEARELFYRMPDYDKNVFVV-- 241
GE + A +L M + ++ + + +K F + R++ R Y + V
Sbjct: 393 GENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIG 452
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
+A+ T + K G LE ++F R+ +D +S+NAMI+G +QNG +EAL LF M + D +
Sbjct: 453 SALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTK 512
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDS-E 359
PDD T V+V +ACS + L++ G ++ G V ++ + SR G + ++ E
Sbjct: 513 PDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKE 572
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
L W ++ A + +YE
Sbjct: 573 FIESTTIDHGLCLWRILLGACRNYRNYE 600
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA--LRLFSGM 295
+++ ++I + K L A+L+F+RI KD +S+N +I GY+Q G + + LF M
Sbjct: 43 IYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRM 102
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++ P+ T +FTA S L + G+Q+H + I+ +V V ++++ MY + G +
Sbjct: 103 RADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLL 162
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++ F ++ N V+W T+I+ +A +A F M D + F S+LSA
Sbjct: 163 FEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSAL 222
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
V+ + L VK G++ LV + ++ G L+ + Q+ + M + ++
Sbjct: 223 AVPEFVDSGKQIHCLAVKT-GLLVFLSILNALVTMYAKCGSLDDSLQVFE-MSNDKNSIT 280
Query: 476 WGSLLAA 482
W +++
Sbjct: 281 WSAMITG 287
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 194/572 (33%), Positives = 303/572 (52%), Gaps = 45/572 (7%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNL 103
L +Y+ + I L A I ARQ+FDQ+ D + IT Y + E+
Sbjct: 24 LIIIKYLSLTPLFIRRLLNASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRT 83
Query: 104 FQSMPVKN--IVSWNC--MIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLK 155
F SM N IV + + C ID + + NA+I+ + K
Sbjct: 84 FVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAK 143
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
L A +F+ + ++ I+Y ++ + + GEV AR L D M +++VSW MI+ Y
Sbjct: 144 INDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCY 203
Query: 216 VKNERFCEARELFYRMPD-------------------------------------YDKNV 238
+N + + +F RM D N+
Sbjct: 204 AQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNM 263
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
V TAM+ + K G +++ RL+F+ + +D V+++AMIAGYAQNG + EAL LF M
Sbjct: 264 IVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSA 323
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++P+D TLVSV +AC+ L + G + V G +NV V +A++ MYS+CG I+ +
Sbjct: 324 QIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKA 383
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F ++ + V+WN++I A +G E A+ +++M P+ ITF+ L++AC HA
Sbjct: 384 RQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHA 443
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V ++ F M + I P+ EH+ C+VD+ R+G+L A++ M E + +WG+
Sbjct: 444 GHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGT 503
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL+A I+LNVEL ELA KK+ EL+P NS YV+LSN+YA+AG W++ +VR LMK++ V
Sbjct: 504 LLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRV 563
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
K AYSW+E+ ++VH FL GD SHP D+++
Sbjct: 564 QKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVY 595
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 227/485 (46%), Gaps = 75/485 (15%)
Query: 8 HQTYLKRILF--PPILRILSTPDSCGNFTP-----HSSNCLIRLFSTQYVFVNNAKISAL 60
HQ ++ + F PPI + SC + + +IR VF NA I+
Sbjct: 88 HQNNVRIVCFTIPPIFK------SCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFY 141
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA 120
++ + +A +FD + KD I +N +I+ Y ++G + ++ LF M ++IVSWN MI+
Sbjct: 142 AKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMIS 201
Query: 121 GCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV-- 174
N + FQ M E N T ++S K G LE R+ + +N+
Sbjct: 202 CYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGS 261
Query: 175 --ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
I TAML+ ++K G VD R + D+M+ ++VV+W+ MI GY +N R EA ELF M
Sbjct: 262 NMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMK 321
Query: 233 DYD-------------------------------------KNVFVVTAMITGFCKVGMLE 255
NV+V +A++ + K G +
Sbjct: 322 SAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNII 381
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
AR +F+++ +D V++N+MI G A NG AE+A+ L++ M +++++P++ T V + TAC+
Sbjct: 382 KARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACT 441
Query: 316 -------ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHS 367
L+ R H N+ ++ ++ R G ++D+ E R
Sbjct: 442 HAGHVELGLEFFRSMRSDH------NISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVE 495
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI-TFLSLLSACGHAGKVNESMD 426
PN+V W T+++A H + E A + + L +PD ++ L + AG+ E++
Sbjct: 496 PNVVIWGTLLSASRIHLNVELAEL--AGKKLLELEPDNSGNYVILSNIYASAGRWQEALK 553
Query: 427 LFELM 431
+ +LM
Sbjct: 554 VRKLM 558
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 186/629 (29%), Positives = 325/629 (51%), Gaps = 85/629 (13%)
Query: 31 GNFTPHSSNCLI--RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAII 88
G P + +CL+ L +V N ++A +R+G++ AR+LFD M ++ T NA++
Sbjct: 24 GARVPGAVHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALL 83
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG----------------------CIDND 126
+ L + LF SMP ++ VS+N +IAG +D
Sbjct: 84 SALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGA 143
Query: 127 RIDDAFDYFQAMPERNTA------------------------TYNAMISGFLKHGRLEEA 162
R+ + M +A T++ ++ + K G + +A
Sbjct: 144 RVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDA 203
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
R+F++M +NV+ Y M+ G ++ V++AR + + M ++ ++WT M+TG +N
Sbjct: 204 KRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQS 263
Query: 223 EARELFYRMPD-------------------------------------YDKNVFVVTAMI 245
EA ++F RM YD N+FV +A++
Sbjct: 264 EALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALV 323
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K + A +F R+ K+ +S+ AMI GY QNG EEA+R+FS M ++P+D
Sbjct: 324 DMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDF 383
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
TL SV ++C+ L L EG Q H + + +G ++V +A++T+Y +CG I D+ F ++
Sbjct: 384 TLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEM 443
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+ VS+ +++ +AQ G ++ + F +M L G P+G+TF+ +LSAC +G V +
Sbjct: 444 PFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGC 503
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
F M + +GI+ +HYTC++D+ SR+G+L++A + + MP D W +LL+AC +
Sbjct: 504 SYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRL 563
Query: 486 NLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYS 545
++E+G+ AA+ + + DPQN A YV+L +++A+ G W +V +R M+++ V K+ S
Sbjct: 564 RGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCS 623
Query: 546 WIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
WI+ N+VH F D SHP I+ +L+
Sbjct: 624 WIKYKNRVHIFSADDQSHPFSGTIYEKLQ 652
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 308/555 (55%), Gaps = 17/555 (3%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++L ++ V VNN+ + S+ G ++ A+ LFD+ K+ ++WN +I G G++ E+
Sbjct: 161 VKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAF 220
Query: 102 NLFQSMPVKNIVSWN-----CMIAGCIDNDRIDDAFDYFQAMPERNTATY-----NAMIS 151
NLF+ M ++ + N ++ C++ ++ + R+ Y N ++
Sbjct: 221 NLFREMQMQEDIEVNEVTVLNILPACLEISQLR-SLKELHGYSIRHGFQYDELVANGFVA 279
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV-SW-- 208
+ K G L A R+F M + V S+ A++ G + G+ KA L M++ +V W
Sbjct: 280 AYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFT 339
Query: 209 ---TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
++ + ++K+ R+ + F + + F+ ++++ + G +ARLLF+ ++
Sbjct: 340 IGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGME 399
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
K VS+NAMI+GY+QNG+ E+AL LF ++ QP D +VSV ACS L G++
Sbjct: 400 EKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKE 459
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+H ++ +V V + I MY++ G I +S F + + +L SWN IIAA+ HG
Sbjct: 460 THCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGD 519
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E+++ F +M G PDG TF+ +L+ C HAG V E + F M +GI P EHY
Sbjct: 520 GEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYA 579
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C++D+L RAG+L+ A ++ MP + D+ VW SLL+ C +E+G++ A+K+ EL+P+
Sbjct: 580 CVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPK 639
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
N YV LSNLYA +G W DV RVR ++K+ G+ K SWIE+G KVH F+ GD P
Sbjct: 640 NVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQ 699
Query: 566 IDKIHLELKRASVQM 580
++ + ++ +M
Sbjct: 700 SKEMSMTWRKLEKKM 714
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 231/475 (48%), Gaps = 29/475 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
VFV NA I+ + G + AA ++F M +++++WN+II+G+ +NGF ++ ++ M
Sbjct: 66 VFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMA 125
Query: 109 -----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRL 159
+ +I + ++ C + + + N+++ + K G L
Sbjct: 126 GEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYL 185
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK-----NVVSWTVMITG 214
EA LF++ R+N +S+ M+ G KG + +A L M + N V+ ++
Sbjct: 186 TEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPA 245
Query: 215 YVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
++ + +EL + + + V + + K GML A +F ++ K S+
Sbjct: 246 CLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSW 305
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NA+I G AQNG +AL L+ M + PD T+ S+ A + L+ L G++ H V+R
Sbjct: 306 NALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLR 365
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+G E + + +++++Y CG + L F + + VSWN +I+ ++Q+G E ALI
Sbjct: 366 HGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALIL 425
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHA-----GKVNESMDLFELMVKVYGIIPSSEHYTCL 447
F ++ +GF P I +S+L AC GK L L+++ + S+
Sbjct: 426 FRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACST------ 479
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
+D+ +++G ++++ + G+ D W +++AA ++ + E ++MR++
Sbjct: 480 IDMYAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGDGEESIELFERMRKV 533
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 129/253 (50%), Gaps = 5/253 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+VFV A+I + K G ++ A +F + ++ VS+N++I+G+++NG +++ + M+
Sbjct: 65 DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMM 124
Query: 297 KMD--MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ + PD ATLV+V C+ + G + H L ++ G +V V N+++ MYS+CG
Sbjct: 125 AGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGY 184
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLS 413
+ ++++ F + + N VSWNT+I G+ +A F +M + + + +T L++L
Sbjct: 185 LTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILP 244
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC ++ +L ++ +G V ++ G L A ++ M +
Sbjct: 245 ACLEISQLRSLKELHGYSIR-HGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKT-V 302
Query: 474 GVWGSLLAACVIN 486
W +L+ C N
Sbjct: 303 NSWNALIGGCAQN 315
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 281 QNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
+N + +A+ +F +I + D+ T V AC+ G H +VI+ G +V
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM--G 397
V NA+I MY + G + + F + NLVSWN+II+ F+++G + +M G
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
G PD T +++L C V + + L VK+ G+ LVD+ S+ G L
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKL-GLSEDVRVNNSLVDMYSKCGYL 185
Query: 458 EKA 460
+A
Sbjct: 186 TEA 188
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 301/564 (53%), Gaps = 51/564 (9%)
Query: 57 ISALSRAGKISAARQLFDQM----TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
++A + G ++ +QL + + D I +++ Y + G + E+ +F+S N+
Sbjct: 251 LAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNV 310
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGR--LEEATRLF 166
V WN M+ + +FD F M N TY ++ G L E L
Sbjct: 311 VLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLL 370
Query: 167 EQMPRRNVISYTA--MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC-E 223
Y + ++D + K G +DKAR + + + K+VVSWT MI GYV++E FC E
Sbjct: 371 SIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHE-FCKE 429
Query: 224 ARELFYRM------PD-------------------------------YDKNVFVVTAMIT 246
A E F M PD Y +V + A++
Sbjct: 430 ALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVN 489
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ + G + A LFE I+ KD +++N M++G+AQ+G+ EEAL +F M + ++ + T
Sbjct: 490 LYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFT 549
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
VS +A + L + +G+Q H VI+ G + V NA+I++Y +CG I D+++ F ++
Sbjct: 550 FVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMS 609
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
N VSWNTII + +QHG +AL F QM G P+ +TF+ +L+AC H G V E +
Sbjct: 610 ERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLG 669
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
F+ M +GI P +HY C+VDIL RAGQL++A + + MP A+ VW +LL+AC ++
Sbjct: 670 YFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVH 729
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
N+E+GELAAK + EL+P +SA YV+LSN YA G W VR +MK++GV K+ SW
Sbjct: 730 KNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSW 789
Query: 547 IEIGNKVHYFLGGDMSHPCIDKIH 570
IE+ N VH F GD HP +I+
Sbjct: 790 IEVKNVVHAFFVGDRLHPLAHQIY 813
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 208/449 (46%), Gaps = 26/449 (5%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
N I ++ G + AR++F+Q++ +D ++W A+++GY +NG +E+ L+ M +
Sbjct: 80 GNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGV 139
Query: 113 VSW---------NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEAT 163
V C A + R+ A Y Q T NA+I+ +L+ G L A
Sbjct: 140 VPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCS-ETVVGNALIALYLRFGSLSLAE 198
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNE 219
R+F +MP + +++ ++ + G + A + + M + V+ ++
Sbjct: 199 RVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIG 258
Query: 220 RFCEARELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ ++L + PDY + +++ + K G++ A +F+ + V +N
Sbjct: 259 DLNKGKQLHSYLLKAGMSPDY----IIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWN 314
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
M+ Y Q ++ LF M+ ++P++ T + C+ +N G Q H+L I+
Sbjct: 315 LMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKT 374
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GFE+++ V +I MYS+ G + + + + ++VSW ++IA + QH ++AL F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETF 434
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
M L G PD I S +SAC + + + V V G + LV++ +R
Sbjct: 435 KDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHS-RVYVSGYSADVSIWNALVNLYAR 493
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G+ ++A+ + + + + D W +++
Sbjct: 494 CGRSKEAFSLFEAIEHK-DKITWNGMVSG 521
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 172/345 (49%), Gaps = 10/345 (2%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +I + K G ++ A R+FEQ+ R+ +S+ AML G+ + G ++A L M VV
Sbjct: 81 NLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 207 S----WTVMITGYVKNERFCEAREL---FYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
+ +++ K F + R + Y+ + V V A+I + + G L A
Sbjct: 141 PTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETV-VGNALIALYLRFGSLSLAER 199
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F + D V+FN +I+ +AQ G E AL +F M PD T+ S+ AC+++
Sbjct: 200 VFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGD 259
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
LN+G+Q H +++ G + + +++ +Y +CG I+++ F+ N+V WN ++ A
Sbjct: 260 LNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVA 319
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ Q K+ F QM G P+ T+ LL C +AG++N + L +K G
Sbjct: 320 YGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKT-GFES 378
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
L+D+ S+ G L+KA +I + + + D W S++A V
Sbjct: 379 DMYVSGVLIDMYSKYGWLDKARRILEVLEAK-DVVSWTSMIAGYV 422
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+ T V NA IS + G I A+ F +M+ ++ ++WN IIT Q+G+ E+
Sbjct: 573 VIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEA 632
Query: 101 KNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN-----TATYNAMIS 151
+LF M + N V++ ++A C +++ YF++M + Y ++
Sbjct: 633 LDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVD 692
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ G+L+ A + E+MP
Sbjct: 693 ILGRAGQLDRARKFVEEMP 711
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS---- 326
S N + G+ + E+ L LF+ ++ L SV AC+ L E R S
Sbjct: 8 SLNKSLTGFLAHEDPEKLLSLFAAKVR-----QCRGLGSVDFACA----LRECRGSVKHW 58
Query: 327 ------HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
H I G + N +I +Y++ G + + F Q+ + + VSW +++ +
Sbjct: 59 PLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGY 118
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A++G E+A+ + QM +G P S+LSAC A + E L V G
Sbjct: 119 ARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAA-LFEQGRLVHAQVYKQGSCSE 177
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPF 469
+ L+ + R G L A ++ MP+
Sbjct: 178 TVVGNALIALYLRFGSLSLAERVFSEMPY 206
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 199/651 (30%), Positives = 327/651 (50%), Gaps = 108/651 (16%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V+N ISA + G + AR+LFD+M + I+W A+I+G+ + G ++ES F+ P
Sbjct: 87 LVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPF 146
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYF------QAMP------------------------ 139
+N+VSW I+G + N +A F + P
Sbjct: 147 QNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSV 206
Query: 140 ---------ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
E + A N++I+ L+ G + A +F++M ++V+S+TA+LD +++ E+
Sbjct: 207 LGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDEL 266
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----------- 233
+AR + D M +N VSW+ MI Y ++ E+ LF RM P+
Sbjct: 267 GEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSAL 326
Query: 234 --------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
++K+VFV +++I +CK G ++ R LF+ I K+ VS+N
Sbjct: 327 ASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWN 386
Query: 274 AMIAGYAQNGVAEEA-------------------------------LRLFSGMIKMDMQP 302
AM+ GY+ NG EEA +F+ MI + P
Sbjct: 387 AMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIP 446
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
+ +T S+ AC++ L++G+ H +++ G + + V A+ MY++ G I S+ F
Sbjct: 447 NKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVF 506
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKV 421
++ N VSW +I A+ G E++L F +M + P+ + FL++L AC H+G V
Sbjct: 507 NRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLV 566
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
++ + F M VYG+ P H+TC+VD+LSRAG+L +A + MPF+ +T W +LL+
Sbjct: 567 DKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLS 626
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
C N EL E A K+ E+ +N A YV+LSN+YA+AG WRDV +VR LMK +G+ K
Sbjct: 627 GCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKS 686
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATS 592
SW+EI ++VH F D +H +I+ L+ +MK + + +S
Sbjct: 687 GGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEMKCFKEVLAFCSS 737
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 213/428 (49%), Gaps = 73/428 (17%)
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
++V NCMI+ + +D+A F MP+ N ++ A+ISGF+K+GR+ E+ FE+ P
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNP 145
Query: 171 RRNVISYTAMLDGFMKKGEVDKARAL----------SDYMSFKNVVS------------- 207
+NV+S+TA + G+++ G +A L + ++F +VV
Sbjct: 146 FQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMS 205
Query: 208 --WTVMITGY-----VKNE------RFCE---ARELFYRMPDYDKNVFVVTAMITGFCKV 251
++ TGY V N R E ARE+F RM +K+V TA++ + ++
Sbjct: 206 VLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRME--EKDVVSWTAILDLYVEM 263
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
L AR +F+ + ++ VS++AMIA Y Q+G EE+LRLF MI+ +P+ + S+
Sbjct: 264 DELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSIL 323
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
+A ++++ L G H V + GFE +V V +++I MY +CG D F I N+V
Sbjct: 324 SALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMV 383
Query: 372 SWNTIIAAFAQHGHYEKALIF-------------------------------FSQMGLNG 400
SWN ++ ++ +GH E+A F++M L G
Sbjct: 384 SWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLG 443
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
P+ TF SLL AC +++ +L +VK+ GI + T L D+ +++G +E +
Sbjct: 444 EIPNKSTFSSLLCACASTASLDKGKNLHGKIVKL-GIQCDTYVGTALTDMYAKSGDIESS 502
Query: 461 WQITQGMP 468
++ MP
Sbjct: 503 KKVFNRMP 510
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 163/347 (46%), Gaps = 38/347 (10%)
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
I M + K E D+ D+ F ++V MI+ V+ EAR+LF MP
Sbjct: 60 IKLLIMYLNYRKSAEADQIS--KDFDGF-DLVVHNCMISANVQRGNLDEARKLFDEMPQ- 115
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
N TA+I+GF K G + + FER ++ VS+ A I+GY QNG + EA++LF
Sbjct: 116 -TNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIK 174
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG- 353
+++ +++P+ T SV AC+ L G L+++ G+E +++V N++IT+ R G
Sbjct: 175 LLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGE 234
Query: 354 --------------------GILD-----SELA-----FRQIHSPNLVSWNTIIAAFAQH 383
ILD EL F ++ N VSW+ +IA + Q
Sbjct: 235 IHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQS 294
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G+ E++L F +M GF P+ F S+LSA + M++ + K+ G
Sbjct: 295 GYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKI-GFEKDVFV 353
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
+ L+D+ + G+ + + + E + W +++ +N ++E
Sbjct: 354 SSSLIDMYCKCGETKDGRFLFDTI-LEKNMVSWNAMVGGYSLNGHME 399
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 283/497 (56%), Gaps = 12/497 (2%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N+++ Y + G + ++ +F+ M V+++ SWN M++ R++ A F+ M ER+
Sbjct: 386 NSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIV 445
Query: 145 TYNAMISGFLKHGRLEEATRLFEQM-----PRRNVISYTAMLDG-----FMKKGEVDKAR 194
++N +I+G+ ++G A + F +M + + T++L +K G+ +
Sbjct: 446 SWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSY 505
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
L M + + +I+ Y K+ AR + + D NV TA++ G+ K+G
Sbjct: 506 ILRTGMPCSSQI-MNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDT 564
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ AR +F+ + +D +++ AMI GY QNG +EA+ LF MI + +P+ TL +V +AC
Sbjct: 565 KQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSAC 624
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSW 373
++L L+ G+Q H IR+ E +VSV NA+IT+Y+R G + + F QI ++W
Sbjct: 625 ASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITW 684
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
++I A AQHG E+A++ F +M G PD IT++ +LSAC HAG V++ +E M
Sbjct: 685 TSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQN 744
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+GI+P HY C+VD+ +RAG L +A + Q MP DT VWGSLLAAC + N +L E
Sbjct: 745 EHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAE 804
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
LAA K+ +DP NS Y L+N+Y+A G W D R+ L K++GV K+ +SW + KV
Sbjct: 805 LAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKV 864
Query: 554 HYFLGGDMSHPCIDKIH 570
H F D+ HP D I+
Sbjct: 865 HVFGADDVLHPQRDSIY 881
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 143/576 (24%), Positives = 259/576 (44%), Gaps = 143/576 (24%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L + V V N+ + + G AR +F++M + V +WN +++ Y G ++ +
Sbjct: 373 VVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELA 432
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTAT-------- 145
++F++M ++IVSWN +IAG N A +F M P+ T T
Sbjct: 433 VSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACAN 492
Query: 146 -------------------------YNAMISGFLKHGRLEEATRLFEQ--MPRRNVISYT 178
NA+IS + K G +E A R+ +Q + NVIS+T
Sbjct: 493 LRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFT 552
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----P-- 232
A+L+G++K G+ +AR + D M+ ++V++WT MI GY +N + EA ELF M P
Sbjct: 553 ALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEP 612
Query: 233 ------------------DYDK-------------NVFVVTAMITGFCKVGMLENARLLF 261
DY K +V V A+IT + + G + AR +F
Sbjct: 613 NSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVF 672
Query: 262 ERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
++I K+ +++ +MI AQ+G+ E+A+ LF M+++ ++PD T V V +AC+ +
Sbjct: 673 DQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFV 732
Query: 321 NEGRQSH-VLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIA 378
++G++ + + +G +S ++ +++R G + ++ E R +P+ V W
Sbjct: 733 DKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWG---- 788
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGI 437
SLL+AC +V ++ DL EL K+ I
Sbjct: 789 -------------------------------SLLAAC----RVRKNADLAELAAGKLLSI 813
Query: 438 IP-SSEHYTCLVDILSRAGQLEKA---WQITQGMPFEADTGV-WGSLLAACVINLNVELG 492
P +S Y+ L ++ S G+ A W++ + + +TG W ++ ++
Sbjct: 814 DPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSW--------THVRGKVH 865
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTR 528
A + L PQ ++Y AA MW ++ +
Sbjct: 866 VFGADDV--LHPQRDSIY------RKAAEMWEEIKK 893
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 187/423 (44%), Gaps = 78/423 (18%)
Query: 135 FQAMP--ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV-D 191
F +P RN T+N+++S + K GRL +A +F +MP R+ +S+T M+ G + G D
Sbjct: 271 FDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWD 330
Query: 192 KARALSDYMS---------FKNVVSWTVMITG---------------------------- 214
+ D +S NV+S +
Sbjct: 331 AVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLY 390
Query: 215 -YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
Y K AR +F RM ++V M++ + G +E A +FE + + VS+N
Sbjct: 391 MYGKCGDAETARAVFERM--QVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWN 448
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
+IAGY QNG+ AL+ FS M+ M+PD T+ SV +AC+ L++L G+Q H ++R
Sbjct: 449 TIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILR 508
Query: 333 NGFEANVSVCNAVITMYSRCGG------ILDSELA------------------------- 361
G + + NA+I+ Y++ G I+D +
Sbjct: 509 TGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAR 568
Query: 362 --FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F +++ ++++W +I + Q+G ++A+ F M L G +P+ T ++LSAC
Sbjct: 569 EIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLA 628
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
++ + ++ S ++ + +R+G + A ++ + + +T W S+
Sbjct: 629 YLDYGKQIHCKAIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSM 687
Query: 480 LAA 482
+ A
Sbjct: 688 IVA 690
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 33/275 (12%)
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
F EAR LF +P +N F ++++ + K G L +A ++F + +D VS+ MI G
Sbjct: 264 FREARCLFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLN 323
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
++G +A++ F M+ P TL +V ++C+A++ GR+ H V++ G + V
Sbjct: 324 RSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVP 383
Query: 341 VCNAVITMYSRCGGILDSELAF-----RQIHSPN-------------------------- 369
V N+V+ MY +CG + F R + S N
Sbjct: 384 VANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERS 443
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
+VSWNTIIA + Q+G AL FFS+M + +PD T S+LSAC + + +
Sbjct: 444 IVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMH 503
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+++ G+ SS+ L+ +++G +E A +I
Sbjct: 504 SYILRT-GMPCSSQIMNALISTYAKSGSVETARRI 537
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/563 (31%), Positives = 311/563 (55%), Gaps = 20/563 (3%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN-- 111
N IS S+ GK+ AR++FD M ++ +WN++I+ Y GFL ++ +LF + +
Sbjct: 273 NPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMK 332
Query: 112 --IVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMIS-----GFLKHGRLE 160
IV+WNC+++G + ++ + Q M + N+++ +++ GFL G+ E
Sbjct: 333 PDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGK-E 391
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ +V T+++D ++K + A+A+ D M +N+ +W +++GY
Sbjct: 392 THGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGM 451
Query: 221 FCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQP----KDCVSFNA 274
F +A L +M +VT MI+G+ G + A + + + + VS+ A
Sbjct: 452 FEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTA 511
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+I+G +Q G ++L+ F+ M + + P+ A++ + AC++L LL +G++ H L IRNG
Sbjct: 512 LISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNG 571
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F +V V A+I MYS+ + ++ FR+I + L SWN +I FA G ++A+ F+
Sbjct: 572 FIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFN 631
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M G PD ITF +LLSAC ++G + E F+ M+ Y I+P EHY C+VD+L RA
Sbjct: 632 EMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRA 691
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G L++AW + MP + D +WG+LL +C I+ N++ E AAK + +L+P NSA Y+++
Sbjct: 692 GYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMM 751
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
NLY+ W D+ +R LM GV + +SWI+I +VH F + HP KI+ EL
Sbjct: 752 NLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELY 811
Query: 575 RASVQMKSVDDFVEIATSWSSFD 597
+ +MK + ++ + + D
Sbjct: 812 QLVSEMKKLGYVPDVNCVYQNMD 834
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 207/480 (43%), Gaps = 95/480 (19%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
CLI+ V++ A ++ R + A Q+F +M + + WN I Q+ LQ+
Sbjct: 158 CLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQK 217
Query: 100 SKNLFQSMPVKNI---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI 150
LF+ M + V C G ++ + + F+ + + + N +I
Sbjct: 218 GVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGY-VFRFGLDSDVSLCNPLI 276
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL------SDYMSFKN 204
S + K+G+LE A R+F+ M RN S+ +M+ + G ++ A +L SD +
Sbjct: 277 SMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKP--D 334
Query: 205 VVSWTVMITGYVKNERFCEARELFYRM------PD------------------------- 233
+V+W +++G+ + E + RM P+
Sbjct: 335 IVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHG 394
Query: 234 ------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
+D +V+V T++I + K L +A+ +F+ ++ ++ ++N++++GY+ G+ E+
Sbjct: 395 YVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFED 454
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
ALRL + M K ++PD LV NG +I+
Sbjct: 455 ALRLLNQMEKEGIKPD-------------------------LVTWNG----------MIS 479
Query: 348 MYSRCGGILDSELAFRQIHS----PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
Y+ G ++ Q S PN+VSW +I+ +Q G+ +L FF+QM G P
Sbjct: 480 GYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMP 539
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ + LL AC + + ++ L ++ G I T L+D+ S++ L+ A ++
Sbjct: 540 NSASITCLLRACASLSLLQKGKEIHCLSIR-NGFIEDVFVATALIDMYSKSSSLKNAHKV 598
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 150/309 (48%), Gaps = 9/309 (2%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+D +V++ A++ + + LE A +F + + + +N I Q+ ++ + LF
Sbjct: 164 FDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFR 223
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M ++ + AT+V V AC + LN +Q H V R G +++VS+CN +I+MYS+ G
Sbjct: 224 KMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNG 283
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ + F + + N SWN++I+++A G A F ++ + PD +T+ LLS
Sbjct: 284 KLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLS 343
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM----PF 469
G E +++ + M + G P+S T ++ +S G L + T G F
Sbjct: 344 GHFLHGYKEEVLNILQRM-QGEGFKPNSSSMTSVLQAISELGFLNMG-KETHGYVLRNGF 401
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ D V SL+ V N ++ + M+ +N + L + Y+ GM+ D R+
Sbjct: 402 DCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKN---RNIFAWNSLVSGYSFKGMFEDALRL 458
Query: 530 RLLMKEQGV 538
M+++G+
Sbjct: 459 LNQMEKEGI 467
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 43/287 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V + I + +++A+ +FD M +++ WN++++GY G +++ L M
Sbjct: 405 VYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEK 464
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ I + + T+N MISG+ G +EA + Q
Sbjct: 465 EGI---------------------------KPDLVTWNGMISGYAMWGCGKEALAVLHQT 497
Query: 170 PR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
NV+S+TA++ G + G + M + V+ + IT + R C +
Sbjct: 498 KSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLL---RACASL 554
Query: 226 ELFYRMPD---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
L + + + ++VFV TA+I + K L+NA +F RIQ K S+N MI
Sbjct: 555 SLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMI 614
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
G+A G+ +EA+ +F+ M K+ + PD T ++ +AC L+ EG
Sbjct: 615 MGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG 661
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 108/240 (45%), Gaps = 3/240 (1%)
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN-GVAEEALRLFSGMIKMDMQP 302
+I+ + G +A ++F P++ + +N+ + + + G L +F + +
Sbjct: 72 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 131
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D C+ + + G + H +I+ GF+ +V + A++ Y RC G+ + F
Sbjct: 132 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 191
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
++ +P + WN I Q +K + F +M + + T + +L ACG G +N
Sbjct: 192 HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALN 251
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + + + +G+ L+ + S+ G+LE A ++ M +T W S++++
Sbjct: 252 AAKQIHGYVFR-FGLDSDVSLCNPLISMYSKNGKLELARRVFDSME-NRNTSSWNSMISS 309
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 303/548 (55%), Gaps = 47/548 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
+V N +++ Y + L+E+ LF MP ++V+WN MI+GC+ N +DDA F M
Sbjct: 282 EVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQ 341
Query: 140 ----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVD 191
+ ++ T +++ + ++ + + R +V +A++D + K +V
Sbjct: 342 KSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVR 401
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR-----------------MPD- 233
A+ + D +VV + MI+GYV N R EA +R +P
Sbjct: 402 MAQNVFDATKSIDVVIGSTMISGYVLN-RMSEAAVKMFRYLLALGIKPNAVMVASTLPAC 460
Query: 234 --------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
Y+ +V +A++ + K G L+ + +F ++ KD V++N
Sbjct: 461 ASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWN 520
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+MI+ +AQNG EEAL LF MI ++ ++ T+ S+ +AC+ L + G++ H ++I+
Sbjct: 521 SMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKG 580
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
A++ +A+I MY +CG + + F + N VSWN+II+A+ HG ++++
Sbjct: 581 PIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLL 640
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
M GF D +TFL+L+SAC HAG+V E + LF M + Y I P EH +C+VD+ SR
Sbjct: 641 CCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSR 700
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
AG+L+KA Q MPF+ D G+WG+LL AC ++ NVEL E+A++++ +LDP N YV++
Sbjct: 701 AGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLM 760
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SN+ A AG W V+++R LMK++ V K YSW+++ N H F+ D +HP ++I++ L
Sbjct: 761 SNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSL 820
Query: 574 KRASVQMK 581
K +++K
Sbjct: 821 KSLIIELK 828
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 237/448 (52%), Gaps = 18/448 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V +A I + AG + AR++FD M +D + WN ++ GY + G + + LF+ M
Sbjct: 182 MYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRA 241
Query: 110 K----NIVSWNCMIAGC-IDNDRIDDAFDYFQAMP---ERNTATYNAMISGFLKHGRLEE 161
N + C ++ C + D + + A+ E A N ++S + K LEE
Sbjct: 242 SGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEE 301
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A RLF MPR +++++ M+ G ++ G VD A L M + V+ ++ +
Sbjct: 302 AWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTE 361
Query: 218 NERFCEARELF-YRMPDYDK-NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
F + +E+ Y + + +VF+V+A++ + K + A+ +F+ + D V + M
Sbjct: 362 LNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTM 421
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+GY N ++E A+++F ++ + ++P+ + S AC+++ + G++ H V++N +
Sbjct: 422 ISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAY 481
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E V +A++ MYS+CG + S F ++ + + V+WN++I++FAQ+G E+AL F Q
Sbjct: 482 EGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQ 541
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDILSRA 454
M + G + +T S+LSAC + ++ +++K G I + + L+D+ +
Sbjct: 542 MIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIK--GPIRADLFAESALIDMYGKC 599
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAA 482
G LE A ++ + MP E + W S+++A
Sbjct: 600 GNLELALRVFEHMP-EKNEVSWNSIISA 626
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 167/355 (47%), Gaps = 20/355 (5%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+R+ +A+I + G L+ A +F+ M R+ + + M+DG++K G+V A L
Sbjct: 179 DRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRV 238
Query: 200 MSFK----NVVSWTVMITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGM 253
M N + ++ +L Y + V V +++ + K
Sbjct: 239 MRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQC 298
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
LE A LF + D V++N MI+G QNG+ ++ALRLF M K +QPD TL S+ A
Sbjct: 299 LEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPA 358
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
+ L +G++ H ++RN +V + +A++ +Y +C + ++ F S ++V
Sbjct: 359 LTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIG 418
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+T+I+ + + E A+ F + G P+ + S L AC SM + +
Sbjct: 419 STMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACA-------SMAAMRIGQE 471
Query: 434 VYGIIPSSEH------YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++G + + + + L+D+ S+ G+L+ + + M + D W S++++
Sbjct: 472 LHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAK-DEVTWNSMISS 525
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 4/219 (1%)
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMI--KMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ +N +I G+ G A+ + M +PD TL V +C+AL L+ GR H
Sbjct: 111 LPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVH 170
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
G + ++ V +A+I MY+ G + + F + + V WN ++ + + G
Sbjct: 171 RTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVA 230
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
A+ F M +G DP+ T LS C + + L L VK YG+ P L
Sbjct: 231 SAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVK-YGLEPEVAVANTL 289
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
V + ++ LE+AW++ MP + D W +++ CV N
Sbjct: 290 VSMYAKCQCLEEAWRLFGLMPRD-DLVTWNGMISGCVQN 327
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 182/473 (38%), Positives = 266/473 (56%), Gaps = 23/473 (4%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA 148
TG W + FLQ NC+I + + A F MP+R++ +YN+
Sbjct: 154 TGLWSDLFLQ-----------------NCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNS 196
Query: 149 MISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNV 205
MI G++K G E A LF+ MP +N+IS+ +M+ G+ + + VD A L M K++
Sbjct: 197 MIDGYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDL 256
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+SW MI GYVK+ R +A+ LF MP D V + MI G+ K+G + A+ LF+++
Sbjct: 257 ISWNSMIDGYVKHGRIEDAKYLFDVMPRRD--VVTWSTMIDGYAKLGFVHQAKTLFDQMP 314
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGR 324
+D VS+N+MIAGY QN EAL +FS M K + PD+ TLV V +A + L L++
Sbjct: 315 HRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAM 374
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H+ ++ F + A+I MYS+CG I + L F+ I + ++ WN +I A HG
Sbjct: 375 DMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHG 434
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
E A Q+ PD ITF+ LL+AC H+G V E + FELM + + I P +HY
Sbjct: 435 LGESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 494
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+VDILSR+G +E A + + MP E + +W + LAAC + E GEL AK +
Sbjct: 495 GCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLAACNHHKEFETGELVAKHLIWEAG 554
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSNLYA+ G W+DV R+R +MKE+ + K SWIE+ +VH F
Sbjct: 555 YNPSSYVLLSNLYASFGKWKDVRRIRTIMKERKIEKVPGCSWIELDGRVHEFF 607
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 215/412 (52%), Gaps = 50/412 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + ARQ+FD+M +D +++N++I GY + G + ++ LF MP
Sbjct: 160 LFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLMPE 219
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+KN++SWN MI+G +D +D A F MP+++ ++N+MI G++KHGR+E+A LF
Sbjct: 220 EMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLISWNSMIDGYVKHGRIEDAKYLF 279
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ MPRR+V++++ M+DG+ K G V +A+ L D M ++VVS+ MI GYV+N EA E
Sbjct: 280 DVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALE 339
Query: 227 LFYRM-------PD--------------------YDKNVFVV-----------TAMITGF 248
+F M PD D ++++V A+I +
Sbjct: 340 IFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMY 399
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G +++A L+F+ I+ K +NAMI G A +G+ E A + + + ++PDD T V
Sbjct: 400 SKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFV 459
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
+ ACS L+ EG L+ R + E + ++ + SR G I ELA I
Sbjct: 460 GLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSI---ELAKNLIEE 516
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSA 414
PN V W T +AA H +E + + G++P LS L A
Sbjct: 517 MPIEPNDVIWRTFLAACNHHKEFETGELVAKHLIWEAGYNPSSYVLLSNLYA 568
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 177/434 (40%), Gaps = 77/434 (17%)
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC---KVGMLENARLLFE 262
+S T+ + G KN + KN + T ++ F + +E AR +F
Sbjct: 14 ISPTIKLLGSCKNSEDVNKIHARLVTNGFIKNPNLTTRIVLAFAASRRPYXVEFARFVFH 73
Query: 263 R-----IQP-----KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
P +D +NA+I ++ AL LF M++ + D +L V
Sbjct: 74 EYXIRSFSPGGGDXEDXYLWNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLK 133
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
ACS L L+ EG Q H + + G +++ + N +I +Y +CG + + F ++ + VS
Sbjct: 134 ACSRLGLVKEGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVS 193
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMG------------LNGF------------------D 402
+N++I + + G E A F M ++G+ D
Sbjct: 194 YNSMIDGYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPD 253
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
D I++ S++ G++ ++ LF++M + + ++ ++D ++ G + +A
Sbjct: 254 KDLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDVVT-----WSTMIDGYAKLGFVHQAKT 308
Query: 463 ITQGMPFEADTGVWGSLLAACVIN-LNVELGELAAKKMRE--LDPQNSAVYVMLSNLYAA 519
+ MP D + S++A V N N+E E+ + +E L P + + ++LS + A
Sbjct: 309 LFDQMPHR-DVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAI-AQ 366
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG-------DMSHPCIDKIHLE 572
G + L + E+ +FLGG DM C H
Sbjct: 367 LGRLSKAMDMHLYIVEK-----------------QFFLGGKLGVALIDMYSKCGSIQHAM 409
Query: 573 LKRASVQMKSVDDF 586
L ++ KS+D +
Sbjct: 410 LVFKGIENKSIDHW 423
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 197/643 (30%), Positives = 317/643 (49%), Gaps = 115/643 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV N + ++ + +++LFD++ ++V++WNA+ + Y Q F E+ LF M +
Sbjct: 192 VFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVL 251
Query: 110 KNI----VSWNCMIAGCI---DNDR--------------------------------IDD 130
I S + M+ C D+ R + D
Sbjct: 252 SGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLAD 311
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAML----- 181
A F+ + + + ++NA+I+G + H E+A L QM R N+ + ++ L
Sbjct: 312 AISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAG 371
Query: 182 ---------------------DGFMKKGEVD---------KARALSDYMSFKNVVSWTVM 211
D F+ G VD AR + + K++++W +
Sbjct: 372 MGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAI 431
Query: 212 ITGYVKNERFCEARELFYRM-------------------------------------PDY 234
I+GY + EA LF M +
Sbjct: 432 ISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGF 491
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+++VV ++I + K +E+A +FE D VSF +MI YAQ G EEAL+LF
Sbjct: 492 HSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLE 551
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M M+++PD S+ AC+ L +G+Q HV +++ GF ++ N+++ MY++CG
Sbjct: 552 MQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGS 611
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I D+ AF ++ +VSW+ +I AQHGH +AL F+QM G P+ IT +S+L A
Sbjct: 612 IDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGA 671
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C HAG V E+ FE M +++G P EHY C++D+L RAG++ +A ++ MPFEA+
Sbjct: 672 CNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANAS 731
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VWG+LL A I+ +VELG AA+ + L+P+ S +V+L+N+YA+AG W +V VR LM+
Sbjct: 732 VWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMR 791
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
+ V K+ SWIE+ +KV+ FL GD SH +I+ +L S
Sbjct: 792 DSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELS 834
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 138/547 (25%), Positives = 242/547 (44%), Gaps = 70/547 (12%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK- 110
+ N I+ S+ AR+L D+ + D+++W+A+I+GY QNG + F M +
Sbjct: 93 IRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLG 152
Query: 111 ---NIVSWNCMIAGC--IDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEAT 163
N +++ ++ C + + RI + E + N ++ + K ++
Sbjct: 153 VKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSK 212
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMI---TGYV 216
RLF+++P RNV+S+ A+ +++ +A L M N S + M+ TG
Sbjct: 213 RLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLR 272
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
+ R ++ YD + F A++ + KVG L +A +FE+I+ D VS+NA+I
Sbjct: 273 DSSRGKIIHGYLIKL-GYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVI 331
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
AG + E+AL L M + + P+ TL S AC+ + L GRQ H +++ E
Sbjct: 332 AGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDME 391
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+++ V ++ MYS+C + D+ +AF + +L++WN II+ ++Q+ +AL F +M
Sbjct: 392 SDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEM 451
Query: 397 -----GLN------------------------------GFDPDGITFLSLLSACGHAGKV 421
G N GF D SL+ + G V
Sbjct: 452 HKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHV 511
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI---TQGMPFEADTGVWGS 478
++ +FE I +T ++ ++ GQ E+A ++ Q M + D V S
Sbjct: 512 EDAERIFEECT-----IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSS 566
Query: 479 LLAACVINLNVELGE------LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
LL AC E G+ L + ++ NS V N+YA G D R
Sbjct: 567 LLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLV-----NMYAKCGSIDDAGRAFSE 621
Query: 533 MKEQGVT 539
+ E+G+
Sbjct: 622 LTERGIV 628
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
K + P + + + C + L G Q H + ++G + S+ N +I +YS+C
Sbjct: 49 KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFG 108
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ + P+LVSW+ +I+ +AQ+G AL+ F +M L G + TF S+L AC
Sbjct: 109 YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKAC 167
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 308/556 (55%), Gaps = 30/556 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + A + + +S A++LF+ + ++ ++NAII GY ++ E+ +F+ +
Sbjct: 310 VVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQK 369
Query: 110 KNI----VSWNCMIAGCI----DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ VS + C D + + +++ + N NA++ + K G L E
Sbjct: 370 SGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVE 429
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM--------------SFKNVVS 207
A +FE+M R+ +S+ A++ + G +K +L +M K
Sbjct: 430 ACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAG 489
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
W + G + R ++R + FV A+I + K GM+E A L +R+ +
Sbjct: 490 WQALNCGMEIHNRIIKSR--------LGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQ 541
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
VS+NA+I+G++ +EEA + FS M++M + PD+ T ++ C+ L + G+Q H
Sbjct: 542 TVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIH 601
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+I+ +++ + + ++ MYS+CG + D +L F + + + V+WN ++ +AQHG E
Sbjct: 602 AQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGE 661
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+AL F M L P+ TFL++L ACGH G V + + F M+ YG+ P EHY+C+
Sbjct: 662 EALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCV 721
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
VDI+ R+GQ+ KA ++ +GMPFEAD +W +LL+ C I+ NVE+ E AA + +L+P++S
Sbjct: 722 VDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDS 781
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
A YV+LSN+YA AGMW +VT++R +M+ G+ K+ SWIEI ++VH FL GD +HP
Sbjct: 782 AAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSK 841
Query: 568 KIHLELKRASVQMKSV 583
+I+ L + +MK V
Sbjct: 842 EIYENLDVLTDEMKWV 857
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 152/550 (27%), Positives = 255/550 (46%), Gaps = 52/550 (9%)
Query: 5 SYFHQTYLKRILFPPILRILSTPDS-CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRA 63
S + T K+ F I + S + C H+ L T VFV N I +
Sbjct: 33 SSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPT--VFVTNCLIQMYIKC 90
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
+ A ++FD M +D ++WNA++ GY G + ++ LF +MP +++VSWN +I+G +
Sbjct: 91 SDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYL 150
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLK-------HGRLEEATRLFEQMPRR-NVI 175
N D F M T + LK HG + L +M +V+
Sbjct: 151 HNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVV 210
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM---- 231
+ +A+LD + K ++D + M KN VSW+ +I G V+N+ ELF M
Sbjct: 211 TGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAG 270
Query: 232 ---------------------------------PDYDKNVFVVTAMITGFCKVGMLENAR 258
D+ +V + TA + + K L +A+
Sbjct: 271 VGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQ 330
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
LF + + S+NA+I GYA++ EAL +F + K + D+ +L F AC+ ++
Sbjct: 331 KLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIK 390
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
EG Q H L +++ ++N+ V NA++ MY +CG ++++ L F ++ S + VSWN IIA
Sbjct: 391 GDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIA 450
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
A Q+G+ EK L F M +G +PD T+ S+L AC +N M++ ++K +
Sbjct: 451 AHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGL 510
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
S L+D+ S+ G +EKA ++ + E W ++++ + E + K
Sbjct: 511 DSFVGIA-LIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSK 568
Query: 499 MREL--DPQN 506
M E+ DP N
Sbjct: 569 MLEMGVDPDN 578
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 268/485 (55%), Gaps = 12/485 (2%)
Query: 110 KNIVSWNCMIAGCIDNDR--------IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
K +N ++AG R + DA F +P + +YN ++S G +
Sbjct: 41 KTTADYNRLLAGYARAARPGGRRDRLLADARHLFDRIPRPDAVSYNTLLSCHFAAGDVRG 100
Query: 162 ATRLFEQMPR--RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
A LF MP RNV S+ ML G + G V +ARA+ M +N +SW M++ +
Sbjct: 101 ARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAG 160
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
C A E F PD +N + TAM++G+ G +E A FE + + VS+NA++AGY
Sbjct: 161 DMCAAEECFEDAPD-KENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGY 219
Query: 280 AQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
+N AE+AL +F M++ D++P+++TL SV CS L L GRQ H +
Sbjct: 220 VKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRR 279
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V+ ++++MY +CG + + F ++ ++++WN +I+ +A HG +A+ F +M
Sbjct: 280 VTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKS 339
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
G +P+ ITF+++L+AC H G + M FE M +VYGI +HY+C+VD+L RAG LE
Sbjct: 340 QGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLE 399
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+A + + MPF+ +G+LL A + N+E E AA K+ E +PQN+ YV L+N+YA
Sbjct: 400 RAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYA 459
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASV 578
A W DV+RVR MK+ V K YSW+EI +H F D HP + IH L +
Sbjct: 460 VANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLEE 519
Query: 579 QMKSV 583
+MK++
Sbjct: 520 RMKAM 524
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 182/360 (50%), Gaps = 49/360 (13%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV--KNIVSWNCMIAGCI 123
++ AR LFD++ D +++N +++ ++ G ++ +++LF +MP +N+ SWN M++G
Sbjct: 67 LADARHLFDRIPRPDAVSYNTLLSCHFAAGDVRGARDLFAAMPATARNVTSWNTMLSGLS 126
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLD 182
+ + +A F AMP RN+ ++NAM+S F G + A FE P + N + +TAM+
Sbjct: 127 RSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAEECFEDAPDKENAVLWTAMVS 186
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-PDYD------ 235
G+M G V+KA + M +++VSW ++ GYVKN R +A +F M D D
Sbjct: 187 GYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNES 246
Query: 236 -------------------------------KNVFVVTAMITGFCKVGMLENARLLFERI 264
+ V T++++ +CK G L+ A LF +
Sbjct: 247 TLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEM 306
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ +D +++NAMI+GYA +G EA+ LF M ++P+ T V+V TAC + + G
Sbjct: 307 RIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGM 366
Query: 325 QSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS----PNLVSWNTIIAA 379
Q + G EA V + ++ + R G + E A I S P+ ++ T++ A
Sbjct: 367 QCFERMQEVYGIEARVDHYSCMVDLLCRAGSL---ERAVSLIRSMPFQPHPSAYGTLLNA 423
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 61/313 (19%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK-NI 112
N +S LSR+G + AR +F M ++ I+WNA+++ + G + ++ F+ P K N
Sbjct: 119 NTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAEECFEDAPDKENA 178
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR- 171
V W M++G +D+ ++ A +F+AMP R+ ++NA+++G++K+ R E+A +F+ M R
Sbjct: 179 VLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRD 238
Query: 172 ---------------------------------------RNVISYTAMLDGFMKKGEVDK 192
R V + T+++ + K G++D
Sbjct: 239 ADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDG 298
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDKNVFVVTAMI- 245
A L M ++V++W MI+GY + EA ELF +M P++ V V+TA I
Sbjct: 299 ACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIH 358
Query: 246 TGFCKVGMLENARLLFERIQPKDCVS-----FNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
TG C GM FER+Q + ++ M+ + G E A+ L M
Sbjct: 359 TGMCDFGM-----QCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLIR---SMPF 410
Query: 301 QPDDATLVSVFTA 313
QP + ++ A
Sbjct: 411 QPHPSAYGTLLNA 423
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
+L ++ V + +S + G + A +LF +M +DVI WNA+I+GY +G +E+
Sbjct: 273 KLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIE 332
Query: 103 LFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGF 153
LF+ M + N +++ ++ CI D F+ M E Y+ M+
Sbjct: 333 LFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLL 392
Query: 154 LKHGRLEEATRLFEQMP 170
+ G LE A L MP
Sbjct: 393 CRAGSLERAVSLIRSMP 409
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 35/184 (19%)
Query: 265 QPKDCVSFNAMIAGYA--------QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
Q K +N ++AGYA ++ + +A LF + + D + L F A
Sbjct: 39 QRKTTADYNRLLAGYARAARPGGRRDRLLADARHLFDRIPRPDAVSYNTLLSCHFAA--- 95
Query: 317 LQLLNEGRQSHVLVIRNGFEA------NVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
V R+ F A NV+ N +++ SR G + ++ F + + N
Sbjct: 96 ---------GDVRGARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLAMPARNS 146
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD---GITFLSLLSACGHAGKVNESMDL 427
+SWN +++ FA G A F PD + + +++S +G V ++M
Sbjct: 147 ISWNAMVSCFAHAGDMCAAEECFEDA------PDKENAVLWTAMVSGYMDSGHVEKAMQF 200
Query: 428 FELM 431
FE M
Sbjct: 201 FEAM 204
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 194/649 (29%), Positives = 333/649 (51%), Gaps = 108/649 (16%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++ F + V+N ISA + G + AR LFD+M ++ ++W+A+I+G + G ++ES
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATY---------- 146
F+ P +N+VSW I+G + N +A F + E N T+
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 147 -------------------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
N++I+ L+ G ++ A R+F++M +R+V+S+TA+L
Sbjct: 198 GDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY- 234
D +++ G++ +AR + D M +N +SW+ MI Y ++ EA +LF +M P+
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317
Query: 235 ------------------------------DKNVFVVTAMITGFCKVGMLENARLLFERI 264
DK+VF+ +++I +CK G ++ RL+F+ I
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLI 377
Query: 265 QPKDCVSFNAMIAGYAQNG-------------------------------VAEEALRLFS 293
K+ V +N+M+ GY+ NG E+ L +F+
Sbjct: 378 LEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFN 437
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
++ P+ +T SV AC+++ L++G H +I+ G + ++ V A+ MY++CG
Sbjct: 438 TLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCG 497
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFLSLL 412
I S+ F ++ N +SW +I A+ G ++LI F +M P+ + LS+L
Sbjct: 498 DIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC H G V++ + F M KVYGI P +HYTC+VD+LSR+G+L +A + + +PF+ +
Sbjct: 558 FACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE 617
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
W +LL+ C + ++ E AKK+ +L NSA YV+LSN+YA+AG W DV+ +R L
Sbjct: 618 ANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKL 677
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
M+E+G+ K SW+E+ N+VH F D SH ++I+ L+ +MK
Sbjct: 678 MREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEMK 726
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 218/474 (45%), Gaps = 104/474 (21%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
K + Q+ + D++ N +I+ Y Q G L +++ LF MP +N VSW+ +I+G +
Sbjct: 71 KFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMK 130
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF----EQMPRRNVISYTAM 180
R++++ YF+ P +N ++ A ISGF+++G EA +LF E R N +++T++
Sbjct: 131 YGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSV 190
Query: 181 LD---------------------GF--------------MKKGEVDKARALSDYMSFKNV 205
+ GF ++ GE+D AR + D M ++V
Sbjct: 191 VRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDV 250
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
VSWT ++ YV+ EAR +F MP ++N +AMI
Sbjct: 251 VSWTAILDAYVETGDLREARRIFDEMP--ERNEISWSAMI-------------------- 288
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
A Y+Q+G AEEAL+LFS M++ +P+ + +A ++L+ L+ G
Sbjct: 289 -----------ARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGIN 337
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN----------- 374
H V + G + +V + +++I +Y +CG D L F I N+V WN
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGR 397
Query: 375 --------------------TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
TIIA + ++ EK L F+ + ++G P+ TF S+L A
Sbjct: 398 LEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCA 457
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
C +++ M++ ++K+ GI T L D+ ++ G + + Q+ + MP
Sbjct: 458 CASIASLDKGMNVHGKIIKL-GIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP 510
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 66/365 (18%)
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+L + E ++ ++ +++ M+ +++ G + +AR L D M +N VSW+ +I
Sbjct: 66 YLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALI 125
Query: 213 TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+G +K R E+ F R P +NV TA I+GF +
Sbjct: 126 SGLMKYGRVEESMWYFERNP--FQNVVSWTAAISGFVR---------------------- 161
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NG+ EAL+LF +++ ++P+D T SV AC L G LV++
Sbjct: 162 ---------NGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVK 212
Query: 333 NGFEANVSVCNAVITMYSRCG---------------------GILDSELA---------- 361
GFE +SV N++IT+ R G ILD+ +
Sbjct: 213 AGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRI 272
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F ++ N +SW+ +IA ++Q G+ E+AL FS+M GF P+ F LSA +
Sbjct: 273 FDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRAL 332
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ +++ + K+ GI + L+D+ + G+ + ++ + E + W S++
Sbjct: 333 SAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILEKNVVCWNSMVG 390
Query: 482 ACVIN 486
IN
Sbjct: 391 GYSIN 395
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT 89
CG P + L + V N+ + S G++ +LF+ + K+ ++W II
Sbjct: 364 CGK--PDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIA 421
Query: 90 GYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAM----PER 141
GY +N ++ +F ++ V N +++ ++ C +D + + +
Sbjct: 422 GYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQY 481
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ A+ + K G + + ++FE+MP +N IS+T M+ G + G
Sbjct: 482 DIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESG 528
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 194/648 (29%), Positives = 332/648 (51%), Gaps = 108/648 (16%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++ F + V+N ISA + G + AR LFD+M ++ ++W+A+I+G + G ++ES
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATY---------- 146
F+ P +N+VSW I+G + N +A F + E N T+
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 147 -------------------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
N++I+ L+ G ++ A R+F++M +R+V+S+TA+L
Sbjct: 198 GDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY- 234
D +++ G++ +AR + D M +N +SW+ MI Y ++ EA +LF +M P+
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317
Query: 235 ------------------------------DKNVFVVTAMITGFCKVGMLENARLLFERI 264
DK+VF+ +++I +CK G ++ RL+F+ I
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLI 377
Query: 265 QPKDCVSFNAMIAGYAQNG-------------------------------VAEEALRLFS 293
K+ V +N+M+ GY+ NG E+ L +F+
Sbjct: 378 LEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFN 437
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
++ P+ +T SV AC+++ L++G H +I+ G + ++ V A+ MY++CG
Sbjct: 438 TLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCG 497
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFLSLL 412
I S+ F ++ N +SW +I A+ G ++LI F +M P+ + LS+L
Sbjct: 498 DIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC H G V++ + F M KVYGI P +HYTC+VD+LSR+G+L +A + + +PF+ +
Sbjct: 558 FACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE 617
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
W +LL+ C + ++ E AKK+ +L NSA YV+LSN+YA+AG W DV+ +R L
Sbjct: 618 ANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKL 677
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
M+E+G+ K SW+E+ N+VH F D SH D+I+ L+ +M
Sbjct: 678 MREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLLRSEM 725
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 218/474 (45%), Gaps = 104/474 (21%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
K + Q+ + D++ N +I+ Y Q G L +++ LF MP +N VSW+ +I+G +
Sbjct: 71 KFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMK 130
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF----EQMPRRNVISYTAM 180
R++++ YF+ P +N ++ A ISGF+++G EA +LF E R N +++T++
Sbjct: 131 YGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSV 190
Query: 181 LD---------------------GF--------------MKKGEVDKARALSDYMSFKNV 205
+ GF ++ GE+D AR + D M ++V
Sbjct: 191 VRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDV 250
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
VSWT ++ YV+ EAR +F MP ++N +AMI
Sbjct: 251 VSWTAILDAYVETGDLREARRIFDEMP--ERNEISWSAMI-------------------- 288
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
A Y+Q+G AEEAL+LFS M++ +P+ + +A ++L+ L+ G
Sbjct: 289 -----------ARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGIN 337
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN----------- 374
H V + G + +V + +++I +Y +CG D L F I N+V WN
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGR 397
Query: 375 --------------------TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
TIJA + ++ EK L F+ + ++G P+ TF S+L A
Sbjct: 398 LEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCA 457
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
C +++ M++ ++K+ GI T L D+ ++ G + + Q+ + MP
Sbjct: 458 CASIASLDKGMNVHGKIIKL-GIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP 510
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 66/365 (18%)
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+L + E ++ ++ +++ M+ +++ G + +AR L D M +N VSW+ +I
Sbjct: 66 YLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALI 125
Query: 213 TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+G +K R E+ F R P +NV TA I+GF +
Sbjct: 126 SGLMKYGRVEESMWYFERNP--FQNVVSWTAAISGFVR---------------------- 161
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NG+ EAL+LF +++ ++P+D T SV AC L G LV++
Sbjct: 162 ---------NGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVK 212
Query: 333 NGFEANVSVCNAVITMYSRCG---------------------GILDSELA---------- 361
GFE +SV N++IT+ R G ILD+ +
Sbjct: 213 AGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRI 272
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F ++ N +SW+ +IA ++Q G+ E+AL FS+M GF P+ F LSA +
Sbjct: 273 FDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRAL 332
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ +++ + K+ GI + L+D+ + G+ + ++ + E + W S++
Sbjct: 333 SAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILEKNVVCWNSMVG 390
Query: 482 ACVIN 486
IN
Sbjct: 391 GYSIN 395
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT 89
CG P + L + V N+ + S G++ +LF+ + K+ +W IJ
Sbjct: 364 CGK--PDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJA 421
Query: 90 GYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAM----PER 141
GY +N ++ +F ++ V N +++ ++ C +D + + +
Sbjct: 422 GYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQY 481
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ A+ + K G + + ++FE+MP +N IS+T M+ G + G
Sbjct: 482 DIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESG 528
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 181/503 (35%), Positives = 289/503 (57%), Gaps = 14/503 (2%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N+++ Y + G +K +F M VK+I SWN MIA + ++D A F+ M ER+
Sbjct: 185 NSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 145 TYNAMISGFLKHGRLEEATRLFEQM-------PRR----NVISYTAMLDGFMKKGEVDKA 193
T+N+MISG+ + G A +F +M P R +V+S A L+ GE +
Sbjct: 245 TWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCI-GEQIHS 303
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
++ +V +I+ Y + AR L + D + TA++ G+ K+G
Sbjct: 304 HIVTTGFDISGIV-LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ A+ +F+ ++ +D V++ AMI GY Q+G+ EA+ LF M+ + +P+ TL ++ +
Sbjct: 363 MNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSV 422
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVS 372
S+L L G+Q H +++G +VSV NA+ITMY++ G I + AF I + VS
Sbjct: 423 ASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVS 482
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
W ++I A AQHGH E+AL F M + G PD IT++ + SAC HAG VN+ F++M
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
V IIP+ HY C+VD+ RAG L++A + + MP E D WGSLL+AC + N++LG
Sbjct: 543 DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLG 602
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNK 552
++AA+++ L+P+NS Y L+NLY+A G W + ++R MK+ V K+ +SWIE+ +K
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHK 662
Query: 553 VHYFLGGDMSHPCIDKIHLELKR 575
VH F D HP ++I++ +K+
Sbjct: 663 VHAFGVEDGIHPQKNEIYITMKK 685
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 235/511 (45%), Gaps = 123/511 (24%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L V V+N+ ++ ++ G A+ +FD+M KD+ +WNA+I + Q G + +
Sbjct: 172 IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLA 231
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDD--AFDYFQAM-------PERNT-------- 143
F+ M ++IV+WN MI+G N R D A D F M P+R T
Sbjct: 232 MAQFEQMAERDIVTWNSMISGY--NQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSAC 289
Query: 144 -------------------------ATYNAMISGFLKHGRLEEATRLFEQMPRRN--VIS 176
NA+IS + + G +E A RL EQ ++ +
Sbjct: 290 ANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEG 349
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+TA+LDG++K G++++A+ + D + ++VV+WT MI GY ++ + EA LF M ++
Sbjct: 350 FTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQ 409
Query: 237 -------------------------------------NVFVVTAMITGFCKVGMLENARL 259
+V V A+IT + K G + +A
Sbjct: 410 RPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASR 469
Query: 260 LFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
F+ I+ +D VS+ +MI AQ+G AEEAL LF M+ ++PD T V VF+AC+
Sbjct: 470 AFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L+N+GRQ M I+ P L + ++
Sbjct: 530 LVNQGRQ-------------------YFDMMKDVDKII-----------PTLSHYACMVD 559
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
F + G ++A F +M + +PD +T+ SLLSAC +V +++DL ++ + ++
Sbjct: 560 LFGRAGLLQEAQEFIEKMPI---EPDVVTWGSLLSAC----RVYKNIDLGKVAAERLLLL 612
Query: 439 --PSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+S Y+ L ++ S G+ E+A +I + M
Sbjct: 613 EPENSGAYSALANLYSACGKWEEAAKIRKSM 643
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 201/440 (45%), Gaps = 45/440 (10%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N ++ Y + G+ ++ LF MP++ SWN +++ +D + ++F +P+R++
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSV 112
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYM 200
++ MI G+ G+ +A R+ +M R + + T +L ++ + + ++
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFI 172
Query: 201 S----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
NV ++ Y K A+ +F RM K++ AMI +VG ++
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRM--VVKDISSWNAMIALHMQVGQMDL 230
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM-QPDDATLVSVFTACS 315
A FE++ +D V++N+MI+GY Q G AL +FS M++ M PD TL SV +AC+
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACA 290
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI-------------------- 355
L+ L G Q H ++ GF+ + V NA+I+MYSRCGG+
Sbjct: 291 NLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350
Query: 356 ---LDSELA----------FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
LD + F + ++V+W +I + QHG Y +A+ F M
Sbjct: 351 TALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQR 410
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P+ T ++LS + + VK G I S L+ + ++AG + A +
Sbjct: 411 PNSYTLAAMLSVASSLASLGHGKQIHGSAVK-SGEIYSVSVSNALITMYAKAGSITSASR 469
Query: 463 ITQGMPFEADTGVWGSLLAA 482
+ E DT W S++ A
Sbjct: 470 AFDLIRCERDTVSWTSMIIA 489
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 199/585 (34%), Positives = 315/585 (53%), Gaps = 25/585 (4%)
Query: 17 FPPILRILSTPDSCGNFTPHSS-NCLIRLFSTQY-VFVNNAKISALSRAGKISAARQLFD 74
FPP+L+ +CG +C Q+ VFV + I SR G AR LFD
Sbjct: 221 FPPVLK------ACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 274
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDD 130
M +D+ +WNA+I+G QNG ++ ++ M ++ N V+ ++ C I
Sbjct: 275 DMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIST 334
Query: 131 A----FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
A + E + NA+I+ + K G LE+A + F+QM +V+S+ +++ + +
Sbjct: 335 AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQ 394
Query: 187 KGEVDKARALSDYM---SFKNVVSWTVMITGYVKNERFCE----ARELFYRMPDYDKNVF 239
+ A M F+ + V + V R C+ R ++V
Sbjct: 395 NDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVV 454
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-M 298
+ A++ + K+G+L++A +FE I KD +S+N +I GYAQNG+A EA+ ++ M +
Sbjct: 455 IGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECK 514
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++ P+ T VS+ A + + L +G + H VI+ +V V +I +Y +CG ++D+
Sbjct: 515 EIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDA 574
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F Q+ + V+WN II+ HGH EK L F +M G PD +TF+SLLSAC H+
Sbjct: 575 MSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHS 634
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E F LM + YGI PS +HY C+VD+L RAG LE A+ + MP + D +WG+
Sbjct: 635 GFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGA 693
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL AC I+ N+ELG+ A+ ++ E+D +N YV+LSN+YA G W V +VR L +E+G+
Sbjct: 694 LLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGL 753
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
K +S IE+ KV F G+ SHP +I+ EL+ + +MKS+
Sbjct: 754 KKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSL 798
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 16/180 (8%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H L++ G ++ + ++ +Y+ G + S F QI ++ +WN++I+A+ +GH+
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHF 198
Query: 387 EKALIFFSQMGL-NGFDPDGITFLSLLSACGHA--GKVNESMDLFELMVKVYGIIPSSEH 443
+A+ F Q+ L + PD TF +L ACG G+ F+L + + +S
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCW-AFKLGFQWNVFVAAS-- 255
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
L+ + SR G A + MPF D G W ++++ + N N AA+ + LD
Sbjct: 256 ---LIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN------AAQALDVLD 305
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 329/586 (56%), Gaps = 29/586 (4%)
Query: 17 FPPILRILSTPDSCGNFTPHSS-NCLIRLFSTQY-VFVNNAKISALSRAGKISAARQLFD 74
FP +L+ +C N T + +CL F + V+V + I R G + AR LFD
Sbjct: 156 FPSVLK------ACRNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFD 209
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI---DNDRIDDA 131
+M T+D+ +WNA+I+GY Q+G +E+ L + + V+ +++ C D +R
Sbjct: 210 EMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTI 269
Query: 132 FDY-FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF------ 184
Y + E N +I + + G L++ ++F++M R++IS+ +++ +
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 185 ----MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF-YRMPDYDKNVF 239
+ E+ +R D ++ ++ S I + R C + + F R + +++
Sbjct: 330 LRAILLFQEMRLSRIQPDCLTLISLAS----ILSQLGEIRACRSVQGFTLRKGWFLEDIT 385
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM- 298
+ A++ + K+G++++AR +F + KD +S+N +I+GYAQNG A EA+ +++ M +
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 299 -DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
++ + T VSV ACS L +G + H +++NG +V V ++ MY +CG + D
Sbjct: 446 GEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDD 505
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F QI N V WNT+IA HGH EKA++ F +M G PD ITF++LLSAC H
Sbjct: 506 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 565
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
+G V+E FE+M YGI PS +HY C+VD+ RAGQLE A + MP + D +WG
Sbjct: 566 SGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWG 625
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+LL+AC ++ NV+LG++A++ + E++P++ +V+LSN+YA+AG W V +R + +G
Sbjct: 626 ALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKG 685
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+ K +S +E+ NKV F G+ +HP ++++ EL ++K V
Sbjct: 686 LRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMV 731
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 309 SVFTACSALQLLNEGRQSHV-LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
++F C+ LQ + H LV+ N + NV + ++ +Y G + + F IH+
Sbjct: 59 TLFRYCTNLQ---SAKCLHARLVVSNAIQ-NVCISAKLVNLYCYLGNVALARYTFDHIHN 114
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGL-NGFDPDGITFLSLLSACGHAGKVNESMD 426
++ +WN +I+ + + G+ + + FS L +G PD TF S+L AC + N+
Sbjct: 115 RDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHC 174
Query: 427 L---FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
L F M VY + +S L+ + R G + A + MP D G W ++++
Sbjct: 175 LALKFGFMWDVY--VAAS-----LIHLYCRYGAVVNARILFDEMPTR-DMGSWNAMISGY 226
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVT 527
+ N + + +R +D + V +LS A R VT
Sbjct: 227 CQSGNAKEALTLSDGLRAMD--SVTVVSLLSACTEAGDFNRGVT 268
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 315/586 (53%), Gaps = 26/586 (4%)
Query: 17 FPPILRILSTPDSCGNFTPHSS--NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
FPPIL+ +C + C+ ++ VFV + + SR G + A ++F
Sbjct: 127 FPPILK------ACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFV 180
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI-----DNDRID 129
M KDV +WNA+I+G+ QNG + + M + + +A + +D I+
Sbjct: 181 DMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240
Query: 130 DAFDYFQAMP---ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
+ + + + NA+I+ + K GRL++A +F+QM R+++S+ +++ + +
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300
Query: 187 KGEVDKARALSDYMSFK-------NVVSWTVMITGYVKNERFCEARELFY-RMPDYDKNV 238
+ A M VVS T + + + ++R + F R DK+V
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFS-QLSDQRISRSILGFVIRREWLDKDV 359
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK- 297
+ A++ + K+G + A +F+++ KD +S+N ++ GY QNG+A EA+ ++ M +
Sbjct: 360 VIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEEC 419
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
D P+ T VS+ A S + L +G + H +I+N +V V +I +Y +CG + D
Sbjct: 420 RDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLED 479
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F +I V WN IIA+ HG E+AL F M D ITF+SLLSAC H
Sbjct: 480 AMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH 539
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
+G V+E F++M K YGI PS +HY C+VD+L RAG LEKA+++ + MP + D +WG
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+LL+AC I N ELG LA+ ++ E+D +N YV+LSN+YA W V +VR L +++G
Sbjct: 600 ALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRG 659
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+ K +S + +G+K F G+ +HP +I+ ELK S +MKS+
Sbjct: 660 LRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSL 705
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 178/361 (49%), Gaps = 24/361 (6%)
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA------- 193
+N +I+ ++ HG + + F+ + ++N+ S+ +++ +++ G+ +A
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 194 -------RALSDYMSFKNVVSWTV-MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
D+ +F ++ V ++ G K C ++M ++ +VFV +++
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSLVDG--KKVHCC-----VFKM-GFEDDVFVAASLV 163
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ + G+L+ A +F + KD S+NAMI+G+ QNG A AL + + M ++ D
Sbjct: 164 HLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTI 223
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T+ S+ C+ + G H+ V+++G +++V V NA+I MYS+ G + D+++ F Q+
Sbjct: 224 TVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQM 283
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+LVSWN+IIAA+ Q+ AL FF M L G PD +T +SL S S
Sbjct: 284 EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISR 343
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
+ +++ + LV++ ++ G + A + +P DT W +L+
Sbjct: 344 SILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTISWNTLVTGYTQ 402
Query: 486 N 486
N
Sbjct: 403 N 403
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 18/192 (9%)
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
DA ++F +C + N ++ H L++ G N+ + +I +Y G I S F
Sbjct: 22 DADFNALFNSCVNV---NATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKAL----IFFSQMGLNGFDPDGITFLSLLSACGH-- 417
IH N+ SWN+II+A+ + G Y +A+ FS G PD TF +L AC
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV 138
Query: 418 -AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
KV+ +F++ + + +S LV + SR G L+ A ++ MP + D G W
Sbjct: 139 DGKKVHCC--VFKMGFEDDVFVAAS-----LVHLYSRYGVLDVAHKVFVDMPVK-DVGSW 190
Query: 477 GSLLAACVINLN 488
++++ N N
Sbjct: 191 NAMISGFCQNGN 202
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 195/647 (30%), Positives = 322/647 (49%), Gaps = 115/647 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A I + G + ARQ+FD M +D + WN ++ GY + G + + LF M
Sbjct: 181 MFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRA 240
Query: 110 K----NIVSWNCMIA-GCIDNDR----------------------------------IDD 130
N + C ++ ++D +DD
Sbjct: 241 SGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDD 300
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR------------------- 171
+ F MP + T+N MISG +++G +++A LF M +
Sbjct: 301 GWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTD 360
Query: 172 ---------------RNVIS-----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
RN + +A++D + K V A+++ D +VV + M
Sbjct: 361 LNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTM 420
Query: 212 ITGYVKNERFCEARELFYRMPD-------------------------------------Y 234
I+GYV N EA ++F + + Y
Sbjct: 421 ISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY 480
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ +V +A++ + K G L+ + +F +I KD V++N+MI+ +AQNG EEAL LF
Sbjct: 481 EGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFRE 540
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M ++ + T+ SV +AC++L + G++ H +VI+ A++ +A+I MY +CG
Sbjct: 541 MCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGN 600
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F + N VSWN+IIA++ +G ++++ M GF D +TFL+L+SA
Sbjct: 601 LEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSA 660
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C HAG+V E + LF M + Y I P EH+ C+VD+ SRAG+L+KA ++ MPF+ D G
Sbjct: 661 CAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAG 720
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+WG+LL AC ++ NVEL E+A++++ +LDP NS YV++SN+ A AG W V++VR LMK
Sbjct: 721 IWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMK 780
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+ V K YSW+++ N H F+ D SHP + I++ LK ++++
Sbjct: 781 DTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELR 827
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 19/307 (6%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNV---ISYTAMLDGFMKKGEVDKA----- 193
+TA ++ ++ R +A +F +PR + + ++ G G+ A
Sbjct: 74 DTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYL 133
Query: 194 -------RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
L D +F VV + G + R R D ++FV +A+I
Sbjct: 134 KMWAHPSAPLPDSHTFPYVVK-SCAALGAIALGRLVHRTA---RTLGLDGDMFVGSALIK 189
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ G+L +AR +F+ + +DCV +N M+ GY + G A+ LF M +P+ AT
Sbjct: 190 MYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFAT 249
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
L + + L G Q H L ++ G E+ V+V N +++MY++C + D F +
Sbjct: 250 LACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP 309
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+LV+WN +I+ Q+G ++AL+ F M +G PD +T +SLL A N+ +
Sbjct: 310 RDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKE 369
Query: 427 LFELMVK 433
L +V+
Sbjct: 370 LHGYIVR 376
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 4/219 (1%)
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP--DDATLVSVFTACSALQLLNEGRQSH 327
+ +N +I G G AL + M P D T V +C+AL + GR H
Sbjct: 110 LPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVH 169
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
G + ++ V +A+I MY+ G + D+ F + + V WN ++ + + G
Sbjct: 170 RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVS 229
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
A+ F M +G +P+ T LS + + L L VK YG+ L
Sbjct: 230 SAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVK-YGLESEVAVANTL 288
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
V + ++ L+ W++ MP + D W +++ CV N
Sbjct: 289 VSMYAKCKCLDDGWKLFGLMPRD-DLVTWNGMISGCVQN 326
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/503 (35%), Positives = 279/503 (55%), Gaps = 18/503 (3%)
Query: 96 FLQESKNLFQSMPV--KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
+ ++ LF P ++ +W +IAG + ND + A + + M + +NAMISG+
Sbjct: 190 LMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGY 249
Query: 154 LKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+ G EEA L +M + +YT+++ G + R + Y+ + VV +
Sbjct: 250 VHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYV-LRTVVQPS 308
Query: 210 ---------VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
+IT Y + + EAR +F +MP K++ A+++G +E A +
Sbjct: 309 GHFVLSVNNALITLYTRCGKLVEARRVFDKMPV--KDLVSWNAILSGCVNARRIEEANSI 366
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F + + +++ MI+G AQNG EE L+LF+ M ++P D +CS L L
Sbjct: 367 FREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSL 426
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+ G+Q H +I+ G ++++SV NA+ITMYSRCG + ++ F + + VSWN +IAA
Sbjct: 427 DNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAAL 486
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
AQHGH +A+ + +M PD ITFL++LSAC HAG V E F+ M YGI P
Sbjct: 487 AQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPE 546
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
+HY+ L+D+L RAG +A +T+ MPFE +W +LLA C I+ N+ELG AA ++
Sbjct: 547 EDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLL 606
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
EL PQ Y+ LSN+YAA G W +V RVR LM+E+GV K+ SWIE+ N VH FL D
Sbjct: 607 ELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDD 666
Query: 561 MSHPCIDKIHLELKRASVQMKSV 583
HP + ++ L++ +M+ +
Sbjct: 667 AVHPEVHAVYRYLEQLVHEMRKL 689
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 201/456 (44%), Gaps = 63/456 (13%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--RN 142
N +I Y ++ + ++ LF +P +IV+ M++ I A F A P R+
Sbjct: 35 NRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRD 94
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVI----SYTAMLDGF-------------- 184
T +YNAMI+ F A +LF QM R + +++++L
Sbjct: 95 TVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLH 154
Query: 185 ---MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
K G + L+ MS + + ++ V AR+LF P ++
Sbjct: 155 CEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCV---LMAAARKLFDEAPPGRRDEPAW 211
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
T +I G+ + L AR L E + V++NAMI+GY G EEA L M + +Q
Sbjct: 212 TTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQ 271
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN----VSVCNAVITMYSRCGGILD 357
D+ T SV +A S L N GRQ H V+R + + +SV NA+IT+Y+RCG +++
Sbjct: 272 LDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVE 331
Query: 358 SELAFRQIHSPNLVSWNTI-------------------------------IAAFAQHGHY 386
+ F ++ +LVSWN I I+ AQ+G
Sbjct: 332 ARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFG 391
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
E+ L F+QM L G +P + +++C G ++ L ++++ G S
Sbjct: 392 EEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQL-GHDSSLSVGNA 450
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+ + SR G +E A + MP+ D+ W +++AA
Sbjct: 451 LITMYSRCGLVEAADTVFLTMPY-VDSVSWNAMIAA 485
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 200/450 (44%), Gaps = 85/450 (18%)
Query: 66 ISAARQLFDQMTT--KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
++AAR+LFD+ +D W II GY +N L ++ L + M V+WN MI+G +
Sbjct: 191 MAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYV 250
Query: 124 DNDRIDDAFDYFQAMPE--------------------------RNTATY----------- 146
++AFD + M R Y
Sbjct: 251 HRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGH 310
Query: 147 ------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
NA+I+ + + G+L EA R+F++MP ++++S+ A+L G + +++A ++ M
Sbjct: 311 FVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREM 370
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMP-------DY------------------- 234
+++++WTVMI+G +N E +LF +M DY
Sbjct: 371 PVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQ 430
Query: 235 -----------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
D ++ V A+IT + + G++E A +F + D VS+NAMIA AQ+G
Sbjct: 431 QLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHG 490
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVC 342
+A++L+ M+K D+ PD T +++ +ACS L+ EGR + + G
Sbjct: 491 HGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHY 550
Query: 343 NAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
+ +I + R G +++ + P W ++A HG+ E + ++
Sbjct: 551 SRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMP 610
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELM 431
DG T++SL + G+ +E + +LM
Sbjct: 611 QQDG-TYISLSNMYAALGQWDEVARVRKLM 639
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
VNNA I+ +R GK+ AR++FD+M KD+++WNAI++G ++E+ ++F+ MPV++
Sbjct: 315 VNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRS 374
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFE 167
+++W MI+G N ++ F M E Y I+ G L+ +L
Sbjct: 375 LLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHS 434
Query: 168 QMPRRNVISY----TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
Q+ + S A++ + + G V+ A + M + + VSW MI ++ +
Sbjct: 435 QIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQ 494
Query: 224 ARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQ 265
A +L+ +M D + +++ G+++ R F+ ++
Sbjct: 495 AIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMR 538
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 165/386 (42%), Gaps = 59/386 (15%)
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER--IQPKD 268
+I Y K+ AR LF ++P D + T M++ + G ++ A LF + +D
Sbjct: 37 LIDHYCKSFNIPYARYLFDKIPKPD--IVAATTMLSAYSAAGNIKLAHQLFNATPMSIRD 94
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL-QLLNEGRQSH 327
VS+NAMI ++ + AL+LF M ++ PD T SV A S + +Q H
Sbjct: 95 TVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLH 154
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGG---------------ILDSELAFRQ-------- 364
V + G + SV NA+++ Y C + D R+
Sbjct: 155 CEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTI 214
Query: 365 ----IHSPNL---------------VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ + +L V+WN +I+ + G YE+A +M G D
Sbjct: 215 IAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDE 274
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT-----CLVDILSRAGQLEKA 460
T+ S++SA +AG N + +++ ++ S H+ L+ + +R G+L +A
Sbjct: 275 YTYTSVISAASNAGLFNIGRQVHAYVLRT--VVQPSGHFVLSVNNALITLYTRCGKLVEA 332
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
++ MP + D W ++L+ CV N E A RE+ ++ + ++ + A
Sbjct: 333 RRVFDKMPVK-DLVSWNAILSGCV---NARRIEEANSIFREMPVRSLLTWTVMISGLAQN 388
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSW 546
G + ++ MK +G+ + C Y++
Sbjct: 389 GFGEEGLKLFNQMKLEGL-EPCDYAY 413
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+L + V NA I+ SR G + AA +F M D ++WNA+I Q+G ++
Sbjct: 436 IIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQA 495
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAM 149
L++ M ++I +++ +++ C + + YF M PE + Y+ +
Sbjct: 496 IQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEED--HYSRL 553
Query: 150 ISGFLKHGRLEEATRLFEQMP 170
I + G EA + E MP
Sbjct: 554 IDLLCRAGMFSEAKNVTESMP 574
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/538 (34%), Positives = 301/538 (55%), Gaps = 12/538 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF + A +SAL R G L T DV+ A + Y + L +++ LF S+P
Sbjct: 281 VFRSCAGLSAL-RLGSQLHGHALKTDFGT-DVVIGTATLDMYMKCNNLSDAQKLFNSLPN 338
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
N+ S+N +I G +D+ + + R A + G HG + +
Sbjct: 339 HNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLS------MKSL 392
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
+ N+ A+LD + K G + +A + + M ++ VSW +I + +N + LF
Sbjct: 393 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFI 452
Query: 230 R----MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ FV A+I + K GM+E A L +R+ + VS+NA+I+G++ +
Sbjct: 453 HNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQS 512
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EEA + FS M++M + PD+ T ++ C+ L + G+Q H +I+ +++ + + +
Sbjct: 513 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTL 572
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MYS+CG + D +L F + + + V+WN ++ +AQHG E+AL F M L P+
Sbjct: 573 VDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNH 632
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
TFL++L ACGH G V + + F M+ YG+ P EHY+C+VDI+ R+GQ+ KA ++ +
Sbjct: 633 ATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIE 692
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
GMPFEAD +W +LL+ C I+ NVE+ E AA + +L+P++SA YV+LSN+YA AGMW +
Sbjct: 693 GMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNE 752
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
VT++R +M+ G+ K+ SWIEI ++VH FL GD +HP +I+ L + +MK V
Sbjct: 753 VTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWV 810
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 151/576 (26%), Positives = 258/576 (44%), Gaps = 79/576 (13%)
Query: 5 SYFHQTYLKRILFPPILRILSTPDS-CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRA 63
S + T K+ F I + S + C H+ L T VFV N I +
Sbjct: 33 SSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPT--VFVTNCLIQMYIKC 90
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
+ A ++FD M +D ++WNA++ GY G + ++ LF +MP +++VSWN +I+G +
Sbjct: 91 SDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYL 150
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLK-------HGRLEEATRLFEQMPRR-NVI 175
N D F M T + LK HG + L +M +V+
Sbjct: 151 HNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVV 210
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM---- 231
+ +A+LD + K ++D + M KN VSW+ +I G V+N+ ELF M
Sbjct: 211 TGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAG 270
Query: 232 ---------------------------------PDYDKNVFVVTAMITGFCKVGMLENAR 258
D+ +V + TA + + K L +A+
Sbjct: 271 VGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQ 330
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
LF + + S+NA+I GYA+ +++ L L D+ +L F AC+ ++
Sbjct: 331 KLFNSLPNHNLQSYNAIIVGYAR---SDKGLGL-----------DEVSLSGAFRACAVIK 376
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
EG Q H L +++ ++N+ V NA++ MY +CG ++++ L F ++ S + VSWN IIA
Sbjct: 377 GDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIA 436
Query: 379 AFAQHGHYEKALIFF-------SQMGLNGFDPDGITFLSLLSACGHAGKVNESMD-LFEL 430
A Q+G+ EK L F S++GL+ F GI + + S CG K + D L E
Sbjct: 437 AHEQNGNEEKTLSLFIHNRIIKSRLGLDSF--VGIALIDMYSKCGMMEKAEKLHDRLAEQ 494
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
V + I S + ++ + +K + M + D + ++L C + VE
Sbjct: 495 TVVSWNAIISG------FSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVE 548
Query: 491 LGELAAKKMRELDPQNSA-VYVMLSNLYAAAGMWRD 525
LG+ ++ + + Q+ A + L ++Y+ G +D
Sbjct: 549 LGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQD 584
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 193/441 (43%), Gaps = 41/441 (9%)
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
NC+I I ++ AF F MP+R+T ++NAM+ G+ G + A +LF+ MP R+V+
Sbjct: 81 NCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVV 140
Query: 176 SYTAMLDGFMKKGE----VDKARALSDYMSFKNVVSWTVMITGYVKNERF---CEARELF 228
S+ +++ G++ G+ +D + + + ++ V++ E + L
Sbjct: 141 SWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLA 200
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+M +D +V +A++ + K L+ + F + K+ VS++A+IAG QN
Sbjct: 201 VKM-GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGG 259
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
L LF M K + +T SVF +C+ L L G Q H ++ F +V + A + M
Sbjct: 260 LELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDM 319
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y +C + D++ F + + NL S+N II +A+ G D ++
Sbjct: 320 YMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD--------------KGLGLDEVSL 365
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC----LVDILSRAGQLEKAWQIT 464
AC DL L V + + C ++D+ + G L +A +
Sbjct: 366 SGAFRACAVI-----KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVF 420
Query: 465 QGMPFEADTGVWGSLLAACVINLNVE------LGELAAKKMRELDPQNSAVYVMLSNLYA 518
+ M D W +++AA N N E + K LD S V + L ++Y+
Sbjct: 421 EEM-VSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLD---SFVGIALIDMYS 476
Query: 519 AAGMWRDVTRVRLLMKEQGVT 539
GM ++ + EQ V
Sbjct: 477 KCGMMEKAEKLHDRLAEQTVV 497
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 301/549 (54%), Gaps = 18/549 (3%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR + VF NA + S+ G I A +F ++ DV++WNA I+G +G Q +
Sbjct: 228 VIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHA 287
Query: 101 KNLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN----AMISG 152
L M V N+ + + ++ C + + M + N + N ++
Sbjct: 288 LELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDM 347
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK------NVV 206
+ KHG L++A ++F+ +P+R+++ + A++ G + A ALS + + N
Sbjct: 348 YAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQ--HAEALSLFCRMRKEGFDVNRT 405
Query: 207 SWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
+ ++ E + R++ + + VV +I + K L A +FE+
Sbjct: 406 TLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKH 465
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
D ++F +MI +Q E+A++LF M++ + PD L S+ AC++L +G+
Sbjct: 466 GSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGK 525
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H +I+ F ++V NA++ Y++CG I D++LAF + +VSW+ +I AQHG
Sbjct: 526 QVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHG 585
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
H ++AL F +M P+ IT S+L AC HAG V+E+ F M +++GI + EHY
Sbjct: 586 HGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHY 645
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C++D+L RAG+L+ A ++ MPF+ + VWG+LLAA ++ + ELG LAA+K+ L+P
Sbjct: 646 ACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEP 705
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
+ S +V+L+N YA+AGMW DV +VR LMK+ V K+ A SW+E+ +KVH F+ GD SHP
Sbjct: 706 EKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHP 765
Query: 565 CIDKIHLEL 573
I+ +L
Sbjct: 766 RARDIYAKL 774
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 170/348 (48%), Gaps = 20/348 (5%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N ++S + K A R+F+++P +S+++++ + A +F+++
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALG-----AFRSMR 95
Query: 207 SWTVMITGYV--------KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
S +V +V + F ++FV A++ + G ++ AR
Sbjct: 96 SCSVRCNEFVLPVVLKCAPDAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEAR 155
Query: 259 LLFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
++F+ ++ VS+N +++ Y +N A+++F M+ +QP++ V AC+
Sbjct: 156 MVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGS 215
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
+ L GR+ H +VIR G++ +V NA++ MYS+ G I + + F ++ ++VSWN I
Sbjct: 216 RDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFI 275
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
+ HGH + AL QM +G P+ T S+L AC +G N + MVK
Sbjct: 276 SGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANA- 334
Query: 438 IPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
S++Y LVD+ ++ G L+ A ++ +P + D +W +L++ C
Sbjct: 335 --DSDNYIAFGLVDMYAKHGLLDDAKKVFDWIP-QRDLVLWNALISGC 379
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 200/458 (43%), Gaps = 65/458 (14%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNL 103
L S + N +S S+ +AR++FD++ ++W++++T Y N +++
Sbjct: 31 LKSGLFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGA 90
Query: 104 FQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEAT 163
F+SM + V N + + + P+ T + L AT
Sbjct: 91 FRSMRSCS-VRCNEFVLPVV-----------LKCAPDAGFGT---------QLHALAMAT 129
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF-KNVVSWTVMITGYVKNERFC 222
L + N + AM GF G VD+AR + D +N VSW +++ YVKN+R
Sbjct: 130 GLGGDIFVANAL--VAMYGGF---GFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCS 184
Query: 223 EARELFYRM------PD-------------------------------YDKNVFVVTAMI 245
A ++F M P+ YDK+VF A++
Sbjct: 185 HAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALV 244
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K+G + A ++F ++ D VS+NA I+G +G + AL L M + P+
Sbjct: 245 DMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVF 304
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
TL S+ AC+ N GRQ H +++ +++ + ++ MY++ G + D++ F I
Sbjct: 305 TLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWI 364
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+LV WN +I+ + + +AL F +M GFD + T ++L + ++++
Sbjct: 365 PQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTR 424
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ L K+ G + S L+D + L A+++
Sbjct: 425 QVHALAEKL-GFLSDSHVVNGLIDSYWKCDCLNYAYRV 461
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 130/282 (46%), Gaps = 13/282 (4%)
Query: 244 MITGFCKVGMLENARLLFERIQPKDC-VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
+++ + K + +AR +F+ I P C VS+++++ Y+ N + +AL F M ++
Sbjct: 43 LLSFYSKCRLPGSARRVFDEI-PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRC 101
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
++ L V G Q H L + G ++ V NA++ MY G + ++ + F
Sbjct: 102 NEFVLPVVLKCAPDAGF---GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVF 158
Query: 363 RQIHSP-NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
+ N VSWN +++A+ ++ A+ F +M G P+ F +++AC + +
Sbjct: 159 DEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDL 218
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ ++++ G LVD+ S+ G + A + +P E D W + ++
Sbjct: 219 EAGRKVHAMVIRT-GYDKDVFTANALVDMYSKLGDIRMAAVVFGKVP-ETDVVSWNAFIS 276
Query: 482 ACVINLNVE--LGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
CV++ + + L L K L P V+ + S L A AG
Sbjct: 277 GCVLHGHDQHALELLLQMKSSGLVPN---VFTLSSILKACAG 315
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/566 (31%), Positives = 299/566 (52%), Gaps = 49/566 (8%)
Query: 57 ISALSRAGKISAARQLFDQMT----TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
++A + + I A RQ+ + KDV T NA++ Y + G + + +F+ MP ++
Sbjct: 209 VNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDV 268
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH----GRLEEATRLFEQ 168
VSWN +I+GC+ N A + M M+S LK G + ++
Sbjct: 269 VSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGF 328
Query: 169 MPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
M + N S ++D + K +D A + D+MS ++++ W +I+G R EA
Sbjct: 329 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 388
Query: 225 RELFYRMPDYDKNV-------------------------------------FVVTAMITG 247
+FY + V VV +I
Sbjct: 389 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 448
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K L +A +FE D ++ +MI +Q E A++LF M++ ++PD L
Sbjct: 449 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
S+ AC++L +G+Q H +I+ F ++ NA++ Y++CG I D+ELAF +
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+VSW+ +I AQHGH ++AL F +M G +P+ IT S+L AC HAG V+E+
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
F M +++GI + EHY+C++D+L RAG+L+ A ++ MPF+A+ VWG+LL A ++
Sbjct: 629 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHK 688
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
+ ELG+LAA+K+ L+P+ S +V+L+N YA++GMW +V +VR LMK+ + K+ A SW+
Sbjct: 689 DPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWV 748
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHLEL 573
E+ +KVH F+ GD SHP +I+ +L
Sbjct: 749 EVKDKVHTFIVGDKSHPMTKEIYSKL 774
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 215/449 (47%), Gaps = 19/449 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQM-TTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
VFV NA ++ G + AR++FD+ + ++ ++WN +++ Y +N ++ +F M
Sbjct: 135 VFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194
Query: 109 VKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRL 159
I ++C++ C + I DA AM E++ T NA++ ++K GR+
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNI-DAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 253
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
+ A+ +FE+MP +V+S+ A++ G + G +A L M +V M++ +K
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 313
Query: 220 RFCEAREL------FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
A +L F + D + ++ ++ + K L++A +F+ + +D + +N
Sbjct: 314 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWN 373
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
A+I+G + G +EA +F G+ K + + TL +V + ++L+ + RQ H L +
Sbjct: 374 ALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKI 433
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GF + V N +I Y +C + D+ F + S ++++ ++I A +Q H E A+ F
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLF 493
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M G +PD SLL+AC + + ++K + + LV ++
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAK 552
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G +E A +P E W +++
Sbjct: 553 CGSIEDAELAFSSLP-ERGVVSWSAMIGG 580
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 165/343 (48%), Gaps = 10/343 (2%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +IS + K R A R+F+++P +S+++++ + G A M + V
Sbjct: 41 NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 207 SWTV---MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
++ V + + + +VFV A++ + G +++AR +F+
Sbjct: 101 CNEFALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDE 160
Query: 264 I-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
++ VS+N +++ Y +N +A+++F M+ +QP + V AC+ + ++
Sbjct: 161 AGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDA 220
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GRQ H +V+R G+E +V NA++ MY + G + + + F ++ ++VSWN +I+
Sbjct: 221 GRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+GH +A+ QM +G P+ S+L AC AG + + M+K S+
Sbjct: 281 NGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA---DSD 337
Query: 443 HY--TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
Y LVD+ ++ L+ A ++ M D +W +L++ C
Sbjct: 338 DYIGVGLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGC 379
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
T+ T +A Q L G H ++++GF A S+ N +I+ YS+C + F +
Sbjct: 5 GTISQQLTRYAAAQALLPGAHLHANLLKSGFLA--SLRNHLISFYSKCRRPCCARRVFDE 62
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
I P VSW++++ A++ +G A+ F M G
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG 98
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/566 (31%), Positives = 299/566 (52%), Gaps = 49/566 (8%)
Query: 57 ISALSRAGKISAARQLFDQMT----TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
++A + + I A RQ+ + KDV T NA++ Y + G + + +F+ MP ++
Sbjct: 116 VNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDV 175
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH----GRLEEATRLFEQ 168
VSWN +I+GC+ N A + M M+S LK G + ++
Sbjct: 176 VSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGF 235
Query: 169 MPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
M + N S ++D + K +D A + D+MS ++++ W +I+G R EA
Sbjct: 236 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 295
Query: 225 RELFYRMPDYDKNV-------------------------------------FVVTAMITG 247
+FY + V VV +I
Sbjct: 296 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 355
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K L +A +FE D ++ +MI +Q E A++LF M++ ++PD L
Sbjct: 356 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 415
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
S+ AC++L +G+Q H +I+ F ++ NA++ Y++CG I D+ELAF +
Sbjct: 416 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 475
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+VSW+ +I AQHGH ++AL F +M G +P+ IT S+L AC HAG V+E+
Sbjct: 476 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 535
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
F M +++GI + EHY+C++D+L RAG+L+ A ++ MPF+A+ VWG+LL A ++
Sbjct: 536 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHK 595
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
+ ELG+LAA+K+ L+P+ S +V+L+N YA++GMW +V +VR LMK+ + K+ A SW+
Sbjct: 596 DPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWV 655
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHLEL 573
E+ +KVH F+ GD SHP +I+ +L
Sbjct: 656 EVKDKVHTFIVGDKSHPMTKEIYSKL 681
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 193/382 (50%), Gaps = 17/382 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQM-TTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
VFV NA ++ G + AR++FD+ + ++ ++WN +++ Y +N ++ +F M
Sbjct: 42 VFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 101
Query: 109 VKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRL 159
I ++C++ C + I DA AM E++ T NA++ ++K GR+
Sbjct: 102 WSGIQPTEFGFSCVVNACTGSRNI-DAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 160
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
+ A+ +FE+MP +V+S+ A++ G + G +A L M +V M++ +K
Sbjct: 161 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 220
Query: 220 RFCEAREL------FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
A +L F + D + ++ ++ + K L++A +F+ + +D + +N
Sbjct: 221 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWN 280
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
A+I+G + G +EA +F G+ K + + TL +V + ++L+ + RQ H L +
Sbjct: 281 ALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKI 340
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GF + V N +I Y +C + D+ F + S ++++ ++I A +Q H E A+ F
Sbjct: 341 GFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLF 400
Query: 394 SQMGLNGFDPDGITFLSLLSAC 415
+M G +PD SLL+AC
Sbjct: 401 MEMLRKGLEPDPFVLSSLLNAC 422
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 132/253 (52%), Gaps = 7/253 (2%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERI-QPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+ +VFV A++ + G +++AR +F+ ++ VS+N +++ Y +N +A+++F
Sbjct: 38 FGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVF 97
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M+ +QP + V AC+ + ++ GRQ H +V+R G+E +V NA++ MY +
Sbjct: 98 GEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKM 157
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + + + F ++ ++VSWN +I+ +GH +A+ QM +G P+ S+L
Sbjct: 158 GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSIL 217
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHY--TCLVDILSRAGQLEKAWQITQGMPFE 470
AC AG + + M+K S+ Y LVD+ ++ L+ A ++ M
Sbjct: 218 KACAGAGAFDLGRQIHGFMIKANA---DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR 274
Query: 471 ADTGVWGSLLAAC 483
D +W +L++ C
Sbjct: 275 -DLILWNALISGC 286
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 50/323 (15%)
Query: 176 SYTAMLDGFMKKGEVDKARALSDYM-SFKNVVSWTVMITGYVKNERFCEARELFYRMP-- 232
+ AM GF G +D AR + D S +N VSW +++ YVKN++ +A ++F M
Sbjct: 47 ALVAMYGGF---GFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 103
Query: 233 -----------------------------------DYDKNVFVVTAMITGFCKVGMLENA 257
Y+K+VF A++ + K+G ++ A
Sbjct: 104 GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIA 163
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
++FE++ D VS+NA+I+G NG A+ L M + P+ L S+ AC+
Sbjct: 164 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGA 223
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
+ GRQ H +I+ +++ + ++ MY++ + D+ F + +L+ WN +I
Sbjct: 224 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALI 283
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK---- 433
+ + G +++A F + G + T ++L + + + + L K
Sbjct: 284 SGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFI 343
Query: 434 -----VYGIIPSSEHYTCLVDIL 451
V G+I S +CL D +
Sbjct: 344 FDAHVVNGLIDSYWKCSCLSDAI 366
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFA 381
G Q H + + GF ++V V NA++ MY G + D+ F + S N VSWN +++A+
Sbjct: 26 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 85
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
++ A+ F +M +G P F +++AC + ++ + ++V++ G
Sbjct: 86 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRM-GYEKDV 144
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN----VELGELAAK 497
LVD+ + G+++ A I + MP ++D W +L++ CV+N + +EL L
Sbjct: 145 FTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGHDHRAIEL--LLQM 201
Query: 498 KMRELDPQNSAVYVMLSNLYAAAG 521
K L P V+++ S L A AG
Sbjct: 202 KSSGLVPN---VFMLSSILKACAG 222
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/647 (30%), Positives = 322/647 (49%), Gaps = 115/647 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A I + G + ARQ+FD M +D + WN ++ GY + G + + LF M
Sbjct: 181 MFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRA 240
Query: 110 K----NIVSWNCMIA-GCIDNDR----------------------------------IDD 130
N + C ++ ++D +DD
Sbjct: 241 SGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDD 300
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR------------------- 171
+ F MP + T+N MISG +++G +++A LF M +
Sbjct: 301 GWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTD 360
Query: 172 ---------------RNVIS-----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
RN + +A++D + K V A+++ D +VV + M
Sbjct: 361 LNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTM 420
Query: 212 ITGYVKNERFCEARELFYRMPD-------------------------------------Y 234
I+GYV N EA ++F + + Y
Sbjct: 421 ISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY 480
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ +V +A++ + K G L+ + +F +I KD V++N+MI+ +AQNG EEAL LF
Sbjct: 481 EGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFRE 540
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M ++ + T+ SV +AC++L + G++ H +VI+ A++ +A+I MY +CG
Sbjct: 541 MCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGN 600
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F + N VSWN+IIA++ +G ++++ M GF D +TFL+L+SA
Sbjct: 601 LEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSA 660
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C HAG+V E + LF M + Y I P EH+ C+VD+ SRAG+L+KA ++ MPF+ D G
Sbjct: 661 CAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAG 720
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+WG+LL AC ++ NVEL E+A++++ +LDP NS YV++SN+ A AG W V++VR LMK
Sbjct: 721 IWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMK 780
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+ V K YSW+++ N H F+ D SHP + I++ LK ++++
Sbjct: 781 DTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELR 827
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 19/307 (6%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNV---ISYTAMLDGFMKKGEVDKA----- 193
+TA ++ ++ R +A +F +PR + + ++ G G+ A
Sbjct: 74 DTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYL 133
Query: 194 -------RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
L D +F VV + G + R R D ++FV +A+I
Sbjct: 134 KMWAHPSAPLPDSHTFPYVVK-SCAALGAIALGRLVHRTA---RTLGLDGDMFVGSALIK 189
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ G+L +AR +F+ + +DCV +N M+ GY + G A+ LF M +P+ AT
Sbjct: 190 MYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFAT 249
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
L + + L G Q H L ++ G E+ V+V N +++MY++C + D F +
Sbjct: 250 LACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP 309
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+LV+WN +I+ Q+G ++AL+ F M +G PD +T +SLL A N+ +
Sbjct: 310 RDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKE 369
Query: 427 LFELMVK 433
L +V+
Sbjct: 370 LHGYIVR 376
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 4/219 (1%)
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP--DDATLVSVFTACSALQLLNEGRQSH 327
+ +N +I G G AL + M P D T V +C+AL + GR H
Sbjct: 110 LPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVH 169
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
G + ++ V +A+I MY+ G + D+ F + + V WN ++ + + G
Sbjct: 170 RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVS 229
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
A+ F M +G +P+ T LS + + L L VK YG+ L
Sbjct: 230 SAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVK-YGLESEVAVANTL 288
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
V + ++ L+ W++ MP + D W +++ CV N
Sbjct: 289 VSMYAKCKCLDDGWKLFGLMPRD-DLVTWNGMISGCVQN 326
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 190/562 (33%), Positives = 295/562 (52%), Gaps = 51/562 (9%)
Query: 59 ALSRAGKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMP----VKNI 112
ALS + +S A LF + + ++ WN +I + S +LF M N
Sbjct: 68 ALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNS 127
Query: 113 VSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
++ + C + +A + + + ++I + + G L A +F++
Sbjct: 128 HTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDK 187
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
R+ +S+TA++ G++ +G VD AR L D + K+VVSW MI GYV++ RF EA F
Sbjct: 188 STLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACF 247
Query: 229 YRMPDYD-------------------------------------KNVFVVTAMITGFCKV 251
RM + D KN+ +V A++ + K
Sbjct: 248 TRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKC 307
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G + AR LF+ ++ KD + +N MI GY + EEAL LF M++ ++ P+D T ++V
Sbjct: 308 GEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVL 367
Query: 312 TACSALQLLNEGRQSHVLVIRN----GFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
AC++L L+ G+ H + +N G NVS+ ++I MY++CG + +E FR + S
Sbjct: 368 PACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGS 427
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+L SWN +I+ A +GH E+AL F +M GF PD ITF+ +LSAC AG V
Sbjct: 428 RSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRY 487
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
F M K YGI P +HY C++D+L+R+G+ ++A + M E D +WGSLL AC I+
Sbjct: 488 FSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHG 547
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
VE GE A+++ EL+P+NS YV+LSN+YA AG W DV ++R + ++G+ K + I
Sbjct: 548 QVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSI 607
Query: 548 EIGNKVHYFLGGDMSHPCIDKI 569
EI VH FL GD HP + I
Sbjct: 608 EIDGVVHEFLVGDKFHPQSENI 629
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 208/465 (44%), Gaps = 92/465 (19%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V+ + I S+ G++ AR +FD+ T +D +++ A+ITGY G + +++ LF +P K+
Sbjct: 164 VHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKD 223
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK---HGRLEEATRLFEQ 168
+VSWN MIAG + + R ++A F M E + + + + L H R E +
Sbjct: 224 VVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGS 283
Query: 169 MPR-----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
R +N+ A++D + K GE+ AR L D M K+V+ W MI GY + E
Sbjct: 284 WVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEE 343
Query: 224 ARELFYRM------PD--------------------------YDK---------NVFVVT 242
A LF M P+ DK NV + T
Sbjct: 344 ALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWT 403
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A +F + + S+NAMI+G A NG AE AL LF MI QP
Sbjct: 404 SIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQP 463
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD T V V +AC+ + GF V + + + ++ GI
Sbjct: 464 DDITFVGVLSACT----------------QAGF---VELGHRYFSSMNKDYGI------- 497
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
SP L + +I A+ G +++A + M + +PDG + SLL+AC G+V
Sbjct: 498 ----SPKLQHYGCMIDLLARSGKFDEAKVLMGNMEM---EPDGAIWGSLLNACRIHGQVE 550
Query: 423 ----ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ LFEL + G Y L +I + AG+ + +I
Sbjct: 551 FGEYVAERLFELEPENSGA------YVLLSNIYAGAGRWDDVAKI 589
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 143/325 (44%), Gaps = 45/325 (13%)
Query: 237 NVFVVTAMITGFCKVGM---LENARLLFERI--QPKDCVSFNAMIAGYAQNGVAEEALRL 291
N + + FC + L A LF I QP + +N +I ++ +L L
Sbjct: 55 NTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHL 114
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
FS M+ + P+ T S+F +C+ + +E +Q H ++ + V ++I MYS+
Sbjct: 115 FSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQ 174
Query: 352 CGGILDSELA-------------------------------FRQIHSPNLVSWNTIIAAF 380
G + + L F +I + ++VSWN +IA +
Sbjct: 175 VGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGY 234
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM---VKVYGI 437
Q G +E+AL F++M P+ T +S+LSACGH S++L + + V+ G
Sbjct: 235 VQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHL----RSLELGKWIGSWVRDRGF 290
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA-CVINLNVELGELAA 496
+ + LVD+ S+ G++ A ++ GM + D +W +++ C ++L E L
Sbjct: 291 GKNLQLVNALVDMYSKCGEIGTARKLFDGME-DKDVILWNTMIGGYCHLSLYEEALVLFE 349
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAG 521
+RE N ++ + A+ G
Sbjct: 350 VMLRENVTPNDVTFLAVLPACASLG 374
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 315/586 (53%), Gaps = 26/586 (4%)
Query: 17 FPPILRILSTPDSCGNFTPHSSN--CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
FPPIL+ +C + C+ ++ VFV + + SR G + A ++F
Sbjct: 127 FPPILK------ACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFV 180
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI-----DNDRID 129
M KDV +WNA+I+G+ QNG + + M + + +A + +D I+
Sbjct: 181 DMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240
Query: 130 DAFDYFQAMP---ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
+ + + + NA+I+ + K GRL++A +F+QM R+++S+ +++ + +
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300
Query: 187 KGEVDKARALSDYMSFK-------NVVSWTVMITGYVKNERFCEARELFY-RMPDYDKNV 238
+ A M VVS T + + + ++R + F R DK+V
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFS-QLSDQRISRSILGFVIRREWLDKDV 359
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK- 297
+ A++ + K+G + A +F+++ KD +S+N ++ GY QNG+A EA+ ++ M +
Sbjct: 360 VIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEEC 419
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
D P+ T VS+ A S + L +G + H +I+N +V V +I +Y +CG + D
Sbjct: 420 RDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLED 479
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F +I V WN IIA+ HG E+AL F M D ITF+SLLSAC H
Sbjct: 480 AMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH 539
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
+G V+E F++M K YGI PS +HY C+VD+L RAG LEKA+++ + MP + D +WG
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+LL+AC I N ELG LA+ ++ E+D +N YV+LSN+YA W V +VR L +++G
Sbjct: 600 ALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRG 659
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+ K +S + +G+K F G+ +HP +I+ ELK S +MKS+
Sbjct: 660 LRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSL 705
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 178/361 (49%), Gaps = 24/361 (6%)
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA------- 193
+N +I+ ++ HG + + F+ + ++N+ S+ +++ +++ G+ +A
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 194 -------RALSDYMSFKNVVSWTV-MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
D+ +F ++ V ++ G K C ++M ++ +VFV +++
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSLVDG--KKVHCC-----VFKM-GFEDDVFVAASLV 163
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ + G+L+ A +F + KD S+NAMI+G+ QNG A AL + + M ++ D
Sbjct: 164 HLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTI 223
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T+ S+ C+ + G H+ V+++G +++V V NA+I MYS+ G + D+++ F Q+
Sbjct: 224 TVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQM 283
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+LVSWN+IIAA+ Q+ AL FF M L G PD +T +SL S S
Sbjct: 284 EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISR 343
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
+ +++ + LV++ ++ G + A + +P DT W +L+
Sbjct: 344 SILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTISWNTLVTGYTQ 402
Query: 486 N 486
N
Sbjct: 403 N 403
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 18/192 (9%)
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
DA ++F +C + N ++ H L++ G N+ + +I +Y G I S F
Sbjct: 22 DADFNALFNSCVNV---NATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKAL----IFFSQMGLNGFDPDGITFLSLLSACGH-- 417
IH N+ SWN+II+A+ + G Y +A+ FS G PD TF +L AC
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV 138
Query: 418 -AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
KV+ +F++ + + +S LV + SR G L+ A ++ MP + D G W
Sbjct: 139 DGKKVHCC--VFKMGFEDDVFVAAS-----LVHLYSRYGVLDVAHKVFVDMPVK-DVGSW 190
Query: 477 GSLLAACVINLN 488
++++ N N
Sbjct: 191 NAMISGFCQNGN 202
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/554 (33%), Positives = 304/554 (54%), Gaps = 28/554 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF----------LQE 99
+F A ++ ++ +I A ++F++M +D+++WN ++ GY QNGF +QE
Sbjct: 177 LFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQE 236
Query: 100 SKNLFQSMPVKNIVSW-----NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL 154
+ S+ + +++ I I F+Y N AT AM+ +
Sbjct: 237 AGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMV-----NVAT--AMLDTYF 289
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
K G + A +F+ M RNV+S+ M+DG+ + GE ++A A M + V V + G
Sbjct: 290 KCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMG 349
Query: 215 YVK---NERFCEARELFYRMPDYDK---NVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+ N E +R+ D K +V V+ ++I+ + K ++ A +F ++ K
Sbjct: 350 ALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKT 409
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
V++NAMI GYAQNG EAL LF M D++PD TLVSV TA + L + + + H
Sbjct: 410 VVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHG 469
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
L IR + NV VC A+I +++CG I + F + ++++WN +I + +GH +
Sbjct: 470 LAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGRE 529
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL F++M P+ ITFLS+++AC H+G V E M FE M + YG+ P+ +HY +V
Sbjct: 530 ALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMV 589
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
D+L RAG+L+ AW+ Q MP + V G++L AC I+ NVELGE A ++ +LDP +
Sbjct: 590 DLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGG 649
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDK 568
+V+L+N+YA+A MW V RVR M+++G+ K S +E+ N+VH F G +HP +
Sbjct: 650 YHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKR 709
Query: 569 IHLELKRASVQMKS 582
I+ L+ +MK+
Sbjct: 710 IYAYLETLGDEMKA 723
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 151/289 (52%), Gaps = 6/289 (2%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV-- 206
+IS F K + EA R+FE + + + Y ML G+ K + A + M V+
Sbjct: 82 LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPV 141
Query: 207 --SWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
+T ++ +N RE+ + + N+F +TA++ + K +E+A +FE
Sbjct: 142 VYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFE 201
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
R+ +D VS+N ++AGYAQNG A A+++ M + +PD TLVSV A + L+ L
Sbjct: 202 RMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRI 261
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GR H R GFE V+V A++ Y +CG + + L F+ + S N+VSWNT+I +AQ
Sbjct: 262 GRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQ 321
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+G E+A F +M G +P ++ + L AC + G + + L+
Sbjct: 322 NGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLL 370
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 218/446 (48%), Gaps = 42/446 (9%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F +++F IS + I+ A ++F+ + K + ++ ++ GY +N L+++ +
Sbjct: 72 FYNEHLF-QTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFY 130
Query: 105 QSM------PVKNIVSWNCMIAG-CIDNDR--------IDDAFDYFQAMPERNTATYNAM 149
+ M PV ++ ++G +D R I + F + N A+
Sbjct: 131 ERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGF-------QSNLFAMTAV 183
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG----------EVDKARALSDY 199
++ + K ++E+A ++FE+MP+R+++S+ ++ G+ + G ++ +A D
Sbjct: 184 VNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDS 243
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
++ +V+ +K R + + ++ V V TAM+ + K G + +ARL
Sbjct: 244 ITLVSVLP----AVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARL 299
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F+ + ++ VS+N MI GYAQNG +EEA F M+ ++P + +++ AC+ L
Sbjct: 300 VFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGD 359
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L GR H L+ +VSV N++I+MYS+C + + F + +V+WN +I
Sbjct: 360 LERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILG 419
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+AQ+G +AL F +M + PD T +S+++A ++ + L ++ +
Sbjct: 420 YAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRT---LM 476
Query: 440 SSEHYTC--LVDILSRAGQLEKAWQI 463
+ C L+D ++ G ++ A ++
Sbjct: 477 DKNVFVCTALIDTHAKCGAIQTARKL 502
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 154/317 (48%), Gaps = 37/317 (11%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y++++F T +I+ FCK + A +FE ++ K V ++ M+ GYA+N +A+R +
Sbjct: 73 YNEHLFQ-TKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYE 131
Query: 294 GMIKMDMQPDDATLVSVFTACSALQL------LNEGRQSHVLVIRNGFEANVSVCNAVIT 347
M ++ P V+ LQL L GR+ H +VI NGF++N+ AV+
Sbjct: 132 RMRCDEVMP------VVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVN 185
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
+Y++C I D+ F ++ +LVSWNT++A +AQ+G +A+ QM G PD IT
Sbjct: 186 LYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSIT 245
Query: 408 FLSLLSACG--HAGKVNESMD------LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
+S+L A A ++ S+ FE MV V T ++D + G +
Sbjct: 246 LVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNV---------ATAMLDTYFKCGSVRS 296
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE--LDPQNSAVYVMLSNLY 517
A + +GM + W +++ N E KM + ++P N + M+ L+
Sbjct: 297 ARLVFKGMS-SRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVS---MMGALH 352
Query: 518 AAAGMWRDVTRVRLLMK 534
A A + D+ R R + +
Sbjct: 353 ACANLG-DLERGRYVHR 368
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR + VFV A I ++ G I AR+LFD M + VITWNA+I GY NG +E+
Sbjct: 472 IRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREAL 531
Query: 102 NLFQSM---PVK-NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISG 152
+LF M VK N +++ +IA C + +++ YF++M E Y AM+
Sbjct: 532 DLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDL 591
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
+ GRL++A + + MP + I+ + G
Sbjct: 592 LGRAGRLDDAWKFIQDMPVKPGITVLGAMLG 622
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C++L+ L+ Q L+I+NGF +I+++ + I ++ F + V +
Sbjct: 54 CTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLY 110
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL-----F 428
+T++ +A++ A+ F+ +M + P F LL G E++DL
Sbjct: 111 HTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSG------ENLDLRRGREI 164
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
MV G + T +V++ ++ Q+E A+++ + MP + D W +++A N
Sbjct: 165 HGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP-QRDLVSWNTVVAGYAQN 221
>gi|345505232|gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
Length = 579
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/473 (37%), Positives = 267/473 (56%), Gaps = 23/473 (4%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA 148
TG W + FLQ NC+I + + A F MP+R++ +YN+
Sbjct: 116 TGLWSDLFLQ-----------------NCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNS 158
Query: 149 MISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNV 205
MI G++K G +E A+ LF+ MPR +N+IS+ +++ G+ + E VD A L M K++
Sbjct: 159 MIDGYVKCGSIESASELFDLMPREMKNLISWNSLISGYAQTSEGVDIASKLFAEMPEKDL 218
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+SW MI GYVK+ R +A++LF +P D V MI G+ K+G + A+ LF+++
Sbjct: 219 ISWNSMIDGYVKHGRIEDAKDLFDMVPRRD--VVTWATMIDGYAKLGFVHQAKTLFDQMP 276
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGR 324
+D V++N+M+AGY QN EAL +FS M K + PD+ TLV V +A + L L++
Sbjct: 277 HRDVVAYNSMMAGYVQNRFHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAM 336
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H+ ++ F + A+I MYS+CG I + L F I + ++ WN +I A HG
Sbjct: 337 DMHLYIVEKQFLLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 396
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P +HY
Sbjct: 397 LGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 456
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+VDILSR+G +E A + + MP E + +W + L AC + E GEL AK +
Sbjct: 457 GCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAD 516
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ GMW+DV RVR +MKE+ + K SWIE+ VH F
Sbjct: 517 YNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGXVHEFF 569
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 214/412 (51%), Gaps = 50/412 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + ARQ+FD+M +D +++N++I GY + G ++ + LF MP
Sbjct: 122 LFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASELFDLMPR 181
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+KN++SWN +I+G ++ +D A F MPE++ ++N+MI G++KHGR+E+A LF
Sbjct: 182 EMKNLISWNSLISGYAQTSEGVDIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLF 241
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ +PRR+V+++ M+DG+ K G V +A+ L D M ++VV++ M+ GYV+N EA E
Sbjct: 242 DMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEALE 301
Query: 227 LFYRM-------PD--------------------YDKNVFVV-----------TAMITGF 248
+F M PD D ++++V A+I +
Sbjct: 302 IFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDMY 361
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G +++A L+FE I+ K +NAMI G A +G+ E A + + + ++PDD T V
Sbjct: 362 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFV 421
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SR G I ELA I
Sbjct: 422 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSI---ELAKNLIEE 478
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFLSLLSA 414
PN V W T + A + H +E + + L ++P LS + A
Sbjct: 479 MPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQADYNPSSYVLLSNMYA 530
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 144/325 (44%), Gaps = 54/325 (16%)
Query: 236 KNVFVVTAMITGFC---KVGMLENARLLFERI----QPKDCVSFNAMIAGYAQNGVAEEA 288
KN + T ++ F + + E AR +F + +D +NAMI ++ A
Sbjct: 12 KNSNLTTRIVLAFAASPRPYLAEFARFVFHEYHYGGEVEDPYLWNAMIKSHSHGTDPRRA 71
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
L LF M+++ + D +L V ACS L + G Q H + + G +++ + N +I +
Sbjct: 72 LLLFCLMLEIGVPVDKFSLSLVMKACSRLGFVKGGLQIHGFLKKTGLWSDLFLQNCLIGL 131
Query: 349 YSRCG---------------------GILDSELAFRQIHS------------PNLVSWNT 375
Y +CG ++D + I S NL+SWN+
Sbjct: 132 YLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASELFDLMPREMKNLISWNS 191
Query: 376 IIAAFAQHGH-YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I+ +AQ + A F++M + D I++ S++ G++ ++ DLF+ MV
Sbjct: 192 LISGYAQTSEGVDIASKLFAEMP----EKDLISWNSMIDGYVKHGRIEDAKDLFD-MVPR 246
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGE 493
++ + ++D ++ G + +A + MP D + S++A V N ++E E
Sbjct: 247 RDVVT----WATMIDGYAKLGFVHQAKTLFDQMPHR-DVVAYNSMMAGYVQNRFHMEALE 301
Query: 494 LAAKKMRE--LDPQNSAVYVMLSNL 516
+ + +E L P + + ++LS +
Sbjct: 302 IFSDMEKESHLSPDETTLVIVLSAI 326
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 294/537 (54%), Gaps = 16/537 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
VFV ++ I S G I AR LFD+M +KD + WN ++ GY +NG + +F M
Sbjct: 182 VFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRR 241
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYN--AMISGFLKHGRL 159
N V++ C+++ C I+ + E ++ N A+I + K +
Sbjct: 242 TETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDV 301
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALSDYMSFKNVVSWTVMITGY 215
E A ++F+Q +++ TAM+ G++ G + A R L N V+ ++
Sbjct: 302 EMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPAC 361
Query: 216 VKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+EL + + + +V +A++ + K G L+ A F I KD V +N
Sbjct: 362 AGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWN 421
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+MI +QNG EEA+ LF M + D ++ + +AC+ L L+ G++ H ++R
Sbjct: 422 SMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG 481
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
F +++ +A+I MYS+CG + + F + N VSWN+IIAA+ HG + +L F
Sbjct: 482 AFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLF 541
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
M +G PD +TFL+++SACGHAG+V+E + F M + GI+ EHY C+VD+ R
Sbjct: 542 HGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGR 601
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
AG+L +A+ + MPF D GVWG+LL AC ++ NVEL E+A++ + +LDPQNS YV+L
Sbjct: 602 AGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLL 661
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
SN++A AG W V ++R LMKE+GV K SWI++ N H F+ D SHP +I+
Sbjct: 662 SNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 718
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 128/255 (50%), Gaps = 4/255 (1%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ +VFV +++I + + G + +AR LF+R+ KD V +N M+ GY +NG + A +F
Sbjct: 178 FELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFM 237
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN--AVITMYSR 351
M + + P+ T V + C++ ++N G Q H LV+ +G E + V N A+I +Y +
Sbjct: 238 EMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFK 297
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
C + + F Q ++V +I+ + +G AL F + + +T S+
Sbjct: 298 CRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASV 357
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L AC + +L ++K G S + ++D+ ++ G+L+ A Q G+ +
Sbjct: 358 LPACAGLAALTLGKELHGHILK-NGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS-DK 415
Query: 472 DTGVWGSLLAACVIN 486
D W S++ +C N
Sbjct: 416 DAVCWNSMITSCSQN 430
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N + T ++ + G +A+ +F +++ +N MI G+ G + AL + M+
Sbjct: 80 NGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKML 139
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
PD T V AC L + GR H + GFE +V V +++I YS G I
Sbjct: 140 GCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIH 199
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F ++ S + V WN ++ + ++G ++ A F +M +P+ +TF +LS C
Sbjct: 200 DARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA 259
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYT-CLVDILSRAGQLEKAWQI-TQGMPFEADTG 474
+N L L+V + S T L+DI + +E A +I Q P D
Sbjct: 260 SEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTP--VDIV 317
Query: 475 VWGSLLAACVIN 486
V ++++ V+N
Sbjct: 318 VCTAMISGYVLN 329
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 19/230 (8%)
Query: 296 IKMDMQPDDA---TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
++ + DD+ LVS+ C+ L++GRQ+H ++ NG N + ++ MY C
Sbjct: 35 LQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLC 94
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G LD++ F Q+ WN +I F G ++ AL+F+ +M G PD TF ++
Sbjct: 95 GAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVI 154
Query: 413 SACGHAGK------VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
ACG V++ + + V+ + SS L+ S G + A +
Sbjct: 155 KACGGLNSVALGRVVHDKIQFMGFELDVF--VGSS-----LIKFYSENGCIHDARYLFDR 207
Query: 467 MPFEADTGVWGSLLAACVINLNVELGELAAKKMR--ELDPQNSAVYVMLS 514
MP D +W +L V N + + +MR E +P + +LS
Sbjct: 208 MP-SKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLS 256
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 332/648 (51%), Gaps = 108/648 (16%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++ F + V+N ISA + G + AR LFD+M ++ ++W+A+I+G + G ++ES
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATY---------- 146
F+ P +N+VSW I+G + N +A F + E N T+
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 147 -------------------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
N++I+ L+ G ++ A R+F++M +R+V+S+TA+L
Sbjct: 198 GDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY- 234
D +++ G++ +AR + D M +N +SW+ MI Y ++ EA +LF +M P+
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317
Query: 235 ------------------------------DKNVFVVTAMITGFCKVGMLENARLLFERI 264
DK+VF+ +++I +CK G ++ RL+F+ I
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLI 377
Query: 265 QPKDCVSFNAMIAGYAQNG-------------------------------VAEEALRLFS 293
K+ V +N+M+ GY+ NG E+ L +F+
Sbjct: 378 LEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFN 437
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
++ P+ +T SV AC+++ L++G H +I+ G + ++ V A+ MY++CG
Sbjct: 438 TLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCG 497
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFLSLL 412
I S+ F ++ N +SW +I A+ G ++LI F +M P+ + LS+L
Sbjct: 498 DIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC H G V++ + F M KVYGI P +HYTC+VD+LSR+G+L +A + + +PF+ +
Sbjct: 558 FACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE 617
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
W +LL+ C + ++ E AKK+ +L NSA YV+LSN+YA+AG W DV+ +R L
Sbjct: 618 ANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKL 677
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
M+E+G+ K SW+E+ N+VH F D SH ++I+ L+ +M
Sbjct: 678 MREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEM 725
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 218/474 (45%), Gaps = 104/474 (21%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
K + Q+ + D++ N +I+ Y Q G L +++ LF MP +N VSW+ +I+G +
Sbjct: 71 KFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMK 130
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF----EQMPRRNVISYTAM 180
R++++ YF+ P +N ++ A ISGF+++G EA +LF E R N +++T++
Sbjct: 131 YGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSV 190
Query: 181 LD---------------------GF--------------MKKGEVDKARALSDYMSFKNV 205
+ GF ++ GE+D AR + D M ++V
Sbjct: 191 VRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDV 250
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
VSWT ++ YV+ EAR +F MP ++N +AMI
Sbjct: 251 VSWTAILDAYVETGDLREARRIFDEMP--ERNEISWSAMI-------------------- 288
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
A Y+Q+G AEEAL+LFS M++ +P+ + +A ++L+ L+ G
Sbjct: 289 -----------ARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGIN 337
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN----------- 374
H V + G + +V + +++I +Y +CG D L F I N+V WN
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGR 397
Query: 375 --------------------TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
TIIA + ++ EK L F+ + ++G P+ TF S+L A
Sbjct: 398 LEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCA 457
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
C +++ M++ ++K+ GI T L D+ ++ G + + Q+ + MP
Sbjct: 458 CASIASLDKGMNVHGKIIKL-GIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP 510
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 66/365 (18%)
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+L + E ++ ++ +++ M+ +++ G + +AR L D M +N VSW+ +I
Sbjct: 66 YLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALI 125
Query: 213 TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+G +K R E+ F R P +NV TA I+GF +
Sbjct: 126 SGLMKYGRVEESMWYFERNP--FQNVVSWTAAISGFVR---------------------- 161
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NG+ EAL+LF +++ ++P+D T SV AC L G LV++
Sbjct: 162 ---------NGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVK 212
Query: 333 NGFEANVSVCNAVITMYSRCG---------------------GILDSELA---------- 361
GFE +SV N++IT+ R G ILD+ +
Sbjct: 213 AGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRI 272
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F ++ N +SW+ +IA ++Q G+ E+AL FS+M GF P+ F LSA +
Sbjct: 273 FDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRAL 332
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ +++ + K+ GI + L+D+ + G+ + ++ + E + W S++
Sbjct: 333 SAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILEKNVVCWNSMVG 390
Query: 482 ACVIN 486
IN
Sbjct: 391 GYSIN 395
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT 89
CG P + L + V N+ + S G++ +LF+ + K+ ++W II
Sbjct: 364 CGK--PDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIA 421
Query: 90 GYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAM----PER 141
GY +N ++ +F ++ V N +++ ++ C +D + + +
Sbjct: 422 GYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQY 481
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ A+ + K G + + ++FE+MP +N IS+T M+ G + G
Sbjct: 482 DIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESG 528
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 190/584 (32%), Positives = 306/584 (52%), Gaps = 64/584 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
VFV NA ++ SR +S AR++FD+M+ DV++WN+II Y + G + + +F M
Sbjct: 162 VFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
Query: 109 ---------------------------------------VKNIVSWNCMIAGCIDNDRID 129
++N+ NC++ +D
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMD 281
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFM 185
+A F M ++ ++NAM++G+ + GR E+A RLFE+M + +V++++A + G+
Sbjct: 282 EANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYA 341
Query: 186 KKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNERFCEARELFYRMPDY------- 234
++G +A + M N V+ +++G +E+ Y
Sbjct: 342 QRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKN 401
Query: 235 ---DKNVFVVTAMITGFCKVGMLENARLLFERIQPK--DCVSFNAMIAGYAQNGVAEEAL 289
D+N+ V+ +I + K ++ AR +F+ + PK D V++ MI GY+Q+G A +AL
Sbjct: 402 GHGDENM-VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 290 RLFSGMIKMDMQ--PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA-NVSVCNAVI 346
L S M + D Q P+ T+ AC++L L G+Q H +RN A + V N +I
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLI 520
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MY++CG I D+ L F + + N V+W +++ + HG+ E+AL F +M GF DG+
Sbjct: 521 DMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGV 580
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
T L +L AC H+G +++ M+ F M V+G+ P EHY CLVD+L RAG+L A ++ +
Sbjct: 581 TLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEE 640
Query: 467 MPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
MP E VW + L+ C I+ VELGE AA+K+ EL + Y +LSNLYA AG W+DV
Sbjct: 641 MPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDV 700
Query: 527 TRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
TR+R LM+ +GV K+ SW+E F GD +HP +I+
Sbjct: 701 TRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIY 744
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 200/470 (42%), Gaps = 76/470 (16%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
++ +VF +IS++ R G+ + A L + +V NA++ Y + L +++ +F
Sbjct: 128 YTFPFVFKACGEISSV-RCGESAHALSLVTGFIS-NVFVGNALVAMYSRCRSLSDARKVF 185
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAMISGFLKHG 157
M V ++VSWN +I + A + F M P+ T L
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 158 RLEEATRLFEQMPR--RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
L + F +N+ ++D + K G +D+A + MS K+VVSW M+ GY
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ RF +A LF +M + E+I+ D V+++A
Sbjct: 306 SQIGRFEDAVRLFEKMQE----------------------------EKIK-MDVVTWSAA 336
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI---- 331
I+GYAQ G+ EAL + M+ ++P++ TL+SV + C+++ L G++ H I
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 332 ---RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP---NLVSWNTIIAAFAQHGH 385
+NG V N +I MY++C + + F + SP ++V+W +I ++QHG
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL-SPKERDVVTWTVMIGGYSQHGD 455
Query: 386 YEKALIFFSQMGLNGFD--PDGITFLSLLSACG-----------HAGKVNESMDLFELMV 432
KAL S+M P+ T L AC HA + + L V
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
CL+D+ ++ G + A + M + + W SL+
Sbjct: 516 S-----------NCLIDMYAKCGSISDARLVFDNMMAKNEV-TWTSLMTG 553
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 128/248 (51%), Gaps = 9/248 (3%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDC--VSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ + +I+ + VG L +A L R P D +N++I Y NG A + L LF M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+ PD+ T VF AC + + G +H L + GF +NV V NA++ MYSRC + D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSACG 416
+ F ++ ++VSWN+II ++A+ G + AL FS+M G PD IT +++L C
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 417 HAG--KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
G + + + F + + +I + CLVD+ ++ G +++A + M + D
Sbjct: 241 SLGTHSLGKQLHCFAVTSE---MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVV 296
Query: 475 VWGSLLAA 482
W +++A
Sbjct: 297 SWNAMVAG 304
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 220/519 (42%), Gaps = 107/519 (20%)
Query: 18 PPILRILSTPDSCGNFTPHSSNCLIRLFST-----QYVFVNNAKISALSRAGKISAARQL 72
P + +++ C + HS + F+ Q +FV N + ++ G + A +
Sbjct: 227 PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRI 128
F M+ KDV++WNA++ GY Q G +++ LF+ M + I V+W+ I+G
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 129 DDAFDYFQAM----PERNTATYNAMISGFLKHGRLEEATRLF---EQMP---RRNV---- 174
+A + M + N T +++SG G L + + P R+N
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDE 406
Query: 175 -ISYTAMLDGFMKKGEVDKARALSDYMSFK--NVVSWTVMITGYVKNERFCEARELFYRM 231
+ ++D + K +VD ARA+ D +S K +VV+WTVMI GY ++ +A EL M
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 232 PDYD----------------------------------KN------VFVVTAMITGFCKV 251
+ D +N +FV +I + K
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKC 526
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G + +ARL+F+ + K+ V++ +++ GY +G EEAL +F M ++ + D TL+ V
Sbjct: 527 GSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVL 586
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
ACS ++++G + N + T++ G+ SP
Sbjct: 587 YACSHSGMIDQGMEYF---------------NRMKTVF----GV-----------SPGPE 616
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ ++ + G AL +M + +P + +++ LS C GKV E +
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPM---EPPPVVWVAFLSCCRIHGKVELGEYAAEKI 673
Query: 432 VKVYGIIPSSEH---YTCLVDILSRAGQLEKAWQITQGM 467
++ +S H YT L ++ + AG+ + +I M
Sbjct: 674 TEL-----ASNHDGSYTLLSNLYANAGRWKDVTRIRSLM 707
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 153/316 (48%), Gaps = 19/316 (6%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRN--VISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
+IS ++ G L A L + P + V + +++ + G +K L M + +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM---HSL 121
Query: 207 SWT---------VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENA 257
SWT G + + R E+ + + NVFV A++ + + L +A
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSA 316
R +F+ + D VS+N++I YA+ G + AL +FS M + +PD+ TLV+V C++
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L + G+Q H + + N+ V N ++ MY++CG + ++ F + ++VSWN +
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
+A ++Q G +E A+ F +M D +T+ + +S G E++ + M+ G
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-G 360
Query: 437 IIPSSEHYTCLVDILS 452
I P+ L+ +LS
Sbjct: 361 IKPNE---VTLISVLS 373
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 313/595 (52%), Gaps = 49/595 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF----- 104
+F N+ I S+ G + A +LF +M +D ++WN +I+ Q+GF E+ N F
Sbjct: 180 LFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWN 239
Query: 105 -----QSMPVKNIVS---------WNCMI--------------AGC--IDN----DRIDD 130
SM +++S W + AGC ID R++
Sbjct: 240 QGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLES 299
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS----YTAMLDGFMK 186
A F + E N ++ ++I G + G EEA LF QM V S +L +
Sbjct: 300 ARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLS 359
Query: 187 KGEVDKARALSDYMSFKNVVS----WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
+ ++ L + + + S ++T Y K +A F MP D + T
Sbjct: 360 QKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRD--IISWT 417
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
AMIT F + G +E AR F+++ ++ +S+N+M+A Y Q G EE L+++ M++ ++
Sbjct: 418 AMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKT 477
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D T + +AC+ L +L G Q + GF +NVSV N+V+TMYSRCG I +++ F
Sbjct: 478 DWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMF 537
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
I NLVSWN ++A +AQ+G K + F +M G PD I+++S+LS C H+G V+
Sbjct: 538 SSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVS 597
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
E F M K +GI P SEH+ C+VD+L RAGQLE+A + MPF+ + +WG+LLAA
Sbjct: 598 EGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAA 657
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
C I+ N +L ELA K + ELD + Y +L+N+Y+ +G + VT VR LM+++GV K
Sbjct: 658 CRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNP 717
Query: 543 AYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSWSSFD 597
SWIE+ N+VH F D +HP I +H L+ +++ + ++ + S S +
Sbjct: 718 GCSWIEVDNRVHVFTVDDTNHPQIKDVHRMLEEIIKKIEEIKNYANVMNSGRSHN 772
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 228/496 (45%), Gaps = 86/496 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N ++ S G IS A ++F + +V +WN +I+G+ +G ++E++ LF+ MP
Sbjct: 39 IFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPE 98
Query: 110 KNIVSWNCMIAGCIDNDRID------DAFDYFQ------AMPER-----NTATYNAMISG 152
++ VSWN M++G N ++ + Y + E+ +T +++
Sbjct: 99 RDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDM 158
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
++K G ++ A ++F + P ++ + +M+ G+ K G V KA L M ++ VSW MI
Sbjct: 159 YIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMI 218
Query: 213 TGYVKNERFCEARELFYRM------PD--------------YD----------------- 235
+ ++ E F M P+ YD
Sbjct: 219 SILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPC 278
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+V+ +I + K G LE+AR +F+ + + VS+ ++I G AQ G EEAL LF+ M
Sbjct: 279 LDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQM 338
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++ + D TL +V C + + ++ G Q H I G +++V V NA++TMY++CG +
Sbjct: 339 REVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDV 398
Query: 356 LDSELAFR-------------------------------QIHSPNLVSWNTIIAAFAQHG 384
+ AF ++ N++SWN+++A + Q G
Sbjct: 399 WKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRG 458
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
++E+ L + QM G D ITF + +SAC + + K+ G +
Sbjct: 459 YWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKL-GFSSNVSVA 517
Query: 445 TCLVDILSRAGQLEKA 460
+V + SR GQ+E+A
Sbjct: 518 NSVVTMYSRCGQIEEA 533
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 216/477 (45%), Gaps = 25/477 (5%)
Query: 66 ISAARQLFDQMT----TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
I AR+L Q+ + N ++ Y G + ++ +F + N+ SWN MI+G
Sbjct: 20 IPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISG 79
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
D+ ++ +A F+ MPER++ ++N+M+SG+ +G LE + + + L
Sbjct: 80 FADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSL---GYLKLALQL 136
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
GF +K + + T ++ Y+K A+++F R P + ++F
Sbjct: 137 HGFAEKFDFGIDTCVE-----------TSVLDMYIKCGAMDFAQKVFCRTP--NPSLFCW 183
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
+MI G+ K G ++ A LF ++ +D VS+N MI+ +Q+G E L F M +
Sbjct: 184 NSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFR 243
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P+ T SV +AC+++ L G H ++R +V +I MY++CG + +
Sbjct: 244 PNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQV 303
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F + N VSW ++I AQ G E+AL+ F+QM D T ++L C +
Sbjct: 304 FDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDI 363
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ L + G+ S LV + ++ G + KA + MP D W +++
Sbjct: 364 SIGEQLHAHTI-TRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIR-DIISWTAMIT 421
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
A +VE KM E +N + + Y G W + +V + M +GV
Sbjct: 422 AFSQAGDVEKAREYFDKMPE---RNVISWNSMLATYMQRGYWEEGLKVYIQMLREGV 475
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 208/441 (47%), Gaps = 54/441 (12%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R+ V+ I ++ G++ +ARQ+FD +T + ++W ++I G Q GF +E+
Sbjct: 272 IVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEA 331
Query: 101 KNLFQSM---PV-KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISG 152
LF M PV + + ++ C+ I R + NA+++
Sbjct: 332 LVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTM 391
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+ K G + +A FE MP R++IS+TAM+ F + G+V+KAR D M +NV+SW M+
Sbjct: 392 YAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSML 451
Query: 213 TGYVKNERFCEARELFYRM-------------------------------------PDYD 235
Y++ + E +++ +M +
Sbjct: 452 ATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFS 511
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
NV V +++T + + G +E A+ +F I K+ VS+NAM+AGYAQNG + + +F M
Sbjct: 512 SNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKM 571
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS---VCNAVITMYSRC 352
+ + PD + VSV + CS ++EG+ + + ++ + +S VC ++ + R
Sbjct: 572 LNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVC--MVDLLGRA 629
Query: 353 GGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKA-LIFFSQMGLNGFDPDGITFLS 410
G + ++ Q+ PN W ++AA HG+ + A L + + L+ P L+
Sbjct: 630 GQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLA 689
Query: 411 LLSACGHAGKVNESMDLFELM 431
+ + +GK+ ++ +LM
Sbjct: 690 NIYS--ESGKIQGVTNVRKLM 708
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C++L+ + R+ H +I G ++++ + N ++ MYS CG I D+ F I PN+ SW
Sbjct: 14 CASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSW 73
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG------KVNESMDL 427
NT+I+ FA G +A F +M + D +++ S++S H G K + S+
Sbjct: 74 NTMISGFADSGQMREAEKLFEKMP----ERDSVSWNSMMSGYFHNGELEATIKASGSLGY 129
Query: 428 FELMVKVYG 436
+L ++++G
Sbjct: 130 LKLALQLHG 138
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 314/585 (53%), Gaps = 23/585 (3%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRL-FSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FPP++R P S C +RL VF + + + A R G+++ A ++FD+
Sbjct: 72 FPPLVRAAPGPASAAQL----HACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDE 127
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCID-NDRIDD 130
M +DV WNA+++G +N ++ L M + + V+ + ++ C+ DR
Sbjct: 128 MPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALA 187
Query: 131 AFDYFQAMPERNTATY---NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ A+ + NA+I + K G L EA +F M R+++++ +++ +
Sbjct: 188 LVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQG 247
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVK------NERFCEARELFYRMPDYD-KNVFV 240
G+V A L M V + + +E ++ + R +D ++
Sbjct: 248 GKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIA 307
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD- 299
AM+ + K+ ++ A+ +F+ + +D VS+N +I GY QNG+A EA+R+++ M +
Sbjct: 308 GNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEG 367
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++P T VSV A S L L +G + H L I+ G +V V +I +Y++CG ++++
Sbjct: 368 LKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAM 427
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + + WN IIA HGH KAL FSQM PD +TF+SLL+AC HAG
Sbjct: 428 FLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAG 487
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
V++ F+LM VYGI+P ++HYTC+VD+L RAGQL++A++ Q MP + D+ VWG+L
Sbjct: 488 LVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGAL 547
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
L AC I+ NVE+G++A++ + ELDP+N YV++SN+YA G W V VR L++ Q +
Sbjct: 548 LGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQ 607
Query: 540 KQCAYSWIEIGNKVHYFLGGDMS--HPCIDKIHLELKRASVQMKS 582
K +S +E+ V F G + HP ++I L +MKS
Sbjct: 608 KTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKS 652
>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 650
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/549 (33%), Positives = 288/549 (52%), Gaps = 52/549 (9%)
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF 132
FD + WN++++ Y + G + + N+F MPV++ VSWN MI+G + N D +F
Sbjct: 69 FDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSF 128
Query: 133 DYFQAMPERN-------TATYNAMISGF--LKHGRLEEATRLFEQMP-----RRNVISYT 178
+F+ M E N AT M+SG L+ G T++ + R +
Sbjct: 129 KFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGN 188
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------- 231
A++ + K + R + D M +NVV+WT +I+G +NE + ++ LF +M
Sbjct: 189 ALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVS 248
Query: 232 PDY-------------------------------DKNVFVVTAMITGFCKVGMLENARLL 260
P+ ++ + +A++ + K G L+ A +
Sbjct: 249 PNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQI 308
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
FE + D VS ++ +AQNG EEA+++F+ M+ + M+ D + +V L
Sbjct: 309 FESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYL 368
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
G+Q H L+I+ F N V N ++ MYS+CG + DS L F Q+ N VSWN++IAAF
Sbjct: 369 ALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAF 428
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A+HG KAL F+ +M + G P +TFLSLL AC HAG V + M+L E M +GI P
Sbjct: 429 ARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPR 488
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
SEHY C+VD+L RAG L +A + +G+P VW +LL AC I+ + E+G+ AA ++
Sbjct: 489 SEHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLF 548
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
P + A YV+++N+Y++ G W++ MKE GV K+ SWIEI KV+ F+ GD
Sbjct: 549 SAAPASPAPYVLMANIYSSEGNWKERASSIKRMKEMGVAKEVGISWIEIEKKVNSFVVGD 608
Query: 561 MSHPCIDKI 569
HP D I
Sbjct: 609 KLHPEADVI 617
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 294/561 (52%), Gaps = 48/561 (8%)
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
T A++ Y + +++S +F +M N+VSWN MI G ND DAFD F
Sbjct: 203 TSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLR 262
Query: 138 M------PERNTATYNAMISGFLK--HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
M P+ T A G L+ + E + E N + TA++D K G
Sbjct: 263 MMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGS 322
Query: 190 VDKARAL--SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------------ 235
+ +AR++ S +++ + W MI+GY+++ +A ELF +M D
Sbjct: 323 LQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVF 382
Query: 236 --------------------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
V + A+ + K G LE+ R +F R++ +D
Sbjct: 383 NAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDL 442
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+S+ +++ Y+Q ++A+ +FS M + P+ T SV +C+ L LL G+Q H +
Sbjct: 443 ISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGI 502
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ + G + + + +A++ MY++CG + D++ F +I + + VSW IIA AQHG + A
Sbjct: 503 ICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDA 562
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F +M G +P+ +TFL +L AC H G V E + F+LM K YG++P EHY C+VD
Sbjct: 563 LQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVD 622
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+LSR G L A + MP E + VW +LL AC ++ NVELGELAA+K+ +NSA
Sbjct: 623 LLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSAT 682
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
YV+LSN Y +G ++D +R LMKEQGV K+ SWI + +H F GD HP DKI
Sbjct: 683 YVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKI 742
Query: 570 HLELKRASVQMKSVDDFVEIA 590
+ +L+ +++ S+DD +++
Sbjct: 743 YAKLEELKLKLISLDDVPDLS 763
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 219/468 (46%), Gaps = 73/468 (15%)
Query: 59 ALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VS 114
A S+ I AA +LFDQM+ ++ +W +I G +NG + F M + I +
Sbjct: 114 AYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFA 173
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
++ ++ CI D I+ N +I GF H +
Sbjct: 174 YSGILQICIGLDSIELG----------NMVHAQIVIRGFTSHTFVS-------------- 209
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--- 231
TA+L+ + K E++ + + + M+ NVVSW MITG+ N+ + +A +LF RM
Sbjct: 210 ---TALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGE 266
Query: 232 ---PD-------------------------------YDKNVFVVTAMITGFCKVGMLENA 257
PD D N V TA+I K G L+ A
Sbjct: 267 GVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEA 326
Query: 258 RLLFER--IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
R +F I + +NAMI+GY ++G E+AL LF+ M + D+ D T SVF A +
Sbjct: 327 RSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIA 386
Query: 316 ALQLLNEGRQSHVLVIRNGFEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
AL+ L+ G++ H I++G E N VS+ NAV Y++CG + D F ++ +L+SW
Sbjct: 387 ALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWT 446
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+++ A++Q ++KA+ FS M G P+ TF S+L +C + + + ++ KV
Sbjct: 447 SLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKV 506
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G+ + LVD+ ++ G L A ++ + ADT W +++A
Sbjct: 507 -GLDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAG 552
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 175/358 (48%), Gaps = 23/358 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQ--MTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
V A I S+ G + AR +F+ +T + WNA+I+GY ++GF +++ LF M
Sbjct: 308 LVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMC 367
Query: 109 VKNIV--------SWNCMIA-GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+I +N + A C+ + A + + NA+ + + K G L
Sbjct: 368 QNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSL 427
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG-YVKN 218
E+ ++F +M R++IS+T+++ + + E DKA + M + + + V
Sbjct: 428 EDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSC 487
Query: 219 ERFC------EARELFYRMP-DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
C + + ++ D DK + +A++ + K G L +A+ +F RI D VS
Sbjct: 488 ANLCLLEYGQQVHGIICKVGLDMDK--CIESALVDMYAKCGCLGDAKKVFNRISNADTVS 545
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ A+IAG+AQ+G+ ++AL+LF M+++ ++P+ T + V ACS L+ EG Q L+
Sbjct: 546 WTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMK 605
Query: 332 RN-GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ G + ++ + SR G + D+ E R PN + W T++ A HG+ E
Sbjct: 606 KTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 195/479 (40%), Gaps = 101/479 (21%)
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD--- 233
+ K ++D A L D MS +N SWTV+I G +N F + E F M PD
Sbjct: 114 AYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFA 173
Query: 234 ----------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+ + FV TA++ + K+ +E++ +F +
Sbjct: 174 YSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT 233
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+ VS+NAMI G+ N + +A LF M+ + PD T + V A L+ +N+ ++
Sbjct: 234 EVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKE 293
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS------WNTIIAA 379
+ G ++N V A+I M S+CG + ++ R I + + ++ WN +I+
Sbjct: 294 VSGYALELGVDSNTLVGTALIDMNSKCGSLQEA----RSIFNSHFITCRFNAPWNAMISG 349
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG-----------HAGKVNESMDL- 427
+ + G EKAL F++M N D T+ S+ +A HA + +++
Sbjct: 350 YLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVN 409
Query: 428 -----------------FELMVKVYGIIPSSE--HYTCLVDILSRAGQLEKAWQITQGMP 468
E + KV+ + + +T LV S+ + +KA +I M
Sbjct: 410 YVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMR 469
Query: 469 FEA---DTGVWGSLLAACVINLNVELGE----LAAKKMRELDPQNSAVYVMLSNLYAAAG 521
E + + S+L +C +E G+ + K ++D + L ++YA G
Sbjct: 470 AEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDK---CIESALVDMYAKCG 526
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
D +V ++ SW I + G H +D L+L R VQ+
Sbjct: 527 CLGDAKKVF-----NRISNADTVSWTAI-------IAGHAQHGIVDDA-LQLFRRMVQL 572
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 106/236 (44%), Gaps = 12/236 (5%)
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC--NAVITMYSRCGGI 355
+ +QP LV + C + L + + H ++++ F + S+ N V YS+C I
Sbjct: 66 LQIQP----LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDI 121
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F Q+ N SW +IA A++G + FF +M G PD + +L C
Sbjct: 122 DAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQIC 181
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ E ++ + + G + T L+++ ++ ++E ++++ M E +
Sbjct: 182 IGLDSI-ELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT-EVNVVS 239
Query: 476 WGSLLAACVIN-LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
W +++ N L ++ +L + M E ++ ++ ++ A GM RDV + +
Sbjct: 240 WNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAK---AIGMLRDVNKAK 292
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
YV ++NA +A ++ G + R++F++M +D+I+W +++T Y Q ++ +F
Sbjct: 406 LEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIF 465
Query: 105 QSMPVKNIV----SWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISG 152
+M + I +++ ++ C + + +Y Q + + + +A++
Sbjct: 466 SNMRAEGIAPNQFTFSSVLVSCANLCLL----EYGQQVHGIICKVGLDMDKCIESALVDM 521
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
+ K G L +A ++F ++ + +S+TA++ G + G VD A L
Sbjct: 522 YAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQL 565
>gi|345505222|gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
Length = 597
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 180/478 (37%), Positives = 267/478 (55%), Gaps = 33/478 (6%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA-----GCIDNDRIDDAFDYFQAMPERNT 143
TG W + FLQ NC+I GC+ R F MP+R++
Sbjct: 134 TGLWSDLFLQ-----------------NCLIGLYLKCGCLGYSR-----QVFDRMPQRDS 171
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYM 200
+YN+MI G++K G +E A LF+ MP+ +N+IS+ ++ G+ + + V+ A L M
Sbjct: 172 VSYNSMIDGYVKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNIASKLFSEM 231
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
K+++SW MI GYVK+ R +A++LF MP D V MI G+ K+G + A+ L
Sbjct: 232 PEKDLISWNSMIDGYVKHGRIEDAKDLFDVMPRRD--VITWATMIDGYAKLGFIHQAKTL 289
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQL 319
F++I +D V++N+M+AGY QN EAL LF M K + PD+ TLV V +A + L
Sbjct: 290 FDQIPHRDVVAYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSAIAQLGR 349
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L++ H +++ F + A+I MYS+CG I + L F+ + + N+ WN II
Sbjct: 350 LSKAMDMHFYIVKKQFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNIDHWNAIIGG 409
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
A HG A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P
Sbjct: 410 LAIHGLGGPAFDMLLQIERLSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEP 469
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HY C+VDILSR+G +E A + + MP E + +W + L AC + E+GEL AK +
Sbjct: 470 RLQHYGCMVDILSRSGSIELAKILIEKMPIEPNDVIWRTFLTACSHHKEFEMGELVAKHL 529
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ GMW+DV RVR +MKE+ + K SWIE+ +VH F
Sbjct: 530 ILQAGYNPSSYVLLSNMYASCGMWKDVRRVRTMMKERKIQKIPGCSWIELDGRVHEFF 587
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 222/412 (53%), Gaps = 45/412 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + +RQ+FD+M +D +++N++I GY + G ++ ++ LF MP
Sbjct: 140 LFLQNCLIGLYLKCGCLGYSRQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPK 199
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+KN++SWNC+I+G +D ++ A F MPE++ ++N+MI G++KHGR+E+A LF
Sbjct: 200 EMKNLISWNCLISGYAQTSDGVNIASKLFSEMPEKDLISWNSMIDGYVKHGRIEDAKDLF 259
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ MPRR+VI++ M+DG+ K G + +A+ L D + ++VV++ M+ GYV+N+ EA E
Sbjct: 260 DVMPRRDVITWATMIDGYAKLGFIHQAKTLFDQIPHRDVVAYNSMMAGYVQNKYHMEALE 319
Query: 227 LFYRM-------PDYDKNVFVVT-------------------------------AMITGF 248
LF +M PD V V++ A+I +
Sbjct: 320 LFIKMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHFYIVKKQFFIGGKLGVALIDMY 379
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G +++A L+F+ ++ K+ +NA+I G A +G+ A + + ++ ++PDD T +
Sbjct: 380 SKCGSIQHAMLVFKGLENKNIDHWNAIIGGLAIHGLGGPAFDMLLQIERLSIKPDDITFI 439
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SR G I +++ ++
Sbjct: 440 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKILIEKMPI 499
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLS-LLSACG 416
PN V W T + A + H +E + + L G++P LS + ++CG
Sbjct: 500 EPNDVIWRTFLTACSHHKEFEMGELVAKHLILQAGYNPSSYVLLSNMYASCG 551
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 141/323 (43%), Gaps = 50/323 (15%)
Query: 236 KNVFVVTAMITGFC---KVGMLENARLLFERI--------QPKDCVSFNAMIAGYAQNGV 284
KN + T ++ F + + E AR +FE + +D +NA+I ++
Sbjct: 26 KNSNLTTRIVLAFASSRRQYLAEFARCVFEEHHVYSLPYGETEDPFLWNAVIKSHSHGTD 85
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
+L LF M++ + D +L V ACS L + G H + + G +++ + N
Sbjct: 86 PRRSLFLFCLMLENGVSVDKFSLSLVLKACSRLGFVKAGMXIHGFLRKTGLWSDLFLQNC 145
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG------- 397
+I +Y +CG + S F ++ + VS+N++I + + G E A F M
Sbjct: 146 LIGLYLKCGCLGYSRQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEMKNLI 205
Query: 398 -----LNGF------------------DPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
++G+ + D I++ S++ G++ ++ DLF++M +
Sbjct: 206 SWNCLISGYAQTSDGVNIASKLFSEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDVMPRR 265
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGE 493
I + ++D ++ G + +A + +P D + S++A V N ++E E
Sbjct: 266 DVIT-----WATMIDGYAKLGFIHQAKTLFDQIPHR-DVVAYNSMMAGYVQNKYHMEALE 319
Query: 494 LAAKKMRE--LDPQNSAVYVMLS 514
L K +E L P + + ++LS
Sbjct: 320 LFIKMEKESHLSPDETTLVIVLS 342
>gi|345505214|gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
Length = 612
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 270/475 (56%), Gaps = 23/475 (4%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY 146
I TG W + FLQ NC+I I + A F MP+R++ +Y
Sbjct: 155 IKTGTWSDLFLQ-----------------NCLIGLYIKCGCLGFARQVFDRMPQRDSVSY 197
Query: 147 NAMISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFK 203
N+MI G+LK G +E A LF MPR RN+I++ +M+ G+ ++ + V+ A L D M K
Sbjct: 198 NSMIDGYLKCGLVESAGELFGLMPREKRNLITWNSMIGGYAQRADGVNVAAKLFDEMPEK 257
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+++SW MI GYVK+ R +A+ LF MP D V MI G+ K+G++ A+ LF++
Sbjct: 258 DLISWNSMIGGYVKHGRIEDAKGLFDVMPRRD--VVTWAIMIDGYGKLGLVHEAKTLFDQ 315
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNE 322
+ +D V +N+M++G QN EAL +F+ M K + PD+ +LV V +A + L L++
Sbjct: 316 MPHRDVVVYNSMMSGXVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAXAQLGRLSK 375
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
H+ ++ F ++ + A+I MYS+CG I + F I S ++ WN +I A
Sbjct: 376 AIDMHLYIVEKQFPSSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAV 435
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P +
Sbjct: 436 HGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 495
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HY C+VDIL+R+G +E A + +GMP E + +W + L AC + E GEL AK +
Sbjct: 496 HYGCMVDILARSGSIELAKNLIEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQ 555
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ GMW+DV RVR +MKE+ + K SWIE+ +VH FL
Sbjct: 556 AGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWIELDGRVHEFL 610
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 213/421 (50%), Gaps = 50/421 (11%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LI+ + +F+ N I + G + ARQ+FD+M +D +++N++I GY + G ++ +
Sbjct: 154 LIKTGTWSDLFLQNCLIGLYIKCGCLGFARQVFDRMPQRDSVSYNSMIDGYLKCGLVESA 213
Query: 101 KNLFQSMP--VKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
LF MP +N+++WN MI G D ++ A F MPE++ ++N+MI G++KHG
Sbjct: 214 GELFGLMPREKRNLITWNSMIGGYAQRADGVNVAAKLFDEMPEKDLISWNSMIGGYVKHG 273
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
R+E+A LF+ MPRR+V+++ M+DG+ K G V +A+ L D M ++VV + M++G V+
Sbjct: 274 RIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHEAKTLFDQMPHRDVVVYNSMMSGXVQ 333
Query: 218 NERFCEARELFYRM-------PD--------------------YDKNVFVV--------- 241
N EA E+F M PD D ++++V
Sbjct: 334 NRYHMEALEVFNHMEKESHLTPDETSLVIVLSAXAQLGRLSKAIDMHLYIVEKQFPSSGK 393
Query: 242 --TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
A+I + K G +++A +FE I+ K +NAMI G A +G+ E A + + +
Sbjct: 394 LGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRS 453
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDS 358
++PD T V V ACS L+ EG L+ R + E + ++ + +R G I
Sbjct: 454 IKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSI--- 510
Query: 359 ELAFRQIHS----PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLS 413
ELA I PN V W T + A + H +E + + L G++P LS +
Sbjct: 511 ELAKNLIEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMY 570
Query: 414 A 414
A
Sbjct: 571 A 571
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 122/285 (42%), Gaps = 47/285 (16%)
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+D +N +I ++ +AL L M++ + D + ACS L + EG Q
Sbjct: 91 EDPFLWNVVIKSHSHGVDPRKALFLLCLMLENGVPVDKFSFSLALKACSRLGFVKEGTQV 150
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCG---------------------GILDSELAFRQI 365
H +I+ G +++ + N +I +Y +CG ++D L +
Sbjct: 151 HGFLIKTGTWSDLFLQNCLIGLYIKCGCLGFARQVFDRMPQRDSVSYNSMIDGYLKCGLV 210
Query: 366 HSP------------NLVSWNTIIAAFAQHGH-YEKALIFFSQMGLNGFDPDGITFLSLL 412
S NL++WN++I +AQ A F +M + D I++ S++
Sbjct: 211 ESAGELFGLMPREKRNLITWNSMIGGYAQRADGVNVAAKLFDEMP----EKDLISWNSMI 266
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
G++ ++ LF++M + + + ++D + G + +A + MP D
Sbjct: 267 GGYVKHGRIEDAKGLFDVMPRRDVVT-----WAIMIDGYGKLGLVHEAKTLFDQMPHR-D 320
Query: 473 TGVWGSLLAACVIN-LNVELGEL--AAKKMRELDPQNSAVYVMLS 514
V+ S+++ V N ++E E+ +K L P +++ ++LS
Sbjct: 321 VVVYNSMMSGXVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLS 365
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 292/557 (52%), Gaps = 71/557 (12%)
Query: 68 AARQLFD----QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
AA+Q+ D ++ N ++ Y + G LQE++ +F ++ K+ SWN MIAG +
Sbjct: 46 AAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYV 105
Query: 124 DNDRIDDAFDYFQAM----PERNTATY---------------NAMISGFLKHGRLEEATR 164
++ +DA F+ M + N TY + ++HG LE R
Sbjct: 106 EHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVR 165
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+ TA+L + K G +++AR + D + +++SWTVMI Y ++ EA
Sbjct: 166 VG-----------TALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEA 214
Query: 225 RELFYRMPD-------------------------------------YDKNVFVVTAMITG 247
L +M + +V V TA++
Sbjct: 215 YRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQM 274
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K G +++AR++F+R++ +D VS+N MI +A++G EA LF M +PD
Sbjct: 275 YAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMF 334
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
+S+ AC++ L ++ H + +G E +V V A++ MYS+ G I D+ + F ++
Sbjct: 335 LSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKV 394
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N+VSWN +I+ AQHG + AL F +M +G PD +TF+++LSAC HAG V+E
Sbjct: 395 RNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQ 454
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
+ M +VYGI P H C+VD+L RAG+L +A M + D WG+LL +C
Sbjct: 455 YLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYG 514
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
NVELGEL AK+ +LDP+N+A YV+LSN+YA AG W V+ VR +M+E+G+ K+ SWI
Sbjct: 515 NVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWI 574
Query: 548 EIGNKVHYFLGGDMSHP 564
E+ NK+H FL D SHP
Sbjct: 575 EVDNKIHDFLVADSSHP 591
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 9/247 (3%)
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
EA+ + ++ + D V V C + L +Q H +I++ E N V N ++
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
+Y CG + ++ F + + SWN +IA + +H H E A+ F +M G P+
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
T++ +L AC + ++ ++ G+ T L+ + + G + +A +I
Sbjct: 131 TYMIILKACASLSALKWGKEVHAC-IRHGGLESDVRVGTALLRMYGKCGSINEARRIFDN 189
Query: 467 MPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ----NSAVYVMLSNLYAAAGM 522
+ D W ++ A + N G+ A + M +++ + N+ YV + N A+ G
Sbjct: 190 L-MNHDIISWTVMIGAYAQSGN---GKEAYRLMLQMEQEGFKPNAITYVSILNACASEGA 245
Query: 523 WRDVTRV 529
+ V RV
Sbjct: 246 LKWVKRV 252
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 197/636 (30%), Positives = 312/636 (49%), Gaps = 115/636 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV NA I+ R G A ++F M +D +T+N +I+G+ Q G + + +F+ M
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237
Query: 110 KNI----VSWNCMIAGC--------------------IDNDRI---------------DD 130
+ V+ + ++A C I +D I +
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVET 297
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAML----- 181
A F + N +N M+ F + L ++ LF QM R N +Y +L
Sbjct: 298 ALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTC 357
Query: 182 ------------------------------DGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
D + K G ++KAR + + + K+VVSWT M
Sbjct: 358 TREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSM 417
Query: 212 ITGYVKNERFCEARELFYRM------PD-------------------------------Y 234
I GYV++E +A F M PD Y
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+V + A++ + + G + A FE I+ KD +++N +++G+AQ+G+ EEAL++F
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMR 537
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + ++ + T VS +A + L + +G+Q H VI+ G V NA+I++Y +CG
Sbjct: 538 MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGS 597
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
D+++ F ++ N VSWNTII + +QHG +AL F QM G P+ +TF+ +L+A
Sbjct: 598 FEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAA 657
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V E + F+ M YGI P +HY C++DI RAGQL++A + + MP AD
Sbjct: 658 CSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM 717
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VW +LL+AC ++ N+E+GE AAK + EL+P +SA YV+LSN YA W + +VR +M+
Sbjct: 718 VWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMR 777
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
++GV K+ SWIE+ N VH F GD HP ++I+
Sbjct: 778 DRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIY 813
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/551 (24%), Positives = 242/551 (43%), Gaps = 117/551 (21%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
+Y V N I S+ G + AR++F++++ +D ++W A+++GY QNG +E+ L++ M
Sbjct: 75 KYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQM 134
Query: 108 ------PVKNIVS---WNCMIAGCIDNDRIDDAFDY------------------------ 134
P ++S +C A R+ A Y
Sbjct: 135 HRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSF 194
Query: 135 ------FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP------------------ 170
F MP R+T T+N +ISG + G E A +FE+M
Sbjct: 195 RLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAAC 254
Query: 171 ---------------------RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+ I ++LD ++K G+V+ A + + NVV W
Sbjct: 255 ASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWN 314
Query: 210 VMITGYVKNERFCEARELFYRM------PD------------------------------ 233
+M+ + + ++ ELF +M P+
Sbjct: 315 LMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Query: 234 -YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
++ +++V +I + K G LE AR + E ++ KD VS+ +MIAGY Q+ ++AL F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M K + PD+ L S + C+ + + +G Q H + +G+ +VS+ NA++ +Y+RC
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC 494
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I ++ +F +I + ++WN +++ FAQ G +E+AL F +M +G + TF+S L
Sbjct: 495 GRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SA + ++ + + ++K G +E L+ + + G E A M E +
Sbjct: 555 SASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEMS-ERN 612
Query: 473 TGVWGSLLAAC 483
W +++ +C
Sbjct: 613 EVSWNTIITSC 623
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 183/389 (47%), Gaps = 25/389 (6%)
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPE-------RNTATY----NAMISGFLKHGRLEE 161
+ + C + C N R +Q +PE R Y N +I + K+G +
Sbjct: 42 LDFACALRACRGNGR------RWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP 95
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS----WTVMITGYVK 217
A R+FE++ R+ +S+ AML G+ + G ++A L M VV + +++ K
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155
Query: 218 NERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E F + R + + + +FV A+IT + + G A +F + +D V+FN +
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTL 215
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+G+AQ G E AL +F M + PD T+ S+ AC++L L +G Q H + + G
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI 275
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++ + +++ +Y +CG + + + F N+V WN ++ AF Q K+ F Q
Sbjct: 276 SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ 335
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G P+ T+ +L C +++ + L VK G L+D+ S+ G
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYG 394
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACV 484
LEKA ++ + M E D W S++A V
Sbjct: 395 WLEKARRVLE-MLKEKDVVSWTSMIAGYV 422
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 299/566 (52%), Gaps = 49/566 (8%)
Query: 57 ISALSRAGKISAARQLFDQMT----TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
++A + + I A RQ+ + KDV T NA++ Y + G + + +F+ MP ++
Sbjct: 209 VNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDV 268
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQ 168
VSWN +I+GC+ N A + M N T ++++ G + ++
Sbjct: 269 VSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGF 328
Query: 169 MPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
M + N S ++D + K +D AR + D+M ++++ +I+G R EA
Sbjct: 329 MIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEA 388
Query: 225 RELFYRMPDYDKNV-------------------------------------FVVTAMITG 247
LFY + V VV +I
Sbjct: 389 LSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDS 448
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K L +A +FE D ++ +MI +Q E A++LF M++ ++PD L
Sbjct: 449 YWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
S+ AC++L +G+Q H +I+ F ++ NA++ Y++CG I D+ELAF +
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+VSW+ +I AQHGH ++AL F +M G +P+ IT S+L AC HAG V+E+
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
F M +++GI + EHY+C++D+L RAG+L+ A ++ MPF+A+ +WG+LL A ++
Sbjct: 629 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHK 688
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
+ ELG+LAA+K+ L+P+ S +V+L+N YA+AGMW +V +VR LMK+ + K+ A SWI
Sbjct: 689 DPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWI 748
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHLEL 573
E+ +KVH F+ GD SHP +I+ +L
Sbjct: 749 EVKDKVHTFIVGDKSHPMTKEIYAKL 774
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 115/542 (21%), Positives = 220/542 (40%), Gaps = 115/542 (21%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N IS S+ + AR++FD++ ++W++++T Y NG + + F M + +
Sbjct: 41 NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 114 SWN---CMIAGCIDNDRI---------------------------------DDAFDYF-Q 136
++ C+ + R+ DDA F +
Sbjct: 101 CNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE 160
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PR------------------- 171
A ERN ++N ++S ++K+ + +A ++F +M P
Sbjct: 161 ADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220
Query: 172 --------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
++V + A++D +MK G VD A + + M +VVSW +I+G V
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 218 NERFCEARELFYRM-------------------------------------PDYDKNVFV 240
N A EL +M + D + ++
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYI 340
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
++ + K L++AR +F+ + +D + NA+I+G + G +EAL LF + K +
Sbjct: 341 GVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+ TL +V + ++L+ + RQ H L ++ GF + V N +I Y +C + D+
Sbjct: 401 GVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANR 460
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + S ++++ ++I A +Q H E A+ F +M G +PD SLL+AC
Sbjct: 461 VFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 520
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + ++K + + LV ++ G +E A +P E W +++
Sbjct: 521 YEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMI 578
Query: 481 AA 482
Sbjct: 579 GG 580
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 165/343 (48%), Gaps = 10/343 (2%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +IS + K R A R+F+++P +S+++++ + G A M + V
Sbjct: 41 NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 207 SWTV---MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF-E 262
++ V + R + +VFV A++ + G +++AR +F E
Sbjct: 101 CNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE 160
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
++ VS+N +++ Y +N +A+++F M+ +QP + V AC+ + +
Sbjct: 161 ADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GRQ H +V+R G++ +V NA++ MY + G + + + F ++ ++VSWN +I+
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+GH +A+ QM +G P+ T S+L AC AG + + M+K S+
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANA---DSD 337
Query: 443 HY--TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
Y LVD+ ++ L+ A ++ M F D + +L++ C
Sbjct: 338 DYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC 379
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 327/628 (52%), Gaps = 87/628 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV+++ + + G + AR++FD M K+V+TWN++I GY QNG QE+ ++F M V
Sbjct: 217 VFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRV 276
Query: 110 KNI--------------VSWNCMIAG----------CIDNDRI---------------DD 130
+ I + + +I G +D D I +D
Sbjct: 277 EGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIED 336
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP-------------------- 170
A F M E++ T+N +IS +++H ++ +A + M
Sbjct: 337 AELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAV 396
Query: 171 ---------------RRN----VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
RRN V+ +++D + K +D AR + D + +++V W +
Sbjct: 397 TSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTL 456
Query: 212 ITGYVKNERFCEARELFYRMPDYDK---NVFVVTAMITGFCKVGMLENARLLFERIQP-- 266
+ Y + EA +LFY+M +D NV ++I GF + G + A+ +F ++Q
Sbjct: 457 LAAYAQVGLSGEALKLFYQM-QFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLG 515
Query: 267 --KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ +++ +I+G AQ+G EA+ F M + ++P A++ SV AC+ + L GR
Sbjct: 516 FQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGR 575
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H + R+ F +V V +++ MY++CG I +++ F + S L +N +I+A+A HG
Sbjct: 576 AIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHG 635
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
+AL F + G +PD ITF S+LSAC HAG VNE ++LF MV + + P EHY
Sbjct: 636 QAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHY 695
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+V +LSR G L++A ++ MPF+ D + GSLL AC + +ELGE +K + +L+P
Sbjct: 696 GCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEP 755
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
NS YV LSN YAAAG W +V+ +R LMK +G+ K SWI+ G K++ F+ GD SHP
Sbjct: 756 SNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHP 815
Query: 565 CIDKIHLELKRASVQMKSVDDFVEIATS 592
++I+ L +M+ + +V IA++
Sbjct: 816 KTEEIYAMLAMLLSEMRFM-GYVPIASN 842
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 170/367 (46%), Gaps = 37/367 (10%)
Query: 139 PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI--SYTAMLDGFMKKGEVDKARAL 196
P +T+ + S RL +L E+ R + SY + K G + ++ L
Sbjct: 10 PNPHTSHFKPRKSSKFASTRL---AKLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHL 66
Query: 197 SDYMSFKNVVS----WTVMITGYVKNERFCEARELFYRMPD----YDKNVFVVTAMITGF 248
M F++ + ++ G V +++ R+ + KN +V T ++ +
Sbjct: 67 LSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFY 126
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K E A LF R++ ++ S+ A++ + G +E+AL F M + + PD+ L
Sbjct: 127 AKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLP 186
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
+V AC +LQL+ G+ H V++ GF A V V ++++ MY +CG + D+ F +
Sbjct: 187 NVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEK 246
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC-----------GH 417
N+V+WN++I + Q+G ++A+ F M + G +P +T S LSA GH
Sbjct: 247 NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGH 306
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
A + S+DL I+ SS +++ S+ G +E A + M E D W
Sbjct: 307 AIAILNSLDL-------DNILGSS-----IINFYSKVGLIEDAELVFSRM-LEKDVVTWN 353
Query: 478 SLLAACV 484
L+++ V
Sbjct: 354 LLISSYV 360
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
EN R L++ S+ I+ ++G +E++ L S M D Q + C
Sbjct: 38 ENRRSLYK--------SYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGC 89
Query: 315 SALQLLNEGRQSHVLVIRNG--FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
+ L+ G+Q H +++NG F N V ++ Y++C + F ++ N+ S
Sbjct: 90 VYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFS 149
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
W I+ + G E AL+ F +M NG PD ++L ACG S+ L L
Sbjct: 150 WAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACG-------SLQLIGLGK 202
Query: 433 KVYGIIPSSEHYTC------LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
V+G + C LVD+ + G LE A ++ M E + W S++ V N
Sbjct: 203 GVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM-VEKNVVTWNSMIVGYVQN 261
Query: 487 -LNVE 490
LN E
Sbjct: 262 GLNQE 266
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 299/566 (52%), Gaps = 49/566 (8%)
Query: 57 ISALSRAGKISAARQLFDQMT----TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
++A + + I A RQ+ + KDV T NA++ Y + G + + +F+ MP ++
Sbjct: 209 VNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDV 268
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQ 168
VSWN +I+GC+ N A + M N T ++++ G + ++
Sbjct: 269 VSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGF 328
Query: 169 MPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
M + N S ++D + K +D AR + D+M ++++ +I+G R EA
Sbjct: 329 MIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEA 388
Query: 225 RELFYRMPDYDKNV-------------------------------------FVVTAMITG 247
LFY + V VV +I
Sbjct: 389 LSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDS 448
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K L +A +FE D ++ +MI +Q E A++LF M++ ++PD L
Sbjct: 449 YWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
S+ AC++L +G+Q H +I+ F ++ NA++ Y++CG I D+ELAF +
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+VSW+ +I AQHGH ++AL F +M G +P+ IT S+L AC HAG V+E+
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
F M +++GI + EHY+C++D+L RAG+L+ A ++ MPF+A+ +WG+LL A ++
Sbjct: 629 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHK 688
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
+ ELG+LAA+K+ L+P+ S +V+L+N YA+AGMW +V +VR LMK+ + K+ A SWI
Sbjct: 689 DPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWI 748
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHLEL 573
E+ +KVH F+ GD SHP +I+ +L
Sbjct: 749 EVKDKVHTFIVGDKSHPMTKEIYAKL 774
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/542 (21%), Positives = 219/542 (40%), Gaps = 115/542 (21%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N IS S+ + AR+ FD++ ++W++++T Y NG + + F M + +
Sbjct: 41 NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 114 SWN---CMIAGCIDNDRI---------------------------------DDAFDYF-Q 136
++ C+ + R+ DDA F +
Sbjct: 101 CNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE 160
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PR------------------- 171
A ERN ++N ++S ++K+ + +A ++F +M P
Sbjct: 161 ADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220
Query: 172 --------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
++V + A++D +MK G VD A + + M +VVSW +I+G V
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 218 NERFCEARELFYRM-------------------------------------PDYDKNVFV 240
N A EL +M + D + ++
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYI 340
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
++ + K L++AR +F+ + +D + NA+I+G + G +EAL LF + K +
Sbjct: 341 GVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+ TL +V + ++L+ + RQ H L ++ GF + V N +I Y +C + D+
Sbjct: 401 GVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANR 460
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + S ++++ ++I A +Q H E A+ F +M G +PD SLL+AC
Sbjct: 461 VFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 520
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + ++K + + LV ++ G +E A +P E W +++
Sbjct: 521 YEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMI 578
Query: 481 AA 482
Sbjct: 579 GG 580
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 164/343 (47%), Gaps = 10/343 (2%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +IS + K R A R F+++P +S+++++ + G A M + V
Sbjct: 41 NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 207 SWTV---MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF-E 262
++ V + R + +VFV A++ + G +++AR +F E
Sbjct: 101 CNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE 160
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
++ VS+N +++ Y +N +A+++F M+ +QP + V AC+ + +
Sbjct: 161 ADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GRQ H +V+R G++ +V NA++ MY + G + + + F ++ ++VSWN +I+
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+GH +A+ QM +G P+ T S+L AC AG + + M+K S+
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANA---DSD 337
Query: 443 HY--TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
Y LVD+ ++ L+ A ++ M F D + +L++ C
Sbjct: 338 DYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC 379
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 291/511 (56%), Gaps = 14/511 (2%)
Query: 85 NAIITGYWQ----NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE 140
NA+++ Y + L ++ +F +P K+ SW M+ G + N D + + M E
Sbjct: 188 NALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDE 247
Query: 141 R-NTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARA 195
YNAMISG++ G +EA + +M + +Y +++ + +
Sbjct: 248 NMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQ 307
Query: 196 LSDYMSFKNVVSW---TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
+ Y+ + S+ ++T Y K +F EAR +F +MP K++ A+++G+ G
Sbjct: 308 VHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPA--KDLVSWNALLSGYVSSG 365
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ A+L+F+ ++ K+ +S+ MI+G A+NG EE L+LFS M + +P D
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
+C+ L G+Q H +++ GF++++S NA+ITMY++CG + +++ FR + + VS
Sbjct: 426 SCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVS 485
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WN +IAA QHGH +A+ + +M G PD ITFL++L+AC HAG V++ F M
Sbjct: 486 WNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSME 545
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
VY I P ++HY L+D+L R+G+ +A I + +PF+ +W +LL+ C ++ N+ELG
Sbjct: 546 TVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELG 605
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNK 552
+AA K+ L P++ Y++LSN+YAA G W +V RVR LM+++GV K+ A SWIE+ +
Sbjct: 606 IIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Query: 553 VHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
VH FL D SHP + ++ L+ +M+ +
Sbjct: 666 VHTFLVDDTSHPEAEAVYKYLQDLGKEMRRL 696
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 172/410 (41%), Gaps = 87/410 (21%)
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
++D + K E+D AR L D +S + ++ T M++GY + AR +F P ++
Sbjct: 55 LIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTV 114
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
+ AMITGF + N A+ LF M
Sbjct: 115 MYNAMITGF-------------------------------SHNNDGYSAINLFCKMKHEG 143
Query: 300 MQPDDATLVSVFTACSALQLLNEGR--QSHVLVIRNGFEANVSVCNAVITMYSRCG---- 353
+PDD T SV AL + +E + Q H +++G SV NA++++YSRC
Sbjct: 144 FKPDDFTYASVLAGL-ALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPS 202
Query: 354 ------------------------------GILD--SELAFRQIHSPNLVSWNTIIAAFA 381
G D EL + LV++N +I+ +
Sbjct: 203 LLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYV 262
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
G Y++AL +M +G + D T+ S++ AC +A L +L +V+ +
Sbjct: 263 NCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANA-------RLLQLGKQVHAYVLRR 315
Query: 442 EHYT-----CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
E ++ LV + + G+ +A I + MP + D W +LL+ V + ++ +L
Sbjct: 316 EDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
K+M+E +N ++++ + A G + ++ MK +G + C Y++
Sbjct: 375 KEMKE---KNILSWMIMISGLAENGFGEEGLKLFSCMKREGF-EPCDYAF 420
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 53/284 (18%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N+ ++ + GK + AR +F++M KD+++WNA+++GY +G + E+K +F+ M KNI
Sbjct: 323 DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP--------------------------------- 139
+SW MI+G +N ++ F M
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQ 442
Query: 140 ------ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG----- 188
+ + + NA+I+ + K G +EEA ++F MP + +S+ A++ + G
Sbjct: 443 LVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEA 502
Query: 189 -----EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTA 243
E+ K D ++F V++ + ++ + E YR+P +
Sbjct: 503 VDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADH---YAR 559
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVS-FNAMIAGYAQNGVAE 286
+I C+ G A + E + K + A+++G +G E
Sbjct: 560 LIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNME 603
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+++ + NA I+ ++ G + A+Q+F M D ++WNA+I Q+G E+
Sbjct: 443 LVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEA 502
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
++++ M K I +++ ++ C +D YF +M Y +I
Sbjct: 503 VDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLID 562
Query: 152 GFLKHGRLEEATRLFEQMPRRNVIS-YTAMLDGFMKKGEVD 191
+ G+ EA + E +P + + A+L G G ++
Sbjct: 563 LLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNME 603
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 197/636 (30%), Positives = 312/636 (49%), Gaps = 115/636 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV NA I+ R G A ++F M +D +T+N +I+G+ Q G + + +F+ M
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237
Query: 110 KNI----VSWNCMIAGC--------------------IDNDRI---------------DD 130
+ V+ + ++A C I +D I +
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVET 297
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAML----- 181
A F + N +N M+ F + L ++ LF QM R N +Y +L
Sbjct: 298 ALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTC 357
Query: 182 ------------------------------DGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
D + K G ++KAR + + + K+VVSWT M
Sbjct: 358 TREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSM 417
Query: 212 ITGYVKNERFCEARELFYRM------PD-------------------------------Y 234
I GYV++E +A F M PD Y
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+V + A++ + + G + A FE I+ KD +++N +++G+AQ+G+ EEAL++F
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMR 537
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + ++ + T VS +A + L + +G+Q H VI+ G V NA+I++Y +CG
Sbjct: 538 MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGS 597
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
D+++ F ++ N VSWNTII + +QHG +AL F QM G P+ +TF+ +L+A
Sbjct: 598 FEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAA 657
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V E + F+ M YGI P +HY C++DI RAGQL++A + + MP AD
Sbjct: 658 CSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM 717
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VW +LL+AC ++ N+E+GE AAK + EL+P +SA YV+LSN YA W + +VR +M+
Sbjct: 718 VWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMR 777
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
++GV K+ SWIE+ N VH F GD HP ++I+
Sbjct: 778 DRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIY 813
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/551 (24%), Positives = 242/551 (43%), Gaps = 117/551 (21%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
+Y V N I S+ G + AR++F++++ +D ++W A+++GY QNG +E+ L++ M
Sbjct: 75 KYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQM 134
Query: 108 ------PVKNIVS---WNCMIAGCIDNDRIDDAFDY------------------------ 134
P ++S +C A R+ A Y
Sbjct: 135 HRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSF 194
Query: 135 ------FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP------------------ 170
F MP R+T T+N +ISG + G E A +FE+M
Sbjct: 195 RLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAAC 254
Query: 171 ---------------------RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+ I ++LD ++K G+V+ A + + NVV W
Sbjct: 255 ASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWN 314
Query: 210 VMITGYVKNERFCEARELFYRM------PD------------------------------ 233
+M+ + + ++ ELF +M P+
Sbjct: 315 LMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Query: 234 -YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
++ +++V +I + K G LE AR + E ++ KD VS+ +MIAGY Q+ ++AL F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M K + PD+ L S + C+ + + +G Q H + +G+ +VS+ NA++ +Y+RC
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC 494
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I ++ +F +I + ++WN +++ FAQ G +E+AL F +M +G + TF+S L
Sbjct: 495 GRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SA + ++ + + ++K G +E L+ + + G E A M E +
Sbjct: 555 SASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEMS-ERN 612
Query: 473 TGVWGSLLAAC 483
W +++ +C
Sbjct: 613 EVSWNTIITSC 623
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 183/389 (47%), Gaps = 25/389 (6%)
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPE-------RNTATY----NAMISGFLKHGRLEE 161
+ + C + C N R +Q +PE R Y N +I + K+G +
Sbjct: 42 LDFACALRACRGNGR------RWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP 95
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS----WTVMITGYVK 217
A R+FE++ R+ +S+ AML G+ + G ++A L M VV + +++ K
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155
Query: 218 NERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E F + R + + + +FV A+IT + + G A +F + +D V+FN +
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTL 215
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+G+AQ G E AL +F M + PD T+ S+ AC++L L +G Q H + + G
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI 275
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++ + +++ +Y +CG + + + F N+V WN ++ AF Q K+ F Q
Sbjct: 276 SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ 335
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G P+ T+ +L C +++ + L VK G L+D+ S+ G
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYG 394
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACV 484
LEKA ++ + M E D W S++A V
Sbjct: 395 WLEKARRVLE-MLKEKDVVSWTSMIAGYV 422
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 192/647 (29%), Positives = 308/647 (47%), Gaps = 110/647 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
V + +++ L ++G+++ A LFD+M K+V+ W ++++GY +NG + + +F M
Sbjct: 48 VVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVE 107
Query: 109 ---VKNIVSWNCMIAGCID-----------------------------------NDRIDD 130
N + N + C D +
Sbjct: 108 SGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPA 167
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM-------------------PR 171
A + F M + Y ++IS F ++G E A QM PR
Sbjct: 168 AKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPR 227
Query: 172 ------------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
++V S TA++D + + GE A+A+ D + KNVVSW M+
Sbjct: 228 VLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQ 287
Query: 214 GYVKNERFCEARELFYRM--PDYDKNVFVVT----------------------------- 242
Y+++ R EA ++F M D N F ++
Sbjct: 288 LYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIR 347
Query: 243 ---AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
A+++ + + G++E + +I+ D VS+ I+ QNG E+A+ L M
Sbjct: 348 VSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEG 407
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
P+ SV ++C+ + L++G Q H L ++ G ++ + NA+I MYS+CG + +
Sbjct: 408 FTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSAR 467
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
LAF +H+ ++ SWN++I AQHG KAL FS+M NG PD TFL +L C H+G
Sbjct: 468 LAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSG 527
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
V E F LM+ Y P+ HY C++D+L R G+ ++A ++ MPFE D +W +L
Sbjct: 528 MVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTL 587
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
LA+C ++ N+++G+LAA ++ EL ++SA YV++SN+YA G W D +VR M E GV
Sbjct: 588 LASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVK 647
Query: 540 KQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDF 586
K SWIEI N+VH F DMSHP D I+ L M+ D+
Sbjct: 648 KDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQDFDEL 694
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 225/503 (44%), Gaps = 92/503 (18%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
+Q V+ + A I SR G+ A+ +FD + K+V++W +++ Y ++G L+E+ +F
Sbjct: 245 SQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGD 304
Query: 107 MPVK----NIVSWNCMIAGC-------------IDNDRIDDAFDYFQAMPERNTATYNAM 149
M + N + + ++ C I +D I D NA+
Sbjct: 305 MISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITD------------IRVSNAL 352
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM--------- 200
+S + + G +EE + ++ +++S+T + + G +KA AL M
Sbjct: 353 LSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNG 412
Query: 201 -SFKNVVSWTVMITGYVKNERF-CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
+F +V+S + + +F C A +L D + A+I + K G + +AR
Sbjct: 413 YAFSSVLSSCADVASLDQGMQFHCLALKL-----GCDSEICTGNALINMYSKCGQMGSAR 467
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
L F+ + D S+N++I G+AQ+G A +AL +FS M ++PDD+T + V C+
Sbjct: 468 LAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSG 527
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
++ EG L R +I YS +P + +I
Sbjct: 528 MVEEGE----LFFR-----------LMIDQYS---------------FTPAPSHYACMID 557
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
++G +++AL + M F+PD + + +LL++C K++ ++D+ +L +
Sbjct: 558 MLGRNGRFDEALRMINDM---PFEPDALIWKTLLASC----KLHRNLDIGKLAADRLMEL 610
Query: 439 P--SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV-INLNVELGELA 495
S Y + +I + G+ E A ++ + M +TGV A C I +N E+ A
Sbjct: 611 SDRDSASYVLMSNIYAMHGEWEDARKVRRRMD---ETGVKKD--AGCSWIEINNEVHTFA 665
Query: 496 AKKMRELDPQNSAVYVMLSNLYA 518
++ M P + ++Y ML L A
Sbjct: 666 SRDMSH--PNSDSIYQMLGELVA 686
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 39 NCL-IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CL ++L + NA I+ S+ G++ +AR FD M T DV +WN++I G+ Q+G
Sbjct: 435 HCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDA 494
Query: 98 QESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNA 148
++ +F M I ++ ++ GC + +++ +F+ M ++ + T Y
Sbjct: 495 NKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC 554
Query: 149 MISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDY---MSFKN 204
MI ++GR +EA R+ MP + + + +L +D + +D +S ++
Sbjct: 555 MIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRD 614
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPD 233
S+ +M Y + + +AR++ RM +
Sbjct: 615 SASYVLMSNIYAMHGEWEDARKVRRRMDE 643
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 327/628 (52%), Gaps = 87/628 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV+++ + + G + AR++FD M K+V+TWN++I GY QNG QE+ ++F M V
Sbjct: 1312 VFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRV 1371
Query: 110 KNI--------------VSWNCMIAG----------CIDNDRI---------------DD 130
+ I + + +I G +D D I +D
Sbjct: 1372 EGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIED 1431
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP-------------------- 170
A F M E++ T+N +IS +++H ++ +A + M
Sbjct: 1432 AELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAV 1491
Query: 171 ---------------RRN----VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
RRN V+ +++D + K +D AR + D + +++V W +
Sbjct: 1492 TSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTL 1551
Query: 212 ITGYVKNERFCEARELFYRMPDYDK---NVFVVTAMITGFCKVGMLENARLLFERIQP-- 266
+ Y + EA +LFY+M +D NV ++I GF + G + A+ +F ++Q
Sbjct: 1552 LAAYAQVGLSGEALKLFYQM-QFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLG 1610
Query: 267 --KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ +++ +I+G AQ+G EA+ F M + ++P A++ SV AC+ + L GR
Sbjct: 1611 FQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGR 1670
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H + R+ F +V V +++ MY++CG I +++ F + S L +N +I+A+A HG
Sbjct: 1671 AIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHG 1730
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
+AL F + G +PD ITF S+LSAC HAG VNE ++LF MV + + P EHY
Sbjct: 1731 QAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHY 1790
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+V +LSR G L++A ++ MPF+ D + GSLL AC + +ELGE +K + +L+P
Sbjct: 1791 GCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEP 1850
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
NS YV LSN YAAAG W +V+ +R LMK +G+ K SWI+ G K++ F+ GD SHP
Sbjct: 1851 SNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHP 1910
Query: 565 CIDKIHLELKRASVQMKSVDDFVEIATS 592
++I+ L +M+ + +V IA++
Sbjct: 1911 KTEEIYAMLAMLLSEMRFM-GYVPIASN 1937
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ KN +V T ++ + K E A LF R++ ++ S+ A++ + G +E+AL F
Sbjct: 1207 FAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFI 1266
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + PD+ L +V AC +LQL+ G+ H V++ GF A V V ++++ MY +CG
Sbjct: 1267 EMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCG 1326
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ F + N+V+WN++I + Q+G ++A+ F M + G +P +T S LS
Sbjct: 1327 VLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLS 1386
Query: 414 AC-----------GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
A GHA + S+DL ++ + +++ S+ G +E A
Sbjct: 1387 ASANLDALIEGKQGHAIAILNSLDLDNILG------------SSIINFYSKVGLIEDAEL 1434
Query: 463 ITQGMPFEADTGVWGSLLAACV 484
+ M E D W L+++ V
Sbjct: 1435 VFSRM-LEKDVVTWNLLISSYV 1455
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
EN R L++ S+ I+ ++G +E++ L S M D Q + C
Sbjct: 1133 ENRRSLYK--------SYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGC 1184
Query: 315 SALQLLNEGRQSHVLVIRNG--FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
+ L+ G+Q H +++NG F N V ++ Y++C + F ++ N+ S
Sbjct: 1185 VYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFS 1244
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
W I+ + G E AL+ F +M NG PD ++L ACG S+ L L
Sbjct: 1245 WAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACG-------SLQLIGLGK 1297
Query: 433 KVYGIIPSSEHYTC------LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
V+G + C LVD+ + G LE A ++ M E + W S++ V N
Sbjct: 1298 GVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM-VEKNVVTWNSMIVGYVQN 1356
Query: 487 -LNVE 490
LN E
Sbjct: 1357 GLNQE 1361
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 197/647 (30%), Positives = 318/647 (49%), Gaps = 119/647 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L + +V NA +S G + +A +F M+ +D +T+N +I G Q G+ +++
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 101 KNLFQSM------PVKNIV----------------------------SWNCMIAGCIDN- 125
LF+ M P N + + N I G + N
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 126 ----DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI--SYT- 178
I+ A DYF N +N M+ + L + R+F QM ++ YT
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 179 ------------------------------------AMLDGFMKKGEVDKARALSDYMSF 202
++D + K G++D A + +
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPD----------------------------- 233
K+VVSWT MI GY + +A F +M D
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 234 --------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ ++ A++T + + G +E + L FE+ + D +++NA+++G+ Q+G
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EEALR+F M + + ++ T S A S + +G+Q H ++ + G+++ VCNA+
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I+MY++CG I D+E F ++ + N VSWN II A+++HG +AL F QM + P+
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 793
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
+T + +LSAC H G V++ + FE M YG+ P EHY C+VD+L+RAG L +A + Q
Sbjct: 794 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW-- 523
MP + D VW +LL+ACV++ N+E+GE AA + EL+P++SA YV+LSNLYA + W
Sbjct: 854 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDA 913
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
RD+TR + MKE+GV K+ SWIE+ N +H F GD +HP D+IH
Sbjct: 914 RDLTRQK--MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 958
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 182/421 (43%), Gaps = 51/421 (12%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI 150
Y G L + +F MP + I +WN MI + I + F F M N
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 151 SGFLKHGR--------LEEA-TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
SG L+ R +E+ R+ Q R + + ++D + + G VD AR + D +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------------- 233
K+ SW MI+G KNE EA LF M P
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+ + +V A+++ + +G L +A +F + +D V++N +I G +Q G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
E+A+ LF M ++PD TL S+ ACSA L G+Q H + GF +N + A
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ +Y++C I + F + N+V WN ++ A+ + F QM + P+
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQ 462
T+ S+L C G + + ++K + + Y C L+D+ ++ G+L+ AW
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA---YVCSVLIDMYAKLGKLDTAWD 546
Query: 463 I 463
I
Sbjct: 547 I 547
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 168/362 (46%), Gaps = 44/362 (12%)
Query: 142 NTATYNAMISGFLK-HGRLEEATRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARAL 196
N T ++ G LK +G L+E +L Q+ + + S + D ++ KG++ A +
Sbjct: 83 NHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKV 142
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----------------- 233
D M + + +W MI E LF RM P+
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 234 YD---------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+D + V +I + + G ++ AR +F+ ++ KD S+ AMI+G
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
++N EA+RLF M + + P SV +AC ++ L G Q H LV++ GF ++
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
VCNA++++Y G ++ +E F + + V++NT+I +Q G+ EKA+ F +M L
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+G +PD T SL+ AC G + L K+ G +++ L+++ ++ +E
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALLNLYAKCADIE 441
Query: 459 KA 460
A
Sbjct: 442 TA 443
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 197/452 (43%), Gaps = 30/452 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N I SR G + AR++FD + KD +W A+I+G +N E+ LF M V
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 112 IV----SWNCMIAGC--IDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEAT 163
I+ +++ +++ C I++ I + ++ TY NA++S + G L A
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+F M +R+ ++Y +++G + G +KA L M + + + V C
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA---CS 400
Query: 224 ARELFYRMPD---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
A +R + N + A++ + K +E A F + ++ V +N
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
M+ Y + R+F M ++ P+ T S+ C L L G Q H +I+
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F+ N VC+ +I MY++ G + + + ++VSW T+IA + Q+ +KAL F
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
QM G D + + +SAC + E + V G LV + SR
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRC 639
Query: 455 GQLEKAWQITQGMPFE----ADTGVWGSLLAA 482
G++E+++ + FE D W +L++
Sbjct: 640 GKIEESY-----LAFEQTEAGDNIAWNALVSG 666
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 2/188 (1%)
Query: 300 MQPDDATLVSVFTACSALQ-LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++P+ TL + C L+EGR+ H +++ G ++N + + Y G + +
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F ++ + +WN +I A + F +M P+ TF +L AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ ++ + G+ S+ L+D+ SR G ++ A ++ G+ + D W +
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DHSSWVA 258
Query: 479 LLAACVIN 486
+++ N
Sbjct: 259 MISGLSKN 266
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 295/526 (56%), Gaps = 16/526 (3%)
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF 132
F + TT I N +I Y++ G E++ +F M V+N+ SWN M+AG +++A
Sbjct: 93 FKRPTT---IVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNAR 149
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKG 188
F M E++ ++N ++ + K G EA L+ R N S+ +L +K
Sbjct: 150 KLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLK 209
Query: 189 EVDKARALSDYMS----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAM 244
E+ A+ + + N+V + ++ Y K AR LF M K++ T +
Sbjct: 210 ELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEM--LVKDIHAWTTI 267
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
++G+ K G + +A LF ++ K+ VS++A+I+GYA+N + EAL F+ M+K + P+
Sbjct: 268 VSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQ 327
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
T S AC+++ L G+Q H +IR F N V +++I MYS+CG + S F
Sbjct: 328 YTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHL 387
Query: 365 I-HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+ + ++V WNT+I+A AQ+GH EKA+ F+ M +G PD ITF+ +LSAC H+G V E
Sbjct: 388 MGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQE 447
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ F+ M +G+ P EHY+CL+D+L RAG + + M + D VW +LL C
Sbjct: 448 GLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVC 507
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
I+ N+ELG A+++ EL PQ+SA YV L++LYA G W V +VR LM E+ + K+
Sbjct: 508 RIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERG 567
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEI 589
SWI++GNK H F+ D HP ++I+L L++ + + +DF+ I
Sbjct: 568 ISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTE--EDFLTI 611
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 136/284 (47%), Gaps = 36/284 (12%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
FS V + K+ L A ++ Q+ +++ ++I+ Y + G ++ ++ LF
Sbjct: 196 FSFAGVLILCVKLKELQLAKQVHG--QVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLF 253
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
M VK+I +W +++G ++ A + F MPE+N +++A+ISG+ ++ EA
Sbjct: 254 DEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALD 313
Query: 165 LFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
F +M + + ++++ L + + + Y +I Y +
Sbjct: 314 YFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGY-----------LIRTYFR--- 359
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK-DCVSFNAMIAGY 279
C N VV+++I + K GMLE + +F + K D V +N MI+
Sbjct: 360 -C--------------NTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISAL 404
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
AQNG E+A+++F+ M++ ++PD T + + +ACS L+ EG
Sbjct: 405 AQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEG 448
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 23/294 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ ++++ + A ++ G++ AR LFD+M KD+ W I++GY + G + + LF MP
Sbjct: 230 LVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPE 289
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATY----NAMISGFLKHGRL 159
KN VSW+ +I+G N +A DYF M PE+ T + A I+ LKHG+
Sbjct: 290 KNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAA-LKHGK- 347
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMITGYVKN 218
+ L R N I ++++D + K G ++ + + M K +VV W MI+ +N
Sbjct: 348 QVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQN 407
Query: 219 ERFCEARELFYRM------PDYDKNVFVVTAMI-TGFCKVGMLENARLLFERIQPKDCVS 271
+A ++F M PD + +++A +G + G+ + ++ D
Sbjct: 408 GHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEH 467
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
++ +I + G E L + + M +PDD ++ C + GR+
Sbjct: 468 YSCLIDLLGRAGCFVE---LVNELENMSCKPDDRVWSALLGVCRIHNNIELGRK 518
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 197/624 (31%), Positives = 308/624 (49%), Gaps = 90/624 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQM----TTKDVITWNAIITGYWQNGFLQESKNLFQ 105
VF+ N +S + G+ A + M D +TWNAII+GY Q+G +E+ F
Sbjct: 256 VFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFL 315
Query: 106 SMP-----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISG---- 152
M N+VSW +IAG N +A F+ M + N+ T + +S
Sbjct: 316 EMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNL 375
Query: 153 -FLKHGR-------------------------------LEEATRLFEQMPRRNVISYTAM 180
L+HGR +E A R F + + +++S+ AM
Sbjct: 376 SLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAM 435
Query: 181 LDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNERFCEARELFYRMPDY-- 234
L G+ +G ++A L M F+ ++++W ++TG+ + A E F RM
Sbjct: 436 LAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGM 495
Query: 235 DKNVFVVT-----------------------------------AMITGFCKVGMLENARL 259
D N ++ A+I+ + LE A
Sbjct: 496 DPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACS 555
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F + +D V +N++I+ AQ+G + AL L M +++ + T+VS ACS L
Sbjct: 556 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 615
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L +G++ H +IR G + + N++I MY RCG I S F + +LVSWN +I+
Sbjct: 616 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 675
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ HG A+ F Q G P+ ITF +LLSAC H+G + E F++M Y + P
Sbjct: 676 YGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 735
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+ E Y C+VD+LSRAGQ + + + MPFE + VWGSLL AC I+ N +L E AA+ +
Sbjct: 736 AVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYL 795
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
EL+PQ+S YV+++N+Y+AAG W D ++R LMKE+GVTK SWIE+ K+H F+ G
Sbjct: 796 FELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVG 855
Query: 560 DMSHPCIDKIHLELKRASVQMKSV 583
D SHP +++I +++ +K +
Sbjct: 856 DTSHPLMEQISAKMESLYFDIKEI 879
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 239/504 (47%), Gaps = 62/504 (12%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ + + + G + AR++FD+M+ ++V +W AI+ Y G +E+ LF M +
Sbjct: 125 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE 184
Query: 111 NI----VSWNCMIAGC--IDNDRI-DDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEA 162
+ + + C + N R+ D +DY ++ E N+ +++ F+K GR++ A
Sbjct: 185 GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIA 244
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKN 218
R FE++ ++V + M+ G+ KGE KA M V V+W +I+GY ++
Sbjct: 245 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQS 304
Query: 219 ERFCEARELFYRM---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+F EA + F M D+ NV VS+ A+
Sbjct: 305 GQFEEASKYFLEMGGLKDFKPNV-------------------------------VSWTAL 333
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR-NG 334
IAG QNG EAL +F M+ ++P+ T+ S +AC+ L LL GR+ H I+
Sbjct: 334 IAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE 393
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
++++ V N+++ Y++C + + F I +LVSWN ++A +A G +E+A+ S
Sbjct: 394 LDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLS 453
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M G +PD IT+ L++ G +++ F+ M + G+ P++ T + L+
Sbjct: 454 EMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSM-GMDPNT---TTISGALAAC 509
Query: 455 GQLE--KAWQITQGMPF----EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
GQ+ K + G E TGV +L++ + + E+A EL ++
Sbjct: 510 GQVRNLKLGKEIHGYVLRNHIELSTGVGSALIS---MYSGCDSLEVACSVFSELSTRDVV 566
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLL 532
V+ + + A +G R V + LL
Sbjct: 567 VWNSIISACAQSG--RSVNALDLL 588
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 11/271 (4%)
Query: 281 QNGVAEEALRLFSGMIKMDM-QPDDATLV--SVFTACSALQLLNEGRQSHVLVIRNGFEA 337
+NGV A L S MD+ PD+ + S+ C L L G Q H ++ NG +
Sbjct: 66 RNGVLNNAAMLLS---SMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDV 122
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ + ++ +Y + G + D+ F ++ N+ SW I+ + G YE+ + F M
Sbjct: 123 CEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMV 182
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
G PD F + AC D+++ M+ + G +S ++D+ + G++
Sbjct: 183 NEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSI-GFEGNSCVKGSILDMFIKCGRM 241
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVIN--LNVELGELAAKKMRELDPQNSAVYVMLSN 515
+ A + + + F+ D +W +++ L ++ K+ + P ++S
Sbjct: 242 DIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG 300
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
YA +G + + ++ L M K SW
Sbjct: 301 -YAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 296/548 (54%), Gaps = 47/548 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D + NA++ Y + G L+++ ++F + +IVSWN +IAGC+ ++ A + + M
Sbjct: 145 DAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMN 204
Query: 140 ERNTATYNAMISGFLKH---------GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
+ +S LK GR ++ + M + + ++D + K +
Sbjct: 205 KSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLG-VGLIDMYSKCNSM 263
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------------- 231
D AR + M +++++W +I+G+ +NE EA LF M
Sbjct: 264 DDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSI 323
Query: 232 ------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
++ + +VV ++I + K G +E+A +FE D V F
Sbjct: 324 AALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFT 383
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+++ YAQ+G EEALRL+ M ++PD S+ AC++L +G+Q HV +++
Sbjct: 384 SLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKF 443
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GF +++ N+++ MY++CG I D+ AF +I +VSW+ +I AQHG+ ++AL F
Sbjct: 444 GFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLF 503
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
QM G P+ IT +S+L AC HAG V E+ F M ++GI P EHY C++D+L R
Sbjct: 504 KQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGR 563
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
AG+LE A ++ MPF+A+ VWG+LL A I+ N++LGE AA+ + L+P+ S +V+L
Sbjct: 564 AGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLL 623
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
+N+YA+ GMW V RVR LMK+ V K+ SW+E+ +KV+ F+ GD SH +I+ +L
Sbjct: 624 ANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKL 683
Query: 574 KRASVQMK 581
S +K
Sbjct: 684 DELSDLLK 691
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 210/424 (49%), Gaps = 15/424 (3%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV N+ + ++ G AR LFD + + V++WNA+ + Y + E+ +LF M +
Sbjct: 46 FVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLS 105
Query: 111 NI----VSWNCMIAGCI---DNDRIDDAFDYFQAMPERNTA-TYNAMISGFLKHGRLEEA 162
I S + MI C D+ + Y + + A + NA++ + K G LE+A
Sbjct: 106 GIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDA 165
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+ +F+++ + +++S+ A++ G + +A L M+ + ++ +K
Sbjct: 166 SSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGM 225
Query: 223 EARELFYRMP------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
REL ++ D + F+ +I + K +++ARL+F+ + +D +++NA+I
Sbjct: 226 ALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVI 285
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+G++QN EEA LF M + + TL +V + +ALQ RQ H L +++GFE
Sbjct: 286 SGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFE 345
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ V N++I Y +CG + D+ F + +LV + +++ A+AQ G E+AL + +M
Sbjct: 346 FDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEM 405
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G PD SLL+AC + + ++K +G + LV++ ++ G
Sbjct: 406 QDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILK-FGFMSDIFAGNSLVNMYAKCGS 464
Query: 457 LEKA 460
+E A
Sbjct: 465 IEDA 468
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 131/249 (52%), Gaps = 2/249 (0%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+D + FV +++ + K G +AR LF+ I + VS+NA+ + Y + + EA+ LF
Sbjct: 41 FDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFH 100
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ ++P++ +L S+ C+ L+ +GR+ H +I+ G++++ NA++ MY++ G
Sbjct: 101 DMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVG 160
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ F +I P++VSWN IIA H ++ +AL +M +G P+ T S L
Sbjct: 161 ILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALK 220
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC L ++K+ + S L+D+ S+ ++ A + + MP E D
Sbjct: 221 ACAGMALRELGRQLHSSLIKM-DMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMP-ERDM 278
Query: 474 GVWGSLLAA 482
W ++++
Sbjct: 279 IAWNAVISG 287
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 113/223 (50%), Gaps = 8/223 (3%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
SV AC+ + L G+Q H +V+ GF+++ V N+++ +Y++CGG D+ F I
Sbjct: 15 SVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDR 74
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
++VSWN + + + + +A+ F M L+G P+ + S+++ C + +
Sbjct: 75 SVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIH 134
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
++K+ G + LVD+ ++ G LE A + + + D W +++A CV++
Sbjct: 135 GYLIKL-GYDSDAFSANALVDMYAKVGILEDASSVFDEIA-KPDIVSWNAIIAGCVLH-- 190
Query: 489 VELGELAAKKMRELDPQN--SAVYVMLSNLYAAAGM-WRDVTR 528
E A + +RE++ ++ + S L A AGM R++ R
Sbjct: 191 -EYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGR 232
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 295/559 (52%), Gaps = 56/559 (10%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM- 107
+VFV N + A + G ++AAR++F +M KD +T+NA++ G + G ++ LF +M
Sbjct: 383 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 442
Query: 108 ----------------------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT 145
V N+ N ++ D +DD F MPER+ +
Sbjct: 443 RAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVS 502
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFMKKGEVDKARALSDYMS 201
YN +I+ + + RLF +M + R V+ Y ML A +L D
Sbjct: 503 YNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS---------VAGSLPDVHI 553
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
K + + V++ G + + A+I + K GML+ A+ F
Sbjct: 554 GKQIHAQLVLL-GLASED-------------------LLGNALIDMYSKCGMLDAAKSNF 593
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
K +S+ A+I GY QNG EEAL+LFS M + ++PD AT S+ A S+L ++
Sbjct: 594 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 653
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
GRQ H +IR+G++++V + ++ MY++CG + ++ F ++ N +SWN +I+A+A
Sbjct: 654 LGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYA 713
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
+G + A+ F M GF+PD +TFLS+L+AC H G +E M F LM Y I P
Sbjct: 714 HYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWK 773
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
EHY C++D L R G + ++ MPF+AD +W S+L +C I+ N EL +AA K+
Sbjct: 774 EHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFG 833
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
++P ++ YV+LSN+YA AG W D V+ +M+++GV K+ YSW+EI K++ F D+
Sbjct: 834 MEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDL 893
Query: 562 SHPCIDKIHLELKRASVQM 580
+ P ID+I EL R +M
Sbjct: 894 TSPMIDEIKDELDRLYKEM 912
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 212/463 (45%), Gaps = 46/463 (9%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + +L +G + AR +FDQM K++ + N I++ Y +G L +++LF S P +N
Sbjct: 261 NLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNAT 320
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATY--------------------- 146
+W M+ R DA F+AM P+R T T
Sbjct: 321 TWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGL 380
Query: 147 -------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
N ++ + KHG L A R+F +M ++ ++Y AM+ G K+G +A L
Sbjct: 381 DTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAA 440
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M + + Y + R L NVFV +++ + K L++ R
Sbjct: 441 MRRAGYSRHPLHLLQY-SHSRSRSTSVL---------NVFVNNSLLDFYSKCDCLDDMRR 490
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LF+ + +D VS+N +IA YA N A LRLF M K+ ++ + +L
Sbjct: 491 LFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPD 550
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
++ G+Q H ++ G + + NA+I MYS+CG + ++ F + +SW +I
Sbjct: 551 VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 610
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ Q+G +E+AL FS M G PD TF S++ A + L +++ G
Sbjct: 611 YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKS 669
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
S + LVD+ ++ G L++A + MP E ++ W ++++A
Sbjct: 670 SVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 711
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 49/350 (14%)
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
T N + L G L A +F+QMP +N+ S +L + G++ A+ L
Sbjct: 257 TYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPH 316
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM------PD----------------------- 233
+N +WT+M+ + R +A LF M PD
Sbjct: 317 RNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAI 376
Query: 234 ---YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
D +VFV ++ +CK G+L AR +F + KD V++NAM+ G ++ G+ +AL+
Sbjct: 377 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 436
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
LF+ M + L+ + S R + VL NV V N+++ YS
Sbjct: 437 LFAAMRRAGYSRHPLHLLQYSHSRS--------RSTSVL--------NVFVNNSLLDFYS 480
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+C + D F ++ + VS+N IIAA+A + L F +M GFD + + +
Sbjct: 481 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 540
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+LS G V+ + +V + G+ L+D+ S+ G L+ A
Sbjct: 541 MLSVAGSLPDVHIGKQIHAQLV-LLGLASEDLLGNALIDMYSKCGMLDAA 589
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 56/316 (17%)
Query: 25 STPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITW 84
S PD H+ L+ L S + NA I S+ G + AA+ F + K I+W
Sbjct: 547 SLPDVHIGKQIHAQLVLLGLASED--LLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 604
Query: 85 NAIITGYWQNGFLQESKNLFQSM------PVKNIVS------------------------ 114
A+ITGY QNG +E+ LF M P + S
Sbjct: 605 TALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIR 664
Query: 115 ---WNCMIAGCIDNDR------IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
+ + +G + D +D+A F MPERN+ ++NA+IS + +G + A ++
Sbjct: 665 SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKM 724
Query: 166 FEQMPR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS-----WTVMITGYV 216
FE M + +++ ++L G D+ M + +S + +I
Sbjct: 725 FEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 784
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV-GMLENARLLFERI---QPKDCVSF 272
+ F + +++ MP + + + T+++ C++ G E AR+ +++ +P D +
Sbjct: 785 RVGCFSQVQKMLVEMP-FKADPIIWTSILHS-CRIHGNQELARVAADKLFGMEPTDATPY 842
Query: 273 NAMIAGYAQNGVAEEA 288
+ YA+ G E+A
Sbjct: 843 VILSNIYARAGQWEDA 858
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 195/585 (33%), Positives = 321/585 (54%), Gaps = 24/585 (4%)
Query: 17 FPPILR-ILSTPDSCGNFTPHSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
FPP+L+ LS D +C ++++ V+V + I SR G + A ++F
Sbjct: 153 FPPVLKACLSLADG------EKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFV 206
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCID-NDRID 129
M +DV +WNA+I+G+ QNG + E+ + M + + V+ + M+ C ND +
Sbjct: 207 DMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVG 266
Query: 130 DAFDYFQAMP---ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
+ + E + NA+I+ + K GRL++A R+F+ M R+++S+ +++ + +
Sbjct: 267 GVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQ 326
Query: 187 KGEVDKARALSDYMSFKNV------VSWTVMITGYVKNERFCEARELFY-RMPDYDKNVF 239
+ A M F + V I G + + R A F R + ++
Sbjct: 327 NDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIV 386
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-M 298
+ A++ + K+G ++ AR +FE++ +D +S+N +I GYAQNG+A EA+ ++ M +
Sbjct: 387 IGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGR 446
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ P+ T VS+ A S + L +G + H +I+N +V V +I MY +CG + D+
Sbjct: 447 TIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDA 506
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F +I V WN II++ HGH EKAL F M +G D ITF+SLLSAC H+
Sbjct: 507 MSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHS 566
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V+E+ F+ M K Y I P+ +HY C+VD+ RAG LEKA+ + MP +AD +WG+
Sbjct: 567 GLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGT 626
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LLAAC I+ N ELG A+ ++ E+D +N YV+LSN+YA G W +VR L +++G+
Sbjct: 627 LLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGL 686
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
K +S + +G+ V F G+ SHP +I+ EL+ + +MKS+
Sbjct: 687 RKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSL 731
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 225/487 (46%), Gaps = 57/487 (11%)
Query: 66 ISAARQLFDQM----TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
I+ A+QL + +DV+ ++T Y G L S F+ + KNI SWN M++
Sbjct: 64 INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSA 123
Query: 122 CIDNDRIDDAFDY-------------FQAMP------------------------ERNTA 144
+ R D+ D F P E +
Sbjct: 124 YVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDVY 183
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
++I + + G +E A ++F MP R+V S+ AM+ GF + G V +A + D M +
Sbjct: 184 VAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEE 243
Query: 205 VVSWTVMITGYVKNERFCEAR---------ELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
V TV ++ + C L+ + +VFV A+I + K G L+
Sbjct: 244 VKMDTVTVSSMLP---ICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQ 300
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A+ +F+ ++ +D VS+N++IA Y QN AL F M+ + M+PD T+VS+ +
Sbjct: 301 DAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFG 360
Query: 316 ALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
L GR H V+R E ++ + NA++ MY++ G I + F Q+ S +++SWN
Sbjct: 361 QLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWN 420
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
T+I +AQ+G +A+ ++ M P+ T++S+L A H G + + M + ++K
Sbjct: 421 TLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIK 480
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+ TCL+D+ + G+LE A + +P E W +++++ I+ + E
Sbjct: 481 -NCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVP-WNAIISSLGIHGHGEKAL 538
Query: 494 LAAKKMR 500
K MR
Sbjct: 539 QLFKDMR 545
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
VF +C+ + N +Q H L++ G +V + ++T+Y+ G + S F+ I N
Sbjct: 57 VFRSCTNI---NVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQ-MGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
+ SWN++++A+ + G Y ++ ++ + L+G PD TF +L AC E M +
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD-GEKMHCW 172
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
L + G L+ + SR G +E A ++ MP D G W ++++ N N
Sbjct: 173 VLKM---GFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMISGFCQNGN 228
Query: 489 VELGELAAKKMRELD 503
V A+ +R LD
Sbjct: 229 V------AEALRVLD 237
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 200/597 (33%), Positives = 313/597 (52%), Gaps = 78/597 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
F N+ IS L+++G + A +LF M D +WN++++G+ Q+ +ES F M
Sbjct: 81 TFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHR 140
Query: 110 KNIV----SWNCMIAGC---------------IDNDR--------------------IDD 130
++ + S+ ++ C + R +
Sbjct: 141 EDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVAC 200
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRR----NVISYTAM 180
A + F M ERN T+N++I+ + ++G EA +F +M P +V+S A
Sbjct: 201 AEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACAS 260
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
L +K+G AR + ++V ++ Y K + EAR +F RM +NV
Sbjct: 261 LCA-LKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI--RNVVS 317
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
T+M++G+ + ++ AR +F ++ ++ VS+NA+IAGY QNG EEALRLF + + +
Sbjct: 318 ETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESI 377
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
P T N ++++ V N++I MY +CG I D
Sbjct: 378 WPTHYTF------------------------GNLLKSDIFVGNSLIDMYMKCGSIEDGSR 413
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++ + VSWN II +AQ+G+ +AL F +M + G PD +T + +L AC HAG
Sbjct: 414 VFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGL 473
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
V E F ++ +G+IP +HYTC+VD+L RAG L +A + + MP D VWGSLL
Sbjct: 474 VEEGRHYF-FSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLL 532
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
AAC ++ N+E+G+ AA+K+ E+DP NS YV+LSN+YA G W DV RVR LM++QGVTK
Sbjct: 533 AACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTK 592
Query: 541 QCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSWSSFD 597
Q SWIE+ ++VH FL D SHP +I+ LK + QMK V ++ A + ++D
Sbjct: 593 QPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRV-GYIPDANDFEAYD 648
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 139/257 (54%), Gaps = 2/257 (0%)
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+I Y K + +AR+LF RMP +N F ++I+ K G L+ A LF + D
Sbjct: 56 LIDVYGKCDCLDDARKLFDRMPQ--RNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQC 113
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+N+M++G+AQ+ EE+L F M + D ++ + S +AC+ L LN G Q H LV
Sbjct: 114 SWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV 173
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ + +V + +A+I MYS+CG + +E F + NLV+WN++I + Q+G +AL
Sbjct: 174 SKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEAL 233
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F +M +G +PD +T S++SAC + E + + +VK LVD+
Sbjct: 234 EVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDM 293
Query: 451 LSRAGQLEKAWQITQGM 467
++ ++ +A ++ M
Sbjct: 294 YAKCSKVNEARRVFDRM 310
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 45/224 (20%)
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
G+++ P+ + + +C + R H ++ F + + N +I +Y +C
Sbjct: 5 GLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCD 64
Query: 354 GILDSELAFRQIHSPNLVSWNTII-------------------------------AAFAQ 382
+ D+ F ++ N +WN++I + FAQ
Sbjct: 65 CLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQ 124
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
H +E++L +F +M F + +F S LSAC MDL + +V+ ++ S
Sbjct: 125 HDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGL------MDL-NMGTQVHALVSKSR 177
Query: 443 HYT------CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ T L+D+ S+ G + A ++ GM E + W SL+
Sbjct: 178 YSTDVYMGSALIDMYSKCGSVACAEEVFSGM-IERNLVTWNSLI 220
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 197/647 (30%), Positives = 318/647 (49%), Gaps = 119/647 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L + +V NA +S G + +A +F M+ +D +T+N +I G Q G+ +++
Sbjct: 274 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 333
Query: 101 KNLFQSM------PVKNIV----------------------------SWNCMIAGCIDN- 125
LF+ M P N + + N I G + N
Sbjct: 334 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 393
Query: 126 ----DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI--SYT- 178
I+ A DYF N +N M+ + L + R+F QM ++ YT
Sbjct: 394 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 453
Query: 179 ------------------------------------AMLDGFMKKGEVDKARALSDYMSF 202
++D + K G++D A + +
Sbjct: 454 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 513
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPD----------------------------- 233
K+VVSWT MI GY + +A F +M D
Sbjct: 514 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 573
Query: 234 --------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ ++ A++T + + G +E + L FE+ + D +++NA+++G+ Q+G
Sbjct: 574 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 633
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EEALR+F M + + ++ T S A S + +G+Q H ++ + G+++ VCNA+
Sbjct: 634 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 693
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I+MY++CG I D+E F ++ + N VSWN II A+++HG +AL F QM + P+
Sbjct: 694 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 753
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
+T + +LSAC H G V++ + FE M YG+ P EHY C+VD+L+RAG L +A + Q
Sbjct: 754 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 813
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW-- 523
MP + D VW +LL+ACV++ N+E+GE AA + EL+P++SA YV+LSNLYA + W
Sbjct: 814 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDA 873
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
RD+TR + MKE+GV K+ SWIE+ N +H F GD +HP D+IH
Sbjct: 874 RDLTRQK--MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 918
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 182/421 (43%), Gaps = 51/421 (12%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI 150
Y G L + +F MP + I +WN MI + I + F F M N
Sbjct: 90 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 149
Query: 151 SGFLKHGR--------LEEA-TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
SG L+ R +E+ R+ Q R + + ++D + + G VD AR + D +
Sbjct: 150 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 209
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------------- 233
K+ SW MI+G KNE EA LF M P
Sbjct: 210 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 269
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+ + +V A+++ + +G L +A +F + +D V++N +I G +Q G
Sbjct: 270 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 329
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
E+A+ LF M ++PD TL S+ ACSA L G+Q H + GF +N + A
Sbjct: 330 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 389
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ +Y++C I + F + N+V WN ++ A+ + F QM + P+
Sbjct: 390 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 449
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQ 462
T+ S+L C G + + ++K + + Y C L+D+ ++ G+L+ AW
Sbjct: 450 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA---YVCSVLIDMYAKLGKLDTAWD 506
Query: 463 I 463
I
Sbjct: 507 I 507
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 168/362 (46%), Gaps = 44/362 (12%)
Query: 142 NTATYNAMISGFLK-HGRLEEATRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARAL 196
N T ++ G LK +G L+E +L Q+ + + S + D ++ KG++ A +
Sbjct: 43 NHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKV 102
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----------------- 233
D M + + +W MI E LF RM P+
Sbjct: 103 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 162
Query: 234 YD---------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+D + V +I + + G ++ AR +F+ ++ KD S+ AMI+G
Sbjct: 163 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 222
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
++N EA+RLF M + + P SV +AC ++ L G Q H LV++ GF ++
Sbjct: 223 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 282
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
VCNA++++Y G ++ +E F + + V++NT+I +Q G+ EKA+ F +M L
Sbjct: 283 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 342
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+G +PD T SL+ AC G + L K+ G +++ L+++ ++ +E
Sbjct: 343 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALLNLYAKCADIE 401
Query: 459 KA 460
A
Sbjct: 402 TA 403
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 197/452 (43%), Gaps = 30/452 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N I SR G + AR++FD + KD +W A+I+G +N E+ LF M V
Sbjct: 184 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 243
Query: 112 IV----SWNCMIAGC--IDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEAT 163
I+ +++ +++ C I++ I + ++ TY NA++S + G L A
Sbjct: 244 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 303
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+F M +R+ ++Y +++G + G +KA L M + + + V C
Sbjct: 304 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA---CS 360
Query: 224 ARELFYRMPD---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
A +R + N + A++ + K +E A F + ++ V +N
Sbjct: 361 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 420
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
M+ Y + R+F M ++ P+ T S+ C L L G Q H +I+
Sbjct: 421 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 480
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F+ N VC+ +I MY++ G + + + ++VSW T+IA + Q+ +KAL F
Sbjct: 481 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 540
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
QM G D + + +SAC + E + V G LV + SR
Sbjct: 541 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRC 599
Query: 455 GQLEKAWQITQGMPFE----ADTGVWGSLLAA 482
G++E+++ + FE D W +L++
Sbjct: 600 GKIEESY-----LAFEQTEAGDNIAWNALVSG 626
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 2/188 (1%)
Query: 300 MQPDDATLVSVFTACSALQ-LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++P+ TL + C L+EGR+ H +++ G ++N + + Y G + +
Sbjct: 40 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 99
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F ++ + +WN +I A + F +M P+ TF +L AC
Sbjct: 100 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 159
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ ++ + G+ S+ L+D+ SR G ++ A ++ G+ + D W +
Sbjct: 160 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DHSSWVA 218
Query: 479 LLAACVIN 486
+++ N
Sbjct: 219 MISGLSKN 226
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 304/539 (56%), Gaps = 15/539 (2%)
Query: 59 ALSRAGKISAARQLFDQM--TTKDVITWNAIITG-YWQNGFLQESKNLFQSMPVKNIVSW 115
A + + A LF+Q+ TKD I+WN++I N F+ K LF MP +N +SW
Sbjct: 97 AYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVK-LFDEMPQRNSISW 155
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+I G + R+++A +F AMP +++ AT+NAM++G+ +GR+ +A RLF QMP R+
Sbjct: 156 TTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRD 215
Query: 174 VISYTAMLDGFMKKGEVDKARAL-SDYMSFKNV-VSWTVMITGYVKNER---FCEARELF 228
VIS+T+++ G + G+ +A + + F V +S T ++ G + F ++
Sbjct: 216 VISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIH 275
Query: 229 YRMPDYD----KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
M + + FV +++T + + +A +F K+ V + A++ G N
Sbjct: 276 CCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDK 335
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EAL +FS M++ ++ P++++ S +C L+ L +GR H I+ G E V N+
Sbjct: 336 HVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNS 395
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ MYS+CG I D+ F+ I N+VSWN++I AQHG AL+ F +M G + D
Sbjct: 396 LVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESD 455
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
IT LLSAC +G + ++ F + + + EHY C+VD+L R G++E+A +
Sbjct: 456 EITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALA 515
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
MP EA++ VW LL+AC ++ ++++ E AAK++ E++P SA YV+LSNLYA++ W
Sbjct: 516 TSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWL 575
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+V R+R+ MK G+ KQ SWI + H FL D SHP ++I+ +L V+++ +
Sbjct: 576 EVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLREL 634
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 153/383 (39%), Gaps = 69/383 (18%)
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARAL-----SDYMSF-------------------- 202
Q P+ + S +K ++D ARA+ S ++S
Sbjct: 51 QNPKSSSTSLNFTFLNHLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINL 110
Query: 203 --------KNVVSW-------------------------------TVMITGYVKNERFCE 223
K+ +SW T +I G++ R E
Sbjct: 111 FNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNE 170
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
A F MP DK+V AM+ G+C G + +A LF ++ +D +S+ ++I G +NG
Sbjct: 171 AERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNG 230
Query: 284 VAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS-- 340
+ +AL F M+ + TLV +A + + G Q H + + GF +
Sbjct: 231 KSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEF 290
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V +++T Y+ C + D+ F + N+V W ++ + + +AL FS+M
Sbjct: 291 VSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFN 350
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
P+ +F S L++C + + + +K+ G+ + LV + S+ G + A
Sbjct: 351 VVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKM-GLENAVYTGNSLVVMYSKCGFIGDA 409
Query: 461 WQITQGMPFEADTGVWGSLLAAC 483
+ +G+ E + W S++ C
Sbjct: 410 LCVFKGIC-EKNVVSWNSVIVGC 431
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 294/561 (52%), Gaps = 48/561 (8%)
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
T A++ Y + +++S +F +M N+VSWN MI G ND DAFD F
Sbjct: 203 TSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLR 262
Query: 138 M------PERNTATYNAMISGFLK--HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
M P+ T A G L+ + E + E N + TA++D K G
Sbjct: 263 MMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGS 322
Query: 190 VDKARAL--SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------------ 235
+ +AR++ S +++ + W MI+GY+++ +A ELF +M D
Sbjct: 323 LQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVF 382
Query: 236 --------------------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
V + A+ + K G LE+ R +F R++ +D
Sbjct: 383 NAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDL 442
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+S+ +++ Y+Q ++A+ +FS M + P+ T SV +C+ L LL G+Q H +
Sbjct: 443 ISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGI 502
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ + G + + + +A++ MY++CG + D++ F +I + + VSW IIA AQHG + A
Sbjct: 503 ICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDA 562
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F +M G +P+ +TFL +L AC H G V E + F+LM K YG++P EHY C+VD
Sbjct: 563 LQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVD 622
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+LSR G L A + MP E + VW +LL AC ++ NVELGELAA+K+ +NSA
Sbjct: 623 LLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSAT 682
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
YV+LSN Y +G ++D +R +MKEQGV K+ SWI + +H F GD HP DKI
Sbjct: 683 YVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKI 742
Query: 570 HLELKRASVQMKSVDDFVEIA 590
+ +L+ +++ S+DD +++
Sbjct: 743 YAKLEELKLKLISLDDVPDLS 763
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 219/468 (46%), Gaps = 73/468 (15%)
Query: 59 ALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VS 114
A S+ I AA +LFDQM+ ++ +W +I G +NG + F M + I +
Sbjct: 114 AYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFA 173
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
++ ++ CI D I+ N +I GF H +
Sbjct: 174 YSGILQICIGLDSIELG----------NMVHAQIVIRGFTSHTFVS-------------- 209
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--- 231
TA+L+ + K E++ + + + M+ NVVSW MITG+ N+ + +A +LF RM
Sbjct: 210 ---TALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGE 266
Query: 232 ---PD-------------------------------YDKNVFVVTAMITGFCKVGMLENA 257
PD D N V TA+I K G L+ A
Sbjct: 267 GVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEA 326
Query: 258 RLLFER--IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
R +F I + +NAMI+GY ++G E+AL LF+ M + D+ D T SVF A +
Sbjct: 327 RSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIA 386
Query: 316 ALQLLNEGRQSHVLVIRNGFEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
AL+ L+ G++ H I++G E N VS+ NAV Y++CG + D F ++ +L+SW
Sbjct: 387 ALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWT 446
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+++ A++Q ++KA+ FS M G P+ TF S+L +C + + + ++ KV
Sbjct: 447 SLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKV 506
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G+ + LVD+ ++ G L A ++ + ADT W +++A
Sbjct: 507 -GLDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAG 552
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 175/358 (48%), Gaps = 23/358 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQ--MTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
V A I S+ G + AR +F+ +T + WNA+I+GY ++GF +++ LF M
Sbjct: 308 LVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMC 367
Query: 109 VKNIV--------SWNCMIA-GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+I +N + A C+ + A + + NA+ + + K G L
Sbjct: 368 QNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSL 427
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG-YVKN 218
E+ ++F +M R++IS+T+++ + + E DKA + M + + + V
Sbjct: 428 EDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSC 487
Query: 219 ERFC------EARELFYRMP-DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
C + + ++ D DK + +A++ + K G L +A+ +F RI D VS
Sbjct: 488 ANLCLLEYGQQVHGIICKVGLDMDK--CIESALVDMYAKCGCLGDAKKVFNRISNADTVS 545
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ A+IAG+AQ+G+ ++AL+LF M+++ ++P+ T + V ACS L+ EG Q L+
Sbjct: 546 WTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMK 605
Query: 332 RN-GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ G + ++ + SR G + D+ E R PN + W T++ A HG+ E
Sbjct: 606 KTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 195/479 (40%), Gaps = 101/479 (21%)
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD--- 233
+ K ++D A L D MS +N SWTV+I G +N F + E F M PD
Sbjct: 114 AYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFA 173
Query: 234 ----------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+ + FV TA++ + K+ +E++ +F +
Sbjct: 174 YSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT 233
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+ VS+NAMI G+ N + +A LF M+ + PD T + V A L+ +N+ ++
Sbjct: 234 EVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKE 293
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS------WNTIIAA 379
+ G ++N V A+I M S+CG + ++ R I + + ++ WN +I+
Sbjct: 294 VSGYALELGVDSNTLVGTALIDMNSKCGSLQEA----RSIFNSHFITCRFNAPWNAMISG 349
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG-----------HAGKVNESMDL- 427
+ + G EKAL F++M N D T+ S+ +A HA + +++
Sbjct: 350 YLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVN 409
Query: 428 -----------------FELMVKVYGIIPSSE--HYTCLVDILSRAGQLEKAWQITQGMP 468
E + KV+ + + +T LV S+ + +KA +I M
Sbjct: 410 YVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMR 469
Query: 469 FEA---DTGVWGSLLAACVINLNVELGE----LAAKKMRELDPQNSAVYVMLSNLYAAAG 521
E + + S+L +C +E G+ + K ++D + L ++YA G
Sbjct: 470 AEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDK---CIESALVDMYAKCG 526
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
D +V ++ SW I + G H +D L+L R VQ+
Sbjct: 527 CLGDAKKVF-----NRISNADTVSWTAI-------IAGHAQHGIVDDA-LQLFRRMVQL 572
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 106/236 (44%), Gaps = 12/236 (5%)
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC--NAVITMYSRCGGI 355
+ +QP LV + C + L + + H ++++ F + S+ N V YS+C I
Sbjct: 66 LQIQP----LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDI 121
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F Q+ N SW +IA A++G + FF +M G PD + +L C
Sbjct: 122 DAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQIC 181
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ E ++ + + G + T L+++ ++ ++E ++++ M E +
Sbjct: 182 IGLDSI-ELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT-EVNVVS 239
Query: 476 WGSLLAACVIN-LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
W +++ N L ++ +L + M E ++ ++ ++ A GM RDV + +
Sbjct: 240 WNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAK---AIGMLRDVNKAK 292
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
YV ++NA +A ++ G + R++F++M +D+I+W +++T Y Q ++ +F
Sbjct: 406 LEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIF 465
Query: 105 QSMPVKNIV----SWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISG 152
+M + I +++ ++ C + + +Y Q + + + +A++
Sbjct: 466 SNMRAEGIAPNQFTFSSVLVSCANLCLL----EYGQQVHGIICKVGLDMDKCIESALVDM 521
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
+ K G L +A ++F ++ + +S+TA++ G + G VD A L
Sbjct: 522 YAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQL 565
>gi|302764988|ref|XP_002965915.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
gi|300166729|gb|EFJ33335.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
Length = 912
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 294/526 (55%), Gaps = 11/526 (2%)
Query: 57 ISALSRAGKISAARQLFDQMTTKD-VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
+SA SR G + AR++FD+ +D ++WNA+++ Y Q G L +++ F+ MP ++V+W
Sbjct: 302 LSAYSRHGLVEEARRIFDRAARRDDEVSWNALLSAYAQAGHLHLARSTFERMPRHDVVAW 361
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
+IA N ++++A + +PER+ + A+I + +G+L E+ R++ MP RN +
Sbjct: 362 TALIAVSGQNGQLEEAEVLYDLIPERDLVAWTALIQAYGVNGKLTESKRVYALMPERNRV 421
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
S+TAM+ + + GEV +AR + D + + + T MI Y +N +ARE+F + + D
Sbjct: 422 SHTAMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPD 481
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
V AM+ + ML++A+ +F+ I+ K VS+N M+A YAQ G +EA +F +
Sbjct: 482 --VIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSI 539
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++ + +V A + L E R+ + + E + A++ M ++ G +
Sbjct: 540 PHKNVVSHNVMIV----AYAHNMDLAEARR----IFYSMDEKDTVTWTAMVAMVAQHGRL 591
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+++ F ++ N+VSWN++IA A GH A+ + M G PD ITF+ +L AC
Sbjct: 592 AEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIAC 651
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
H G V E F M +G+IP EHY +VD+L RAGQL A ++ + MPF D G
Sbjct: 652 SHVGLVEEGWTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGA 711
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WGSLL +C + +V+LG AA+ + + D Q+S YV+L+N+Y++ G D VR MK
Sbjct: 712 WGSLLGSCKTHSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNRMKA 771
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+GV KQ S I + +H F+ G+ SHP +I EL R MK
Sbjct: 772 RGVKKQPGVSLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMK 817
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 213/439 (48%), Gaps = 54/439 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF + A S G + +A+ +FDQ+ + +V++WN++I G+ Q+GF+ + +F MP
Sbjct: 78 VFSRCILMQAYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPR 137
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ SWN MI G + + A F PE N ++NA+I+G+ + + EA +F++
Sbjct: 138 WSSSSWNSMITGYAQSGDLASATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVFDRA 197
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P R+ IS+ AML + + G++D A+ + D +++VS T+MI E A E+F
Sbjct: 198 PGRDKISWNAMLTAYAQSGDLDSAKEVFDRTPQQDIVSCTLMIKACAVQEILGHAVEIFA 257
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
MP D+N + MI + G + A L R+ +D + +M++ Y+++G+ EEA
Sbjct: 258 AMP--DRNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVEEAR 315
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
R+F + D D+ + NA+++ Y
Sbjct: 316 RIFDRAARRD---DEVSW-----------------------------------NALLSAY 337
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++ G + + F ++ ++V+W +IA Q+G E+A + + + + D + +
Sbjct: 338 AQAGHLHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLYDLIP----ERDLVAWT 393
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH--YTCLVDILSRAGQLEKAWQITQGM 467
+L+ A G GK+ ES +VY ++P +T ++ S+ G++ +A ++ +
Sbjct: 394 ALIQAYGVNGKLTESK-------RVYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTL 446
Query: 468 PFEADTGVWGSLLAACVIN 486
P + D S++ A N
Sbjct: 447 P-DPDQSTRTSMIVAYAQN 464
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 156/332 (46%), Gaps = 64/332 (19%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA +SA ++AG + AR F++M DV+ W A+I QNG L+E++ L+ +P +++V
Sbjct: 331 NALLSAYAQAGHLHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLYDLIPERDLV 390
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI----------------------- 150
+W +I N ++ ++ + MPERN ++ AMI
Sbjct: 391 AWTALIQAYGVNGKLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPDPD 450
Query: 151 -------------SGFLKHGR--------------------------LEEATRLFEQMPR 171
+G++K R L+ A +F+ + +
Sbjct: 451 QSTRTSMIVAYAQNGYIKDAREMFDSIKNPDVIACNAMMEAYSSAQMLDHAKAMFDSIKQ 510
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
+ ++S+ M+ + + G +D+A+++ D + KNVVS VMI Y N EAR +FY M
Sbjct: 511 KTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVSHNVMIVAYAHNMDLAEARRIFYSM 570
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
+K+ TAM+ + G L A+ LF ++ ++ VS+N++IAG A G A+R
Sbjct: 571 D--EKDTVTWTAMVAMVAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRY 628
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
M +PD T + + ACS + L+ EG
Sbjct: 629 LYVMRNEGAKPDHITFMGILIACSHVGLVEEG 660
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 83/140 (59%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V NA + A S A + A+ +FD + K +++WN ++ Y Q G L E+K++F S+P
Sbjct: 482 VIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPH 541
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
KN+VS N MI N + +A F +M E++T T+ AM++ +HGRL EA LF +M
Sbjct: 542 KNVVSHNVMIVAYAHNMDLAEARRIFYSMDEKDTVTWTAMVAMVAQHGRLAEAQELFAKM 601
Query: 170 PRRNVISYTAMLDGFMKKGE 189
P RNV+S+ +++ G G
Sbjct: 602 PYRNVVSWNSLIAGMASCGH 621
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/566 (33%), Positives = 303/566 (53%), Gaps = 55/566 (9%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF-----LQESKNLFQSMPVKN 111
+ A S G + + +QL TTK N I G N + ++ + N F V+N
Sbjct: 379 VVACSSDGTLFSGQQLH-AYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVEN 437
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFE 167
+V WN M+ D + ++F F+ M N TY +++ ++ G LE ++
Sbjct: 438 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 497
Query: 168 QMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
Q+ + N + ++D + K G++D A + + K+VVSWT MI GY + +
Sbjct: 498 QIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK 557
Query: 224 ARELFYRMPD-------------------------------------YDKNVFVVTAMIT 246
A F +M D + ++ A++T
Sbjct: 558 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVT 617
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ K G +E A L FE+ + D +++NA+++G+ Q+G EEALR+F+ M + + ++ T
Sbjct: 618 LYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFT 677
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
S A S + +G+Q H ++ + G+++ VCNA+I+MY++CG I D++ F ++
Sbjct: 678 FGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELS 737
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
N VSWN +I A+++HG +AL F QM + P+ +T + +LSAC H G V++ ++
Sbjct: 738 MKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIE 797
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
FE M YG+ P EHY C+VD+L+RAG L +A MP E D VW +LL+ACV++
Sbjct: 798 YFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVH 857
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW--RDVTRVRLLMKEQGVTKQCAY 544
N+E+GE AA + EL+P++SA YV+LSNLYA W RD+TR + MKE+GV K+
Sbjct: 858 KNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQK--MKEKGVKKEPGQ 915
Query: 545 SWIEIGNKVHYFLGGDMSHPCIDKIH 570
SWIE+ N +H F GD +HP D+IH
Sbjct: 916 SWIEVKNSIHSFYVGDQNHPLADEIH 941
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 191/456 (41%), Gaps = 55/456 (12%)
Query: 60 LSRAGKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
L G + R+L Q+ + ++ Y G L + +F MP + I +W
Sbjct: 78 LKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTW 137
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR--------LEEA-TRLF 166
N MI F F M N SG L+ R +E+ R+
Sbjct: 138 NKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARII 197
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
Q ++ I ++D + + G VD+AR + D + K+ SW MI+G KNE EA
Sbjct: 198 YQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIR 257
Query: 227 LFYRM------PD-------------------------------YDKNVFVVTAMITGFC 249
LF M P + + +V A+++ +
Sbjct: 258 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 317
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
+G L +A +F + +D V++N +I G +Q G E+A+ LF M ++PD TL S
Sbjct: 318 HLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLAS 377
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ ACS+ L G+Q H + GF +N + A++ +Y++C I + F + N
Sbjct: 378 LVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVEN 437
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+V WN ++ A+ + F QM + P+ T+ S+L C G + +
Sbjct: 438 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 497
Query: 430 LMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQI 463
++K + + Y C L+D+ ++ G+L+ AW I
Sbjct: 498 QIIKTSFQLNA---YVCSVLIDMYAKLGKLDTAWDI 530
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 174/365 (47%), Gaps = 15/365 (4%)
Query: 108 PVKNIVSWNCMIAGCID-NDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEA 162
P + W ++ GC+ N +D+ + + N ++ +L G L+ A
Sbjct: 65 PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER-- 220
++F++MP R + ++ M+ + K L M +NV +G ++ R
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182
Query: 221 ---FCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
F ++ R+ K+ V +I + + G ++ AR +F+ + KD S+ AM
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAM 242
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+G ++N EA+RLF M + + P SV +AC ++ L G Q H LV++ GF
Sbjct: 243 ISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 302
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++ VCNA++++Y G ++ +E F + + V++NT+I +Q G+ EKA+ F +
Sbjct: 303 SSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 362
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M L+G +PD T SL+ AC G + L K+ G + + L+++ ++
Sbjct: 363 MQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKL-GFASNDKIEGALLNLYAKCS 421
Query: 456 QLEKA 460
+E A
Sbjct: 422 DIETA 426
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 197/449 (43%), Gaps = 24/449 (5%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N I SR G + AR++FD + KD +W A+I+G +N E+ LF M V
Sbjct: 207 VCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLG 266
Query: 112 IV----SWNCMIAGC--IDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEAT 163
I+ +++ +++ C I++ I + ++ TY NA++S + G L A
Sbjct: 267 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAE 326
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGYVKNE 219
+F M +R+ ++Y +++G + G +KA L M + + ++ +
Sbjct: 327 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDG 386
Query: 220 RFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
++L + + N + A++ + K +E A F + ++ V +N M+
Sbjct: 387 TLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLV 446
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
Y + R+F M ++ P+ T S+ C L L G Q H +I+ F+
Sbjct: 447 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQL 506
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
N VC+ +I MY++ G + + + ++VSW T+IA + Q+ +KAL F QM
Sbjct: 507 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 566
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
G D + + +SAC + E + V G LV + S+ G +
Sbjct: 567 DRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSKCGNI 625
Query: 458 EKAWQITQGMPFE----ADTGVWGSLLAA 482
E+A+ + FE D W +L++
Sbjct: 626 EEAY-----LAFEQTEAGDNIAWNALVSG 649
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
Query: 300 MQPDDATLVSVFTACSALQ-LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++P+ TL + C L+EGR+ H +++ GF+ N + ++ Y G + +
Sbjct: 63 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F ++ + +WN +I A K F +M P+ TF +L AC
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ ++ + G+ S+ L+D+ SR G +++A ++ G+ + D W +
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGL-YLKDHSSWVA 241
Query: 479 LLAACVIN 486
+++ N
Sbjct: 242 MISGLSKN 249
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 322/580 (55%), Gaps = 18/580 (3%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-VFVNNAKISALSRAGKISAARQLFDQ 75
FP +L+ T + +CL F + V+V + I SR + AR LFD+
Sbjct: 156 FPSVLKACRTV-----IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI---DNDRIDDAF 132
M +D+ +WNA+I+GY Q+G +E+ L + + V+ +++ C D +R
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 133 DY-FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
Y + E N +I + + GRL + ++F++M R++IS+ +++ + +
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 192 KARALSDYMSFKNV------VSWTVMITGYVKNERFCEARELF-YRMPDYDKNVFVVTAM 244
+A +L M + + I + + R C + + F R + +++ + A+
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPD 303
+ + K+G++++AR +F + D +S+N +I+GYAQNG A EA+ +++ M + ++ +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
T VSV ACS L +G + H +++NG +V V ++ MY +CG + D+ F
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
QI N V WNT+IA HGH EKA++ F +M G PD ITF++LLSAC H+G V+E
Sbjct: 511 QIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
FE+M YGI PS +HY C+VD+ RAGQLE A + + M + D +WG+LL+AC
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
++ NV+LG++A++ + E++P++ +V+LSN+YA+AG W V +R + +G+ K
Sbjct: 631 RVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG 690
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+S +E+ NKV F G+ +HP ++++ EL ++K +
Sbjct: 691 WSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
>gi|297828249|ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
gi|297327846|gb|EFH58266.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
Length = 606
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/473 (37%), Positives = 267/473 (56%), Gaps = 23/473 (4%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA 148
TG W + FLQ NC+I + + A F MP+R++ +YN+
Sbjct: 143 TGLWSDLFLQ-----------------NCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNS 185
Query: 149 MISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNV 205
MI+G++K G +E A LF+ MPR +N+IS+ +M+ G+ + E V+ A L M K++
Sbjct: 186 MINGYVKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSEGVNIASKLFAEMPEKDL 245
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+SW MI GYVK+ R +A+ LF MP D V MI G+ K+G + A+ LF+++
Sbjct: 246 ISWNSMIDGYVKHGRIEDAKGLFDVMPRRD--VVTCATMIDGYAKLGFVHQAKTLFDQMP 303
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGR 324
+D V++N+M+AGY QN EAL +F+ M K + PD+ TLV + +A + L L++
Sbjct: 304 LRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKAT 363
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H+ ++ F + A+I MYS+CG I + L F I + ++ WN +I A HG
Sbjct: 364 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAVHG 423
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P +HY
Sbjct: 424 LGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 483
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+VDILSR+G +E A + + MP E + +W + L AC + E GEL AK +
Sbjct: 484 GCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAG 543
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ GMW+DV RVR +MKE+ + K SWIE+ +VH F
Sbjct: 544 YNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFF 596
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 214/408 (52%), Gaps = 50/408 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + ARQ+FD+M +D +++N++I GY + G ++ ++ LF MP
Sbjct: 149 LFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYVKCGLIESARELFDLMPR 208
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+KN++SWN MI+G ++ ++ A F MPE++ ++N+MI G++KHGR+E+A LF
Sbjct: 209 EMKNLISWNSMISGYAQTSEGVNIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLF 268
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ MPRR+V++ M+DG+ K G V +A+ L D M ++VV++ M+ GYV+N+ EA E
Sbjct: 269 DVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALE 328
Query: 227 LFYRM-------PD--------------------YDKNVFVV-----------TAMITGF 248
+F M PD D ++++V A+I +
Sbjct: 329 IFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMY 388
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G +++A L+FE I+ K +NAMI G A +G+ E A + + ++ + PDD T V
Sbjct: 389 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAVHGLGESAFNMLLQIERLSIIPDDITFV 448
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SR G I ELA I
Sbjct: 449 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSI---ELAKNLIEE 505
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLS 410
PN V W T + A + H +E + + L G++P LS
Sbjct: 506 MPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLS 553
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 140/309 (45%), Gaps = 44/309 (14%)
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F R ++F+ +I + K G L AR +F+R+ +D VS+N+MI GY + G+ E
Sbjct: 139 FLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYVKCGLIES 198
Query: 288 ALRLFSGMIKMDMQPDD-ATLVSVFTACSALQLLNEG----------------------- 323
A LF D+ P + L+S + S +EG
Sbjct: 199 ARELF------DLMPREMKNLISWNSMISGYAQTSEGVNIASKLFAEMPEKDLISWNSMI 252
Query: 324 ----RQSHVLVIRNGFEA----NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+ + + F+ +V C +I Y++ G + ++ F Q+ ++V++N+
Sbjct: 253 DGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDVVAYNS 312
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
++A + Q+ + +AL F+ M PD T + +LSA G+++++ D+ +V+
Sbjct: 313 MMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATDMHLYIVEK 372
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
+ + L+D+ S+ G ++ A + +G+ ++ W +++ ++ LGE
Sbjct: 373 QFYL-GGKLGVALIDMYSKCGSIQHAMLVFEGIENKS-IDHWNAMIGGLAVH---GLGES 427
Query: 495 AAKKMRELD 503
A + +++
Sbjct: 428 AFNMLLQIE 436
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 157/372 (42%), Gaps = 80/372 (21%)
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F + +D +NA+I ++ +AL LF M++ + D +L V ACS L +
Sbjct: 71 FSPGEMEDPFLWNAVIKSHSHGKDPRQALLLFCLMLENGVSVDKFSLSLVLKACSRLGFV 130
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG--------------------------- 353
G Q H + + G +++ + N +I +Y +CG
Sbjct: 131 KGGMQIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGY 190
Query: 354 ---GILDS-----ELAFRQIHSPNLVSWNTIIAAFAQHGH-YEKALIFFSQMGLNGFDPD 404
G+++S +L R++ NL+SWN++I+ +AQ A F++M + D
Sbjct: 191 VKCGLIESARELFDLMPREM--KNLISWNSMISGYAQTSEGVNIASKLFAEMP----EKD 244
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQ 462
I++ S++ G++ ++ LF++M P + TC ++D ++ G + +A
Sbjct: 245 LISWNSMIDGYVKHGRIEDAKGLFDVM-------PRRDVVTCATMIDGYAKLGFVHQAKT 297
Query: 463 ITQGMPFEADTGVWGSLLAACVIN-LNVELGEL--AAKKMRELDPQNSAVYVMLSNLYAA 519
+ MP D + S++A V N ++E E+ +K L P + + ++LS + A
Sbjct: 298 LFDQMPLR-DVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAI-AQ 355
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG-------DMSHPCIDKIHLE 572
G T + L + E+ ++LGG DM C H
Sbjct: 356 LGRLSKATDMHLYIVEK-----------------QFYLGGKLGVALIDMYSKCGSIQHAM 398
Query: 573 LKRASVQMKSVD 584
L ++ KS+D
Sbjct: 399 LVFEGIENKSID 410
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 193/647 (29%), Positives = 307/647 (47%), Gaps = 110/647 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
V + +++ L ++G+++ A LFD+M K+V+ W ++++GY +NG + + +F M
Sbjct: 48 VVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVE 107
Query: 109 ---VKNIVSWNCMIAGCID-----------------------------------NDRIDD 130
N + N + C D +
Sbjct: 108 SGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPA 167
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM-------------------PR 171
A + F M + Y ++IS F ++G E A QM PR
Sbjct: 168 AKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPR 227
Query: 172 ------------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
++V S TA++D + + GE A+A+ D + KNVVSW M+
Sbjct: 228 VLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQ 287
Query: 214 GYVKNERFCEARELFYRM--PDYDKNVF-------------------------------- 239
Y+++ R EA ++F M D N F
Sbjct: 288 LYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIR 347
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V A+++ + + G++E + +I+ D VS+ I+ QNG E+A+ L M
Sbjct: 348 VSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEG 407
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
P+ SV ++C+ + L++G Q H L ++ G ++ + NA+I MYS+CG + +
Sbjct: 408 FTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSAR 467
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
LAF +H+ ++ SWN++I AQHG KAL FS+M NG PD TFL +L C H+G
Sbjct: 468 LAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSG 527
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
V E F LM+ Y P+ HY C++D+L R G+ ++A ++ MPFE D +W +L
Sbjct: 528 MVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTL 587
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
LA+C ++ N+++G+LAA ++ EL ++SA YV++SN+YA G W D +VR M E GV
Sbjct: 588 LASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVK 647
Query: 540 KQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDF 586
K SWIEI N+VH F DMSHP D I+ L M+ D+
Sbjct: 648 KDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQDFDEL 694
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 225/505 (44%), Gaps = 92/505 (18%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+Q V+ + A I SR G+ A+ +FD + K+V++W +++ Y ++G L+E+ +F
Sbjct: 243 LRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVF 302
Query: 105 QSMPVK----NIVSWNCMIAGC-------------IDNDRIDDAFDYFQAMPERNTATYN 147
M + N + + ++ C I +D I D N
Sbjct: 303 GDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITD------------IRVSN 350
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM------- 200
A++S + + G +EE + ++ +++S+T + + G +KA AL M
Sbjct: 351 ALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTP 410
Query: 201 ---SFKNVVSWTVMITGYVKNERF-CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+F +V+S + + +F C A +L D + A+I + K G + +
Sbjct: 411 NGYAFSSVLSSCADVASLDQGMQFHCLALKL-----GCDSEICTGNALINMYSKCGQMGS 465
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
ARL F+ + D S+N++I G+AQ+G A +AL +FS M ++PDD+T + V C+
Sbjct: 466 ARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNH 525
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
++ EG L R +I YS +P + +
Sbjct: 526 SGMVEEGE----LFFR-----------LMIDQYS---------------FTPAPSHYACM 555
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I ++G +++AL + M F+PD + + +LL++C K++ ++D+ +L
Sbjct: 556 IDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASC----KLHRNLDIGKLAADRLM 608
Query: 437 IIP--SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV-INLNVELGE 493
+ S Y + +I + G+ E A ++ + M +TGV A C I +N E+
Sbjct: 609 ELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMD---ETGVKKD--AGCSWIEINNEVHT 663
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYA 518
A++ M P + ++Y ML L A
Sbjct: 664 FASRDMSH--PNSDSIYQMLGELVA 686
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 39 NCL-IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CL ++L + NA I+ S+ G++ +AR FD M T DV +WN++I G+ Q+G
Sbjct: 435 HCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDA 494
Query: 98 QESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNA 148
++ +F M I ++ ++ GC + +++ +F+ M ++ + T Y
Sbjct: 495 NKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC 554
Query: 149 MISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDY---MSFKN 204
MI ++GR +EA R+ MP + + + +L +D + +D +S ++
Sbjct: 555 MIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRD 614
Query: 205 VVSWTVMITGYVKNERFCEARELFYRM 231
S+ +M Y + + +AR++ RM
Sbjct: 615 SASYVLMSNIYAMHGEWEDARKVRRRM 641
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 287/548 (52%), Gaps = 45/548 (8%)
Query: 35 PHSSNCLIRLFSTQYVFVNNAKIS----ALSRAGKISAARQLFDQMTT----KDVITWNA 86
P + L+ L F + +S A SR G + Q+ + D+ N
Sbjct: 108 PKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNC 167
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTA 144
+I+ Y + G L + +F MP ++ VS+N MI G + RID A F +P ERN
Sbjct: 168 LISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLI 227
Query: 145 TYNAMISGFLK-HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
++N++I G+ + + A +LF +MP R++IS+ +M+DG +K G ++ A+ L D M +
Sbjct: 228 SWNSLIRGYAQSEDGILVAWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNR 287
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
++VSW MI GY KN R AR LF MP+
Sbjct: 288 DIVSWANMIDGYAKNGRVDIARSLFDEMPE------------------------------ 317
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVSVFTACSALQLLNE 322
+D V++NAM+ GY QNG EAL +F GM + D+ATL+ +A + L +++
Sbjct: 318 ---RDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDK 374
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G H + GF + + A+I MYS+CG I ++ + F I ++ WN II A
Sbjct: 375 GVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAI 434
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG E A F +M +PD ITF+ LL+ACGHAG V E M FELM +V+ + P +
Sbjct: 435 HGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQ 494
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HY C+VDIL RAG +E+A + MPFE + +W SLL+AC + + +G+ A+ + L
Sbjct: 495 HYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESFNVGQPVAENLMRL 554
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
D + + YV+ SN+YA G W DV +VR +MK++ + K SWIE+ V+ F D S
Sbjct: 555 DSPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKS 614
Query: 563 HPCIDKIH 570
HP I+
Sbjct: 615 HPQFSGIY 622
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 142/305 (46%), Gaps = 27/305 (8%)
Query: 217 KNERFCEARELFYRM--PDYDKNVFVVTAMITGFC---KVGMLENARLLFERIQPKDCVS 271
K +R + ++ R+ + KN F+ T +I F ++E AR +F R +
Sbjct: 24 KCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFARFIFFRHHAFEFDE 83
Query: 272 -----------FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
+NA+I Y+ +EA+ L S M++ D TL V ACS + L+
Sbjct: 84 KEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLV 143
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
EG Q H L+ + F +++ + N +I+ Y +CG ++ + F ++ + VS+N++I +
Sbjct: 144 KEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGY 203
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
+ G + A + F + L + + I++ SL+ G+A +S D + +++ +P
Sbjct: 204 VKGGRIDLARVVFDCIPLE--ERNLISWNSLIR--GYA----QSEDGILVAWQLFAKMPE 255
Query: 441 SE--HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
+ + ++D + G++E A + MP D W +++ N V++ +
Sbjct: 256 RDLISWNSMIDGCVKCGRMEDAQGLFDRMP-NRDIVSWANMIDGYAKNGRVDIARSLFDE 314
Query: 499 MRELD 503
M E D
Sbjct: 315 MPERD 319
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 294/526 (55%), Gaps = 16/526 (3%)
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF 132
F + TT I N +I Y++ G E++ +F M V+N+ SWN M+AG +++A
Sbjct: 93 FKRPTT---IVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNAR 149
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKG 188
F M E++ ++N ++ + K G EA L+ R N S+ +L +K
Sbjct: 150 KLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLK 209
Query: 189 EVDKARALSDYMS----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAM 244
E+ A+ + + N+V + ++ Y K AR LF M K++ T +
Sbjct: 210 ELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEM--LVKDIHAWTTI 267
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
++G+ K G + +A LF ++ K+ VS++A+I+GYA+N + EAL F+ M+K + P+
Sbjct: 268 VSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQ 327
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
T S AC+++ L G+Q H +IR F N V +++I MYS+CG + S F
Sbjct: 328 YTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHL 387
Query: 365 I-HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+ + ++V WNT+I+A AQ+GH EKA+ F+ M +G PD ITF+ +LSAC H+G V E
Sbjct: 388 MGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQE 447
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ F+ M +G+ P EHY CL+D+L RAG + + M + D VW +LL C
Sbjct: 448 GLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVC 507
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
I+ N+ELG A+++ EL PQ+SA YV L++LYA G W V +VR LM E+ + K+
Sbjct: 508 RIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERG 567
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEI 589
SWI++GNK H F+ D HP ++I+L L++ + + +DF+ I
Sbjct: 568 ISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTE--EDFLTI 611
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 136/284 (47%), Gaps = 36/284 (12%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
FS V + K+ L A ++ Q+ +++ ++I+ Y + G ++ ++ LF
Sbjct: 196 FSFAGVLILCVKLKELQLAKQVHG--QVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLF 253
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
M VK+I +W +++G ++ A + F MPE+N +++A+ISG+ ++ EA
Sbjct: 254 DEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALD 313
Query: 165 LFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
F +M + + ++++ L + + + Y +I Y +
Sbjct: 314 YFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGY-----------LIRTYFR--- 359
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK-DCVSFNAMIAGY 279
C N VV+++I + K GMLE + +F + K D V +N MI+
Sbjct: 360 -C--------------NTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISAL 404
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
AQNG E+A+++F+ M++ ++PD T + + +ACS L+ EG
Sbjct: 405 AQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEG 448
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 23/300 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ ++++ + A S+ G++ AR LFD+M KD+ W I++GY + G + + LF MP
Sbjct: 230 LVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPE 289
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATY----NAMISGFLKHGRL 159
KN VSW+ +I+G N +A DYF M PE+ T + A I+ LKHG+
Sbjct: 290 KNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAA-LKHGK- 347
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMITGYVKN 218
+ L R N I ++++D + K G ++ + + M K +VV W MI+ +N
Sbjct: 348 QVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQN 407
Query: 219 ERFCEARELFYRM------PDYDKNVFVVTAMI-TGFCKVGMLENARLLFERIQPKDCVS 271
+A ++F M PD + +++A +G + G+ + ++ D
Sbjct: 408 GHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEH 467
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ +I + G E L + + M +PDD ++ C + GR+ VI
Sbjct: 468 YACLIDLLGRAGCFVE---LVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVI 524
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/571 (32%), Positives = 308/571 (53%), Gaps = 23/571 (4%)
Query: 12 LKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQ 71
L +F IL++L + + C C+ +L FV A I A + G +++ARQ
Sbjct: 39 LNPFVFTTILKLLVSVE-CAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQ 97
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA 131
FD + KD+++W ++ Y +N Q+S LF M + + AG + +A
Sbjct: 98 AFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEA 157
Query: 132 FDYFQAMP--------ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
F +++ E + ++ + K G + R+FE+MP+ +VI ++ M+
Sbjct: 158 FSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISR 217
Query: 184 FMKK----------GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
+ + G++ +A L + +F +V+ I +N + +
Sbjct: 218 YAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASI----ENLQLGKQVHCHVLKVG 273
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D NVFV A++ + K G L+N+ LF + ++ V++N MI GY Q+G ++AL L+
Sbjct: 274 LDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYK 333
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M++ +Q + T SV AC++L + G Q H L ++ ++ +V V NA+I MY++CG
Sbjct: 334 NMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCG 393
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ L F + + +SWN +I+ ++ HG +AL F M P+ +TF+S+LS
Sbjct: 394 SIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILS 453
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC +AG ++ + F+ MV+ YGI P EHYTC+V +L R+G L+KA ++ + +P E +
Sbjct: 454 ACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNV 513
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
VW +LL ACVI+ +V+LG ++A+++ ++DPQ+ A +V+LSN+YA W V VR M
Sbjct: 514 KVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFM 573
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
K +GV K+ SWIE VHYF GD SHP
Sbjct: 574 KNKGVKKEPGLSWIENQGIVHYFSVGDTSHP 604
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 194/425 (45%), Gaps = 86/425 (20%)
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR------------------------- 172
MP+RNT ++ +I G+++ +L+E LF ++ R
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 173 --------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
N TA++D + G V+ AR D ++ K++VSWT M+ Y +N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 219 ERFCEARELFYRM------PD-------------------------------YDKNVFVV 241
+RF ++ +LF M P+ Y+ +++V
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
++ + K G + +FE + D + ++ MI+ YAQ+ + EA+ LF M + +
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P+ T SV +C++++ L G+Q H V++ G + NV V NA++ +Y++CG + +S
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F ++ + N V+WNT+I + Q G +KAL + M +T+ S+L AC +
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360
Query: 422 NESMDLFELMVK-VYG---IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
+ L +K +Y ++ ++ L+D+ ++ G ++ A ++ M E D W
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNA-----LIDMYAKCGSIKNA-RLVFDMLSERDEISWN 414
Query: 478 SLLAA 482
++++
Sbjct: 415 AMISG 419
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 307/557 (55%), Gaps = 31/557 (5%)
Query: 50 VFVNNAKISALSRAGKIS-AARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
V + A + + +S + QLF+ + ++ ++NAII GY ++ E+ +F+ +
Sbjct: 246 VVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQ 305
Query: 109 VKNI----VSWNCMIAGCI----DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ VS + C D + + +++ + N NA++ + K G L
Sbjct: 306 KSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALV 365
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM--------------SFKNVV 206
EA +FE+M R+ +S+ A++ + G +K +L +M K
Sbjct: 366 EACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACA 425
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
W + G + R ++R + FV A+I + K GM+E A L +R+
Sbjct: 426 GWQALNCGMEIHNRIIKSR--------MGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAE 477
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+ VS+NA+I+G++ +EEA + FS M++M + PD+ T ++ C+ L + G+Q
Sbjct: 478 QTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQI 537
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H +I+ +++ + + ++ MYS+CG + D +L F + + + V+WN ++ +AQHG
Sbjct: 538 HAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLG 597
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
E+AL F M L P+ TFL++L ACGH G V + + F M+ YG+ P EHY+C
Sbjct: 598 EEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSC 657
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VDI+ R+GQ+ KA ++ +GMPFEAD +W +LL+ C I+ NVE+ E AA + +L+P++
Sbjct: 658 VVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPED 717
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
SA YV+LSN+YA AGMW +VT++R +M+ G+ K+ SWIEI ++VH FL GD +HP
Sbjct: 718 SAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRS 777
Query: 567 DKIHLELKRASVQMKSV 583
+I+ L + +MK V
Sbjct: 778 KEIYENLDVLTDEMKWV 794
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 146/593 (24%), Positives = 242/593 (40%), Gaps = 105/593 (17%)
Query: 5 SYFHQTYLKRILFPPILRILSTPDS-CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRA 63
S + T K+ F I + S + C H+ L T VFV N I +
Sbjct: 33 SSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPT--VFVTNCLIQMYIKC 90
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
+ A ++FD M +D ++WNA++ GY G + ++ LF +MP C +
Sbjct: 91 SDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMP-----GTGCGVVELF 145
Query: 124 D--NDRIDDAFDYFQ-AMPERNTATYNAMISGFLKHG----------------------- 157
D R+ FD A+ ++ ++ G HG
Sbjct: 146 DFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK 205
Query: 158 ------RLEEATRLFEQMPR------------------RNVISYTAMLDGFMKKGEV-DK 192
L LF++M + +V+ TA LD +MK + D
Sbjct: 206 CCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDC 265
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY------------------ 234
+ L + + N+ S+ +I GY ++++ EA +F +
Sbjct: 266 SNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAV 325
Query: 235 -------------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
N+ V A++ + K G L A L+FE + +D VS+NA+
Sbjct: 326 IKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAI 385
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IA + QNG E+ L LF M++ M+PD+ T SV AC+ Q LN G + H +I++
Sbjct: 386 IAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRM 445
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ V A+I MYS+CG + +E ++ +VSWN II+ F+ E+A FS+
Sbjct: 446 GLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSK 505
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY--TCLVDILSR 453
M G DPD T+ ++L C + V + ++K S+ Y + LVD+ S+
Sbjct: 506 MLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE---LQSDAYISSTLVDMYSK 562
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
G ++ I + P D W +++ + LGE A K + +N
Sbjct: 563 CGNMQDFQLIFEKAP-NRDFVTWNAMVCGYAQH---GLGEEALKIFEYMQLEN 611
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 158/434 (36%), Gaps = 125/434 (28%)
Query: 221 FCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
C ++ RM ++ VFV +I + K L A +F+ + +D VS+NAM+ G
Sbjct: 58 LCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFG 117
Query: 279 YAQNGVAEEALRLFSGMI---------------KMDMQPDDATLVSVFTACSALQLLNEG 323
YA G A +LF M +M D T V +CS+L+ G
Sbjct: 118 YAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGG 177
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRC--------GGI-------------------- 355
Q H L ++ GF+ +V +A++ MY++C GG+
Sbjct: 178 IQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHA 237
Query: 356 ---------------LD-----------SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
LD S F + + NL S+N II +A+ +A
Sbjct: 238 LKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEA 297
Query: 390 LIFFSQMGLNGFDPDGITF---------------------LSLLSAC------------- 415
L F + +G D ++ LS+ S C
Sbjct: 298 LGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDM 357
Query: 416 -GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA-----WQITQGMPF 469
G G + E+ +FE MV + + ++ + G EK W + GM
Sbjct: 358 YGKCGALVEACLVFEEMVSRDAV-----SWNAIIAAHEQNGNEEKTLSLFVWMLQSGM-- 410
Query: 470 EADTGVWGSLLAAC----VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
E D +GS+L AC +N +E+ K LD S V + L ++Y+ GM
Sbjct: 411 EPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLD---SFVGIALIDMYSKCGMMEK 467
Query: 526 VTRVRLLMKEQGVT 539
++ + EQ V
Sbjct: 468 AEKLHDRLAEQTVV 481
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/526 (33%), Positives = 299/526 (56%), Gaps = 14/526 (2%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
ISALS + + A ++F+Q+ +V N++I + QN ++ +F M + + N
Sbjct: 58 ISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADN 117
Query: 117 C----MIAGCIDND---RIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRL--EEATRLF 166
++ C + ++ + + + NA+I + + G L +A +LF
Sbjct: 118 FTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLF 177
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
E+M R+ +S+ +ML G +K GE+ AR L D M ++++SW M+ GY + +A E
Sbjct: 178 EKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFE 237
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER--IQPKDCVSFNAMIAGYAQNGV 284
LF +MP+ +N + M+ G+ K G +E AR++F++ + K+ V++ +IAGYA+ G+
Sbjct: 238 LFEKMPE--RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGL 295
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
+EA RL M+ ++ D A ++S+ AC+ LL+ G + H ++ R+ +N V NA
Sbjct: 296 LKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNA 355
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ MY++CG + + F I +LVSWNT++ HGH ++A+ FS+M G PD
Sbjct: 356 LLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPD 415
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+TF+++L +C HAG ++E +D F M KVY ++P EHY CLVD+L R G+L++A ++
Sbjct: 416 KVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVV 475
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
Q MP E + +WG+LL AC ++ V++ + + +LDP + Y +LSN+YAAA W
Sbjct: 476 QTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWE 535
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V +R MK GV K S +E+ + +H F D SHP D+I+
Sbjct: 536 GVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 199/386 (51%), Gaps = 15/386 (3%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISA--ARQLFDQMTTKDVITWNAIITGYWQNGF 96
N + +L + ++V NA I SR G + A +LF++M+ +D ++WN+++ G + G
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH 156
L++++ LF MP ++++SWN M+ G + AF+ F+ MPERNT +++ M+ G+ K
Sbjct: 201 LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 157 GRLEEATRLFEQM--PRRNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVSWTVM 211
G +E A +F++M P +NV+++T ++ G+ +KG + +A L D M K + +
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 212 ITGYVKNERFCEARELFY---RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
I + + + N +V+ A++ + K G L+ A +F I KD
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
VS+N M+ G +G +EA+ LFS M + ++PD T ++V +C+ L++EG +
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG-IDYF 439
Query: 329 LVIRNGFE--ANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGH 385
+ ++ V ++ + R G + ++ + + PN+V W ++ A H
Sbjct: 440 YSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNE 499
Query: 386 YEKAL-IFFSQMGLNGFDPDGITFLS 410
+ A + + + L+ DP + LS
Sbjct: 500 VDIAKEVLDNLVKLDPCDPGNYSLLS 525
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 41/243 (16%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT 89
CG + L S + N+ + L +AG++ AR+LFD+M +D+I+WN ++
Sbjct: 165 CGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLD 224
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM--PERNTATYN 147
GY + + ++ LF+ MP +N VSW+ M+ G ++ A F M P +N T+
Sbjct: 225 GYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWT 284
Query: 148 AMISGFLKHGRLEEATRLFEQM-----------------------------------PRR 172
+I+G+ + G L+EA RL +QM R
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 173 NVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
N+ S A+LD + K G + KA + + + K++VSW M+ G + EA ELF
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 229 YRM 231
RM
Sbjct: 405 SRM 407
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 36/206 (17%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
LN+ +Q H +IR ++ + +I+ S C + F Q+ PN+ N++I A
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRA 91
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG-------------HAGKVNESMD 426
AQ+ +A FS+M G D T+ LL AC H K+ S D
Sbjct: 92 HAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSD 151
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQL--EKAWQITQGMPFEADTGVWGSLLAACV 484
++ +P++ L+D SR G L A ++ + M E DT W S+L
Sbjct: 152 IY---------VPNA-----LIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGGL- 195
Query: 485 INLNVELGELA-AKKMRELDPQNSAV 509
V+ GEL A+++ + PQ +
Sbjct: 196 ----VKAGELRDARRLFDEMPQRDLI 217
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/556 (34%), Positives = 293/556 (52%), Gaps = 80/556 (14%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG-CIDNDRIDDAFDY----------- 134
I+T Y+ L + ++F+S+ N +SWN MI G + +D I Y
Sbjct: 20 ILTPYFHG--LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPN 77
Query: 135 -------FQAMPERNTA--------------------TYNAMISGFLKHGRLEEATRLFE 167
F++ + A + ++IS + ++G +E+A ++F+
Sbjct: 78 SYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFD 137
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
R+V+SYTAM+ G+ +G +DKA+ + D + K+VVSW MI+GY + R+ EA EL
Sbjct: 138 TSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALEL 197
Query: 228 FYRM------PD-------------------------------YDKNVFVVTAMITGFCK 250
F M PD + N+ +V A+I + K
Sbjct: 198 FNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSK 257
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G +E A LFE +Q KD +S+N +I GYA +EAL +F M+K+ P+D T++S+
Sbjct: 258 CGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSI 317
Query: 311 FTACSALQLLNEGRQSHVLVIR--NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
AC+ L ++ GR HV + + G N S+ ++I MY++CG I + F I +
Sbjct: 318 LPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNK 377
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
+L S N +I FA HG + A S+M +G +PD ITF+ LLSAC HAG + +F
Sbjct: 378 SLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIF 437
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
+ M Y I P EHY C++D+L R+G ++A ++ M E D +WGSLL AC I+ N
Sbjct: 438 KSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKN 497
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
+ELGEL A+K+ +++P+N YV+LSN+YA + W DV RVR L+ ++G+ K S IE
Sbjct: 498 LELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIE 557
Query: 549 IGNKVHYFLGGDMSHP 564
I + VH FL GD HP
Sbjct: 558 IDSMVHEFLIGDKFHP 573
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 142/587 (24%), Positives = 254/587 (43%), Gaps = 134/587 (22%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
++ ++F + AK A +I A Q+ T D+ ++I+ Y QNG ++++ +F
Sbjct: 79 YTFPFLFKSCAKSKAAQEGKQIHA--QILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVF 136
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
+ +++VS+ MI G +D A F +P ++ ++NAMISG+ + GR +EA
Sbjct: 137 DTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALE 196
Query: 165 LFEQMPR--------------------------RNVISY-------------TAMLDGFM 185
LF +M + R + S+ A++D +
Sbjct: 197 LFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYS 256
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------ 233
K GE+++A L + + +K+V+SW +I GY EA +F M P+
Sbjct: 257 KCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLS 316
Query: 234 --------------------YDK-------NVFVVTAMITGFCKVGMLENARLLFERIQP 266
DK N + T++I + K G +E A +F+ I
Sbjct: 317 ILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILN 376
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K S NAMI G+A +G A+ A L S M K ++PDD T V + +ACS L + GR+
Sbjct: 377 KSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKI 436
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
F++ +T+ R P L + +I + G +
Sbjct: 437 --------FKS--------MTLDYRI--------------EPKLEHYGCMIDLLGRSGLF 466
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIPSSE-HY 444
++A + M + +PDG+ + SLL AC K++++++L EL+ K+ I P + Y
Sbjct: 467 KEAEELINSMTM---EPDGVIWGSLLKAC----KIHKNLELGELIAQKLMKIEPKNPGSY 519
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM--REL 502
L +I + + + + ++ + D G+ + C ++E+ + + + +
Sbjct: 520 VLLSNIYATSARWDDVARVRTLL---NDKGL--KKVPGCS---SIEIDSMVHEFLIGDKF 571
Query: 503 DPQNSAVYVMLS---NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
PQN +Y ML +L A G D + V M+E+ K+ A S+
Sbjct: 572 HPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEE--LKEGALSY 616
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/643 (30%), Positives = 318/643 (49%), Gaps = 115/643 (17%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK--- 110
N I S G + ARQ FD + K V+TWNAII GY Q G ++E+ LF+ M +
Sbjct: 100 NTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAME 159
Query: 111 -NIVSWNCMIAGC-----------------------------------IDNDRIDDAFDY 134
+I+++ ++ C + +D A
Sbjct: 160 PSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQV 219
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDG------- 183
F + +R+ +T+N MI G+ K G E+A +LF +M + N IS+ ++LDG
Sbjct: 220 FDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEAL 279
Query: 184 ----------------------------FMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
+M G ++ AR + D M ++VVSWTVMI GY
Sbjct: 280 AWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGY 339
Query: 216 VKNERFCEARELFYRM------PD-------------------------------YDKNV 238
+N +A LF M PD + ++
Sbjct: 340 AENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDL 399
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
V TA++ + K G +++AR +F+ + +D VS++AMI Y +NG EEA F M +
Sbjct: 400 LVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRN 459
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+++PD T +++ AC L L+ G + + I+ +++ V NA+I M + G I +
Sbjct: 460 NVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERA 519
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F + ++V+WN +I ++ HG+ +AL F +M F P+ +TF+ +LSAC A
Sbjct: 520 RYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRA 579
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E F ++ GI+P+ E Y C+VD+L RAG+L++A + MP + ++ +W +
Sbjct: 580 GFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWST 639
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LLAAC I N+++ E AA++ +P + AVYV LS++YAAAGMW +V +VR +M+ +GV
Sbjct: 640 LLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGV 699
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
K+ +WIE+ K+H F+ D SHP +I+ EL R +K
Sbjct: 700 RKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIK 742
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 138/286 (48%), Gaps = 5/286 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N++ + +I G + AR F+ ++ K V++NA+IAGYAQ G +EA LF M+
Sbjct: 95 NIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMV 154
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
M+P T + V ACS+ L G++ H VI+ GF ++ + A+++MY + G +
Sbjct: 155 DEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMD 214
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F ++ ++ ++N +I +A+ G EKA F +M GF P+ I+FLS+L C
Sbjct: 215 GARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCS 274
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
+ + + G++ T L+ + G +E A ++ M D W
Sbjct: 275 TPEALAWGKAVHAQCMNT-GLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVR-DVVSW 332
Query: 477 GSLLAACVINLNVE--LGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
++ N N+E G A + + P + Y+ + N A++
Sbjct: 333 TVMIRGYAENSNIEDAFGLFATMQEEGIQP-DRITYIHIINACASS 377
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D T V +F C L+ G+Q +I++G + N+ N +I ++S CG +L++ F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+ + +V+WN IIA +AQ GH ++A F QM +P ITFL +L AC +
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+ ++KV G + T LV + + G ++ A Q+ G+
Sbjct: 180 LGKEFHAQVIKV-GFVSDFRIGTALVSMYVKGGSMDGARQVFDGL 223
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 44/220 (20%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
++ V NA I+ + G I AR +F+ M +DV+TWN +I GY +G +E+ +LF M
Sbjct: 499 HIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRM- 557
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER---NTATYNAMISGFLKHGRLEEATRL 165
+ ER N+ T+ ++S + G +EE R
Sbjct: 558 -----------------------------LKERFRPNSVTFVGVLSACSRAGFVEEGRRF 588
Query: 166 FEQ-MPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMITG---YV 216
F + R ++ Y M+D + GE+D+A L + M K N W+ ++ Y
Sbjct: 589 FSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYG 648
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+ A E YD V+V + + + GM EN
Sbjct: 649 NLDVAERAAERCLMSEPYDGAVYVQLSHM--YAAAGMWEN 686
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 316/581 (54%), Gaps = 52/581 (8%)
Query: 57 ISALSRAGKISAARQLFDQMT----TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+SA + G + QL + D+I +++ Y + ++ + F + +NI
Sbjct: 369 LSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENI 428
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRL----EEATR 164
V WN M+ D + D+F+ F+ M N TY +++ G L + T
Sbjct: 429 VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTH 488
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+ + + NV + ++D + K G++ A + + +VVSWT MI GYV+++ F EA
Sbjct: 489 VIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEA 548
Query: 225 RELF----YRMPDYDKNVF---------------------------------VVTAMITG 247
+LF YR +D F + A+I+
Sbjct: 549 LQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISL 608
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ + G ++ A L FE+I K+ +S+N++++G AQ+G EEAL++F M++ + + + T
Sbjct: 609 YARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTY 668
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
S +A ++L + +G+Q H +V++ G+++ V N++I++Y++ G I D+ F +
Sbjct: 669 GSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSE 728
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N++SWN +I ++QHG +AL F +M + G P+ +TF+ +LSAC H G V E +D
Sbjct: 729 RNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDY 788
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
FE M K++ ++P SEHY C+VD+L RAGQL++A + + MP AD +W +LL+ACVI+
Sbjct: 789 FESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHK 848
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
N+E+GE AA + EL+P++SA YV++SN+YA + W R LMK++GV K+ SWI
Sbjct: 849 NIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWI 908
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHL---ELKRASVQMKSVDD 585
E+ N VH F GD HP ++I+ L R + ++ V D
Sbjct: 909 EVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQD 949
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/547 (24%), Positives = 236/547 (43%), Gaps = 117/547 (21%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
V N I S+ G I +A+++F+ + KD++TW A+I+G QNG +E+ LF M
Sbjct: 196 LVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHAS 255
Query: 111 NI------------------------------VSW---------NCMIAGCIDNDRIDDA 131
I + W N ++A + ++ A
Sbjct: 256 EIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISA 315
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR-------------------- 171
F M R+ +YN++ISG ++ G + A LF +M R
Sbjct: 316 ERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASV 375
Query: 172 -------------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
++I ++LD + K +V+ A +N+V W VM+
Sbjct: 376 GALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVML 435
Query: 213 TGYVKNERFCEARELFYRM------PD-------------------------------YD 235
Y + + ++ E+F +M P+ +
Sbjct: 436 VAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQ 495
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
NV+V + +I + K G L A + R+ D VS+ AMIAGY Q+ + EAL+LF M
Sbjct: 496 LNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEM 555
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+Q D+ S +AC+ ++ L +G+Q H GF A++S+ NA+I++Y+RCG I
Sbjct: 556 EYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRI 615
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++ LAF +I N +SWN++++ AQ G++E+AL F +M + + T+ S +SA
Sbjct: 616 QEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAA 675
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ + + +++K G E L+ + +++G + AW+ M E +
Sbjct: 676 ASLANIKQGQQIHSMVLKT-GYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVIS 733
Query: 476 WGSLLAA 482
W +++
Sbjct: 734 WNAMITG 740
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 167/327 (51%), Gaps = 20/327 (6%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM------ 200
++++ + +HG A ++F++ R+V S+ M+ F+ + + L M
Sbjct: 97 DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGIT 156
Query: 201 ----SFKNVVSWTV---MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
+F V+ V + YVK +R +Y +D + V +I + K G
Sbjct: 157 PNGYTFAGVLKACVGGDIAFNYVKQ---VHSRTFYY---GFDSSPLVANLLIDLYSKNGY 210
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+E+A+ +F I KD V++ AMI+G +QNG+ EEA+ LF M ++ P L SV +A
Sbjct: 211 IESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSA 270
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
+ +QL G Q H LVI+ GF + VCN ++ +YSR ++ +E F ++S + VS+
Sbjct: 271 STKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSY 330
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N++I+ Q G ++AL F++M + PD IT SLLSAC G +++ M L +K
Sbjct: 331 NSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIK 390
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKA 460
G+ L+D+ S+ +E A
Sbjct: 391 A-GMSADIILEGSLLDLYSKCADVETA 416
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 212/446 (47%), Gaps = 33/446 (7%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN-----LFQSMPVKNIVSWN 116
R G A ++FD+ + + V +WN +I + F+ + N LF+ M + I
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMI-----HVFVAQKSNFQVFCLFRRMLAEGITPNG 159
Query: 117 CMIAG----CIDNDRIDDAFDYFQAMPER--------NTATYNAMISGFLKHGRLEEATR 164
AG C+ D AF+Y + + R + N +I + K+G +E A +
Sbjct: 160 YTFAGVLKACVGGDI---AFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKK 216
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+F + ++++++ AM+ G + G ++A L M + +++ + +
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276
Query: 225 RELFYRMP------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
EL ++ + +V ++ + + L +A +F + +D VS+N++I+G
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
Q G ++ AL LF+ M + ++PD T+ S+ +AC+++ L++G Q H I+ G A+
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+ + +++ +YS+C + + F + N+V WN ++ A+ Q + + F QM +
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
G P+ T+ S+L C G + + ++K G + + L+D+ ++ GQL
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLA 515
Query: 459 KAWQITQGMPFEADTGVWGSLLAACV 484
A +I + +P E D W +++A V
Sbjct: 516 LALRILRRLP-EDDVVSWTAMIAGYV 540
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 62/154 (40%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ C L E + H + ++GF+ + ++++ Y R G + F + + +
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ SWN +I F + F +M G P+G TF +L AC +
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
YG S L+D+ S+ G +E A ++
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKV 217
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 299/556 (53%), Gaps = 30/556 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ ++N I + G++ A +FD+M ++V++W A++ G+ QNG ES LF M +
Sbjct: 7 LMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGL 66
Query: 110 KNI------VSWN---CMIAGCIDNDR------IDDAFDYFQAMPERNTATYNAMISGFL 154
+ S N C + +D R + FD + N++I +
Sbjct: 67 SGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVG-------NSIIDMYS 119
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM----SFKNVVSWTV 210
K GR+ EA +FE MP RN+IS+ AM+ G+ G +KA L M F + ++T
Sbjct: 120 KCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTS 179
Query: 211 MITGYVKNERFCEARELFYRMPD----YDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
+ E ++ + Y N V A+I + K G L AR +F I+
Sbjct: 180 TLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEE 239
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K +S+ A+I GYAQ G E++ LF + + +Q D L S+ + L+ +G+Q
Sbjct: 240 KHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQM 299
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H I+ ++SVCN+++ MY +CG I ++E F ++ + N++SW +I + +HG
Sbjct: 300 HAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLG 359
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++A+ F +M L+ +PD +T+L++L C H+G V + + F + +GI EHY C
Sbjct: 360 KEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYAC 419
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VD+L RAG+L++A + MP EA+ G+W +LL+AC ++ ++ELG+ + LD +N
Sbjct: 420 MVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSEN 479
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
YVM+SN+YA AG W++ R+R L+K + + K+ SW+EI +VH+F GGD +HP
Sbjct: 480 PVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLT 539
Query: 567 DKIHLELKRASVQMKS 582
+KIH LK +MK
Sbjct: 540 EKIHEILKEMERRMKE 555
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GF ++ + N +I MY +CG + + F ++ N+VSW ++ Q+G+ ++L+ F
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
S+MGL+G P+ TF + L ACG ++ + ++ VK G + ++D+ S+
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKT-GFDMVNVVGNSIIDMYSK 120
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
G++ +A + + MP + W +++A + E + +KM+E+
Sbjct: 121 CGRINEAACMFEVMPVR-NLISWNAMIAGYTVAGFCEKALVLFQKMQEV 168
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 202/630 (32%), Positives = 308/630 (48%), Gaps = 76/630 (12%)
Query: 19 PILRILSTPDSCGNFTP-HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT 77
P L +LST S N HS L +TQ+ + A+S G +S A LF+ +
Sbjct: 34 PSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF----- 132
+ WN +I G N S PV I + M+ ++ + F
Sbjct: 94 QPNQFIWNTMIRG-----------NSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSC 142
Query: 133 --------------DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYT 178
+ E + + ++I+ + ++G L A +F + R+ +S+T
Sbjct: 143 AKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFT 202
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD--- 235
A++ G+ +G +D AR L + + ++ VSW MI GY ++ RF EA F M +
Sbjct: 203 ALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAP 262
Query: 236 ----------------------------------KNVFVVTAMITGFCKVGMLENARLLF 261
N+ +V A+I + K G L+ AR LF
Sbjct: 263 NESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLF 322
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
E I KD +S+N MI GY+ +EAL LF M + +++P+D T VS+ AC+ L L+
Sbjct: 323 EGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALD 382
Query: 322 EGRQSHVLVIRNGFE-ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
G+ H + + N S+ ++I MY++CG I ++ F + +L SWN +I+
Sbjct: 383 LGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGL 442
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A HGH AL F QM GF+PD ITF+ +LSAC HAG V F MV+ Y I P
Sbjct: 443 AMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPK 502
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
+HY C++D+L RAG ++A + + M + D +WGSLL AC ++ NVELGE AAK +
Sbjct: 503 LQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLF 562
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
EL+P+N YV+LSN+YA AG W DV R+R + ++G+ K S IE+ + VH FL G
Sbjct: 563 ELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVG- 621
Query: 561 MSHPCIDKIHLELKRASVQMKSVDDFVEIA 590
DK+H + + + +D +E A
Sbjct: 622 ------DKVHEQSQDIYKMLDEIDQLLEKA 645
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/526 (33%), Positives = 288/526 (54%), Gaps = 31/526 (5%)
Query: 66 ISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI---- 119
+ ++R++FD + D N ++ Y G +++ F +MP ++ +++ +I
Sbjct: 400 LPSSRRVFDAIRDPHADAFLANTMLRAYALGGAPRDALAAFSAMPRRDSFTYSFLIKALS 459
Query: 120 -AGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYT 178
AG + ++ +T NA+I + K+G +A ++F++MP R+V+S+
Sbjct: 460 AAGVAPVRAVHSHVVKLGSV--EDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWN 517
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV 238
+ +++GE+ AR L D M K+ VSW ++ GY K A ELF RMP+ +NV
Sbjct: 518 TAMAAMVREGELAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPE--RNV 575
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
+ M++G+CK G LE AR++F+++ K+ V++ M M +
Sbjct: 576 VSWSTMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIM-------------------MKEA 616
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++ D A +VS+ AC+ L+ G++ H V + + VCNA+I M+ +CG + +
Sbjct: 617 SVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRA 676
Query: 359 ELAF-RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F + + VSWN+II FA HGH +KAL F+QM GF+PD +T +++LSAC H
Sbjct: 677 DYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTH 736
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
G V+E F M + YGI+P EHY C++D+L R G +++A + + MP+E + +WG
Sbjct: 737 MGFVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWG 796
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
SLL+AC ++ NVE E+A ++ +L P N+ Y +LSN+YA AG W D+ + R+ MK G
Sbjct: 797 SLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTG 856
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
K SW+E+ H F GD H D+I + R S +K V
Sbjct: 857 SQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVKHV 902
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 197/362 (54%), Gaps = 22/362 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L S + FV NA I A S+ G S AR++FD+M +DV++WN + + G L +
Sbjct: 473 VVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGA 532
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ LF MP K+ VSWN ++ G ++ AF+ FQ MPERN +++ M+SG+ K G LE
Sbjct: 533 RKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLE 592
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
A +F++MP +N++++T M MK+ V+ + VVS ++ ++
Sbjct: 593 MARVIFDKMPGKNLVTWTIM----MKEASVE--------LDVAAVVS---ILAACAESGS 637
Query: 221 FCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF--ERIQPKDCVSFNAMI 276
+ + + R + ++ V A+I FCK G + A +F E +Q KD VS+N++I
Sbjct: 638 LSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQ-KDSVSWNSII 696
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GF 335
G+A +G ++AL LF+ M + PD T+++V +AC+ + ++EGR+ + R+ G
Sbjct: 697 GGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGI 756
Query: 336 EANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ +I + R G I ++ +L PN V W ++++A H + E A I +
Sbjct: 757 MPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVN 816
Query: 395 QM 396
++
Sbjct: 817 EL 818
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 327/606 (53%), Gaps = 39/606 (6%)
Query: 11 YLKRI-LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYV--------FVNNAKISALS 61
Y+KR+ L +S +C + H CL R + FV NA + S
Sbjct: 291 YMKRLGLEADEFTYVSVLGACAHLDSH---CLGRQVQCVTIKNCMDASLFVANATLDMHS 347
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNC 117
+ G I A+ LF+ +T KD ++WNA++ G N +E+ ++ + M + + VS+
Sbjct: 348 KFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFAT 407
Query: 118 MIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
+I C N R + + + N A +++I + KHG +E ++ Q+
Sbjct: 408 VINAC-SNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDAS 466
Query: 173 NVISYTAMLDGFMKKGEVDKA-----RALSDYM-----SFKNVVSW-TVMITGYVKNERF 221
+++ ++ G ++ D+A + L D + +F +++S T +++ + +
Sbjct: 467 SIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVH 526
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENA-RLLFERIQPKDCVSFNAMIAGYA 280
C + + D V +++ + K M E+A +LL E K+ V + A+++GYA
Sbjct: 527 CYTLKSGFLNDDTSVGV----SLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYA 582
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
QNG + ++L F M D+ PD+ T S+ ACS + L++G++ H L+I++GF + +
Sbjct: 583 QNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKT 642
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVS-WNTIIAAFAQHGHYEKALIFFSQMGLN 399
+A+I MYS+CG I+ S AF+++ S ++ WN++I FA++G+ ++AL+ F +M +
Sbjct: 643 ATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDS 702
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
D +TFL +L AC HAG ++E F+ M KVYGI+P +HY C +D+L R G L++
Sbjct: 703 QIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQE 762
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
A ++ +PF D +W + LAAC ++ + E GE+AAK++ EL+PQNS+ YV+LSN+YAA
Sbjct: 763 AQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAA 822
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQ 579
AG W + R M+E+G TK SWI +GNK FL D +H +I+ L +
Sbjct: 823 AGNWVEAKMAREAMREKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLTRM 882
Query: 580 MKSVDD 585
M DD
Sbjct: 883 MHKYDD 888
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 204/425 (48%), Gaps = 44/425 (10%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F A ++ +R G++ AR++F ++ D + W ++I+GY + G QE+ LF M
Sbjct: 67 FCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRM--- 123
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+ + P+R T A++ GRLE+A L +MP
Sbjct: 124 ----------------------EKMGSSPDRVTCV--AVVCALTALGRLEDARTLLHRMP 159
Query: 171 R-RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV---------MITGYVKNER 220
+ +++ A++ G+ ++ ++ + +K++ W + M++
Sbjct: 160 APSSTVAWNAVISGYAQQSGIEHEV----FGLYKDMRCWGLWPTRSTFASMLSAAANATA 215
Query: 221 FCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
F E R++ + D NVFV +++I + K G + +A L+F+ K+ V +NAM+ G
Sbjct: 216 FIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNG 275
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
+N EA+++F M ++ ++ D+ T VSV AC+ L GRQ + I+N +A+
Sbjct: 276 LVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDAS 335
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+ V NA + M+S+ G I D++ F I + VSWN ++ + E+A+ M L
Sbjct: 336 LFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNL 395
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+G PD ++F ++++AC + + E+ + + I + + L+D S+ G +E
Sbjct: 396 DGVTPDEVSFATVINACSNI-RATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVE 454
Query: 459 KAWQI 463
++
Sbjct: 455 SCRKV 459
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 71/132 (53%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++PD L + +ACS L L G+Q+H + G + A++ MY+RCG + D+
Sbjct: 27 VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F I P+ V W ++I+ + + G +++A+ F++M G PD +T ++++ A G
Sbjct: 87 RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALG 146
Query: 420 KVNESMDLFELM 431
++ ++ L M
Sbjct: 147 RLEDARTLLHRM 158
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 186/519 (35%), Positives = 289/519 (55%), Gaps = 14/519 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVI----TWNAIITGYWQNGFLQESKN---- 102
F+ NA I + S A LF M V+ + + ++ + GF +E
Sbjct: 59 FLWNAVIKSHSHGADPRKALLLFCLMLENGVLVDKFSMSLVLKACSRLGFAKEGMQVHGF 118
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
L +S ++ NC+I + + A F MP+R++ +YN+MI G++K G +E A
Sbjct: 119 LIKSRTWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLVESA 178
Query: 163 TRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNVVSWTVMITGYVKNE 219
LF+ MPR RN+I++ +M+ G+ ++ + V+ A L D M K+++SW MI GYVK+
Sbjct: 179 GELFDLMPREKRNLITWNSMIGGYAQRADGVNVASKLFDEMPEKDLISWNSMIGGYVKHG 238
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
R +A+ LF MP D V MI G+ K+G++ A+ LF+++ +D V++N+M++G+
Sbjct: 239 RIEDAKGLFDVMPRRD--VVTWAIMIDGYGKLGLVHQAKTLFDQMPHRDVVAYNSMMSGF 296
Query: 280 AQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
QN EAL +F+ M K + PD+ TLV V +A + L L + H+ ++ F +
Sbjct: 297 VQNRYHIEALEVFNHMEKESHLSPDETTLVIVLSAIAQLGRLTKAIDMHLYIVEKRFLLS 356
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+ A+I MYS+CG I + F I S ++ WN +I A HG E A Q+
Sbjct: 357 GKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIER 416
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
PD ITF+ +L+AC H+G V E + FELM + + I P +HY C+VDIL+R+G +E
Sbjct: 417 RSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIE 476
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
A + + MP E + +W + L AC + E GEL AK + N + YV+LSN+YA
Sbjct: 477 LAKNLIEEMPIEPNDVIWRTFLNACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 536
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
+ GMW+DV RVR +MKE+ + K SWIE+ +VH FL
Sbjct: 537 SNGMWKDVRRVRTMMKEKKIEKLPGCSWIELDGRVHEFL 575
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 319/634 (50%), Gaps = 80/634 (12%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR F+ N + A + + AR++FD++ ++ +WN ++ Y + G + E
Sbjct: 32 IIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEM 91
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA--------------TY 146
++ F+ +P ++ V+WN +I G + + A + M +A +
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 147 NAMIS-GFLKHGR-------------------------LEEATRLFEQMPRRNVISYTAM 180
N +S G HG+ + +A ++F + RN + Y ++
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP-------- 232
+ G + G ++ A L M K+ VSW MI G +N EA E F M
Sbjct: 212 MGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 233 -----------------------------DYDKNVFVVTAMITGFCKVGMLENARLLFER 263
++ +++V +A+I +CK L A+ +F+R
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++ K+ VS+ AM+ GY Q G AEEA+++F M + + PD TL +AC+ + L EG
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
Q H I +G V+V N+++T+Y +CG I DS F +++ + VSW +++A+AQ
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G + + F +M +G PDG+T ++SAC AG V + F+LM YGI+PS H
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y+C++D+ SR+G+LE+A + GMPF D W +LL+AC N+E+G+ AA+ + ELD
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELD 570
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P + A Y +LS++YA+ G W V ++R M+E+ V K+ SWI+ K+H F D S
Sbjct: 571 PHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESS 630
Query: 564 PCIDKIHLELKRASVQMKSVDDFVEIATSWSSFD 597
P +D+I+ +L+ + K +D+ + TS+ D
Sbjct: 631 PYLDQIYAKLEE--LNNKIIDNGYKPDTSFVHHD 662
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 129/290 (44%), Gaps = 49/290 (16%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C+IR +++V +A I + + A+ +FD+M K+V++W A++ GY Q G +E
Sbjct: 295 CIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEE 354
Query: 100 SKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMIS 151
+ +F M I + I+ C + +++ + Y N++++
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVT 414
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ K G ++++TRLF +M R+ +S+TA M
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVSWTA-------------------------------M 443
Query: 212 ITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
++ Y + R E +LF +M + + +T +I+ + G++E + F+ + +
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 270 V-----SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ ++ MI ++++G EEA+R +G M PD ++ +AC
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFING---MPFPPDAIGWTTLLSAC 550
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 311/636 (48%), Gaps = 115/636 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV NA I+ R G A ++F M +D +T+N +I+G+ Q G + + +F+ M
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237
Query: 110 KNI----VSWNCMIAGC--------------------IDNDRI---------------DD 130
+ V+ + ++A C I +D I +
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVET 297
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAML----- 181
A F + N +N M+ F + L ++ LF QM R N +Y +L
Sbjct: 298 ALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTC 357
Query: 182 ------------------------------DGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
D + K G ++KAR + + + K+VVSWT M
Sbjct: 358 TREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSM 417
Query: 212 ITGYVKNERFCEARELFYRM------PD-------------------------------Y 234
I GYV++E +A F M PD Y
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+V + A++ + + G + A FE ++ KD ++ N +++G+AQ+G+ EEAL++F
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMR 537
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + ++ + T VS +A + L + +G+Q H VI+ G V NA+I++Y +CG
Sbjct: 538 MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGS 597
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
D+++ F ++ N VSWNTII + +QHG +AL F QM G P+ +TF+ +L+A
Sbjct: 598 FEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAA 657
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V E + F+ M YGI P +HY C++DI RAGQL++A + + MP AD
Sbjct: 658 CSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM 717
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VW +LL+AC ++ N+E+GE AAK + EL+P +SA YV+LSN YA W + +VR +M+
Sbjct: 718 VWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMR 777
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
++GV K+ SWIE+ N VH F GD HP ++I+
Sbjct: 778 DRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIY 813
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/551 (23%), Positives = 241/551 (43%), Gaps = 117/551 (21%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
+Y V N I S+ G + AR++F++++ +D ++W A+++GY QNG +E+ L++ M
Sbjct: 75 KYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQM 134
Query: 108 ------PVKNIVS---WNCMIAGCIDNDRIDDAFDY------------------------ 134
P ++S +C A R+ A Y
Sbjct: 135 HRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSF 194
Query: 135 ------FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP------------------ 170
F MP R+T T+N +ISG + G E A +FE+M
Sbjct: 195 RLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAAC 254
Query: 171 ---------------------RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+ I ++LD ++K G+V+ A + + NVV W
Sbjct: 255 ASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWN 314
Query: 210 VMITGYVKNERFCEARELFYRM------PD------------------------------ 233
+M+ + + ++ ELF +M P+
Sbjct: 315 LMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Query: 234 -YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
++ +++V +I + K G LE AR + E ++ KD VS+ +MIAGY Q+ ++AL F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M K + PD+ L S + C+ + + +G Q H + +G+ +VS+ NA++ +Y+RC
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC 494
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I ++ +F ++ + ++ N +++ FAQ G +E+AL F +M +G + TF+S L
Sbjct: 495 GRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SA + ++ + + ++K G +E L+ + + G E A M E +
Sbjct: 555 SASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEMS-ERN 612
Query: 473 TGVWGSLLAAC 483
W +++ +C
Sbjct: 613 EVSWNTIITSC 623
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 183/389 (47%), Gaps = 25/389 (6%)
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPE-------RNTATY----NAMISGFLKHGRLEE 161
+ + C + C N R +Q +PE R Y N +I + K+G +
Sbjct: 42 LDFACALRACRGNGR------RWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP 95
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS----WTVMITGYVK 217
A R+FE++ R+ +S+ AML G+ + G ++A L M VV + +++ K
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155
Query: 218 NERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E F + R + + + +FV A+IT + + G A +F + +D V+FN +
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTL 215
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+G+AQ G E AL +F M + PD T+ S+ AC++L L +G Q H + + G
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI 275
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++ + +++ +Y +CG + + + F N+V WN ++ AF Q K+ F Q
Sbjct: 276 SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ 335
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G P+ T+ +L C +++ + L VK G L+D+ S+ G
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYG 394
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACV 484
LEKA ++ + M E D W S++A V
Sbjct: 395 WLEKARRVLE-MLKEKDVVSWTSMIAGYV 422
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 192/640 (30%), Positives = 321/640 (50%), Gaps = 115/640 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V +A + + AG + AR FD + +D + WN ++ G + G + + LF++M
Sbjct: 176 VYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRA 235
Query: 110 K----NIVSWNCMIAGC-IDNDRI----------------------------------DD 130
N + C ++ C D D + DD
Sbjct: 236 SGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDD 295
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR------------------- 171
A+ F+ MP+ + T+N MISG +++G EA LF M R
Sbjct: 296 AWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTD 355
Query: 172 ---------------RNVIS-----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
RN ++ +A++D + K +V A+ L D +VV + M
Sbjct: 356 LNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTM 415
Query: 212 ITGYVKNERFCEARELFYRMPD-------------------------------------Y 234
I+GYV N EA ++F + + Y
Sbjct: 416 ISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAY 475
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
++ +V +A++ + K G L+ + +F ++ KD V++N+MI+ ++QNG +EAL LF
Sbjct: 476 ERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQ 535
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M ++ ++ T+ + +AC++L + G++ H + I+ +A++ +A+I MY++CG
Sbjct: 536 MCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGN 595
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F + N VSWN+II+A+ HG ++++ M G+ PD +TFL+L+SA
Sbjct: 596 LELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISA 655
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C HAG V E + LF+ M K Y I P EH+ C+VD+ SR+G+L+KA Q MPF+ D G
Sbjct: 656 CAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAG 715
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+WG+LL AC ++ NVEL ++A++++ +LDP NS YV++SN+ A AG W V++VR LMK
Sbjct: 716 IWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMK 775
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
+ + K YSW+++ N H F+ D SHP + I+ LK
Sbjct: 776 DNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLK 815
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 218/449 (48%), Gaps = 49/449 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV +A++ Y G L +++ F +P ++ V WN M+ GCI +D A F+ M
Sbjct: 175 DVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMR 234
Query: 140 ----ERNTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFMKKGEVD 191
E N AT +S L +L + V +L + K +D
Sbjct: 235 ASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLD 294
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------ 233
A L + M ++V+W MI+G V+N F EA LFY M PD
Sbjct: 295 DAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALT 354
Query: 234 -------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+ +VF+V+A++ + K + A+ L++ + D V +
Sbjct: 355 DLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGST 414
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI+GY NG++EEAL++F +++ ++P+ T+ SV C+++ L G+Q H V+RN
Sbjct: 415 MISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNA 474
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+E V +A++ MY++CG + S F ++ + V+WN++I++F+Q+G ++AL F
Sbjct: 475 YERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFR 534
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDILSR 453
QM + G + IT + LSAC + ++ + +K G I + + L+D+ ++
Sbjct: 535 QMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIK--GPIKADIFAESALIDMYAK 592
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G LE A ++ + MP + + W S+++A
Sbjct: 593 CGNLELALRVFEFMPDKNEVS-WNSIISA 620
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 42/299 (14%)
Query: 127 RIDDAFDYFQAMPERNTAT---YNAMISGFLKHGRLEEATRLFEQM--------PRRNVI 175
R DA F A+P A+ +N +I GF G+ A + +M P + +
Sbjct: 85 RFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTL 144
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
Y V K+ A MS +V T G +
Sbjct: 145 PY------------VVKSCAALGAMSLGRLVHRTARAIGLAND----------------- 175
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
V+V +A++ + G+L NAR F+ I +DCV +N M+ G + G + A+RLF M
Sbjct: 176 --VYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNM 233
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+P+ ATL + C+ L G Q H L ++ G E V+V N ++ MY++C +
Sbjct: 234 RASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCL 293
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
D+ F + +LV+WN +I+ Q+G + +A F M +G PD IT +SLL A
Sbjct: 294 DDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPA 352
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 4/228 (1%)
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM--QPDDATLVSVFTACSALQ 318
R + +N +I G+ G A+ + M PD TL V +C+AL
Sbjct: 96 LPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALG 155
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
++ GR H G +V V +A++ MY+ G + ++ AF I + V WN ++
Sbjct: 156 AMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMD 215
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+ G + A+ F M +G +P+ T LS C + L L VK G+
Sbjct: 216 GCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKC-GLE 274
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
P L+ + ++ L+ AW++ + MP + D W +++ CV N
Sbjct: 275 PEVAVANTLLAMYAKCQCLDDAWRLFELMP-QDDLVTWNGMISGCVQN 321
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 290/522 (55%), Gaps = 9/522 (1%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP---VKNIVSWNCMIAGCIDN 125
AR +FD++ + +I WN II Y +N F + LF + + + + C+I GC
Sbjct: 66 ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARL 125
Query: 126 DRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
+ + + + ++++ + K G ++ A ++F+ M ++V+ + +++
Sbjct: 126 GVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLI 185
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
DG+ + GE+D A L + M ++ SWTV++ G K + AR+LF +MP +N+
Sbjct: 186 DGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPC--RNLVSW 243
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
AMI G+ K G ++A LF ++ D V++N MIAGY NG +A+++F M+K+ +
Sbjct: 244 NAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSR 303
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P ATLVSV +A S L +L +GR H + +NGFE + + ++I MY++CG I +
Sbjct: 304 PSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTV 363
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
FR I + W II HG AL F +M G P+ I F+ +L+AC HAG V
Sbjct: 364 FRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLV 423
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
++ F++M+ Y I P+ EHY CLVDIL RAG LE+A + MP + +W SLL
Sbjct: 424 DDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLG 483
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
+ +++GE AA+++ E+ P+ Y++LSN+YAA+GMW V+ VR +M ++G K
Sbjct: 484 GSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKD 543
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
S +E +H F+ GD+SHP +I+ ++ ++K V
Sbjct: 544 PGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCV 585
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 202/630 (32%), Positives = 315/630 (50%), Gaps = 76/630 (12%)
Query: 28 DSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSR----------------AGKISAARQ 71
DS N S NCLI FS Q + + L R G +AA
Sbjct: 69 DSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAAST 128
Query: 72 LFDQMTTK-------------DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCM 118
L D + DV ++++ Y + G + E+++LF MP +N VSW M
Sbjct: 129 LSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATM 188
Query: 119 IAGCIDNDRIDDAFDYFQAMPER------------------------NT----------- 143
I+G + D+AF+ F+ M NT
Sbjct: 189 ISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKN 248
Query: 144 ------ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
+ NA+++ ++K G LE+A + FE +N I+++AM+ GF + G+ DKA L
Sbjct: 249 GLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLF 308
Query: 198 DYMSFKNVVSWTVMITGYVKNER----FCEARELF-YRMP-DYDKNVFVVTAMITGFCKV 251
M + + G + E R++ Y + Y+ ++V++A++ + K
Sbjct: 309 YDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKC 368
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G + +AR FE IQ D V + ++I GY QNG E AL L+ M + P+D T+ SV
Sbjct: 369 GSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVL 428
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
ACS L L++G+Q H +I+ F + + +A+ MY++CG + D F ++ + +++
Sbjct: 429 KACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVI 488
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SWN +I+ +Q+G + L F +M L G PD +TF++LLSAC H G V+ F++M
Sbjct: 489 SWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMM 548
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
+ I P+ EHY C+VDILSRAG+L +A + + + +W LLAA + + +L
Sbjct: 549 FDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDL 608
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
G A +K+ EL S+ YV+LS++Y A G W DV RVR +MK +GVTK+ SWIE+ +
Sbjct: 609 GAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKS 668
Query: 552 KVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
H F+ GD HP ID+I L LK + MK
Sbjct: 669 LTHVFVVGDNMHPQIDEIRLGLKLLTKLMK 698
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 29/369 (7%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY-- 199
+T N++I+ + K +A +F+ + ++V+S+ +++ F ++ +A A S +
Sbjct: 44 STQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQQ----QAHAPSLHVM 99
Query: 200 -------MSFKNVVSWTVMITGY------VKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
M+ K +V +TG + + R +VF ++++
Sbjct: 100 HLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLN 159
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+CK G++ AR LF+ + ++ VS+ MI+GYA +A+EA LF M + ++
Sbjct: 160 MYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENE 219
Query: 307 LV--SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
V SV +A + L+N GRQ H L ++NG VSV NA++TMY +CG + D+ F
Sbjct: 220 FVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFEL 279
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ N ++W+ ++ FAQ G +KAL F M +G P T + +++AC A + E
Sbjct: 280 SGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEG 339
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL---EKAWQITQGMPFEADTGVWGSLLA 481
+ +K+ G + LVD+ ++ G + K ++ Q + D +W S++
Sbjct: 340 RQMHGYSLKL-GYELQLYVLSALVDMYAKCGSIVDARKGFECIQ----QPDVVLWTSIIT 394
Query: 482 ACVINLNVE 490
V N + E
Sbjct: 395 GYVQNGDYE 403
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C+ + L +GR H ++ G ++ + N++I +Y++C + L F I++ ++VSW
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 374 NTIIAAFAQHGHYEKAL 390
N +I AF+Q + +L
Sbjct: 80 NCLINAFSQQQAHAPSL 96
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 314/581 (54%), Gaps = 52/581 (8%)
Query: 57 ISALSRAGKISAARQLFDQMT----TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+SA + G + QL + D+I +++ Y + ++ + F +NI
Sbjct: 369 LSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENI 428
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRL----EEATR 164
V WN M+ D + D+F+ F+ M N TY +++ G L + T
Sbjct: 429 VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTH 488
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+ + + NV + ++D + K G++ A + + +VVSWT MI GYV+++ F EA
Sbjct: 489 VIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEA 548
Query: 225 RELF----YRMPDYDKNVF---------------------------------VVTAMITG 247
+LF YR +D F + A+I+
Sbjct: 549 LQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISL 608
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ + G ++ A L FE+I K+ +S+N++++G AQ+G EEAL++F M++ + + + T
Sbjct: 609 YARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTY 668
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
S +A ++L + +G+Q H +V++ G+++ V N++I++Y++ G I D+ F +
Sbjct: 669 GSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSE 728
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N++SWN +I ++QHG +AL F +M + G P+ +TF+ +LSAC H G V E +D
Sbjct: 729 RNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDY 788
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
FE M K++ ++P SEHY C+VD+L RAGQL++A + + MP AD +W +LL+ACVI+
Sbjct: 789 FESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHK 848
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
N+E+GE AA + EL+P++SA YV++SN+YA + W R LMK+ GV K+ SWI
Sbjct: 849 NIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWI 908
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHL---ELKRASVQMKSVDD 585
E+ N VH F GD HP ++I+ L R + ++ V D
Sbjct: 909 EVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQD 949
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/547 (24%), Positives = 236/547 (43%), Gaps = 117/547 (21%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
V N I S+ G I +A+++F+ + KD++TW A+I+G QNG +E+ LF M
Sbjct: 196 LVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHAS 255
Query: 111 NI------------------------------VSW---------NCMIAGCIDNDRIDDA 131
I + W N ++A + ++ A
Sbjct: 256 EIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISA 315
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR-------------------- 171
F M R+ +YN++ISG ++ G + A LF +M R
Sbjct: 316 ERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASV 375
Query: 172 -------------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
++I ++LD + K +V+ A +N+V W VM+
Sbjct: 376 GALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVML 435
Query: 213 TGYVKNERFCEARELFYRM------PD-------------------------------YD 235
Y + + ++ E+F +M P+ +
Sbjct: 436 VAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQ 495
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
NV+V + +I + K G L A + R+ D VS+ AMIAGY Q+ + EAL+LF M
Sbjct: 496 LNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEM 555
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+Q D+ S +AC+ ++ L +G+Q H GF A++S+ NA+I++Y+RCG I
Sbjct: 556 EYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRI 615
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++ LAF +I N +SWN++++ AQ G++E+AL F +M + + T+ S +SA
Sbjct: 616 QEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAA 675
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ + + +++K G E L+ + +++G + AW+ M E +
Sbjct: 676 ASLANIKQGQQIHSMVLKT-GYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVIS 733
Query: 476 WGSLLAA 482
W +++
Sbjct: 734 WNAMITG 740
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 167/327 (51%), Gaps = 20/327 (6%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM------ 200
++++ + +HG A ++F++ R+V S+ M+ F+ + + L M
Sbjct: 97 DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGIT 156
Query: 201 ----SFKNVVSWTV---MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
+F V+ V + YVK +R +Y +D + V +I + K G
Sbjct: 157 PNGYTFAGVLKACVGGDIAFNYVKQ---VHSRTFYY---GFDSSPLVANLLIDLYSKNGY 210
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+E+A+ +F I KD V++ AMI+G +QNG+ EEA+ LF M ++ P L SV +A
Sbjct: 211 IESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSA 270
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
+ +QL G Q H LVI+ GF + VCN ++ +YSR ++ +E F ++S + VS+
Sbjct: 271 STKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSY 330
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N++I+ Q G ++AL F++M + PD IT SLLSAC G +++ M L +K
Sbjct: 331 NSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIK 390
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKA 460
G+ L+D+ S+ +E A
Sbjct: 391 A-GMSADIILEGSLLDLYSKCADVETA 416
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 212/446 (47%), Gaps = 33/446 (7%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN-----LFQSMPVKNIVSWN 116
R G A ++FD+ + + V +WN +I + F+ + N LF+ M + I
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMI-----HVFVAQKSNFQVFCLFRRMLAEGITPNG 159
Query: 117 CMIAG----CIDNDRIDDAFDYFQAMPER--------NTATYNAMISGFLKHGRLEEATR 164
AG C+ D AF+Y + + R + N +I + K+G +E A +
Sbjct: 160 YTFAGVLKACVGGDI---AFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKK 216
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+F + ++++++ AM+ G + G ++A L M + +++ + +
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276
Query: 225 RELFYRMP------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
EL ++ + +V ++ + + L +A +F + +D VS+N++I+G
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
Q G ++ AL LF+ M + ++PD T+ S+ +AC+++ L++G Q H I+ G A+
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+ + +++ +YS+C + + F + N+V WN ++ A+ Q + + F QM +
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
G P+ T+ S+L C G + + ++K G + + L+D+ ++ GQL
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLA 515
Query: 459 KAWQITQGMPFEADTGVWGSLLAACV 484
A +I + +P E D W +++A V
Sbjct: 516 LALRILRRLP-EDDVVSWTAMIAGYV 540
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 62/154 (40%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ C L E + H + ++GF+ + ++++ Y R G + F + + +
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ SWN +I F + F +M G P+G TF +L AC +
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
YG S L+D+ S+ G +E A ++
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKV 217
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 287/535 (53%), Gaps = 56/535 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV+NA I L G + AR++FD+ +D+++WN++I GY + G+ E+ N ++ M V
Sbjct: 142 IFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKV 201
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ I + G + + A + G H +EE L +
Sbjct: 202 EGIKPDEVTMIGVVSS-----------------CAQLEDLDLGRESHCYIEE-NGLKLTV 243
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P N A++D +MK G ++ AR L D M+ K +VSWT
Sbjct: 244 PLAN-----ALMDMYMKCGNLESARKLFDSMTNKTMVSWTT------------------- 279
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
M+ G+ + G+L+ A LF+ + KD V +NAMI GY +EAL
Sbjct: 280 --------------MVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEAL 325
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF+ M M++ PD+ T+VS +ACS L L+ G H + ++ NV++ A+I MY
Sbjct: 326 ALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMY 385
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++CG I + F+++ N ++W II+ A HG+ A+ +FS+M N PD +TFL
Sbjct: 386 AKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFL 445
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
LLSAC H G V E F M + + P +HY+C+VD+L RAG LE+A ++ + MP
Sbjct: 446 GLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPI 505
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
EAD VWG+L AC I+ NV +GE AA K+ ++DP +S +YV+L+N+Y A MW++ +
Sbjct: 506 EADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKA 565
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVD 584
R LM+++GV K S IE+ V+ F+ D SHP ++I+ L + + Q++ V+
Sbjct: 566 RKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELVE 620
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 164/354 (46%), Gaps = 71/354 (20%)
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRM-------PD----------------------- 233
N SW V I G++ +E EA L+ R+ PD
Sbjct: 70 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 129
Query: 234 --------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+D ++FV A+I G L+ AR +F++ +D VS+N+MI GY + G A
Sbjct: 130 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWA 189
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EAL + M ++PD+ T++ V ++C+ L+ L+ GR+SH + NG + V + NA+
Sbjct: 190 YEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANAL 249
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG--------------------- 384
+ MY +CG + + F + + +VSW T++ +AQ G
Sbjct: 250 MDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWN 309
Query: 385 ----------HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
++AL F++M +PD +T +S LSAC G ++ + + + K
Sbjct: 310 AMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK- 368
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
+ + + T L+D+ ++ G++ KA Q+ Q +P ++ W ++++ ++ N
Sbjct: 369 HELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGN 421
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 258/445 (57%), Gaps = 6/445 (1%)
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR--RN 173
NC+I + + A F MP+R++ ++N+MI G++K G +E A LF+ MPR +N
Sbjct: 164 NCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMPREVKN 223
Query: 174 VISYTAMLDGFMKKGE-VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+IS+ +++ G+ + + VD A L M K+++SW MI GYVK+ R +A++LF MP
Sbjct: 224 LISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMP 283
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
D V MI G+ K+G + A+ LF+++ +D VS+N+M+AGY QN EAL +F
Sbjct: 284 RRD--VVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIF 341
Query: 293 SGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
S M K + PD+ TLV V +A + L L++ H+ ++ F + A+I MYS+
Sbjct: 342 SDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSK 401
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG I + L F I + ++ WN +I A HG E A Q+ PD ITF+ +
Sbjct: 402 CGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGV 461
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L+AC H+G V E + FELM + + I P +HY C+VDILSR+G +E A + Q MP E
Sbjct: 462 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIQEMPIEP 521
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
+ +W + L AC + E GEL K + N + YV+LSN+YA+ G W+DV R+R
Sbjct: 522 NDVIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYVLLSNMYASFGKWKDVRRIRT 581
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYF 556
+MKE+ + K SWIE+ +VH F
Sbjct: 582 MMKERKIEKIPGCSWIELDGRVHEF 606
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 215/408 (52%), Gaps = 50/408 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + ARQ+FD+M +D +++N++I GY + G ++ ++ LF MP
Sbjct: 160 LFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMPR 219
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
VKN++SWN +I+G +D +D A + F MPE++ ++N+MI G++KHGR+E+A LF
Sbjct: 220 EVKNLISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLF 279
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ MPRR+V+++ M+DG+ K G V +A+ L D M ++VVS+ M+ GYV+N+ EA E
Sbjct: 280 DAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALE 339
Query: 227 LFYRM-------PD--------------------YDKNVFVV-----------TAMITGF 248
+F M PD D ++++V A+I +
Sbjct: 340 IFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMY 399
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G +++A L+FE I+ K +NAMI G A +G+ E A + + + ++PDD T V
Sbjct: 400 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFV 459
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SR G I ELA I
Sbjct: 460 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSI---ELAKNLIQE 516
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLS 410
PN V W T + A H +E + + L G++P LS
Sbjct: 517 MPIEPNDVIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYVLLS 564
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 173/407 (42%), Gaps = 88/407 (21%)
Query: 236 KNVFVVTAMITGFC---KVGMLENARLLFERI---------QPKDCVSFNAMIAGYAQNG 283
KN + T ++ F + + E ARL+F + +D +NA+I ++
Sbjct: 45 KNSNLSTRIVLAFAASPRPYLAEFARLVFREYHVCSSSPGGEVEDPFLWNAVIKSHSHGK 104
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
++AL LF M++ + D ++ V ACS L + G Q H ++ + G +++ + N
Sbjct: 105 DPKQALLLFCLMLENGVSVDKFSMSLVLKACSRLGFVKGGLQIHGILRKTGLCSDLFLQN 164
Query: 344 AVITMYSRCG------------------------------GILDS-----ELAFRQIHSP 368
+I +Y +CG G+++S +L R++
Sbjct: 165 CLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMPREV--K 222
Query: 369 NLVSWNTIIAAFAQHGH-YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
NL+SWN+II+ +AQ + A F++M + D I++ S++ G++ ++ DL
Sbjct: 223 NLISWNSIISGYAQTSDGVDIASNLFAEMP----EKDLISWNSMIDGYVKHGRIEDAKDL 278
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN- 486
F+ M + + + ++D ++ G + +A + MP D + S++A V N
Sbjct: 279 FDAMPRRDVVT-----WATMIDGYAKLGFVHQAKTLFDQMPHR-DVVSYNSMMAGYVQNK 332
Query: 487 LNVELGELAAKKMRE--LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAY 544
++E E+ + +E L P + + ++LS + A G + L + E+
Sbjct: 333 YHMEALEIFSDMEKESHLSPDETTLVIVLSAI-AQLGRLSKAMDMHLYIVEK-------- 383
Query: 545 SWIEIGNKVHYFLGG-------DMSHPCIDKIHLELKRASVQMKSVD 584
+FLGG DM C H L ++ KS+D
Sbjct: 384 ---------QFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID 421
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 270/477 (56%), Gaps = 23/477 (4%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA 148
TG W + FLQ NC+I + + A F M +R++ +YN+
Sbjct: 152 TGIWSDLFLQ-----------------NCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNS 194
Query: 149 MISGFLKHGRLEEATRLFEQMP--RRNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNV 205
MI G++K G +E A LF+ MP ++N+IS+ +M++G+ ++ + VD A L D M K++
Sbjct: 195 MIDGYVKCGLIESARELFDLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDEMPEKDL 254
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+SW +I GYVK+ R +A++LF +MP D V M+ G+ K+G + A+ LF+++
Sbjct: 255 ISWNSLIDGYVKHGRIEDAKDLFDKMPRRD--VVTWATMVDGYAKLGFVHQAKSLFDQMP 312
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGR 324
+D V++N+M+AGY QN EA+ +F+ M K + PD+ TLV V +A + L L++
Sbjct: 313 QRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAM 372
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H+ + F + A+I MYS+CG I + F +I + ++ WN +I A HG
Sbjct: 373 DMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHG 432
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P +HY
Sbjct: 433 LGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMKRKHKIEPRLQHY 492
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+VDILSR+G++E A + + MP E + +W + L AC + E GEL AK +
Sbjct: 493 GCMVDILSRSGRIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAG 552
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
N + YV+LSN+YA+ GMW++V RVR +MKE+ + K SWIE+ VH F M
Sbjct: 553 YNPSSYVLLSNMYASLGMWKEVRRVRTMMKERKIQKIPGCSWIELDGSVHEFFVDSM 609
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 214/412 (51%), Gaps = 50/412 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N I + G + ARQ+FD+M+ +D +++N++I GY + G ++ ++ LF MP
Sbjct: 158 LFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMPS 217
Query: 110 --KNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
KN++SWN MI G D +D A + F MPE++ ++N++I G++KHGR+E+A LF
Sbjct: 218 EKKNLISWNSMINGYAQRADGVDIASNLFDEMPEKDLISWNSLIDGYVKHGRIEDAKDLF 277
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
++MPRR+V+++ M+DG+ K G V +A++L D M ++VV++ M+ GYV+N EA +
Sbjct: 278 DKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNSMMAGYVQNRYHMEAID 337
Query: 227 LFYRM-------PDYDKNVFVVT-------------------------------AMITGF 248
+F M PD V V++ A+I +
Sbjct: 338 IFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYTVEKKFLLGGKLGVALIDMY 397
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G ++ A +FERI+ K +NAMI G A +G+ E A + + + ++PDD T V
Sbjct: 398 SKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFV 457
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SR G I ELA I
Sbjct: 458 GVLNACSHSGLVKEGLLCFELMKRKHKIEPRLQHYGCMVDILSRSGRI---ELAKNLIEE 514
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSA 414
PN V W T + A + H +E + + L G++P LS + A
Sbjct: 515 MPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 566
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 149/320 (46%), Gaps = 28/320 (8%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N+ I + G+I A+ LFD+M +DV+TW ++ GY + GF+ ++K+LF MP +++V
Sbjct: 258 NSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVV 317
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQ 168
++N M+AG + N +A D F M + + T ++S + GRL +A +
Sbjct: 318 AYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLY 377
Query: 169 MPRRNVI----SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY----VKNER 220
+ + A++D + K G + +A + + + K++ W MI G +
Sbjct: 378 TVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHGLGESA 437
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE------RIQPKDCVSFNA 274
F ++ R D FV ++ G+++ L FE +I+P+ +
Sbjct: 438 FDMLLQIERRSIKPDDITFV--GVLNACSHSGLVKEGLLCFELMKRKHKIEPR-LQHYGC 494
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVLVIRN 333
M+ +++G E A L +M ++P+D + TACS + G + L+++
Sbjct: 495 MVDILSRSGRIELAKNLIE---EMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQA 551
Query: 334 GFEANVSVCNAVITMYSRCG 353
G+ N S + MY+ G
Sbjct: 552 GY--NPSSYVLLSNMYASLG 569
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 141/323 (43%), Gaps = 50/323 (15%)
Query: 236 KNVFVVTAMITGFC---KVGMLENARLLFERIQP--------KDCVSFNAMIAGYAQNGV 284
KN + T ++ F + + E AR +F +D +NA+I ++
Sbjct: 44 KNTNLTTRIVLAFAASRRSYLAEFARCVFHEYHVSSXXSGNVEDPFLWNAVIKSHSHGVE 103
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
+AL LF M+K + D +L V ACS L + EG Q H + + G +++ + N
Sbjct: 104 PRKALLLFFLMLKNGVSVDKFSLSLVLKACSRLGFVKEGMQXHGFLRKTGIWSDLFLQNC 163
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG------- 397
+I +Y +CG + + F ++ + VS+N++I + + G E A F M
Sbjct: 164 LIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMPSEKKNLI 223
Query: 398 -----LNGF------------------DPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+NG+ + D I++ SL+ G++ ++ DLF+ M +
Sbjct: 224 SWNSMINGYAQRADGVDIASNLFDEMPEKDLISWNSLIDGYVKHGRIEDAKDLFDKMPRR 283
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGE 493
+ + +VD ++ G + +A + MP + D + S++A V N ++E +
Sbjct: 284 DVVT-----WATMVDGYAKLGFVHQAKSLFDQMP-QRDVVAYNSMMAGYVQNRYHMEAID 337
Query: 494 L--AAKKMRELDPQNSAVYVMLS 514
+ +K L P + + ++LS
Sbjct: 338 IFNDMEKESHLSPDETTLVIVLS 360
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 189/563 (33%), Positives = 305/563 (54%), Gaps = 37/563 (6%)
Query: 57 ISALSRAGKISAARQL----FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+ A + G ++AA+Q+ F DV N +I+ Y +NG L+ ++ +F SM +N
Sbjct: 782 LQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNT 841
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
SWN MI+ ++DA+ F + + + T+N ++SG HG EE + ++
Sbjct: 842 SSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQR 901
Query: 169 MP----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN-----VVSWTVMITGYVKNE 219
M + N S T++L + G ++ + Y+ +N V T +I YVKN
Sbjct: 902 MQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYV-LRNGFDCDVYVGTSLIDMYVKNH 960
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENA-RLL----FERIQPKDCVSFNA 274
A+ +F M + +N+F ++++G+ GM E+A RLL E I+P D V++N
Sbjct: 961 SLXSAQAVFDNMKN--RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKP-DLVTWNG 1017
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI+GYA G A +A P+ A++ + AC++L LL +G++ H L IRNG
Sbjct: 1018 MISGYAMWGCARKAF-----------MPNSASITCLLRACASLSLLQKGKEIHCLSIRNG 1066
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F +V V A+I MYS+ + ++ FR+I + L SWN +I FA G ++A+ F+
Sbjct: 1067 FIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFN 1126
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M G PD ITF +LLSAC ++G + E F+ M+ Y I+P EHY C+VD+L RA
Sbjct: 1127 EMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRA 1186
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G L++AW + MP + D +WG+LL +C I+ N+ E AAK + +L+P NSA Y+++
Sbjct: 1187 GYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMM 1246
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
NLY+ W D+ +R LM GV + +SWI+I +VH F + HP KI+ EL
Sbjct: 1247 NLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELY 1306
Query: 575 RASVQMKSVDDFVEIATSWSSFD 597
+ +MK + ++ + + D
Sbjct: 1307 QLVSEMKKLGYVPDVNCVYQNMD 1329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 163/343 (47%), Gaps = 73/343 (21%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF---QSMPVK 110
N IS S+ GK+ AR++FD M ++ +WN++I+ Y GFL ++ +LF +S +K
Sbjct: 814 NPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMK 873
Query: 111 -NIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMIS-----GFLKHGR-- 158
+IV+WNC+++G + ++ + Q M + N+++ +++ GFL G+
Sbjct: 874 PDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKET 933
Query: 159 ----------------------------LEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
L A +F+ M RN+ ++ +++ G+ KG
Sbjct: 934 HGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMF 993
Query: 191 DKARALSDYMSFKNV----VSWTVMITGY----------VKNE-------RFCEARELFY 229
+ A L + M + + V+W MI+GY + N R C + L
Sbjct: 994 EDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQ 1053
Query: 230 RMPD---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
+ + + ++VFV TA+I + K L+NA +F RIQ K S+N MI G+A
Sbjct: 1054 KGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFA 1113
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
G+ +EA+ +F+ M K+ + PD T ++ +AC L+ EG
Sbjct: 1114 IFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG 1156
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 150/309 (48%), Gaps = 9/309 (2%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+D +V++ A++ + + LE A +F + + + +N I Q+ ++ + LF
Sbjct: 705 FDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFR 764
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M ++ + AT+V V AC + LN +Q H V R G +++VS+CN +I+MYS+ G
Sbjct: 765 KMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNG 824
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ + F + + N SWN++I+++A G A F ++ + PD +T+ LLS
Sbjct: 825 KLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLS 884
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM----PF 469
G E +++ + M + G P+S T ++ +S G L + T G F
Sbjct: 885 GHFLHGYKEEVLNILQRM-QGEGFKPNSSSMTSVLQAISELGFLNMGKE-THGYVLRNGF 942
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ D V SL+ V N ++ + M+ +N + L + Y+ GM+ D R+
Sbjct: 943 DCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKN---RNIFAWNSLVSGYSFKGMFEDALRL 999
Query: 530 RLLMKEQGV 538
M+++G+
Sbjct: 1000 LNQMEKEGI 1008
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 108/240 (45%), Gaps = 3/240 (1%)
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN-GVAEEALRLFSGMIKMDMQP 302
+I+ + G +A ++F P++ + +N+ + + + G L +F + +
Sbjct: 613 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 672
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D C+ + + G + H +I+ GF+ +V + A++ Y RC G+ + F
Sbjct: 673 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 732
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
++ +P + WN I Q +K + F +M + + T + +L ACG G +N
Sbjct: 733 HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALN 792
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + + + +G+ L+ + S+ G+LE A ++ M +T W S++++
Sbjct: 793 AAKQIHGYVFR-FGLDSDVSLCNPLISMYSKNGKLELARRVFDSME-NRNTSSWNSMISS 850
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 107/255 (41%), Gaps = 44/255 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V + I + + +A+ +FD M +++ WN++++GY G +++ L M
Sbjct: 946 VYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEK 1005
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
+ I V+WN MI+G AF MP N+A+ ++ L++
Sbjct: 1006 EGIKPDLVTWNGMISGYAMWGCARKAF-----MP--NSASITCLLRACASLSLLQKGKE- 1057
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
I ++ +GF+ ++V T +I Y K+ A
Sbjct: 1058 ---------IHCLSIRNGFI-----------------EDVFVATALIDMYSKSSSLKNAH 1091
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP----KDCVSFNAMIAGYAQ 281
++F R+ +K + MI GF G+ + A +F +Q D ++F A+++
Sbjct: 1092 KVFRRI--QNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 1149
Query: 282 NGVAEEALRLFSGMI 296
+G+ E + F MI
Sbjct: 1150 SGLIGEGWKYFDSMI 1164
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 190/583 (32%), Positives = 314/583 (53%), Gaps = 39/583 (6%)
Query: 27 PDSCGNFTPHSSNCLIRLFS-TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWN 85
P + H+ C + S + VFV+ A ++ + G IS AR++FDQM ++ ++W
Sbjct: 134 PSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWA 193
Query: 86 AIITGYWQNGFLQESKNLF----QSMPVKN------------IVSWNCMIAGCIDNDRID 129
A+++GY +E+ LF Q P++ V +I + +
Sbjct: 194 AMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLK 253
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
D F + N++++ + K ++ A +F RN I+++AM+ G+ + GE
Sbjct: 254 DGLVGF-------VSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGE 306
Query: 190 VDKARALSDYM----------SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
D A + M +F +++ + + V + +A L ++ +++ V+
Sbjct: 307 ADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGK---QAHGLMVKL-GFERQVY 362
Query: 240 VVTAMITGFCKVGMLENARLLFERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
V +A++ + K G +A+ F ++ D V + AMI G+ QNG EEAL L+S M K
Sbjct: 363 VKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKE 422
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ P T+ SV AC+ L L G+Q H +++ GF SV A+ TMYS+CG + DS
Sbjct: 423 GVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDS 482
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+ FR++ +++SWN+II+ F+QHG AL F +M L G PD ITF+++L AC H
Sbjct: 483 MVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHM 542
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V+ F M K YG+IP +HY C+VDILSRAGQL++A + + + T +W
Sbjct: 543 GLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRI 602
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
+L AC + ++G A +++ EL ++S+ Y++LSN+YAA W DV RVR LM+ +GV
Sbjct: 603 VLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGV 662
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+K SW+E+ N+V+ F+ G+ HP +KI++EL R + MK
Sbjct: 663 SKDPGCSWVELNNQVNVFVVGEQQHPEAEKINVELIRLAKHMK 705
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/473 (36%), Positives = 266/473 (56%), Gaps = 23/473 (4%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA 148
TG W + +LQ NC+I I + A F MP R++ +YN+
Sbjct: 150 TGIWSDLYLQ-----------------NCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNS 192
Query: 149 MISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNV 205
MI G++K G +E A LF+ MP+ +N+IS+ M+ G+ ++ + V+ A+ L D M K++
Sbjct: 193 MIDGYVKCGMIESARGLFDLMPKEKKNLISWNFMISGYAQRADGVNVAKKLFDEMPEKDL 252
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+SW +I GYVK+ R +A+ LF +MP D V M+ G+ K+G + A+ LF+R+
Sbjct: 253 ISWNSLIDGYVKHGRMEDAKSLFNKMPKRD--VVTWATMVDGYAKLGFVHQAKSLFDRMP 310
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGR 324
+D V++N+MI GY QN +EA+ +F+ M K + PD+ TLV V +A + L L++
Sbjct: 311 LRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAV 370
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H+ ++ N F + A+I YS+CG I S F +I + ++ WN +I A HG
Sbjct: 371 DIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHG 430
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P +HY
Sbjct: 431 LGESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHY 490
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+VDILSR+G +E A + + MP E + +W + L AC + E GEL AK +
Sbjct: 491 GCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGG 550
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + +V+LSN+YA+ GMW++V RVR MKE+ + K SWIE+ VH F
Sbjct: 551 YNPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWIELDGNVHEFF 603
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 211/412 (51%), Gaps = 50/412 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+++ N I + G + ARQ+FD+M +D +++N++I GY + G ++ ++ LF MP
Sbjct: 156 LYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPK 215
Query: 109 -VKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
KN++SWN MI+G D ++ A F MPE++ ++N++I G++KHGR+E+A LF
Sbjct: 216 EKKNLISWNFMISGYAQRADGVNVAKKLFDEMPEKDLISWNSLIDGYVKHGRMEDAKSLF 275
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+MP+R+V+++ M+DG+ K G V +A++L D M ++VV++ MITGYV+N EA
Sbjct: 276 NKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMPLRDVVAYNSMITGYVQNRYHKEAIG 335
Query: 227 LFYRM-------PDYDKNVFVVT-------------------------------AMITGF 248
+F M PD V V++ A+I +
Sbjct: 336 IFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTY 395
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G ++ + +FE I+ K +NAMI G A +G+ E A + + K ++PDD T +
Sbjct: 396 SKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFI 455
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SR G I ELA I
Sbjct: 456 GVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSI---ELAKNLIEE 512
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSA 414
PN V W T + A + H +E + + L G++P LS + A
Sbjct: 513 MPIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYA 564
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 150/345 (43%), Gaps = 38/345 (11%)
Query: 206 VSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFC---KVGMLENARLL 260
+S T+ + G KN + ++ R+ + KN + T ++ F + + E AR +
Sbjct: 14 ISPTIKLLGSCKNSE--DVNKIHARLITNGFIKNPNLTTRIVLDFADSRRSYLAEFARFV 71
Query: 261 FERIQP------KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
F +D +NA+I ++ +AL LF M++ + D +L V AC
Sbjct: 72 FHEYHVCSNGDFEDPFLWNAVIKSHSHGLDPRKALLLFCLMLETGVSVDKFSLSLVLKAC 131
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
S L + EG Q H + + G +++ + N +I +Y +CG + + F ++ + VS+N
Sbjct: 132 SRLGFVKEGMQIHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYN 191
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
++I + + G E A F M + F+ + A VN + LF+ M
Sbjct: 192 SMIDGYVKCGMIESARGLFDLMPKEKKNLISWNFM-ISGYAQRADGVNVAKKLFDEM--- 247
Query: 435 YGIIPSSE--HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
P + + L+D + G++E A + MP + D W A +++ +LG
Sbjct: 248 ----PEKDLISWNSLIDGYVKHGRMEDAKSLFNKMP-KRDVVTW-----ATMVDGYAKLG 297
Query: 493 ELAAKK-------MRELDPQNSAVYVMLSNLY--AAAGMWRDVTR 528
+ K +R++ NS + + N Y A G++ D+ +
Sbjct: 298 FVHQAKSLFDRMPLRDVVAYNSMITGYVQNRYHKEAIGIFNDMEK 342
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 300/550 (54%), Gaps = 17/550 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+FV ISA S ++ A F+Q+ +V +N +I + N ++ F +M
Sbjct: 52 LFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQR 111
Query: 109 ---VKNIVSWNCMIAGCIDN------DRIDDAFDYFQAMPERNTATYNAMISGFLKHGR- 158
+ ++ ++ C N + + + F M + N++I + K G
Sbjct: 112 DGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSD--VFVPNSLIDSYSKCGSC 169
Query: 159 -LEEATRLFEQM-PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
+ A +LF M RR+V+S+ +M+ G K G ++AR + D M K+ +SW M+ GYV
Sbjct: 170 GISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYV 229
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
K + +A +LF MP+ +NV + M+ G+CK G +E AR+LF+++ K+ VS+ ++
Sbjct: 230 KVGKMDDAFKLFDEMPE--RNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIV 287
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+G+A+ G+A EA+ LF M K ++ D+ T++S+ AC+ LL G + H + N F+
Sbjct: 288 SGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFK 347
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ NA++ MY++CG + + F I + ++VSWN ++ A HGH KAL F +M
Sbjct: 348 CTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRM 407
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
GF P+ +T + +L AC HAG +++ + F M + Y ++P EHY C+VD+L R G+
Sbjct: 408 KEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGR 467
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
LE+A ++ + MP + +WG+LL AC ++ VEL + EL+P +S + MLSN+
Sbjct: 468 LEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTDSGNFSMLSNI 527
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
YAAAG W V RL M+ G K S IE+ N+VH F D SHP D I+ +
Sbjct: 528 YAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGL 587
Query: 577 SVQMKSVDDF 586
++K V+ F
Sbjct: 588 RHELKQVECF 597
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 115/237 (48%), Gaps = 12/237 (5%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
++FVV +I+ F + A F ++Q + +N MI ++ N +A F M
Sbjct: 51 DLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQ 110
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG--G 354
+ D+ T + C+ L H + + GF ++V V N++I YS+CG G
Sbjct: 111 RDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCG 170
Query: 355 ILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ F + + ++VSWN++I+ A+ G YE+A F +M + DGI++ ++L
Sbjct: 171 ISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMP----EKDGISWNTMLD 226
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
GK++++ LF+ M + + ++ +V +AG +E A + MP +
Sbjct: 227 GYVKVGKMDDAFKLFDEMPERNVV-----SWSTMVLGYCKAGDMEMARMLFDKMPVK 278
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 110/250 (44%), Gaps = 25/250 (10%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
LN+ +Q H ++++ ++ V +I+ +S C +L + AF Q+ PN+ +NT+I A
Sbjct: 33 LNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIRA 92
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC-GHA-----GKVNESMDLFELMVK 433
+ + +A F M +G D TF LL C G+ V+ ++ F M
Sbjct: 93 HSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSD 152
Query: 434 VYGIIPSSEHYTCLVDILSRAGQ--LEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
V+ +P+S L+D S+ G + A ++ M D W S+++ L
Sbjct: 153 VF--VPNS-----LIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKG---GL 202
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
E A K E+ ++ + + + Y G D ++ M E+ V ++S + +G
Sbjct: 203 YEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVV---SWSTMVLG- 258
Query: 552 KVHYFLGGDM 561
Y GDM
Sbjct: 259 ---YCKAGDM 265
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 308/584 (52%), Gaps = 18/584 (3%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCL-IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FP + + C NF + L I+ S VFV ++ ++ + G + AR+LFD+
Sbjct: 114 FPGVFTAAALNLGC-NFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDR 172
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDA 131
M +++++W +I+GY +E+ +F M + N + +++ + + +D
Sbjct: 173 MPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSG 232
Query: 132 FDYFQAMPERNTATY----NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ + + NA+++ + K G L + LFE +N I+++A++ G+ +
Sbjct: 233 KQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQA 292
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL------FYRMPDYDKNVFVV 241
G+ KA L M + V + G +K A E + Y+ ++
Sbjct: 293 GDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTA 352
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
TA++ + K G +AR F+ + D V + ++IAGY QNG EEAL ++ M +
Sbjct: 353 TALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKIL 412
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P++ T+ SV ACS L L +G+Q H I+ G +S+ +A+ TMY++CG + + L
Sbjct: 413 PNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLI 472
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
FR++ ++VSWN +I+ +Q+GH +AL F +M L G PD ITF+++LSAC H G V
Sbjct: 473 FRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIV 532
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
F +M + ++P EHY C+VD+LSRAG+L +A + + + +W LL
Sbjct: 533 KRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLP 592
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC + N ELG A +K+ EL + S+ YV+LS++Y A G DV RVR +MK +GV K+
Sbjct: 593 ACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKE 652
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDD 585
SWIE+ + VH F+ GD HP I++I + R MK DD
Sbjct: 653 TGCSWIELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMK--DD 694
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 218/446 (48%), Gaps = 50/446 (11%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF--DYFQAM---- 138
N +I Y + G L +K +F+++ KN+VS+NC+I G N F + F+ M
Sbjct: 47 NNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANN 106
Query: 139 --PERNT-------ATYN---------------------------AMISGFLKHGRLEEA 162
P+ +T A N ++++ + K G + EA
Sbjct: 107 ILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEA 166
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKN 218
+LF++MP RN++S+T M+ G+ K +A + M N +T +++ V
Sbjct: 167 RKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCP 226
Query: 219 ERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
E +++ + + V V+ A++T + K G L + +LFE K+ ++++A+I
Sbjct: 227 EFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALI 286
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
GY+Q G + +AL+LFS M P + TLV V ACS + + EG+Q+H ++++G+E
Sbjct: 287 TGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYE 346
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ A++ MY++ G D+ F + P+LV W +IIA + Q+G E+AL + +M
Sbjct: 347 TQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRM 406
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
+ P+ +T S+L AC + + + + +K YG+ P + L + ++ G
Sbjct: 407 QMRKILPNELTMASVLKACSNLAALEQGKQIHARTIK-YGLGPELSIRSALSTMYAKCGS 465
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAA 482
LE+ I + M + D W ++++
Sbjct: 466 LEEGVLIFRRM-LQRDIVSWNAMISG 490
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 7/257 (2%)
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE-- 287
++P ++ +I + K G L A+L+FE ++ K+ VS+N +I G + NG
Sbjct: 35 KIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNF 94
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN--EGRQSHVLVIRNGFEANVSVCNAV 345
L LF MI ++ PD T VFTA +AL L + RQ HVL I+ +V V +++
Sbjct: 95 VLELFRRMIANNILPDAHTFPGVFTA-AALNLGCNFDARQVHVLGIKTASIDDVFVGSSL 153
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ Y + G + ++ F ++ NLVSW T+I+ +A ++AL F M L + +
Sbjct: 154 VNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNE 213
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
F S+LSA V+ + ++VK G++ LV + ++ G L + + +
Sbjct: 214 FVFTSVLSALVCPEFVDSGKQVHCVVVK-NGVLEFVSVLNALVTMYAKCGNLNYSLMLFE 272
Query: 466 GMPFEADTGVWGSLLAA 482
M + + W +L+
Sbjct: 273 -MCSDKNAITWSALITG 288
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/473 (36%), Positives = 267/473 (56%), Gaps = 23/473 (4%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA 148
TG W + FLQ NC+I + + A F MP+R++ +YN+
Sbjct: 125 TGIWSDLFLQ-----------------NCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNS 167
Query: 149 MISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNV 205
MI G++K G + A LF+ MP+ +N+IS+ +M+ G+ + + V+ A L M K++
Sbjct: 168 MIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDL 227
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+SW +I GYVK+ R +A++LFY MP D V MI G+ K+G + A+ LF+++
Sbjct: 228 ISWNSLIDGYVKHGRMEDAKDLFYVMPRRD--VVTWATMIDGYAKLGFVHKAKTLFDQMP 285
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGR 324
+D V++N+M+AGY QN EAL +FS M K + PD+ TLV V +A + L L++
Sbjct: 286 HRDVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAM 345
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H+ ++ F + A+I MYS+CG I + L F +I + ++ WN +I A HG
Sbjct: 346 DMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWNAMIGGLAIHG 405
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
E A ++ PD ITF+ +L+AC H+G V E + FELM + + I P +HY
Sbjct: 406 LGESAFDMLLEIERRSIKPDDITFVGILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 465
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+VDILSR+G +E A + + MP E + +W + L AC + E GE+ AK +
Sbjct: 466 GCMVDILSRSGSIELAKNLIEEMPMEPNDVIWRTFLTACSHHKEFETGEVVAKHLILQAG 525
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ GMW+D RVR +MKE+ + K SWIE+ +VH F
Sbjct: 526 YNPSSYVLLSNMYASFGMWKDARRVRTMMKERELQKVPGCSWIELDGRVHEFF 578
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 213/409 (52%), Gaps = 44/409 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + ARQ+FD+M +D +++N++I GY + G + ++ LF MP
Sbjct: 131 LFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPK 190
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+KN++SWN MI+G +D ++ A F MPE++ ++N++I G++KHGR+E+A LF
Sbjct: 191 EMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLF 250
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
MPRR+V+++ M+DG+ K G V KA+ L D M ++VV++ M+ GYV+N+ EA E
Sbjct: 251 YVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYNMEALE 310
Query: 227 LFYRM-------PD--------------------YDKNVFVV-----------TAMITGF 248
+F M PD D ++++V A+I +
Sbjct: 311 IFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMY 370
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G ++ A L+FERI+ K +NAMI G A +G+ E A + + + ++PDD T V
Sbjct: 371 SKCGSIQQAMLVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLEIERRSIKPDDITFV 430
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGI-LDSELAFRQIH 366
+ ACS L+ EG L+ R + E + ++ + SR G I L L
Sbjct: 431 GILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPM 490
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSA 414
PN V W T + A + H +E + + L G++P LS + A
Sbjct: 491 EPNDVIWRTFLTACSHHKEFETGEVVAKHLILQAGYNPSSYVLLSNMYA 539
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 139/312 (44%), Gaps = 44/312 (14%)
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F R ++F+ +I + K G L AR +F+R+ +D VS+N+MI GY + G+
Sbjct: 121 FLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGS 180
Query: 288 ALRLFSGMIKMDMQPDD-ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
A LF D+ P + L+S + S ++G + E ++ N++I
Sbjct: 181 ARELF------DLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLI 234
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG--------- 397
Y + G + D++ F + ++V+W T+I +A+ G KA F QM
Sbjct: 235 DGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNS 294
Query: 398 -LNGF----------------------DPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+ G+ PD T + +LSA G+++++MD+ +V+
Sbjct: 295 MMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEK 354
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
+ + L+D+ S+ G +++A + + + ++ W +++ I+ LGE
Sbjct: 355 QFFL-GGKLGVALIDMYSKCGSIQQAMLVFERIENKS-IDHWNAMIGGLAIH---GLGES 409
Query: 495 AAKKMRELDPQN 506
A + E++ ++
Sbjct: 410 AFDMLLEIERRS 421
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 144/344 (41%), Gaps = 65/344 (18%)
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F + +D +NA+I ++ + AL F M++ + D +L V ACS L +
Sbjct: 53 FAHGEVEDPFLWNAVIKSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFV 112
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG---------------------GILDSE 359
EG Q H + + G +++ + N +I +Y +CG ++D
Sbjct: 113 QEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGY 172
Query: 360 LAFRQIHS------------PNLVSWNTIIAAFAQHGH-YEKALIFFSQMGLNGFDPDGI 406
+ I S NL+SWN++I+ +AQ A F++M + D I
Sbjct: 173 VKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMP----EKDLI 228
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
++ SL+ G++ ++ DLF +M + + + ++D ++ G + KA +
Sbjct: 229 SWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVT-----WATMIDGYAKLGFVHKAKTLFDQ 283
Query: 467 MPFEADTGVWGSLLAACVIN-LNVELGELAAKKMRE--LDPQNSAVYVMLSNLYAAAGMW 523
MP D + S++A V N N+E E+ + +E L P + + ++LS + A G
Sbjct: 284 MPHR-DVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAI-AQLGRL 341
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
+ L + E+ +FLGG + ID
Sbjct: 342 SKAMDMHLYIVEK-----------------QFFLGGKLGVALID 368
>gi|356576967|ref|XP_003556601.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Glycine max]
Length = 453
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 249/393 (63%), Gaps = 6/393 (1%)
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+V+S+T M+ G +K G V+ ARAL D M +NVVSW MI G+ +N R EA ELF MP
Sbjct: 45 DVVSWTTMVAGLLKNGRVEDARALFDRMPVRNVVSWNAMIMGHAQNRRLHEALELFQGMP 104
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+ D + + MITGF + G L A LF ++ K+ +++ AM+ GY Q+G++EEAL++F
Sbjct: 105 ERDMHSW--NTMITGFIQNGKLNYAEKLFGEMREKNAITWTAMMMGYVQHGLSEEALKVF 162
Query: 293 SGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+ M+ D ++P+ T V+V ACS L L EG+Q H ++ + F+ + +C +I MY +
Sbjct: 163 NKMLANDGLKPNTGTFVTVLRACSDLAGLTEGQQIHQMISKTVFQ-DSXICGTLINMYPK 221
Query: 352 CGGILDSELAFRQ--IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
CG + ++ F + +L+SWN +IA +A HG+ ++A+ F++M G + +TF+
Sbjct: 222 CGELHTAKXMFDDGLLSQRDLISWNGMIAGYAHHGYGKEAINLFNEMQELGVCANDVTFV 281
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
LL AC H G V E + F+ ++K I +HY CLVD+ R G+L++A+ I +G+
Sbjct: 282 GLLRACSHTGVVEEGLKYFDEILKNRSIXLREDHYACLVDLCDRTGRLKEAFNIIEGLGK 341
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
E+ VWG LLA C ++ NV++G+L AKK+ +++PQN+ + +LSN+YA+ G W++ +
Sbjct: 342 ESPLTVWGVLLARCNVHGNVDIGKLVAKKILKIEPQNAGTHSLLSNMYASVGKWKEAANI 401
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
R+ M ++G+ KQ YSWIE+GN V F+ D S
Sbjct: 402 RMKMNDKGLKKQPGYSWIEVGNTVQVFVVDDKS 434
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 158/273 (57%), Gaps = 16/273 (5%)
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA 131
L DQ+ +DV++W ++ G +NG +++++ LF MPV+N+VSWN MI G N R+ +A
Sbjct: 39 LTDQV--EDVVSWTTMVAGLLKNGRVEDARALFDRMPVRNVVSWNAMIMGHAQNRRLHEA 96
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
+ FQ MPER+ ++N MI+GF+++G+L A +LF +M +N I++TAM+ G+++ G +
Sbjct: 97 LELFQGMPERDMHSWNTMITGFIQNGKLNYAEKLFGEMREKNAITWTAMMMGYVQHGLSE 156
Query: 192 KA-----RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF----VVT 242
+A + L++ N ++ ++ E +++ + K VF +
Sbjct: 157 EALKVFNKMLANDGLKPNTGTFVTVLRACSDLAGLTEGQQIHQMIS---KTVFQDSXICG 213
Query: 243 AMITGFCKVGMLENARLLFER--IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
+I + K G L A+ +F+ + +D +S+N MIAGYA +G +EA+ LF+ M ++ +
Sbjct: 214 TLINMYPKCGELHTAKXMFDDGLLSQRDLISWNGMIAGYAHHGYGKEAINLFNEMQELGV 273
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+D T V + ACS ++ EG + +++N
Sbjct: 274 CANDVTFVGLLRACSHTGVVEEGLKYFDEILKN 306
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 41/255 (16%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA I ++ ++ A +LF M +D+ +WN +ITG+ QNG L ++ LF M KN +
Sbjct: 81 NAMIMGHAQNRRLHEALELFQGMPERDMHSWNTMITGFIQNGKLNYAEKLFGEMREKNAI 140
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAM-----PERNTATYNAMISGFLKHGRLEEATRLFEQ 168
+W M+ G + + ++A F M + NT T+ ++ L E ++ Q
Sbjct: 141 TWTAMMMGYVQHGLSEEALKVFNKMLANDGLKPNTGTFVTVLRACSDLAGLTEGQQI-HQ 199
Query: 169 MPRRNVISYT----AMLDGFMKKGEVDKARALSD--YMSFKNVVSWTVMITGYVKNERFC 222
M + V + +++ + K GE+ A+ + D +S ++++SW MI GY +
Sbjct: 200 MISKTVFQDSXICGTLINMYPKCGELHTAKXMFDDGLLSQRDLISWNGMIAGYAHHGYGK 259
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
EA LF M + G C + V+F ++ +
Sbjct: 260 EAINLFNEMQEL------------GVC-----------------ANDVTFVGLLRACSHT 290
Query: 283 GVAEEALRLFSGMIK 297
GV EE L+ F ++K
Sbjct: 291 GVVEEGLKYFDEILK 305
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 301/559 (53%), Gaps = 18/559 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A ++ + +++AAR++FD M +D + WN +++G +N E+ +F M
Sbjct: 141 LFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVK 200
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA------TYNAMISG----FLKHGRL 159
I + +A + + + D M + A ++ +I+G + K G +
Sbjct: 201 GGIGFDSTTVAAVLPG--VAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEI 258
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK-- 217
E A LF Q+ + +++SY AM+ G+ E + + L + + I G +
Sbjct: 259 ETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVF 318
Query: 218 ----NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ F N V TA+ T + ++ +E+ARLLF+ K S+N
Sbjct: 319 FPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWN 378
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AMI+GYAQNG+ E+A+ LF M K +++P+ T+ S+ +AC+ L L+ G+ H L+ R
Sbjct: 379 AMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRE 438
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
FE+N+ V A+I MY++CG I +++ F + N V+WN +I+ + HG+ +AL F
Sbjct: 439 SFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLF 498
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
++M + P G+TFLS+L AC HAG V E ++F MV +G P EHY C+VD+L R
Sbjct: 499 NEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGR 558
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
AG L+KA + MP E VWG+LL AC+I+ + L LA+ K+ ELDPQN YV+L
Sbjct: 559 AGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLL 618
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SN+Y+A + + VR ++K + + K + IE+ N +H F GD SHP I+ L
Sbjct: 619 SNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAML 678
Query: 574 KRASVQMKSVDDFVEIATS 592
++ + +M+ E T+
Sbjct: 679 EKLTGKMREAGFQTETGTA 697
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 91/167 (54%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ ++FV +A++ + K + AR +F+ + +D V +N M++G +N +EA+ +F
Sbjct: 137 FGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFG 196
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+K + D T+ +V + LQ L G L ++ GF ++ V + +YS+CG
Sbjct: 197 DMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCG 256
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
I + L F QI P+LVS+N +I+ + + E ++ F ++ ++G
Sbjct: 257 EIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSG 303
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/530 (35%), Positives = 274/530 (51%), Gaps = 45/530 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D N IIT Y + G L +++ +F MP + V+WN +IAG + N D+A F+AM
Sbjct: 312 DPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMV 371
Query: 140 ----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVD 191
+ ++ T+ + + LK G L+ + + R +V +A++D + K G+V+
Sbjct: 372 TSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVE 431
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD---------------- 235
A + +V T MI+GYV N EA LF +
Sbjct: 432 MACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACA 491
Query: 236 --------------------KNVFVVTAMIT-GFCKVGMLENARLLFERIQPKDCVSFNA 274
+NV V + IT + K G L+ A F R+ KD V +N
Sbjct: 492 ALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNL 551
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI ++QNG E A+ LF M + D +L + +AC+ L G++ H V+RN
Sbjct: 552 MIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNS 611
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F ++ V + +I MYS+CG + + F + N VSWN+IIAA+ HG + L F
Sbjct: 612 FISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFH 671
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M G PD +TFL ++SACGHAG V+E + F M + YGI EH+ C+VD+ RA
Sbjct: 672 EMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRA 731
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G+L +A+ + MPF D G WGSLL AC ++ NVEL +LA+K + ELDP NS YV+LS
Sbjct: 732 GRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLS 791
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
N++A AG W V +VR LMKE+GV K YSWI++ H F D HP
Sbjct: 792 NVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHP 841
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 227/447 (50%), Gaps = 16/447 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ ++ I + G I A+ LFD++ +D I WN ++ GY +NG + FQ M
Sbjct: 212 LFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRN 271
Query: 109 --VK-NIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEE 161
VK N VS+ C+++ C + ++ E + N +I+ + K G L +
Sbjct: 272 SCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFD 331
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A ++F+ MP+ + +++ ++ G+++ G D+A AL M V +++ + +K
Sbjct: 332 ARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLK 391
Query: 218 NE--RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ ++C+ + +V++ +A++ + K G +E A F++ D AM
Sbjct: 392 SGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAM 451
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+GY NG+ EAL LF +I+ M P+ T+ SV AC+AL L G++ H +++ G
Sbjct: 452 ISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGL 511
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E V +++ MY++ G + + FR++ + V WN +I +F+Q+G E A+ F Q
Sbjct: 512 ENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQ 571
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
MG +G D ++ + LSAC + + +L +V+ I + + L+D+ S+ G
Sbjct: 572 MGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVR-NSFISDTFVASTLIDMYSKCG 630
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
+L A + M ++ + W S++AA
Sbjct: 631 KLALARSVFDMMDWKNEVS-WNSIIAA 656
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 150/289 (51%), Gaps = 3/289 (1%)
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
K + + G + N C+ R + ++F+ +++I + G + +A+ LF+
Sbjct: 177 KYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFD 236
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ +DC+ +N M+ GY +NG AL F M ++P+ + V + + C+ ++
Sbjct: 237 ELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRA 296
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G Q H LVIR+GFE++ +V N +ITMYS+CG + D+ F + + V+WN +IA + Q
Sbjct: 297 GIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQ 356
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+G ++A+ F M +G D ITF S L + +G + ++ +V+ +G+
Sbjct: 357 NGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVR-HGVPFDVY 415
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVE 490
+ LVDI + G +E A + Q D V ++++ V+N LNVE
Sbjct: 416 LKSALVDIYFKGGDVEMACKTFQQNTL-VDVAVCTAMISGYVLNGLNVE 463
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 2/227 (0%)
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LF R+Q + +N +I G++ G + AL F M+ ++ PD T V AC L
Sbjct: 133 LFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNN 192
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
+ + H L GF ++ + +++I +Y+ G I D++ F ++ + + WN ++
Sbjct: 193 VPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNG 252
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ ++G + AL F +M + P+ ++F+ LLS C G V + L L+++ G
Sbjct: 253 YVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRS-GFES 311
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
++ + S+ G L A +I MP + DT W L+A V N
Sbjct: 312 DPTVANTIITMYSKCGNLFDARKIFDIMP-QTDTVTWNGLIAGYVQN 357
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV + I S+ GK++ AR +FD M K+ ++WN+II Y +G +E +LF M
Sbjct: 617 FVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEA 676
Query: 111 NI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEE 161
I V++ +++ C +D+ YF+ M E + M+ + + GRL E
Sbjct: 677 GIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHE 736
Query: 162 ATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYM 200
A + MP + ++ ++L G V+ A+ S ++
Sbjct: 737 AFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHL 776
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 5/216 (2%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
RQ H V+ G ++++ + ++ MY C D F ++ + WN +I F+
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G ++ AL+FF +M + PD TF ++ ACG V + EL + G
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHEL-ARSMGFHMDLFI 214
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN--LNVELGELAAKKMRE 501
+ L+ + + G + A + +P D +W +L V N N LG +
Sbjct: 215 GSSLIKLYTDNGYIHDAKYLFDELPVR-DCILWNVMLNGYVKNGDFNSALGTFQEMRNSC 273
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+ P NS +V L ++ A G+ R ++ L+ G
Sbjct: 274 VKP-NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSG 308
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 308/616 (50%), Gaps = 104/616 (16%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV + R G + A +F +M +++ +W AI++ + +G+ +E+ +LF+ +
Sbjct: 95 FVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKL--- 151
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--RNTATYNAMISGFLKHG-------RLEE 161
++DD F P + + G HG +
Sbjct: 152 ----------------QLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGS 195
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF--KNVVSWTVMITGYVKNE 219
A ++F +NV+SY M+ G+ + G V+KA+ L D M K+ +SW MI+GY N
Sbjct: 196 ALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNL 255
Query: 220 RFCEA----RELFYR-------------------MPDYDK---------------NVFVV 241
F EA R+L M + N FV
Sbjct: 256 LFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVG 315
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA--------------------- 280
A++ + K L+ A+L F+ + +D ++N +I+GYA
Sbjct: 316 GALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFE 375
Query: 281 --------------QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+NG E ALRLF+ M ++PD T+ + AC+ L + G+Q
Sbjct: 376 PNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQV 435
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H IR G+E +V + A++ MY++CG I + + +I +PNLVS N ++ A+A HGH
Sbjct: 436 HAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHG 495
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++ + F M NGF PD +TFLS+LS+C HAG V + F+LM Y + PS +HYTC
Sbjct: 496 DEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMT-YYNVTPSLKHYTC 554
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VD+LSRAG+L++A+++ + +P + D+ +WG+LL CVI NVELGE+AA+ + EL+P N
Sbjct: 555 IVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNN 614
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
+ YV+L+NLYA AG W D+ R R ++K++G+ K SWIE +H FL D SH
Sbjct: 615 TGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKT 674
Query: 567 DKIHLELKRASVQMKS 582
+ I+ L + M++
Sbjct: 675 EDIYTTLDNLNTHMRT 690
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 168/399 (42%), Gaps = 59/399 (14%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQM--TTKDVITWNAIITGYWQNGFLQESKN 102
FS + V N I G + A++LFDQM KD I+WN++I+GY N E+ +
Sbjct: 203 FSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALS 262
Query: 103 LFQSMPVKNIVS-----------------------------------WNCMIAG------ 121
+F+ + ++ + WN + G
Sbjct: 263 MFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMY 322
Query: 122 --CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVI 175
C D AFD + ER+TAT+N +ISG+ +LE L ++M NV
Sbjct: 323 SKCEDLKAAQLAFD---GVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVY 379
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNERFCEARELFYR- 230
++ ++ G ++ G + A L M ++ + +++ + +++
Sbjct: 380 TWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHS 439
Query: 231 -MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
Y+ +V + A++ + K G +++A ++ RI + VS NAM+ YA +G +E +
Sbjct: 440 IRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGI 499
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF M+ +PD T +SV ++C + G + L+ ++ ++ +
Sbjct: 500 ALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLL 559
Query: 350 SRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
SR G + ++ EL + P+ V W ++ G+ E
Sbjct: 560 SRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVE 598
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 30/210 (14%)
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+D Q D +T S+ +C L L G+Q H ++ GF + V ++ MY R G + D
Sbjct: 56 LDKQIDSSTYASLLESCRTLNL---GKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDD 112
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ L F ++ NL SW I++ HG++E+AL F ++ L+ + F +L CG
Sbjct: 113 ANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCG- 171
Query: 418 AGKVNESMDLFELMVKVYGI-------------------IPSSEHYTCLVDILSRAGQLE 458
+ + EL +++G+ + + Y ++ G +E
Sbjct: 172 ------GLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVE 225
Query: 459 KAWQITQGMPFEA-DTGVWGSLLAACVINL 487
KA ++ M DT W S+++ NL
Sbjct: 226 KAKELFDQMELVGKDTISWNSMISGYADNL 255
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 196/615 (31%), Positives = 333/615 (54%), Gaps = 41/615 (6%)
Query: 7 FHQTYLKRILFPPILRILST--PDSCGNFT--------PHSSN------CLIRL-FSTQY 49
F + L R+ FP + ILS P FT P +++ C +RL
Sbjct: 43 FSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNASAAQLHACALRLGLVRPS 102
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF + + + A R G+IS A ++FD+M+ +DV WNA+++G +N E+ LF M
Sbjct: 103 VFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVG 162
Query: 110 KNI----VSWNCMIAGCID-NDRIDDAFDYFQAMP---ERNTATYNAMISGFLKHGRLEE 161
+ + V+ + ++ C+ D++ + A+ ++ NA+I + K G LEE
Sbjct: 163 EGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEE 222
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK------NVVSWTVMITGY 215
A +F M R+++++ +++ G ++G+ A AL + + +V++ + +
Sbjct: 223 AQCVFHGMECRDLVTWNSIISGCEQRGQT--AAALKMFQGMRGSGVSPDVLTLVSLASAI 280
Query: 216 VKNERFCEAREL----FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ A+ L R D D ++ A++ + K+ +E A+ +F+ + +D VS
Sbjct: 281 AQGGDGRSAKSLHCYVMRRGWDVD-DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVS 339
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+N +I GY QNG+A EA+ + M K + ++ T VSV A S L L +G + H L
Sbjct: 340 WNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALS 399
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
I+ G +V V +I +Y++CG + ++ L F ++ + WN II+ HGH +AL
Sbjct: 400 IKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEAL 459
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
FS+M G PD +TF+SLL+AC HAG V++ F++M Y I+P ++HY C+ D+
Sbjct: 460 TLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADM 519
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L RAGQL++A+ Q MP + D+ VWG+LL AC I+ NVE+G++A++ + ELDP+N Y
Sbjct: 520 LGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYY 579
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS--HPCIDK 568
V++SN+YA G W V VR L++ Q + K +S IE+ V+ F G+ + HP ++
Sbjct: 580 VLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEE 639
Query: 569 IHLELKRASVQMKSV 583
I EL+ +++SV
Sbjct: 640 IQAELRSLLAKIRSV 654
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 192/648 (29%), Positives = 311/648 (47%), Gaps = 120/648 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR ++ + N ++ ++ GK++ A +F+ + KDV++WN++ITGY QNG + S
Sbjct: 40 IIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSS 99
Query: 101 ---KNLFQSMPVKNIVSWNCMIAGCIDNDR------------------------------ 127
LF+ M ++I+ +AG +
Sbjct: 100 YTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSL 159
Query: 128 ---------IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN----- 173
++D F MPERNT T++ M+SG+ GR+EEA ++F R
Sbjct: 160 VGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD 219
Query: 174 ------------------------------------VISYTAMLDGFMKKGEVDKARALS 197
V A++ + K +++A +
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMF 279
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------------ 233
D +N ++W+ M+TGY +N EA +LF RM P
Sbjct: 280 DSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLE 339
Query: 234 -------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
+++++F TA++ + K G L +AR F+ +Q +D + ++I+GY
Sbjct: 340 EGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYV 399
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
QN EEAL L+ M + P+D T+ SV ACS+L L G+Q H I++GF V
Sbjct: 400 QNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVP 459
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
+ +A+ TMYS+CG + D L FR+ + ++VSWN +I+ + +G ++AL F +M G
Sbjct: 460 IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG 519
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+PD +TF++++SAC H G V F +M G+ P +HY C+VD+LSRAGQL++A
Sbjct: 520 MEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA 579
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
+ + + +W LL+AC + ELG A +K+ L + S+ YV LS +Y A
Sbjct: 580 KEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTAL 639
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDK 568
G RDV RV M+ GV+K+ SWIE+ N+ H F+ GD HP I++
Sbjct: 640 GRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEE 687
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 9/199 (4%)
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ ++ P +TL+ T S + L GR H +IR G + N ++ Y++CG +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA---LIFFSQMGLNGFDPDGITFLSLLS 413
+ F I ++VSWN++I ++Q+G + + F +M P+ T +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 414 ACGHAGKVNESMDLFELMVKV--YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
A L+VK+ +G I T LV + +AG +E ++ MP E
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVD---TSLVGMYCKAGLVEDGLKVFAYMP-ER 182
Query: 472 DTGVWGSLLAACVINLNVE 490
+T W ++++ VE
Sbjct: 183 NTYTWSTMVSGYATRGRVE 201
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 295/546 (54%), Gaps = 44/546 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV NA+I Y G +++++ +F+SM K+ VSWN +++G + ND DA ++FQ M
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ 344
Query: 140 ER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY----TAMLDGFMKKGEVD 191
+ + + MI+ + L + + + S +++D + K V
Sbjct: 345 DSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVK 404
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP----DYDK----------- 236
+ +YM K+++SWT +I GY +NE +A L ++ D D
Sbjct: 405 YMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS 464
Query: 237 ---------------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
++ + A++ + ++ +++ AR +FE I KD VS+ +M
Sbjct: 465 GLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSM 524
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I NG+A EAL LF+ +I+ +++PD TLVSV A +AL L +G++ H +IR GF
Sbjct: 525 ITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGF 584
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ N+++ MY+RCG + ++ F + +L+ W ++I A HG + A+ FS+
Sbjct: 585 FLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSK 644
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M PD ITFL+LL AC H+G V E FE+M Y + P EHY CLVD+L+R+
Sbjct: 645 MTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSN 704
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
LE+A+ + MP E VW +LL AC I+ N +LGE+AAKK+ +L+ +NS YV++SN
Sbjct: 705 SLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSN 764
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+AA G W DV VR +MK + K+ SWIE+ NK+H F+ D SHP + I+L+L +
Sbjct: 765 TFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQ 824
Query: 576 ASVQMK 581
+ +K
Sbjct: 825 FTKLLK 830
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 226/496 (45%), Gaps = 38/496 (7%)
Query: 12 LKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQ-----YVFVNNAKISALSRAGKI 66
L FP +L+ +CG F C I + + +VFV NA I+ ++ G +
Sbjct: 146 LDAFTFPCVLK------ACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDL 199
Query: 67 SAARQLFDQ--MTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIA 120
AR LFD M D ++WN+II+ + G E+ +LF+ M N ++ +
Sbjct: 200 GGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQ 259
Query: 121 GCIDNDRIDDAFDYFQAMPERN--TATY--NAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
C I + + N T Y NA+I+ + G++E+A R+F+ M ++ +S
Sbjct: 260 ACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVS 319
Query: 177 YTAMLDGF----MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+ +L G M ++ + + D + VS MI ++ E+
Sbjct: 320 WNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAI 379
Query: 233 DY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+ D N+ + ++I + K ++ FE + KD +S+ +IAGYAQN +AL
Sbjct: 380 KHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALN 439
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
L + M D + S+ ACS L+ ++ H V++ G A++ + NA++ +Y
Sbjct: 440 LLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYG 498
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+ + F I+S ++VSW ++I +G +AL F+ + +PD IT +S
Sbjct: 499 ELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVS 558
Query: 411 LLSACGHAGKVNESMDLFELMVK----VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
+L A + + ++ +++ + G+I +S LVD+ +R G +E A I
Sbjct: 559 VLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANS-----LVDMYARCGTMENARNIFNY 613
Query: 467 MPFEADTGVWGSLLAA 482
+ + D +W S++ A
Sbjct: 614 VK-QRDLILWTSMINA 628
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 234/500 (46%), Gaps = 42/500 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF++ + + G A ++FD+M+ + + TWNA+I G E+ L++ M V
Sbjct: 82 VFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRV 141
Query: 110 KNI----VSWNCMIAGC--IDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEE 161
+ ++ C++ C R+ + NA+I+ + K G L
Sbjct: 142 LGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGG 201
Query: 162 ATRLFEQ--MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
A LF+ M + + +S+ +++ + +GE +A +L M V S T +V
Sbjct: 202 ARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYT---FVSAL 258
Query: 220 RFCEARELFYRM----------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
+ CE F ++ ++ +V+V A+I + G +E+A +F+ + KDC
Sbjct: 259 QACEG-PTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDC 317
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+N +++G QN + +A+ F M +PD +++++ A L G + H
Sbjct: 318 VSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAY 377
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
I++G ++N+ + N++I MY +C + AF + +L+SW TIIA +AQ+ + A
Sbjct: 378 AIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDA 437
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L ++ L D D + S+L AC +G +E +L+ +++G + L+
Sbjct: 438 LNLLRKVQLEKMDVDPMMIGSILLAC--SGLKSE-----KLIKEIHGYVLKGGLADILIQ 490
Query: 450 --ILSRAGQL---EKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGELAAKKMR-EL 502
I++ G+L + A + + + D W S++ CV N L +E EL + +
Sbjct: 491 NAIVNVYGELALVDYARHVFESIN-SKDIVSWTSMITCCVHNGLAIEALELFNSLIETNI 549
Query: 503 DPQNSAVYVMLSNLYAAAGM 522
+P + ++S LYAAA +
Sbjct: 550 EPD---LITLVSVLYAAAAL 566
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 16/267 (5%)
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F + +Y +VF+ T + + K G +A +F+++ + ++NAMI G E
Sbjct: 72 FLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVE 131
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
A+ L+ M + + D T V AC A + G + H + ++ G+ V VCNA+I
Sbjct: 132 AIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIA 191
Query: 348 MYSRCGGILDSELAFRQ--IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
MY++CG + + + F + + VSWN+II+A G +AL F +M G + +
Sbjct: 192 MYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNT 251
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT------CLVDILSRAGQLEK 459
TF+S L AC E ++ ++ +I S H+T L+ + + GQ+E
Sbjct: 252 YTFVSALQAC-------EGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMED 304
Query: 460 AWQITQGMPFEADTGVWGSLLAACVIN 486
A ++ + M F+ D W +LL+ V N
Sbjct: 305 AERVFKSMLFK-DCVSWNTLLSGMVQN 330
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 294/549 (53%), Gaps = 46/549 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA----FDYF 135
D++ NA +T Y + ++ F++M ++N+ S N +++G D + D
Sbjct: 124 DILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLL 183
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS----YTAMLDGFMKKGEVD 191
E N T+ +++ G L E + Q+ + + + ++++ + K G +
Sbjct: 184 VEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSAN 243
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------ 233
A + + ++VVSWT +ITG+V E + +F +M P+
Sbjct: 244 YACKVFGEIPERDVVSWTALITGFVA-EGYGSGLRIFNQMLAEGFNPNMYTFISILRSCS 302
Query: 234 -------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
D N FV TA++ + K LE+A +F R+ +D ++
Sbjct: 303 SLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTV 362
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
++AGYAQ+G E+A++ F M + ++P++ TL S + CS + L+ GRQ H + I+ G
Sbjct: 363 IVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG 422
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
++ V +A++ MY++CG + D+E+ F + S + VSWNTII ++QHG KAL F
Sbjct: 423 QSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFE 482
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
M G PD +TF+ +LSAC H G + E F + K+YGI P+ EHY C+VDIL RA
Sbjct: 483 AMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRA 542
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G+ + + M ++ +W ++L AC ++ N+E GE AA K+ EL+P+ + Y++LS
Sbjct: 543 GKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLS 602
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N++AA GMW DVT VR LM +GV K+ SW+E+ +VH FL D SHP I +IHL+L+
Sbjct: 603 NMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQ 662
Query: 575 RASVQMKSV 583
++ SV
Sbjct: 663 DLHQKLMSV 671
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 173/351 (49%), Gaps = 19/351 (5%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK--- 110
N+ ++ ++ G + A ++F ++ +DV++W A+ITG+ G+ +F M +
Sbjct: 230 NSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFN 288
Query: 111 -NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN-----AMISGFLKHGRLEEATR 164
N+ ++ ++ C +D A +N+ N A++ + K+ LE+A
Sbjct: 289 PNMYTFISILRSCSSLSDVDLG-KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAET 347
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNER 220
+F ++ +R++ ++T ++ G+ + G+ +KA M + V + ++G +
Sbjct: 348 IFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIAT 407
Query: 221 FCEARELFYRMPDYDK--NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
R+L + ++FV +A++ + K G +E+A ++F+ + +D VS+N +I G
Sbjct: 408 LDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICG 467
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEA 337
Y+Q+G +AL+ F M+ PD+ T + V +ACS + L+ EG++ + L G
Sbjct: 468 YSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITP 527
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYE 387
+ ++ + R G + E ++ + N++ W T++ A HG+ E
Sbjct: 528 TIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIE 578
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 162/368 (44%), Gaps = 28/368 (7%)
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
W+ ++ + + + A + MP ++ +N +S L+EA +LF M +
Sbjct: 27 WSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRI 86
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
L+ F+ + A +L D Y ++ C + F
Sbjct: 87 -----RLNQFIFASLISAAASLGD--------------NHYGESIHACVCKYGF------ 121
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ ++ + A +T + K +EN F+ + ++ S N +++G+ ++ R+
Sbjct: 122 ESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQ 181
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
++ +P+ T +S+ C++ LNEG+ H VI++G + + N+++ +Y++CG
Sbjct: 182 LLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGS 241
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ F +I ++VSW +I F G Y L F+QM GF+P+ TF+S+L +
Sbjct: 242 ANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRS 300
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C V+ + +VK + + T LVD+ ++ LE A I + + D
Sbjct: 301 CSSLSDVDLGKQVHAQIVK-NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLF 358
Query: 475 VWGSLLAA 482
W ++A
Sbjct: 359 AWTVIVAG 366
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 42/218 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A + ++ G + A +FD + ++D ++WN II GY Q+G ++ F++M
Sbjct: 427 MFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAM-- 484
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+D + D T+ ++S G +EE + F +
Sbjct: 485 -------------LDEGTVPD------------EVTFIGVLSACSHMGLIEEGKKHFNSL 519
Query: 170 PRRNVIS-----YTAMLDGFMKKGEVDKARALSDYMSF-KNVVSWTVMITGYVK---NER 220
+ I+ Y M+D + G+ + + + M NV+ W ++ G K N
Sbjct: 520 SKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVL-GACKMHGNIE 578
Query: 221 FCE--ARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
F E A +LF P+ D N +++ M F GM ++
Sbjct: 579 FGERAAMKLFELEPEIDSNYILLSNM---FAAKGMWDD 613
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV A + ++ + A +F+++ +D+ W I+ GY Q+G +++ F M +
Sbjct: 327 FVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQRE 386
Query: 111 ----NIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEA 162
N + ++GC +D +A + +A++ + K G +E+A
Sbjct: 387 GVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA 446
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
+F+ + R+ +S+ ++ G+ + G+ KA
Sbjct: 447 EVVFDGLVSRDTVSWNTIICGYSQHGQGGKA 477
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 299/555 (53%), Gaps = 28/555 (5%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQN---------GFLQ 98
Q +FV I+A S +++A +F+ + +V +N+II + N F Q
Sbjct: 51 QDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNSSHRSLPFNAFFQ 110
Query: 99 ESKN-LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISG 152
KN LF + ++ ++ C + A E+ + N++I
Sbjct: 111 MQKNGLF-----PDNFTYPFLLKACSGPSSLP-LVRMIHAHVEKIGFYGDIFVPNSLIDS 164
Query: 153 FLKHGR--LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
+ + G L+ A LF M R+V+++ +M+ G ++ GE+ A L D M +++VSW
Sbjct: 165 YSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDRDMVSWNT 224
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
M+ GY K A ELF RMP +N+ + M+ G+ K G ++ AR+LF+R K+ V
Sbjct: 225 MLDGYAKAGEMDTAFELFERMPW--RNIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVV 282
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+ +IAGYA+ G+A EA L+ M + M+PDD L+S+ AC+ +L G++ H +
Sbjct: 283 LWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGMLGLGKRIHASM 342
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDS--ELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
R F V NA I MY++CG LD+ ++ + ++VSWN++I FA HGH EK
Sbjct: 343 RRWRFRCGAKVLNAFIDMYAKCG-CLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEK 401
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL FS M GF+PD TF+ LL AC HAG VNE F M KVYGI+P EHY C++
Sbjct: 402 ALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMM 461
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
D+L R G L++A+ + + MP E + + G+LL AC ++ +V+L +++ +L+P +
Sbjct: 462 DLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDLARAVCEQLFKLEPSDPG 521
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDK 568
Y +LSN+YA AG W +V VRL MK G K S IE+ +VH F D SHP D
Sbjct: 522 NYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEVEEEVHEFTVFDQSHPKSDD 581
Query: 569 IHLELKRASVQMKSV 583
I+ + R ++ V
Sbjct: 582 IYQMIDRLVQDLRQV 596
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 195/435 (44%), Gaps = 63/435 (14%)
Query: 23 ILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVI 82
++ + CGN + L + V N+ I L R G++ A +LFD+M +D++
Sbjct: 161 LIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDRDMV 220
Query: 83 TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN 142
+WN ++ GY + G + + LF+ MP +NIVSW+ M+ G +D A F P +N
Sbjct: 221 SWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPVKN 280
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
+ +I+G+ + G EAT L+ +M + DGF+ + A A S +
Sbjct: 281 VVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPD----DGFLLS--ILAACAESGMLGL 334
Query: 203 KNVVSWTVMITGYVKNERF-CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
I ++ RF C A+ V+ A I + K G L+ A +F
Sbjct: 335 GK------RIHASMRRWRFRCGAK--------------VLNAFIDMYAKCGCLDAAFDVF 374
Query: 262 E-RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
+ KD VS+N+MI G+A +G E+AL LFS M++ +PD T V + AC+ L+
Sbjct: 375 SGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLV 434
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
NEGR+ + GI+ P + + ++
Sbjct: 435 NEGRK-------------------YFYSMEKVYGIV-----------PQVEHYGCMMDLL 464
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
+ GH ++A + M + +P+ I +LL+AC V+ + + E + K+ P
Sbjct: 465 GRGGHLKEAFMLLRSMPM---EPNAIILGTLLNACRMHNDVDLARAVCEQLFKLEPSDPG 521
Query: 441 SEHYTCLVDILSRAG 455
+ Y+ L +I ++AG
Sbjct: 522 N--YSLLSNIYAQAG 534
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C+ L +N Q H V++ ++ V +I +S C + + F + PN+ +
Sbjct: 31 CTNLDSVN---QIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLY 87
Query: 374 NTIIAAFAQHGHYEKALIF--FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
N+II A A H ++L F F QM NG PD T+ LL AC S+ L ++
Sbjct: 88 NSIIRAHA-HNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGP----SSLPLVRMI 142
Query: 432 ------VKVYG--IIPSSEHYTCLVDILSRAGQ--LEKAWQITQGMPFEADTGVWGSLLA 481
+ YG +P+S L+D SR G L+ A + M E D W S++
Sbjct: 143 HAHVEKIGFYGDIFVPNS-----LIDSYSRCGNAGLDGAMSLFLAME-ERDVVTWNSMIG 196
Query: 482 ACVINLNVELGEL--AAKKMRELDPQNSAVYVMLSNLYAAAG 521
V GEL A K E+ ++ + + + YA AG
Sbjct: 197 GL-----VRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKAG 233
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 195/610 (31%), Positives = 301/610 (49%), Gaps = 90/610 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQM----TTKDVITWNAIITGYWQNGFLQESKNLFQ 105
VF+ N +S + G+ A + M D +TWNAII+GY Q+G +E+ F
Sbjct: 256 VFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFL 315
Query: 106 SMP-----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISG---- 152
M N+VSW +IAG N +A F+ M + N+ T + +S
Sbjct: 316 EMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNL 375
Query: 153 -FLKHGR-------------------------------LEEATRLFEQMPRRNVISYTAM 180
L+HGR +E A R F + + +++S+ AM
Sbjct: 376 SLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAM 435
Query: 181 LDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNERFCEARELFYRMPDY-- 234
L G+ +G ++A L M F+ ++++W ++TG+ + A E F RM
Sbjct: 436 LAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGM 495
Query: 235 DKNVFVVT-----------------------------------AMITGFCKVGMLENARL 259
D N ++ A+I+ + LE A
Sbjct: 496 DPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACS 555
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F + +D V +N++I+ AQ+G + AL L M +++ + T+VS ACS L
Sbjct: 556 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 615
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L +G++ H +IR G + + N++I MY RCG I S F + +LVSWN +I+
Sbjct: 616 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 675
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ HG A+ F G P+ ITF +LLSAC H+G + E F++M Y + P
Sbjct: 676 YGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 735
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+ E Y C+VD+LSRAGQ + + + MPFE + VWGSLL AC I+ N +L E AA+ +
Sbjct: 736 AVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYL 795
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
EL+PQ+S YV+++N+Y+AAG W D ++R LMKE+GVTK SWIE+ K+H F+ G
Sbjct: 796 FELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVG 855
Query: 560 DMSHPCIDKI 569
D SHP +++I
Sbjct: 856 DTSHPLMEQI 865
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 207/423 (48%), Gaps = 51/423 (12%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ + + + G + AR++FD+M+ ++V +W AI+ Y G +E+ LF M +
Sbjct: 125 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE 184
Query: 111 NI----VSWNCMIAGC--IDNDRI-DDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEA 162
+ + + C + N R+ D +DY ++ E N+ +++ F+K GR++ A
Sbjct: 185 GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIA 244
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKN 218
R FE++ ++V + M+ G+ KGE KA M V V+W +I+GY ++
Sbjct: 245 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQS 304
Query: 219 ERFCEARELFYRM---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+F EA + F M D+ NV VS+ A+
Sbjct: 305 GQFEEASKYFLEMGGLKDFKPNV-------------------------------VSWTAL 333
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR-NG 334
IAG QNG EAL +F M+ ++P+ T+ S +AC+ L LL GR+ H I+
Sbjct: 334 IAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE 393
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
++++ V N+++ Y++C + + F I +LVSWN ++A +A G +E+A+ S
Sbjct: 394 LDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLS 453
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M G +PD IT+ L++ G +++ F+ M + G+ P++ T + L+
Sbjct: 454 EMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSM-GMDPNT---TTISGALAAC 509
Query: 455 GQL 457
GQ+
Sbjct: 510 GQV 512
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 11/271 (4%)
Query: 281 QNGVAEEALRLFSGMIKMDM-QPDDATLV--SVFTACSALQLLNEGRQSHVLVIRNGFEA 337
+NGV A L S MD+ PD+ + S+ C L L G Q H ++ NG +
Sbjct: 66 RNGVLNNAAMLLS---SMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDV 122
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ + ++ +Y + G + D+ F ++ N+ SW I+ + G YE+ + F M
Sbjct: 123 CEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMV 182
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
G PD F + AC D+++ M+ + G +S ++D+ + G++
Sbjct: 183 NEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSI-GFEGNSCVKGSILDMFIKCGRM 241
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVIN--LNVELGELAAKKMRELDPQNSAVYVMLSN 515
+ A + + + F+ D +W +++ L ++ K+ + P ++S
Sbjct: 242 DIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG 300
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
YA +G + + ++ L M K SW
Sbjct: 301 -YAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 295/532 (55%), Gaps = 14/532 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQES---KNL 103
F+ NA I + S A +F+ M D +++ ++ + G ++E L
Sbjct: 88 FLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGL 147
Query: 104 FQSMPV-KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
M + ++ NC++ + + A F M +R++ ++N+MI G++KHG ++ A
Sbjct: 148 LGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSA 207
Query: 163 TRLFEQMP--RRNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNVVSWTVMITGYVKNE 219
LF+ MP ++N+IS+ +M+ G+ + E + A L + M ++++SW MI G VK
Sbjct: 208 RELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCG 267
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
+ A LF +MP D V M+ G+ K+G ++ AR LF+ + +D +S NAM+AGY
Sbjct: 268 KMENAHHLFNQMPKRD--VVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGY 325
Query: 280 AQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
QNG EAL F M+ + ++ PD+ATL+ +A + L +EG H + NGF +
Sbjct: 326 VQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLS 385
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+ A+I MY++CG I ++ F I ++ WN II A HG E A F +M
Sbjct: 386 EKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEK 445
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
PD ITF+ +L+AC HAG V E + FELM +V+ + P +HY C+VDIL RAG +E
Sbjct: 446 LFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVE 505
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+A + + MP E + VW +LL+AC + N +GE AK + +D N + YV+LSN+YA
Sbjct: 506 EAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYA 565
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
GMW DV R+R++MK++ + K S IE+ VH F D SHP + +I+
Sbjct: 566 GFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVREIY 617
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 244/512 (47%), Gaps = 86/512 (16%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+ N + R G + ARQLFD+M +D +++N++I GY ++G ++ ++ LF MP+
Sbjct: 157 VFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPM 216
Query: 110 --KNIVSWNCMIAGCIDNDR-IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
KN++SWN MI+G ++ + A++ F+ MP+R+ ++N+MI G +K G++E A LF
Sbjct: 217 EQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLF 276
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
QMP+R+V+S+ M+DG+ K GE+D AR L D M ++V+S M+ GYV+N EA
Sbjct: 277 NQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALN 336
Query: 227 LFYRM-------PD----------------YDKNV----------FVVT-----AMITGF 248
F+ M PD +D+ V F ++ A+I +
Sbjct: 337 FFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMY 396
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G ++NA +FE I K +NA+I G A +G+ E A LF M K+ ++PDD T +
Sbjct: 397 AKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFI 456
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-- 366
V AC+ L+ EG L+ R++H
Sbjct: 457 GVLNACNHAGLVKEGLMCFELM--------------------------------RRVHKV 484
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
P L + ++ + GH E+A F +M + +P+ + + +LLSAC +
Sbjct: 485 EPKLQHYGCMVDILGRAGHVEEAKKFVEKMPI---EPNDVVWRTLLSACRNHENFTIGEP 541
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ + ++ V PSS Y L +I + G ++I M + G I
Sbjct: 542 VAKHLISVDSYNPSS--YVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPG----CSQIE 595
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
L + E + PQ +Y ML +L A
Sbjct: 596 LEGNVHEFFVRDKSH--PQVREIYSMLDSLSA 625
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 11/160 (6%)
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA--------FRQIH--S 367
+ L++ Q H +I GF N S+ +I +S E A F + H
Sbjct: 25 KTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQ 84
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N WN II +F+ +A + F+ M NG D +F +L AC G + E M +
Sbjct: 85 DNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQI 144
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
L+ ++ I CL+ + R G L A Q+ M
Sbjct: 145 HGLLGRME-IGSDVFLQNCLMCLYLRCGCLGIARQLFDRM 183
>gi|334184919|ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
gi|218546767|sp|O22137.2|PP202_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g45350, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 4; Flags: Precursor
gi|330255448|gb|AEC10542.1| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
Length = 613
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/478 (37%), Positives = 265/478 (55%), Gaps = 33/478 (6%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA-----GCIDNDRIDDAFDYFQAMPERNT 143
TG W + FLQ NC+I GC+ R F MP+R++
Sbjct: 150 TGLWSDLFLQ-----------------NCLIGLYLKCGCLGLSR-----QMFDRMPKRDS 187
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYM 200
+YN+MI G++K G + A LF+ MP +N+IS+ +M+ G+ + + VD A L M
Sbjct: 188 VSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM 247
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
K+++SW MI GYVK+ R +A+ LF MP D V MI G+ K+G + +A+ L
Sbjct: 248 PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRD--VVTWATMIDGYAKLGFVHHAKTL 305
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQL 319
F+++ +D V++N+M+AGY QN EAL +FS M K + PDD TLV V A + L
Sbjct: 306 FDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR 365
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L++ H+ ++ F + A+I MYS+CG I + L F I + ++ WN +I
Sbjct: 366 LSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG 425
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
A HG E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P
Sbjct: 426 LAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEP 485
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HY C+VDILSR+G +E A + + MP E + +W + L AC + E GEL AK +
Sbjct: 486 RLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHL 545
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ GMW+DV RVR +MKE+ + K SWIE+ +VH F
Sbjct: 546 ILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFF 603
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 217/412 (52%), Gaps = 50/412 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + +RQ+FD+M +D +++N++I GY + G + ++ LF MP
Sbjct: 156 LFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPM 215
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+KN++SWN MI+G +D +D A F MPE++ ++N+MI G++KHGR+E+A LF
Sbjct: 216 EMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLF 275
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ MPRR+V+++ M+DG+ K G V A+ L D M ++VV++ M+ GYV+N+ EA E
Sbjct: 276 DVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALE 335
Query: 227 LF-------YRMPD--------------------YDKNVFVV-----------TAMITGF 248
+F + +PD D ++++V A+I +
Sbjct: 336 IFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMY 395
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G +++A L+FE I+ K +NAMI G A +G+ E A + + ++ ++PDD T V
Sbjct: 396 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFV 455
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SR G I ELA I
Sbjct: 456 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSI---ELAKNLIEE 512
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSA 414
PN V W T + A + H +E + + L G++P LS + A
Sbjct: 513 MPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 564
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ +D +NA+I ++ +AL L M++ + D +L V ACS L + G
Sbjct: 82 EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGM 141
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H + + G +++ + N +I +Y +CG + S F ++ + VS+N++I + + G
Sbjct: 142 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 201
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE-- 442
A F M + + I++ S++S G+A ++ D ++ K++ +P +
Sbjct: 202 LIVSARELFDLMPMEM--KNLISWNSMIS--GYA----QTSDGVDIASKLFADMPEKDLI 253
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ ++D + G++E A + MP D W +++
Sbjct: 254 SWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMI 290
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 299/561 (53%), Gaps = 48/561 (8%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----PVKNIVSWNCMIAGCID 124
A +F+ +++ WN ++ G + L ++ M V N ++ ++ C
Sbjct: 36 AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95
Query: 125 NDRIDDAFD-YFQAMP---ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
+ ++ + Q M E + + ++IS + ++GRLE+A ++F+ +R+V+S TA+
Sbjct: 96 SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD- 233
+ G+ +G+V AR + D ++ ++VVSW MITGYV+N + EA ELF M PD
Sbjct: 156 ITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDE 215
Query: 234 -------------------------------YDKNVFVVTAMITGFCKVGMLENARLLFE 262
+ ++ +V A I + K G +E A LFE
Sbjct: 216 GTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE 275
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ KD VS+N +I GY + +EAL LF M++ P+D T++SV AC+ L ++
Sbjct: 276 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDI 335
Query: 323 GRQSHVLVIR--NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
GR HV + + G ++ ++I MY++CG I + F + +L SWN +I F
Sbjct: 336 GRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGF 395
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A HG A FS+M NG +PD IT + LLSAC H+G ++ +F+ + + Y I P
Sbjct: 396 AMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPK 455
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
EHY C++D+L AG ++A +I MP E D +W SLL AC ++ N+EL E A+K+
Sbjct: 456 LEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLM 515
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
E++P+NS YV+LSN+YA AG W DV R+R ++ +G+ K S IEI + VH F+ GD
Sbjct: 516 EIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGD 575
Query: 561 MSHPCIDKIHLELKRASVQMK 581
HP +I+ L+ V ++
Sbjct: 576 KLHPQSREIYRMLEEMDVLLE 596
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 238/539 (44%), Gaps = 96/539 (17%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+ + + IS +R G++ AR++FD + +DV++ A+ITGY G ++ ++ +F + +
Sbjct: 119 YAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITER 178
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRLF 166
++VSWN MI G ++N ++A + F+ M N T +++S + G +E +
Sbjct: 179 DVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIH 238
Query: 167 EQMPRRNVISYT-----AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ + + A + + K G+V+ A L + +S K+VVSW +I GY +
Sbjct: 239 TLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLY 298
Query: 222 CEARELFYRM------PD--------------------------YDKNVFVV-------T 242
EA LF M P+ DK + V T
Sbjct: 299 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRT 358
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A +F + K S+NAMI G+A +G A A LFS M K ++P
Sbjct: 359 SLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEP 418
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD TLV + +ACS LL+ GR + +V Y+
Sbjct: 419 DDITLVGLLSACSHSGLLDLGRH---------------IFKSVTQDYNI----------- 452
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+P L + +I G +++A M + +PDG+ + SLL AC K++
Sbjct: 453 ----TPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPM---EPDGVIWCSLLKAC----KMH 501
Query: 423 ESMDLFELMV-KVYGIIP-SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+++L E K+ I P +S Y L +I + AG+ E +I + + + V G
Sbjct: 502 GNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPG--- 558
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSN---LYAAAGMWRDVTRVRLLMKEQ 536
I ++ + E +L PQ+ +Y ML L AG D + V M+E+
Sbjct: 559 -CSSIEIDSVVHEFIIGD--KLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEE 614
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/507 (33%), Positives = 282/507 (55%), Gaps = 32/507 (6%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N+++ Y + G L+ +K +F M ++N SWN MI+ ++ R+D A F+ + ER+
Sbjct: 146 NSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIV 205
Query: 145 TYNAMISGFLKHGRLEEATRLFEQM-------PRR-------------NVISYTAMLDGF 184
++N+MI+G +HG EA + F + P R +S+ + G+
Sbjct: 206 SWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGY 265
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAM 244
+ + D + A+ + +I+ Y K+ AR + + D +V TA+
Sbjct: 266 IVRTMFDASGAVGN-----------ALISMYAKSGGVEIARRIIEQSGISDLDVIAFTAL 314
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
+ G+ K+G + AR +F ++ D V++ AMI GY QNG+ +A+ +F M+ +P+
Sbjct: 315 LNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNS 374
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
TL ++ +A S++ LN G+Q H IR+G + SV NA+ TMY++ G I + F
Sbjct: 375 FTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNL 434
Query: 365 I-HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+ + + VSW ++I A AQHG E+A+ F QM G PD IT++ +LSAC H G V +
Sbjct: 435 LRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQ 494
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
F+LM V+ I P+ HY C+VD+ RAG L++A++ + MP E D WGSLL++C
Sbjct: 495 GRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSC 554
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
+ NV+L ++AA+++ ++P NS Y L+N+Y++ G W D ++R LMK +GV K+
Sbjct: 555 KVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQG 614
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKIH 570
SW++I NK H F D HP D+I+
Sbjct: 615 LSWVQIQNKTHVFGVEDGLHPQKDEIY 641
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 205/452 (45%), Gaps = 55/452 (12%)
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
T V N ++ Y + GF ++ +LF MPVK SWN +++G +++ A F
Sbjct: 7 TFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDL 66
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
+P R++ ++ +I G+ + GR E+A ++F M + V+ L + +R +
Sbjct: 67 IPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIG 126
Query: 198 DYMSFKNVVSWTV-------------MITGYVKNERFCEARELFYRMPDYDKNVFVVTAM 244
K V S+ V ++ Y K A+ +F RM +N AM
Sbjct: 127 -----KKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMK--LRNTSSWNAM 179
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPD 303
I+ G ++ A FE + +D VS+N+MIAG Q+G EAL+ FS ++K ++PD
Sbjct: 180 ISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPD 239
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI-------- 355
+L S +AC+ L+ L+ G+Q H ++R F+A+ +V NA+I+MY++ GG+
Sbjct: 240 RFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIE 299
Query: 356 ------LD-------------------SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
LD + F + P++V+W +I + Q+G A+
Sbjct: 300 QSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAI 359
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F M G P+ T ++LSA +N + ++ G S L +
Sbjct: 360 EVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIR-SGEALSPSVGNALTTM 418
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++AG + A ++ + DT W S++ A
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMA 450
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 231/500 (46%), Gaps = 119/500 (23%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V N+ ++ ++ G + A+ +FD+M ++ +WNA+I+ + G + + F+ +
Sbjct: 142 VPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSE 201
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PER--------------------- 141
++IVSWN MIAGC + ++A +F ++ P+R
Sbjct: 202 RDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQ 261
Query: 142 ------------NTATYNAMISGFLKHGRLEEATRLFEQ--MPRRNVISYTAMLDGFMKK 187
+ A NA+IS + K G +E A R+ EQ + +VI++TA+L+G++K
Sbjct: 262 IHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKL 321
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMI 245
G++ AR + + + +VV+WT MI GYV+N +A E+F M N F + AM+
Sbjct: 322 GDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAML 381
Query: 246 -----------------------------------TGFCKVGMLENARLLFERI-QPKDC 269
T + K G + AR +F + Q +D
Sbjct: 382 SASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDT 441
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+ +MI AQ+G+ EEA+ LF M+ + ++PD T V V +AC+ L+ +GR S+
Sbjct: 442 VSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGR-SYFD 500
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+++N + + P L + ++ F + G ++A
Sbjct: 501 LMKNVHKID-----------------------------PTLSHYACMVDLFGRAGLLQEA 531
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP--SSEHYTCL 447
F M + +PD I + SLLS+C KV +++DL ++ + +I +S Y+ L
Sbjct: 532 YKFVENMPM---EPDVIAWGSLLSSC----KVYKNVDLAKVAAERLLLIEPNNSGAYSAL 584
Query: 448 VDILSRAGQLEKAWQITQGM 467
++ S G+ + A +I + M
Sbjct: 585 ANVYSSCGKWDDAAKIRKLM 604
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+++ G +V + N ++ +Y++ G LD+ F ++ SWNTI++ +A+ G EKA
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
F + + D +++ +++ G+ +++ +F MVK
Sbjct: 61 HQVFDLIPVR----DSVSWTTIIVGYNQMGRFEDAIKIFVDMVK 100
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/575 (32%), Positives = 295/575 (51%), Gaps = 72/575 (12%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM- 107
+VFV N + A + G ++AAR++F +M KD +T+NA++ G + G ++ LF +M
Sbjct: 169 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228
Query: 108 --------------------------------------PVKNIVSWNCMIAGCIDNDRID 129
V N+ N ++ D +D
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFM 185
D F MPER+ +YN +I+ + + RLF +M + R V+ Y ML
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS--- 345
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
A +L D K + + V++ G + + A+I
Sbjct: 346 ------VAGSLPDVHIGKQIHAQLVLL-GLASED-------------------LLGNALI 379
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K GML+ A+ F K +S+ A+I GY QNG EEAL+LFS M + ++PD A
Sbjct: 380 DMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRA 439
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T S+ A S+L ++ GRQ H +IR+G++++V + ++ MY++CG + ++ F ++
Sbjct: 440 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 499
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
N +SWN +I+A+A +G + A+ F M GF+PD +TFLS+L+AC H G +E M
Sbjct: 500 PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 559
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
F LM Y I P EHY C++D L R G + ++ MPF+AD +W S+L +C I
Sbjct: 560 KYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRI 619
Query: 486 NLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYS 545
+ N EL +AA K+ ++P ++ YV+LSN+YA AG W D V+ +M+++GV K+ YS
Sbjct: 620 HGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYS 679
Query: 546 WIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
W+EI K++ F D++ P ID+I EL R +M
Sbjct: 680 WVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEM 714
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 218/473 (46%), Gaps = 50/473 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + +L +G + AR +FDQM K++ + N I++ Y +G L +++LF S P +N
Sbjct: 47 NLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNAT 106
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATY--------------------- 146
+W M+ R DA F+AM P+R T T
Sbjct: 107 TWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGL 166
Query: 147 -------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL--- 196
N ++ + KHG L A R+F +M ++ ++Y AM+ G K+G +A L
Sbjct: 167 DTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAA 226
Query: 197 -------SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
+ + +F ++++ + + + L R NVFV +++ +
Sbjct: 227 MRRAGIPATHFTFSSILTVAAGMAHLLLGH---QVHALVLRSTSV-LNVFVNNSLLDFYS 282
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K L++ R LF+ + +D VS+N +IA YA N A LRLF M K+ +
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ + +L ++ G+Q H ++ G + + NA+I MYS+CG + ++ F +
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS 402
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+SW +I + Q+G +E+AL FS M G PD TF S++ A + L
Sbjct: 403 AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHS 462
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+++ G S + LVD+ ++ G L++A + MP E ++ W ++++A
Sbjct: 463 YLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 160/350 (45%), Gaps = 33/350 (9%)
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
T N + L G L A +F+QMP +N+ S +L + G++ A+ L
Sbjct: 43 TYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPH 102
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM------PD----------------------- 233
+N +WT+M+ + R +A LF M PD
Sbjct: 103 RNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAI 162
Query: 234 ---YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
D +VFV ++ +CK G+L AR +F + KD V++NAM+ G ++ G+ +AL+
Sbjct: 163 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 222
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
LF+ M + + T S+ T + + L G Q H LV+R+ NV V N+++ YS
Sbjct: 223 LFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYS 282
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+C + D F ++ + VS+N IIAA+A + L F +M GFD + + +
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+LS G V+ + +V + G+ L+D+ S+ G L+ A
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLV-LLGLASEDLLGNALIDMYSKCGMLDAA 391
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 56/316 (17%)
Query: 25 STPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITW 84
S PD H+ L+ L S + NA I S+ G + AA+ F + K I+W
Sbjct: 349 SLPDVHIGKQIHAQLVLLGLASED--LLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 406
Query: 85 NAIITGYWQNGFLQESKNLFQSM------PVKNIVS------------------------ 114
A+ITGY QNG +E+ LF M P + S
Sbjct: 407 TALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIR 466
Query: 115 ---WNCMIAGCIDNDR------IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
+ + +G + D +D+A F MPERN+ ++NA+IS + +G + A ++
Sbjct: 467 SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKM 526
Query: 166 FEQMPR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS-----WTVMITGYV 216
FE M + +++ ++L G D+ M + +S + +I
Sbjct: 527 FEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 586
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV-GMLENARLLFERI---QPKDCVSF 272
+ F + +++ MP + + + T+++ C++ G E AR+ +++ +P D +
Sbjct: 587 RVGCFSQVQKMLVEMP-FKADPIIWTSILHS-CRIHGNQELARVAADKLFGMEPTDATPY 644
Query: 273 NAMIAGYAQNGVAEEA 288
+ YA+ G E+A
Sbjct: 645 VILSNIYARAGQWEDA 660
>gi|2583119|gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]
Length = 606
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/478 (37%), Positives = 265/478 (55%), Gaps = 33/478 (6%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA-----GCIDNDRIDDAFDYFQAMPERNT 143
TG W + FLQ NC+I GC+ R F MP+R++
Sbjct: 143 TGLWSDLFLQ-----------------NCLIGLYLKCGCLGLSR-----QMFDRMPKRDS 180
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYM 200
+YN+MI G++K G + A LF+ MP +N+IS+ +M+ G+ + + VD A L M
Sbjct: 181 VSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM 240
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
K+++SW MI GYVK+ R +A+ LF MP D V MI G+ K+G + +A+ L
Sbjct: 241 PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRD--VVTWATMIDGYAKLGFVHHAKTL 298
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQL 319
F+++ +D V++N+M+AGY QN EAL +FS M K + PDD TLV V A + L
Sbjct: 299 FDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR 358
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L++ H+ ++ F + A+I MYS+CG I + L F I + ++ WN +I
Sbjct: 359 LSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG 418
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
A HG E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P
Sbjct: 419 LAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEP 478
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HY C+VDILSR+G +E A + + MP E + +W + L AC + E GEL AK +
Sbjct: 479 RLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHL 538
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ GMW+DV RVR +MKE+ + K SWIE+ +VH F
Sbjct: 539 ILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFF 596
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 217/412 (52%), Gaps = 50/412 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + +RQ+FD+M +D +++N++I GY + G + ++ LF MP
Sbjct: 149 LFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPM 208
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+KN++SWN MI+G +D +D A F MPE++ ++N+MI G++KHGR+E+A LF
Sbjct: 209 EMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLF 268
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ MPRR+V+++ M+DG+ K G V A+ L D M ++VV++ M+ GYV+N+ EA E
Sbjct: 269 DVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALE 328
Query: 227 LF-------YRMPD--------------------YDKNVFVV-----------TAMITGF 248
+F + +PD D ++++V A+I +
Sbjct: 329 IFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMY 388
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G +++A L+FE I+ K +NAMI G A +G+ E A + + ++ ++PDD T V
Sbjct: 389 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFV 448
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SR G I ELA I
Sbjct: 449 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSI---ELAKNLIEE 505
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSA 414
PN V W T + A + H +E + + L G++P LS + A
Sbjct: 506 MPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 557
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ +D +NA+I ++ +AL L M++ + D +L V ACS L + G
Sbjct: 75 EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGM 134
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H + + G +++ + N +I +Y +CG + S F ++ + VS+N++I + + G
Sbjct: 135 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 194
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE-- 442
A F M + + I++ S++S G+A ++ D ++ K++ +P +
Sbjct: 195 LIVSARELFDLMPMEM--KNLISWNSMIS--GYA----QTSDGVDIASKLFADMPEKDLI 246
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ ++D + G++E A + MP D W +++
Sbjct: 247 SWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMI 283
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 306/552 (55%), Gaps = 24/552 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV N + ++ G + ARQ F+ + +D ++WNAII GY Q E+ N+F+ M +
Sbjct: 485 LFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMIL 544
Query: 110 KNI----VSWNCMIAGCIDNDRID--DAFDYFQAMPERNTATY--NAMISGFLKHGRLEE 161
I VS +++GC + ++ + F T Y +++I ++K G +E
Sbjct: 545 DGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEA 604
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGY 215
A +F MP R+V+S A++ G+ + D A+ + +N +++ ++
Sbjct: 605 ARYVFSCMPSRSVVSMNAIIAGYAQN---DLVEAIDLFQEMQNEGLNPSEITFASLLDAC 661
Query: 216 VKNERFCEARELF----YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ-PKDCV 270
+ R++ R YD + F+ +++ + +A +LF Q PK +
Sbjct: 662 TGPYKLNLGRQIHCLIQKRGLLYDGD-FLGVSLLVMYMNSQRKTDADILFSEFQYPKSTI 720
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+ A+I+G+ QNG +EEAL+L+ M + + +PD AT SV ACS L L +GR H L+
Sbjct: 721 LWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLI 780
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN-LVSWNTIIAAFAQHGHYEKA 389
G +++ +AV+ MY++CG + S F ++ S N ++SWN++I FA++G+ E A
Sbjct: 781 FHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENA 840
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F +M PD +TFL +L+AC HAG+V+E ++F++MV Y I+P +H C++D
Sbjct: 841 LKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMID 900
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L R G L++A + + FE + +W +LL AC I+ + G AA+K+ EL+P+NS+
Sbjct: 901 LLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSP 960
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
YV+LSN+YAA+G W +V VR M+E+G+ K SWI +G K + F+ GD HP +I
Sbjct: 961 YVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEI 1020
Query: 570 HLELKRASVQMK 581
H LK MK
Sbjct: 1021 HALLKDLIALMK 1032
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 210/452 (46%), Gaps = 81/452 (17%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
F + I S+ G + AR++FD + D ++W A+I GY Q G +E+ +F+ M
Sbjct: 218 FCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKL 277
Query: 109 --VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
V + V++ +I C+ R+DDA D F MP N +N MISG +K G EA F
Sbjct: 278 GLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFF 337
Query: 167 EQMPR---------------------------------------RNVISYTAMLDGFMKK 187
+ M + NV +++++ + K
Sbjct: 338 KNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKC 397
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD-------- 233
+++ A+ + D + +N+V W M+ GY +N + +LF M PD
Sbjct: 398 EKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSIL 457
Query: 234 -----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
++ N+FV ++ + K G LE AR FE I+ +D V
Sbjct: 458 SACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNV 517
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+NA+I GY Q +EA +F MI + PD+ +L S+ + C+ LQ L +G Q H +
Sbjct: 518 SWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFL 577
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+++G + + +++I MY +CG I + F + S ++VS N IIA +AQ+ E A+
Sbjct: 578 VKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVE-AI 636
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
F +M G +P ITF SLL AC K+N
Sbjct: 637 DLFQEMQNEGLNPSEITFASLLDACTGPYKLN 668
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 232/497 (46%), Gaps = 81/497 (16%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP--- 108
+ +A + ++ G + A + F+Q+ +D++ WN++++ Y + G L++ F S+
Sbjct: 118 LGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCG 177
Query: 109 -VKNIVSWNCMIAGCIDNDRID-----------------------------------DAF 132
N ++ +++ C ID DA
Sbjct: 178 VSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDAR 237
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI----SYTAMLDGFMKKG 188
F A+ + +T ++ AMI+G+++ G EEA ++FE M + ++ ++ ++ + G
Sbjct: 238 KIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLG 297
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----------------- 231
+D A L M NVV+W VMI+G+VK EA + F M
Sbjct: 298 RLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLS 357
Query: 232 --------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ NV+V +++I + K +E A+ +F+ + ++ V
Sbjct: 358 AIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVL 417
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+NAM+ GYAQNG A + ++LFS M PD+ T S+ +AC+ L+ L GRQ H +I
Sbjct: 418 WNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFII 477
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
++ FE N+ V N ++ MY++CG + ++ F I + + VSWN II + Q ++A
Sbjct: 478 KHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFN 537
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F +M L+G PD ++ S+LS C + + + + +VK G+ + L+D+
Sbjct: 538 MFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVK-SGLQTCLYAGSSLIDMY 596
Query: 452 SRAGQLEKAWQITQGMP 468
+ G +E A + MP
Sbjct: 597 VKCGAIEAARYVFSCMP 613
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 221/455 (48%), Gaps = 22/455 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V+V ++ I+ ++ K+ AA+++FD + ++++ WNA++ GY QNG+ + LF M
Sbjct: 384 VYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRG 443
Query: 108 --------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+I+S C C++ R +F + E N N ++ + K G L
Sbjct: 444 CGFWPDEFTYTSILS-ACACLECLEMGRQLHSF-IIKHNFEYNLFVENTLVDMYAKCGAL 501
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGY 215
EEA + FE + R+ +S+ A++ G++++ + D+A + M + VS +++G
Sbjct: 502 EEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGC 561
Query: 216 VKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ + ++ F ++ +++I + K G +E AR +F + + VS N
Sbjct: 562 ANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMN 621
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
A+IAGYAQN + EA+ LF M + P + T S+ AC+ LN GRQ H L+ +
Sbjct: 622 AIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKR 680
Query: 334 GFEANVSVCN-AVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFAQHGHYEKALI 391
G + +++ MY D+++ F + P + + W II+ Q+G E+AL
Sbjct: 681 GLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQ 740
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
+ +M N PD TF S+L AC + + + L+ V G+ + +VD+
Sbjct: 741 LYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHV-GLDSDELTGSAVVDMY 799
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
++ G ++ + Q+ + M + D W S++ N
Sbjct: 800 AKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKN 834
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 160/342 (46%), Gaps = 43/342 (12%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALSDYMSF 202
+A++ + K G +E A + F Q+ +R+++++ ++L + ++G +++ +L +
Sbjct: 120 SAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVS 179
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLL 260
N ++ ++++ + +++ + ++ N F ++I + K G L +AR +
Sbjct: 180 PNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKI 239
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ + D VS+ AMIAGY Q G+ EEAL++F M K+ + PD V+V TAC L L
Sbjct: 240 FDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRL 299
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
++ C+ F Q+ + N+V+WN +I+
Sbjct: 300 DDA------------------CD-----------------LFVQMPNTNVVAWNVMISGH 324
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
+ G +A+ FF M G T S+LSA +N + + +K G+ +
Sbjct: 325 VKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIK-QGLNSN 383
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ L+++ ++ ++E A ++ + E + +W ++L
Sbjct: 384 VYVGSSLINMYAKCEKMEAAKKVFDALD-ERNLVLWNAMLGG 424
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H ++ GF + + +A++ +Y++CG + + AF Q+ ++++WN++++ +++ G
Sbjct: 104 HAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSL 163
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
E+ + F + G P+ T+ +LS+C ++ + ++K+ G +S
Sbjct: 164 EQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKM-GFEFNSFCEGS 222
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
L+D+ S+ G L A +I + + DT W +++A V V L E A K ++
Sbjct: 223 LIDMYSKCGSLVDARKIFDAV-VDPDTVSWTAMIAGYV---QVGLPEEALKVFEDM 274
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 290/511 (56%), Gaps = 14/511 (2%)
Query: 85 NAIITGYWQ----NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE 140
NA+++ Y + L ++ +F + K+ SW M+ G + N D + + M +
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD 247
Query: 141 R-NTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARA 195
YNAMISG++ G +EA + +M + +Y +++ G + +
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 196 LSDYMSFKNVVSW---TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
+ Y+ + S+ +++ Y K +F EAR +F +MP K++ A+++G+ G
Sbjct: 308 VHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA--KDLVSWNALLSGYVSSG 365
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ A+L+F+ ++ K+ +S+ MI+G A+NG EE L+LFS M + +P D
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
+C+ L G+Q H +++ GF++++S NA+ITMY++CG + ++ FR + + VS
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS 485
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WN +IAA QHGH +A+ + +M G PD IT L++L+AC HAG V++ F+ M
Sbjct: 486 WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSME 545
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
VY I P ++HY L+D+L R+G+ A + + +PF+ +W +LL+ C ++ N+ELG
Sbjct: 546 TVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELG 605
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNK 552
+AA K+ L P++ Y++LSN++AA G W +V RVR LM+++GV K+ A SWIE+ +
Sbjct: 606 IIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Query: 553 VHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
VH FL D SHP + +++ L+ +M+ +
Sbjct: 666 VHTFLVDDTSHPEAEAVYIYLQDLGKEMRRL 696
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 190/400 (47%), Gaps = 41/400 (10%)
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
F PR ++++ ++D + K E++ AR L D +S + ++ T M++GY + AR
Sbjct: 43 FGFQPRAHILN--RLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLAR 100
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK----DCVSFNAMIAGYAQ 281
+F + P ++ + AMITGF +A LF +++ + D +F +++AG A
Sbjct: 101 GVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLAL 160
Query: 282 NGVAEE--------ALRLFSGMIKMDMQPDDATLVSVFTAC-SALQLLNEGRQSHVLVIR 332
E+ AL+ +G I LVSV++ C S+ LL+ R+ V
Sbjct: 161 VADDEKQCVQFHAAALKSGAGYI----TSVSNALVSVYSKCASSPSLLHSARK----VFD 212
Query: 333 NGFEANVSVCNAVITMYSRCGGI-LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
E + ++T Y + G L EL + LV++N +I+ + G Y++AL
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT-----C 446
+M +G + D T+ S++ AC AG L +L +V+ + E ++
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAG-------LLQLGKQVHAYVLRREDFSFHFDNS 325
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
LV + + G+ ++A I + MP + D W +LL+ V + ++ +L K+M+E +N
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKE---KN 381
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
++++ + A G + ++ MK +G + C Y++
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGF-EPCDYAF 420
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 18/227 (7%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N+ +S + GK AR +F++M KD+++WNA+++GY +G + E+K +F+ M KNI
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH----GRLEEATRLFEQ 168
+SW MI+G +N ++ F M + SG +K G + Q
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 169 MPR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+ + ++ + A++ + K G V++AR + M + VSW +I ++ EA
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 225 RELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+++ M PD + ++T G+++ R F+ ++
Sbjct: 503 VDVYEEMLKKGIRPDR----ITLLTVLTACSHAGLVDQGRKYFDSME 545
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
NA I+ ++ G + ARQ+F M D ++WNA+I Q+G E+ ++++ M K I
Sbjct: 455 GNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI 514
Query: 113 ----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEAT 163
++ ++ C +D YF +M Y +I + G+ +A
Sbjct: 515 RPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAE 574
Query: 164 RLFEQMPRRNVIS-YTAMLDGFMKKGEVD 191
+ E +P + + A+L G G ++
Sbjct: 575 SVIESLPFKPTAEIWEALLSGCRVHGNME 603
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 315/558 (56%), Gaps = 34/558 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQN--GF--------LQE 99
+ V A + ++ G+++ A+++ M + ++NAII GY ++ GF L +
Sbjct: 317 IIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLK 376
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+ F + + ++ I G ++ ++ +++ N NA++ + K L
Sbjct: 377 TGLGFDEITLSGALNACASIRGDLEGRQVHGL--AVKSISMSNICVANAILDMYGKCKAL 434
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK----------ARALSDYMSFKNVVSWT 209
EA+ LF+ M RR+ +S+ A++ + G ++ +R D ++ +V+
Sbjct: 435 AEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKAC 494
Query: 210 V----MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+ TG + R ++ F + FV A++ +CK GM+E A + +R +
Sbjct: 495 AGRQALNTGMEIHTRIIKSGMGF--------DSFVGAALVDMYCKCGMIEKADKIHDRTE 546
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
K VS+NA+I+G++ +E+A + FS M++M + PD+ T +V C+ L + G+Q
Sbjct: 547 QKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQ 606
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H +I+ +++V +C+ ++ MYS+CG + DS+L F + + + V+WN ++ +A HG
Sbjct: 607 IHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGL 666
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E+AL F M L P+ TF+S+L AC H G V++ + F++M+ YG+ P SEHY+
Sbjct: 667 GEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYS 726
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C+VDIL R+G++++A + Q MPFEAD +W +LL+ C I+ NVE+ E A + + +LDPQ
Sbjct: 727 CMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQ 786
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
+S+ V+LSN+YA AGMW +V+ +R +M+ + K+ SWIE+ ++VH FL GD HP
Sbjct: 787 DSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPR 846
Query: 566 IDKIHLELKRASVQMKSV 583
++I+ +L +M+SV
Sbjct: 847 DEEIYEKLGVLIGEMQSV 864
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 221/459 (48%), Gaps = 46/459 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
FV+N + + + A ++FD+M +DV+++N+II+GY G + ++ F MP
Sbjct: 84 TFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPE 143
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH-GRLEEATRLFEQ 168
+++VSWN +I+G + N + D F M A ++ LK G LEE +
Sbjct: 144 RDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQV 203
Query: 169 MP-------RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+V++ +A+L + K +D + ++ + KN VSW+ MI G V+N+R
Sbjct: 204 HGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRN 263
Query: 222 CEARELFYRMPD-------------------------------------YDKNVFVVTAM 244
E ELF M + ++ V TA
Sbjct: 264 VEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTAT 323
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
+ + K G + +A+ + + S+NA+I GYA++ +AL+ F ++K + D+
Sbjct: 324 LDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDE 383
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
TL AC++++ EGRQ H L +++ +N+ V NA++ MY +C + ++ F
Sbjct: 384 ITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDM 443
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ + VSWN IIAA Q+G+ E+ L F+ M + +PD T+ S+L AC +N
Sbjct: 444 MERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTG 503
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
M++ ++K G+ S LVD+ + G +EKA +I
Sbjct: 504 MEIHTRIIK-SGMGFDSFVGAALVDMYCKCGMIEKADKI 541
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 191/421 (45%), Gaps = 44/421 (10%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E T N ++ ++K L+ A ++F++M R+V+SY +++ G+ GE+D AR
Sbjct: 81 EPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYE 140
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMP--------------------------- 232
M ++VVSW +I+G+++N ++ ++F M
Sbjct: 141 MPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMG 200
Query: 233 ----------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+D +V +A++ + K L+++ +F + K+ VS++AMIAG QN
Sbjct: 201 VQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQN 260
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
E L LF M + + + S+F +C+AL L G++ H +++ F +++ V
Sbjct: 261 DRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVG 320
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
A + MY++CG + D++ + +L S+N II +A+ +AL F + G
Sbjct: 321 TATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLG 380
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
D IT L+AC E + L VK + + ++D+ + L +A
Sbjct: 381 FDEITLSGALNACASIRGDLEGRQVHGLAVKSIS-MSNICVANAILDMYGKCKALAEASD 439
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVE--LGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
+ M D W +++AAC N N E L A+ ++P + + S L A A
Sbjct: 440 LFDMME-RRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDD---FTYGSVLKACA 495
Query: 521 G 521
G
Sbjct: 496 G 496
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 38/269 (14%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA------------- 280
++ FV ++ + K L+ A +F+++ +D VS+N++I+GYA
Sbjct: 80 FEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFY 139
Query: 281 ------------------QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
QNG +++ +F M + + D A+L V AC AL+ +
Sbjct: 140 EMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDM 199
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G Q H LV++ GF+ +V +A++ MY++C + DS F ++ N VSW+ +IA Q
Sbjct: 200 GVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQ 259
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-VYG--IIP 439
+ + L F +M G + SL +C + +L +K +G II
Sbjct: 260 NDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIV 319
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMP 468
T +D+ ++ G++ A ++ MP
Sbjct: 320 G----TATLDMYAKCGRMADAQKVLSSMP 344
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 292 FSGMIKMDMQPDDA--TLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN--VSVC----- 342
FS + + QP T ++ CS LN G+Q+H +I GFE VS C
Sbjct: 35 FSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMY 94
Query: 343 ------------------------NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
N++I+ Y+ CG + + F ++ ++VSWN++I+
Sbjct: 95 IKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVIS 154
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
F Q+G K++ F +MG G D + +L ACG + + + + L+VK +G
Sbjct: 155 GFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVK-FGFD 213
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGEL 494
+ L+ + ++ +L+ + + +P E + W +++A CV N NVE EL
Sbjct: 214 CDVVTGSALLGMYAKCKRLDDSLSVFSELP-EKNWVSWSAMIAGCVQNDRNVEGLEL 269
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 204/658 (31%), Positives = 313/658 (47%), Gaps = 117/658 (17%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+R S V++ N+ ++ ++ G I A+ +F+ +T KDV++WN +I GY Q G + S
Sbjct: 36 LLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYS 95
Query: 101 --KNLFQSMPVKNIVSWNCMIAGC------------------------------IDNDRI 128
LFQ M +N + +G + + I
Sbjct: 96 FVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLI 155
Query: 129 D---------DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR------- 172
+ DA F +PERNT ++ +ISG+ EA LF M R
Sbjct: 156 NMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKF 215
Query: 173 ------------NVISY--------------------TAMLDGFMKKGEVDKARALSDYM 200
+++ Y A++ + K G +D A +
Sbjct: 216 IYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELS 275
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRM----------------------------- 231
K+ ++W+ MITGY + EA LFY M
Sbjct: 276 GDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGK 335
Query: 232 --------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
Y+ ++ +TA++ + K G L +AR F+ ++ D V + +MI+GYAQNG
Sbjct: 336 QIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNG 395
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
E AL L+ M + P + T+ SV ACS+L L +G+Q H I+ GF V + +
Sbjct: 396 ENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGS 455
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
A+ TMY++CG + D L FR++ S ++++WN +I+ +Q+G KAL F ++ P
Sbjct: 456 ALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKP 515
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
D +TF+++LSAC H G V F +M+ +GI+P EHY C+VDILSRAG+L + +
Sbjct: 516 DYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEF 575
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW 523
+ + +W LL AC N ELG A +K+ EL Q S+ Y++LS++Y A G
Sbjct: 576 IESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRS 635
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
DV RVR LMK +GV K+ SWIE+ ++VH F+ GD HP I KI EL+R MK
Sbjct: 636 DDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMK 693
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 235/523 (44%), Gaps = 57/523 (10%)
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDD 130
QL + V N+++ Y + G + ++K +F+S+ K++VSWNC+I G +
Sbjct: 35 QLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGY 94
Query: 131 AF--DYFQAMPERNTATYNAMISGFL--------KHGRLEEATRLFEQMPRRNVISYTAM 180
+F + FQ M NT SG G L+ + +V +++
Sbjct: 95 SFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSL 154
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--------- 231
++ + K G + AR + D + +N VSW +I+GY EA ELF M
Sbjct: 155 INMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDK 214
Query: 232 ------------PD---YDKNVF-------------VVTAMITGFCKVGMLENARLLFER 263
PD Y K + V A++T + K G L++A FE
Sbjct: 215 FIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFEL 274
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
KD ++++AMI GYAQ G + EAL LF M +P + T V V ACS + L EG
Sbjct: 275 SGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEG 334
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+Q H ++ G+E + A++ MY++CG ++D+ F + P++V W ++I+ +AQ+
Sbjct: 335 KQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQN 394
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G E AL + +M + P +T S+L AC + + + +K YG
Sbjct: 395 GENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIK-YGFSLEVPI 453
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
+ L + ++ G LE + + MP D W ++++ ++ N E G A + EL
Sbjct: 454 GSALSTMYAKCGSLEDGNLVFRRMP-SRDIMTWNAMISG--LSQNGE-GLKALELFEELR 509
Query: 504 PQNSAV-YVMLSNLYAAAGMWRDVTR----VRLLMKEQGVTKQ 541
+ YV N+ +A V R R+++ E G+ +
Sbjct: 510 HGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPR 552
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+ P + V + C+ + L +G+ H ++R G ++V + N+++ +Y++CG I+ ++
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGH--YEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
L F I + ++VSWN +I ++Q G Y + F +M P+G TF + +A
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125
Query: 418 AGKVNESMDLFELMVKV---YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
+ + + L +K Y + S L+++ + G + A ++ +P E +T
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDVFVGSS----LINMYCKIGCMLDARKVFDTIP-ERNTV 180
Query: 475 VWGSLLAACVIN-LNVELGELAAKKMRELDPQNSAVYV 511
W ++++ + + E EL RE + +Y
Sbjct: 181 SWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYT 218
>gi|302767812|ref|XP_002967326.1| hypothetical protein SELMODRAFT_30579 [Selaginella moellendorffii]
gi|300165317|gb|EFJ31925.1| hypothetical protein SELMODRAFT_30579 [Selaginella moellendorffii]
Length = 569
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/533 (31%), Positives = 281/533 (52%), Gaps = 64/533 (12%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA I ++ + A+++FD M ++V++W A++ Y Q+G L+E++ L MP NIV
Sbjct: 37 NAIIDGCAQGQDEALAKKVFDSMPQREVVSWTAMVATYSQSGRLEEARALLSKMPALNIV 96
Query: 114 SWNCMIAGCIDNDRIDDA---FDY----------------------------FQAMPERN 142
SWN MI DN ++DA FD F MP+R+
Sbjct: 97 SWNVMIQAFADNLLVEDAKERFDRAPEHDFVSWNAIITAYAQTSQIFLARAAFDRMPQRD 156
Query: 143 TATYNAMISGFLKHGR--LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
++ MI + + G+ +++A +F++ P+RNV+S+ M+ G+ G + +A+A+ D M
Sbjct: 157 VVSWATMIQSYAQEGQPSMDQAKEIFDRAPQRNVVSWNVMITGYSASGRIKQAKAVFDTM 216
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDY-------------------------- 234
K+V+SW ++ GY++N++ EA+ +F RMP
Sbjct: 217 PQKDVISWAALVAGYLQNQQLAEAKRVFDRMPATNAVCCNTVMASFAGADRMPETRSLFD 276
Query: 235 ---DKNVFVVTAMITGFCKVGMLENARLLFERIQPKD--CVSFNAMIAGYAQNGVAEEAL 289
++ + + M+ G+ + G +A+ F+R+ +D VS+NA+IAG+ NG+ E AL
Sbjct: 277 RMPERTLASWSTMLGGYAQSGHTASAKSFFDRMPQRDHDLVSWNALIAGHLDNGLDERAL 336
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
+LF M + PD A+ S AC+ L L R H + + G E + V NA++ Y
Sbjct: 337 QLFLEMDRRGCSPDPASYASALAACAGLASLGAARDIHWRLCKAGLETDAFVHNALVDFY 396
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
+ G + D+EL F+ + S ++V+WN + A F++ G Y + + G +PDGITFL
Sbjct: 397 GKSGRMADAELVFQSLASVDVVTWNALAAGFSRQGSYRLVVDLLWAIKDQGLEPDGITFL 456
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
+LL+A GHAG V+ F MV+ Y I EHY CLVD+L RA +LE+A MP
Sbjct: 457 ALLAAYGHAGLVDHGRRAFAAMVESYRIEAGIEHYHCLVDMLGRANRLEEALAEVAAMPH 516
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ W ++L+ CV N+++ +A + + +DP A YV+++N+Y +AGM
Sbjct: 517 RPSSVTWTTVLSTCVKWKNLDVASVAFESLLGIDPDGPAAYVLMANVYGSAGM 569
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 221/480 (46%), Gaps = 50/480 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D++ WNA+IT Y QNG LQ ++ +F MP +N VSWN +I GC A F +MP
Sbjct: 1 DLVAWNAMITAYAQNGNLQVAQAMFFRMPARNFVSWNAIIDGCAQGQDEALAKKVFDSMP 60
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+R ++ AM++ + + GRLEEA L +MP N++S+ M+ F V+ A+ D
Sbjct: 61 QREVVSWTAMVATYSQSGRLEEARALLSKMPALNIVSWNVMIQAFADNLLVEDAKERFDR 120
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------------------------ 235
+ VSW +IT Y + + AR F RMP D
Sbjct: 121 APEHDFVSWNAIITAYAQTSQIFLARAAFDRMPQRDVVSWATMIQSYAQEGQPSMDQAKE 180
Query: 236 -------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+NV MITG+ G ++ A+ +F+ + KD +S+ A++AGY QN EA
Sbjct: 181 IFDRAPQRNVVSWNVMITGYSASGRIKQAKAVFDTMPQKDVISWAALVAGYLQNQQLAEA 240
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
R+F M + V T ++ + ++ L R E ++ + ++
Sbjct: 241 KRVFDRMPATNA-------VCCNTVMASFAGADRMPETRSLFDRMP-ERTLASWSTMLGG 292
Query: 349 YSRCGGILDSELAFRQI--HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
Y++ G ++ F ++ +LVSWN +IA +G E+AL F +M G PD
Sbjct: 293 YAQSGHTASAKSFFDRMPQRDHDLVSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDPA 352
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
++ S L+AC + + D+ + K G+ + + LVD ++G++ A + Q
Sbjct: 353 SYASALAACAGLASLGAARDIHWRLCKA-GLETDAFVHNALVDFYGKSGRMADAELVFQS 411
Query: 467 MPFEADTGVWGSLLAA----CVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ D W +L A L V+L L A K + L+P + ++ L Y AG+
Sbjct: 412 LA-SVDVVTWNALAAGFSRQGSYRLVVDL--LWAIKDQGLEP-DGITFLALLAAYGHAGL 467
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
FV+NA + ++G+++ A +F + + DV+TWNA+ G+ + G + +L ++
Sbjct: 386 AFVHNALVDFYGKSGRMADAELVFQSLASVDVVTWNALAAGFSRQGSYRLVVDLLWAIKD 445
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
+ + +++ ++A +D F AM E Y+ ++ + RLE
Sbjct: 446 QGLEPDGITFLALLAAYGHAGLVDHGRRAFAAMVESYRIEAGIEHYHCLVDMLGRANRLE 505
Query: 161 EATRLFEQMPRR-NVISYTAMLDGFMKKGEVDKA 193
EA MP R + +++T +L +K +D A
Sbjct: 506 EALAEVAAMPHRPSSVTWTTVLSTCVKWKNLDVA 539
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 299/574 (52%), Gaps = 51/574 (8%)
Query: 59 ALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG-----------FLQESKNLFQSM 107
ALS + A ++FDQ+ ++ TWN +I + + L ES+ S
Sbjct: 73 ALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSY 132
Query: 108 P----VKNIVSWNCMIAG----------------CIDNDRI---------DDAFDYFQAM 138
+K + ++AG I N I D A+ F +
Sbjct: 133 TFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKI 192
Query: 139 PERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKAR 194
E++ ++N+MISGF++ G EEA +LF++M R N ++ +L K+ +++ R
Sbjct: 193 VEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGR 252
Query: 195 ALSDYMSFK----NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCK 250
DY+ N++ M+ YVK +AR LF +M + K++ T MI G+ K
Sbjct: 253 WACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEE--KDIVSWTTMIDGYAK 310
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVS 309
VG + AR +F+ + +D ++NA+I+ Y QNG +EAL +F + + + +P++ TL S
Sbjct: 311 VGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLAS 370
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
AC+ L ++ G HV + + G + N + ++I MYS+CG + + F + +
Sbjct: 371 TLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRD 430
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ W+ +IA A HGH A+ FS+M P+ +TF +LL AC H+G V+E F
Sbjct: 431 VFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFN 490
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
M VYG++P S+HY C+VDIL RAG LE+A ++ + MP VWG+LL AC I NV
Sbjct: 491 QMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNV 550
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
EL E+A ++ E D N YV+LSN+YA AG W V+R+R MK G+ K+ S IE+
Sbjct: 551 ELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEV 610
Query: 550 GNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+H FL GD SHP +I+ +L ++KS
Sbjct: 611 NGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKST 644
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 164/321 (51%), Gaps = 46/321 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F++N+ I S G + +A +F ++ KD+++WN++I+G+ Q G +E+ LF+ M +
Sbjct: 166 LFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKM 225
Query: 110 KNIVSWNCMIAGCID--NDRIDDAF-----DYFQAMP-ERNTATYNAMISGFLKHGRLEE 161
+N + G + RID F DY + + N NAM+ ++K G LE+
Sbjct: 226 ENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLED 285
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
A RLF++M ++++S+T M+DG+ K G+ D AR + D M +++ +W +I+ Y +N +
Sbjct: 286 ARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKP 345
Query: 222 CEARELFYRM-------PD-------------------------YDK------NVFVVTA 243
EA +F + P+ Y K N + T+
Sbjct: 346 KEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTS 405
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+I + K G LE A +F ++ +D ++AMIAG A +G A+ LFS M + ++P+
Sbjct: 406 LIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPN 465
Query: 304 DATLVSVFTACSALQLLNEGR 324
T ++ ACS L++EGR
Sbjct: 466 AVTFTNLLCACSHSGLVDEGR 486
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 131/281 (46%), Gaps = 19/281 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ ++NA + + G + AR+LFD+M KD+++W +I GY + G ++ +F MP
Sbjct: 267 LILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPR 326
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM-----PERNTATYNAMISGFLKHGRLEEA-- 162
++I +WN +I+ N + +A F+ + + N T + ++ + G ++
Sbjct: 327 EDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGW 386
Query: 163 --TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ +Q + N T+++D + K G ++KA + + ++V W+ MI G +
Sbjct: 387 IHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGH 446
Query: 221 FCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV-----SFN 273
A +LF +M + N T ++ G+++ RL F +++P V +
Sbjct: 447 GRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYA 506
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
M+ + G EEA+ L KM + P + ++ AC
Sbjct: 507 CMVDILGRAGCLEEAVELIE---KMPIVPSASVWGALLGAC 544
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/647 (29%), Positives = 320/647 (49%), Gaps = 93/647 (14%)
Query: 7 FHQTYLKRILFPPILRILSTPDSCGNFTP-----HSSNCLIRLFSTQYVFVNNAKISALS 61
++ L+ L P + S +CG +++ + +FV NA + +
Sbjct: 127 LYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYT 186
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNC 117
+ G + A +LFD M + + +++ A++ G Q G + ++ LF M + V+ +
Sbjct: 187 KCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSS 246
Query: 118 MIAGC----------------------------------IDNDRID---------DAFDY 134
++ C + N ID +A
Sbjct: 247 VLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKV 306
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEV 190
F ++P +T ++N +I+GF + G +A + M N ++Y+ ML +K +V
Sbjct: 307 FDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDV 366
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----------- 233
ARA+ D +S +V +W +++GY + E + ELF RM PD
Sbjct: 367 LSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSC 426
Query: 234 --------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
++FV + ++ + K G + AR++F R+ +D V +N
Sbjct: 427 SRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWN 486
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+MI+G A + + EEA F M M P +++ S+ +C+ L + +GRQ H ++++
Sbjct: 487 SMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKD 546
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G++ NV V +A+I MY++CG + D+ + F + + N+V+WN +I +AQ+G EKA+ F
Sbjct: 547 GYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLF 606
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
M PDG+TF+++L+ C H+G V+E++ F M YGI P +EHYTCL+D L R
Sbjct: 607 EYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGR 666
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
AG+L + + MP + D VW LLAAC ++ N ELGE AAK + LDP+N + YV+L
Sbjct: 667 AGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLL 726
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
SN+YA+ G D + VR LM +GV K YSWI+ + VH F+ D
Sbjct: 727 SNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHAFMVAD 773
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 164/333 (49%), Gaps = 45/333 (13%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T N ++ + G +A R F +PR N SY A L + G++D ARAL D M
Sbjct: 42 DTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMP 101
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PDY--------------------- 234
+NVVSW +I ++ER EA EL+ M P +
Sbjct: 102 DRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRR 161
Query: 235 ----------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
D+N+FV A++ + K G +E+A LF+ + + VSF AM+ G Q G
Sbjct: 162 CHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGS 221
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACS--------ALQLLNEGRQSHVLVIRNGFE 336
++ALRLF+ M + ++ D + SV +C+ ++ G+ H L++R GF
Sbjct: 222 VDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFG 281
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
++ V N++I MY++C + ++ F + + + VSWN +I F Q G Y KAL + M
Sbjct: 282 SDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLM 341
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+G +P+ +T+ ++L++C A V + +F+
Sbjct: 342 EESGSEPNEVTYSNMLASCIKARDVLSARAMFD 374
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/533 (22%), Positives = 217/533 (40%), Gaps = 128/533 (24%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ N + S +G A + F + + ++NA ++ + G L ++ L MP +
Sbjct: 44 FLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDR 103
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAM------P------------------------- 139
N+VSWN +IA ++R +A + ++ M P
Sbjct: 104 NVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCH 163
Query: 140 --------ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
+ N NA++ + K G +E+A RLF+ M N +S+TAM+ G ++ G VD
Sbjct: 164 GLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVD 223
Query: 192 KARALSDYMSFKNVVSWTVMITG------------------------------------- 214
A L M V V ++
Sbjct: 224 DALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSD 283
Query: 215 ----------YVKNERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENA----- 257
Y K + EA ++F +P N+ V+ +ITGF + G A
Sbjct: 284 QHVGNSLIDMYTKCMQMDEAVKVFDSLP----NISTVSWNILITGFGQAGSYAKALEVLN 339
Query: 258 ---------------RLLFERIQPKDCVS---------------FNAMIAGYAQNGVAEE 287
+L I+ +D +S +N +++GY Q + ++
Sbjct: 340 LMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQD 399
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
+ LF M ++QPD TL + ++CS L +L+ G Q H +R ++ V + ++
Sbjct: 400 TVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVD 459
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MYS+CG I + + F ++ ++V WN++I+ A H E+A FF QM NG P +
Sbjct: 460 MYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESS 519
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+ S++++C V + + +VK G + + L+D+ ++ G ++ A
Sbjct: 520 YASMINSCARLSSVPQGRQIHAQIVK-DGYDQNVYVGSALIDMYAKCGNMDDA 571
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 137/254 (53%), Gaps = 9/254 (3%)
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
C+A F +P N + A ++ + G L+ AR L + + ++ VS+N +IA A+
Sbjct: 60 CDALRAFRSLPR--PNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALAR 117
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
+ A EAL L+ GM++ + P TL SV +AC A+ L++GR+ H L ++ G + N+ V
Sbjct: 118 SERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFV 177
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
NA++ MY++CGG+ D+ F + SPN VS+ ++ Q G + AL F++M +G
Sbjct: 178 ENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGV 237
Query: 402 DPDGITFLSLLSACGHAGKVN-ESMDLFELMVKVYGII-----PSSEHY-TCLVDILSRA 454
D + S+L +C A + + F L ++ +I S +H L+D+ ++
Sbjct: 238 RVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKC 297
Query: 455 GQLEKAWQITQGMP 468
Q+++A ++ +P
Sbjct: 298 MQMDEAVKVFDSLP 311
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/575 (32%), Positives = 295/575 (51%), Gaps = 72/575 (12%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM- 107
+VFV N + A + G ++AAR++F +M KD +T+NA++ G + G ++ LF +M
Sbjct: 169 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228
Query: 108 --------------------------------------PVKNIVSWNCMIAGCIDNDRID 129
V N+ N ++ D +D
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFM 185
D F MPER+ +YN +I+ + + RLF +M + R V+ Y ML
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS--- 345
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
A +L D K + + V++ G + + A+I
Sbjct: 346 ------VAGSLPDVHIGKQIHAQLVLL-GLASED-------------------LLGNALI 379
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K GML+ A+ F K +S+ A+I GY QNG EEAL+LFS M + ++PD A
Sbjct: 380 DMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRA 439
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T S+ A S+L ++ GRQ H +IR+G++++V + ++ MY++CG + ++ F ++
Sbjct: 440 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 499
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
N +SWN +I+A+A +G + A+ F M GF+PD +TFLS+L+AC H G +E M
Sbjct: 500 PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 559
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
F LM Y I P EHY C++D L R G + ++ MPF+AD +W S+L +C I
Sbjct: 560 KYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRI 619
Query: 486 NLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYS 545
+ N EL +AA K+ ++P ++ YV+LSN+YA AG W D V+ +M+++GV K+ YS
Sbjct: 620 HGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYS 679
Query: 546 WIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
W+EI K++ F D++ P ID+I EL R +M
Sbjct: 680 WVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEM 714
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 218/473 (46%), Gaps = 50/473 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + +L +G + AR +FDQM K++ + N I++ Y +G L +++LF S P +N
Sbjct: 47 NLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNAT 106
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATY--------------------- 146
+W M+ R DA F+AM P+R T T
Sbjct: 107 TWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGL 166
Query: 147 -------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL--- 196
N ++ + KHG L A R+F +M ++ ++Y AM+ G K+G +A L
Sbjct: 167 DTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAA 226
Query: 197 -------SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
+ + +F ++++ + + + L R NVFV +++ +
Sbjct: 227 MRRAGIPATHFTFSSILTVAAGMAHLLLGH---QVHALVLRSTSV-LNVFVNNSLLDFYS 282
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K L++ R LF+ + +D VS+N +IA YA N A LRLF M K+ +
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ + +L ++ G+Q H ++ G + + NA+I MYS+CG + ++ F +
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS 402
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+SW +I + Q+G +E+AL FS M G PD TF S++ A + L
Sbjct: 403 AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHS 462
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+++ G S + LVD+ ++ G L++A + MP E ++ W ++++A
Sbjct: 463 YLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 160/350 (45%), Gaps = 33/350 (9%)
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
T N + L G L A +F+QMP +N+ S +L + G++ A+ L
Sbjct: 43 TYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPH 102
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM------PD----------------------- 233
+N +WT+M+ + R +A LF M PD
Sbjct: 103 RNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAI 162
Query: 234 ---YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
D +VFV ++ +CK G+L AR +F + KD V++NAM+ G ++ G+ +AL+
Sbjct: 163 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 222
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
LF+ M + + T S+ T + + L G Q H LV+R+ NV V N+++ YS
Sbjct: 223 LFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYS 282
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+C + D F ++ + VS+N IIAA+A + L F +M GFD + + +
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+LS G V+ + +V + G+ L+D+ S+ G L+ A
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLV-LLGLASEDLLGNALIDMYSKCGMLDAA 391
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 56/316 (17%)
Query: 25 STPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITW 84
S PD H+ L+ L S + NA I S+ G + AA+ F + K I+W
Sbjct: 349 SLPDVHIGKQIHAQLVLLGLASED--LLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 406
Query: 85 NAIITGYWQNGFLQESKNLFQSM------PVKNIVS------------------------ 114
A+ITGY QNG +E+ LF M P + S
Sbjct: 407 TALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIR 466
Query: 115 ---WNCMIAGCIDNDR------IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
+ + +G + D +D+A F MPERN+ ++NA+IS + +G + A ++
Sbjct: 467 SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKM 526
Query: 166 FEQMPR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS-----WTVMITGYV 216
FE M + +++ ++L G D+ M + +S + +I
Sbjct: 527 FEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 586
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV-GMLENARLLFERI---QPKDCVSF 272
+ F + +++ MP + + + T+++ C++ G E AR+ +++ +P D +
Sbjct: 587 RVGCFSQVQKMLVEMP-FKADPIIWTSILHS-CRIHGNQELARVAADKLFGMEPTDATPY 644
Query: 273 NAMIAGYAQNGVAEEA 288
+ YA+ G E+A
Sbjct: 645 VILSNIYARAGQWEDA 660
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/573 (32%), Positives = 309/573 (53%), Gaps = 27/573 (4%)
Query: 12 LKRILFPPILRILSTPDSCG-NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAAR 70
L +F +L++L + + F+ H+ C+ +L FV A I S G AR
Sbjct: 143 LNPFVFSTVLKLLVSAEWAKLGFSVHA--CVYKLGFDSDAFVGTALIDCYSVCGYAECAR 200
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDD 130
Q+FD + KD+++W ++ Y +N +ES LF M + N A + +
Sbjct: 201 QVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLE 260
Query: 131 AFDYFQAMP--ERNTATYNAMISG------FLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
F+ +A+ T+ + G ++K G +++A ++FE+MP+ +VI ++ M+
Sbjct: 261 VFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIA 320
Query: 183 GFMKKGEVDKA----------RALSDYMSFKNVV-SWTVMITGYVKNERFCEARELFYRM 231
+ + + ++A L + + +++ + ++ + N+ C ++
Sbjct: 321 RYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKV---- 376
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
D NVFV A++ + K G +EN+ LF VS+N +I GY Q G E+AL L
Sbjct: 377 -GLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALIL 435
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
F M++ +Q + T SV AC+ + L G Q H L ++ ++ N V NA+I MY++
Sbjct: 436 FKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAK 495
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG I D+ L F + + VSWN +I+ ++ HG Y +AL F M PD +TF+ +
Sbjct: 496 CGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGI 555
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
LSAC +AG ++ F+ MV+ Y I P +EHYTC+V +L R+G L+KA ++ +PFE
Sbjct: 556 LSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEP 615
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
VW +LL+ACVI+ +VELG ++A+++ E++P++ A +V+LSN+YA A W +V +R
Sbjct: 616 SVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRT 675
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
MK +G+ K+ SWIE +VHYF GD SHP
Sbjct: 676 SMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHP 708
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 206/441 (46%), Gaps = 17/441 (3%)
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATY---NA 148
Q FL + + S P N + ++ CI N D + + + + + N N
Sbjct: 27 QRSFLAQRTS--HSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNI 84
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----N 204
+++ ++K+ L +A +LF++MP RN +S+ ++ G+ + +A L + + N
Sbjct: 85 LLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELN 144
Query: 205 VVSWTVMITGYVKNE---RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
++ ++ V E Y++ +D + FV TA+I + G E AR +F
Sbjct: 145 PFVFSTVLKLLVSAEWAKLGFSVHACVYKL-GFDSDAFVGTALIDCYSVCGYAECARQVF 203
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ I+ KD VS+ M+A Y +N EE+L+LFS M + +P++ T SV AC L++ N
Sbjct: 204 DAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFN 263
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G+ H + + + V +I +Y + G + D+ F ++ +++ W+ +IA +A
Sbjct: 264 VGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYA 323
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
Q E+A+ F +M P+ T SLL AC + + +VKV G+ +
Sbjct: 324 QSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKV-GLDMNV 382
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
L+D+ ++ G++E + Q+ P D W +++ V N E + K M E
Sbjct: 383 FVSNALMDMYAKCGRMENSLQLFSESPNCTDVS-WNTVIVGYVQAGNGEKALILFKDMLE 441
Query: 502 LDPQNSAVYVMLSNLYAAAGM 522
Q + V S L A AG+
Sbjct: 442 CQVQGTEV-TYSSVLRACAGI 461
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 268/475 (56%), Gaps = 38/475 (8%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N ++ + K G L +A ++F++M R++ S+ M+ G++K G +KAR L D M ++
Sbjct: 157 NRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNF 216
Query: 207 SWTVMITGYVKNERFCEARELFYRMP--DY------------------------------ 234
SWT +I+G V++ R EA EL+ M DY
Sbjct: 217 SWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGH 276
Query: 235 ------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
D + V +++ + K G +E AR +F++++ +D VS+ MI Y +NG EE
Sbjct: 277 IMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEG 336
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
LF ++ ++ P+D T V AC+ L + G+Q H ++R GF++ S +A++ M
Sbjct: 337 FALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHM 396
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
YS+CG I +++ F + P+L SW +++ +AQHG ++KAL FF + +G PDGI F
Sbjct: 397 YSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAF 456
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+ +LSAC HAG V++ ++ F + + +G+ + +HY C++D+L+RAGQ +A I MP
Sbjct: 457 IGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMP 516
Query: 469 FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTR 528
+ D +W +LL C I+ N+EL + AAK + E++P+N A YV L+N+YA+AGM +
Sbjct: 517 IKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEAN 576
Query: 529 VRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+R M +G+ K+ SWIEI +VH F GD SHP +I L S +MK V
Sbjct: 577 IRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEV 631
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 207/431 (48%), Gaps = 51/431 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++++N + ++ G + A ++FD+M +D+ +WN +I+GY + G ++++NLF MP
Sbjct: 153 LYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPN 212
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATR 164
++ SW +I+GC+ ++R ++A + ++ M + N T ++ ++ L +
Sbjct: 213 RDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKK 272
Query: 165 LFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ + R + + + ++LD + K G +++AR + D M ++VVSWT MI Y+KN R
Sbjct: 273 IHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGR 332
Query: 221 FCEARELFYR------MPD-------------------------------YDKNVFVVTA 243
E LF MP+ +D +A
Sbjct: 333 REEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASA 392
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
++ + K G +ENA+ +FE + D S+ +++ GYAQ+G ++AL F ++K +PD
Sbjct: 393 LVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPD 452
Query: 304 DATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
+ V +AC+ L+++G + H + ++G + +I + +R G ++E
Sbjct: 453 GIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESII 512
Query: 363 RQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG-ITFLSLLSACGHAGK 420
++ P+ W ++ HG+ E L + L +P+ T+++L + AG
Sbjct: 513 NEMPIKPDKYIWAALLGGCRIHGNLE--LAKRAAKSLFEIEPENPATYVTLANIYASAGM 570
Query: 421 VNESMDLFELM 431
E ++ E M
Sbjct: 571 RAEEANIRETM 581
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+P + +++ C + L EG+Q H + +G + + N ++ MY++CG ++D+E
Sbjct: 116 KPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEK 174
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++ +L SWN +I+ + + G++EKA F +M + D ++ +++S C +
Sbjct: 175 VFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMP----NRDNFSWTAIISGCVQHNR 230
Query: 421 VNESMDLFELMVK 433
E+++L+ LM K
Sbjct: 231 PEEALELYRLMQK 243
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R+ + +A + S+ G I A+ +F+ + D+ +W +++ GY Q+G ++
Sbjct: 378 MVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKA 437
Query: 101 KNLFQ----SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMIS 151
+ F+ S + +++ +++ C +D +YF ++ E++ T Y +I
Sbjct: 438 LHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIID 497
Query: 152 GFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKAR 194
+ G+ EA + +MP + + + A+L G G ++ A+
Sbjct: 498 LLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAK 541
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 310/612 (50%), Gaps = 52/612 (8%)
Query: 19 PILRILSTPDSCGNFTP-HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT 77
P L++LS S F H+ L +T + + SA+SR+G IS A LF+ +
Sbjct: 31 PSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIE 90
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFD 133
++ WN++I G + + F M N ++ ++ C ++ A +
Sbjct: 91 EPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCA---KLASAHE 147
Query: 134 YFQAMPE-------RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
Q + + ++I+ + + G + A +F+Q R+ IS+TA++ G+
Sbjct: 148 GKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYAL 207
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD----------- 235
G +D+AR L D M K+VVSW MI GY + R EA LF M +
Sbjct: 208 WGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSV 267
Query: 236 --------------------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
N+ +V A+I + K G L+ AR LF+ + +D
Sbjct: 268 LSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDV 327
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+S+N MI GY +EAL LF M+ ++P + T +S+ +C+ L ++ G+ H
Sbjct: 328 ISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAY 387
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ +N + S+ ++I +Y++CG I+ + F + +L SWN +I A HG +KA
Sbjct: 388 INKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKA 447
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
FS+M +G +P+ ITF+ +LSAC HAG V+ F MV+ Y I P S+HY C++D
Sbjct: 448 FELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMID 507
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L RAG E+A + Q M + D +WGSLL AC + VELGEL A+++ EL+P N
Sbjct: 508 LLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGA 567
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
YV+LSN+YA AG W DV R+R + ++G+ K + IE+ N VH FL GD HP + I
Sbjct: 568 YVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDI 627
Query: 570 HLELKRASVQMK 581
+ L+ Q+K
Sbjct: 628 YRMLEEVDEQLK 639
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 314/594 (52%), Gaps = 20/594 (3%)
Query: 17 FPPILRILS-TPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FP +L+ + D H+ +IR V V NA I+ + G IS AR LFD+
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAH--VIRFGFESDVDVGNALITMYVKCGDISNARMLFDK 258
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNCMIAGC--IDNDRID 129
M +D I+WNA+I+GY++NG E LF M ++++ + + C +DN+R+
Sbjct: 259 MPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLG 318
Query: 130 DAFDYFQAMPE--RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ E + + N++I + GRLEEA +F +M ++V+S+TAM+ +
Sbjct: 319 RGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSH 378
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------KNVFVV 241
KA M + ++ + + + +L R+ + +V V
Sbjct: 379 KLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVS 438
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
++I + K ++NA +F I K+ VS+ ++I G N + EAL F M K M+
Sbjct: 439 NSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMK 497
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P+ TL+SV +AC+ + L G++ H +R G + + NA++ MY RCG + +
Sbjct: 498 PNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQ 557
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F ++ +WN ++ +AQ G + A+ F +M PD ITF+SLL AC +G V
Sbjct: 558 FNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMV 616
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
E ++ F +M Y + P+ +HY C+VDIL RAGQL+ A+ Q MP D +WG+LL
Sbjct: 617 TEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLN 676
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC I+ NVELGE+AAK++ E D ++ Y++L NLYA G W V++VR LM+E+G++
Sbjct: 677 ACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSAD 736
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSWSS 595
SW+EI KVH FL GD SH +I+ L +MK + F + +S++S
Sbjct: 737 PGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKE-NGFGNLKSSFTS 789
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 227/472 (48%), Gaps = 26/472 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V + NA +S R G + A +F +M+ +DV +WN ++ GY + G E+ NL+ M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEE 161
N+ ++ ++ C I + + E + NA+I+ ++K G +
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITG--Y 215
A LF++MP+R+ IS+ AM+ G+ + G + L M +V ++ T + +
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ NER + ++ ++ + ++I + +G LE A +F R++ KD VS+ AM
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IA + + +A+ + M + PD+ TLVSV +AC+ + L+ G + H + I+ G
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++V V N++I MYS+C + ++ FR I N+VSW ++I + +AL+FF Q
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDL----FELMVKVYGIIPSSEHYTCLVDIL 451
M P+ +T +S+LSAC G + ++ V G +P++ ++D+
Sbjct: 492 MK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNA-----ILDMY 545
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
R G+ K + Q + D W LL +L KM EL+
Sbjct: 546 VRCGR--KVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 155/308 (50%), Gaps = 32/308 (10%)
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVT-------------AMITGFCKVGMLENARLLF 261
Y+ R CE R R PD V+ + A+++ F + G L +A +F
Sbjct: 100 YIALLRLCEWR----RAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVF 155
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
++ +D S+N ++ GYA+ G +EAL L+ M+ +++P+ T SV C+ + +
Sbjct: 156 GKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIA 215
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G++ H VIR GFE++V V NA+ITMY +CG I ++ + F ++ + +SWN +I+ +
Sbjct: 216 RGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYF 275
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
++G + L FS M DPD IT ++ SAC E +D L V+G + S
Sbjct: 276 ENGGGLEGLELFSMMRELSVDPDLITMTTVASAC-------ELLDNERLGRGVHGYVVKS 328
Query: 442 EH------YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
E L+ + S G+LE+A + M D W +++A+ +++ + +
Sbjct: 329 EFGGDISMNNSLIQMYSSLGRLEEAETVFSRME-SKDVVSWTAMIAS-LVSHKLPFKAVE 386
Query: 496 AKKMRELD 503
KM EL+
Sbjct: 387 TYKMMELE 394
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G E+A++ M+++ ++ ++ +++ C + +EG + + LV + V +
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
NA+++M+ R G +LD+ F ++ ++ SWN ++ +A+ G +++AL + +M
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P+ TF S+L C + ++ +++ +G + L+ + + G + A
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIR-FGFESDVDVGNALITMYVKCGDISNARM 254
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL--DP 504
+ MP + D W ++++ N G MREL DP
Sbjct: 255 LFDKMP-KRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDP 297
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 314/594 (52%), Gaps = 20/594 (3%)
Query: 17 FPPILRILS-TPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FP +L+ + D H+ +IR V V NA I+ + G IS AR LFD+
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAH--VIRFGFESDVDVGNALITMYVKCGDISNARMLFDK 258
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNCMIAGC--IDNDRID 129
M +D I+WNA+I+GY++NG E LF M ++++ + + C +DN+R+
Sbjct: 259 MPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLG 318
Query: 130 DAFDYFQAMPE--RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ E + + N++I + GRLEEA +F +M ++V+S+TAM+ +
Sbjct: 319 RGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSH 378
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------KNVFVV 241
KA M + ++ + + + +L R+ + +V V
Sbjct: 379 KLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVS 438
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
++I + K ++NA +F I K+ VS+ ++I G N + EAL F M K M+
Sbjct: 439 NSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMK 497
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P+ TL+SV +AC+ + L G++ H +R G + + NA++ MY RCG + +
Sbjct: 498 PNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQ 557
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F ++ +WN ++ +AQ G + A+ F +M PD ITF+SLL AC +G V
Sbjct: 558 FNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMV 616
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
E ++ F +M Y + P+ +HY C+VDIL RAGQL+ A+ Q MP D +WG+LL
Sbjct: 617 TEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLN 676
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC I+ NVELGE+AAK++ E D ++ Y++L NLYA G W V++VR LM+E+G++
Sbjct: 677 ACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSAD 736
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSWSS 595
SW+EI KVH FL GD SH +I+ L +MK + F + +S++S
Sbjct: 737 PGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKE-NGFGNLKSSFTS 789
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 227/472 (48%), Gaps = 26/472 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V + NA +S R G + A +F +M+ +DV +WN ++ GY + G E+ NL+ M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEE 161
N+ ++ ++ C I + + E + NA+I+ ++K G +
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITG--Y 215
A LF++MP+R+ IS+ AM+ G+ + G + L M +V ++ T + +
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ NER + ++ ++ + ++I + +G LE A +F R++ KD VS+ AM
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IA + + +A+ + M + PD+ TLVSV +AC+ + L+ G + H + I+ G
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++V V N++I MYS+C + ++ FR I N+VSW ++I + +AL+FF Q
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDL----FELMVKVYGIIPSSEHYTCLVDIL 451
M P+ +T +S+LSAC G + ++ V G +P++ ++D+
Sbjct: 492 MK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNA-----ILDMY 545
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
R G+ K + Q + D W LL +L KM EL+
Sbjct: 546 VRCGR--KVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 155/308 (50%), Gaps = 32/308 (10%)
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVT-------------AMITGFCKVGMLENARLLF 261
Y+ R CE R R PD V+ + A+++ F + G L +A +F
Sbjct: 100 YIALLRLCEWR----RAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVF 155
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
++ +D S+N ++ GYA+ G +EAL L+ M+ +++P+ T SV C+ + +
Sbjct: 156 GKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIA 215
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G++ H VIR GFE++V V NA+ITMY +CG I ++ + F ++ + +SWN +I+ +
Sbjct: 216 RGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYF 275
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
++G + L FS M DPD IT ++ SAC E +D L V+G + S
Sbjct: 276 ENGGGLEGLELFSMMRELSVDPDLITMTTVASAC-------ELLDNERLGRGVHGYVVKS 328
Query: 442 EH------YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
E L+ + S G+LE+A + M D W +++A+ +++ + +
Sbjct: 329 EFGGDISMNNSLIQMYSSLGRLEEAETVFSRME-SKDVVSWTAMIAS-LVSHKLPFKAVE 386
Query: 496 AKKMRELD 503
KM EL+
Sbjct: 387 TYKMMELE 394
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G E+A++ M+++ ++ ++ +++ C + +EG + + LV + V +
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
NA+++M+ R G +LD+ F ++ ++ SWN ++ +A+ G +++AL + +M
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P+ TF S+L C + ++ +++ +G + L+ + + G + A
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIR-FGFESDVDVGNALITMYVKCGDISNARM 254
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL--DP 504
+ MP + D W ++++ N G MREL DP
Sbjct: 255 LFDKMP-KRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDP 297
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/550 (34%), Positives = 280/550 (50%), Gaps = 72/550 (13%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
I+A A + AR++FDQM +DV WN +I GY G +E+ L+ +M + N
Sbjct: 69 ITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDN 128
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG------FLKHGRLEEATRLFEQMP 170
Y R+ A +A+ G +KHG F+
Sbjct: 129 -----------------YTFPFVVRSCAVLSALREGKEVHCNIVKHG--------FDS-- 161
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
+V ++++ + + GE + M +N+VSWT +I GYV+N F E +F
Sbjct: 162 --DVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFRE 219
Query: 231 M------PD-------------------------------YDKNVFVVTAMITGFCKVGM 253
M P+ D +V + A+I + K G
Sbjct: 220 MVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGN 279
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+E AR LF+ + ++ VS+NAMIA Y QN A++LF M + D T+VSV +A
Sbjct: 280 VETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISA 339
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C++L LN GR H LV R G E NVS+ NA+I MY++CG I + F ++ ++VSW
Sbjct: 340 CASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSW 399
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
++I A A HGH E AL FS+M G P+ TF ++ +AC H+G V E FE M++
Sbjct: 400 TSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMR 459
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
Y I+P EH C+VD+L RAG L +A++ MP E D VWG+LL +C I+ N+EL E
Sbjct: 460 DYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAE 519
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
L A+K+ LDPQ YV++SN+YA AG W D R+R LM+E+ + K +S +E+ +
Sbjct: 520 LVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRF 579
Query: 554 HYFLGGDMSH 563
H FL G S
Sbjct: 580 HTFLSGSRSQ 589
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 199/404 (49%), Gaps = 29/404 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
VFV ++ ++ S++G+ +F +M +++++W A+I GY QN + +E +F+ M
Sbjct: 163 VFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVG 222
Query: 108 --PVKNIVSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
N V+ ++ C ++ ++ + + + + + NA+I+ + K G +E
Sbjct: 223 SGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYG-IKLGVDPDVSLTNALIALYGKCGNVE 281
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDYMSFKNVVSWTV 210
A LF+ M +N++S+ AM+ + + A L DY++ +V+S
Sbjct: 282 TARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACA 341
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ G + R+ EL R + NV + A+I + K G ++ AR +FER+ + V
Sbjct: 342 SL-GALNTGRW--MHELVKR-KGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVV 397
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+ +MI A +G E+AL+LFS M ++P+ T +VFTAC L+ EGR+ +
Sbjct: 398 SWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESM 457
Query: 331 IRN-GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
+R+ V C ++ + R G ++++ E + P++ W ++ + H + E
Sbjct: 458 MRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLEL 517
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSAC-GHAGKVNESMDLFELM 431
A + ++ L DP +TF L+S AG+ ++ L +LM
Sbjct: 518 AELVAEKLFL--LDPQTVTFYVLMSNIYAEAGRWEDAARLRKLM 559
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 278/496 (56%), Gaps = 34/496 (6%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM- 138
+++ N +I Y + G L+ ++ +F K++V+W MI G +D ++A + F+ M
Sbjct: 291 ELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELML 350
Query: 139 ---PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
E N T A++S G LE R+ E++ +N
Sbjct: 351 LSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKN---------------------- 388
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
+ +S N ++ YVK + +ARELF RM K+V+ T+M+ G+ K G LE
Sbjct: 389 MRCSLSLHNA-----LLDMYVKCDCLVDARELFDRMAT--KDVYSWTSMVNGYAKCGDLE 441
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+AR F++ K+ V ++AMIAGY+QN +E+L+LF M++ + P + TLVSV +AC
Sbjct: 442 SARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACG 501
Query: 316 ALQLLNEGRQSH-VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
L LN G H V+ +V++ NA++ MY++CG I + F + NL+SWN
Sbjct: 502 QLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWN 561
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+IA +A +G ++A+ F QM GF+P+ ITF+SLL+AC H G ++E + F+ M +
Sbjct: 562 TMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERK 621
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
YGI P HY C+VD+L R G LE+A+++ MP + WG+LL AC ++ NVEL L
Sbjct: 622 YGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARL 681
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
+A + LDP++S +YV+L+N A W DV RVR LMK++GV K YS IEI
Sbjct: 682 SAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFV 741
Query: 555 YFLGGDMSHPCIDKIH 570
FL D SHP ++I+
Sbjct: 742 EFLVADESHPQSEEIY 757
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 210/434 (48%), Gaps = 57/434 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V N I + G + ARQ+FD+ + KDV+TW +I GY + +E+ +F+ M +
Sbjct: 292 LLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLL 351
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEE 161
++ V+ +++ C D ++ + + E+N + +NA++ ++K L +
Sbjct: 352 SHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVD 411
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
A LF++M ++V S+T+M++G+ K G+++ AR D KN V W+ MI GY +N +
Sbjct: 412 ARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKP 471
Query: 222 CEARELFYRM---------------------------PDYDKNVFVV-----------TA 243
E+ +LF+ M D+ FVV A
Sbjct: 472 KESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENA 531
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
++ + K G ++ A +F + ++ +S+N MIAGYA NG A++A+ +F M M +P+
Sbjct: 532 IVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPN 591
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAF 362
+ T VS+ TACS L++EGR+ + R G + ++ + R G + E A+
Sbjct: 592 NITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLL---EEAY 648
Query: 363 RQIHS----PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP-DGITFLSLLSACGH 417
+ I + P +W ++ A HG+ E A + S L DP D ++ L + C +
Sbjct: 649 KLIANMPMQPCEAAWGALLNACRMHGNVELARL--SAHNLLRLDPEDSGIYVLLANTCAN 706
Query: 418 AGKVNESMDLFELM 431
K ++ + LM
Sbjct: 707 DRKWSDVRRVRSLM 720
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 191/412 (46%), Gaps = 58/412 (14%)
Query: 46 STQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQ 105
S V + N + + + +Q+ +MT +IT
Sbjct: 150 SPTNVIITNPTLLIMESCSTMRQLKQIQARMTLTGIIT---------------------H 188
Query: 106 SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
+ PV ++++ C +A D + A F + + NT +N MI G+
Sbjct: 189 AFPVSRVIAF-CALAHSGD---LHYAHTIFNRVEQPNTFMWNTMIRGY------------ 232
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
Q R+ + +++ + F + E+D + S + K + + G +C
Sbjct: 233 --QNARKPIFAFSFFVYMFQLRVEMD---SRSFVFALKACQQFETVFEG---ESVYC--- 281
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ ++M +D + V +I + + G+L+NAR +F+ KD V++ MI GYA + +
Sbjct: 282 -VVWKM-GFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCS 339
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EEA+ +F M+ ++P++ TL++V +ACS + L G++ H V ++S+ NA+
Sbjct: 340 EEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNAL 399
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY +C ++D+ F ++ + ++ SW +++ +A+ G E A FF Q +
Sbjct: 400 LDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTP----RKNA 455
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
+ + ++++ K ES+ LF M++ G++P EH LV +LS GQL
Sbjct: 456 VCWSAMIAGYSQNNKPKESLKLFHEMME-RGVVP-IEH--TLVSVLSACGQL 503
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 122/284 (42%), Gaps = 48/284 (16%)
Query: 46 STQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQ 105
+T+ V+ + ++ ++ G + +AR+ FDQ K+ + W+A+I GY QN +ES LF
Sbjct: 420 ATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFH 479
Query: 106 SMPVKNIVSWN---------CMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLK 155
M + +V C C++ D I F + +P T NA++ + K
Sbjct: 480 EMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLE-NAIVDMYAK 538
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
G ++ AT +F MP RN+IS+ M+ G+ G +A + D M
Sbjct: 539 CGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQM--------------- 583
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS---- 271
R ++ N +++T G++ R F+ ++ K +
Sbjct: 584 --------------RNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERG 629
Query: 272 -FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ M+ + G+ EEA +L + M MQP +A ++ AC
Sbjct: 630 HYACMVDLLGRTGLLEEAYKLIAN---MPMQPCEAAWGALLNAC 670
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/505 (36%), Positives = 286/505 (56%), Gaps = 18/505 (3%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N+++ Y + G +K +F M V++I SWN MIA + ++D A F+ M ER+
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
T+N+MISGF + G A +F +M R +++S D F + L K
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP----DRFTLASVLSACANLEKLCIGKQ 300
Query: 205 VVSWTVM----ITGYVKNERFC---------EARELFYRMPDYDKNVFVVTAMITGFCKV 251
+ S V I+G V N AR L + D + TA++ G+ K+
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G + A+ +F ++ +D V++ AMI GY Q+G EA+ LF M+ +P+ TL ++
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNL 370
+ S+L L+ G+Q H +++G +VSV NA+ITMY++ G I + AF I +
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
VSW ++I A AQHGH E+AL F M + G PD IT++ + SAC HAG VN+ F++
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M V IIP+ HY C+VD+ RAG L++A + + MP E D WGSLL+AC ++ N++
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
LG++AA+++ L+P+NS Y L+NLY+A G W + ++R MK+ V K+ +SWIE+
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Query: 551 NKVHYFLGGDMSHPCIDKIHLELKR 575
+KVH F D +HP ++I++ +K+
Sbjct: 661 HKVHVFGVEDGTHPEKNEIYMTMKK 685
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 235/511 (45%), Gaps = 123/511 (24%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L V V+N+ ++ ++ G A+ +FD+M +D+ +WNA+I + Q G + +
Sbjct: 172 IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLA 231
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDD--AFDYFQAM-------PERNT-------- 143
F+ M ++IV+WN MI+G N R D A D F M P+R T
Sbjct: 232 MAQFEQMAERDIVTWNSMISGF--NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
Query: 144 -------------------------ATYNAMISGFLKHGRLEEATRLFEQMPRRN--VIS 176
NA+IS + + G +E A RL EQ ++ +
Sbjct: 290 ANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEG 349
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+TA+LDG++K G++++A+ + + ++VV+WT MI GY ++ + EA LF M +
Sbjct: 350 FTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ 409
Query: 237 -------------------------------------NVFVVTAMITGFCKVGMLENARL 259
+V V A+IT + K G + +A
Sbjct: 410 RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASR 469
Query: 260 LFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
F+ I+ +D VS+ +MI AQ+G AEEAL LF M+ ++PD T V VF+AC+
Sbjct: 470 AFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L+N+GRQ F+ V + P L + ++
Sbjct: 530 LVNQGRQY--------FDMMKDVDKII----------------------PTLSHYACMVD 559
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
F + G ++A F +M + +PD +T+ SLLSAC +V++++DL ++ + ++
Sbjct: 560 LFGRAGLLQEAQEFIEKMPI---EPDVVTWGSLLSAC----RVHKNIDLGKVAAERLLLL 612
Query: 439 --PSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+S Y+ L ++ S G+ E+A +I + M
Sbjct: 613 EPENSGAYSALANLYSACGKWEEAAKIRKSM 643
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 202/440 (45%), Gaps = 45/440 (10%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N ++ Y + G+ ++ LF MP++ SWN +++ +D ++F +P+R++
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYM 200
++ MI G+ G+ +A R+ M + + + T +L ++ + + ++
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 201 S----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
NV ++ Y K A+ +F RM D + + AMI +VG ++
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW--NAMIALHMQVGQMDL 230
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACS 315
A FE++ +D V++N+MI+G+ Q G AL +FS M++ + PD TL SV +AC+
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI-------------------- 355
L+ L G+Q H ++ GF+ + V NA+I+MYSRCGG+
Sbjct: 291 NLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350
Query: 356 ---LDSELA----------FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
LD + F + ++V+W +I + QHG Y +A+ F M G
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P+ T ++LS ++ + VK G I S L+ + ++AG + A +
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVK-SGEIYSVSVSNALITMYAKAGNITSASR 469
Query: 463 ITQGMPFEADTGVWGSLLAA 482
+ E DT W S++ A
Sbjct: 470 AFDLIRCERDTVSWTSMIIA 489
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 300/563 (53%), Gaps = 65/563 (11%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
I L + ++ A Q+ Q+ ++ +I ++ LQ+ K + Q + + V
Sbjct: 46 IHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGL 105
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
++ N ++ + K L ++ +LF++MP R++ S
Sbjct: 106 FIL---------------------------NRLLEMYAKCDSLMDSQKLFDEMPERDLCS 138
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+ ++ G+ K G + +A++L D M ++ SWT MI+GYV+++R EA ELF M D
Sbjct: 139 WNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDN 198
Query: 237 ---NVFVVTA---------------------MITG--------------FCKVGMLENAR 258
N F V++ M TG + K G +E AR
Sbjct: 199 SKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEAR 258
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F+++ +D V++ AMI Y Q+G +E LF+ +++ ++P++ T V AC+
Sbjct: 259 HIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQT 318
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
G++ H + R GF+ +A++ MYS+CG ++ +E F++ P+L SW ++IA
Sbjct: 319 SEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIA 378
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+AQ+G ++A+ +F + +G PD ITF+ +LSAC HAG V++ +D F + + YG+
Sbjct: 379 GYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLT 438
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
+++HY C++D+L+R+GQ ++A I M + D +W SLL C I+ N++L + AA+
Sbjct: 439 HTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEA 498
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ E++P+N A YV L+N+YA AGMW +V ++R M ++GV K+ SWI I VH FL
Sbjct: 499 LFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLV 558
Query: 559 GDMSHPCIDKIHLELKRASVQMK 581
GD SHP +I+ L + S +MK
Sbjct: 559 GDDSHPKSKEINEFLGKLSKRMK 581
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 216/472 (45%), Gaps = 84/472 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N + ++ + +++LFD+M +D+ +WN +I+GY + G LQE+K+LF MP
Sbjct: 105 LFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPE 164
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM-ISGFLKHGRLEEATRLFEQ 168
++ SW MI+G + +DR ++A + F+ M + + N +S L R+ ++
Sbjct: 165 RDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKE 224
Query: 169 MP--------RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ + + ++A+ D + K G +++AR + D M +++V+WT MI Y ++ R
Sbjct: 225 IHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGR 284
Query: 221 FCEARELFYRM------PD-------------------------------YDKNVFVVTA 243
E +LF + P+ +D F +A
Sbjct: 285 RKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASA 344
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
++ + K G + +A +F+ D S+ ++IAGYAQNG +EA+R F ++K QPD
Sbjct: 345 LVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPD 404
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
T V V +AC+ L+++G + +++ Y G+
Sbjct: 405 HITFVGVLSACAHAGLVDKG---------------LDYFHSIKEQY----GL-------- 437
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
H+ + + II A+ G +++A S+M + PD + SLL C G +
Sbjct: 438 -THTAD--HYACIIDLLARSGQFDEAENIISKMSMK---PDKFLWASLLGGCRIHGNLKL 491
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ E + ++ P++ Y L +I + AG + +I + M D GV
Sbjct: 492 AQRAAEALFEIEPENPAT--YVTLANIYATAGMWSEVAKIRKTMD---DRGV 538
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+ R+ + F +A + S+ G + +A ++F + D+ +W ++I GY QNG E+
Sbjct: 330 MTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEA 389
Query: 101 KNLFQ----SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA-----MIS 151
F+ S + +++ +++ C +D DYF ++ E+ T+ A +I
Sbjct: 390 IRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIID 449
Query: 152 GFLKHGRLEEATRLFEQM 169
+ G+ +EA + +M
Sbjct: 450 LLARSGQFDEAENIISKM 467
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 292/546 (53%), Gaps = 47/546 (8%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAG 121
+S A +F+ + +++ WN + G+ N + L+ M + N S+ ++
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 122 CIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
C + + + + + + ++IS + ++GRLE+A ++F++ R+V+SY
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------ 231
TA++ G+ +G ++ AR L D +S K+VVSW MI+GYV+ F EA EL+ M
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 232 PD-------------------------------YDKNVFVVTAMITGFCKVGMLENARLL 260
PD + N+ +V +I + K G +E A L
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ + KD +S+N +I G+ + +EAL LF M++ P+D T++SV AC+ L +
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314
Query: 321 NEGRQSHVLVIR--NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
+ GR HV + + G S+ ++I MY++CG I ++ F + + +L SWN +I
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIF 374
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
FA HG A FS+M NG DPD ITF+ LLSAC H+G ++ +F M + Y I
Sbjct: 375 GFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKIT 434
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
P EHY C++D+L G ++A ++ + MP E D +W SLL AC ++ NVELGE A+
Sbjct: 435 PKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQN 494
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ +++P+N YV+LSN+YA AG W V ++R L+ ++G+ K S IEI + VH F+
Sbjct: 495 LIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFII 554
Query: 559 GDMSHP 564
GD HP
Sbjct: 555 GDKFHP 560
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 206/461 (44%), Gaps = 82/461 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++VN + IS ++ G++ A ++FD+ + + V+++ A+ITGY G++ ++ LF + V
Sbjct: 100 MYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISV 159
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
K++VSWN MI+G ++ +A + ++ M + N +T ++S + G +E +L
Sbjct: 160 KDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQL 219
Query: 166 FEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ ++D + K GEV+ A L ++ K+V+SW +I G+ +
Sbjct: 220 HSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLY 279
Query: 222 CEARELFYRM------P------------------DYDKNVFV---------------VT 242
EA LF M P D + + V +T
Sbjct: 280 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLT 339
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A+ +F+ + + S+NAMI G+A +G A A LFS M K + P
Sbjct: 340 SLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDP 399
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD T V + +ACS +L+ GR I + +
Sbjct: 400 DDITFVGLLSACSHSGMLDLGRH-----IFRSMSQDYKI--------------------- 433
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+P L + +I G +++A M + +PDG+ + SLL AC V
Sbjct: 434 ----TPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPM---EPDGVIWCSLLKACKMHNNVE 486
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ ++K+ P S Y L +I + AG+ ++ +I
Sbjct: 487 LGESYAQNLIKIEPENPGS--YVLLSNIYATAGRWDQVAKI 525
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 304/557 (54%), Gaps = 15/557 (2%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++L ++ V VNNA + S+ G ++ A+ F + K+V++WN +I+ + G + E+
Sbjct: 275 VKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAF 334
Query: 102 NLFQSMPVK------NIVSWNCMIAGCIDN---DRIDDAFDYFQAMPERNTATYNAMISG 152
NL Q M ++ N V+ ++ C+D + + Y ++ NA I
Sbjct: 335 NLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVELSNAFILA 394
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN------VV 206
+ K G L A ++F + + V S+ A++ G + G+ KA L M++ +
Sbjct: 395 YAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTI 454
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
S ++ ++K+ ++ + + + + FV T++++ + G +AR+LF+R++
Sbjct: 455 SSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKD 514
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K+ VS+NAMI+GY+QNG+ E+L LF + +Q + +VSVF ACS L L G+++
Sbjct: 515 KNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEA 574
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H V++ + V ++I MY++ G I +S F + N+ SWN II A HGH
Sbjct: 575 HGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHG 634
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++A+ + +M G PD T++ +L ACGHAG V E + F+ M I P EHY C
Sbjct: 635 KEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYAC 694
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
L+D+L+RAG+L+ A ++ MP EAD +W SLL +C +E+GE AKK+ EL+P
Sbjct: 695 LIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDK 754
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
+ YV+LSNLYA G W V RVR +MKE G+ K SWIE+G +V+ F+ GD P
Sbjct: 755 AENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKS 814
Query: 567 DKIHLELKRASVQMKSV 583
+I + +R ++ +
Sbjct: 815 AEIRVIWRRLEERISEI 831
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 216/451 (47%), Gaps = 22/451 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
VFV NA + + G + A ++FD M ++++WN++I + +NGF ++S +L M
Sbjct: 181 VFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLG 240
Query: 108 ---PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLE 160
+ ++V+ ++ C +D + NAM+ + K G L
Sbjct: 241 EEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLN 300
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK------NVVSWTVMITG 214
EA F + +NV+S+ M+ F +G+V++A L M + N V+ ++
Sbjct: 301 EAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPA 360
Query: 215 YVKNERFCEARELF-YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ + +EL Y ++V + A I + K G L +A +F I K S+N
Sbjct: 361 CLDKLQLRSLKELHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWN 420
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
A+I G+AQNG +AL L M QPD T+ S+ AC+ L+ L G++ H V+RN
Sbjct: 421 ALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRN 480
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G E + V ++++ Y CG + + F ++ NLVSWN +I+ ++Q+G ++L F
Sbjct: 481 GLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALF 540
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT--CLVDIL 451
+ G I +S+ AC + + ++K + + + + ++D+
Sbjct: 541 RKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKA---LQTEDAFVGCSIIDMY 597
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+++G ++++ ++ G+ + + W +++ A
Sbjct: 598 AKSGCIKESRKVFDGLK-DKNVASWNAIIVA 627
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 163/387 (42%), Gaps = 50/387 (12%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM- 138
D + +I Y G +S+ +F +M KN++ WN +++G N D F +
Sbjct: 78 DYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLV 137
Query: 139 ------PERNTATYNAMISGFLKHGRLEEATR--LFEQMPRRNVISYTAMLDGFMKKGEV 190
P+ T G + RL E + + +V A++ + K G V
Sbjct: 138 SDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAV 197
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------PD---------- 233
D+A + D+M N+VSW MI + +N ++ +L M PD
Sbjct: 198 DEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPV 257
Query: 234 ---------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ V V AM+ + K G L A++ F + K+ VS+
Sbjct: 258 CAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSW 317
Query: 273 NAMIAGYAQNGVAEEALRLFSGM--IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
N MI+ ++ G EA L M +M+ ++ T+++V AC L ++ H
Sbjct: 318 NTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYS 377
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
R+ F+ +V + NA I Y++CG + +E F I + SWN +I AQ+G KAL
Sbjct: 378 FRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKAL 436
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGH 417
QM +G PD T SLL AC H
Sbjct: 437 HLLFQMTYSGQQPDWFTISSLLLACAH 463
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 163/320 (50%), Gaps = 7/320 (2%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y + + T +I + G ++RL+F+ ++ K+ + +NA+++GY +NG+ + +++F
Sbjct: 75 YRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFM 134
Query: 294 GMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
++ D QPD+ T SV AC + + G H +VI+ G +V V NA++ MY +C
Sbjct: 135 DLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKC 194
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSL 411
G + ++ F + NLVSWN++I AF+++G + +M G G PD +T +++
Sbjct: 195 GAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTI 254
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L C G+V+ M + L VK+ G+ +V + S+ G L +A Q++
Sbjct: 255 LPVCAGEGEVDIGMGIHGLAVKL-GLSEEVMVNNAMVYMYSKCGYLNEA-QMSFVKNNNK 312
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
+ W ++++A + +V ++M+ + A V + N+ A D ++R
Sbjct: 313 NVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC---LDKLQLRS 369
Query: 532 LMKEQGVTKQCAYSWIEIGN 551
L + G + + + +E+ N
Sbjct: 370 LKELHGYSFRHCFQHVELSN 389
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 139/286 (48%), Gaps = 41/286 (14%)
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF-- 228
R + + T ++ + G +R + D M KN++ W +++GY +N + + ++F
Sbjct: 76 RNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMD 135
Query: 229 -----------YRMPDYDK-------------------------NVFVVTAMITGFCKVG 252
+ P K +VFV A++ + K G
Sbjct: 136 LVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCG 195
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVF 311
++ A +F+ + + VS+N+MI +++NG + ++ L M+ + + PD T+V++
Sbjct: 196 AVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTIL 255
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
C+ ++ G H L ++ G V V NA++ MYS+CG + +++++F + ++ N+V
Sbjct: 256 PVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVV 315
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNG--FDPDGITFLSLLSAC 415
SWNT+I+AF+ G +A +M + G + +T L++L AC
Sbjct: 316 SWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC 361
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++ T+ FV + I +++G I +R++FD + K+V +WNAII + +G +E+
Sbjct: 578 VLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEA 637
Query: 101 KNLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
L++ M + + ++ ++ C +++ YF+ M E Y +I
Sbjct: 638 IELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLID 697
Query: 152 GFLKHGRLEEATRLFEQMPRR 172
+ GRL++A RL +MP
Sbjct: 698 MLARAGRLDDALRLVNEMPEE 718
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 159/395 (40%), Positives = 241/395 (61%), Gaps = 2/395 (0%)
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
G +D + AL +V WT +I G+ A++LF MP+ K++ +TAM+T
Sbjct: 76 GRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPE--KSLVSLTAMLTC 133
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K G L+ AR+LF+ ++ +D V +N MI GY QNG+ EAL LF M+K +P++ T+
Sbjct: 134 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 193
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
+SV +AC L L GR H + NG + NV V A++ MYS+CG + D+ L F +I
Sbjct: 194 LSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD 253
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
++V+WN++I +A HG ++AL F M G P ITF+ +LSACGH+G V E D+
Sbjct: 254 KDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI 313
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
F M YGI P EHY C+V++L RAG +E+A+++ + M E D +WG+LL AC ++
Sbjct: 314 FNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 373
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
+ LGE + + + + NS Y++LSN+YAA G W V R+R +MK+ GV K+ S I
Sbjct: 374 KIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSI 433
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
E+ NKVH FL G ++HP +I++ L+ + +KS
Sbjct: 434 EVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKS 468
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 196/436 (44%), Gaps = 55/436 (12%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI 150
Y G L S LF ++ W +I G + A F MPE++ + AM+
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAML 131
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD----------KARALSDYM 200
+ + KHG L+ A LF+ M R+ + + M+DG+ + G + KA+A + +
Sbjct: 132 TCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEV 191
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
+ +V+S + G +++ R+ + + NV V TA++ + K G LE+ARL+
Sbjct: 192 TVLSVLSACGQL-GALESGRWVHS---YIENNGIQFNVHVGTALVDMYSKCGSLEDARLV 247
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F++I KD V++N+MI GYA +G ++EAL+LF M +M + P + T + + +AC +
Sbjct: 248 FDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWV 307
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
EG + N + Y GI P + + ++
Sbjct: 308 TEGWD---------------IFNKMKDEY----GI-----------EPKIEHYGCMVNLL 337
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
+ GH E+A M + +PD + + +LL AC GK+ + EL+V + +
Sbjct: 338 GRAGHVEQAYELVKNMNI---EPDPVLWGTLLGACRLHGKIALGEKIVELLVDQN--LAN 392
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
S Y L +I + G + ++ M D+GV I +N ++ E A +
Sbjct: 393 SGTYILLSNIYAAVGNWDGVARLRTMM---KDSGV-KKEPGCSSIEVNNKVHEFLAGGLN 448
Query: 501 ELDPQNSAVYVMLSNL 516
P+ +Y+ML +
Sbjct: 449 H--PKRKEIYMMLEEI 462
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 12 LKRILFPPILRILSTPDSCGNFTPHSSNCLIRLF----STQY-VFVNNAKISALSRAGKI 66
LK P + +LS +CG S + + Q+ V V A + S+ G +
Sbjct: 182 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 241
Query: 67 SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGC 122
AR +FD++ KDV+ WN++I GY +GF QE+ LF+SM + +++ +++ C
Sbjct: 242 EDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 301
Query: 123 IDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ + + +D F M E Y M++ + G +E+A L + M
Sbjct: 302 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNM 353
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 312/554 (56%), Gaps = 20/554 (3%)
Query: 39 NCLIRLFSTQY-VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CL F + V+V + I SR + AR LFD+M +D+ +WNA+I+GY Q+G
Sbjct: 106 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 165
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
+E+ L + + V+ +++ C +A D+ R ++ I L+
Sbjct: 166 KEALTLSNGLRAMDSVTVVSLLSACT------EAGDF-----NRGVTIHSYSIKHGLESE 214
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVM 211
L + ++F++M R++IS+ +++ + + +A +L M + +
Sbjct: 215 LLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 274
Query: 212 ITGYVKNERFCEARELF-YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
I + + R C + + F R + +++ + A++ + K+G++++AR +F + D +
Sbjct: 275 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 334
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
S+N +I+GYAQNG A EA+ +++ M + ++ + T VSV ACS L +G + H
Sbjct: 335 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 394
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+++NG +V V ++ MY +CG + D+ F QI N V WNT+IA HGH EKA
Sbjct: 395 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 454
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
++ F +M G PD ITF++LLSAC H+G V+E FE+M YGI PS +HY C+VD
Sbjct: 455 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVD 514
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+ RAGQLE A + + M + D +WG+LL+AC ++ NV+LG++A++ + E++P++
Sbjct: 515 MYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 574
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
+V+LSN+YA+AG W V +R + +G+ K +S +E+ NKV F G+ +HP +++
Sbjct: 575 HVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEM 634
Query: 570 HLELKRASVQMKSV 583
+ EL ++K +
Sbjct: 635 YRELTALQAKLKMI 648
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 291/540 (53%), Gaps = 34/540 (6%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
++ AR++FD+M KD I WN +I+GY +N ES +F +++++ +C +D
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF-----RDLINESCTR---LD 220
Query: 125 NDRIDDAFDYFQAMPERNTA-------------TYNAMISGFL----KHGRLEEATRLFE 167
+ D + E +++ +++GF+ K G+++ A+ LF
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFR 280
Query: 168 QMPRRNVISYTAMLDGFMKKGEVD------KARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ R ++++Y AM+ G+ GE + K LS + + V ++G++
Sbjct: 281 EFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLM---L 337
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
A + ++ + V TA+ T + K+ +E+AR LF+ K S+NAMI+GY Q
Sbjct: 338 IYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG+ E+A+ LF M + P+ T+ + +AC+ L L+ G+ H LV FE+++ V
Sbjct: 398 NGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
A+I MY++CG I ++ F + N V+WNT+I+ + HGH ++AL FS+M +G
Sbjct: 458 STALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGI 517
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
P +TFL +L AC HAG V E ++F M+ YG PS +HY C+VDIL RAG L++A
Sbjct: 518 APTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRAL 577
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
Q + MP + VW +LL AC I+ + L ++K+ ELDP N +V+LSN+++A
Sbjct: 578 QFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADR 637
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+ VR K++ + K Y+ IEIG H F GD SHP + IH +L++ +M+
Sbjct: 638 NYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMR 697
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 176/390 (45%), Gaps = 33/390 (8%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+S YV IS S+ GKI A LF + D++ +NA+I GY NG + S +LF
Sbjct: 253 YSHDYVL--TGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 105 QSMPVKNI------------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG 152
+ + + VS + M+ I + F +T+ A+ +
Sbjct: 311 KELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNF-------LSHTSVSTALTTV 363
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+ K +E A +LF++ P +++ S+ AM+ G+ + G + A +L M V I
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTI 423
Query: 213 TGYVKNERFCEAREL------FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
T + A L R D++ +++V TA+I + K G + AR LF+ +
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPK 483
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K+ V++N MI+GY +G +EAL +FS M+ + P T + V ACS L+ EG +
Sbjct: 484 KNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 327 -HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIAAFAQH 383
+ ++ R GFE +V V+ + R G L L F + P W T++ A H
Sbjct: 544 FNSMIHRYGFEPSVKHYACVVDILGRAGH-LQRALQFIEAMPIQPGPSVWETLLGACRIH 602
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
A + L DPD + + LLS
Sbjct: 603 KDTNLARTVSEK--LFELDPDNVGYHVLLS 630
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 191/445 (42%), Gaps = 72/445 (16%)
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAM 149
G + ++++F S+ ++ +N ++ G N+ + F + + N++TY
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFA 125
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG--------------FMKKGEVDKARA 195
IS A F VI A++DG + K V+ AR
Sbjct: 126 IS----------AASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARK 175
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD-------------------- 235
+ D M K+ + W MI+GY KNE + E+ ++F + +
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 236 ------------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ +V+T I+ + K G ++ A LF + D V++NAMI
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIH 295
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GY NG E +L LF ++ + +TLVS+ L L+ H +++ F +
Sbjct: 296 GYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLI---YAIHGYSLKSNFLS 352
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ SV A+ T+YS+ I + F + +L SWN +I+ + Q+G E A+ F +M
Sbjct: 353 HTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
+ F P+ +T +LSAC G ++ + +L V+ S T L+ + ++ G +
Sbjct: 413 NSEFSPNPVTITCILSACAQLGALSLGKWVHDL-VRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 458 EKAWQITQGMPFEADTGVWGSLLAA 482
+A ++ MP + + W ++++
Sbjct: 472 AEARRLFDFMPKKNEV-TWNTMISG 495
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 23/280 (8%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D + + + ++ + K +E+AR +F+R+ KD + +N MI+GY +N + E++++F
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 295 MIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
+I + D TL+ + A + LQ L G Q H L + G ++ V I++YS+CG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I + FR+ P++V++N +I + +G E +L F ++ L+G T +SL+
Sbjct: 271 KIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVP 330
Query: 414 ACGHAGKVNESMDLFELMVKVYG------IIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
GH L+ ++G + + T L + S+ ++E A ++
Sbjct: 331 VSGH----------LMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDES 380
Query: 468 PFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
P E W ++++ N L E A RE+ QNS
Sbjct: 381 P-EKSLPSWNAMISGYTQN---GLTEDAISLFREM--QNS 414
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 104/229 (45%), Gaps = 3/229 (1%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ ++ ++T + +G + AR +F +Q D FN ++ G++ N +L +F+
Sbjct: 48 FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFA 107
Query: 294 GMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ K D++P+ +T +A S + G H I +G ++ + + + ++ MY +
Sbjct: 108 HLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKF 167
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY-EKALIFFSQMGLNGFDPDGITFLSL 411
+ D+ F ++ + + WNT+I+ + ++ Y E +F + + D T L +
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDI 227
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
L A ++ M + L K G T + + S+ G+++ A
Sbjct: 228 LPAVAELQELRLGMQIHSLATKT-GCYSHDYVLTGFISLYSKCGKIKMA 275
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 300/543 (55%), Gaps = 28/543 (5%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G + +A ++F++M ++ +TW +IT Q G+ E+ +LF M + ++G I
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVI 278
Query: 124 D---NDRIDDAFDYFQAMPERNTATYN-----AMISGFLK---HGRLEEATRLFEQMPRR 172
N + + R+ T + +I+ + K G + A ++F+Q+
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338
Query: 173 NVISYTAMLDGFMKKGEVDK-----------ARALSDYMSFKNVVSWTVMITGYVKNER- 220
NV S+TAM+ G+++KG D+ + ++ +F + + + E+
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
F A +L + + V ++I+ + + G +++AR F+ + K+ +S+N +I YA
Sbjct: 399 FTHAVKLGFSSVNC-----VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYA 453
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
+N +EEAL LF+ + M T S+ + +++ + +G Q H VI++G + N S
Sbjct: 454 KNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
VCNA+I+MYSRCG I + F + N++SW +II FA+HG +AL F +M G
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEG 573
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
P+ +T++++LSAC H G VNE F+ M +G+IP EHY C+VDIL R+G L +A
Sbjct: 574 VRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEA 633
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
Q MP++AD VW + L AC ++ N+ELG+ AAK + E +P + A Y++LSNLYA+
Sbjct: 634 IQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYAST 693
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
W +V+ +R MKE+ + K+ SW+E+ NKVH F GD SHP +I+ EL+ SV++
Sbjct: 694 SKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKI 753
Query: 581 KSV 583
K +
Sbjct: 754 KKL 756
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 121/242 (50%), Gaps = 9/242 (3%)
Query: 185 MKKGEVDKARALSDYM----SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
+ G + KA + ++M S ++ ++++ + ++ F + ++ D +
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 241 VT--AMITGFCKVGMLENARLLFERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
VT ++I+ + K G E A +F+ + +D +S++AM++ +A N + AL F MI+
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF-EANVSVCNAVITMYSRCGGIL 356
P++ + ACS + ++ G V++ G+ +++V V +I M+ + G L
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 357 DSEL-AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
S F ++ N V+W +I Q G+ +A+ F +M L+G++PD T ++SAC
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISAC 281
Query: 416 GH 417
+
Sbjct: 282 AN 283
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N+ IS +R+G+I AR+ FD + K++I++N +I Y +N +E+ LF + +
Sbjct: 413 VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQG 472
Query: 112 I----VSWNCMIAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEEAT 163
+ ++ +++G I ++ + N + NA+IS + + G +E A
Sbjct: 473 MGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAF 532
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
++FE M RNVIS+T+++ GF K G +A L
Sbjct: 533 QVFEDMEDRNVISWTSIITGFAKHGFATQALEL 565
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK- 110
V NA IS SR G I +A Q+F+ M ++VI+W +IITG+ ++GF ++ LF M +
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEG 573
Query: 111 ---NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
N+V++ +++ C +++ + +F++M + Y M+ + G L EA
Sbjct: 574 VRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEA 633
Query: 163 TRLFEQMPRR 172
+ MP +
Sbjct: 634 IQFINSMPYK 643
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG +A+ M+ PD T C + + G H + ++ + +
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
N++I++YS+CG + F+ + S +L+SW+ +++ FA + +AL+ F M NG
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC-LVDILSRA-GQLE 458
+ P+ F + AC A V+ +F +VK G + S C L+D+ + G L
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKT-GYLQSDVCVGCGLIDMFVKGRGDLV 222
Query: 459 KAWQITQGMPFEADTGVW 476
A+++ + MP E + W
Sbjct: 223 SAFKVFEKMP-ERNAVTW 239
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 306/544 (56%), Gaps = 12/544 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQ---- 105
VFV N+ ++ ++ G + A+ +F+ M T+D+++WN ++ G N E+ LF
Sbjct: 236 VFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRA 295
Query: 106 SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEE 161
+M ++ +I C + ++ A + + A+ + K G L +
Sbjct: 296 TMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELAD 355
Query: 162 ATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
A +F RNV+S+TA++ G ++ G++ A L M V+ + +K
Sbjct: 356 ALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASL 415
Query: 221 FCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
++ ++ +Y FV TA++ + K G E+A +F+ I+ KD V+++AM++
Sbjct: 416 SILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSC 475
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL-LNEGRQSHVLVIRNGFEA 337
+AQ G E A LF+ M ++P++ T+ SV AC+ +++GRQ H + I+ +
Sbjct: 476 HAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHD 535
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ V +A+++MYSR G I +++ F + +LVSWN++I+ +AQHG+ KA+ F QM
Sbjct: 536 AICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQME 595
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
+G DG+TFL+++ C H G V E F+ MV+ + I P+ EHY C+VD+ SRAG+L
Sbjct: 596 ASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKL 655
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
++ + + MPF A VW +LL AC ++ NVELG+ +A K+ L+P +S+ YV+LSN+Y
Sbjct: 656 DETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIY 715
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
AAAG W++ VR LM + V K+ SWI+I NKVH F+ D SHP D+I+ +LK
Sbjct: 716 AAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVII 775
Query: 578 VQMK 581
++K
Sbjct: 776 TRLK 779
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 218/489 (44%), Gaps = 62/489 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQM---------TTKDVITWNAIITGYWQNGFLQES 100
V V++A +S + +A + R L +Q+ +V +++ Y + G + E
Sbjct: 95 VLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEG 154
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKH 156
+F+ MP KN+V+W ++ GC + F M N T+ +++S
Sbjct: 155 IEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQ 214
Query: 157 GRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
G L+ R+ Q R +V ++++ + K G V+ A+++ ++M +++VSW ++
Sbjct: 215 GALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLM 274
Query: 213 TGYVKNERFCEARELFYR----MPDYDKNVF----------------------------- 239
G NE EA +LF+ M ++ +
Sbjct: 275 AGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFH 334
Query: 240 ----VVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
V+TA+ + K G L +A +F ++ VS+ A+I+G QNG A+ LFS
Sbjct: 335 LTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSR 394
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + + P++ T ++ A +L +L Q H VI+ ++ V A++ YS+ G
Sbjct: 395 MREDRVMPNEFTYSAMLKA--SLSILPP--QIHAQVIKTNYQHIPFVGTALLASYSKFGS 450
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
D+ F+ I ++V+W+ +++ AQ G E A F++M + G P+ T S++ A
Sbjct: 451 TEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDA 510
Query: 415 CG-HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
C + V++ + +K Y + + LV + SR G ++ A QI + D
Sbjct: 511 CACPSAGVDQGRQFHAISIK-YRYHDAICVSSALVSMYSRKGNIDSA-QIVFERQTDRDL 568
Query: 474 GVWGSLLAA 482
W S+++
Sbjct: 569 VSWNSMISG 577
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 174/403 (43%), Gaps = 61/403 (15%)
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM---------PRRNVISYTAM 180
+ D F +A +S LK R L EQ+ R V + T++
Sbjct: 82 EVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSL 141
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD- 233
+D +MK G V + + + M KNVV+WT ++TG + E LF+RM P+
Sbjct: 142 VDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNP 201
Query: 234 ------------------------------YDKNVFVVTAMITGFCKVGMLENARLLFER 263
+VFV +++ + K G++E+A+ +F
Sbjct: 202 FTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNW 261
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++ +D VS+N ++AG N EAL+LF + +T +V C+ L+ L
Sbjct: 262 METRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALA 321
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQ 382
RQ H V+++GF +V A+ YS+CG + D+ F S N+VSW II+ Q
Sbjct: 322 RQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQ 381
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+G A++ FS+M + P+ T+ ++L A S+ + + I + +
Sbjct: 382 NGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA---------SLSILPPQIHAQVIKTNYQ 432
Query: 443 HY----TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
H T L+ S+ G E A I + M + D W ++L+
Sbjct: 433 HIPFVGTALLASYSKFGSTEDALSIFK-MIEQKDVVAWSAMLS 474
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 129/260 (49%), Gaps = 1/260 (0%)
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
T+++ + K G + +FE + K+ V++ +++ G A + E + LF M +
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P+ T SV +A ++ L+ G++ H ++ G ++V VCN+++ MY++CG + D++
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F + + ++VSWNT++A + +AL F + T+ +++ C + ++
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ L ++K +G + T L D S+ G+L A I + W ++++
Sbjct: 319 ALARQLHSCVLK-HGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIIS 377
Query: 482 ACVINLNVELGELAAKKMRE 501
C+ N ++ L + +MRE
Sbjct: 378 GCIQNGDIPLAVVLFSRMRE 397
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 4/233 (1%)
Query: 256 NARLLFERIQPKDC-VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
AR + I +D V N ++ YA+ G+ E L FS + + D ATL V AC
Sbjct: 50 GARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKAC 109
Query: 315 SALQLLNEGRQSHVLVIRNGFE-ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
++ G Q H L ++ G + VS +++ MY +CG + + F + N+V+W
Sbjct: 110 RSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+++ A + + + F +M G P+ TF S+LSA G ++ + VK
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+G S L+++ ++ G +E A + M D W +L+A +N
Sbjct: 230 -FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLMAGLQLN 280
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 125/312 (40%), Gaps = 45/312 (14%)
Query: 4 NSYFHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRA 63
+Y H ++ L + ST D+ F ++ + V +A +S ++A
Sbjct: 429 TNYQHIPFVGTALLASYSKFGSTEDALSIF---------KMIEQKDVVAWSAMLSCHAQA 479
Query: 64 GKISAARQLFDQMTTKDV----ITWNAIITGYWQNGFLQESKNLFQSMPVK-----NIVS 114
G A LF++M + + T +++I + F ++ +K I
Sbjct: 480 GDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICV 539
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
+ +++ ID A F+ +R+ ++N+MISG+ +HG +A F QM +
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGI 599
Query: 175 ----ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV-----MITGYVKNERFCEAR 225
+++ A++ G G V + + D M + ++ T+ M+ Y + + E
Sbjct: 600 QMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETM 659
Query: 226 ELFYRMPDYDKNVFVVTAMI----TGFCKV------GMLENARLLFERIQPKDCVSFNAM 275
L MP F AM+ G C+V G +LL ++P D ++ +
Sbjct: 660 SLIRDMP------FPAGAMVWRTLLGACRVHKNVELGKFSADKLL--SLEPHDSSTYVLL 711
Query: 276 IAGYAQNGVAEE 287
YA G +E
Sbjct: 712 SNIYAAAGKWKE 723
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 293/540 (54%), Gaps = 38/540 (7%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
V N ++ S+ ++ AR+LFD M D++ WN +I GY QNGF+ ++ LF
Sbjct: 147 LVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLF------ 200
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL-KHGRLEE-------- 161
N MI+ I D I + ++ E ++ I G++ +HG + +
Sbjct: 201 -----NEMISAGIKPDSITFT-SFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALI 254
Query: 162 -----------ATRLFEQMPRRNVISYTAMLDGF----MKKGEVDKARALSDYMSFKNVV 206
A ++F + +++ YTAM+ G+ M K ++ R L N +
Sbjct: 255 DLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNAL 314
Query: 207 SWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
+++ ++ REL + + ++ V +A++ + K G L+ A L+F RI
Sbjct: 315 TFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRI 374
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
KD + +N++I ++Q+G EEA+ LF M ++ D T+ + +AC+ + L+ G+
Sbjct: 375 SIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGK 434
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
+ H +I+ FE+++ +A+I MY++CG + + L F + N V+WN+IIAA+ HG
Sbjct: 435 EIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHG 494
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
+ +L F M G PD ITFL++LS+CGHAG+V + + F M + YGI EHY
Sbjct: 495 YLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHY 554
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+ D+ RAG L++A+++ MPF VWG+LL AC ++ NVEL E+A++ + +L+P
Sbjct: 555 ACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEP 614
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
+NS Y++L+++ A AG WR V +++ LMKE+GV K SWIE+ N F D SHP
Sbjct: 615 KNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHP 674
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 236/510 (46%), Gaps = 51/510 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM- 138
D+ +++I Y NG +++++ F M K+ V WN MI G + D A F+ M
Sbjct: 44 DMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMM 103
Query: 139 ---PERNTATY-----------------------------------NAMISGFLKHGRLE 160
+ ++ T+ N +++ + K +L
Sbjct: 104 SSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLG 163
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYV 216
+A +LF+ MP+ +++ + M+ G+++ G +D A L + M + +++T +
Sbjct: 164 DARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLA 223
Query: 217 KNERFCEARELFYRMPDYDK--NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
++ + +E+ + + +V++ +A+I + K A +F D V + A
Sbjct: 224 ESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTA 283
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI+GY NG+ ++AL +F +++ M P+ T S+ AC+ L + GR+ H +I+N
Sbjct: 284 MISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNE 343
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
E V +A++ MY++CG + + L F +I + + WN+II +F+Q G E+A+ F
Sbjct: 344 LEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFR 403
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE-HYTCLVDILSR 453
QMG+ G D +T + LSAC + ++ ++ M+K G S + L+++ ++
Sbjct: 404 QMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIK--GAFESDLFDMSALINMYAK 461
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE--LDPQNSAVYV 511
G+L A + M E + W S++AA + + M E + P +
Sbjct: 462 CGKLNIARLVFNLMQ-EKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLT 520
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
+LS+ A + V R + +E G+ Q
Sbjct: 521 ILSSCGHAGQVEDGVRYFRCMTEEYGIPAQ 550
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 121/217 (55%), Gaps = 1/217 (0%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+D ++FV +++I + G +E+AR F+++ KDCV +N MI GY Q G ++ A++LF
Sbjct: 41 FDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFK 100
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ + +PD T V + + ++ GRQ H LV+R+G + V N ++T+YS+
Sbjct: 101 DMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGR 160
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ F + +LV WN +I + Q+G + A + F++M G PD ITF S L
Sbjct: 161 QLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLP 220
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
+ + + + ++ +V+ +G+I + L+D+
Sbjct: 221 SLAESSSLKQIKEIHGYIVR-HGVILDVYLNSALIDL 256
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 2/192 (1%)
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M+ + PD T V C+ L + G+ +++ GF+ ++ V +++I +Y+ G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I D+ F ++ + V WN +I + Q G + A+ F M + PD +TF +LS
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
V L L+V+ G+ LV + S+ QL A ++ MP + D
Sbjct: 121 SCSEAMVEYGRQLHGLVVRS-GLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMP-QIDLV 178
Query: 475 VWGSLLAACVIN 486
VW ++ V N
Sbjct: 179 VWNRMIGGYVQN 190
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F +A I+ ++ GK++ AR +F+ M K+ + WN+II Y +G+L +S LF +M
Sbjct: 449 LFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLE 508
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
+ I +++ +++ C +++D YF+ M E Y M F + G L+
Sbjct: 509 EGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLD 568
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMK-KGEVDKARALSDYM 200
EA + MP S L G + G V+ A S Y+
Sbjct: 569 EAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYL 609
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 168/460 (36%), Positives = 263/460 (57%), Gaps = 6/460 (1%)
Query: 127 RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
R+D + F + + A+I G G E+A + QM + V +K
Sbjct: 77 RLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK 136
Query: 187 KGEVDKARALSDY---MSF-KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
++ +AL + F ++ T ++ Y + A++LF MP+ K++ +T
Sbjct: 137 LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE--KSLVSLT 194
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
AM+T + K G L+ AR+LF+ ++ +D V +N MI GY QNG+ EAL LF M+K +P
Sbjct: 195 AMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKP 254
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
++ T++SV +AC L L GR H + NG + NV V A++ MYS+CG + D+ L F
Sbjct: 255 NEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVF 314
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+I ++V+WN++I +A HG ++AL F M G P ITF+ +LSACGH+G V
Sbjct: 315 DKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVT 374
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
E D+F M YGI P EHY C+V++L RAG +E+A+++ + M E D +WG+LL A
Sbjct: 375 EGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 434
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
C ++ + LGE + + + + NS Y++LSN+YAA G W V R+R +MK+ GV K+
Sbjct: 435 CRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEP 494
Query: 543 AYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
S IE+ NKVH FL G ++HP +I++ L+ + +KS
Sbjct: 495 GCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKS 534
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 194/482 (40%), Gaps = 86/482 (17%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQESKN 102
TQ V N S++ + I + L Q D+ ++ Y + G + ++
Sbjct: 121 TQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 180
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
LF +MP K++VS M+ + +D A F M ER+ +N MI G+ ++G EA
Sbjct: 181 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 240
Query: 163 TRLFEQM----PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITG 214
LF +M + N ++ ++L + G ++ R + Y+ NV T ++
Sbjct: 241 LVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDM 300
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
Y K +AR +F ++ D D V++N+
Sbjct: 301 YSKCGSLEDARLVFDKIDDKD---------------------------------VVAWNS 327
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI GYA +G ++EAL+LF M +M + P + T + + +AC + EG
Sbjct: 328 MIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWD--------- 378
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ N + Y GI P + + ++ + GH E+A
Sbjct: 379 ------IFNKMKDEY----GI-----------EPKIEHYGCMVNLLGRAGHVEQAYELVK 417
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
M + +PD + + +LL AC GK+ + EL+V + +S Y L +I +
Sbjct: 418 NMNI---EPDPVLWGTLLGACRLHGKIALGEKIVELLVDQN--LANSGTYILLSNIYAAV 472
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G + ++ M D+GV I +N ++ E A + P+ +Y+ML
Sbjct: 473 GNWDGVARLRTMM---KDSGV-KKEPGCSSIEVNNKVHEFLAGGLNH--PKRKEIYMMLE 526
Query: 515 NL 516
+
Sbjct: 527 EI 528
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 37/266 (13%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ +G L+ + LF R Q + A+I G+A G+ E+AL ++ M+ ++P+ T
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 131
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
S+ C + G+ H ++ GF++++ V ++ +Y+R G ++ ++ F +
Sbjct: 132 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 187
Query: 368 PNLVS-------------------------------WNTIIAAFAQHGHYEKALIFFSQM 396
+LVS WN +I + Q+G +AL+ F +M
Sbjct: 188 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 247
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
P+ +T LS+LSACG G + ES ++ GI + T LVD+ S+ G
Sbjct: 248 LKAKAKPNEVTVLSVLSACGQLGAL-ESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 306
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAA 482
LE A + + + D W S++
Sbjct: 307 LEDARLVFDKID-DKDVVAWNSMIVG 331
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 12 LKRILFPPILRILSTPDSCGNFTPHSSNCLIRLF----STQY-VFVNNAKISALSRAGKI 66
LK P + +LS +CG S + + Q+ V V A + S+ G +
Sbjct: 248 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 307
Query: 67 SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGC 122
AR +FD++ KDV+ WN++I GY +GF QE+ LF+SM + +++ +++ C
Sbjct: 308 EDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 367
Query: 123 IDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ + + +D F M E Y M++ + G +E+A L + M
Sbjct: 368 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNM 419
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H ++ R+G + + + + Y+ G + S F + +P++ W II A G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
+E+AL F++QM G +P+ TF S+L C + L VK+ G
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKL-GFDSDLYVR 162
Query: 445 TCLVDILSRAGQLEKAWQITQGMP 468
T L+D+ +R G + A Q+ MP
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMP 186
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 190/554 (34%), Positives = 296/554 (53%), Gaps = 26/554 (4%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQN---------GFLQ 98
Q +FV I+A S +++A +F+ + +V +N+II + N F Q
Sbjct: 51 QDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQ 110
Query: 99 ESKN-LFQSMPVKNIVSWNCMIAGCIDNDRIDDA----FDYFQAMPERNTATYNAMISGF 153
KN LF + C + R+ A F ++ + N++I +
Sbjct: 111 MQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYG-----DIFVPNSLIDSY 165
Query: 154 LKHGR--LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ G L+ A LF M R+V+++ +M+ G ++ GE++ A L D M +++VSW M
Sbjct: 166 SRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDMVSWNTM 225
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ GY K A ELF RMP +N+ + M+ G+ K G ++ AR+LF+R K+ V
Sbjct: 226 LDGYAKAGEMDRAFELFERMPQ--RNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVL 283
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ +IAGYA+ G EA L+ M + ++PDD L+S+ AC+ +L G++ H +
Sbjct: 284 WTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMR 343
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDS--ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
R F V NA I MY++CG LD+ ++ + ++VSWN++I FA HGH EKA
Sbjct: 344 RWRFRCGTKVLNAFIDMYAKCG-CLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKA 402
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L FS+M GF+PD TF+ LL AC HAG VNE F M KVYGI+P EHY C++D
Sbjct: 403 LELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMD 462
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L R G L++A+ + + MP E + + G+LL AC ++ +V+ +++ +++P +
Sbjct: 463 LLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHNDVDFARAVCEQLFKVEPTDPGN 522
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
Y +LSN+YA AG W +V VRL M G K S IE+ +VH F D SHP D I
Sbjct: 523 YSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEVEEEVHEFTVFDQSHPKSDDI 582
Query: 570 HLELKRASVQMKSV 583
+ + R ++ V
Sbjct: 583 YKMIDRLVQDLRQV 596
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 143/339 (42%), Gaps = 50/339 (14%)
Query: 23 ILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVI 82
++ + CG+ + L + V N+ I L R G++ A +LFD+M +D++
Sbjct: 161 LIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDMV 220
Query: 83 TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN 142
+WN ++ GY + G + + LF+ MP +NIVSW+ M+ G +D A F P +N
Sbjct: 221 SWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKN 280
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMP-------------------------------- 170
+ +I+G+ + G + EAT L+ +M
Sbjct: 281 VVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHA 340
Query: 171 -------RRNVISYTAMLDGFMKKGEVDKA-RALSDYMSFKNVVSWTVMITGYVKNERFC 222
R A +D + K G +D A S M+ K+VVSW MI G+ +
Sbjct: 341 SMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGE 400
Query: 223 EARELFYRM-PD-YDKNVFVVTAMITGFCKVGMLENARLLFERIQP-----KDCVSFNAM 275
+A ELF RM P+ ++ + + ++ G++ R F ++ + M
Sbjct: 401 KALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCM 460
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ + G +EA L M M+P+ L ++ AC
Sbjct: 461 MDLLGRGGHLKEAFTLLR---SMPMEPNAIILGTLLNAC 496
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 109/259 (42%), Gaps = 34/259 (13%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
CS L +N Q H V++ ++ V +I +S C + + F + PN+ +
Sbjct: 31 CSNLDSVN---QIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLY 87
Query: 374 NTIIAAFAQHGHYEKALIF--FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
N+II A A H +L F F QM NG PD T+ LL AC + + +
Sbjct: 88 NSIIRAHA-HNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSL-PLVRMIHAH 145
Query: 432 VKVYG-----IIPSSEHYTCLVDILSRAGQ--LEKAWQITQGMPFEADTGVWGSLLAACV 484
V+ +G +P+S L+D SR G L+ A + M E D W S++
Sbjct: 146 VEKFGFYGDIFVPNS-----LIDSYSRCGSAGLDGAMSLFLAMK-ERDVVTWNSMIGGL- 198
Query: 485 INLNVELGEL--AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
V GEL A K E+ ++ + + + YA AG ++ R L +
Sbjct: 199 ----VRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAG---EMDRAFELFERMPQRNIV 251
Query: 543 AYSWIEIGNKVHYFLGGDM 561
++S + G Y GGDM
Sbjct: 252 SWSTMVCG----YSKGGDM 266
>gi|357521583|ref|XP_003631080.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525102|gb|AET05556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 290/554 (52%), Gaps = 54/554 (9%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN 125
+ AR+LFD M ++ I+WN +I+GY ++G L +++ LF+ PV+++ +W M+ + +
Sbjct: 188 LGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQS 247
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
+D+A F MP + YN MI+G++++ +++ A LFE MP RNV S+ ++ G+
Sbjct: 248 GMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYG 307
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------------- 232
+ G++ +AR L D M+ ++ VSW +I GY + + + + +M
Sbjct: 308 QNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCC 367
Query: 233 ------------------------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
YD V A++ +CK G + A +FER+Q KD
Sbjct: 368 ALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKD 427
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
+S+N M+AGYA++G +AL +F M +PD+ T++ +++ ++ N + +
Sbjct: 428 IISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITML-IWSNNRLRKVGNTWVPTSL 486
Query: 329 L-VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ + N + + SV E +I S + II+A+ H
Sbjct: 487 MNPLGNTWVTSTSVTEK------------QEERRVNRIGSVCITFLLVIISAYKYRLH-- 532
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
A F L I + +L AC H G + + F M K YGI P+S+HY C+
Sbjct: 533 -ACHLFPCNWLLSLYLTCIHNVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCM 591
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
+D+L RAG LE+A + + MPFE D WG+LL A I+ N ELGE AA+ + ++P N+
Sbjct: 592 IDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAELGEKAAEMVFNMEPNNA 651
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
+YV+LSNLYA G W DV ++RL M++ G+ K YSW+E+ NK+H F GD HP D
Sbjct: 652 GMYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHPEKD 711
Query: 568 KIHLELKRASVQMK 581
+I+ L+ ++MK
Sbjct: 712 RIYAYLEEIDLKMK 725
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 211/356 (59%), Gaps = 2/356 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N +S R+G + A+ +FD M KD I+WN ++ Y QNG L+E++ LF+S ++
Sbjct: 114 NVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESKVDWELI 173
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWNC++ G + + DA F MP RN ++N MISG+ + G L +A RLFE+ P R+
Sbjct: 174 SWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRD 233
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++TAM+ +++ G +D+AR + D M K +++ VMI GYV+ ++ ARELF MP
Sbjct: 234 VFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMARELFEAMP- 292
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+NV +I+G+ + G + AR LF+ + +DCVS+ A+IAGYAQ G E+ + +
Sbjct: 293 -CRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLV 351
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + +T + C+ + L G+Q H ++ G++ V NA++ MY +CG
Sbjct: 352 KMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCG 411
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
I ++ F ++ +++SWNT++A +A+HG +AL+ F M GF PD IT L
Sbjct: 412 SIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITML 467
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 216/440 (49%), Gaps = 55/440 (12%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
Y+ IS R G A ++FD M K++ +WN ++TGY +N L +++NLF MP
Sbjct: 47 YIVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMP 106
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
K+ VSWN M++G + + +D+A F MP +++ ++N +++ ++++GRLEEA RLFE
Sbjct: 107 QKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFES 166
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
+IS+ ++ G++K+ + AR L D+M +N +SW MI+GY ++ +AR LF
Sbjct: 167 KVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLF 226
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
P D VF TAM+ + + GML+ AR +F+ + K +++N MIAGY Q + A
Sbjct: 227 EESPVRD--VFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMA 284
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
LF M C NV N +I+
Sbjct: 285 RELFEAM-----------------PCR----------------------NVGSWNTIISG 305
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y + G I + F + + VSW IIA +AQ GHYEK + +M +G + TF
Sbjct: 306 YGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTF 365
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYG-IIPSSEHYTCLV-----DILSRAGQLEKAWQ 462
LS C M L +V+G + + CLV ++ + G + +A+
Sbjct: 366 CCALSTCA-------GMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYD 418
Query: 463 ITQGMPFEADTGVWGSLLAA 482
+ + M + D W ++LA
Sbjct: 419 VFERMQLK-DIISWNTMLAG 437
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 287/500 (57%), Gaps = 16/500 (3%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N +I Y + +Q + +F +PVKN SWN +I+ + ++A + MP+ N
Sbjct: 53 NRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLV 112
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRR--NVI----SYTAMLDGFMKKGEVDKARALSD 198
+YN++ISG HG +E+ +F+ M ++ NV+ + +++ G + R +
Sbjct: 113 SYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHG 172
Query: 199 YMSF----KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
N++ +I Y K + +F RMP+ D V T+M+ + + L
Sbjct: 173 AAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPERD--VVSWTSMVAAYAQASRL 230
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E+A LF ++Q K+ VS+ A+IAG+AQNG +EAL LF M + + P T SV +AC
Sbjct: 231 EDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSAC 290
Query: 315 SALQLLNEGRQSHVLVIRN---GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
+ L L+ G++ H +IR+ + N+ + NA+I MY +CG + + F+ +H ++V
Sbjct: 291 ADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIV 350
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SWN++I FAQ+GH E++L F +M P+ +TFL LLSAC H G V+E + + + M
Sbjct: 351 SWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSM 410
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD-TGVWGSLLAACVINLNVE 490
K YG+ P S+HY ++D+L R +LE+A + + P +D G+WG+LL AC I+ N++
Sbjct: 411 EKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMD 470
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
L AA+ + +L+P N+A YVM+ N+YAAA W + +VR LM E+G+ K+ A SWIE+
Sbjct: 471 LARRAAEVLFQLEPGNAARYVMVYNIYAAASRWDEARQVRRLMMERGLRKEAACSWIEVR 530
Query: 551 NKVHYFLGGDMSHPCIDKIH 570
N H F+ + SH I++++
Sbjct: 531 NTRHQFVAKERSHCQINEVY 550
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 219/507 (43%), Gaps = 122/507 (24%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNL 103
+F+T F+ N I S+ I +A ++F + K+ +WN II+ Y ++G E+ NL
Sbjct: 46 IFTT---FLANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNL 102
Query: 104 FQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------------------------- 138
MP N+VS+N +I+G + ++ + F+ M
Sbjct: 103 LDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLG 162
Query: 139 -PE---------------RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
PE N NA+I + K G + + +F +MP R+V+S+T+M+
Sbjct: 163 APELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVA 222
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP---------- 232
+ + ++ A L M KN VSWT +I G+ +N R EA LF +M
Sbjct: 223 AYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFT 282
Query: 233 ------------------------------DYDKNVFVVTAMITGFCKVGMLENARLLFE 262
DY N+F++ A+I +CK G + +A LF+
Sbjct: 283 FASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFK 342
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ KD VS+N++I G+AQNG EE+L +F MI+ D++P+ T + + +AC L++E
Sbjct: 343 GMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSE 402
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G L I + E + VC P + +I +
Sbjct: 403 G-----LRILDSMEKDYGVC-------------------------PRSDHYAIMIDLLGR 432
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV-YGIIP-S 440
+ E+A MGL P G + + A A +++ +MDL +V + + P +
Sbjct: 433 NNRLEEA------MGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGN 486
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGM 467
+ Y + +I + A + ++A Q+ + M
Sbjct: 487 AARYVMVYNIYAAASRWDEARQVRRLM 513
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 24/287 (8%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
H + +I L S + + NA I A + G+ + +F +M +DV++W +++ Y Q
Sbjct: 171 HGAAIIIGLNSN--IIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQAS 228
Query: 96 FLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMIS 151
L+++ LF M KN VSW +IAG N R D+A F+ M E T+ +++S
Sbjct: 229 RLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLS 288
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISY-------TAMLDGFMKKGEVDKARALSDYMSFKN 204
+ + + R I Y A++D + K G++ A L M K+
Sbjct: 289 ACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKD 348
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFE 262
+VSW +ITG+ +N E+ +F RM + D N +++ C G++ + +
Sbjct: 349 IVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILD 408
Query: 263 RIQPKDCV-----SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
++ V + MI +N EEA+ G+IK + D
Sbjct: 409 SMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAM----GLIKRAPKGSD 451
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 126/315 (40%), Gaps = 58/315 (18%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+ P S+ + C + L G+ H I+ + N +I YS+C I +
Sbjct: 10 LDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAH 69
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + N SWN II+A+++ G + +A QM P+ +++ SL+S GH G
Sbjct: 70 KVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMP----KPNLVSYNSLISGLGHHG 125
Query: 420 KVNESMDLFELMVK------------------------------VYG---IIPSSEHY-- 444
ES+++F+ M+K V+G II + +
Sbjct: 126 FRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIII 185
Query: 445 -TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
L+D + G+ + ++ I MP E D W S++AA +E +M+E
Sbjct: 186 GNALIDAYGKCGEPDISFSIFSRMP-ERDVVSWTSMVAAYAQASRLEDAHWLFSQMQE-- 242
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG----------VTKQCA-YSWIEIGNK 552
+N+ + L +A G + + M+E+G V CA + I G +
Sbjct: 243 -KNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKE 301
Query: 553 VHYFLGGDMSHPCID 567
+H G + CID
Sbjct: 302 IH---GHIIRSTCID 313
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 290/579 (50%), Gaps = 58/579 (10%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
++F +KI AL++ G+I++AR+LFD+M KD + WNA++ Y Q G Q++ LF M
Sbjct: 4 HLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMR 63
Query: 109 VKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLE 160
+ N ++ ++ C + + + + N++I + K
Sbjct: 64 IANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSAT 123
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
A R+FE+M N +S+ ++L + G D AR + D M K ++W +MI+GY +
Sbjct: 124 SARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGD 183
Query: 221 FCEARELFYRM------PD--------------------YDKNVFVV------------- 241
LF +M PD Y + F++
Sbjct: 184 VELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFES 243
Query: 242 ---------TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
AMI K+G A L+F+ K+ VS+ +MI GYA+NG E+AL F
Sbjct: 244 IGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFF 303
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M++ +QPDD T +V ACS+L L G+ H +I GF A V V N ++ MY++C
Sbjct: 304 VKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKC 363
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I S AF++I +LVSWN ++ HGH +AL + +M +G PD +TF+ LL
Sbjct: 364 GDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLL 423
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ--GMPFE 470
C H+G + + LFE MV VYG+ +EH C+VD+L R G L +A ++
Sbjct: 424 MTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTGR 483
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
A+T + +LL AC + V +G + ++ +PQ YV+LSNLY +G W++ VR
Sbjct: 484 AETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWKEAEMVR 543
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
M + GV K SWIE+ NKV F+ G+ SHP ++++
Sbjct: 544 KTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHPYMEEL 582
>gi|345505228|gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
Length = 584
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 270/472 (57%), Gaps = 12/472 (2%)
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
G +GFL+++ ++ + ++N + + GC+ R F MP+R++ +YN+M
Sbjct: 112 GMQVHGFLRKT-GIYSDLFLQNCLIGLYLKCGCLGFAR-----QVFDRMPQRDSVSYNSM 165
Query: 150 ISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNVV 206
I G++K G +E A LF+ MPR +N+IS+ M+ G+ + + V+ A L D M K+++
Sbjct: 166 IDGYVKCGLIESARELFDLMPREKKNLISWNCMISGYTQSEDGVNVASKLFDEMPEKDLI 225
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
SW +I GYVK+ R +A+ LF MP K+V MI G+ K+G + A+ LF+ +
Sbjct: 226 SWNSLIDGYVKHRRIEDAKSLFDLMPR--KDVVTWATMIDGYAKLGFVHQAKKLFDEMPQ 283
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQ 325
+D V++N+M+AGY QN EA+ +F+ M K + PD+ TLV V +A + L L++
Sbjct: 284 RDVVAYNSMMAGYVQNKYHAEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVD 343
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H+ ++ N F + A+I YS+CG I S F +I + ++ WN +I A HG
Sbjct: 344 IHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGL 403
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P +HY
Sbjct: 404 GESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYG 463
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C+VDILSR+G +E A + + MP E + +W + L AC + E GEL AK +
Sbjct: 464 CMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGY 523
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + +V+LSN+YA+ GMW++V RVR MKE+ + K SWIE+ VH F
Sbjct: 524 NPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWIELDGNVHEFF 575
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 211/412 (51%), Gaps = 50/412 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + ARQ+FD+M +D +++N++I GY + G ++ ++ LF MP
Sbjct: 128 LFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPR 187
Query: 109 -VKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
KN++SWNCMI+G + D ++ A F MPE++ ++N++I G++KH R+E+A LF
Sbjct: 188 EKKNLISWNCMISGYTQSEDGVNVASKLFDEMPEKDLISWNSLIDGYVKHRRIEDAKSLF 247
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ MPR++V+++ M+DG+ K G V +A+ L D M ++VV++ M+ GYV+N+ EA
Sbjct: 248 DLMPRKDVVTWATMIDGYAKLGFVHQAKKLFDEMPQRDVVAYNSMMAGYVQNKYHAEAIG 307
Query: 227 LFYRM-------PDYDKNVFVVT-------------------------------AMITGF 248
+F M PD V V++ A+I +
Sbjct: 308 IFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTY 367
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G ++ + +FE I+ K +NAMI G A +G+ E A + + K ++PDD T +
Sbjct: 368 SKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFI 427
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SR G I ELA I
Sbjct: 428 GVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSI---ELAKNLIEE 484
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSA 414
PN V W T + A + H +E + + L G++P LS + A
Sbjct: 485 MPIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYA 536
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 26/286 (9%)
Query: 236 KNVFVVTAMITGFC---KVGMLENARLLFERIQ------PKDCVSFNAMIAGYAQNGVAE 286
KN + T ++ F + + E AR +F +D +NA+I ++
Sbjct: 16 KNPNLTTRIVLSFSASRRSYLAEFARCIFHEYHVSSYSVEEDPFLWNAVIKSFSHGVDPR 75
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
AL LF MI+ + D ++ V ACS L ++ G Q H + + G +++ + N +I
Sbjct: 76 NALLLFCLMIENSVSVDKFSISLVLKACSRLGFVDFGMQVHGFLRKTGIYSDLFLQNCLI 135
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
+Y +CG + + F ++ + VS+N++I + + G E A F M + I
Sbjct: 136 GLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPRE--KKNLI 193
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE--HYTCLVDILSRAGQLEKAWQIT 464
++ ++S +S D + K++ +P + + L+D + ++E A +
Sbjct: 194 SWNCMISG------YTQSEDGVNVASKLFDEMPEKDLISWNSLIDGYVKHRRIEDAKSLF 247
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGEL-AAKKMRELDPQNSAV 509
MP D W A +I+ +LG + AKK+ + PQ V
Sbjct: 248 DLMP-RKDVVTW-----ATMIDGYAKLGFVHQAKKLFDEMPQRDVV 287
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 189/548 (34%), Positives = 297/548 (54%), Gaps = 19/548 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF----Q 105
VFV + IS SR G + AA +++ + KDV N +I+ Y + G +++ +F
Sbjct: 214 VFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLG 273
Query: 106 SMPVKNIVSWNCMIAGCIDNDRID-DAFDYFQAMPER-----NTATYNAMISGFLKHGRL 159
S N ++ +I+ C N ID + M + + NA++S ++KHG L
Sbjct: 274 SGLEPNDYTFTNVISAC--NGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGML 331
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-RALSDYMSFK---NVVSWTVMITGY 215
EEA + F M RN++S+TA+L G++K G KA S + + + ++ G
Sbjct: 332 EEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGC 391
Query: 216 VKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ + ++ F Y +V V TA+I + K L +ARL+F + K+ VSFN
Sbjct: 392 SECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFN 451
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
A+++GY E+A+ LFS + D++PD T + + + L +G+ H +I+
Sbjct: 452 AILSGYI-GADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKT 510
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GFEAN SV NAVITMY++CG I D+ F ++ + +SWN +I+A+A HG KALI F
Sbjct: 511 GFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILF 570
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M F PD IT LS+L AC ++G + E LF M YGI P EH+ C+VD+L R
Sbjct: 571 EEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGR 630
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
AG L +A PF +W +L+ C ++ ++ G++A+K + +L P+ + Y+++
Sbjct: 631 AGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPEEAGSYILV 690
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SNLYA GM + RVR +M + V+K+ SWIEI NKVH F+ D HP +I+ +L
Sbjct: 691 SNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVHQFVASDKDHPESKEIYAKL 750
Query: 574 KRASVQMK 581
+MK
Sbjct: 751 DLLKSEMK 758
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 199/448 (44%), Gaps = 48/448 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM- 138
D N ++ Y + L +++++F M V+N ++W +I G + + ++ F + M
Sbjct: 112 DAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMY 171
Query: 139 ---PERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVD 191
E N T + ++ L ++ + +R +V T+++ + + G++
Sbjct: 172 WVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLG 231
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------------------- 231
A + +++K+V MI+ Y K +A +F +
Sbjct: 232 AAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACN 291
Query: 232 PDYDKNVFVV-----------------TAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
D D V V A+++ + K GMLE A F + ++ VS+ A
Sbjct: 292 GDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTA 351
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+++GY +NG ++AL FS ++++ + D ++ CS + L G Q H V++ G
Sbjct: 352 LLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLG 411
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ +VSV A+I +Y++C + + L F + N+VS+N I++ + E A+ FS
Sbjct: 412 YVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIG-ADEEDAMALFS 470
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
Q+ L PD +TF LLS + + L ++K G + ++ + ++
Sbjct: 471 QLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKT-GFEANPSVGNAVITMYAKC 529
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAA 482
G + A Q+ M + D+ W ++++A
Sbjct: 530 GSIGDACQLFYSMNY-LDSISWNAVISA 556
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 4/267 (1%)
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+A F Y + F ++ + K L +A+ +F+ + ++ +++ +I G+ Q
Sbjct: 98 QAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQV 157
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
E R+ M + + ++ T + AC +L+ L G Q H VI+ GF+ +V V
Sbjct: 158 NDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVG 217
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
++I+MYSRCG + +E + + ++ N +I+ + + G EKA+ F + +G +
Sbjct: 218 TSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLE 277
Query: 403 PDGITFLSLLSACGHAGKVN-ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
P+ TF +++SAC G ++ E + + M G +V + + G LE+A
Sbjct: 278 PNDYTFTNVISACN--GDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAE 335
Query: 462 QITQGMPFEADTGVWGSLLAACVINLN 488
+ GM E + W +LL+ V N N
Sbjct: 336 KSFCGMG-ERNLVSWTALLSGYVKNGN 361
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L V V A I ++ K+ +AR +F + K+++++NAI++GY +++
Sbjct: 407 VVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYI-GADEEDA 465
Query: 101 KNLFQSMPVKNI--------------VSWNCMIAG-CIDNDRIDDAFDYFQAMPERNTAT 145
LF + + +I C++ G C+ I F E N +
Sbjct: 466 MALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGF-------EANPSV 518
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV 205
NA+I+ + K G + +A +LF M + IS+ A++ + G+ KA L + M +
Sbjct: 519 GNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEF 578
Query: 206 VSWTVMI 212
V + I
Sbjct: 579 VPDEITI 585
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 268/445 (60%), Gaps = 5/445 (1%)
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
A C +N + A+ F+ MPER+ ++N+MIS ++ G ++ A L ++MP RN++++ +
Sbjct: 120 ANCSEN--LGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNS 177
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
++ G K G ++ A ++ + M +N VSW MI+GYV+ A+ +FY+MP+ K V
Sbjct: 178 VVCGLSKAGNMELAHSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMPE--KTVV 235
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKM 298
TAMI+G+ G L++A +F + K+ VS+NAMI+GY N ++AL +F M I
Sbjct: 236 SWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLING 295
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ +PD TL+S+ +AC+ L L G+ + + +N ++ + NA+I M+++CG + ++
Sbjct: 296 ECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENA 355
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+ F + +++W T+++ A +G +A+ F +M L G PD + F+++LSAC H
Sbjct: 356 KEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHG 415
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E +F+ MV+ +GI P EHY C+VD+L RAG+LE+A + T M + + +W +
Sbjct: 416 GLVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVRFTARMHLKPNAVIWAT 475
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL C I+ N +L + +K+ + +P N + ++SNL A+ G W DV R+ M++Q +
Sbjct: 476 LLFCCKIHGNGDLLKSVTEKIMDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRM 535
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSH 563
K S I++GN+VH FL D H
Sbjct: 536 EKVPGCSSIQVGNRVHEFLAKDTRH 560
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 211/414 (50%), Gaps = 43/414 (10%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGK-ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
+++L VFV N+ + + + + +A ++F++M +DVI+WN++I+ Y G +Q
Sbjct: 100 ILKLGFGSSVFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQS 159
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+ L MP +NIV+WN ++ G ++ A F+ MP RN ++N+MISG+++ G +
Sbjct: 160 AIGLLDKMPERNIVTWNSVVCGLSKAGNMELAHSVFEQMPLRNEVSWNSMISGYVRIGDV 219
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
A +F QMP + V+S+TAM+ G+ G++ A + ++M KNVVSW MI+GYV N
Sbjct: 220 RAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNH 279
Query: 220 RFCEARELFYRM-------PDYDKNVFVVT------------------------------ 242
F +A +F+ M PD + +++
Sbjct: 280 EFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLG 339
Query: 243 -AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
A+I F K G +ENA+ +F + + +++ M++G A NG EA+ LF M +
Sbjct: 340 NALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTK 399
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSEL 360
PDD ++V +AC+ L+ EG++ +++ G + + ++ + R G + ++
Sbjct: 400 PDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVR 459
Query: 361 AFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
++H PN V W T++ HG+ + L+ + +P ++L+L+S
Sbjct: 460 FTARMHLKPNAVIWATLLFCCKIHGNGD--LLKSVTEKIMDQEPSNPSYLTLVS 511
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+EALR++S M + ++ + T + Q L +GR H +++ GF ++V V N++
Sbjct: 56 KEALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSL 115
Query: 346 ITMYSRCGGILDSEL-AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+ Y+ C L S F ++ +++SWN++I+A+ G + A+ +M + +
Sbjct: 116 LGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMP----ERN 171
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+T+ S++ AG + + +FE M + + + ++ R G + A I
Sbjct: 172 IVTWNSVVCGLSKAGNMELAHSVFEQMP-----LRNEVSWNSMISGYVRIGDVRAAQSIF 226
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGE 493
MP E W ++++ N +++ E
Sbjct: 227 YQMP-EKTVVSWTAMISGYATNGDLKSAE 254
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 289/570 (50%), Gaps = 59/570 (10%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
++ + I SR G + AA+++FD+M + DV+ + ++I+ + +NG + + M
Sbjct: 77 WIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQM--- 133
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+ G N+ A P + G HG L + L Q
Sbjct: 134 -------LKQGLKPNEHTMTTI--LTACPR---------VLGQQIHGYLIKKIGLRSQ-- 173
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
+V S TA++D + + GE A+A+ D + KNVVSW M+ Y+++ R EA ++F
Sbjct: 174 --SVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGD 231
Query: 231 M--PDYDKNVF--------------------------------VVTAMITGFCKVGMLEN 256
M D N F V A+++ + + G++E
Sbjct: 232 MISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEE 291
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
+ +I+ D VS+ I+ QNG E+A+ L M P+ SV ++C+
Sbjct: 292 LEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCAD 351
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
+ L++G Q H L ++ G ++ + NA+I MYS+CG + + LAF +H+ ++ SWN++
Sbjct: 352 VASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSL 411
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I AQHG KAL FS+M NG PD TFL +L C H+G V E F LM+ Y
Sbjct: 412 IHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYS 471
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
P+ HY C++D+L R G+ ++A ++ MPFE D +W +LLA+C ++ N+++G+LAA
Sbjct: 472 FTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAA 531
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
++ EL ++SA YV++SN+YA G W D +VR M E GV K SWIEI N+VH F
Sbjct: 532 DRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTF 591
Query: 557 LGGDMSHPCIDKIHLELKRASVQMKSVDDF 586
DMSHP D I+ L M+ D+
Sbjct: 592 ASRDMSHPNSDSIYQMLGELVAVMQDFDEL 621
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 192/417 (46%), Gaps = 48/417 (11%)
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEEA 162
MP KN+V+W +++G N R + A F M E A NA + G L
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 163 TRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
++ R + +++ + + G + A+ + D M +VV +T +I+ + +N
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 219 ERFCEARELFYRM------PD-----------------------------YDKNVFVVTA 243
F A E +M P+ ++V+ TA
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTA 180
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+I + + G + A+ +F+ + K+ VS+ +M+ Y ++G EEAL++F MI + P+
Sbjct: 181 LIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPN 240
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
+ L V AC ++ L GRQ H I++ ++ V NA+++MY R G + + E
Sbjct: 241 EFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLN 297
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+I +P+LVSW T I+A Q+G EKA+ QM GF P+G F S+LS+C +++
Sbjct: 298 KIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQ 357
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
M L +K+ G L+++ S+ GQ+ A ++ + D W SL+
Sbjct: 358 GMQFHCLALKL-GCDSEICTGNALINMYSKCGQMGSA-RLAFDVMHTHDVTSWNSLI 412
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 225/503 (44%), Gaps = 92/503 (18%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
+Q V+ + A I SR G+ A+ +FD + K+V++W +++ Y ++G L+E+ +F
Sbjct: 172 SQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGD 231
Query: 107 MPVK----NIVSWNCMIAGC-------------IDNDRIDDAFDYFQAMPERNTATYNAM 149
M + N + + ++ C I +D I D NA+
Sbjct: 232 MISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITD------------IRVSNAL 279
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM--------- 200
+S + + G +EE + ++ +++S+T + + G +KA AL M
Sbjct: 280 LSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNG 339
Query: 201 -SFKNVVSWTVMITGYVKNERF-CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
+F +V+S + + +F C A +L D + A+I + K G + +AR
Sbjct: 340 YAFSSVLSSCADVASLDQGMQFHCLALKL-----GCDSEICTGNALINMYSKCGQMGSAR 394
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
L F+ + D S+N++I G+AQ+G A +AL +FS M ++PDD+T + V C+
Sbjct: 395 LAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSG 454
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
++ EG L R +I YS +P + +I
Sbjct: 455 MVEEGE----LFFR-----------LMIDQYS---------------FTPAPSHYACMID 484
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
++G +++AL + M F+PD + + +LL++C K++ ++D+ +L +
Sbjct: 485 MLGRNGRFDEALRMINDM---PFEPDALIWKTLLASC----KLHRNLDIGKLAADRLMEL 537
Query: 439 P--SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV-INLNVELGELA 495
S Y + +I + G+ E A ++ + M +TGV A C I +N E+ A
Sbjct: 538 SDRDSASYVLMSNIYAMHGEWEDARKVRRRMD---ETGVKKD--AGCSWIEINNEVHTFA 592
Query: 496 AKKMRELDPQNSAVYVMLSNLYA 518
++ M P + ++Y ML L A
Sbjct: 593 SRDMSH--PNSDSIYQMLGELVA 613
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 39 NCL-IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CL ++L + NA I+ S+ G++ +AR FD M T DV +WN++I G+ Q+G
Sbjct: 362 HCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDA 421
Query: 98 QESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNA 148
++ +F M I ++ ++ GC + +++ +F+ M ++ + T Y
Sbjct: 422 NKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC 481
Query: 149 MISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDY---MSFKN 204
MI ++GR +EA R+ MP + + + +L +D + +D +S ++
Sbjct: 482 MIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRD 541
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPD 233
S+ +M Y + + +AR++ RM +
Sbjct: 542 SASYVLMSNIYAMHGEWEDARKVRRRMDE 570
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 276/506 (54%), Gaps = 42/506 (8%)
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV- 174
N I+ +R+D A + M N YNAMI GF++ + +A L+ QM R NV
Sbjct: 18 NQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVS 77
Query: 175 -ISYT-------------------------------------AMLDGFMKKGEVDKARAL 196
SYT +++D + G ++++ +
Sbjct: 78 PTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRV 137
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
D M ++V +WT M++G V+ A LF MPD +N+ +I G+ ++ ++
Sbjct: 138 FDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPD--RNLATWNTLIDGYARLREVDV 195
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A LLF ++ +D +S+ MI Y+QN EAL +F+ M K + PD+ T+ +V +AC+
Sbjct: 196 AELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAH 255
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L+ G++ H ++++GF +V + +A+I MY++CG + S L F ++ NL WN++
Sbjct: 256 LGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSV 315
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I A HG+ E+AL F +M P+G+TF+S+LSAC HAG + E F M + +
Sbjct: 316 IEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHS 375
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
I P EHY C+VD+LS+AG LE+A Q+ + M E + +WG+LL+ C ++ N+E+ ++AA
Sbjct: 376 IPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAA 435
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC-AYSWIEIGNKVHY 555
K+ L+P NS Y +L N+ A W + ++RL MKEQGV K+C SWIE+ ++VH
Sbjct: 436 NKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWIEMESQVHQ 495
Query: 556 FLGGDMSHPCIDKIHLELKRASVQMK 581
F D SH D+I+ L QMK
Sbjct: 496 FAASDKSHAASDEIYSLLAELDGQMK 521
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 184/390 (47%), Gaps = 44/390 (11%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
+VFV + + S G+I + ++FD+M +DV W +++G + G + + LF MP
Sbjct: 114 HVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMP 173
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
+N+ +WN +I G +D A F MP R+ ++ MI+ + ++ R EA +F +
Sbjct: 174 DRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNE 233
Query: 169 MPRRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
M + + ++ ++ G +D + + Y +M G
Sbjct: 234 MAKHGISPDEVTMATVISACAHLGALDLGKEIHYY----------IMQHG---------- 273
Query: 225 RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
++ +V++ +A+I + K G L+ + L+F +++ K+ +N++I G A +G
Sbjct: 274 ---------FNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGY 324
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCN 343
AEEAL +F M + ++P+ T VSV +AC+ L+ EGR+ + R+ V
Sbjct: 325 AEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYG 384
Query: 344 AVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
++ + S+ G + ++ R + PN V W +++ H + E A + +++ + +
Sbjct: 385 CMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMV--LE 442
Query: 403 PDGITFLSLL-------SACGHAGKVNESM 425
P + +LL + G A K+ +M
Sbjct: 443 PGNSGYYTLLVNMNAEVNRWGEAAKIRLTM 472
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/581 (31%), Positives = 316/581 (54%), Gaps = 18/581 (3%)
Query: 7 FHQTYLK--RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAG 64
H YLK +P +L+ S G ++ + F+ V +++A + ++
Sbjct: 97 LHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSA-VGMYAKCN 155
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIA 120
A +LFD+M +DV +WN +I+ Y+Q+G +++ LF+ M V V+ +I+
Sbjct: 156 VFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVIS 215
Query: 121 GC---IDNDRIDDA-FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
C +D +R + + ++ + +A++ + K G LE A +FEQ+ R+NV+S
Sbjct: 216 SCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVS 275
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVKNERFCEARELFYR 230
+ +M+ G+ KG+ L M + + +S +M N + + +
Sbjct: 276 WNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYII 335
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+ ++FV +++I + K G + +A +F+ + + VS+N MI+GY + G EAL
Sbjct: 336 RNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALV 395
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
+F+ M K ++PD T SV ACS L +L +G++ H +I + E N V A++ MY+
Sbjct: 396 IFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYA 455
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG + ++ F Q+ + VSW ++IAA+ HG +AL F +M + PD +TFL+
Sbjct: 456 KCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 515
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP-F 469
+LSAC HAG V+E F M+ YG P+ EHY+CL+D+L R G+L +A++I Q P
Sbjct: 516 ILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDI 575
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
D G+ +L +AC ++ ++LGE + + E DP + + Y++LSN+YA+ W +V +V
Sbjct: 576 REDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKV 635
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
RL +KE G+ K SWIE+G ++H F+ D SHP D I+
Sbjct: 636 RLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIY 676
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 152/325 (46%), Gaps = 52/325 (16%)
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRM-------PD------------------YDK-- 236
++ W ++ KN F E E+F+R+ PD Y K
Sbjct: 69 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128
Query: 237 -----------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+V V+++ + + K + E+A LF+ + +D S+N +I+ Y Q+G
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 188
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
E+AL LF M +PD TL +V ++C+ L L G++ H+ ++R+GF + V +A+
Sbjct: 189 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 248
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY +CG + ++ F QI N+VSWN++IA ++ G + + F +M G P
Sbjct: 249 VDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTL 308
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY------TCLVDILSRAGQLEK 459
T S+L AC + VN + F ++G I + + L+D+ + G +
Sbjct: 309 TTLSSILMACSRS--VNLQLGKF-----IHGYIIRNRVEADIFVNSSLIDLYFKCGNIGS 361
Query: 460 AWQITQGMPFEADTGVWGSLLAACV 484
A + Q MP + + W +++ V
Sbjct: 362 AENVFQNMP-KTNVVSWNVMISGYV 385
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 271/450 (60%), Gaps = 6/450 (1%)
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS--- 201
T N +I+ + K G ++ A ++F++MP R+++S+ M+ + GE ++A L M
Sbjct: 101 TSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREG 160
Query: 202 --FKNVVSWTVMITGYVKNE-RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
F +V+ K C+ F D NVFV TA++ + K G++++A
Sbjct: 161 TPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAV 220
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+FE + + V++++M AGY QN + E+AL LF + ++ D + SV AC+ L
Sbjct: 221 CVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLA 280
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
+ EG+Q + L+ ++GF +N+ V +++I MY++CGGI +S FR + N+V WN +I+
Sbjct: 281 AMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMIS 340
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
++H + +I F +M G P+ +TF+S+LSACGH G V + F+LM K + +
Sbjct: 341 GLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLA 400
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
P+ HY+C+VD LSRAGQ+ +A+ + +PF A +WGSLLA+C + N+EL E+AAKK
Sbjct: 401 PNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKK 460
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ +++P NS Y++LSN+YAA G W +V ++R L+KE V K+ SWIEI +KVH F+
Sbjct: 461 LFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMV 520
Query: 559 GDMSHPCIDKIHLELKRASVQMKSVDDFVE 588
G+ +HP I +I+ +L +++ + VE
Sbjct: 521 GERNHPKIVEIYSKLNEVMDELQKLGYKVE 550
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 183/411 (44%), Gaps = 58/411 (14%)
Query: 37 SSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ----------MTTK-DVITWN 85
SS+C++ N +S + K+ A R+L Q M K D++T N
Sbjct: 44 SSSCIVECEKPTTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSN 103
Query: 86 AIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT 145
+I Y + G + ++ +F MP +++VSWN MI N ++A D M T
Sbjct: 104 ILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPF 163
Query: 146 YNAMISGFL----KHGRLEEATRL----FEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
IS L L E L + NV TA+LD + K G + A +
Sbjct: 164 SEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVF 223
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------------------------- 231
+ M ++VV+W+ M GYV+NE + +A LF +
Sbjct: 224 ESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMI 283
Query: 232 -----------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
+ N+FV +++I + K G +E + +F ++ ++ V +NAMI+G +
Sbjct: 284 EGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLS 343
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA-NV 339
++ + E + LF M +M + P+D T VSV +AC + L+ +G++ L+ + A NV
Sbjct: 344 RHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNV 403
Query: 340 SVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ ++ SR G I ++ +L + + + W +++A+ HG+ E A
Sbjct: 404 FHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA 454
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 7/223 (3%)
Query: 304 DATLVS----VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+AT VS + C+ +LL +G+ H ++ G + ++ N +I MYS+CG + +
Sbjct: 60 NATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFAR 119
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F ++ S +LVSWNT+I + Q+G +AL QM G T S+L AC
Sbjct: 120 QVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKC 179
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
++E L +K + + T L+D+ ++ G ++ A + + MP + W S+
Sbjct: 180 ALSECQLLHAFAIKA-AMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSM 237
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
A V N E +K E ++ ++M S + A AG+
Sbjct: 238 AAGYVQNEMYEQALALFRKAWETGLKHDQ-FLMSSVICACAGL 279
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/581 (31%), Positives = 316/581 (54%), Gaps = 18/581 (3%)
Query: 7 FHQTYLK--RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAG 64
H YLK +P +L+ S G ++ + F+ V +++A + ++
Sbjct: 289 LHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSA-VGMYAKCN 347
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIA 120
A +LFD+M +DV +WN +I+ Y+Q+G +++ LF+ M V V+ +I+
Sbjct: 348 VFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVIS 407
Query: 121 GC---IDNDRIDDA-FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
C +D +R + + ++ + +A++ + K G LE A +FEQ+ R+NV+S
Sbjct: 408 SCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVS 467
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVKNERFCEARELFYR 230
+ +M+ G+ KG+ L M + + +S +M N + + +
Sbjct: 468 WNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYII 527
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+ ++FV +++I + K G + +A +F+ + + VS+N MI+GY + G EAL
Sbjct: 528 RNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALV 587
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
+F+ M K ++PD T SV ACS L +L +G++ H +I + E N V A++ MY+
Sbjct: 588 IFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYA 647
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG + ++ F Q+ + VSW ++IAA+ HG +AL F +M + PD +TFL+
Sbjct: 648 KCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 707
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP-F 469
+LSAC HAG V+E F M+ YG P+ EHY+CL+D+L R G+L +A++I Q P
Sbjct: 708 ILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDI 767
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
D G+ +L +AC ++ ++LGE + + E DP + + Y++LSN+YA+ W +V +V
Sbjct: 768 REDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKV 827
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
RL +KE G+ K SWIE+G ++H F+ D SHP D I+
Sbjct: 828 RLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIY 868
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 152/325 (46%), Gaps = 52/325 (16%)
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRM-------PD------------------YDK-- 236
++ W ++ KN F E E+F+R+ PD Y K
Sbjct: 261 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 320
Query: 237 -----------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+V V+++ + + K + E+A LF+ + +D S+N +I+ Y Q+G
Sbjct: 321 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 380
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
E+AL LF M +PD TL +V ++C+ L L G++ H+ ++R+GF + V +A+
Sbjct: 381 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 440
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY +CG + ++ F QI N+VSWN++IA ++ G + + F +M G P
Sbjct: 441 VDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTL 500
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY------TCLVDILSRAGQLEK 459
T S+L AC + VN + F ++G I + + L+D+ + G +
Sbjct: 501 TTLSSILMACSRS--VNLQLGKF-----IHGYIIRNRVEADIFVNSSLIDLYFKCGNIGS 553
Query: 460 AWQITQGMPFEADTGVWGSLLAACV 484
A + Q MP + + W +++ V
Sbjct: 554 AENVFQNMP-KTNVVSWNVMISGYV 577
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 271/450 (60%), Gaps = 6/450 (1%)
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS--- 201
T N +I+ + K G ++ A ++F++MP R+++S+ M+ + GE ++A L M
Sbjct: 101 TSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREG 160
Query: 202 --FKNVVSWTVMITGYVKNE-RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
F +V+ K C+ F D NVFV TA++ + K G++++A
Sbjct: 161 TPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAV 220
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+FE + + V++++M AGY QN + E+AL LF + ++ D + SV AC+ L
Sbjct: 221 CVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLA 280
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
+ EG+Q + L+ ++GF +N+ V +++I MY++CGGI +S FR + N+V WN +I+
Sbjct: 281 AMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMIS 340
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
++H + +I F +M G P+ +TF+S+LSACGH G V + F+LM K + +
Sbjct: 341 GLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLA 400
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
P+ HY+C+VD LSRAGQ+ +A+ + +PF A +WGSLLA+C + N+EL E+AAKK
Sbjct: 401 PNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKK 460
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ +++P NS Y++LSN+YAA G W +V ++R L+KE V K+ SWIEI +KVH F+
Sbjct: 461 LFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMV 520
Query: 559 GDMSHPCIDKIHLELKRASVQMKSVDDFVE 588
G+ +HP I +I+ +L +++ + VE
Sbjct: 521 GERNHPKIVEIYSKLNEVMDELQKLGYKVE 550
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 183/411 (44%), Gaps = 58/411 (14%)
Query: 37 SSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ----------MTTK-DVITWN 85
SS+C++ N +S + K+ A R+L Q M K D++T N
Sbjct: 44 SSSCIVECEKPTTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSN 103
Query: 86 AIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT 145
+I Y + G + ++ +F MP +++VSWN MI N ++A D M T
Sbjct: 104 ILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPF 163
Query: 146 YNAMISGFL----KHGRLEEATRL----FEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
IS L L E L + NV TA+LD + K G + A +
Sbjct: 164 SEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVF 223
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------------------------- 231
+ M ++VV+W+ M GYV+NE + +A LF +
Sbjct: 224 ESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMI 283
Query: 232 -----------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
+ N+FV +++I + K G +E + +F ++ ++ V +NAMI+G +
Sbjct: 284 EGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLS 343
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA-NV 339
++ + E + LF M +M + P+D T VSV +AC + L+ +G++ L+ + A NV
Sbjct: 344 RHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNV 403
Query: 340 SVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ ++ SR G I ++ +L + + + W +++A+ HG+ E A
Sbjct: 404 FHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA 454
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 7/223 (3%)
Query: 304 DATLVS----VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+AT VS + C+ +LL +G+ H ++ G + ++ N +I MYS+CG + +
Sbjct: 60 NATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFAR 119
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F ++ S +LVSWNT+I + Q+G +AL QM G T S+L AC
Sbjct: 120 QVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKC 179
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
++E L +K + + T L+D+ ++ G ++ A + + MP + W S+
Sbjct: 180 ALSECQLLHAFAIKA-AMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSM 237
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
A V N E +K E ++ ++M S + A AG+
Sbjct: 238 AAGYVQNEMYEQALALFRKAWETGLKHDQ-FLMSSVICACAGL 279
>gi|345505204|gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
Length = 587
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 266/473 (56%), Gaps = 23/473 (4%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA 148
TG W + FLQ NC+I + + A F MP+R++ +YN+
Sbjct: 128 TGIWSDLFLQ-----------------NCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNS 170
Query: 149 MISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNV 205
MI G++K G + A LF+ MP+ +N+IS+ +M+ G+ + + V+ A L M K++
Sbjct: 171 MIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDL 230
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+SW +I GYVK+ R +A++LFY MP D V MI G+ K+G + A+ LF+++
Sbjct: 231 ISWNSLIDGYVKHGRMEDAKDLFYVMPRRD--VVTWATMIDGYAKLGFVHKAKTLFDQMP 288
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGR 324
+D V++N+M+AGY QN EAL +F+ M K + PD+ TLV V +A + L L++
Sbjct: 289 HRDVVAYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAM 348
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
+ ++ F + A+I M+S+CG I + F I + ++ WN +I A HG
Sbjct: 349 SMNKYIVEKSFPLGGKLGVALIDMHSKCGSIQQAISVFEGIKNKSIDHWNAMIGGLAIHG 408
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
H E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P +HY
Sbjct: 409 HGELAFDMLMQIERCSIKPDDITFIGVLNACSHSGLVKEGLLSFELMRRKHKIEPRLQHY 468
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+VDILSR+G +E A + + MP E + +W + L AC E+GEL AK +
Sbjct: 469 GCIVDILSRSGSIELAKHLIEDMPMEPNDVIWRTFLIACRNRKEFEIGELVAKHLILQAG 528
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ GMW+DV RVR++MK++ + K SWIE+ VH F
Sbjct: 529 YNPSSYVLLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWIELDGNVHEFF 581
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 208/412 (50%), Gaps = 50/412 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + ARQ+FD+M +D +++N++I GY + G + ++ LF MP
Sbjct: 134 LFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPK 193
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+KN++SWN MI+G +D ++ A F MPE++ ++N++I G++KHGR+E+A LF
Sbjct: 194 EMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLF 253
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
MPRR+V+++ M+DG+ K G V KA+ L D M ++VV++ M+ GYV+N+ EA E
Sbjct: 254 YVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALE 313
Query: 227 LFYRM-------PDYDKNVFVVT-------------------------------AMITGF 248
+F M PD V V++ A+I
Sbjct: 314 IFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMNKYIVEKSFPLGGKLGVALIDMH 373
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G ++ A +FE I+ K +NAMI G A +G E A + + + ++PDD T +
Sbjct: 374 SKCGSIQQAISVFEGIKNKSIDHWNAMIGGLAIHGHGELAFDMLMQIERCSIKPDDITFI 433
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG S L+ R + E + ++ + SR G I ELA I
Sbjct: 434 GVLNACSHSGLVKEGLLSFELMRRKHKIEPRLQHYGCIVDILSRSGSI---ELAKHLIED 490
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSA 414
PN V W T + A +E + + L G++P LS + A
Sbjct: 491 MPMEPNDVIWRTFLIACRNRKEFEIGELVAKHLILQAGYNPSSYVLLSNMYA 542
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F R ++F+ +I + K G L AR +F+R+ +D VS+N+MI GY + G+
Sbjct: 124 FLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGS 183
Query: 288 ALRLFSGMIKMDMQPDD-ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
A LF D+ P + L+S + S ++G + E ++ N++I
Sbjct: 184 ARELF------DLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLI 237
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
Y + G + D++ F + ++V+W T+I +A+ G KA F QM D +
Sbjct: 238 DGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMP----HRDVV 293
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA-----W 461
+ S+++ E++++F M K + P ++ +++ G+L KA +
Sbjct: 294 AYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMNKY 353
Query: 462 QITQGMPFEADTGV 475
+ + P GV
Sbjct: 354 IVEKSFPLGGKLGV 367
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 127/291 (43%), Gaps = 47/291 (16%)
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F + +D +NA+I ++ + AL F M++ + D +L V ACS L +
Sbjct: 56 FAHGEVEDPFLWNAVIKSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFV 115
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG---------------------GILDSE 359
EG Q H + + G +++ + N +I +Y +CG ++D
Sbjct: 116 QEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGY 175
Query: 360 LAFRQIHS------------PNLVSWNTIIAAFAQHGH-YEKALIFFSQMGLNGFDPDGI 406
+ I S NL+SWN++I+ +AQ A F++M + D I
Sbjct: 176 VKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMP----EKDLI 231
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
++ SL+ G++ ++ DLF +M + + + ++D ++ G + KA +
Sbjct: 232 SWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVT-----WATMIDGYAKLGFVHKAKTLFDQ 286
Query: 467 MPFEADTGVWGSLLAACVIN-LNVELGEL--AAKKMRELDPQNSAVYVMLS 514
MP D + S++A V N ++E E+ +K L P + + ++LS
Sbjct: 287 MPHR-DVVAYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLS 336
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 299/543 (55%), Gaps = 28/543 (5%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G + +A ++F++M ++ +TW +IT Q G+ E+ +LF M ++G I
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVI 278
Query: 124 D---NDRIDDAFDYFQAMPERNTATYN-----AMISGFLK---HGRLEEATRLFEQMPRR 172
N + + R+ T + +I+ + K G + A ++F+Q+
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338
Query: 173 NVISYTAMLDGFMKKGEVDK-----------ARALSDYMSFKNVVSWTVMITGYVKNER- 220
NV S+TAM+ G+++KG D+ + ++ +F + + + E+
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
F A +L + + V ++I+ + + G +++AR F+ + K+ +S+N +I YA
Sbjct: 399 FTHAVKLGFSSVNC-----VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYA 453
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
+N +EEAL LF+ + M T S+ + +++ + +G Q H VI++G + N S
Sbjct: 454 KNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
VCNA+I+MYSRCG I + F + N++SW +II FA+HG +AL F +M G
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEG 573
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
P+ +T++++LSAC H G VNE F+ M +G+IP EHY C+VDIL R+G L +A
Sbjct: 574 VRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEA 633
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
Q MP++AD VW + L AC ++ N+ELG+ AAK + E +P + A Y++LSNLYA+
Sbjct: 634 IQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASI 693
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
W +V+ +R MKE+ + K+ SW+E+ NKVH F GD SHP +I+ EL+ SV++
Sbjct: 694 SKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKI 753
Query: 581 KSV 583
K +
Sbjct: 754 KKL 756
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 183/380 (48%), Gaps = 39/380 (10%)
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQM-PRRNVISYTAMLDGFMKKGEVDKAR 194
Q+ + ++ T N++IS + K G+ E+AT +F M R++IS++AM+ F
Sbjct: 94 QSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFA--------- 144
Query: 195 ALSDYMSFKNVVSWTVMI-TGYVKNE-------RFCEARELFYRMPD-----------YD 235
++ M F+ ++++ MI GY NE R C E F + D
Sbjct: 145 --NNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAE-FVSVGDSIFGFVIKTGYLQ 201
Query: 236 KNVFVVTAMITGFCK-VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+V V +I F K G L +A +FE++ ++ V++ MI Q G A EA+ LF
Sbjct: 202 SDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLD 261
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC-- 352
MI +PD TL V +AC+ ++LL G+Q H IR+G + V +I MY++C
Sbjct: 262 MIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV 321
Query: 353 -GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY-EKALIFFSQMGLNGFDPDGITFLS 410
G + + F QI N+ SW +I + Q G Y E+AL F M L P+ TF S
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
L AC + + +F VK+ G + L+ + +R+G+++ A + + FE
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKL-GFSSVNCVANSLISMYARSGRIDDARKAFD-ILFE 439
Query: 471 ADTGVWGSLLAACVINLNVE 490
+ + +++ A NLN E
Sbjct: 440 KNLISYNTVIDAYAKNLNSE 459
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N+ IS +R+G+I AR+ FD + K++I++N +I Y +N +E+ LF + +
Sbjct: 413 VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQG 472
Query: 112 I----VSWNCMIAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEEAT 163
+ ++ +++G I ++ + N + NA+IS + + G +E A
Sbjct: 473 MGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAF 532
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
++FE M RNVIS+T+++ GF K G +A L
Sbjct: 533 QVFEDMEDRNVISWTSIITGFAKHGFATQALEL 565
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG +A+ M+ PD T C + + G H + ++ + +
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
N++I++YS+CG + FR + S +L+SW+ +++ FA + +AL+ F M NG
Sbjct: 104 LNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC-LVDILSRA-GQLE 458
+ P+ F + AC A V+ +F ++K G + S C L+D+ + G L
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKT-GYLQSDVCVGCGLIDMFVKGRGDLV 222
Query: 459 KAWQITQGMPFEADTGVW 476
A+++ + MP E + W
Sbjct: 223 SAFKVFEKMP-ERNAVTW 239
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK- 110
V NA IS SR G I +A Q+F+ M ++VI+W +IITG+ ++GF ++ LF M +
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEG 573
Query: 111 ---NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
N V++ +++ C +++ + +F++M + Y ++ + G L EA
Sbjct: 574 VRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEA 633
Query: 163 TRLFEQMPRR 172
+ MP +
Sbjct: 634 IQFINSMPYK 643
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 300/576 (52%), Gaps = 53/576 (9%)
Query: 58 SALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG-----------FLQESKNL--- 103
+ALS + A+Q+FDQ+ ++ TWN +I Y + L +S +
Sbjct: 77 AALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDK 136
Query: 104 ---------------------FQSMPVK-----NIVSWNCMIAGCIDNDRIDDAFDYFQA 137
F M +K ++ N +I + + F
Sbjct: 137 FTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVN 196
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKA 193
+P R+ ++N+MI+ F++ G EEA LF++M +NV I+ +L KK + +
Sbjct: 197 IPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG 256
Query: 194 RALSDYMSFKNVVSWTV-----MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGF 248
R + Y+ +N + ++ M+ Y K +A+ LF +MP+ K++ T M+ G+
Sbjct: 257 RWVHSYIE-RNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPE--KDIVSWTTMLVGY 313
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATL 307
K+G + A+ +F+ + +D ++NA+I+ Y Q G +EAL LF + + +PD+ TL
Sbjct: 314 AKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTL 373
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
VS +AC+ L ++ G HV + + G + N + ++I MY +CG + + + F +
Sbjct: 374 VSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVER 433
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
++ W+ +IA A HGH + A+ FS+M + P+ +TF ++L AC H G V E
Sbjct: 434 KDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTF 493
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
F M VYG++P +HY C+VDIL RAG LE+A ++ + MP VWG+LL AC I+
Sbjct: 494 FNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHE 553
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
NV L E A ++ EL+P N YV+LSN+YA AG W V+ +R LM++ G+ K+ S I
Sbjct: 554 NVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSI 613
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
E+ VH FL GD SHP KI+ +L +++++
Sbjct: 614 EVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETI 649
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 191/391 (48%), Gaps = 48/391 (12%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I++ VF+ N+ I ++ G++ ++F + +DV++WN++IT + Q G +E+
Sbjct: 162 VIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEA 221
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDY---FQAMPERNT-----ATYNAMISG 152
LFQ M +N+ + G + F++ + ERN NAM+
Sbjct: 222 LELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDM 281
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+ K G +E+A RLF++MP ++++S+T ML G+ K GE D A+ + D M +++ +W +I
Sbjct: 282 YTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALI 341
Query: 213 TGYVKNERFCEARELFYRM-------PD-------------------------YDK---- 236
+ Y + + EA ELF+ + PD Y K
Sbjct: 342 SAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGM 401
Query: 237 --NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
N + T++I +CK G L+ A ++F ++ KD ++AMIAG A +G ++A+ LFS
Sbjct: 402 KLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSK 461
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + ++P+ T ++ ACS + L+ EGR + + + G V ++ + R G
Sbjct: 462 MQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAG 521
Query: 354 GILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
+ ++ EL + +P W ++ A H
Sbjct: 522 LLEEAVELIEKMPMAPAASVWGALLGACTIH 552
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/577 (31%), Positives = 294/577 (50%), Gaps = 79/577 (13%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP---ER 141
NA++T Y + G + ++K +FQS+ ++ SWN +I + A F+ M +
Sbjct: 146 NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKP 205
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALS 197
N+ TY +ISGF L E ++ ++ +++ TA+++ + K G +AR +
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVF 265
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------------------------- 232
D M +++VSW VMI YV+N F EA EL+ ++
Sbjct: 266 DKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALA 325
Query: 233 ------------DYDKNVFVVTAMITGFCKVGMLE------------------------- 255
D V V TA++ + K G LE
Sbjct: 326 QGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYA 385
Query: 256 ---------NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDA 305
AR +F+R+ +D + +NAMI Y QNG A A+++F M ++PD
Sbjct: 386 SNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAV 445
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T ++V AC++L L+E + H + + E+NV V N +I MY+RCG + ++E F
Sbjct: 446 TFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAA 505
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+VSW ++AAF+Q+G Y +AL F +M L G PD +T+ S+L C H G + +
Sbjct: 506 KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGW 565
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
F M +++G+ P+++H+ +VD+L R+G+L A ++ + MPFE D W + L AC I
Sbjct: 566 RYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRI 625
Query: 486 NLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYS 545
+ +ELGE AA+++ ELDP ++A Y+ +SN+YAA GMW V VR M+E+G+ K S
Sbjct: 626 HGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLS 685
Query: 546 WIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
+IE+ K+H F G HP D+I EL R M++
Sbjct: 686 FIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRA 722
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/527 (25%), Positives = 247/527 (46%), Gaps = 83/527 (15%)
Query: 21 LRILSTPDSCGNFTPHSSNCLIRLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMT 77
L +L + SCG+ + R+ +++ V NA IS + + AR +F+ M
Sbjct: 11 LTVLCSCSSCGDVAEGRA-LHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMD 69
Query: 78 --TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGC--------I 123
++V++WNA+I Y QNG E+ L+ M ++ + V++ ++ C I
Sbjct: 70 WRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGREI 129
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
N D FQ++ NA+++ + + G + +A R+F+ + R+ S+ A++
Sbjct: 130 HNRVFYSGLDSFQSLA-------NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182
Query: 184 FMKKGEVDKARALSDYMSFK-----NVVSWTVMITGYVKNERFCEARELFYRM--PDYDK 236
+ G D + AL + K N ++ +I+G+ E E R++ + +D
Sbjct: 183 HSQSG--DWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDS 240
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
++ V TA+I + K G AR +F++++ +D VS+N MI Y QNG EAL L+ +
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLD 300
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ AT VS+ ACS+++ L +GR H ++ G ++ V+V A++ MY++CG +
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL-------------------------- 390
++ F + + + V+W+T+I A+A +G+ + A
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQ 420
Query: 391 ---------IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
IF G G PD +TF+++L AC G+++E L + I S
Sbjct: 421 NGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKAL-------HAQISES 473
Query: 442 EHYT------CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
E + L+++ +R G LE+A ++ E W +++AA
Sbjct: 474 ELESNVVVTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAA 519
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 185/352 (52%), Gaps = 8/352 (2%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMP--RRNVISYTAMLDGFMKKGEVDKARALS 197
ER+T NA+IS + K L +A +FE M +RNV+S+ AM+ + + G +A L
Sbjct: 39 ERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLY 98
Query: 198 DYMSFKNVVSWTVMITGYVKN-ERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGML 254
M+ + + + V + + RE+ R+ D + A++T + + G +
Sbjct: 99 WRMNLQGLGTDHVTFVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSV 158
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+A+ +F+ +Q +D S+NA+I ++Q+G ALR+F M K DM+P+ T ++V +
Sbjct: 159 GDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGF 217
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
S ++L EGR+ H ++ NGF++++ V A+I MY +CG ++ F ++ ++VSWN
Sbjct: 218 STPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWN 277
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I + Q+G + +AL + ++ + GF TF+S+L AC + + L +
Sbjct: 278 VMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGR-LVHSHILE 336
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
G+ T LV++ ++ G LE+A ++ M D W +L+ A N
Sbjct: 337 RGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASN 387
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 167/357 (46%), Gaps = 52/357 (14%)
Query: 223 EARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERI--QPKDCVSFNAMIAG 278
E R L R+ ++++ V A+I+ + K L +AR +FE + + ++ VS+NAMIA
Sbjct: 25 EGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAA 84
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
YAQNG + EAL L+ M + D T VSV ACS+L +GR+ H V +G ++
Sbjct: 85 YAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSF 141
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
S+ NA++TMY+R G + D++ F+ + + + SWN +I A +Q G + AL F +M
Sbjct: 142 QSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKC 201
Query: 399 ----------------------------------NGFDPDGITFLSLLSACGHAGKVNES 424
NGFD D + +L++ G G +E+
Sbjct: 202 DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEA 261
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP---FEADTGVWGSLLA 481
++F+ M K + + ++ + G +A ++ Q + F+ + S+L
Sbjct: 262 REVFDKMKKRDMV-----SWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILG 316
Query: 482 ACVINLNVELGELAAKKM--RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
AC + G L + R LD + AV L N+YA G + +V MK +
Sbjct: 317 ACSSVKALAQGRLVHSHILERGLDSE-VAVATALVNMYAKCGSLEEARKVFNAMKNR 372
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 7/187 (3%)
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
MD QPD+ T ++V +CS+ + EGR H + + FE + V NA+I+MY +C ++D
Sbjct: 1 MDRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD 60
Query: 358 SELAFRQI--HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F + N+VSWN +IAA+AQ+GH +AL+ + +M L G D +TF+S+L AC
Sbjct: 61 ARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC 120
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ E + V G+ LV + +R G + A ++ Q + +T
Sbjct: 121 SSLAQGREIHN----RVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETS- 175
Query: 476 WGSLLAA 482
W +++ A
Sbjct: 176 WNAVILA 182
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF---LQESKNLFQS 106
V V A ++ ++ G + AR++F+ M +D + W+ +I Y NG+ ++++ +F
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDR 402
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEE 161
+ ++ + WN MI + N A F+ M + + T+ A++ GRL E
Sbjct: 403 LGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE 462
Query: 162 ATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
L Q+ NV+ +++ + + G +++A L K VVSWT M+ + +
Sbjct: 463 VKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQ 522
Query: 218 NERFCEARELFYRM------PD---YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
R+ EA +LF M PD Y +FV T G LE F +
Sbjct: 523 YGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCT-------HGGSLEQGWRYFTDMAELH 575
Query: 269 CVS-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
++ F AM+ ++G +A L M +PD ++ TAC
Sbjct: 576 GLAPTADHFAAMVDLLGRSGRLFDAKELLE---SMPFEPDPVAWMTFLTAC 623
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/549 (33%), Positives = 304/549 (55%), Gaps = 17/549 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF NA I+A ++ I A LFDQ+ D++++N +I Y G + +LF M
Sbjct: 74 VFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMRE 133
Query: 110 KNIV----SWNCMIAGCIDNDRIDDAFDY--FQAMPERNTATYNAMISGFLKHGRLEEAT 163
+V +++ +I C ++ + F + + + N++++ + K+G LEEA
Sbjct: 134 MGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAE 193
Query: 164 RLFEQMPR--RNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVK 217
+F M R+ +S+ +M+ + + KA AL M + ++ + ++T +
Sbjct: 194 MVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSC 253
Query: 218 NERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGM-LENARLLFERIQPKDCVSFNA 274
E + + ++KN V + +I + K G + +R +FE I D V +N
Sbjct: 254 VEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNT 313
Query: 275 MIAGYAQNG-VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
MI+GY+QN ++ EAL F M + PDD + V +ACS L ++G+Q H L +++
Sbjct: 314 MISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKS 373
Query: 334 GFEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+N +SV NA++TMYS+CG + D+ F+++ N V+ N+IIA +AQHG ++L
Sbjct: 374 EIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNL 433
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F QM P IT +S+LSAC H G+V E F +M ++GI P +EHY+C++D+L
Sbjct: 434 FEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLG 493
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG+L +A ++ MPF + W +LL AC N+EL E AA + +L+P N+ Y+M
Sbjct: 494 RAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIM 553
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
L+++Y+AA W + R+R LM+++G+ K+ SWIE+ +VH F+ D SHP I +IH+
Sbjct: 554 LASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMY 613
Query: 573 LKRASVQMK 581
L V+MK
Sbjct: 614 LDEMFVKMK 622
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 100/183 (54%), Gaps = 6/183 (3%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ NVF A+I + K ++ A LF++I D VSFN +I YA G AL LF
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129
Query: 294 GMIKMDMQPDDATLVSVFTA-CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M +M + D T V TA C+ + L+ RQ H L +GF++ VSV N+++T YS+
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLI---RQLHSLAFSSGFDSYVSVKNSLLTYYSKN 186
Query: 353 GGILDSELAFRQIHSP--NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
G + ++E+ F + + VSWN++I A+ QH KAL + M GF+ D T S
Sbjct: 187 GILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLAS 246
Query: 411 LLS 413
+L+
Sbjct: 247 VLT 249
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 39/207 (18%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ +C A + L G+ H + +++ ++ + N I +YS+C + + AF Q H PN
Sbjct: 14 ILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPN 73
Query: 370 -------------------------------LVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
LVS+NT+I A+A G AL F +M
Sbjct: 74 VFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMRE 133
Query: 399 NGFDPDGITFLSLLSA-CGHAGKVNESMDL-FELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G DG TF +++A C H G + + L F Y + +S L+ S+ G
Sbjct: 134 MGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNS-----LLTYYSKNGI 188
Query: 457 LEKAWQITQGMPFEA-DTGVWGSLLAA 482
LE+A + GM E D W S++ A
Sbjct: 189 LEEAEMVFNGMGEEVRDEVSWNSMIVA 215
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 266/461 (57%), Gaps = 8/461 (1%)
Query: 127 RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM----PRRNVISYTAMLD 182
R+D + F E N +++A+I ++ + A + QM N +++++L
Sbjct: 94 RLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLK 153
Query: 183 GF-MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
++ G+V +A+ + ++ T ++ Y + AR+LF +MP+ +++ +
Sbjct: 154 SCSLESGKVLHCQAIKLGLG-SDLYVRTGLVDVYARGGDVVCARQLFDKMPE--RSLVSL 210
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
T M+T + K+G L+ AR LFE ++ +D V +N MI GYAQ+GV E+L+LF M+
Sbjct: 211 TTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAI 270
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P++ T+++V +AC L L GR H + G + NV V A+I MYS+CG + D+ L
Sbjct: 271 PNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLV 330
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F +I ++V+WN++I +A HG + AL F +M G P ITF+ +LSACGH G V
Sbjct: 331 FDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLV 390
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
E F LM YGI P EHY C+V++L RAG LE+A+ + + M AD +WG+LL
Sbjct: 391 EEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLG 450
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
C +++N++LGE AK + + NS YV+LSN+YAA G W V ++R LMKE G+ K+
Sbjct: 451 CCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKE 510
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
S IE+ NKVH F+ G+ HP +I++ L + +K+
Sbjct: 511 HGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKA 551
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 23/295 (7%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+L ++V + +R G + ARQLFD+M + +++ ++T Y + G L +++
Sbjct: 168 IKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKAR 227
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF------QAMPERNTATYNAMISGFLK 155
+LF+ M +++V WN MI G + +++ F +A+P N T A++S +
Sbjct: 228 SLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIP--NEVTVLAVLSACGQ 285
Query: 156 HGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
G LE + + + NV TA++D + K G ++ AR + D + K+VV+W M
Sbjct: 286 LGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSM 345
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQPKDC 269
I GY + A +LF M + +T +++ G++E R F ++ K
Sbjct: 346 IVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYG 405
Query: 270 VS-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+ + M+ + G EEA G++K D L C L +
Sbjct: 406 IEPKIEHYGCMVNLLGRAGHLEEAY----GLVKNMTIAADPVLWGTLLGCCRLHV 456
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H ++R G N + + Y+ G + S F PN+ S++ II + Q
Sbjct: 65 QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACG-HAGKVNESMDLFELMVKVYGIIPSSEH 443
+++A ++SQM G +P+ TF S+L +C +GKV L + + S+
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKV--------LHCQAIKLGLGSDL 176
Query: 444 Y--TCLVDILSRAGQLEKAWQITQGMP 468
Y T LVD+ +R G + A Q+ MP
Sbjct: 177 YVRTGLVDVYARGGDVVCARQLFDKMP 203
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 307/549 (55%), Gaps = 38/549 (6%)
Query: 63 AGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV----SWNCM 118
+G + +A ++FD+M ++++TW +IT + Q G +++ +LF M + V +++ +
Sbjct: 196 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSV 255
Query: 119 IAGCIDNDRIDDAFDYFQAMPERNTA-------TYNAMISGFLKHGRLEEATRLFEQMPR 171
++ C + + + A + M + G ++++ ++FEQMP
Sbjct: 256 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 315
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF--- 228
NV+S+TA++ +++ GE DK + + + MI+G+++ F + L
Sbjct: 316 HNVMSWTAIITAYVQSGECDK----------EAIELFCKMISGHIRPNHFSFSSVLKACG 365
Query: 229 -YRMPDYDKNVF-------------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
P + V+ V ++I+ + + G +E+AR F+ + K+ VS+NA
Sbjct: 366 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 425
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
++ GYA+N +EEA LF+ + + T S+ + +++ + +G Q H +++ G
Sbjct: 426 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 485
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+++N +CNA+I+MYSRCG I + F ++ N++SW ++I FA+HG +AL F
Sbjct: 486 YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFH 545
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M G P+ IT++++LSAC H G ++E F M K +GI+P EHY C+VD+L R+
Sbjct: 546 KMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRS 605
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G L +A + MP AD VW +LL AC ++ N ELG AA+ + E +P + A Y++LS
Sbjct: 606 GLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLS 665
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
NL+A+AG W+DV ++R MKE+ + K+ SWIE+ N+VH F G+ SHP +I+ EL
Sbjct: 666 NLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELD 725
Query: 575 RASVQMKSV 583
+ + ++K +
Sbjct: 726 QLASKIKEM 734
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 213/453 (47%), Gaps = 25/453 (5%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
V N IS S+ G AR +F+ M K D+++W+A+++ + N ++ F M
Sbjct: 81 VLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLEL 140
Query: 109 --VKNIVSWNCMIAGCIDND-----RIDDAFDYFQAMPERNTATYNAMISGFLK-HGRLE 160
N + +I C + + I F E + +I F+K G L
Sbjct: 141 GFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLG 200
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGYV 216
A ++F++MP RN++++T M+ F + G A L M V +++ +++
Sbjct: 201 SAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 260
Query: 217 KNERFCEARELFYRMPDYDK--NVFVVTAMITGFCKV---GMLENARLLFERIQPKDCVS 271
+ ++L R+ +V V +++ + K G ++++R +FE++ + +S
Sbjct: 261 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 320
Query: 272 FNAMIAGYAQNGVAE-EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+ A+I Y Q+G + EA+ LF MI ++P+ + SV AC L G Q +
Sbjct: 321 WTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 380
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ G + V N++I+MY+R G + D+ AF + NLVS+N I+ +A++ E+A
Sbjct: 381 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 440
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVD 449
+ F+++ G TF SLLS G + + + ++K G S++ L+
Sbjct: 441 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK--GGYKSNQCICNALIS 498
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ SR G +E A+Q+ M + + W S++
Sbjct: 499 MYSRCGNIEAAFQVFNEME-DRNVISWTSMITG 530
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G A M + + PD T + +C + G+ H ++++G E + V
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 343 NAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
N +I++YS+CG + L F + + +LVSW+ +++ FA + +A+ F M GF
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC-LVDILSR-AGQLEK 459
P+ F +++ AC +A ++ +VK G + + C L+D+ + +G L
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKT-GYLEADVCVGCELIDMFVKGSGDLGS 201
Query: 460 AWQITQGMP 468
A+++ MP
Sbjct: 202 AYKVFDKMP 210
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 302/566 (53%), Gaps = 48/566 (8%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R + VF NA + S+ G I A +F ++ DV++WNA I+G +G Q +
Sbjct: 228 VVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHA 287
Query: 101 KNLFQSMP----VKNIVSWNC----------------------MIAGCIDNDRIDDAFDY 134
L M V N+ + + MI C D+D DY
Sbjct: 288 LELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSD------DY 341
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
A++ + K+G L++A ++FE +PR++++ + A++ G G ++
Sbjct: 342 IGV----------ALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESL 391
Query: 195 ALSDYM----SFKNVVSWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGF 248
+L M S N + ++ E + ++ + + VV +I +
Sbjct: 392 SLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSY 451
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K L A +FE + ++F +MI +Q E+A++LF M++ ++PD L
Sbjct: 452 WKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLS 511
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
S+ AC++L +G+Q H +I+ F +V NA++ Y++CG I D++LAF +
Sbjct: 512 SLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDK 571
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
+VSW+ +I AQHGH ++AL F +M P+ IT S+L AC HAG V+E+ F
Sbjct: 572 GVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYF 631
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
M +++GI + EHY+C++D+L RAG+L+ A ++ MPFEA+ VWG+LLAA ++ +
Sbjct: 632 SSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRD 691
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
ELG+LAA+K+ L+P+ S +V+L+N YA+AGMW +V +VR LMK+ V K+ A SW+E
Sbjct: 692 PELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVE 751
Query: 549 IGNKVHYFLGGDMSHPCIDKIHLELK 574
+ ++VH F+ GD SHP I+ +L+
Sbjct: 752 LKDRVHTFIVGDKSHPRARDIYAKLE 777
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 209/461 (45%), Gaps = 66/461 (14%)
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLF-QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
+ D+ NA++ Y GF+ E++ +F ++ +N VSWN M++ + NDR DA + F
Sbjct: 132 SGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFG 191
Query: 137 AMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFMKKG 188
M N ++ +++ LE ++ + R ++V + A++D + K G
Sbjct: 192 EMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLG 251
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY-------- 234
++ A + + +VVSW I+G V + A EL +M P+
Sbjct: 252 DIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILK 311
Query: 235 -------------------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
D + ++ A++ + K G+L++AR +FE I KD
Sbjct: 312 ACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDL 371
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+ +NA+I+G + G E+L LF M K + TL +V + ++L+ +++ Q H L
Sbjct: 372 LLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHAL 431
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ GF ++ V N +I Y +C + + F + S N++++ ++I A +Q H E A
Sbjct: 432 AEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDA 491
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT---- 445
+ F +M G +PD SLL+AC S+ +E +V+ + + T
Sbjct: 492 IKLFMEMLRKGLEPDPFVLSSLLNACA-------SLSAYEQGKQVHAHLIKRKFMTDVFA 544
Query: 446 --CLVDILSRAGQLEKAWQITQGMPFEADTGV--WGSLLAA 482
LV ++ G +E A G+P D GV W +++
Sbjct: 545 GNALVYTYAKCGSIEDADLAFSGLP---DKGVVSWSAMIGG 582
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 135/252 (53%), Gaps = 9/252 (3%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLF-ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
++FV A++ + G ++ AR +F E + ++ VS+N M++ + +N +A+ LF M
Sbjct: 134 DIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEM 193
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ ++P++ V AC+ + L GR+ H +V+R G++ +V NA++ MYS+ G I
Sbjct: 194 VWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDI 253
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ L F ++ ++VSWN I+ HGH + AL QM +G P+ T S+L AC
Sbjct: 254 HMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKAC 313
Query: 416 GHAGKVNESM--DLFELMVKVYGIIPSSEHY--TCLVDILSRAGQLEKAWQITQGMPFEA 471
AG ++ + M+K S+ Y LVD+ ++ G L+ A ++ + +P
Sbjct: 314 AGAGAGAFALGRQIHGFMIKA---CADSDDYIGVALVDMYAKYGLLDDARKVFEWIP-RK 369
Query: 472 DTGVWGSLLAAC 483
D +W +L++ C
Sbjct: 370 DLLLWNALISGC 381
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 144/601 (23%), Positives = 242/601 (40%), Gaps = 116/601 (19%)
Query: 34 TPHS-SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYW 92
+P S S L R +TQ +F+ + L ++G + A R N +++ Y
Sbjct: 3 SPESISPLLTRYAATQSLFLGAHIHAHLLKSGLLHAFR--------------NHLLSFYS 48
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG 152
+ ++ +F P VSW+ ++ +N +A F+AM R +
Sbjct: 49 KCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPI 108
Query: 153 FLK-----------HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
LK H + +T L + N + AM GF G VD+AR + D +
Sbjct: 109 VLKCAPDAGLGVQVHA-VAVSTGLSGDIFVANAL--VAMYGGF---GFVDEARRVFDEAA 162
Query: 202 F-KNVVSWTVMITGYVKNERFCEARELFYRM------PD--------------------- 233
+N VSW M++ +VKN+R +A ELF M P+
Sbjct: 163 RDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGR 222
Query: 234 ----------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
YDK+VF A++ + K+G + A L+F ++ D VS+NA I+G +G
Sbjct: 223 KVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHG 282
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVF--TACSALQLLNEGRQSHVLVIRNGFEANVSV 341
+ AL L M + P+ TL S+ A + GRQ H +I+ +++ +
Sbjct: 283 HDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYI 342
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
A++ MY++ G + D+ F I +L+ WN +I+ + G + ++L F +M G
Sbjct: 343 GVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGS 402
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVK---------VYGIIPS------------ 440
D + T ++L + ++++ + L K V G+I S
Sbjct: 403 DINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANK 462
Query: 441 --SEH-------YTCLVDILSRAGQLEKAWQITQGM---PFEADTGVWGSLLAACVINLN 488
EH +T ++ LS+ E A ++ M E D V SLL AC
Sbjct: 463 VFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 522
Query: 489 VELGE------LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
E G+ + K M ++ N+ VY YA G D + ++GV
Sbjct: 523 YEQGKQVHAHLIKRKFMTDVFAGNALVYT-----YAKCGSIEDADLAFSGLPDKGVVSWS 577
Query: 543 A 543
A
Sbjct: 578 A 578
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 12 LKRILFPPILRILSTPDSCGNFTPHS------SNCLIRLFSTQYVFVNNAKISALSRAGK 65
L++ L P + S ++C + + + ++ + R F T VF NA + ++ G
Sbjct: 499 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTD-VFAGNALVYTYAKCGS 557
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAG 121
I A F + K V++W+A+I G Q+G + + ++F+ M N ++ ++
Sbjct: 558 IEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCA 617
Query: 122 CIDNDRIDDAFDYFQAMPE-----RNTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVI 175
C +D+A YF +M E R Y+ MI + G+L++A L MP N
Sbjct: 618 CNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAA 677
Query: 176 SYTAML 181
+ A+L
Sbjct: 678 VWGALL 683
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 307/549 (55%), Gaps = 38/549 (6%)
Query: 63 AGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV----SWNCM 118
+G + +A ++FD+M ++++TW +IT + Q G +++ +LF M + V +++ +
Sbjct: 178 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSV 237
Query: 119 IAGCIDNDRIDDAFDYFQAMPERNTA-------TYNAMISGFLKHGRLEEATRLFEQMPR 171
++ C + + + A + M + G ++++ ++FEQMP
Sbjct: 238 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 297
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF--- 228
NV+S+TA++ +++ GE DK + + + MI+G+++ F + L
Sbjct: 298 HNVMSWTAIITAYVQSGECDK----------EAIELFCKMISGHIRPNHFSFSSVLKACG 347
Query: 229 -YRMPDYDKNVF-------------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
P + V+ V ++I+ + + G +E+AR F+ + K+ VS+NA
Sbjct: 348 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 407
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
++ GYA+N +EEA LF+ + + T S+ + +++ + +G Q H +++ G
Sbjct: 408 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 467
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+++N +CNA+I+MYSRCG I + F ++ N++SW ++I FA+HG +AL F
Sbjct: 468 YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFH 527
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M G P+ IT++++LSAC H G ++E F M K +GI+P EHY C+VD+L R+
Sbjct: 528 KMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRS 587
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G L +A + MP AD VW +LL AC ++ N ELG AA+ + E +P + A Y++LS
Sbjct: 588 GLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLS 647
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
NL+A+AG W+DV ++R MKE+ + K+ SWIE+ N+VH F G+ SHP +I+ EL
Sbjct: 648 NLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELD 707
Query: 575 RASVQMKSV 583
+ + ++K +
Sbjct: 708 QLASKIKEM 716
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 213/453 (47%), Gaps = 25/453 (5%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
V N IS S+ G AR +F+ M K D+++W+A+++ + N ++ F M
Sbjct: 63 VLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLEL 122
Query: 109 --VKNIVSWNCMIAGCIDND-----RIDDAFDYFQAMPERNTATYNAMISGFLK-HGRLE 160
N + +I C + + I F E + +I F+K G L
Sbjct: 123 GFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLG 182
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGYV 216
A ++F++MP RN++++T M+ F + G A L M V +++ +++
Sbjct: 183 SAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 242
Query: 217 KNERFCEARELFYRMPDYDK--NVFVVTAMITGFCKV---GMLENARLLFERIQPKDCVS 271
+ ++L R+ +V V +++ + K G ++++R +FE++ + +S
Sbjct: 243 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 302
Query: 272 FNAMIAGYAQNGVAE-EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+ A+I Y Q+G + EA+ LF MI ++P+ + SV AC L G Q +
Sbjct: 303 WTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 362
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ G + V N++I+MY+R G + D+ AF + NLVS+N I+ +A++ E+A
Sbjct: 363 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 422
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVD 449
+ F+++ G TF SLLS G + + + ++K G S++ L+
Sbjct: 423 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK--GGYKSNQCICNALIS 480
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ SR G +E A+Q+ M + + W S++
Sbjct: 481 MYSRCGNIEAAFQVFNEME-DRNVISWTSMITG 512
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G A M + + PD T + +C + G+ H ++++G E + V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 343 NAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
N +I++YS+CG + L F + + +LVSW+ +++ FA + +A+ F M GF
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC-LVDILSR-AGQLEK 459
P+ F +++ AC +A ++ +VK G + + C L+D+ + +G L
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKT-GYLEADVCVGCELIDMFVKGSGDLGS 183
Query: 460 AWQITQGMP 468
A+++ MP
Sbjct: 184 AYKVFDKMP 192
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 277/530 (52%), Gaps = 45/530 (8%)
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH 156
+ E++ +F MP +++VSWN ++AG N A + M E N I L
Sbjct: 186 VHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPA 245
Query: 157 GRLEEATRLFEQMP----RRNVISY----TAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
R+ +++ R S TA++D + K G + AR L D M +NVVSW
Sbjct: 246 VSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSW 305
Query: 209 TVMITGYVKNERFCEARELFYRMPD----------------------------------- 233
MI YV+NE EA +F +M D
Sbjct: 306 NSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 234 --YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
D+NV VV ++I+ +CK ++ A +F ++Q + VS+NAMI G+AQNG EAL
Sbjct: 366 LELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNY 425
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
FS M ++PD T VSV TA + L + + + H +V+RN + NV V A++ MY++
Sbjct: 426 FSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAK 485
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG I+ + L F + ++ +WN +I + HG + AL F +M P+G+TFLS+
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSV 545
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+SAC H+G V + F +M + Y I PS +HY +VD+L RAG+L +AW MP +
Sbjct: 546 ISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
V+G++L AC I+ NV E A+++ EL+P++ +V+L+N+Y AA MW V +VR+
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRV 665
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
M QG+ K S +EI N+VH F G +HP KI+ L++ Q+K
Sbjct: 666 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIK 715
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 160/292 (54%), Gaps = 6/292 (2%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV--- 205
++S F ++G ++EA R+FE + ++ + Y ML GF K ++DKA M V
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPV 134
Query: 206 ---VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
++ + + G R + + ++F +T + + K + AR +F+
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFD 194
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
R+ +D VS+N ++AGY+QNG+A AL + + M + +++P T+VSV A SAL+L+
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRI 254
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G++ H +R GF++ V++ A++ MY++CG + + L F + N+VSWN++I A+ Q
Sbjct: 255 GKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQ 314
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+ + ++A++ F +M G P ++ + L AC G + + +L V++
Sbjct: 315 NENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 189/375 (50%), Gaps = 20/375 (5%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVK 110
+S R G + A ++F+ + K + + ++ G+ + L ++ F M PV
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPV- 134
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG----FLKHGRLEEATRLF 166
+ ++ ++ C D + + + + + ++G + K ++ EA ++F
Sbjct: 135 -VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVF 193
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM-------SFKNVVSWTVMITGYVKNE 219
++MP R+++S+ ++ G+ + G A + + M SF +VS ++ ++
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSA-LRLI 252
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
R + + +D V + TA++ + K G L+ ARLLF+ + ++ VS+N+MI Y
Sbjct: 253 RIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAY 312
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
QN +EA+ +F M+ ++P D +++ AC+ L L GR H L + + NV
Sbjct: 313 VQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNV 372
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
SV N++I+MY +C + + F ++ S +VSWN +I FAQ+G +AL +FSQM
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQAR 432
Query: 400 GFDPDGITFLSLLSA 414
PD T++S+++A
Sbjct: 433 TVKPDTFTYVSVITA 447
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 157/319 (49%), Gaps = 15/319 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + A + ++ G + AR LFD M ++V++WN++I Y QN +E+ +FQ M
Sbjct: 271 VNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLD 330
Query: 110 KNIVSWNCMIAG----CIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEE 161
+ + + + G C D ++ + E RN + N++IS + K ++
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDT 390
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A +F ++ R ++S+ AM+ GF + G +A M + V ++ +IT +
Sbjct: 391 AASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAE 450
Query: 218 NERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
A+ + + DKNVFV TA++ + K G + ARL+F+ + + ++NAM
Sbjct: 451 LSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNG 334
I GY +G+ + AL LF M K ++P+ T +SV +ACS L+ G + H++
Sbjct: 511 IDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYS 570
Query: 335 FEANVSVCNAVITMYSRCG 353
E ++ A++ + R G
Sbjct: 571 IEPSMDHYGAMVDLLGRAG 589
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 155/322 (48%), Gaps = 11/322 (3%)
Query: 219 ERFCEARELFYRMPD------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
ER +EL + +P Y +++F T +++ FC+ G ++ A +FE I K V +
Sbjct: 45 ERCSSLKELRHILPLIFKNGLYQEHLFQ-TKLVSLFCRYGSVDEAARVFEPIDKKLNVLY 103
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
M+ G+A+ ++AL+ F M +++P + C L G++ H L+++
Sbjct: 104 YTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+GF ++ + MY++C + ++ F ++ +LVSWNTI+A ++Q+G AL
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
+ M P IT +S+L A + ++ ++ G T LVD+ +
Sbjct: 224 VNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRA-GFDSLVNIATALVDMYA 282
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
+ G L+ A + GM E + W S++ A V N N + + +KM + + + V VM
Sbjct: 283 KCGSLKTARLLFDGM-LERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVM 341
Query: 513 LSNLYAAAGMWRDVTRVRLLMK 534
L+A A + D+ R R + K
Sbjct: 342 -GALHACADLG-DLERGRFIHK 361
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
NCL + VFV A + ++ G I AR +FD M+ + V TWNA+I GY +G +
Sbjct: 467 NCL-----DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGK 521
Query: 99 ESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAM 149
+ LF+ M I V++ +I+ C + ++ F M E + Y AM
Sbjct: 522 AALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAM 581
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVIS-YTAMLDGFMKKGEVDKARALSDYM 200
+ + GRL EA QMP + ++ Y AML V+ A +++ +
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERL 633
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 312/616 (50%), Gaps = 61/616 (9%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYW--Q 93
HS L +T + + A+S G +S A LF + + + WN +I G +
Sbjct: 48 HSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSE 107
Query: 94 NGFL--QESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-------ERNTA 144
+ FL + ++ S N ++ + C +I A + Q E N
Sbjct: 108 SPFLALEYYVHMISSGTEPNEYTFPSIFKSCT---KIRGAHEGKQVHAHVLKLGLEHNAF 164
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
+ ++I+ + ++G L A +F++ R+ +S+TA++ G+ KG +D+AR L D + ++
Sbjct: 165 VHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRD 224
Query: 205 VVSWTVMITGYVKNERFCEARELFYRM------PDYD----------------------- 235
VVSW MI+GY ++ R EA F M P+
Sbjct: 225 VVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVR 284
Query: 236 ---------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
N+ +V +I + K G LE A LFE+IQ K+ VS+N MI GY +
Sbjct: 285 SWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYK 344
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN--GFEANVSVCNA 344
EAL LF M++ ++ P+D T +S+ AC+ L L+ G+ H V +N + V++ +
Sbjct: 345 EALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTS 404
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+I MY++CG + ++ F +++ +L +WN +I+ FA HGH + AL FS+M GF PD
Sbjct: 405 LIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPD 464
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
ITF+ +L+AC HAG ++ F M++ Y + P HY C++D+ RAG ++A +
Sbjct: 465 DITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLV 524
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
+ M + D +W SLL AC I+ +EL E AK + EL+P+N + YV+LSN+YA AG W
Sbjct: 525 KNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWE 584
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP-------CIDKIHLELKRAS 577
DV ++R + + + K S IE+ + VH FL GD HP +D+I + L++A
Sbjct: 585 DVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAG 644
Query: 578 VQMKSVDDFVEIATSW 593
+ + ++ W
Sbjct: 645 FVPDTSEVLYDMDEEW 660
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 303/564 (53%), Gaps = 26/564 (4%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
+V + I+A +R G I AR++FD+ + TWNA+ GY Q + LF M
Sbjct: 55 YVTPSFITACARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRA 114
Query: 108 -PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRL--E 160
N ++ ++ C + + + + +R NT A+I + G +
Sbjct: 115 GASPNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVA 174
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+A ++F +M +NV ++TA++ + ++ AR L D ++VV W V+++GY++
Sbjct: 175 DAYKVFAEMRDKNVFAWTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGD 234
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
ARELF RMPD D V +++G+ G +E+ LFE + ++ S+N +I GY
Sbjct: 235 MVAARELFDRMPDRD--VMSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYV 292
Query: 281 QNGVAEEALRLFSGMIKMD-----------MQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+NG+ +EAL F M+ + + P+D T+V+V TACS L L G+ HV
Sbjct: 293 RNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVY 352
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
G++ N+ V NA+I MY++CG I + F + ++++WNTII A HGH A
Sbjct: 353 AESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADA 412
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F +M G PDG+TF+ +LSAC H G V + F+ MV Y I+P EHY C+VD
Sbjct: 413 LSLFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVD 472
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L RAG ++KA I + MP E D +W +LL AC + NVE+ ELA +++ EL+P N
Sbjct: 473 LLGRAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKNVEMAELALQRLIELEPNNPGN 532
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
+VM+SN+Y G +DV R+++ M++ G K S I + + F D HP D I
Sbjct: 533 FVMVSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDSMVEFYSLDERHPETDSI 592
Query: 570 HLELKRASVQMKS---VDDFVEIA 590
+ L+ ++ ++S V + V++A
Sbjct: 593 YRALQGLTILLRSHGYVPNLVDVA 616
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 222/472 (47%), Gaps = 65/472 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF A ++A + +AR+LFD +DV+ WN +++GY + G + ++ LF MP
Sbjct: 188 VFAWTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPD 247
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
++++SWN +++G N ++ F+ MP RN ++N +I G++++G +EA F++M
Sbjct: 248 RDVMSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRM 307
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
+++G K+G D +DY V + + + + ++
Sbjct: 308 --------LVLVEGEGKEGS-DGVVVPNDY-----TVVAVLTACSRLGDLEMGKWVHVYA 353
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
Y N+FV A+I + K G++E A +F+ + KD +++N +I G A +G +AL
Sbjct: 354 ESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADAL 413
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG---FEANVSVCNAVI 346
LF M + +PD T V + +AC +H+ ++RNG F++ V + V
Sbjct: 414 SLFERMKRAGERPDGVTFVGILSAC-----------THMGLVRNGLLHFQSMVDDYSIV- 461
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
P + + ++ + G +KA+ +M + +PD +
Sbjct: 462 ---------------------PQIEHYGCMVDLLGRAGLIDKAVDIVRKMPM---EPDAV 497
Query: 407 TFLSLLSACGHAGKVNESMDLFELMV-KVYGIIPSSE-HYTCLVDILSRAGQLEKAWQIT 464
+ +LL AC ++ +++++ EL + ++ + P++ ++ + +I G+ + ++
Sbjct: 498 IWAALLGAC----RMYKNVEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARLK 553
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
M DTG + + VI N + E + + E P+ ++Y L L
Sbjct: 554 VAM---RDTG-FRKVPGCSVIGCNDSMVEFYS--LDERHPETDSIYRALQGL 599
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 142/306 (46%), Gaps = 33/306 (10%)
Query: 37 SSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
S+ L L + V + N +S G + AAR+LFD+M +DV++WN +++GY NG
Sbjct: 206 SARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGE 265
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-----------------P 139
++ LF+ MPV+N+ SWN +I G + N +A + F+ M P
Sbjct: 266 VESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVP 325
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARA 195
N T A+++ + G LE + + N+ A++D + K G ++KA
Sbjct: 326 --NDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALD 383
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGM 253
+ D + K++++W +I G + +A LF RM + VT +++ +G+
Sbjct: 384 VFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGL 443
Query: 254 LENARLLFERIQPKDCV-----SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
+ N L F+ + + + M+ + G+ ++A+ + KM M+PD
Sbjct: 444 VRNGLLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVR---KMPMEPDAVIWA 500
Query: 309 SVFTAC 314
++ AC
Sbjct: 501 ALLGAC 506
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ N +V + IT ++G + AR +F++ + ++NAM GYAQ + + LF+
Sbjct: 51 EGNDYVTPSFITACARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFAR 110
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + P+ T V +C+ EG + H +V + GF++N V A+I MYS GG
Sbjct: 111 MHRAGASPNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGG 170
Query: 355 IL--DSELAFRQIHSPNLVSWNTIIAA 379
+ D+ F ++ N+ +W I+AA
Sbjct: 171 VFVADAYKVFAEMRDKNVFAWTAIVAA 197
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+S+ C L+ Q ++ +G E N V + IT +R GGI + F +
Sbjct: 25 FISLLRTCGTCVRLH---QIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARRVFDKTA 81
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
PN +WN + +AQ + ++ F++M G P+ TF ++ +C A E +
Sbjct: 82 QPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEGEE 141
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQ--LEKAWQITQGMPFEADTGVWGSLLAACV 484
+ ++ K G ++ L+ + S G + A+++ M + + W +++AA V
Sbjct: 142 VHCVVAK-RGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMR-DKNVFAWTAIVAAHV 199
Query: 485 INLNVELGELAAKKMRELDPQNSAV--------YVMLSNLYAA 519
++ ++A+++ +L PQ V Y+ L ++ AA
Sbjct: 200 ACRDM----VSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAA 238
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 284/527 (53%), Gaps = 45/527 (8%)
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLK 155
++ LF + NI WN MI G + ND DDA +++ M N T+ ++ +
Sbjct: 65 TRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACAR 124
Query: 156 HGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
L+ ++ + + +V T+++ + K G ++ A + D + KNVVSWT +
Sbjct: 125 LLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAI 184
Query: 212 ITGYVKNERFCEARELFYRM------PD-------------------------------Y 234
I+GY+ +F EA ++F R+ PD
Sbjct: 185 ISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGM 244
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+NVFV T+++ + K G +E AR +F+ + KD VS+ AMI GYA NG+ +EA+ LF
Sbjct: 245 VRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQ 304
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + +++PD T+V V +AC+ L L G LV RN F N + A+I +Y++CG
Sbjct: 305 MQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGS 364
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F+ + + V WN II+ A +G+ + + F Q+ G PDG TF+ LL
Sbjct: 365 MSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCG 424
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C HAG V+E F M + + + PS EHY C+VD+L RAG L++A Q+ + MP EA+
Sbjct: 425 CTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAI 484
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VWG+LL AC I+ + +L ELA K++ EL+P NS YV+LSN+Y+A W + +VRL M
Sbjct: 485 VWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMN 544
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
E+ + K SWIE+ VH FL GD HP +KI+ +L + +MK
Sbjct: 545 EKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMK 591
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 168/364 (46%), Gaps = 47/364 (12%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV +++ Y + G+L+++ +F +P KN+VSW +I+G I + +A D F+ +
Sbjct: 146 DVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLL 205
Query: 140 ERNTA----TYNAMISGFLKHGRLEEATRL----FEQMPRRNVISYTAMLDGFMKKGEVD 191
E N A T ++S + G L + E RNV T+++D + K G ++
Sbjct: 206 EMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNME 265
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------ 233
KAR++ D M K++VSW MI GY N EA +LF +M PD
Sbjct: 266 KARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACA 325
Query: 234 --------------YDKNVFVV-----TAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
D+N F+ TA+I + K G + A +F+ ++ KD V +NA
Sbjct: 326 RLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNA 385
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR-N 333
+I+G A NG + + LF + K+ ++PD T + + C+ L++EGR+ + R
Sbjct: 386 IISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFF 445
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIF 392
++ ++ + R G + ++ R + N + W ++ A H + A +
Sbjct: 446 SLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELA 505
Query: 393 FSQM 396
Q+
Sbjct: 506 LKQL 509
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 179/446 (40%), Gaps = 84/446 (18%)
Query: 20 ILRILSTPDSCGNFTPHS--SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT 77
I+R+LS G+ C++ + + VFV + + ++ G + AR +FD M
Sbjct: 216 IVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP 275
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNC-----MIAGCIDNDRIDDAF 132
KD+++W A+I GY NG +E+ +LF M +N V +C +++ C ++
Sbjct: 276 EKDIVSWGAMIQGYALNGLPKEAIDLFLQMQREN-VKPDCYTVVGVLSACARLGALELG- 333
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
++ + +RN YN ++ TA++D + K G + +
Sbjct: 334 EWVSGLVDRNEFLYNPVLG--------------------------TALIDLYAKCGSMSR 367
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
A + M K+ V W +I+G N Y K F + + K+G
Sbjct: 368 AWEVFKGMKEKDRVVWNAIISGLAMN--------------GYVKISFGLFGQVE---KLG 410
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVF 311
I+P D +F ++ G G+ +E R F+ M + + P +
Sbjct: 411 -----------IKP-DGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMV 458
Query: 312 TACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQI----- 365
LL+E Q +IRN EAN V A++ +ELA +Q+
Sbjct: 459 DLLGRAGLLDEAHQ----LIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEP 514
Query: 366 -HSPNLVSWNTIIAAFAQHGHYEKALIFFSQM------GLNGFDPDGITFLSLLSACGH- 417
+S N V + I +A + K + ++ G + + DGI L+ H
Sbjct: 515 WNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHP 574
Query: 418 -AGKVNESMDLFELMVKVYGIIPSSE 442
+ K+ +D +KV G +P+++
Sbjct: 575 LSEKIYAKLDELTKKMKVAGYVPTTD 600
>gi|302802806|ref|XP_002983157.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
gi|300149310|gb|EFJ15966.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
Length = 704
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 293/529 (55%), Gaps = 11/529 (2%)
Query: 54 NAKISALSRAGKISAARQ-LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
NA I+ S I A+ +FD+M ++ ++WNA+++ Y Q G + +++ F+ MP ++
Sbjct: 91 NALITGYSDNRMIPEAKGVIFDEMPRREEVSWNALLSAYAQAGHVHLARSTFERMPRHDV 150
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
V+W +IA N ++++A + +PER+ + A+I + +G+L E+ R++ MP R
Sbjct: 151 VAWTALIAVSGQNGQLEEAEVLYDLIPERDLVAWTALIQAYGVNGQLTESKRVYALMPER 210
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
N +S+TAM+ + + GEV +AR + D + + + T MI Y +N +ARE+F +
Sbjct: 211 NRVSHTAMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIK 270
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+ D V AM+ + ML++A+ +F+ I+ K VS+N M+A YAQ G +EA +F
Sbjct: 271 NPD--VIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIF 328
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ ++ + +V A + L E R+ + + E + A++ M ++
Sbjct: 329 DSIPHKNVVSHNVMVV----AYAHNMDLAEARR----IFYSMDEKDTVTWTAMVAMLAQH 380
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + +++ F ++ N+VSWN++IA A GH A+ + M G PD ITF+ +L
Sbjct: 381 GRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGIL 440
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC H G V E F M +G+IP EHY +VD+L RAGQL A ++ + MPF D
Sbjct: 441 IACSHVGLVEEGWTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPD 500
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
G WGSLL +C + +V+LG AA+ + + D Q+S YV+L+N+Y++ G D VR
Sbjct: 501 VGAWGSLLGSCKTHSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNR 560
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
MK +GV KQ S I + +H F+ G+ SHP +I EL R MK
Sbjct: 561 MKARGVKKQPGVSLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMK 609
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 217/424 (51%), Gaps = 23/424 (5%)
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA 120
S G + +A+ +FDQ+ + +V++WN++I G+ Q+GF+ + +F MP + SWN MI
Sbjct: 5 SENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWNSMIT 64
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR-LFEQMPRRNVISYTA 179
G + + A F PE N ++NA+I+G+ + + EA +F++MPRR +S+ A
Sbjct: 65 GYAQSGDLAGATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVIFDEMPRREEVSWNA 124
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
+L + + G V AR+ + M +VV+WT +I +N + EA L+ +P+ D +
Sbjct: 125 LLSAYAQAGHVHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLYDLIPERD--LV 182
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
TA+I + G L ++ ++ + ++ VS AMI Y+QNG +A ++ +
Sbjct: 183 AWTALIQAYGVNGQLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLP--- 239
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
PD +T S+ A + + + R+ I+N +V CNA++ YS + ++
Sbjct: 240 -DPDQSTRTSMIVAYAQNGYIKDAREM-FDSIKN---PDVIACNAMMEAYSSAQMLDHAK 294
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F I LVSWNT++AA+AQ G+ ++A F D I +++S
Sbjct: 295 AMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIF----------DSIPHKNVVSHNVMVV 344
Query: 420 KVNESMDLFELMVKVYGIIPSSE-HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+MDL E Y + +T +V +L++ G+L +A ++ MP+ + W S
Sbjct: 345 AYAHNMDLAEARRIFYSMDEKDTVTWTAMVAMLAQHGRLAEAQELFAKMPYR-NVVSWNS 403
Query: 479 LLAA 482
L+A
Sbjct: 404 LIAG 407
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 33/271 (12%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+ A I A S+ G++ AR++ D + D T ++I Y QNG++++++ +F S+ ++
Sbjct: 215 HTAMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPDV 274
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
++ N M+ +D A F ++ ++ ++N M++ + + G L+EA +F+ +P +
Sbjct: 275 IACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHK 334
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
NV+S+ M+ + ++ +AR + M K+ V+WT M+ ++ R EA+ELF +MP
Sbjct: 335 NVVSHNVMVVAYAHNMDLAEARRIFYSMDEKDTVTWTAMVAMLAQHGRLAEAQELFAKMP 394
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
++ VS+N++IAG A G A+R
Sbjct: 395 ---------------------------------YRNVVSWNSLIAGMASCGHGMAAVRYL 421
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
M +PD T + + ACS + L+ EG
Sbjct: 422 YVMRNEGAKPDHITFMGILIACSHVGLVEEG 452
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V NA + A S A + A+ +FD + K +++WN ++ Y Q G L E+K++F S+P
Sbjct: 274 VIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPH 333
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
KN+VS N M+ N + +A F +M E++T T+ AM++ +HGRL EA LF +M
Sbjct: 334 KNVVSHNVMVVAYAHNMDLAEARRIFYSMDEKDTVTWTAMVAMLAQHGRLAEAQELFAKM 393
Query: 170 PRRNVISYTAMLDGFMKKGE 189
P RNV+S+ +++ G G
Sbjct: 394 PYRNVVSWNSLIAGMASCGH 413
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 41/228 (17%)
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP-- 403
+ +YS G + ++ F QI S N+VSWN++IA F+QHG A F++M P
Sbjct: 1 MQVYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARM------PRW 54
Query: 404 DGITFLSLLSACGHAGKVNESMDLFE---------------------LMVKVYGII---- 438
++ S+++ +G + + +F+ ++ + G+I
Sbjct: 55 SSSSWNSMITGYAQSGDLAGATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVIFDEM 114
Query: 439 PSSEH--YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
P E + L+ ++AG + A + MP D W +L+A N +E E+
Sbjct: 115 PRREEVSWNALLSAYAQAGHVHLARSTFERMP-RHDVVAWTALIAVSGQNGQLEEAEV-- 171
Query: 497 KKMRELDPQNSAV-YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
+ +L P+ V + L Y G + RV LM E+ A
Sbjct: 172 --LYDLIPERDLVAWTALIQAYGVNGQLTESKRVYALMPERNRVSHTA 217
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 294/518 (56%), Gaps = 10/518 (1%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N I+ S+ G++ A ++FD M KDV++W+++I+G + G + E++ LF MP +N+
Sbjct: 172 SNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNV 231
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V+W MI G + + + D F F M E N T ++ R E ++
Sbjct: 232 VTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGL 291
Query: 169 MPRR--NVISYTA--MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+ +V +Y A ++ + + +D A D M K++V+W +ITGYV++ +A
Sbjct: 292 VLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKA 351
Query: 225 RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
LF MP K+V T +I GF G ++ LF+ + KD +++ A+I+G
Sbjct: 352 VFLFENMPQ--KDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEE 409
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
E A F M++ ++P+ TL V +A +++ +LN+G Q H +V + E ++S+ N+
Sbjct: 410 YEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNS 469
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+++MYS+CG + D+ F I PN+V++NTII AQ+G ++AL F++M + P+
Sbjct: 470 LVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPN 529
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
ITFL +LSAC H G V E F+LM +Y I P +HY C+VD+L RAG ++A +
Sbjct: 530 HITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLV 589
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
MPF+ GVWG++L A +L +++ ELAA+ + EL+P ++ YV+LSNL++ +G R
Sbjct: 590 SSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDER 649
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+RL+ K +G+ K SWI + ++VH F G S
Sbjct: 650 KHELIRLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQS 687
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 215/399 (53%), Gaps = 21/399 (5%)
Query: 33 FTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYW 92
FTP + FSTQ LS+ G +A + Q ++K ++ N+ IT
Sbjct: 12 FTPLNFKPFFFNFSTQ----------ILSKRGNFDSATR---QKSSKFLVYCNSQITKLG 58
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG 152
+NG ++E++++F MP KN VSW ++ +N I+ A + F +P+ N A+YNAMI+
Sbjct: 59 RNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNAMITA 118
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+ + ++EA LF MP+RN +SY M+ GF+ G D A L + +VS V+I
Sbjct: 119 YHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKL--HREKPVIVSSNVLI 176
Query: 213 TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
GY K R +A +F M +K+V ++MI+G C+VG + AR LF+++ ++ V++
Sbjct: 177 NGYSKVGRVEDAVRIFDGMA--EKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTW 234
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
MI GY + ++ LF M + ++ + TL + AC + EG Q H LV+
Sbjct: 235 TLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLS 294
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
GF+ + + N++ITMYSRC I + F + ++V+WN++I + Q G+ EKA+
Sbjct: 295 LGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFL 354
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
F M D +++ +L+ G+++E + LF++M
Sbjct: 355 FENMP----QKDVVSWTTLICGFASEGRIDEFIGLFQMM 389
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 148/320 (46%), Gaps = 53/320 (16%)
Query: 28 DSCGNFTPHSSNCLIR--LFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVI 82
++CG+F + I + S + ++ N+ I+ SR I AA + FD M KD++
Sbjct: 274 EACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIV 333
Query: 83 TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN 142
TWN++ITGY Q+G L+++ LF++MP K++VSW +I G RID+ FQ MPE++
Sbjct: 334 TWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKD 393
Query: 143 TATYNAMISGFLKHGRLEEA----TRLFEQMPRRNVISYTAMLDG--------------- 183
+ A+ISG + E A ++ + + + N + + +L
Sbjct: 394 AIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHA 453
Query: 184 --------------------FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+ K G VD A + Y+ NVV++ +ITG +N E
Sbjct: 454 IVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKE 513
Query: 224 ARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFE------RIQPKDCVSFNAM 275
A E+F +M D N +++ VG++E R F+ IQP+ + M
Sbjct: 514 ALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPD-HYACM 572
Query: 276 IAGYAQNGVAEEALRLFSGM 295
+ + G+ +EA+ L S M
Sbjct: 573 VDLLCRAGMFDEAVSLVSSM 592
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 190/633 (30%), Positives = 326/633 (51%), Gaps = 118/633 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV ++ I+ + G IS A+++FD T K+++ WNA++ G+ QN +E+ +FQ M
Sbjct: 362 VFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRR 421
Query: 110 KNI----VSWNCMIAGCIDNDR-----------------------------------IDD 130
++ ++ ++ CI+ D ID
Sbjct: 422 ADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDV 481
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP-------------------- 170
A F +P +++ ++NA+I G + EEA + ++M
Sbjct: 482 AKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSN 541
Query: 171 ---------------RRNVISYTA----MLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ NV S A ++D + K G+V+ +R + ++ ++V +
Sbjct: 542 IRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINAL 601
Query: 212 ITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITG---------------------- 247
ITG V+N R EA ELF ++ + + F ++++G
Sbjct: 602 ITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSAL 661
Query: 248 --------------FCKVGMLENA-RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+ K +LE+A +LL E K+ V + A I+GYAQNG ++++L +F
Sbjct: 662 LNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMF 721
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M D++ D+AT SV ACS + L +G++ H L+I++GF + + +A++ MYS+C
Sbjct: 722 WRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKC 781
Query: 353 GGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G ++ S F+++ + N++ WN++I FA++G+ +AL+ F +M + PD +T L +
Sbjct: 782 GDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGV 841
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L AC HAG ++E +LF+ M +VYGI+P +HY CL+D+L R G L++A ++ +PF A
Sbjct: 842 LIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRA 901
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
D +W + LAAC ++ + E G++AAKK+ E++PQ S+ YV LS+L+AAAG W + R
Sbjct: 902 DGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVARE 961
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
M+E+GV K SWI +GNK + F+ D HP
Sbjct: 962 AMREKGVMKFPGCSWITVGNKTNLFVVQDTHHP 994
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 206/417 (49%), Gaps = 30/417 (7%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
F + ++ ++ AR++FD + D I W ++I GY + G Q++ LF M
Sbjct: 196 FCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKM 255
Query: 108 -PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+ V++ +I+ R+ DA + + +T +NA+IS + + G E L+
Sbjct: 256 GSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLY 315
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ M R+ ++ + +F +++S +T + + ++ A
Sbjct: 316 KDMKRQGLMPTRS---------------------TFASMLSAAASMTAFDEGQQI-HAAA 353
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+ + + D NVFV +++I + K G + +A+ +F+ K+ V +NAM+ G+ QN + E
Sbjct: 354 VKHGL---DANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQE 410
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
E +++F M + D++ DD T VSV AC L L+ GRQ H + I+N +A++ V NA++
Sbjct: 411 ETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAML 470
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MYS+ G I ++ F I + VSWN +I A + E+A+ +M G PD +
Sbjct: 471 DMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEV 530
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+F + ++AC + + +K Y + + + L+D+ S+ G +E + ++
Sbjct: 531 SFATAINACSNIRATETGKQIHCASIK-YNVCSNHAVGSSLIDLYSKFGDVESSRKV 586
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 275 MIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+++ +A++G + L F + + PD L V +ACS L L +GRQ H V+++
Sbjct: 130 VLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKS 189
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GF ++ ++ MY++C + D+ F I P+ + W ++IA + + G Y++AL F
Sbjct: 190 GFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALF 249
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
S+M G PD +T+++++S G+++++ L + + +PS+ + ++ S+
Sbjct: 250 SRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQ-----MPSTVAWNAVISSYSQ 304
Query: 454 AGQLEKAWQITQGMPFEA---DTGVWGSLLAACVINLNVELGEL--AAKKMRELDPQNSA 508
+G + + + + M + + S+L+A + G+ AA LD N
Sbjct: 305 SGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDA-NVF 363
Query: 509 VYVMLSNLYAAAGMWRDVTRV 529
V L NLY G D +V
Sbjct: 364 VGSSLINLYVKHGCISDAKKV 384
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/591 (31%), Positives = 304/591 (51%), Gaps = 58/591 (9%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ + + + G + AR++FD+M+ ++V +W AI+ Y G +E+ LF M +
Sbjct: 46 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE 105
Query: 111 NI----VSWNCMIAGC--IDNDRI-DDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEA 162
+ + + C + N R+ D +DY ++ E N+ +++ F+K GR++ A
Sbjct: 106 GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIA 165
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN---- 218
R FE++ ++V + M+ G+ KGE KA + M + V ++ I V
Sbjct: 166 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNL 225
Query: 219 ERFCEARELF---YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
RE+ ++ + D ++ V +++ + K +E AR F I+ D VS+NAM
Sbjct: 226 SLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAM 285
Query: 276 IA--GYAQNGVAEEALRLFSGM-------------------------------------- 295
+A G+ Q G + AL F M
Sbjct: 286 LAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLL 345
Query: 296 IKMDM---QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+M++ + + T+VS ACS L L +G++ H +IR G + + N++I MY RC
Sbjct: 346 REMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRC 405
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I S F + +LVSWN +I+ + HG A+ F Q G P+ ITF +LL
Sbjct: 406 GSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLL 465
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SAC H+G + E F++M Y + P+ E Y C+VD+LSRAGQ + + + MPFE +
Sbjct: 466 SACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPN 525
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
VWGSLL AC I+ N +L E AA+ + EL+PQ+S YV+++N+Y+AAG W D ++R L
Sbjct: 526 AAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCL 585
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
MKE+GVTK SWIE+ K+H F+ GD SHP +++I +++ +K +
Sbjct: 586 MKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEI 636
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 130/292 (44%), Gaps = 30/292 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAI--ITGYWQNGFLQESKNLFQSM 107
+ V N+ + ++ + AR+ F + D+++WNA+ +TG+ Q G + + FQ M
Sbjct: 248 LLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRM 307
Query: 108 PV----------KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGF 153
+ +++V WN +I+ C + R +A D + M E NT T + +
Sbjct: 308 HIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPAC 367
Query: 154 LKHGRLEEATRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
K L + + + + R + + +++D + + G + K+R + D M +++VSW
Sbjct: 368 SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWN 427
Query: 210 VMITGYVKNERFCEARELF--YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
VMI+ Y + +A LF +R N T +++ G++E F+ ++ +
Sbjct: 428 VMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 487
Query: 268 DCV-----SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ + M+ ++ G E L KM +P+ A S+ AC
Sbjct: 488 YAMDPAVEQYACMVDLLSRAGQFNETLEFIE---KMPFEPNAAVWGSLLGAC 536
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 86/188 (45%), Gaps = 5/188 (2%)
Query: 298 MDM-QPDDATLV--SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
MD+ PD+ + S+ C L L G Q H ++ NG + + + ++ +Y + G
Sbjct: 1 MDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC 60
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ D+ F ++ N+ SW I+ + G YE+ + F M G PD F + A
Sbjct: 61 VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKA 120
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C D+++ M+ + G +S ++D+ + G+++ A + + + F+ D
Sbjct: 121 CSELKNYRVGKDVYDYMLSI-GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVF 178
Query: 475 VWGSLLAA 482
+W +++
Sbjct: 179 MWNIMVSG 186
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 298/564 (52%), Gaps = 51/564 (9%)
Query: 57 ISALSRAGKISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
++A + G + +QL + D IT +++ Y + G ++ + ++F N+
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNV 311
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V WN M+ + +F+ F M N TY ++ G++E ++
Sbjct: 312 VLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSL 371
Query: 169 MPRRNVIS--YTA--MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE- 223
+ S Y + ++D + K G +DKAR + + + ++VVSWT MI GYV+++ FCE
Sbjct: 372 SIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHD-FCEE 430
Query: 224 ARELFYRMPD-------------------------------------YDKNVFVVTAMIT 246
A F M D Y ++ + ++
Sbjct: 431 ALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVN 490
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ + G E A LF I+ KD +++N +I+G+ Q+ + ++AL +F M + + + T
Sbjct: 491 LYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFT 550
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+S +A + L + +G+Q H ++ G + V NA+I++Y +CG I D+++ F ++
Sbjct: 551 FISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMS 610
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
N VSWNTII + +QHG +AL F QM G P+ +TF+ +L+AC H G V E +
Sbjct: 611 LRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLS 670
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
F+ M VYG+ P +HY C+VDIL RAGQL++A + MP A+ +W +LL+AC ++
Sbjct: 671 YFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
N+E+GELAAK + EL+P +SA YV+LSN YA G W + +VR +MK++G+ K+ SW
Sbjct: 731 KNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSW 790
Query: 547 IEIGNKVHYFLGGDMSHPCIDKIH 570
IE+ N VH F GD HP D+I+
Sbjct: 791 IEVKNAVHAFFVGDRLHPLSDQIY 814
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 215/454 (47%), Gaps = 28/454 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
FV NA I+ G A ++F M D +T+N +I+G+ Q G + + +F M +
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 110 KNI----VSWNCMIAGCI---DNDRIDDAFDY-FQAMPERNTATYNAMISGFLKHGRLEE 161
+ V+ ++A C D + Y +A + T +++ ++K G +E
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV---------VSWTVMI 212
A +F R NV+ + ML + + ++ K+ + M + + T
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTC 358
Query: 213 TGYVKNERFCEARELFYRMP---DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
TG + E E + + ++ +++V +I + K G L+ AR + E ++ +D
Sbjct: 359 TGQI------ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDV 412
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+ +MIAGY Q+ EEAL F M + PD+ L S +AC+ ++ + +G Q H
Sbjct: 413 VSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHAR 472
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
V +G+ A++S+ N ++ +Y+RCG ++ FR+I + ++WN +I+ F Q Y++A
Sbjct: 473 VYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQA 532
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L+ F +MG G + TF+S +SA + + + + VK G +E L+
Sbjct: 533 LMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALIS 591
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ + G +E A I M + W +++ +C
Sbjct: 592 LYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSC 624
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 201/447 (44%), Gaps = 18/447 (4%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
+ N I ++ G + ARQ+F +++++D ++W A+++GY Q+G +E+ L+ M
Sbjct: 79 LIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWT 138
Query: 108 ---PVKNIVSW---NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
P ++S C R+ A Y QA T NA+I+ +L G +
Sbjct: 139 AVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCS-ETFVGNALIALYLGFGSFKL 197
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A R+F M + +++ ++ G + G + A + D M + V+ ++
Sbjct: 198 AERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACAS 257
Query: 218 NERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ ++L + + +T +++ + K G +E A +F + V +N M
Sbjct: 258 VGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLM 317
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
+ Y Q ++ +F M + P+ T + C+ + G Q H L I+NGF
Sbjct: 318 LVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGF 377
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E+++ V +I MYS+ G + + + ++VSW ++IA + QH E+AL F +
Sbjct: 378 ESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKE 437
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G PD I S SAC + + + + V V G + LV++ +R G
Sbjct: 438 MQDCGVWPDNIGLASAASACAGIKAMRQGLQI-HARVYVSGYAADISIWNTLVNLYARCG 496
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
+ E+A+ + + + + D W L++
Sbjct: 497 RSEEAFSLFREIEHK-DEITWNGLISG 522
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 169/344 (49%), Gaps = 8/344 (2%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +I + K+G + +A ++F+++ R+ +S+ AML G+ + G +A L M + V+
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 207 S----WTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLL 260
+ +++ K + F + R + ++ + FV A+I + G + A +
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F + D V+FN +I+G+AQ G E AL++F M ++PD T+ S+ AC+++ L
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+G+Q H +++ G + +++ +Y +CG I + F N+V WN ++ A+
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
Q K+ F QM G P+ T+ +L C G++ + L +K G
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIK-NGFESD 380
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
L+D+ S+ G L+KA +I + M + D W S++A V
Sbjct: 381 MYVSGVLIDMYSKYGCLDKARKILE-MLEKRDVVSWTSMIAGYV 423
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 139/288 (48%), Gaps = 14/288 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ I S+ G + AR++ + + +DV++W ++I GY Q+ F +E+ F+ M
Sbjct: 381 MYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD 440
Query: 110 KNIVSWNCMIA----GCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEE 161
+ N +A C + + + + + +N +++ + + GR EE
Sbjct: 441 CGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEE 500
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALSDYMSFKNVVSWTVMITGYVK 217
A LF ++ ++ I++ ++ GF + +A + + NV ++ I+
Sbjct: 501 AFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALAN 560
Query: 218 NERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ +++ R + V A+I+ + K G +E+A+++F + ++ VS+N +
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTI 620
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
I +Q+G EAL LF M + ++P+D T + V ACS + L+ EG
Sbjct: 621 ITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEG 668
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 17/142 (11%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++ T V NA IS + G I A+ +F +M+ ++ ++WN IIT Q+G E+
Sbjct: 575 VKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEAL 634
Query: 102 NLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAM---------PERNTATYNA 148
+LF M + N V++ ++A C +++ YF++M P+ Y
Sbjct: 635 DLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDH----YAC 690
Query: 149 MISGFLKHGRLEEATRLFEQMP 170
++ + G+L+ A R ++MP
Sbjct: 691 VVDILGRAGQLDRARRFVDEMP 712
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H + G A+ + N +I +Y++ G + + F+++ S + VSW +++ +AQ G
Sbjct: 66 HATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLG 125
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++A +SQM P S+LSAC
Sbjct: 126 KEAFRLYSQMHWTAVIPTPYVLSSVLSAC 154
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 183/593 (30%), Positives = 309/593 (52%), Gaps = 52/593 (8%)
Query: 38 SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTT----KDVITWNAIITGYWQ 93
CL L T Y+ + NA SA++ G + +++ D+ NA+I Y +
Sbjct: 226 GGCLPNL--TTYLSILNA--SAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAK 281
Query: 94 NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAM 149
G + +++ +F M ++++SWN MI G N +AF F M + ++ TY ++
Sbjct: 282 CGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSL 341
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNV 205
++ + G E + + ++S +A + +++ G +D A+ + D ++ +NV
Sbjct: 342 LNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNV 401
Query: 206 VSWTVMITGYVKNERFCEARELFYRM------PDYDKNVFVVTA---------------- 243
+W MI G + + EA LF +M PD V +++A
Sbjct: 402 TTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSY 461
Query: 244 --------------MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
++ + K G A+ +F+ + ++ ++ MI+G AQ+G EA
Sbjct: 462 AIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAF 521
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF M++ + PD T VS+ +AC++ L ++ H + G +++ V NA++ MY
Sbjct: 522 SLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMY 581
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++CG + D+ F + ++ SW +I AQHG AL F +M L GF P+G +F+
Sbjct: 582 AKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFV 641
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
++LSAC HAG V+E F + + YGI P+ EHYTC+VD+L RAGQLE+A MP
Sbjct: 642 AVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPI 701
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
E WG+LL ACV N+E+ E AAK+ +L P++++ YV+LSN+YAA G W V
Sbjct: 702 EPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLV 761
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
R +M+ +G+ K+ SWIE+ N++H F+ GD SHP +I+ +LK ++K+
Sbjct: 762 RSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKA 814
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 227/550 (41%), Gaps = 120/550 (21%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V A ++ + G I A+ +FD+M ++VI+W +I G G QE+ + F M
Sbjct: 65 VRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQR 124
Query: 110 KNIV-------------------SW--------------------NCMIAGCIDNDRIDD 130
+ + W N ++ + IDD
Sbjct: 125 EGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDD 184
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLD---- 182
A F M ER+ ++ MI G +HGR +EA LF QM R N+ +Y ++L+
Sbjct: 185 ARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAI 244
Query: 183 -------------------GFM--------------KKGEVDKARALSDYMSFKNVVSWT 209
GF+ K G +D AR + D M ++V+SW
Sbjct: 245 TSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWN 304
Query: 210 VMITGYVKNERFCEARELFYRM------PDYD---------------------------- 235
MI G +N EA +F +M PD
Sbjct: 305 AMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV 364
Query: 236 ---KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
++ V +A + + + G +++A+L+F+++ ++ ++NAMI G AQ EAL LF
Sbjct: 365 GLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLF 424
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M + PD T V++ +A + L ++ H I G ++ V NA++ MY++C
Sbjct: 425 LQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKC 483
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + ++ F + N+ +W +I+ AQHG +A F QM G PD T++S+L
Sbjct: 484 GNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSIL 543
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SAC G + ++ V G++ LV + ++ G ++ A ++ M E D
Sbjct: 544 SACASTGALEWVKEVHSHAVNA-GLVSDLRVGNALVHMYAKCGSVDDARRVFDDM-LERD 601
Query: 473 TGVWGSLLAA 482
W ++
Sbjct: 602 VYSWTVMIGG 611
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 176/382 (46%), Gaps = 47/382 (12%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV A++ Y + G + +++ +F M +N++SW MI G R +AF F M
Sbjct: 64 DVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQ 123
Query: 140 ER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI----SYTAMLDGFMKKGEVD 191
N+ TY ++++ G LE + + A++ + K G +D
Sbjct: 124 REGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSID 183
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------ 233
AR + D M +++ SWTVMI G ++ R EA LF +M P+
Sbjct: 184 DARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASA 243
Query: 234 ---------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ ++ V A+I + K G +++ARL+F+ + +D +S+
Sbjct: 244 ITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISW 303
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NAMI G AQNG EA +F M + PD T +S+ + ++ H +
Sbjct: 304 NAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVE 363
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
G +++ V +A + MY RCG I D++L F ++ N+ +WN +I AQ +AL
Sbjct: 364 VGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSL 423
Query: 393 FSQMGLNGFDPDGITFLSLLSA 414
F QM GF PD TF+++LSA
Sbjct: 424 FLQMRREGFFPDATTFVNILSA 445
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 175/390 (44%), Gaps = 79/390 (20%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRR----NVISY--------------------------- 177
MI G+ ++G E+A +++ QM R N I+Y
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 178 --------TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
TA+++ ++K G +D A+ + D M +NV+SWTVMI G R EA F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 230 RMP------------------------DYDKNVF-------------VVTAMITGFCKVG 252
+M ++ K V V A++ + K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF- 311
+++AR++F+ + +D S+ MI G AQ+G +EA LF M + P+ T +S+
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 312 -TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
+A ++ L ++ H + GF +++ V NA+I MY++CG I D+ L F + ++
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
+SWN +I AQ+G +A F +M GF PD T+LSLL+ G ++ +
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH 360
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
V+V G++ + V + R G ++ A
Sbjct: 361 AVEV-GLVSDLRVGSAFVHMYIRCGSIDDA 389
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 115/208 (55%), Gaps = 2/208 (0%)
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI GYA+ G AE+A++++S M + QP++ T +S+ AC + L G++ H +I++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F+++V V A++ MY +CG I D++L F ++ N++SW +I A +G ++A F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
QM GF P+ T++S+L+A AG + ++ V G+ LV + +++
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA-GLALDLRVGNALVHMYAKS 179
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAA 482
G ++ A + GM E D W ++
Sbjct: 180 GSIDDARVVFDGM-VERDIFSWTVMIGG 206
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 193/646 (29%), Positives = 318/646 (49%), Gaps = 116/646 (17%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----PV 109
N IS ++G + AR+LFD M + +TW +I GY Q +E+ LF M
Sbjct: 87 NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 146
Query: 110 KNIVSWNCMIAGC-------------------------------IDN----DRIDDAFDY 134
+ V++ +++GC +D+ +R+D A
Sbjct: 147 PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQL 206
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR---------------------- 172
F+ MPE ++ +YNAMI+G+ K G E+A LF +M
Sbjct: 207 FKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDI 266
Query: 173 -----------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
NV A+LD + K V AR L D M ++ VS+ V+I+GY
Sbjct: 267 VLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGY 326
Query: 216 VKNERFCEARELFYRMP----------------------DY---------------DKNV 238
+ + A +LF + D+ D +
Sbjct: 327 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEI 386
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
V +++ + K G E A ++F + + V + AMI+ Y Q G EE L+LF+ M +
Sbjct: 387 LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQA 446
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ D AT S+ A +++ L+ G+Q H +I++GF +NV +A++ +Y++CG I D+
Sbjct: 447 SVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDA 506
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F+++ N+VSWN +I+A+AQ+G E L F +M L+G PD ++FL +LSAC H+
Sbjct: 507 VQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHS 566
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E + F M ++Y + P EHY +VD+L R+G+ +A ++ MP + D +W S
Sbjct: 567 GLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSS 626
Query: 479 LLAACVINLNVELGELAAKKMRELDP-QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+L AC I+ N EL AA ++ ++ +++A YV +SN+YAAAG W +V++V M+++G
Sbjct: 627 VLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRG 686
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
V K AYSW+EI ++ H F D HP I++I ++ + M+ +
Sbjct: 687 VKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEEL 732
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 199/403 (49%), Gaps = 51/403 (12%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T+ N + FLK+G L +A +LFE+MP +N +S M+ G++K G + +AR L D M
Sbjct: 51 DTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMV 110
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------------- 233
+ V+WT++I GY + +F EA ELF +M PD
Sbjct: 111 ERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQ 170
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
YD + V ++ +CK L+ A LF+ + D VS+NAMI GY+++G+
Sbjct: 171 VQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGL 230
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
E+A+ LF M ++P + T +V A L + G+Q H VI+ F NV V NA
Sbjct: 231 DEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNA 290
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ YS+ ++D+ F ++ + VS+N II+ +A G ++ A F ++ FD
Sbjct: 291 LLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRK 350
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYG--IIPSSEHY----TCLVDILSRAGQLE 458
F ++LS + ++D +E+ +++ I+ +++ LVD+ ++ G+ E
Sbjct: 351 QFPFATMLSIASN------TLD-WEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFE 403
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
+A I + + W ++++A V E G KMR+
Sbjct: 404 EAEMIFTNLTHRSAVP-WTAMISAYVQKGFYEEGLQLFNKMRQ 445
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 229/496 (46%), Gaps = 55/496 (11%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N ++ + G++S ARQLF++M K+ ++ N +I+GY ++G L E++ LF M +
Sbjct: 55 SNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTA 114
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISG---------------- 152
V+W +I G ++ +AF+ F M E + T+ ++SG
Sbjct: 115 VTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQ 174
Query: 153 -------------------FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
+ K RL+ A +LF++MP + +SY AM+ G+ K G +KA
Sbjct: 175 IIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKA 234
Query: 194 RALSDYM----------SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTA 243
L M +F V+ + + V ++ F ++ NVFV A
Sbjct: 235 VNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQI----HSFVIKTNFVWNVFVSNA 290
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
++ + K + +AR LF+ + +D VS+N +I+GYA +G + A LF +
Sbjct: 291 LLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRK 350
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
++ + S GRQ H I ++ + V N+++ MY++CG ++E+ F
Sbjct: 351 QFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 410
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+ + V W +I+A+ Q G YE+ L F++M D TF SLL A ++
Sbjct: 411 NLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSL 470
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
L ++K G + + + L+D+ ++ G ++ A Q Q MP + + W ++++A
Sbjct: 471 GKQLHSFIIKS-GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISAY 528
Query: 484 VINLNVELGELAAKKM 499
N E + K+M
Sbjct: 529 AQNGEAEATLKSFKEM 544
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 294/518 (56%), Gaps = 10/518 (1%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N I+ S+ G++ A ++FD M KDV++W+++I+G + G + E++ LF MP +N+
Sbjct: 180 SNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNV 239
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V+W MI G + + + D F F M E N T ++ R E ++
Sbjct: 240 VTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGL 299
Query: 169 MPRR--NVISYTA--MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+ +V +Y A ++ + + +D A D M K++V+W +ITGYV++ +A
Sbjct: 300 VLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKA 359
Query: 225 RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
LF MP K+V T +I GF G ++ LF+ + KD +++ A+I+G
Sbjct: 360 VFLFENMPQ--KDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEE 417
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
E A F M++ ++P+ TL V +A +++ +LN+G Q H +V + E ++S+ N+
Sbjct: 418 YEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNS 477
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+++MYS+CG + D+ F I PN+V++NTII AQ+G ++AL F++M + P+
Sbjct: 478 LVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPN 537
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
ITFL +LSAC H G V E F+LM +Y I P +HY C+VD+L RAG ++A +
Sbjct: 538 HITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLV 597
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
MPF+ GVWG++L A +L +++ ELAA+ + EL+P ++ YV+LSNL++ +G R
Sbjct: 598 SSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDER 657
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+RL+ K +G+ K SWI + ++VH F G S
Sbjct: 658 KHELIRLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQS 695
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 207/372 (55%), Gaps = 11/372 (2%)
Query: 60 LSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
LS+ G +A + Q ++K ++ N+ IT +NG ++E++++F MP KN VSW ++
Sbjct: 37 LSKRGNFDSATR---QKSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALL 93
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
+N I+ A + F +P+ N A+YNAMI+ + + ++EA LF MP+RN +SY
Sbjct: 94 TAYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYAT 153
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
M+ GF+ G D A L + +VS V+I GY K R +A +F M +K+V
Sbjct: 154 MITGFVHAGMFDMAEKL--HREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMA--EKDVV 209
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
++MI+G C+VG + AR LF+++ ++ V++ MI GY + ++ LF M +
Sbjct: 210 SWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREG 269
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++ + TL + AC + EG Q H LV+ GF+ + + N++ITMYSRC I +
Sbjct: 270 VEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAA 329
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + ++V+WN++I + Q G+ EKA+ F M D +++ +L+ G
Sbjct: 330 KQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMP----QKDVVSWTTLICGFASEG 385
Query: 420 KVNESMDLFELM 431
+++E + LF++M
Sbjct: 386 RIDEFIGLFQMM 397
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 148/320 (46%), Gaps = 53/320 (16%)
Query: 28 DSCGNFTPHSSNCLIR--LFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVI 82
++CG+F + I + S + ++ N+ I+ SR I AA + FD M KD++
Sbjct: 282 EACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIV 341
Query: 83 TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN 142
TWN++ITGY Q+G L+++ LF++MP K++VSW +I G RID+ FQ MPE++
Sbjct: 342 TWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKD 401
Query: 143 TATYNAMISGFLKHGRLEEA----TRLFEQMPRRNVISYTAMLDG--------------- 183
+ A+ISG + E A ++ + + + N + + +L
Sbjct: 402 AIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHA 461
Query: 184 --------------------FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+ K G VD A + Y+ NVV++ +ITG +N E
Sbjct: 462 IVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKE 521
Query: 224 ARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFE------RIQPKDCVSFNAM 275
A E+F +M D N +++ VG++E R F+ IQP+ + M
Sbjct: 522 ALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPD-HYACM 580
Query: 276 IAGYAQNGVAEEALRLFSGM 295
+ + G+ +EA+ L S M
Sbjct: 581 VDLLCRAGMFDEAVSLVSSM 600
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 298/552 (53%), Gaps = 24/552 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ + A I+ +R + AR+ FD+M K ++TWNA+I GY +NG + + ++Q M
Sbjct: 94 IILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVS 153
Query: 110 KNIVS------------WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
K+ + C + G I R +A ++ NA+I+ + K G
Sbjct: 154 KSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYAS-DSIVQNALINMYSKCG 212
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS----FKNVVSWTVMIT 213
LE A ++F+++ R+VI++ M+ G+ K+G +A L M NVV++ ++T
Sbjct: 213 SLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLT 272
Query: 214 GYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGM-LENARLLFERIQPKDCV 270
E + R + ++ + Y+ ++ + ++ + K LE AR +FER++ +D +
Sbjct: 273 ACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVI 332
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++N +I Y Q G A++AL +F M ++ P++ TL +V +AC+ L +G+ H L+
Sbjct: 333 TWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALI 392
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+A+V + N+++ MY+RCG + D+ F I +LVSW+T+IAA+AQHGH L
Sbjct: 393 ASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGL 452
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F ++ G D +T +S LSAC H G + E + F MV +G+ P H+ C+VD+
Sbjct: 453 EHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDL 512
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS-AV 509
LSRAG+LE A + MPF D W SLL+ C ++ + + A K+ EL+ ++ +
Sbjct: 513 LSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHST 572
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
+LSN+YA AG W DV + R + K S+IEI + VH F+ GD SHP + I
Sbjct: 573 VTLLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELI 629
Query: 570 HLELKRASVQMK 581
E+KR S QMK
Sbjct: 630 AAEIKRLSKQMK 641
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 153/292 (52%), Gaps = 29/292 (9%)
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ DA F A+ N+ ++ +++ F ++G EA + +M +L+G
Sbjct: 8 VADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRM----------VLEGLRPD 57
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGY-VKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
G + VV+ V + +K + A L R+ ++D + + TA+IT
Sbjct: 58 GAM-------------FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFD--IILGTALIT 102
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD---MQPD 303
+ + LE AR F+ + K V++NA+IAGY++NG AL+++ M+ M+PD
Sbjct: 103 MYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPD 162
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
T S AC+ + +++GR+ + +G+ ++ V NA+I MYS+CG + + F
Sbjct: 163 AITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFD 222
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++ + ++++WNT+I+ +A+ G +AL F +MG N P+ +TF+ LL+AC
Sbjct: 223 RLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTAC 274
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 120/239 (50%), Gaps = 6/239 (2%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K G + +A +F I+ + VS+ ++A +A+NG EAL + M+ ++PD A
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
V CS+ + L +G+ H +++ E ++ + A+ITMY+RC + + F ++
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQM---GLNGFDPDGITFLSLLSACGHAGKVNE 423
LV+WN +IA ++++G + AL + M G PD ITF S L AC G +++
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ E G S L+++ S+ G LE A ++ + D W ++++
Sbjct: 182 GREI-EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG 238
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 38/229 (16%)
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY +CG + D+ F I PN VSW I+AAFA++GHY +AL ++ +M L G PDG
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKV----YGIIPSSEHYT------------------ 445
F+ + C + + + L ++++ + II + T
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 446 ---------CLVDILSRAGQLEKAWQITQGMPFEADTGV------WGSLLAACVINLNVE 490
L+ SR G A +I Q M ++ G+ + S L AC + ++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 491 LG-ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
G E+ A+ + +S V L N+Y+ G +V +K + V
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 199/629 (31%), Positives = 319/629 (50%), Gaps = 115/629 (18%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF------------------------ 104
R +FD+M K+V++W ++++GY +NG E +L
Sbjct: 158 GRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALAD 217
Query: 105 ----------QSMPVKNIVSW-----NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
+M VKN + N +I + ++ + DA F +M R++ T+N M
Sbjct: 218 ESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIM 277
Query: 150 ISGFLKHGRLEEATRLFEQM-------------------PRRNVISYTAMLD-GFMKKG- 188
I G+ G E ++F +M ++ +++T L G +K G
Sbjct: 278 IGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGY 337
Query: 189 ------------------EVDKA-RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
VD+A + S + NVV+WT MI G+V+N +A +LF
Sbjct: 338 EFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFC 397
Query: 230 RM------PD---------------------------YDKNVFVVTAMITGFCKVG-MLE 255
+M P+ Y+K V TA++ + K G ++E
Sbjct: 398 QMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVE 457
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC- 314
+AR +F I KD V+++AM+ G AQ +E+A+ +F ++K ++P++ T SV AC
Sbjct: 458 SAR-VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACS 516
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
S+ + G+Q H +++G + V +A++TMYS+ G I +E F + ++VSWN
Sbjct: 517 SSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWN 576
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
++I + QHG +KAL F M G D +TF+ +L+AC HAG V E F +M+K
Sbjct: 577 SMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKD 636
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
Y I EHY+C+VD+ SRAG +KA I GMPF A +W +LLAAC ++ N+ELG+L
Sbjct: 637 YHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKL 696
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
AA+K+ L P ++ YV+LSN++A AG W + VR LM E+ V K+ SWIEI N++
Sbjct: 697 AAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIF 756
Query: 555 YFLGGDMSHPCIDKIHLELKRASVQMKSV 583
FL GD+SHP D ++ +L+ S+++K +
Sbjct: 757 SFLAGDVSHPFSDLVYAKLEELSIKLKDM 785
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 223/471 (47%), Gaps = 25/471 (5%)
Query: 29 SCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAII 88
+ GN SS I+ F + F+ + + +S + A QLFD+ KD+ +N ++
Sbjct: 17 TVGNGRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLL 76
Query: 89 TGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGC-IDNDRIDDAFDYFQAMPE--- 140
+ +N +E+ +LF+ + + ++ +C + C + D++ + Q++
Sbjct: 77 FDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFL 136
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
+ + +++ ++K E+ +F++M +NV+S+T++L G+ + G D+ L + M
Sbjct: 137 EDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQM 196
Query: 201 SFKNV--VSWT-VMITGYVKNERFCEARELFYRM---PDYDKNVFVVTAMITGFCKVGML 254
+ V +T + G + +E E + M ++ FV A+I + K M+
Sbjct: 197 QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMV 256
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+A +F+ + +D V++N MI GYA G E ++F M ++ + C
Sbjct: 257 GDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLC 316
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLVSW 373
S + LN +Q H V++NG+E + A++ YS+C + ++ F + N+V+W
Sbjct: 317 SQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTW 376
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF--ELM 431
+I F Q+ + +KA+ F QM G P+ T+ ++L AGK + + +++
Sbjct: 377 TAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL-----AGKPSSLLSQLHAQII 431
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
Y +PS T L+D + G + ++ ++ +P + D W ++L
Sbjct: 432 KAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAMLTG 479
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 188/451 (41%), Gaps = 53/451 (11%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
+DV +++ Y + ++ + +F M +KN+VSW +++G N D+ M
Sbjct: 137 EDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQM 196
Query: 139 P----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYT-----AMLDGFMKKGE 189
N T+ A + G L + E M +N +T A++ ++K
Sbjct: 197 QMEGVNPNGFTF-ATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEM 255
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP----DYDKNVF------ 239
V A A+ D M ++ V+W +MI GY + E ++F+RM + VF
Sbjct: 256 VGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKL 315
Query: 240 ---------------------------VVTAMITGFCKVGMLENARLLFERIQ-PKDCVS 271
+ TA++ + K ++ A LF + V+
Sbjct: 316 CSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVT 375
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ AMI G+ QN ++A+ LF M + ++P+ T +V + L Q H +I
Sbjct: 376 WTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL----SQLHAQII 431
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ +E SV A++ Y + G +++S F I + ++V+W+ ++ AQ EKA+
Sbjct: 432 KAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAME 491
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F Q+ G P+ TF S+++AC + E G + + L+ +
Sbjct: 492 VFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMY 551
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
S+ G +E A ++ E D W S++
Sbjct: 552 SKKGNIESAEKVFTRQE-ERDIVSWNSMITG 581
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 164/357 (45%), Gaps = 26/357 (7%)
Query: 152 GFLKH---------GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
GFL H R A +LF++ P +++ Y +L F + +A L F
Sbjct: 38 GFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHL-----F 92
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM-----------PDYDKNVFVVTAMITGFCKV 251
K++ S + + G + LF ++ + ++V V T+++ + K
Sbjct: 93 KDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKT 152
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
E+ R +F+ + K+ VS+ ++++GYA+NG+ +E + L + M + P+ T +V
Sbjct: 153 EDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVL 212
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
A + ++ G Q H ++++NGFE VCNA+I MY + + D+E F + + V
Sbjct: 213 GALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSV 272
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+WN +I +A G Y + F +M L G F + L C ++N + L +
Sbjct: 273 TWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGV 332
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
VK G + + T L+ S+ +++A+++ + W +++ V N N
Sbjct: 333 VK-NGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNN 388
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V++A ++ S+ G I +A ++F + +D+++WN++ITGY Q+G +++ +FQ M +
Sbjct: 543 VSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQG 602
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAM-----PERNTATYNAMISGFLKHGRLEEA 162
+ V++ ++ C +++ YF M ++ Y+ M+ + + G ++A
Sbjct: 603 LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKA 662
Query: 163 TRLFEQMP 170
+ MP
Sbjct: 663 MDIINGMP 670
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 107/233 (45%), Gaps = 16/233 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+ + + V A + A + G + + ++F + KD++ W+A++TG Q +++
Sbjct: 430 IIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKA 489
Query: 101 KNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMIS 151
+F + + N +++ +I C + + A ++ + +A+++
Sbjct: 490 MEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLT 549
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VS 207
+ K G +E A ++F + R+++S+ +M+ G+ + G+ KA + M + + V+
Sbjct: 550 MYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVT 609
Query: 208 WTVMITGYVKNERFCEARELFYRM-PDY--DKNVFVVTAMITGFCKVGMLENA 257
+ ++T E + F M DY DK + M+ + + GM + A
Sbjct: 610 FIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKA 662
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/603 (30%), Positives = 320/603 (53%), Gaps = 47/603 (7%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+ F +++N + S+ ++SAAR++FD +V ++N +I+ Y + +++ +
Sbjct: 35 IKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAH 94
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--------------------- 140
LF MP + VS+N +IA AF F M E
Sbjct: 95 QLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINV 154
Query: 141 ----------------RNTATYNAMISGFLKHGRLEEATRLFEQMPR-RNVISYTAMLDG 183
+ NA+I+ + K+G L+EA R+F + R+ +S+ +M+
Sbjct: 155 GLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVA 214
Query: 184 FMKKGEVDKARALSDYMSFKNVV----SWTVMITGYVKNERFCEARELFYRM--PDYDKN 237
+M+ E KA L M+ + ++ + ++T + + + ++ Y +N
Sbjct: 215 YMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQN 274
Query: 238 VFVVTAMITGFCKVG-MLENARLLFERIQPKDCVSFNAMIAGYA-QNGVAEEALRLFSGM 295
V + +I + K G + + R +F+ I D V +N MI+GY+ +++EAL F +
Sbjct: 275 SHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQL 334
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN-VSVCNAVITMYSRCGG 354
+ +PDD +LV V +ACS + ++GRQ H L ++ +N +SV NA+I MYS+CG
Sbjct: 335 QVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGN 394
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ D++ F + N VS+N++IA +AQHG ++L F +M GF P ITF+S+L+A
Sbjct: 395 LRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAA 454
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G+V + F +M + +GI P + H++C++D+L RAG+L +A ++ + +PF+
Sbjct: 455 CAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFF 514
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
W +LL AC I+ NVEL AA ++ +LDP N+A YVML+N+Y+ G +D VR LM+
Sbjct: 515 FWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMR 574
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSWS 594
++GV K+ SWIE+ ++H F+ D HP I KI L+ ++K V E+ ++
Sbjct: 575 DRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALV 634
Query: 595 SFD 597
D
Sbjct: 635 GGD 637
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C A + L G+ H L I++ + + N + +YS+C + + F H N+ S+
Sbjct: 18 CIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSF 77
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
NT+I+A+A+ + E A F +M PD +++ +L++A G + LF M +
Sbjct: 78 NTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAFQLFLEMRE 133
Query: 434 VY 435
+
Sbjct: 134 AF 135
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 266/473 (56%), Gaps = 23/473 (4%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA 148
TG W + FLQ NC+I + + A F MP+R++ +YN+
Sbjct: 151 TGIWSDLFLQ-----------------NCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNS 193
Query: 149 MISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNV 205
MI G++K G +E A LF+ MPR +N+IS+ +M+ G+ + + V+ A L M K++
Sbjct: 194 MIDGYIKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDL 253
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+SW +I GYVK+ R +A++LF+ MP D V MI G+ K+G + A+ LF+++
Sbjct: 254 ISWNSLIYGYVKHGRMEDAKDLFHVMPRRD--VVTWATMIDGYAKLGFVHKAKTLFDQMP 311
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGR 324
+D V++N+M+AGY QN EAL +FS M K + PD+ TLV V +A + L L++
Sbjct: 312 HRDVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLSAIAQLGQLSKAM 371
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H+ ++ F + A+I MYS+CG I + F I + ++ WN +I A HG
Sbjct: 372 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENKSIDHWNAMIGGLAIHG 431
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
E A ++ +PD ITF+ +L+AC H+G V E + FELM + + I P +HY
Sbjct: 432 LGESAFNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 491
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+VD+LSR G +E A + + MP E + +W + L AC + E+GEL AK +
Sbjct: 492 GCMVDLLSRCGSIELAKNLIEEMPIEPNDVIWRTFLTACNHHKEFEIGELVAKHLILQAG 551
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ G W+DV VR +MKE+ + K SWIE+ +VH F
Sbjct: 552 YNPSSYVLLSNMYASFGRWKDVRNVRTMMKERKLQKVPGCSWIELDGRVHEFF 604
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 212/412 (51%), Gaps = 50/412 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + ARQ+FD+M +D +++N++I GY + G ++ ++ LF MP
Sbjct: 157 LFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYIKCGLIESARELFDLMPR 216
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+KN++SWN MI+G +D ++ A F MPE++ ++N++I G++KHGR+E+A LF
Sbjct: 217 EMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLIYGYVKHGRMEDAKDLF 276
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
MPRR+V+++ M+DG+ K G V KA+ L D M ++VV++ M+ GYV+N EA E
Sbjct: 277 HVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNRHHMEALE 336
Query: 227 LFYRM-------PD--------------------YDKNVFVV-----------TAMITGF 248
+F M PD D ++++V A+I +
Sbjct: 337 IFSDMEKESHLTPDETTLVIVLSAIAQLGQLSKAMDMHLYIVEKQFYLGGKLGVALIDMY 396
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G ++ A +FE I+ K +NAMI G A +G+ E A + + + ++PD T V
Sbjct: 397 SKCGSIQQAMCVFEGIENKSIDHWNAMIGGLAIHGLGESAFNILLEIERRSIEPDYITFV 456
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SRCG I ELA I
Sbjct: 457 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDLLSRCGSI---ELAKNLIEE 513
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSA 414
PN V W T + A H +E + + L G++P LS + A
Sbjct: 514 MPIEPNDVIWRTFLTACNHHKEFEIGELVAKHLILQAGYNPSSYVLLSNMYA 565
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 62/329 (18%)
Query: 236 KNVFVVTAMITGFC---KVGMLENARLLFERIQP--------KDCVSFNAMIAGYAQNGV 284
KN + T ++ F + + E AR +F KD +N +I ++
Sbjct: 43 KNSNLTTKIVVAFADSRRPYLAEFARYVFREYHVCSFAPGDVKDPFLWNLVIKSHSHGVD 102
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
AL F M++ + D + V ACS L L G Q H + + G +++ + N
Sbjct: 103 PRRALLWFCLMLENGISVDKFSFSLVLKACSRLGFLKGGMQIHGFLRKTGIWSDLFLQNC 162
Query: 345 VITMYSRCG------------------------------GILDS-----ELAFRQIHSPN 369
+I +Y +CG G+++S +L R++ N
Sbjct: 163 LIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYIKCGLIESARELFDLMPREM--KN 220
Query: 370 LVSWNTIIAAFAQHGH-YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
L+SWN++I+ +AQ A F++M + D I++ SL+ G++ ++ DLF
Sbjct: 221 LISWNSMISGYAQTSDGVNIASKLFAEMP----EKDLISWNSLIYGYVKHGRMEDAKDLF 276
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL- 487
+M + + + ++D ++ G + KA + MP D + S++A V N
Sbjct: 277 HVMPRRDVVT-----WATMIDGYAKLGFVHKAKTLFDQMP-HRDVVAYNSMMAGYVQNRH 330
Query: 488 NVELGELAAKKMRE--LDPQNSAVYVMLS 514
++E E+ + +E L P + + ++LS
Sbjct: 331 HMEALEIFSDMEKESHLTPDETTLVIVLS 359
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 298/552 (53%), Gaps = 24/552 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ + A I+ +R + AR+ FD+M K ++TWNA+I GY +NG + + ++Q M
Sbjct: 94 IILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVS 153
Query: 110 KNIVS------------WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
K+ + C + G I R +A ++ NA+I+ + K G
Sbjct: 154 KSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYAS-DSIVQNALINMYSKCG 212
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS----FKNVVSWTVMIT 213
LE A ++F+++ R+VI++ M+ G+ K+G +A L M NVV++ ++T
Sbjct: 213 SLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLT 272
Query: 214 GYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGM-LENARLLFERIQPKDCV 270
E + R + ++ + Y+ ++ + ++ + K LE AR +FER++ +D +
Sbjct: 273 ACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVI 332
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++N +I Y Q G A++AL +F M ++ P++ TL +V +AC+ L +G+ H L+
Sbjct: 333 TWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALI 392
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+A+V + N+++ MY+RCG + D+ F I +LVSW+T+IAA+AQHGH L
Sbjct: 393 ASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGL 452
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F ++ G D +T +S LSAC H G + E + F MV +G+ P H+ C+VD+
Sbjct: 453 EHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDL 512
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS-AV 509
LSRAG+LE A + MPF D W SLL+ C ++ + + A K+ EL+ ++ +
Sbjct: 513 LSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHST 572
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
+LSN+YA AG W DV + R + K S+IEI + VH F+ GD SHP + I
Sbjct: 573 VTLLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELI 629
Query: 570 HLELKRASVQMK 581
E+KR S QMK
Sbjct: 630 AAEIKRLSKQMK 641
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 139/273 (50%), Gaps = 41/273 (15%)
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD---- 233
+ K G V A A+ + N VSWT+++ + +N + EA + RM PD
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 234 ----------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+ ++ + TA+IT + + LE AR F+ +
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD---MQPDDATLVSVFTACSALQLLNE 322
K V++NA+IAGY++NG AL+++ M+ M+PD T S ACS + +++
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GR+ + +G+ ++ V NA+I MYS+CG + + F ++ + ++++WNT+I+ +A+
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAK 241
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
G +AL F +MG N P+ +TF+ LL+AC
Sbjct: 242 QGAATQALELFQRMGPNDPKPNVVTFIGLLTAC 274
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 120/239 (50%), Gaps = 6/239 (2%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K G + +A +F I+ + VS+ ++A +A+NG EAL + M+ ++PD A
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
V CS+ + L +G+ H +++ E ++ + A+ITMY+RC + + F ++
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQM---GLNGFDPDGITFLSLLSACGHAGKVNE 423
LV+WN +IA ++++G + AL + M G PD ITF S L AC G +++
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ E G S L+++ S+ G LE A ++ + D W ++++
Sbjct: 182 GREI-EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG 238
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 38/229 (16%)
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY +CG + D+ F I PN VSW I+AAFA++GHY +AL ++ +M L G PDG
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKV----YGIIPSSEHYT------------------ 445
F+ + C + + + L ++++ + II + T
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 446 ---------CLVDILSRAGQLEKAWQITQGMPFEADTGV------WGSLLAACVINLNVE 490
L+ SR G A +I Q M ++ G+ + S L AC + ++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 491 LG-ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
G E+ A+ + +S V L N+Y+ G +V +K + V
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 292/543 (53%), Gaps = 41/543 (7%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV + R G++ AR++FD+M+ KDV+T +A++ Y + G L+E + M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
I E N ++N ++SGF + G +EA +F+++
Sbjct: 212 GI---------------------------EANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 171 R----RNVISYTAMLDGFMKKGEVDKARALSDYMS----FKNVVSWTVMITGYVKNERFC 222
+ ++ +++L ++ R + Y+ K+ + MI Y K+
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK----DCVSFNAMIAG 278
LF + + V A ITG + G+++ A +FE + + + VS+ ++IAG
Sbjct: 305 GIISLFNQFEMMEAGV--CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
AQNG EAL LF M ++P+ T+ S+ AC + L GR +H +R N
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V V +A+I MY++CG I S++ F + + NLV WN+++ F+ HG ++ + F +
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
PD I+F SLLSACG G +E F++M + YGI P EHY+C+V++L RAG+L+
Sbjct: 483 TRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+A+ + + MPFE D+ VWG+LL +C + NV+L E+AA+K+ L+P+N YV+LSN+YA
Sbjct: 543 EAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYA 602
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASV 578
A GMW +V +R M+ G+ K SWI++ N+V+ L GD SHP ID+I ++ S
Sbjct: 603 AKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISK 662
Query: 579 QMK 581
+M+
Sbjct: 663 EMR 665
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 176/433 (40%), Gaps = 97/433 (22%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
+IA + + +DA Q++P+ +++++I K ++ +F +M +I
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
+ +L K ++ +FK V + C + + D +
Sbjct: 116 SHVLPNLFK--------VCAELSAFK------------VGKQIHCVSC-----VSGLDMD 150
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
FV +M + + G + +AR +F+R+ KD V+ +A++ YA+ G EE +R+ S M
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 298 MDMQ-----------------------------------PDDATLVSVFTACSALQLLNE 322
++ PD T+ SV + ++LN
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCG----------------------------- 353
GR H VI+ G + V +A+I MY + G
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 354 -GILDS-----ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
G++D EL Q N+VSW +IIA AQ+G +AL F +M + G P+ +T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
S+L ACG+ + V+V+ ++ + + L+D+ ++ G++ + + M
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 468 PFEADTGVWGSLL 480
P + + W SL+
Sbjct: 450 PTK-NLVCWNSLM 461
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 128/316 (40%), Gaps = 68/316 (21%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
++ +I + +A L+ + I SF+++I + + +++ +FS M
Sbjct: 51 YISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSH 110
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ PD L ++F C+ L G+Q H + +G + + V ++ MY RCG + D+
Sbjct: 111 GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDA 170
Query: 359 ELAFRQIH-----------------------------------SPNLVSWNTIIAAFAQH 383
F ++ N+VSWN I++ F +
Sbjct: 171 RKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS 230
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES------------------- 424
G++++A++ F ++ GF PD +T S+L + G + +N
Sbjct: 231 GYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI 290
Query: 425 ---MDLFELMVKVYGIIPSSEHYTCL--------VDILSRAGQLEKA---WQITQGMPFE 470
+D++ VYGII + + + LSR G ++KA +++ + E
Sbjct: 291 SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 471 ADTGVWGSLLAACVIN 486
+ W S++A C N
Sbjct: 351 LNVVSWTSIIAGCAQN 366
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 18 PPILRILSTPDSCGNFTP-----HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQL 72
P + I S +CGN + +R+ V V +A I ++ G+I+ ++ +
Sbjct: 386 PNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIV 445
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAGCIDNDRI 128
F+ M TK+++ WN+++ G+ +G +E ++F+S+ + +S+ +++ C
Sbjct: 446 FNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLT 505
Query: 129 DDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLD 182
D+ + YF+ M E Y+ M++ + G+L+EA L ++MP + + A+L+
Sbjct: 506 DEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
Query: 183 GFMKKGEVDKARALSDYM 200
+ VD A ++ +
Sbjct: 566 SCRLQNNVDLAEIAAEKL 583
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 46/91 (50%)
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q+H ++++G + + + +I YS D++L + I P + S++++I A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ +++ FS+M +G PD +L C
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC 126
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 312/589 (52%), Gaps = 33/589 (5%)
Query: 7 FHQTYLK--RILFPPILRILSTPDSCGNFTPHS-----SNCLIRLFSTQYVFVNNAKISA 59
H YLK +P +L+ +CG + CL++ + V ++ +
Sbjct: 97 LHYPYLKPDSYTYPSVLK------ACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGM 150
Query: 60 LSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSW 115
++ A LF++M KDV WN +I+ Y+Q+G +E+ F M N V+
Sbjct: 151 YAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTI 210
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPR 171
I+ C ++ + + + ++ +A++ + K G LE A +FEQMP+
Sbjct: 211 TTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPK 270
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEAREL 227
+ V+++ +M+ G+ KG+ L M + V + + +I ++ R E + +
Sbjct: 271 KTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFV 330
Query: 228 F-YRMPD-YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
Y + + +VF+ ++++ + K G +E A +F+ I VS+N MI+GY G
Sbjct: 331 HGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKL 390
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EAL LFS M K ++PD T SV TACS L L +G + H L+I + N V A+
Sbjct: 391 FEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGAL 450
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY++CG + ++ F+ + +LVSW ++I A+ HG AL F++M + PD
Sbjct: 451 LDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDR 510
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
+TFL++LSACGHAG V+E F MV VYGIIP EHY+CL+D+L RAG+L +A++I Q
Sbjct: 511 VTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQ 570
Query: 466 GMP-FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
P D + +L +AC ++ N++LG A+ + + DP +S+ Y++LSN+YA+A W
Sbjct: 571 QNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWD 630
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
+V VR MKE G+ K SWIEI K+ F D SH +HLEL
Sbjct: 631 EVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSH-----LHLEL 674
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 167/405 (41%), Gaps = 75/405 (18%)
Query: 191 DKARALSDYMSFKNVVS-WTVMITGYVKNERFCEARELFYRMPDYD-------------- 235
D A+ + D M +S W ++ GY KN + EA ELF ++ Y
Sbjct: 55 DHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLK 114
Query: 236 ------------------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
++ V ++++ + K E A LF + KD
Sbjct: 115 ACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVAC 174
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N +I+ Y Q+G +EAL F M + +P+ T+ + ++C+ L LN G + H +I
Sbjct: 175 WNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELI 234
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+GF + + +A++ MY +CG + + F Q+ +V+WN++I+ + G +
Sbjct: 235 NSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQ 294
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNES----------------------MDLF- 428
F +M G P T SL+ C + ++ E MDL+
Sbjct: 295 LFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYF 354
Query: 429 -----ELMVKVYGIIPSSE--HYTCLVDILSRAGQLEKAWQITQGMP---FEADTGVWGS 478
EL ++ +IP S+ + ++ G+L +A + M E D + S
Sbjct: 355 KCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTS 414
Query: 479 LLAACVINLNVELGELAAKKM--RELDPQNSAVYVMLSNLYAAAG 521
+L AC +E GE + ++LD N V L ++YA G
Sbjct: 415 VLTACSQLAALEKGEEIHNLIIEKKLD-NNEVVMGALLDMYAKCG 458
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 292/543 (53%), Gaps = 41/543 (7%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV + R G++ AR++FD+M+ KDV+T +A++ Y + G L+E + M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
I E N ++N ++SGF + G +EA +F+++
Sbjct: 212 GI---------------------------EANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 171 R----RNVISYTAMLDGFMKKGEVDKARALSDYMS----FKNVVSWTVMITGYVKNERFC 222
+ ++ +++L ++ R + Y+ K+ + MI Y K+
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK----DCVSFNAMIAG 278
LF + + V A ITG + G+++ A +FE + + + VS+ ++IAG
Sbjct: 305 GIISLFNQFEMMEAGV--CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
AQNG EAL LF M ++P+ T+ S+ AC + L GR +H +R N
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V V +A+I MY++CG I S++ F + + NLV WN+++ F+ HG ++ + F +
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
PD I+F SLLSACG G +E F++M + YGI P EHY+C+V++L RAG+L+
Sbjct: 483 TRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+A+ + + MPFE D+ VWG+LL +C + NV+L E+AA+K+ L+P+N YV+LSN+YA
Sbjct: 543 EAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYA 602
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASV 578
A GMW +V +R M+ G+ K SWI++ N+V+ L GD SHP ID+I ++ S
Sbjct: 603 AKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISK 662
Query: 579 QMK 581
+M+
Sbjct: 663 EMR 665
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 176/433 (40%), Gaps = 97/433 (22%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
+IA + + +DA Q++P+ +++++I K ++ +F +M +I
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
+ +L K ++ +FK V + C + + D +
Sbjct: 116 SHVLPNLFK--------VCAELSAFK------------VGKQIHCVSC-----VSGLDMD 150
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
FV +M + + G + +AR +F+R+ KD V+ +A++ YA+ G EE +R+ S M
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 298 MDMQ-----------------------------------PDDATLVSVFTACSALQLLNE 322
++ PD T+ SV + ++LN
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCG----------------------------- 353
GR H VI+ G + V +A+I MY + G
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 354 -GILDS-----ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
G++D EL Q N+VSW +IIA AQ+G +AL F +M + G P+ +T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
S+L ACG+ + V+V+ ++ + + L+D+ ++ G++ + + M
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 468 PFEADTGVWGSLL 480
P + + W SL+
Sbjct: 450 PTK-NLVCWNSLM 461
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 128/316 (40%), Gaps = 68/316 (21%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
++ +I + +A L+ + I SF+++I + + +++ +FS M
Sbjct: 51 YISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSH 110
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ PD L ++F C+ L G+Q H + +G + + V ++ MY RCG + D+
Sbjct: 111 GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDA 170
Query: 359 ELAFRQIH-----------------------------------SPNLVSWNTIIAAFAQH 383
F ++ N+VSWN I++ F +
Sbjct: 171 RKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS 230
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES------------------- 424
G++++A++ F ++ GF PD +T S+L + G + +N
Sbjct: 231 GYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI 290
Query: 425 ---MDLFELMVKVYGIIPSSEHYTCL--------VDILSRAGQLEKA---WQITQGMPFE 470
+D++ VYGII + + + LSR G ++KA +++ + E
Sbjct: 291 SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 471 ADTGVWGSLLAACVIN 486
+ W S++A C N
Sbjct: 351 LNVVSWTSIIAGCAQN 366
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 18 PPILRILSTPDSCGNFTP-----HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQL 72
P + I S +CGN + +R+ V V +A I ++ G+I+ ++ +
Sbjct: 386 PNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIV 445
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAGCIDNDRI 128
F+ M TK+++ WN+++ G+ +G +E ++F+S+ + +S+ +++ C
Sbjct: 446 FNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLT 505
Query: 129 DDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLD 182
D+ + YF+ M E Y+ M++ + G+L+EA L ++MP + + A+L+
Sbjct: 506 DEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
Query: 183 GFMKKGEVDKARALSDYM 200
+ VD A ++ +
Sbjct: 566 SCRLQNNVDLAEIAAEKL 583
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 46/91 (50%)
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q+H ++++G + + + +I YS D++L + I P + S++++I A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ +++ FS+M +G PD +L C
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC 126
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 188/643 (29%), Positives = 318/643 (49%), Gaps = 112/643 (17%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N ++ + G++S ARQLF++M K+ ++ N +I+GY ++G L E++ LF M +
Sbjct: 50 SNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTA 109
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISG---------------- 152
V+W +I G ++ +AF+ F M E + T+ ++SG
Sbjct: 110 VTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQ 169
Query: 153 -------------------FLKHGRLEEATRLFEQMPRR--------------------- 172
+ K RL+ A +LF++MP
Sbjct: 170 IIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLG 229
Query: 173 --------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
NV A+LD + K V AR L D M ++ VS+ V+I+GY +
Sbjct: 230 QQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWD 289
Query: 219 ERFCEARELFYRM-------------------------------------PDYDKNVFVV 241
+ A +LF + D + V
Sbjct: 290 GKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVG 349
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
+++ + K G E A ++F + + V + AMI+ Y Q G EE L+LF+ M + +
Sbjct: 350 NSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVI 409
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
D AT S+ A +++ L+ G+Q H +I++GF +NV +A++ +Y++CG I D+
Sbjct: 410 ADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQT 469
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F+++ N+VSWN +I+A+AQ+G E L F +M L+G PD ++FL +LSAC H+G V
Sbjct: 470 FQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLV 529
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
E + F M ++Y + P EHY +VD+L R+G+ +A ++ MP + D +W S+L
Sbjct: 530 EEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLN 589
Query: 482 ACVINLNVELGELAAKKMRELDP-QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
AC I+ N EL AA ++ ++ +++A YV +SN+YAAAG W +V++V M+++GV K
Sbjct: 590 ACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKK 649
Query: 541 QCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
AYSW+EI ++ H F D HP I++I ++ + M+ +
Sbjct: 650 LPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEEL 692
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 213/468 (45%), Gaps = 47/468 (10%)
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF 132
FD T++ N + + +NG L +++ LF+ MP KN VS N MI+G + + + +A
Sbjct: 43 FDPDTSRS----NFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEAR 98
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAML---DGFM 185
F M ER T+ +I G+ + + +EA LF QM R + +++ +L +G
Sbjct: 99 KLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHE 158
Query: 186 KKGEVDKARALSDYMSFKN-VVSWTVMITGYVKNERFCEARELFYRMPDYDK-------- 236
++ + + + + + ++ ++ Y K+ R A +LF MP+ D
Sbjct: 159 MGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLC 218
Query: 237 -------------------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
NVFV A++ + K + +AR LF+ + +D VS
Sbjct: 219 ANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVS 278
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N +I+GYA +G + A LF + ++ + S GRQ H I
Sbjct: 279 YNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTI 338
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
++ + V N+++ MY++CG ++E+ F + + V W +I+A+ Q G YE+ L
Sbjct: 339 VTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQ 398
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F++M D TF SLL A ++ L ++K G + + + L+D+
Sbjct: 399 LFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS-GFMSNVFSGSALLDVY 457
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
++ G ++ A Q Q MP + + W ++++A N E + K+M
Sbjct: 458 AKCGSIKDAVQTFQEMP-DRNIVSWNAMISAYAQNGEAEATLKSFKEM 504
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 187/384 (48%), Gaps = 48/384 (12%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T+ N + FLK+G L +A +LFE+MP +N +S M+ G++K G + +AR L D M
Sbjct: 46 DTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMV 105
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDKNVFV------------VTA 243
+ V+WT++I GY + +F EA ELF +M PDY V + +T
Sbjct: 106 ERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQ 165
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+ T K+G ++RL+ N ++ Y ++ + A +LF M ++ D
Sbjct: 166 VQTQIIKLGY--DSRLIVG----------NTLVDSYCKSNRLDLACQLFKEMPEI----D 209
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
T +V A L + G+Q H VI+ F NV V NA++ YS+ ++D+ F
Sbjct: 210 SFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 269
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
++ + VS+N II+ +A G ++ A F ++ FD F ++LS +
Sbjct: 270 EMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASN------ 323
Query: 424 SMDLFELMVKVYG--IIPSSEHY----TCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
++D +E+ +++ I+ +++ LVD+ ++ G+ E+A I + + W
Sbjct: 324 TLD-WEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP-WT 381
Query: 478 SLLAACVINLNVELGELAAKKMRE 501
++++A V E G KMR+
Sbjct: 382 AMISAYVQKGFYEEGLQLFNKMRQ 405
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 207/449 (46%), Gaps = 69/449 (15%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV+NA + S+ + AR+LFD+M +D +++N II+GY +G + + +LF+ +
Sbjct: 245 VFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQF 304
Query: 110 ----KNIVSWNCMIAGCIDNDRID-DAFDYFQAMPERNTATY-----NAMISGFLKHGRL 159
+ + M++ I ++ +D + A TA N+++ + K G+
Sbjct: 305 TAFDRKQFPFATMLS--IASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKF 362
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKG----------EVDKARALSDYMSFKNVVSWT 209
EEA +F + R+ + +TAM+ +++KG ++ +A ++D +F +++ +
Sbjct: 363 EEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRAS 422
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
I ++ F + NVF +A++ + K G +++A F+ + ++
Sbjct: 423 ASIASLSLGKQL----HSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 478
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+NAMI+ YAQNG AE L+ F M+ +QPD + + V +ACS L+ EG
Sbjct: 479 VSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF-- 536
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
N++ +Y LD P + +++ + G + +A
Sbjct: 537 -------------NSMTQIYK-----LD----------PRREHYASVVDMLCRSGRFNEA 568
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACG-HAGK--VNESMDLFELMVKVYGIIPSSEHYTC 446
++M + DPD I + S+L+AC H + + D M ++ P Y
Sbjct: 569 EKLMAEMPI---DPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAP----YVN 621
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ +I + AGQ E ++ + M D GV
Sbjct: 622 MSNIYAAAGQWENVSKVHKAM---RDRGV 647
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 256/441 (58%), Gaps = 7/441 (1%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALS 197
+T ++ + G + A RLF+ MP+RNV + ++ + + G + A R +
Sbjct: 96 DTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMV 155
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLE 255
DY + ++ + + RE+ R+ + +++FV ++ + K G ++
Sbjct: 156 DYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVD 215
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+AR +F+RI+ +D V +N+MIA Y QNG EAL L M + P ATLVS +A +
Sbjct: 216 DARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAA 275
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L GR+ H R GF+ + +++ MY++ G + + + F Q+ LVSWN
Sbjct: 276 DAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNA 335
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I + HGH+++AL F++M + PD ITF+ +LSAC H G V E+ + F LMV V
Sbjct: 336 MICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDV 395
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
Y I P+ +H+TCLVD+L AG+ E+A+ + +GMP + D+G+WG+LL C I+ NVELGEL
Sbjct: 396 YSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGEL 455
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
A +K+ EL+P+++ YV+LSN+YA +G W RVR LM +G+ K SWIE+ K H
Sbjct: 456 ALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTH 515
Query: 555 YFLGGDMSHPCIDKIHLELKR 575
FL GD SHP +I+ EL+R
Sbjct: 516 GFLVGDASHPRSAEIYEELER 536
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 195/454 (42%), Gaps = 89/454 (19%)
Query: 66 ISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
+ RQL ++ D + ++ Y G + ++ LF MP +N+ WN +I
Sbjct: 78 LGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRA 137
Query: 122 CIDNDRIDDAFDYFQAM----PERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRN 173
+ + A ++ M E + TY + LE + E++ +
Sbjct: 138 YARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGED 197
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA--------- 224
+ ++D + K G VD ARA+ D + ++ V W MI Y +N R EA
Sbjct: 198 MFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAA 257
Query: 225 --------------------------REL--FYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
REL F +D+ + T+++ + K G ++
Sbjct: 258 NGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQV 317
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVSVFTACS 315
AR+LFE++ ++ VS+NAMI GY +G +EAL+LF+ M ++ + PD+ T V V +AC+
Sbjct: 318 ARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACN 377
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
++ E ++ L ++ +YS P + +
Sbjct: 378 HGGMVKEAKEFFGL---------------MVDVYSI---------------KPTVQHFTC 407
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KV 434
++ G +E+A M + PD + +LL+ C K++++++L EL + K+
Sbjct: 408 LVDVLGHAGRFEEAYDLIKGMPMQ---PDSGIWGALLNGC----KIHKNVELGELALQKL 460
Query: 435 YGIIPS-SEHYTCLVDILSRAGQLEKAWQITQGM 467
+ P + +Y L +I +++G+ EKA ++ + M
Sbjct: 461 IELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLM 494
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 116/290 (40%), Gaps = 51/290 (17%)
Query: 43 RLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
R+ T + +FV + ++ G + AR +FD++ +D + WN++I Y QNG E
Sbjct: 188 RVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPME 247
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCID---------NDRIDDAFDYFQAMPERNTATYNAMI 150
+ +L + M + + I R F + + +R +++
Sbjct: 248 ALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGF-DRQDKLKTSLV 306
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
+ K G ++ A LFEQ+ +R ++S+ AM+ G+ G D+A L + M + V+
Sbjct: 307 DMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVT--- 363
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE------RI 264
PD V V++A G GM++ A+ F I
Sbjct: 364 ---------------------PDNITFVGVLSACNHG----GMVKEAKEFFGLMVDVYSI 398
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+P F ++ G EEA L G M MQPD ++ C
Sbjct: 399 KPT-VQHFTCLVDVLGHAGRFEEAYDLIKG---MPMQPDSGIWGALLNGC 444
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
SV +C A + L GRQ H ++ +G + + ++ +Y+ CG + + F +
Sbjct: 67 SVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKR 126
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
N+ WN +I A+A+ G +E A+ + M G +PD T+ L AC + ++
Sbjct: 127 NVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVH 186
Query: 429 ELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
E +V G + + C LVD+ ++ G ++ A + + D+ VW S++AA
Sbjct: 187 E---RVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVR-DSVVWNSMIAA 238
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 183/529 (34%), Positives = 289/529 (54%), Gaps = 29/529 (5%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
IS+ S + A +F + K+ +NA+I G +N + S + F M + W
Sbjct: 81 ISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLM-----LKWK 135
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
I DR+ F A N A+ G LK G LE F+ R
Sbjct: 136 ------ISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFG-LE-----FDSFVR----- 178
Query: 177 YTAMLDGFMKKGEVDKARALSDYM--SFKN--VVSWTVMITGYVKNERFCEARELFYRMP 232
+++D ++K E+ A + D S KN V+ W V+I GY + +A ELF MP
Sbjct: 179 -VSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMP 237
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
D + ++I GF K+G + A+ LF ++ K+ VS+ M+ G++QNG E+AL F
Sbjct: 238 KKDTGSW--NSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETF 295
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M++ +P+D T+VS +AC+ + L+ G + H + NGF+ N+ + A++ MY++C
Sbjct: 296 FCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKC 355
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I +E F + L+ W+ +I +A HGH+ KAL +F M G PD + FL++L
Sbjct: 356 GNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVL 415
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
+AC H+G+VNE + F+ M + Y I PS +HYT +VD+L RAG+L++A + + MP D
Sbjct: 416 NACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPD 475
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
VWG+L AC + NVE+ ELA+KK+ +L+P++ YV LSN YA+ G W D RVR+
Sbjct: 476 FVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVS 535
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
M++ G K +S+IE+ +K+H F+ GD +H +I+ +L S +
Sbjct: 536 MRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAR 584
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 124/280 (44%), Gaps = 18/280 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + N I R G + A +LFD M KD +WN++I G+ + G + +K LF MP
Sbjct: 210 VLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPE 269
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRL 165
KN+VSW M+ G N + A + F M E N T + +S K G L+ R+
Sbjct: 270 KNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRI 329
Query: 166 FEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ + N++ TA++D + K G ++ A + K ++ W+VMI G+ + F
Sbjct: 330 HNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHF 389
Query: 222 CEARELF--YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----FNA 274
+A + F + + V A++ G + F+ ++ + +
Sbjct: 390 RKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTL 449
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
++ + G +EAL+ M + PD ++F AC
Sbjct: 450 VVDMLGRAGRLDEALKFIRA---MPITPDFVVWGALFCAC 486
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 192/647 (29%), Positives = 318/647 (49%), Gaps = 116/647 (17%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP--- 108
V NA + +++G I AR +FD MT +D+ +W +I G Q+G QE+ +LF M
Sbjct: 357 VGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNG 416
Query: 109 -VKNIVSWNCMI-----------------------AGCIDNDRI--------------DD 130
+ N+ ++ ++ AG I + RI DD
Sbjct: 417 CLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDD 476
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI----SYTAMLDG--- 183
A F M +R+ ++NAM+ G ++G EA +F QM + ++ +Y ++L+
Sbjct: 477 ARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGS 536
Query: 184 --------------------------------FMKKGEVDKARALSDYMSFKNVVSWTVM 211
+++ G +D AR L D +S ++V +W M
Sbjct: 537 TDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAM 596
Query: 212 ITGYVKNERFCEARELFYRM------PDYDKNVFVVTA---------------------- 243
I G + EA LF +M PD + +++A
Sbjct: 597 IGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL 656
Query: 244 --------MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
++ + K G ++ A+ +F+ + ++ ++ MI G AQ+G +A F M
Sbjct: 657 VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQM 716
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++ + PD T VS+ +AC++ L ++ H + G +++ V NA++ MY++CG I
Sbjct: 717 LREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSI 776
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
D+ F + ++ SW +I AQHG +AL FF +M GF P+G +++++L+AC
Sbjct: 777 DDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTAC 836
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
HAG V+E F M + YGI P+ EHYTC+VD+L RAG LE+A MP E D
Sbjct: 837 SHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAP 896
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WG+LL ACV N+E+ E AAK+ +L P++++ YV+LSN+YAA G W VR +M+
Sbjct: 897 WGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQR 956
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
+G+ K+ SWIE+ N++H F+ GD SHP +I+ +L ++K+
Sbjct: 957 KGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKA 1003
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 209/492 (42%), Gaps = 117/492 (23%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C+I+ Q ++V N + R G++ ARQ+FD++ K++ W +I GY + G ++
Sbjct: 143 CIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAED 202
Query: 100 SKNLFQSMPVK----NIVSWNCMIAGC--------------------------------- 122
+ ++ M + N +++ ++ C
Sbjct: 203 AMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVN 262
Query: 123 --IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI--SYT 178
+ I+DA F M ERN ++ MI G +GR +EA LF QM R I SYT
Sbjct: 263 MYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYT 322
Query: 179 -------------------------------------AMLDGFMKKGEVDKARALSDYMS 201
A++ + K G +D AR + D M+
Sbjct: 323 YVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMT 382
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------------- 233
+++ SWTVMI G ++ R EA LF +M P+
Sbjct: 383 ERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWV 442
Query: 234 -----------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+ ++ + A+I + K G +++ARL+F+ + +D +S+NAM+ G AQN
Sbjct: 443 KVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQN 502
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G EA +F M + + PD T +S+ + L + H + G ++ V
Sbjct: 503 GCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVG 562
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
+A I MY RCG I D+ L F ++ ++ +WN +I AQ +AL F QM GF
Sbjct: 563 SAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFI 622
Query: 403 PDGITFLSLLSA 414
PD TF+++LSA
Sbjct: 623 PDATTFINILSA 634
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 174/354 (49%), Gaps = 8/354 (2%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E+N N ++ +++ GRL+ A ++F+++ ++N+ +T M+ G+ + G + A + D
Sbjct: 150 EQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDK 209
Query: 200 MSFK----NVVSWTVMITGYV--KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
M + N +++ ++ N ++ + + +V V TA++ + K G
Sbjct: 210 MRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGS 269
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+E+A+L+F+++ ++ +S+ MI G A G +EA LF M + P+ T VS+ A
Sbjct: 270 IEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNA 329
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
++ L ++ H + G ++ V NA++ MY++ G I D+ + F + ++ SW
Sbjct: 330 NASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSW 389
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG-KVNESMDLFELMV 432
+I AQHG ++A F QM NG P+ T+LS+L+A A E + +
Sbjct: 390 TVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHA 449
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ G I L+ + ++ G ++ A + GM + D W +++ N
Sbjct: 450 EEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM-CDRDVISWNAMMGGLAQN 502
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 7/261 (2%)
Query: 266 PKDCVSFNAMIAGYAQNG----VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
P V NA + G A+ A++A+ + ++ + D + V++ C + +
Sbjct: 76 PSVLVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDIL 135
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
+Q HV +I++G E N+ V N ++ +Y RCG + + F ++ N+ W T+I +A
Sbjct: 136 LAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYA 195
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
++GH E A+ + +M P+ IT+LS+L AC + + +++ G
Sbjct: 196 EYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQ-SGFQSDV 254
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV-INLNVELGELAAKKMR 500
T LV++ + G +E A I M E + W ++ E L + R
Sbjct: 255 RVETALVNMYVKCGSIEDAQLIFDKM-VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQR 313
Query: 501 ELDPQNSAVYVMLSNLYAAAG 521
E NS YV + N A+AG
Sbjct: 314 EGFIPNSYTYVSILNANASAG 334
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 307/553 (55%), Gaps = 18/553 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV +A + + GK+ +F +M ++V++W AII G + G+ +E+ F M +
Sbjct: 103 VFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWI 162
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFD-YFQAMPERNTATY---NAMISGFLKHGRLEE 161
+ + +++ + C D+ ++ + + Q + + TA N + + + K G+L+
Sbjct: 163 QKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDY 222
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALSDYMSFKNVVSWTVMITGYVK 217
RLFE M +R+V+S+T ++ ++ G+ + A R + + N ++ +I+G
Sbjct: 223 GLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCAT 282
Query: 218 NERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
R +L + ++ V +++ + K L+ A +F+ + +D +S++ M
Sbjct: 283 LGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTM 342
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+GYAQ G EEA S M + +P++ SV + C + +L +G+Q H V+ G
Sbjct: 343 ISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGL 402
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E N V +A+I MYS+CG I ++ F + N+VSW +I +A+HG+ ++A+ F +
Sbjct: 403 EQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKK 462
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
+ G PD +TF+++L+AC HAG V+ F + KV+ I PS +HY C++D+L RAG
Sbjct: 463 LPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAG 522
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L A + Q MPF+ D VW +LL AC I+ +V+ G+ AA+K+ +LDP + ++ L+N
Sbjct: 523 RLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLAN 582
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP----CIDKIHL 571
+YAA G W++ VR +MK +GV K+ +SWI+ ++V F+ GD SHP D + L
Sbjct: 583 MYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDL 642
Query: 572 ELKRASVQMKSVD 584
+A + M+ +D
Sbjct: 643 LASQAEMHMQEMD 655
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 214/425 (50%), Gaps = 16/425 (3%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN-- 111
N + L + G ++ ARQLFD+M +D I+W II+GY E+ +LF M V+
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 112 -----IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEATR 164
I+S G + ++ + + + + +A++ ++K G+++E
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK----NER 220
+F++MP RNV+S+TA++ G ++ G +A A M + V T + +K +
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 221 FCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
RE+ + + FV + T + K G L+ LFE + +D VS+ +I
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
Q G E A++ F M + D+ P++ T +V + C+ L + G Q H VIR G +
Sbjct: 245 NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDS 304
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+SV N+++ MYS+C + + F+ + +++SW+T+I+ +AQ G E+A + S M
Sbjct: 305 LSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRR 364
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
G P+ F S+LS CG+ + + L ++ V G+ ++ + L+++ S+ G ++
Sbjct: 365 EGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCV-GLEQNTMVQSALINMYSKCGSIK 423
Query: 459 KAWQI 463
+A +I
Sbjct: 424 EASKI 428
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 169/343 (49%), Gaps = 9/343 (2%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN-- 204
N ++ +K G L A +LF++M +R+ IS+T ++ G++ +A +L M +
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 205 -----VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
++S + G + F E+ + D+ +VFV +A++ + K+G ++ +
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F+ + ++ VS+ A+IAG + G +EAL FS M + D T S AC+
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
LN GR+ H ++ GF A V N + TMY++CG + F + ++VSW TII +
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
Q G E A+ F +M P+ TF +++S C G++ L +++ G++
Sbjct: 245 NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIR-RGLVD 303
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
S ++ + S+ QL+ A + QG+ D W ++++
Sbjct: 304 SLSVANSIMAMYSKCWQLDLASTVFQGLS-RRDIISWSTMISG 345
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 203/420 (48%), Gaps = 42/420 (10%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T FV N + ++ GK+ +LF+ MT +DV++W II Q G + + F+
Sbjct: 201 TAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRR 260
Query: 107 MPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGR 158
M ++ ++ +I+GC RI+ + R + + N++++ + K +
Sbjct: 261 MRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQ 320
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF-------KNVVSWTVM 211
L+ A+ +F+ + RR++IS++ M+ G+ + G ++A DY+S+ N ++ +
Sbjct: 321 LDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEA---FDYLSWMRREGPRPNEFAFASV 377
Query: 212 ITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
++ + ++L + ++N V +A+I + K G ++ A +F+ + +
Sbjct: 378 LSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNI 437
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+ AMI GYA++G ++EA+ LF + K+ ++PD T ++V ACS L++ G
Sbjct: 438 VSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYF-- 495
Query: 330 VIRNGFEANVSVC------NAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQ 382
N +C +I + R G + D+E + + + V W+T++ A
Sbjct: 496 ---NSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRI 552
Query: 383 HGHYE---KALIFFSQMGLNGFDPD-GITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
HG + +A Q+ DP+ +T ++L + GK E+ ++ ++M K G++
Sbjct: 553 HGDVDCGKRAAEKILQL-----DPNCAVTHITLANMYAAKGKWKEAAEVRKMM-KSKGVV 606
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 132/269 (49%), Gaps = 13/269 (4%)
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMD 299
+ ++ K G L NAR LF+++ +D +S+ +I+GY EAL LFS M ++
Sbjct: 4 INLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPG 63
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+ D L AC ++ G H ++ F +V V +A++ MY + G + +
Sbjct: 64 LHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
+ F+++ N+VSW IIA + G+ ++AL +FS M + D TF S L AC +G
Sbjct: 124 IVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+N ++ +K G S L + ++ G+L+ ++ + M + D W ++
Sbjct: 184 ALNYGREIHCQTLK-KGFTAVSFVANTLATMYNKCGKLDYGLRLFESMT-QRDVVSWTTI 241
Query: 480 LAACVINLNVELGE-----LAAKKMRELD 503
+ + NV++G+ A ++MRE D
Sbjct: 242 IMS-----NVQIGQEENAVKAFRRMRETD 265
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 273/472 (57%), Gaps = 9/472 (1%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRN 173
M A C RI DA F M + +N +I G+ ++G ++A RLFE M + +
Sbjct: 165 MYASC---RRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPD 221
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
+ +L G + R + +++ + + T + C A +L ++ D
Sbjct: 222 SVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYD 281
Query: 234 --YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
K++ V TAM++G+ K+GM+++AR +F+++ +D V ++AMI+GYA++ +EAL+L
Sbjct: 282 GLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKL 341
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
F M++ PD T++SV +ACS + L + H V R+GF +SV NA+I MY++
Sbjct: 342 FDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAK 401
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG ++ + F + N++SW+++I AFA HG+ + A+ F +M +P+G+TF+ +
Sbjct: 402 CGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGV 461
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L ACGHAG V E LF M+ +GI P+ EHY C+VD+ RA L KA ++ + MPF
Sbjct: 462 LYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAP 521
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
+ +WGSL++AC ++ ELGE AAK++ EL+P + V+LSN+YA W DV +R
Sbjct: 522 NVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRK 581
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
M +G++K+ A S IEI N+VH F+ D H D+I+ +L ++K V
Sbjct: 582 SMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLV 633
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 206/452 (45%), Gaps = 56/452 (12%)
Query: 12 LKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQ 71
L R FP +L+ +S S N +L F+ I+ + +I AR
Sbjct: 119 LDRFSFPSLLKAVSKV-SAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARL 177
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI---------VSWNCMIAGC 122
LFD+M D + WN II GY QNG ++ LF+ M ++ V C AG
Sbjct: 178 LFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGN 237
Query: 123 IDNDRIDDAF--DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
+ R F D A+ ++ A+I+ + G ++ A ++++ + +++I TAM
Sbjct: 238 LSYGRTIHEFVKDNGYAI---DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAM 294
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD- 233
L G+ K G V AR + D M +++V W+ MI+GY ++++ EA +LF M PD
Sbjct: 295 LSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQ 354
Query: 234 ------------------------------YDKNVFVVTAMITGFCKVGMLENARLLFER 263
+ + + V A+I + K G L AR +FE
Sbjct: 355 ITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFEN 414
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ K+ +S+++MI +A +G A+ A++LF M +++++P+ T + V AC L+ EG
Sbjct: 415 MPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEG 474
Query: 324 RQSHVLVI-RNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFA 381
+ +I +G ++ +Y R + + EL +PN++ W ++++A
Sbjct: 475 EKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQ 534
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
HG E L F+ L +PD L +LS
Sbjct: 535 VHG--EAELGEFAAKRLLELEPDHDGALVVLS 564
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 161/335 (48%), Gaps = 37/335 (11%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
F+ T +I + + +ARLLF+++ D V++N +I GY QNG ++ALRLF M
Sbjct: 157 FIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSS 216
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG---- 354
DM+PD L +V +AC L+ GR H V NG+ + + A+I MY+ CG
Sbjct: 217 DMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLA 276
Query: 355 ---------------------------ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ D+ F Q+ +LV W+ +I+ +A+ +
Sbjct: 277 RKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQ 336
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+AL F +M PD IT LS++SAC H G + ++ + V G + L
Sbjct: 337 EALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQA-NWIHTYVDRSGFGRALSVNNAL 395
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
+D+ ++ G L KA ++ + MP + W S++ A ++ N + ++M+E++ + +
Sbjct: 396 IDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPN 454
Query: 508 AVYVMLSNLYAA--AGMWRDVTRV-RLLMKEQGVT 539
V + LYA AG+ + ++ ++ E G++
Sbjct: 455 GV-TFIGVLYACGHAGLVEEGEKLFSSMINEHGIS 488
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 2/196 (1%)
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
N ++ +++ E+ + L+ + ++ D + S+ A S + N G + H L
Sbjct: 89 NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ GF + + +I MY+ C I+D+ L F ++ P+ V+WN II + Q+GHY+ AL
Sbjct: 149 KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F M + PD + ++LSACGHAG ++ + E VK G S T L+++
Sbjct: 209 LFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEF-VKDNGYAIDSHLQTALINMY 267
Query: 452 SRAGQLEKAWQITQGM 467
+ G ++ A +I G+
Sbjct: 268 ANCGAMDLARKIYDGL 283
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 259/446 (58%), Gaps = 37/446 (8%)
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+V +++ + K G V+ AR + D M +++VSW MI Y +N EA ++F+ M
Sbjct: 97 DVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMR 156
Query: 233 D-------------------------------------YDKNVFVVTAMITGFCKVGMLE 255
+ D N++V TA++ + K GM+
Sbjct: 157 NEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMIN 216
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A +FE +Q K V++++M+AGY Q+ EEAL L+ +M ++ + TL SV ACS
Sbjct: 217 DAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 276
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L L EG+Q H ++ ++GF +NV V ++ + MY++CG + +S + F ++ N+ WNT
Sbjct: 277 NLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNT 336
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
II+ FA+H ++ +I F +M +G P+ +TF SLLS CGH G V E F+LM Y
Sbjct: 337 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 396
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
G+ P+ HY+C+VDIL RAG L +A+++ + +PFE +WGSLLA+C + N+EL E+A
Sbjct: 397 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVA 456
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
AKK+ EL+P+N+ +V+LSN+YAA W ++ + R L+++ V K SWI+I +KVH
Sbjct: 457 AKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHI 516
Query: 556 FLGGDMSHPCIDKIHLELKRASVQMK 581
F G+ SHP I +I L ++++
Sbjct: 517 FRVGESSHPRIREICTMLDNLVIELR 542
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 171/346 (49%), Gaps = 16/346 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V ++N I+A S+ G + ARQ+FD M + +++WN +I Y +N E+ ++F M
Sbjct: 98 VTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRN 157
Query: 110 KNI----VSWNCMIAGCIDN-DRIDDAFDYFQAMP---ERNTATYNAMISGFLKHGRLEE 161
+ + + +++ C N D ++ + +M + N A++ + K G + +
Sbjct: 158 EGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMIND 217
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL---SDYMSF-KNVVSWTVMITGYVK 217
A ++FE M ++ +++++M+ G+++ ++A L + MS +N + + +I
Sbjct: 218 AVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSN 277
Query: 218 NERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E +++ R + NVFV ++ + + K G L + ++F +Q K+ +N +
Sbjct: 278 LAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTI 337
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-G 334
I+G+A++ +E + LF M + M P++ T S+ + C L+ EGR+ L+ G
Sbjct: 338 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYG 397
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAA 379
NV + ++ + R G + ++ + I P W +++A+
Sbjct: 398 LSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLAS 443
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 135/269 (50%), Gaps = 5/269 (1%)
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
G V + C + + RM + +V + +I + K G +E AR +F+ + + VS+N
Sbjct: 77 GAVMEAKACHGKTM--RM-ELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWN 133
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
MI Y +N + EAL +F M + + T+ SV +AC A E ++ H L ++
Sbjct: 134 TMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKT 193
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
+ N+ V A++ +Y++CG I D+ F + + V+W++++A + Q +YE+AL+ +
Sbjct: 194 SLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLY 253
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+ + + T S++ AC + + E + ++ K G + + VD+ ++
Sbjct: 254 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRK-SGFGSNVFVASSAVDMYAK 312
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G L +++ I + E + +W ++++
Sbjct: 313 CGSLRESYIIFSEVQ-EKNIELWNTIISG 340
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 7/219 (3%)
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
+ + + C+ + E + H +R + +V++ N +I YS+CG + + F
Sbjct: 64 SDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDG 123
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ +LVSWNT+I + ++ +AL F +M GF T S+LSACG E
Sbjct: 124 MLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALEC 183
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
L L +K + + T L+D+ ++ G + A Q+ + M + + W S++A V
Sbjct: 184 KKLHCLSMKT-SLDLNLYVGTALLDLYAKCGMINDAVQVFESMQ-DKSSVTWSSMVAGYV 241
Query: 485 INLNVELGELAAKKMRELD-PQN----SAVYVMLSNLYA 518
+ N E L ++ + + QN S+V SNL A
Sbjct: 242 QSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 280
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 183/577 (31%), Positives = 293/577 (50%), Gaps = 79/577 (13%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP---ER 141
NA++T Y + G + ++K +FQS+ ++ SWN +I + A F+ M +
Sbjct: 146 NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDVKP 205
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALS 197
N+ TY +ISGF L E ++ ++ +++ TA+++ + K G +AR +
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVF 265
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------------------------- 232
D M +++VSW VMI YV N F EA EL+ ++
Sbjct: 266 DKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALA 325
Query: 233 ------------DYDKNVFVVTAMITGFCKVGMLE------------------------- 255
D V V TA++ + K G LE
Sbjct: 326 QGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYA 385
Query: 256 ---------NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDA 305
AR +F+R+ +D +S+NAMI Y QNG A A+++F M ++PD
Sbjct: 386 SNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAV 445
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T ++V AC++L L+E + H + + E+NV V N +I MY+RCG + ++E F
Sbjct: 446 TFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAA 505
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+VSW ++AAF+Q+G Y +AL F +M L G PD +T+ S+L C H G + +
Sbjct: 506 KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGW 565
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
F M +++ + P+++H+ +VD+L R+G+L A ++ + MPFE D W + L AC I
Sbjct: 566 RYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRI 625
Query: 486 NLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYS 545
+ +ELGE AA+++ ELDP ++A Y+ +SN+YAA GMW V VR M+E+G+ K S
Sbjct: 626 HGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLS 685
Query: 546 WIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
+IE+ K+H F G HP D+I EL R M++
Sbjct: 686 FIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRA 722
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 123/516 (23%), Positives = 231/516 (44%), Gaps = 100/516 (19%)
Query: 57 ISALSRAGKISAARQLFDQMT----TKDVITWNAIITGYWQNGFLQESKNLFQSMP--VK 110
+ + S G + R L +++ +D + NA+I+ Y + L +++++F+SM +
Sbjct: 14 LCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQR 73
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT------------------------- 145
N+VSWN MIA N +A + M + T
Sbjct: 74 NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGREIHNRV 133
Query: 146 -----------YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
NA+++ + + G + +A R+F+ + R+ S+ A++ + G D +
Sbjct: 134 FYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSG--DWSG 191
Query: 195 ALSDYMSFK-----NVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITG 247
AL + K N ++ +I+G+ E E R++ + +D ++ V TA+I
Sbjct: 192 ALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINM 251
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K G AR +F++++ +D VS+N MI Y NG EAL L+ + + AT
Sbjct: 252 YGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATF 311
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
VS+ ACS+++ L +GR H ++ G ++ V+V A++ MY++CG + ++ F + +
Sbjct: 312 VSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKN 371
Query: 368 PNLVSWNTIIAAFAQHGHYEKAL-----------------------------------IF 392
+ V+W+T+I A+A +G+ + A IF
Sbjct: 372 RDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIF 431
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT------C 446
G G PD +TF+++L AC G+++E L + I SE +
Sbjct: 432 REMTGAAGLKPDAVTFIAVLEACASLGRLSEVKAL-------HAQISESELESNVVVTNT 484
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+++ +R G LE+A ++ E W +++AA
Sbjct: 485 LINMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAA 519
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 183/352 (51%), Gaps = 8/352 (2%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMP--RRNVISYTAMLDGFMKKGEVDKARALS 197
ER+T NA+IS + K L +A +FE M +RNV+S+ AM+ + + G +A L
Sbjct: 39 ERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLY 98
Query: 198 DYMSFKNVVSWTVMITGYVKN-ERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGML 254
M+ + + + V + + RE+ R+ D + A++T + + G +
Sbjct: 99 WRMNLQGLGTDHVTFVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSV 158
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+A+ +F+ +Q +D S+NA+I ++Q+G ALR+F M K D++P+ T ++V +
Sbjct: 159 GDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGF 217
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
S ++L EGR+ H ++ NGF+ ++ V A+I MY +CG ++ F ++ ++VSWN
Sbjct: 218 STPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWN 277
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I + +G + +AL + ++ + GF TF+S+L AC + + L +
Sbjct: 278 VMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGR-LVHSHILE 336
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
G+ T LV++ ++ G LE+A ++ M D W +L+ A N
Sbjct: 337 RGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASN 387
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 177/419 (42%), Gaps = 52/419 (12%)
Query: 20 ILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTK 79
++ STP+ + + F T V V A I+ + G AR++FD+M +
Sbjct: 213 VISGFSTPEVLPEGRKIHAEIVANGFDTDLV-VATALINMYGKCGSSHEAREVFDKMKKR 271
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYF 135
D+++WN +I Y NG E+ L+Q + ++ ++ ++ C +
Sbjct: 272 DMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVH 331
Query: 136 QAMPERN----TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG--- 188
+ ER A A+++ + K G LEEA ++F M R+ ++++ ++ + G
Sbjct: 332 SHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGK 391
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------PD-------- 233
+ KAR + D + ++ +SW MIT YV+N A ++F M PD
Sbjct: 392 DARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVL 451
Query: 234 -----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ NV V +I + + G LE A LF + K V
Sbjct: 452 EACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVV 511
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVL 329
S+ AM+A ++Q G EAL LF M ++PDD T S+ C+ L +G R +
Sbjct: 512 SWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDM 571
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ A++ + R G + D+ EL P+ V+W T + A HG E
Sbjct: 572 AELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLE 630
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 166/357 (46%), Gaps = 52/357 (14%)
Query: 223 EARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERI--QPKDCVSFNAMIAG 278
E R L R+ ++++ V A+I+ + K L +AR +FE + + ++ VS+NAMIA
Sbjct: 25 EGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAA 84
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
YAQNG + EAL L+ M + D T VSV ACS+L +GR+ H V +G ++
Sbjct: 85 YAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSF 141
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
S+ NA++TMY+R G + D++ F+ + + + SWN +I A +Q G + AL F +M
Sbjct: 142 QSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKC 201
Query: 399 ----------------------------------NGFDPDGITFLSLLSACGHAGKVNES 424
NGFD D + +L++ G G +E+
Sbjct: 202 DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEA 261
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP---FEADTGVWGSLLA 481
++F+ M K + + ++ G +A ++ Q + F+ + S+L
Sbjct: 262 REVFDKMKKRDMV-----SWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILG 316
Query: 482 ACVINLNVELGELAAKKM--RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
AC + G L + R LD + AV L N+YA G + +V MK +
Sbjct: 317 ACSSVKALAQGRLVHSHILERGLDSE-VAVATALVNMYAKCGSLEEARKVFNAMKNR 372
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 7/187 (3%)
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
MD QPD+ T ++V +CS+ + EGR H + + FE + V NA+I+MY +C ++D
Sbjct: 1 MDRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD 60
Query: 358 SELAFRQI--HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F + N+VSWN +IAA+AQ+GH +AL+ + +M L G D +TF+S+L AC
Sbjct: 61 ARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC 120
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ E + V G+ LV + +R G + A ++ Q + +T
Sbjct: 121 SSLAQGREIHN----RVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETS- 175
Query: 476 WGSLLAA 482
W +++ A
Sbjct: 176 WNAVILA 182
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 288/540 (53%), Gaps = 42/540 (7%)
Query: 84 WNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN- 142
+ II + Q L+E+ + +P + ++ +IA C+ + +++ N
Sbjct: 35 FEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNF 94
Query: 143 ---TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
N +I + K G L +A LF+++P++++ S+ M+ G+ G +++AR L D
Sbjct: 95 IPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDE 154
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK---NVF----------------- 239
M ++ SW +I+GYV + EA +LF M + + N+F
Sbjct: 155 MPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRR 214
Query: 240 ------------------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
V TA++ + K G L AR +F+++ KD VS+ MI +
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
+G +E LF ++ ++P++ T V AC+ L G++ H + R G++
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFA 334
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
+A++ +YS+CG + F Q+ P+LVSW ++I +AQ+G + AL FF + +G
Sbjct: 335 ASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGT 394
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
PD ITF+ +LSAC HAG V+ ++ F + + +G++ +++HY C++D+L+R+G+ ++A
Sbjct: 395 KPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAE 454
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
I MP + D +W SLL C I+ N+EL E AAK + EL+P+N A Y+ LSN+YA AG
Sbjct: 455 NIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAG 514
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+W + T+VR M +G+ K+ SWIEI +VH FL GD SHP I IH L S +MK
Sbjct: 515 LWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMK 574
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 213/482 (44%), Gaps = 80/482 (16%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ ++N I ++ G + A+ LFD++ KD+ +WN +I+GY G +++++ LF MP
Sbjct: 98 IVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPH 157
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS---------------GFL 154
++ SWN +I+G + +A D F+ M E ++ N G
Sbjct: 158 RDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKE 217
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
HG L + ++ + +TA+LD + K G +++AR + D M+ K++VSWT MI
Sbjct: 218 IHGYLIRSGLELDE------VVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHR 271
Query: 215 YVKNERFCEARELFYRM------PD-------------------------------YDKN 237
++ R E LF + P+ YD
Sbjct: 272 CFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPF 331
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
F +A++ + K G E AR +F ++ D VS+ ++I GYAQNG + AL+ F +++
Sbjct: 332 SFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLR 391
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+PD+ T V V +AC+ L++ G + H + ++G VI + +R G
Sbjct: 392 SGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFK 451
Query: 357 DSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG-ITFLSLLSA 414
++E + P+ W +++ HG+ E L + L +P+ T+++L +
Sbjct: 452 EAENIIDNMPMKPDKFLWASLLGGCRIHGNIE--LAERAAKALFELEPENPATYITLSNI 509
Query: 415 CGHAG------KVNESMD-----------LFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
+AG KV MD E+ +V+ + + + DI G+L
Sbjct: 510 YANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGEL 569
Query: 458 EK 459
K
Sbjct: 570 SK 571
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/541 (32%), Positives = 290/541 (53%), Gaps = 36/541 (6%)
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIV--SWNCMIAGCIDNDRIDDAFDYFQAM 138
+ +N I + + G L+ + L P ++ ++ ++ C D I D ++
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDG-RRIHSI 126
Query: 139 PERNTATYNAMISG-----FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG----- 188
+ N + ++ ++ G L E R+F+++ V + +++G+ K G
Sbjct: 127 IQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRES 186
Query: 189 -------------EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
V+ AR L D + ++V+SW MI+GYV N + +LF +M
Sbjct: 187 LSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG 246
Query: 236 KNVFVVT----------AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
N + T ++ + K G L +A +FE + + VS+ +MIAGYA+ G++
Sbjct: 247 INTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLS 306
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+ ++RLF M K D+ P+ T+ + AC++L L G++ H ++RNGF + V NA+
Sbjct: 307 DMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANAL 366
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY +CG + + L F I +LVSW +IA + HG+ +A+ F++M +G +PD
Sbjct: 367 VDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDE 426
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
++F+S+L AC H+G ++E F +M I P SEHY C+VD+L+RAG L KA++ +
Sbjct: 427 VSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIK 486
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
MP E D +WG+LL C I +V+L E A+ + EL+P+N+ YV+L+N+YA A W +
Sbjct: 487 MMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEE 546
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDD 585
V ++R + +G+ K SWIEI KVH F+ GD SHP +KI L LK+ +MK
Sbjct: 547 VKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGH 606
Query: 586 F 586
F
Sbjct: 607 F 607
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 193/455 (42%), Gaps = 105/455 (23%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G + R++FD++ + V WN ++ GY + G +ES +LF+ M I
Sbjct: 150 GDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGI----------- 198
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA---- 179
R++ A F + +R+ ++N+MISG++ +G E+ LFEQM + + A
Sbjct: 199 --RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVS 256
Query: 180 --------MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
+LD + K G ++ A + + M ++VVSWT MI GY + + LF+ M
Sbjct: 257 VELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEM 316
Query: 232 PDYD--------------------------------KNVF-----VVTAMITGFCKVGML 254
D +N F V A++ + K G L
Sbjct: 317 EKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGAL 376
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
ARLLF+ I KD VS+ MIAGY +G EA+ F+ M ++PD+ + +S+ AC
Sbjct: 377 GLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYAC 436
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
S LL+EG GF N+ N I P +
Sbjct: 437 SHSGLLDEGW---------GF-FNMMRNNCCI--------------------EPKSEHYA 466
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG--HAGKVNESM--DLFEL 430
I+ A+ G+ KA F M + +PD + +LL C H K+ E + +FEL
Sbjct: 467 CIVDLLARAGNLSKAYKFIKMMPI---EPDATIWGALLCGCRIYHDVKLAEKVAEHVFEL 523
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
+ G +Y L +I + A + E+ ++ +
Sbjct: 524 EPENTG------YYVLLANIYAEAEKWEEVKKLRE 552
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 28/239 (11%)
Query: 268 DC--VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
DC +N I + + G A+ L + K D++ T SV C+ L+ + +GR+
Sbjct: 65 DCKITDYNIEICRFCELGNLRRAMELINQSPKPDLEL--RTYCSVLQLCADLKSIQDGRR 122
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H ++ N E + + + ++ MY CG + + F ++ + + WN ++ +A+ G+
Sbjct: 123 IHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGN 182
Query: 386 YEKALIFFSQMGLNGF--------------DPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ ++L F +M G D D I++ S++S G + +DLFE M
Sbjct: 183 FRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQM 242
Query: 432 VKVYGI------IPSSEHY--TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + GI + S E CL+D+ S++G L A Q+ + M E W S++A
Sbjct: 243 L-LLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAG 299
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK- 110
+NN + S++G +++A Q+F+ M + V++W ++I GY + G S LF M +
Sbjct: 261 LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKED 320
Query: 111 ---NIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATYNAMISGFLKHGRLEE 161
N ++ C++ C ++ + + +R+ A NA++ +LK G L
Sbjct: 321 LFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA--NALVDMYLKCGALGL 378
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
A LF+ +P ++++S+T M+ G+ G +A A + M
Sbjct: 379 ARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM 417
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 309/559 (55%), Gaps = 60/559 (10%)
Query: 80 DVITWNAIITGYWQ-NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
DV A+I + + NG L+ + +F MP +N+V+W MI DA D F M
Sbjct: 77 DVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDM 136
Query: 139 ------PERNTATYNAMISGFLKHGRLEEATRLFEQMPRR-----NVISYTAMLDGFMK- 186
P+R T + ++S + G L R F + + +V +++D + K
Sbjct: 137 VLSGYVPDR--FTLSGVVSACAEMGLLSLG-RQFHCLVMKSGLDLDVCVGCSLVDMYAKC 193
Query: 187 --KGEVDKARALSDYMSFKNVVSWTVMITGYVKN---ERFCEARELFYRM------PDY- 234
G VD AR + D M NV+SWT +ITGYV++ +R EA ELF M P++
Sbjct: 194 VADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDR--EAIELFLEMVQGQVKPNHF 251
Query: 235 -----------------DKNVF-------------VVTAMITGFCKVGMLENARLLFERI 264
+ V+ V ++I+ + + G +ENAR F+ +
Sbjct: 252 TFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVL 311
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
K+ VS+N ++ YA++ +EEA LF+ + + T S+ + S++ + +G
Sbjct: 312 FEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGE 371
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H ++++GF++N+ +CNA+I+MYSRCG I + F ++ N++SW ++I FA+HG
Sbjct: 372 QIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHG 431
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
+AL F +M G P+ +T++++LSAC H G ++E + F+ M +GI+P EHY
Sbjct: 432 FATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHY 491
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+VD+L R+G LE+A ++ MPF+AD V + L AC ++ N++LG+ AA+ + E DP
Sbjct: 492 ACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDP 551
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
+ A Y++LSNL+A+AG W +V +R MKE+ +TK+ SWIE+ NKVH F GD SHP
Sbjct: 552 HDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHP 611
Query: 565 CIDKIHLELKRASVQMKSV 583
+I+ EL + ++++K +
Sbjct: 612 QAQEIYDELDQLALKIKEL 630
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 205/424 (48%), Gaps = 22/424 (5%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDY 134
+D+++W+A+I+ Y N E+ + F M N + + C + + I
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 135 FQAMP-----ERNTATYNAMISGFLK-HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
F + E + A+I F+K +G LE A ++F++MP RNV+++T M+ F + G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 189 EVDKA------RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
A LS Y+ + +S V + D +V V
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 243 AMITGFCKV---GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE-EALRLFSGMIKM 298
+++ + K G +++AR +F+R+ + +S+ A+I GY Q+G + EA+ LF M++
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++P+ T SV AC+ L + G Q + LV++ + V N++I+MYSRCG + ++
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENA 304
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
AF + NLVS+NTI+ A+A+ + E+A F+++ G + TF SLLS
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSI 364
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G + + + ++K G + L+ + SR G +E A+Q+ M + + W S
Sbjct: 365 GAIGKGEQIHSRILKS-GFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWTS 422
Query: 479 LLAA 482
++
Sbjct: 423 MITG 426
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 160/331 (48%), Gaps = 45/331 (13%)
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPD----------------------------- 233
+++VSW+ +I+ Y NE+ EA F+ M +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 234 ---------YDKNVFVVTAMITGFCKV-GMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
++ +V V A+I F K G LE+A +F+R+ ++ V++ MI + Q G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+ +A+ LF M+ PD TL V +AC+ + LL+ GRQ H LV+++G + +V V
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 344 AVITMYSRC---GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK-ALIFFSQMGLN 399
+++ MY++C G + D+ F ++ N++SW II + Q G ++ A+ F +M
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
P+ TF S+L AC + + ++ L+VK+ + + L+ + SR G +E
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMR-LASINCVGNSLISMYSRCGNMEN 303
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVE 490
A + + FE + + +++ A +LN E
Sbjct: 304 ARKAFDVL-FEKNLVSYNTIVNAYAKSLNSE 333
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---- 107
+ NA IS SR G I AA Q+F++M +VI+W ++ITG+ ++GF + F M
Sbjct: 388 ICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAG 447
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
N V++ +++ C I + +F++M + Y ++ + G LEEA
Sbjct: 448 VSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEA 507
Query: 163 TRLFEQMP 170
L MP
Sbjct: 508 MELVNSMP 515
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK- 110
V N+ IS SR G + AR+ FD + K+++++N I+ Y ++ +E+ LF +
Sbjct: 287 VGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAG 346
Query: 111 ---NIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEAT 163
N ++ +++G I ++ + N NA+IS + + G +E A
Sbjct: 347 TGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAF 406
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
++F +M NVIS+T+M+ GF K G +A
Sbjct: 407 QVFNEMGDGNVISWTSMITGFAKHGFATRA 436
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 189/634 (29%), Positives = 315/634 (49%), Gaps = 80/634 (12%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR F++N + A + AR++FD + ++ +WN ++ Y ++G L E
Sbjct: 29 IIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEM 88
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER--------------NTATY 146
+ F+ +P ++ V+WN +I G + + A + M + ++
Sbjct: 89 ERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSS 148
Query: 147 NAMIS------------GF--------------LKHGRLEEATRLFEQMPRRNVISYTAM 180
N +S GF K G + +A ++F + RN + Y +
Sbjct: 149 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTL 208
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP-------- 232
+ G + G ++ A L M K+ VSW+ MI G +N EA E F M
Sbjct: 209 MGGLLACGMIEDALQLFRGME-KDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQ 267
Query: 233 -----------------------------DYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+ +++V +A+I +CK L A+ +F+R
Sbjct: 268 YPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDR 327
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++ K+ VS+ AM+ GY Q G A EA+++F M + + PD TL +AC+ + L EG
Sbjct: 328 MKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEG 387
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
Q H I G ++V N+++T+Y +CG I DS F +++ + VSW +++A+AQ
Sbjct: 388 SQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQF 447
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +A+ F +M G PDG+T ++SAC AG V + FELM+ YGI+PS+ H
Sbjct: 448 GRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGH 507
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y+C++D+ SR+G++E+A GMPF D W +LL+AC N+E+G+ AA+ + ELD
Sbjct: 508 YSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELD 567
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P + A Y +LS++YA+ G W V ++R MKE+ V K+ SWI+ K+H F D S
Sbjct: 568 PHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESS 627
Query: 564 PCIDKIHLELKRASVQMKSVDDFVEIATSWSSFD 597
P D+I+ +L+ + K +D+ + TS+ D
Sbjct: 628 PYSDQIYAKLEE--LYQKIIDNGYKPDTSFVHHD 659
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C+IR +++V +A I + + A+ +FD+M K+V++W A++ GY Q G E
Sbjct: 292 CIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGE 351
Query: 100 SKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMIS 151
+ +F M I + I+ C + +++ + Y N++++
Sbjct: 352 AVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVT 411
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ K G ++++TRLF +M R+ +S+TA M
Sbjct: 412 LYGKCGDIDDSTRLFNEMNVRDEVSWTA-------------------------------M 440
Query: 212 ITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFE------R 263
++ Y + R EA +LF +M + +T +I+ + G++E + FE
Sbjct: 441 VSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYG 500
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
I P + ++ MI ++++G EEA+ +G M +PD ++ +AC
Sbjct: 501 IVPSNG-HYSCMIDLFSRSGRIEEAMGFING---MPFRPDAIGWTTLLSAC 547
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 14/231 (6%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C L + H +IR + N ++ Y+ + + F I PNL SW
Sbjct: 13 CIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSW 72
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N ++ A+++ GH + F ++ D DG+T+ L+ +G V ++ + M+K
Sbjct: 73 NNLLLAYSKSGHLSEMERTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMK 128
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ---GMPFEADTGVWGSLLAACVINLNVE 490
+ + ++ + S G + QI + FE+ L+ + ++++ +
Sbjct: 129 DFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYL-----LVGSPLLDMYSK 183
Query: 491 LGEL--AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
+G + A K LD +N+ +Y L A GM D ++ M++ V+
Sbjct: 184 VGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVS 234
>gi|345505206|gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
Length = 594
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 267/476 (56%), Gaps = 23/476 (4%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA 148
TG W + FLQ NC+I + + A F MP+R++ +YN+
Sbjct: 130 TGIWSDLFLQ-----------------NCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNS 172
Query: 149 MISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNV 205
MI G++K G ++ A +LF+ MPR +N+IS+ +M+ G+ + + ++ A L M K++
Sbjct: 173 MIDGYVKCGLMKSAHKLFDLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEMPEKDL 232
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+SW MI G VK+ R +A+ LF MP D V MI G+ K+G + +A+ LF+++
Sbjct: 233 ISWNSMINGCVKHGRIEDAKGLFDVMPRRD--VVTWATMIDGYAKLGFVHHAKSLFDQMH 290
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGR 324
+D V+ N+M+AGY QN EAL +F+ M K + PD+ TLV V +A + L L++
Sbjct: 291 QRDVVACNSMMAGYVQNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSKAM 350
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
HV ++ F + A+I M+S+CG I + F I + ++ WN +I A HG
Sbjct: 351 SMHVYIVEKRFPLGGKLGVALIDMHSKCGSIQHAISVFEGIENKSIDHWNAMIGGLAIHG 410
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P +HY
Sbjct: 411 LGELAFDMLMQIERCSIQPDXITFIGVLNACSHSGLVKEGLLCFELMRRKHXIEPRLQHY 470
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
CLVD+LSR+G +E A + + MP E + +W S L+AC + E GEL AK +
Sbjct: 471 GCLVDVLSRSGSIELAKHLIEDMPMEPNDVIWRSFLSACSTHEEFETGELVAKHLILQAG 530
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
N + YV+LSN+YA+ GMW+DV RVR++MK++ + K SWIE+ VH F D
Sbjct: 531 YNPSSYVLLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWIELDGNVHEFFVQD 586
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 208/408 (50%), Gaps = 50/408 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + ARQ+FD+M +D +++N++I GY + G ++ + LF MP
Sbjct: 136 LFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLMKSAHKLFDLMPR 195
Query: 109 -VKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+KN++SWN MI+G D ++ A F MPE++ ++N+MI+G +KHGR+E+A LF
Sbjct: 196 EIKNLISWNSMISGYAQTADGLNTASKLFSEMPEKDLISWNSMINGCVKHGRIEDAKGLF 255
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ MPRR+V+++ M+DG+ K G V A++L D M ++VV+ M+ GYV+N+ EA E
Sbjct: 256 DVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNSMMAGYVQNKYHMEALE 315
Query: 227 LFYRM-------PDYDKNVFVVT-------------------------------AMITGF 248
+F M PD V V++ A+I
Sbjct: 316 IFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMHVYIVEKRFPLGGKLGVALIDMH 375
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G +++A +FE I+ K +NAMI G A +G+ E A + + + +QPD T +
Sbjct: 376 SKCGSIQHAISVFEGIENKSIDHWNAMIGGLAIHGLGELAFDMLMQIERCSIQPDXITFI 435
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SR G I ELA I
Sbjct: 436 GVLNACSHSGLVKEGLLCFELMRRKHXIEPRLQHYGCLVDVLSRSGSI---ELAKHLIED 492
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLS 410
PN V W + ++A + H +E + + L G++P LS
Sbjct: 493 MPMEPNDVIWRSFLSACSTHEEFETGELVAKHLILQAGYNPSSYVLLS 540
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 141/303 (46%), Gaps = 32/303 (10%)
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F R ++F+ +I + K G L AR +F+R+ +D VS+N+MI GY + G+ +
Sbjct: 126 FLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLMKS 185
Query: 288 ALRLF-------------SGMIKMDMQPDDA--TLVSVFTACSALQLLNEGRQSHVLVIR 332
A +LF + MI Q D T +F+ L++ + V
Sbjct: 186 AHKLFDLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEMPEKDLISWNSMINGCVKH 245
Query: 333 NGFE-----------ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
E +V +I Y++ G + ++ F Q+H ++V+ N+++A +
Sbjct: 246 GRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNSMMAGYV 305
Query: 382 QHGHYEKALIFFSQMGLNG-FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
Q+ ++ +AL F+ M + PD T + +LSA G+++++M + +V+ +
Sbjct: 306 QNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMHVYIVEKRFPL-G 364
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
+ L+D+ S+ G ++ A + +G+ ++ W +++ I+ LGELA +
Sbjct: 365 GKLGVALIDMHSKCGSIQHAISVFEGIENKS-IDHWNAMIGGLAIH---GLGELAFDMLM 420
Query: 501 ELD 503
+++
Sbjct: 421 QIE 423
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 131/293 (44%), Gaps = 51/293 (17%)
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F + +D +NA+I Y+ AL LF MI+ + D +L V ACS L+ L
Sbjct: 58 FSAGEGEDPYLWNAVIKSYSHGIDPRRALLLFCLMIENGVCVDKFSLSLVLKACSRLEFL 117
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG--------------------------- 353
EG Q H + + G +++ + N +I +Y +CG
Sbjct: 118 KEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGY 177
Query: 354 ---GILDS-----ELAFRQIHSPNLVSWNTIIAAFAQHGH-YEKALIFFSQMGLNGFDPD 404
G++ S +L R+I NL+SWN++I+ +AQ A FS+M + D
Sbjct: 178 VKCGLMKSAHKLFDLMPREI--KNLISWNSMISGYAQTADGLNTASKLFSEMP----EKD 231
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
I++ S+++ C G++ ++ LF++M + + + ++D ++ G + A +
Sbjct: 232 LISWNSMINGCVKHGRIEDAKGLFDVMPRRDVVT-----WATMIDGYAKLGFVHHAKSLF 286
Query: 465 QGMPFEADTGVWGSLLAACVIN-LNVELGEL--AAKKMRELDPQNSAVYVMLS 514
M + D S++A V N ++E E+ +K L P + + ++LS
Sbjct: 287 DQM-HQRDVVACNSMMAGYVQNKYHMEALEIFNDMEKDSHLSPDETTLVIVLS 338
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 197/651 (30%), Positives = 320/651 (49%), Gaps = 116/651 (17%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q F++ ++ + G +S +R FDQ+ KDV TWN++I+ Y +NG +E+ + F +
Sbjct: 106 QSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQL 165
Query: 108 --------------PV------------------KNIVSWNCMIAGCIDN-----DRIDD 130
PV K W+ +A + + +
Sbjct: 166 LLVTKFQADFYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGI 225
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR--NVISYT---------- 178
A F MP R+ ++NAMISG +++G +A + ++M N+ S T
Sbjct: 226 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQ 285
Query: 179 ---------------------------AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
A+++ + K G + A+ + M ++VVSW +
Sbjct: 286 LGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSI 345
Query: 212 ITGYVKNERFCEARELFYRMP----------------------DYDKN------------ 237
I Y +N+ AR F++M DY +
Sbjct: 346 IAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGW 405
Query: 238 ----VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
V + A++ + K+G++++A +F I KD VS+N +I+GY QNG+A EA+ ++
Sbjct: 406 LMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYR 465
Query: 294 GMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M + +++ + T VS+ A + + L +G + H +I+ +V V +I +Y +C
Sbjct: 466 MMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKC 525
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G ++D+ F Q+ + V WN II+ HGH EKAL F +M G PD +TF+SLL
Sbjct: 526 GRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLL 585
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SAC H+G V+E F LM + YGI PS +HY C+VD+L RAG LE A+ + MP D
Sbjct: 586 SACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPD 644
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
+WG+LL AC I+ N+ELG+ A+ ++ E+D +N YV+LSN+YA G W V +VR L
Sbjct: 645 ASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSL 704
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+E+G+ K +S IE+ +V F G+ SHP +I+ EL+ + +MKS+
Sbjct: 705 ARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSL 755
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
S+F +C+ L ++ H L++ +G + + ++ +Y+ G + S F QI
Sbjct: 81 SLFDSCTKTLL---AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRK 137
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGL-NGFDPDGITFLSLLSACGHAGKVNESMDL 427
++ +WN++I+A+ ++GH+ +A+ F Q+ L F D TF +L AC +D
Sbjct: 138 DVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC------QTLVDG 191
Query: 428 FELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
++ V+ + + + L+ + SR G + A + MPF D G W ++++ +
Sbjct: 192 RKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFR-DMGSWNAMISGLIQ 250
Query: 486 NLNVELGELAAKKMR 500
N N +MR
Sbjct: 251 NGNAAQALDVLDEMR 265
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 269/462 (58%), Gaps = 43/462 (9%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV 205
+ ++IS + ++GRLE+A ++F+ R+V+SYTA++ G++ +G ++ A+ L D + K+V
Sbjct: 127 HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDV 186
Query: 206 VSWTVMITGYVKNERFCEARELFYRM-------PD------------------------- 233
VSW MI+GYV+ + EA ELF M PD
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHS 246
Query: 234 ------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
+ N+ +V A+I + K G +E A LF+ + KD +S+N +I GY + +E
Sbjct: 247 WINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKE 306
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN--GFEANVS-VCNA 344
AL LF M++ P+D T++S+ AC+ L ++ GR HV + + G NVS + +
Sbjct: 307 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTS 366
Query: 345 VITMYSRCGGILDSELAF-RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
+I MY++CG I ++ F + + +L +WN +I+ FA HG A FS+M +NG +P
Sbjct: 367 LIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEP 426
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
D ITF+ LLSAC H+G ++ ++F M + Y I P EHY C++D+L +G ++A ++
Sbjct: 427 DDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEM 486
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW 523
MP E D +W SLL AC I+ N+ELGE AKK+ +++P NS YV+LSN+YAAAG W
Sbjct: 487 INTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRW 546
Query: 524 RDVTRVRLLMKEQGVTKQC-AYSWIEIGNKVHYFLGGDMSHP 564
+V ++R L+ ++G+ K+ S IEI + VH F+ GD HP
Sbjct: 547 NEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHP 588
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 133/544 (24%), Positives = 242/544 (44%), Gaps = 101/544 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ + IS ++ G++ AR++FD + +DV+++ A+I GY G+++ ++ LF +P
Sbjct: 124 IYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPG 183
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAMISGFLKHGRLEEA 162
K++VSWN MI+G ++ +A + F+ M P+ +T ++S + +E
Sbjct: 184 KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMV--TVVSACAQSDSIELG 241
Query: 163 TRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
+ + N+ A++D + K GEV+ A L D + K+V+SW +I GY
Sbjct: 242 RHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHM 301
Query: 219 ERFCEARELFYRM------P------------------DYDKNVFVV------------- 241
+ EA LF M P D + + V
Sbjct: 302 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVS 361
Query: 242 ---TAMITGFCKVGMLENARLLFE-RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
T++I + K G ++ A+ +F+ + + ++NAMI+G+A +G A A +FS M
Sbjct: 362 SLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRM 421
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
++PDD T V + +ACS +L+ GR + R G+E
Sbjct: 422 NGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTR-GYEI-------------------- 460
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+P L + +I G +++A + M + +PDG+ + SLL AC
Sbjct: 461 ---------TPKLEHYGCMIDLLGHSGLFKEAEEMINTMPM---EPDGVIWCSLLKAC-- 506
Query: 418 AGKVNESMDLFE-LMVKVYGIIP-SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
K++ +++L E K+ I P +S Y L +I + AG+ + +I + D G+
Sbjct: 507 --KIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALL---NDKGM 561
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVY---VMLSNLYAAAGMWRDVTRVRLL 532
+ I ++ + E +L PQN +Y + L AG D + V
Sbjct: 562 KKKVPGCSSIEIDSVVHEFIIGD--KLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQE 619
Query: 533 MKEQ 536
M+E+
Sbjct: 620 MEEE 623
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 160/317 (50%), Gaps = 36/317 (11%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE------- 286
+D +++V T++I+ + + G LE+AR +F+ +D VS+ A+IAGY G E
Sbjct: 120 FDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFD 179
Query: 287 ------------------------EALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLN 321
EAL LF M+ M +++PD++T+V+V +AC+ +
Sbjct: 180 EIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIE 239
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
GR H + +GF +N+ + NA+I +YS+ G + + F + + +++SWNT+I +
Sbjct: 240 LGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYT 299
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM-VKVYGIIPS 440
Y++AL+ F +M +G P+ +T LS+L AC H G ++ + + K+ G++ +
Sbjct: 300 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTN 359
Query: 441 -SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN--LNVELGELAAK 497
S T L+D+ ++ G ++ A Q+ W ++++ ++ N +
Sbjct: 360 VSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRM 419
Query: 498 KMRELDPQNSAVYVMLS 514
+M ++P + +LS
Sbjct: 420 RMNGIEPDDITFVGLLS 436
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 140/296 (47%), Gaps = 37/296 (12%)
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F+ IQ + + +N M G+A + AL+L+ MI + + PD T + +C+ ++
Sbjct: 45 VFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKI 104
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD---------------------- 357
EG+Q H V++ GF+ ++ V ++I+MY++ G + D
Sbjct: 105 RKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAG 164
Query: 358 ---------SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ-MGLNGFDPDGIT 407
++ F +I ++VSWN +I+ + + G+Y++AL F + M + PD T
Sbjct: 165 YVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDEST 224
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
++++SAC + + + + +G + + L+D+ S+ G++E A ++ G+
Sbjct: 225 MVTVVSACAQSDSIELGRHVHS-WINDHGFASNLKIVNALIDLYSKFGEVETACELFDGL 283
Query: 468 PFEADTGVWGSLLAACV-INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ D W +L+ +NL E L + +R + N MLS L A A +
Sbjct: 284 -WNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV--TMLSILPACAHL 336
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 302/546 (55%), Gaps = 24/546 (4%)
Query: 57 ISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV-- 113
I+ S+ +++ A +F T + +V +NAII+G+ NGF +E +Q M + ++
Sbjct: 79 INMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPD 138
Query: 114 --SWNCMIAGCIDNDRIDDAFDY-FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
++ C I C+D I F+ E + +A+++ +LK G +E A FE++P
Sbjct: 139 KFTFPCAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP 198
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV---------KNERF 221
R+V+ + AM++G+ + G+ + M+ ++VV +TG + N R
Sbjct: 199 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRI 258
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
F YD V V ++I + K +E+A +FE ++ KD S+N++++ + Q
Sbjct: 259 IHG---FAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQ 315
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN--- 338
G + LRL M+ +QPD T+ +V ACS L L GR+ H +I +G +
Sbjct: 316 CGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKD 375
Query: 339 ---VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
V + NAVI MY++CG + D+ L F ++ + ++ SWN +I + HG+ +AL FS+
Sbjct: 376 IDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSR 435
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M PD +TF+ +LSAC HAG V++ + M Y + P+ EHYTC++D+L RAG
Sbjct: 436 MCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAG 495
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
QL++A+++ MP EA+ VW +LLAAC ++ + L E+AA+++ EL+P++ YV++SN
Sbjct: 496 QLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSN 555
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+Y A G + +V VR M++Q V K SWIE+ N VH F+ D +HP I+ L
Sbjct: 556 VYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNS 615
Query: 576 ASVQMK 581
+ +++
Sbjct: 616 LTARLR 621
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 174/361 (48%), Gaps = 28/361 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+ +A ++ + G + A+ F+++ +DV+ WNA++ GY Q G + F+ M
Sbjct: 171 VFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMND 230
Query: 110 KNIVSWNCMIAGC---------IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+++V + G ++N RI F + + A N++I + K +E
Sbjct: 231 ESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFA-MKMGYDSGVAVSNSLIDMYGKCKCIE 289
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYV 216
+A +FE M +++ S+ +++ + G+ D L D M + V+ T ++
Sbjct: 290 DALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACS 349
Query: 217 KNERFCEARELFYRM---------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
RE+ M D D +V + A+I + K G + +A L+FER+ K
Sbjct: 350 HLAALMHGREIHGYMIVSGLGKDGKDID-DVLLKNAVIDMYAKCGSMRDAHLVFERMSNK 408
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D S+N MI GY +G EAL +FS M ++ ++PD+ T V V +ACS +++GR +
Sbjct: 409 DVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR-NF 467
Query: 328 VLVIRNGFEANVSV--CNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHG 384
++ +++ ++ ++ VI M R G + ++ ELA N V W ++AA H
Sbjct: 468 LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHK 527
Query: 385 H 385
H
Sbjct: 528 H 528
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 293 SGMIKMDMQPDD-ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
S I+ QP + T ++ A + + L++G++ H ++ NGF + ++I MYS+
Sbjct: 25 STAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSK 84
Query: 352 CGGILDSELAFRQ-IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
C + + F H N+ ++N II+ F +G E+ F+ +M G PD TF
Sbjct: 85 CNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPC 144
Query: 411 LLSACGHAGKVNESMD-LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
+ AC ++ + LF+ +++ I S+ LV+ + G +E A + +P
Sbjct: 145 AIKACLDVLEIKKIHGLLFKFGLELDVFIGSA-----LVNCYLKFGLMEHAQVAFEELPI 199
Query: 470 EADTGVWGSLL 480
D +W +++
Sbjct: 200 R-DVVLWNAMV 209
>gi|224126355|ref|XP_002329533.1| predicted protein [Populus trichocarpa]
gi|222870242|gb|EEF07373.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 186/565 (32%), Positives = 301/565 (53%), Gaps = 47/565 (8%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA ++ L + + AR++FD++ K+V++WNA+I G+ +NG ++E++ LF+ M +N++
Sbjct: 130 NAMVAGLIKNEDLEEARRVFDEIPEKNVVSWNAMIKGFAENGKMEEARVLFEEMEDRNVI 189
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+W MIAG + +A+ +F +PERN ++ AMISGF +G EA LF +M RR+
Sbjct: 190 TWTTMIAGYCRIGDVREAYCFFCRIPERNVVSWTAMISGFTWNGYYGEALLLFLEMKRRS 249
Query: 174 VISYTAM----------------------------------LDGFMKKGEVD-----KAR 194
I+ DG + K + A
Sbjct: 250 NIAPNGETFISLAYACAGMRFHHLGKQLHAQLIINGLEYEDYDGRIAKSLIHMYSLFGAM 309
Query: 195 ALSDYMSFKNVVSWTV-----MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
+ Y+ KN+ S V MI GY + + +ARELF +P D + T+MI G+
Sbjct: 310 DYAHYVFNKNLNSHAVQSCNHMINGYTRIGQVEKARELFDTIPARDNITW--TSMIVGYF 367
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
+G + A LFE + KD V++ +MI+G QN + +A M+ P +T
Sbjct: 368 DIGNVSEACYLFENMPDKDSVAWTSMISGLVQNELFLKATSFLLRMLAHGAPPLSSTYAI 427
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+F A A+ L+ GRQ H ++++ + ++ + N++I+MY++CG I D+ F + +
Sbjct: 428 LFGAAGAIAHLDFGRQLHNMLMKTLSDCDLILSNSLISMYAKCGEIHDAYSIFTNMIYRD 487
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
L+SWNT+I A H + L F M +G P+ +TFL +LSAC HAG V++ LF+
Sbjct: 488 LISWNTMIMGLAHHALANETLKVFETMLQSGTRPNSVTFLGILSACSHAGLVSQGCKLFK 547
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC-VINLN 488
M VY I P EHY ++++L RAG++ +A ++ G+PFE + +WG+LL C V N
Sbjct: 548 AMRDVYAIQPGLEHYISMINLLGRAGKVREAEELILGLPFETNHAIWGALLGVCGVAEKN 607
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
++ + AA+++ ELDP N+ +V L N+YAA G + ++R M +GV K SWI
Sbjct: 608 ADIAQHAARRLLELDPLNAPAHVALCNIYAACGKHIEEQKLRKEMGLKGVRKVPGCSWIV 667
Query: 549 IGNKVHYFLGGDMSHPCIDKIHLEL 573
+ V FL GD P D++ L L
Sbjct: 668 LNGNVCVFLSGDKLDPEADEMLLFL 692
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 212/376 (56%), Gaps = 15/376 (3%)
Query: 65 KISAARQLFDQMTTKD----VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA 120
K+ AR L D+ + + W +++T Y + GF+ ES+ LF MP +NIVS+N M++
Sbjct: 13 KLQQARNLLDKFPERSRHSRIAHWTSLLTKYSRIGFIDESRVLFDIMPERNIVSYNVMLS 72
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
G + R+ +A F+ MPERN ++ +M+ G GR+ EA LF++MP RNV+S+ AM
Sbjct: 73 GYLQCGRLSEARGLFEEMPERNVVSWTSMLCGLADAGRICEARELFKEMPERNVVSWNAM 132
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
+ G +K ++++AR + D + KNVVSW MI G+ +N + EAR LF M D+NV
Sbjct: 133 VAGLIKNEDLEEARRVFDEIPEKNVVSWNAMIKGFAENGKMEEARVLFEEME--DRNVIT 190
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-D 299
T MI G+C++G + A F RI ++ VS+ AMI+G+ NG EAL LF M + +
Sbjct: 191 WTTMIAGYCRIGDVREAYCFFCRIPERNVVSWTAMISGFTWNGYYGEALLLFLEMKRRSN 250
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE---ANVSVCNAVITMYSRCGGIL 356
+ P+ T +S+ AC+ ++ + G+Q H +I NG E + + ++I MYS G +
Sbjct: 251 IAPNGETFISLAYACAGMRFHHLGKQLHAQLIINGLEYEDYDGRIAKSLIHMYSLFGAMD 310
Query: 357 DSELAF-RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F + ++S + S N +I + + G EKA F + D IT+ S++
Sbjct: 311 YAHYVFNKNLNSHAVQSCNHMINGYTRIGQVEKARELFDTIPAR----DNITWTSMIVGY 366
Query: 416 GHAGKVNESMDLFELM 431
G V+E+ LFE M
Sbjct: 367 FDIGNVSEACYLFENM 382
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
+F N L++ S + ++N+ IS ++ G+I A +F M +D+I+WN +I G
Sbjct: 439 DFGRQLHNMLMKTLSDCDLILSNSLISMYAKCGEIHDAYSIFTNMIYRDLISWNTMIMGL 498
Query: 92 WQNGFLQESKNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERN 142
+ E+ +F++M N V++ +++ C + F+AM +
Sbjct: 499 AHHALANETLKVFETMLQSGTRPNSVTFLGILSACSHAGLVSQGCKLFKAMRDVYAIQPG 558
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMP 170
Y +MI+ + G++ EA L +P
Sbjct: 559 LEHYISMINLLGRAGKVREAEELILGLP 586
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 305/544 (56%), Gaps = 12/544 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQ---- 105
VFV N+ ++ ++ G + A+ +F+ M T+D+++WN ++ G N E+ LF
Sbjct: 236 VFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRA 295
Query: 106 SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEE 161
+M ++ +I C + ++ A + + A+ + K G L +
Sbjct: 296 TMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELAD 355
Query: 162 ATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
A +F RNV+S+TA++ G ++ G++ A L M V+ + +K
Sbjct: 356 ALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASL 415
Query: 221 FCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
++ ++ +Y V TA++ + K G E+A +F+ I+ KD V+++AM++
Sbjct: 416 SILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSC 475
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL-LNEGRQSHVLVIRNGFEA 337
+AQ G E A LF+ M ++P++ T+ SV AC+ +++GRQ H + I+ +
Sbjct: 476 HAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHD 535
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ V +A+++MYSR G I +++ F + +LVSWN++I+ +AQHG+ KA+ F QM
Sbjct: 536 AICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQME 595
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
+G DG+TFL+++ C H G V E F+ MV+ + I P+ EHY C+VD+ SRAG+L
Sbjct: 596 ASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKL 655
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
++ + + MPF A VW +LL AC ++ NVELG+ +A K+ L+P +S+ YV+LSN+Y
Sbjct: 656 DETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIY 715
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
AAAG W++ VR LM + V K+ SWI+I NKVH F+ D SHP D+I+ +LK
Sbjct: 716 AAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVII 775
Query: 578 VQMK 581
++K
Sbjct: 776 TRLK 779
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 219/489 (44%), Gaps = 62/489 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQM---------TTKDVITWNAIITGYWQNGFLQES 100
V V++A +S + +A + R L +Q+ +V +++ Y + G + E
Sbjct: 95 VLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEG 154
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKH 156
+F+ MP KN+V+W ++ GC + F M N T+ +++S
Sbjct: 155 IEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQ 214
Query: 157 GRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
G L+ R+ Q R +V ++++ + K G V+ A+++ ++M +++VSW ++
Sbjct: 215 GALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLM 274
Query: 213 TGYVKNERFCEARELFYR----MPDYDKNVF----------------------------- 239
G NE EA +LF+ M ++ +
Sbjct: 275 AGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFH 334
Query: 240 ----VVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
V+TA+ + K G L +A +F ++ VS+ A+I+G QNG A+ LFS
Sbjct: 335 LTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSR 394
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + + P++ T ++ A +L +L Q H VI+ ++ SV A++ YS+ G
Sbjct: 395 MREDRVMPNEFTYSAMLKA--SLSILPP--QIHAQVIKTNYQHIPSVGTALLASYSKFGS 450
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
D+ F+ I ++V+W+ +++ AQ G E A F++M + G P+ T S++ A
Sbjct: 451 TEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDA 510
Query: 415 CG-HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
C + V++ + +K Y + + LV + SR G ++ A QI + D
Sbjct: 511 CACPSAGVDQGRQFHAISIK-YRYHDAICVSSALVSMYSRKGNIDSA-QIVFERQTDRDL 568
Query: 474 GVWGSLLAA 482
W S+++
Sbjct: 569 VSWNSMISG 577
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 175/405 (43%), Gaps = 61/405 (15%)
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM---------PRRNVISYT 178
+ + D F +A +S LK R L EQ+ R V + T
Sbjct: 80 VPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGT 139
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------P 232
+++D +MK G V + + + M KNVV+WT ++TG + E LF+RM P
Sbjct: 140 SLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWP 199
Query: 233 D-------------------------------YDKNVFVVTAMITGFCKVGMLENARLLF 261
+ +VFV +++ + K G++E+A+ +F
Sbjct: 200 NPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVF 259
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
++ +D VS+N ++AG N EAL+LF + +T +V C+ L+ L
Sbjct: 260 NWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLA 319
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAF 380
RQ H V+++GF +V A+ YS+CG + D+ F S N+VSW II+
Sbjct: 320 LARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGC 379
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
Q+G A++ FS+M + P+ T+ ++L A S+ + + I +
Sbjct: 380 IQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA---------SLSILPPQIHAQVIKTN 430
Query: 441 SEHY----TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+H T L+ S+ G E A I + M + D W ++L+
Sbjct: 431 YQHIPSVGTALLASYSKFGSTEDALSIFK-MIEQKDVVAWSAMLS 474
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 129/260 (49%), Gaps = 1/260 (0%)
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
T+++ + K G + +FE + K+ V++ +++ G A + E + LF M +
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P+ T SV +A ++ L+ G++ H ++ G ++V VCN+++ MY++CG + D++
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F + + ++VSWNT++A + +AL F + T+ +++ C + ++
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ L ++K +G + T L D S+ G+L A I + W ++++
Sbjct: 319 ALARQLHSCVLK-HGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIIS 377
Query: 482 ACVINLNVELGELAAKKMRE 501
C+ N ++ L + +MRE
Sbjct: 378 GCIQNGDIPLAVVLFSRMRE 397
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 4/233 (1%)
Query: 256 NARLLFERIQPKDC-VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
AR + I +D V N ++ YA+ G+ E L FS + + D ATL V AC
Sbjct: 50 GARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKAC 109
Query: 315 SALQLLNEGRQSHVLVIRNGFE-ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
++ G Q H L ++ G + VS +++ MY +CG + + F + N+V+W
Sbjct: 110 RSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+++ A + + + F +M G P+ TF S+LSA G ++ + VK
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+G S L+++ ++ G +E A + M D W +L+A +N
Sbjct: 230 -FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLMAGLQLN 280
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 36/275 (13%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDV----ITWNAIITGYWQNGF 96
+ ++ + V +A +S ++AG A LF++M + + T +++I
Sbjct: 457 IFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSA 516
Query: 97 LQESKNLFQSMPVK-----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
+ F ++ +K I + +++ ID A F+ +R+ ++N+MIS
Sbjct: 517 GVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMIS 576
Query: 152 GFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
G+ +HG +A F QM + +++ A++ G G V + + D M + ++
Sbjct: 577 GYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKIN 636
Query: 208 WTV-----MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI----TGFCKV------G 252
T+ M+ Y + + E L MP F AM+ G C+V G
Sbjct: 637 PTMEHYACMVDLYSRAGKLDETMSLIRDMP------FPAGAMVWRTLLGACRVHKNVELG 690
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
+LL ++P D ++ + YA G +E
Sbjct: 691 KFSADKLL--SLEPHDSSTYVLLSNIYAAAGKWKE 723
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 302/546 (55%), Gaps = 24/546 (4%)
Query: 57 ISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV-- 113
I+ S+ +++ A +F T + +V +NAII+G+ NGF +E +Q M + ++
Sbjct: 79 INMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPD 138
Query: 114 --SWNCMIAGCIDNDRIDDAFDY-FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
++ C I C+D I F+ E + +A+++ +LK G +E A FE++P
Sbjct: 139 KFTFPCAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP 198
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK---------NERF 221
R+V+ + AM++G+ + G+ + M+ ++VV +TG + N R
Sbjct: 199 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRI 258
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
F YD V V ++I + K +E+A +FE ++ KD S+N++++ + Q
Sbjct: 259 IHG---FAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQ 315
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN--- 338
G + LRL M+ +QPD T+ +V ACS L L GR+ H +I +G +
Sbjct: 316 CGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKD 375
Query: 339 ---VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
V + NAVI MY++CG + D+ L F ++ + ++ SWN +I + HG+ +AL FS+
Sbjct: 376 IDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSR 435
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M PD +TF+ +LSAC HAG V++ + M Y + P+ EHYTC++D+L RAG
Sbjct: 436 MCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAG 495
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
QL++A+++ MP EA+ VW +LLAAC ++ + L E+AA+++ EL+P++ YV++SN
Sbjct: 496 QLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSN 555
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+Y A G + +V VR M++Q V K SWIE+ N VH F+ D +HP I+ L
Sbjct: 556 VYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNS 615
Query: 576 ASVQMK 581
+ +++
Sbjct: 616 LTARLR 621
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 174/361 (48%), Gaps = 28/361 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+ +A ++ + G + A+ F+++ +DV+ WNA++ GY Q G + F+ M
Sbjct: 171 VFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMND 230
Query: 110 KNIVSWNCMIAGC---------IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+++V + G ++N RI F + + A N++I + K +E
Sbjct: 231 ESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFA-MKMGYDSGVAVSNSLIDMYGKCKCIE 289
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYV 216
+A +FE M +++ S+ +++ + G+ D L D M + V+ T ++
Sbjct: 290 DALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACS 349
Query: 217 KNERFCEARELFYRM---------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
RE+ M D D +V + A+I + K G + +A L+FER+ K
Sbjct: 350 HLAALMHGREIHGYMIVSGLGKDGKDID-DVLLKNAVIDMYAKCGSMRDAHLVFERMSNK 408
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D S+N MI GY +G EAL +FS M ++ ++PD+ T V V +ACS +++GR +
Sbjct: 409 DVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR-NF 467
Query: 328 VLVIRNGFEANVSV--CNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHG 384
++ +++ ++ ++ VI M R G + ++ ELA N V W ++AA H
Sbjct: 468 LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHK 527
Query: 385 H 385
H
Sbjct: 528 H 528
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 158/409 (38%), Gaps = 100/409 (24%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQ----NGFLQESKNLFQ 105
V V+N+ I + I A ++F+ M KD+ +WN+I++ + Q +G L+ +
Sbjct: 272 VAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLG 331
Query: 106 SMPVKNIVSWNCMIAGC--------------------------------IDNDRID---- 129
+ ++V+ ++ C + N ID
Sbjct: 332 AGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAK 391
Query: 130 -----DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAM 180
DA F+ M ++ A++N MI G+ HG EA +F +M + + +++ +
Sbjct: 392 CGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGV 451
Query: 181 LD-----GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
L GF+ +G + S Y + +T +I + + EA EL MP +
Sbjct: 452 LSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMP-IE 510
Query: 236 KNVFVVTAMITGFCKV---GMLEN--ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
N V A++ C++ +L A+ +FE ++P+ C S+ M Y G EE L
Sbjct: 511 ANPVVWRALLAA-CRLHKHAVLAEVAAQRVFE-LEPEHCGSYVLMSNVYGAVGRYEEVLE 568
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
+ M + +++ CS ++L +NG VS A +S
Sbjct: 569 VRHTMRQQNVRKT--------PGCSWIEL------------KNGVHVFVSADRAHPEAHS 608
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
G+ N++ A +HG+ FFS + L+
Sbjct: 609 IYAGL------------------NSLTARLREHGYVPDVFCFFSPLLLD 639
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 293 SGMIKMDMQPDD-ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
S I+ QP + T ++ A + + L++G++ H ++ NGF + ++I MYS+
Sbjct: 25 STAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSK 84
Query: 352 CGGILDSELAFRQ-IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
C + + F H N+ ++N II+ F +G E+ F+ +M G PD TF
Sbjct: 85 CNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPC 144
Query: 411 LLSACGHAGKVNESMD-LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
+ AC ++ + LF+ +++ I S+ LV+ + G +E A + +P
Sbjct: 145 AIKACLDVLEIKKIHGLLFKFGLELDVFIGSA-----LVNCYLKFGLMEHAQVAFEELPI 199
Query: 470 EADTGVWGSLL 480
D +W +++
Sbjct: 200 R-DVVLWNAMV 209
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 201/653 (30%), Positives = 320/653 (49%), Gaps = 115/653 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMP 108
VFV N+ + ++ ++ ARQLFD+M K DV++WN++I+ Y NG E+ LF M
Sbjct: 251 VFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQ 310
Query: 109 ----VKNIVSWNCMIAGCIDND-----------------------------------RID 129
N ++ + C D+ ++
Sbjct: 311 KASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMG 370
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN-------VISYTA--- 179
+A + F M + +T ++N+M+SGF+++G EA + + +M VIS A
Sbjct: 371 EAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASA 430
Query: 180 -----------------------------MLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
++D + K + + D M K+VVSWT
Sbjct: 431 RSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTT 490
Query: 211 MITGYVKNERFCEARELF--YRMPDYDKNVFVVTAMITG--------------------- 247
+I G+ +N A ELF ++ D +V ++++++
Sbjct: 491 IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG 550
Query: 248 -------------FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ + G ++ A +FE I+ KD VS+ +MI+ Y NG+A EAL LF
Sbjct: 551 LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHL 610
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + ++PD +LVS+ +A ++L L +G++ H +IR GF S+ + ++ MY+RCG
Sbjct: 611 MKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGT 670
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ S F I + +LV W ++I A+ HG A+ F +M PD I F+++L A
Sbjct: 671 LEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYA 730
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H+G +NE E M Y + P EHY CLVD+L RA LE+A+Q +GM E
Sbjct: 731 CSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAE 790
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VW +LL AC I+ N ELGE+AA+K+ E+DP+N YV++SN+YAA W+DV VR+ MK
Sbjct: 791 VWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMK 850
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFV 587
G+ K SWIE+GNKVH F+ D SHP +I+ +L + + ++ +V
Sbjct: 851 ASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYV 903
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 219/455 (48%), Gaps = 24/455 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF++ + + G + A +LFD M K + TWNA+I Y NG S L++ M V
Sbjct: 150 VFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRV 209
Query: 110 KNI----VSWNCMIAGC-IDNDRIDDAFDYFQAMPERNTA---TYNAMISGFLKHGRLEE 161
I ++ C++ C + DR A + A+ E + N+++ + K L
Sbjct: 210 SGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNG 269
Query: 162 ATRLFEQMPRR-NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI-------- 212
A +LF++MP + +V+S+ +M+ + G+ +A L M ++ T
Sbjct: 270 ARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACE 329
Query: 213 -TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ ++K F A L Y NVFV A+I + + G + A +F + D +S
Sbjct: 330 DSSFIKQGMFIHATVL---KSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTIS 386
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N+M++G+ QNG+ EAL+ + M +PD ++S+ A + G Q H +
Sbjct: 387 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAM 446
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+NG ++++ V N+++ MY++ + + F ++ ++VSW TIIA AQ+G + +AL
Sbjct: 447 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALE 506
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F ++ L G D D + S+L AC ++ ++ +++ + +VD+
Sbjct: 507 LFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIR--KGLSDLVLQNGIVDVY 564
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
G ++ A ++ + + F+ D W S+++ V N
Sbjct: 565 GECGNVDYAARMFELIEFK-DVVSWTSMISCYVHN 598
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+VF+ T ++ + K G L +A LF+ + K ++NAMI Y NG +L L+ M
Sbjct: 149 SVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMR 208
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ D T + AC L+ G + H L I+ G+ + V V N+++ MY++C +
Sbjct: 209 VSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLN 268
Query: 357 DSELAF-RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F R ++VSWN++I+A++ +G +AL F +M P+ TF++ L AC
Sbjct: 269 GARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQAC 328
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHY------TCLVDILSRAGQLEKAWQITQGMPF 469
+ + + M + ++K S +Y L+ + +R G++ +A I M
Sbjct: 329 EDSSFIKQGMFIHATVLK-------SSYYINVFVANALIAMYARFGKMGEAANIFYNMD- 380
Query: 470 EADTGVWGSLLAACVIN 486
+ DT W S+L+ V N
Sbjct: 381 DWDTISWNSMLSGFVQN 397
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 304 DATLVSVFTACSALQLLNEGRQSHV-LVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D SV C + + L+EG+Q H ++ N +V + ++ MY +CG ++D+E F
Sbjct: 114 DEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLF 173
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+ + +WN +I A+ +G +L + +M ++G D TF +L ACG
Sbjct: 174 DGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRR 233
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ L +K G + +V + ++ L A Q+ MP + D W S+++A
Sbjct: 234 CGAEVHGLAIK-EGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISA 292
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 199/629 (31%), Positives = 319/629 (50%), Gaps = 115/629 (18%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF------------------------ 104
R +FD+M K+V++W ++++GY +NG E +L
Sbjct: 158 GRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALAD 217
Query: 105 ----------QSMPVKNIVSW-----NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
+M VKN + N +I + ++ + DA F +M R++ T+N M
Sbjct: 218 ESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIM 277
Query: 150 ISGFLKHGRLEEATRLFEQM-------------------PRRNVISYTAMLD-GFMKKG- 188
I G+ G E ++F +M ++ +++T L G +K G
Sbjct: 278 IGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGY 337
Query: 189 ------------------EVDKA-RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
VD+A + S + NVV+WT MI G+V+N +A +LF
Sbjct: 338 EFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFC 397
Query: 230 RM------PD---------------------------YDKNVFVVTAMITGFCKVG-MLE 255
+M P+ Y+K V TA++ + K G ++E
Sbjct: 398 QMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVE 457
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC- 314
+AR +F I KD V+++AM+ G AQ +E+A+ +F ++K ++P++ T SV AC
Sbjct: 458 SAR-VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACS 516
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
S+ + G+Q H +++G + V +A++TMYS+ G I +E F + ++VSWN
Sbjct: 517 SSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWN 576
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
++I + QHG +KAL F M G D +TF+ +L+AC HAG V E F +M+K
Sbjct: 577 SMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKD 636
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
Y I EHY+C+VD+ SRAG +KA I GMPF A +W +LLAAC ++ N+ELG+L
Sbjct: 637 YHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKL 696
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
AA+K+ L P ++ YV+LSN++A AG W + VR LM E+ V K+ SWIEI N++
Sbjct: 697 AAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIF 756
Query: 555 YFLGGDMSHPCIDKIHLELKRASVQMKSV 583
FL GD+SHP D ++ +L+ S+++K +
Sbjct: 757 SFLAGDVSHPFSDLVYAKLEELSIKLKDM 785
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 223/471 (47%), Gaps = 25/471 (5%)
Query: 29 SCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAII 88
+ GN SS I+ F + F+ + + +S + A QLFD+ KD+ +N ++
Sbjct: 17 TVGNGRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLL 76
Query: 89 TGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGC-IDNDRIDDAFDYFQAMPE--- 140
+ +N +E+ +LF+ + + ++ +C + C + D++ + Q++
Sbjct: 77 FDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFL 136
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
+ + +++ ++K E+ +F++M +NV+S+T++L G+ + G D+ L + M
Sbjct: 137 EDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQM 196
Query: 201 SFKNV--VSWT-VMITGYVKNERFCEARELFYRM---PDYDKNVFVVTAMITGFCKVGML 254
+ V +T + G + +E E + M ++ FV A+I + K M+
Sbjct: 197 QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMV 256
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+A +F+ + +D V++N MI GYA G E ++F M ++ + C
Sbjct: 257 GDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLC 316
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLVSW 373
S + LN +Q H V++NG+E + A++ YS+C + ++ F + N+V+W
Sbjct: 317 SQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTW 376
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF--ELM 431
+I F Q+ + EKA+ F QM G P+ T+ ++L AGK + + +++
Sbjct: 377 TAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL-----AGKPSSLLSQLHAQII 431
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
Y +PS T L+D + G + ++ ++ +P + D W ++L
Sbjct: 432 KAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAMLTG 479
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 202/500 (40%), Gaps = 124/500 (24%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV NA I ++ + A +FD M +D +TWN +I GY GF E +F M +
Sbjct: 241 FVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLA 300
Query: 111 NIVSWNCMI--------------------AGCIDN-------------------DRIDDA 131
+ + G + N +D+A
Sbjct: 301 GVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEA 360
Query: 132 FDYFQ-AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISY--------- 177
F F A N T+ AMI GF+++ E+A LF QM R V +Y
Sbjct: 361 FKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPS 420
Query: 178 ----------------------TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
TA+LD ++K G V ++ + + K++V+W+ M+TG
Sbjct: 421 SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGL 480
Query: 216 VKNERFCEARELFYRM-------------------------PDYDKNVF----------- 239
+ +A E+F ++ ++ K +
Sbjct: 481 AQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNA 540
Query: 240 --VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
V +A++T + K G +E+A +F R + +D VS+N+MI GY Q+G A++AL +F M
Sbjct: 541 LCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQN 600
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGIL 356
+ DD T + V TAC+ L+ EG + ++I++ + + + ++ +YSR G+
Sbjct: 601 QGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSR-AGMF 659
Query: 357 DSELAFRQ----IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSL 411
D + SP + W T++AA H + E + ++ L D G LS
Sbjct: 660 DKAMDIINGMPFPASPTI--WRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSN 717
Query: 412 LSACGHAGKVNESMDLFELM 431
+ A AG E + +LM
Sbjct: 718 IHAV--AGNWEEKAHVRKLM 735
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 188/451 (41%), Gaps = 53/451 (11%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
+DV +++ Y + ++ + +F M +KN+VSW +++G N D+ M
Sbjct: 137 EDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQM 196
Query: 139 P----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYT-----AMLDGFMKKGE 189
N T+ A + G L + E M +N +T A++ ++K
Sbjct: 197 QMEGVNPNGFTF-ATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEM 255
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP----DYDKNVF------ 239
V A A+ D M ++ V+W +MI GY + E ++F+RM + VF
Sbjct: 256 VGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKL 315
Query: 240 ---------------------------VVTAMITGFCKVGMLENARLLFERIQ-PKDCVS 271
+ TA++ + K ++ A LF + V+
Sbjct: 316 CSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVT 375
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ AMI G+ QN E+A+ LF M + ++P+ T +V + L Q H +I
Sbjct: 376 WTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL----SQLHAQII 431
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ +E SV A++ Y + G +++S F I + ++V+W+ ++ AQ EKA+
Sbjct: 432 KAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAME 491
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F Q+ G P+ TF S+++AC + E G + + L+ +
Sbjct: 492 VFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMY 551
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
S+ G +E A ++ E D W S++
Sbjct: 552 SKKGNIESAEKVFTRQE-ERDIVSWNSMITG 581
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 165/359 (45%), Gaps = 26/359 (7%)
Query: 152 GFLKH---------GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
GFL H R A +LF++ P +++ Y +L F + +A L F
Sbjct: 38 GFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHL-----F 92
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM-----------PDYDKNVFVVTAMITGFCKV 251
K++ S + + G + LF ++ + ++V V T+++ + K
Sbjct: 93 KDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKT 152
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
E+ R +F+ + K+ VS+ ++++GYA+NG+ +E + L + M + P+ T +V
Sbjct: 153 EDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVL 212
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
A + ++ G Q H ++++NGFE VCNA+I MY + + D+E F + + V
Sbjct: 213 GALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSV 272
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+WN +I +A G Y + F +M L G F + L C ++N + L +
Sbjct: 273 TWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGV 332
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
VK G + + T L+ S+ +++A+++ + W +++ V N N E
Sbjct: 333 VK-NGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNE 390
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 108/233 (46%), Gaps = 16/233 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+ + + V A + A + G + + ++F + KD++ W+A++TG Q +++
Sbjct: 430 IIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKA 489
Query: 101 KNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMIS 151
+F + + N +++ +I C + + A ++ + +A+++
Sbjct: 490 MEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLT 549
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VS 207
+ K G +E A ++F + R+++S+ +M+ G+ + G+ KA + M + + V+
Sbjct: 550 MYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVT 609
Query: 208 WTVMITGYVKNERFCEARELFYRM-PDY--DKNVFVVTAMITGFCKVGMLENA 257
+ ++T E + F M DY DK + + M+ + + GM + A
Sbjct: 610 FIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKA 662
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 304/587 (51%), Gaps = 69/587 (11%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
+S + G + R++FD M K+V WN +++ Y + G +ES LF+ M K I
Sbjct: 141 VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI---- 196
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------- 169
+ R + AF+ F + +R+ ++N+MISG++ +G E +++QM
Sbjct: 197 -------EGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDV 249
Query: 170 ---------------------------------PRRNVISYTAMLDGFMKKGEVDKARAL 196
RR S T +LD + K G++D A +
Sbjct: 250 DLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNT-LLDMYSKCGDLDGALRV 308
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGML 254
+ M +NVVSWT MI GY ++ R A +L +M +V +T+++ + G L
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSL 368
Query: 255 ENARLLFERIQPKDCVS----FNAMIAGYAQNGVAEEALRLFSGMIKMD----------M 300
+N + + + I+ + S NA++ YA+ G E A +FS M+ D +
Sbjct: 369 DNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL 428
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+PD T+ V AC++L L G++ H ++RNG+ ++ V NA++ +Y +CG + + L
Sbjct: 429 KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F I S +LVSW +IA + HG+ +A+ F++M G +PD ++F+S+L AC H+G
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + F +M + I P EHY C+VD+LSR G L KA++ + +P D +WG+LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
C ++EL E A+++ EL+P+NS YV+L+N+YA A W +V R+R + +QG+ K
Sbjct: 609 CGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRK 668
Query: 541 QCAYSWIEIGNKVHYFLGG-DMSHPCIDKIHLELKRASVQMKSVDDF 586
SWIEI KV+ F+ G + SHP I LK+ +MK F
Sbjct: 669 NPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHF 715
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 161/348 (46%), Gaps = 61/348 (17%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
++S + G L+E R+F+ M ++NV + M+ + K G+ ++ L +
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICL-----------F 188
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+M+ ++ +R A ELF ++ D D
Sbjct: 189 KIMVEKGIEGKRPESAFELFDKLCDRD--------------------------------- 215
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
+S+N+MI+GY NG+ E L ++ M+ + + D AT++SV C+ L+ G+ H
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
L I++ FE ++ N ++ MYS+CG + + F ++ N+VSW ++IA + + G +
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDG 335
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC-- 446
A+ QM G D + S+L AC +G ++ D+ + +K + S + C
Sbjct: 336 AIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKANNM--ESNLFVCNA 392
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
L+D+ ++ G +E A V+ +++ +I+ N +GEL
Sbjct: 393 LMDMYAKCGSMEAA------------NSVFSTMVVKDIISWNTMIGEL 428
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 186/424 (43%), Gaps = 64/424 (15%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N + S+ G + A ++F++M ++V++W ++I GY ++G + L Q M + +
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGV 348
Query: 113 ---------VSWNCMIAGCIDNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEA 162
+ C +G +DN + D DY +A E N NA++ + K G +E A
Sbjct: 349 KLDVVAITSILHACARSGSLDNGK--DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAA 406
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+F M +++IS+ M+ G +K A L S + + I GY+
Sbjct: 407 NSVFSTMVVKDIISWNTMI-GELKPDSRTMACVLPACASL-SALERGKEIHGYILRN--- 461
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
Y + V A++ + K G+L ARLLF+ I KD VS+ MIAGY +
Sbjct: 462 ----------GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMH 511
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G EA+ F+ M ++PD+ + +S+ ACS LL +G + +++N F
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR-FFYIMKNDFNI----- 565
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
P L + ++ ++ G+ KA F + +
Sbjct: 566 ------------------------EPKLEHYACMVDLLSRTGNLSKAYEFIETLPIA--- 598
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP-SSEHYTCLVDILSRAGQLEKAW 461
PD + +LL C + + + + E +V+ + P +S +Y L +I + A + E+
Sbjct: 599 PDATIWGALLCGCRNYHDIELAEKVAE---RVFELEPENSGYYVLLANIYAEAEKWEEVK 655
Query: 462 QITQ 465
++ +
Sbjct: 656 RLRE 659
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 55/262 (20%)
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+NA I + Q G E A+ L K +++ T SV C+ L+ +G++ H ++
Sbjct: 69 YNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKSFTDGKKVHSIIK 126
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN---------------------- 369
N + ++ +++ Y+ CG + + F + N
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 370 -----------------------------LVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
++SWN++I+ + +G E+ L + QM G
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
D D T +S+L C ++G ++ + L +K L+D+ S+ G L+ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS-SFERRINFSNTLLDMYSKCGDLDGA 305
Query: 461 WQITQGMPFEADTGVWGSLLAA 482
++ + M E + W S++A
Sbjct: 306 LRVFEKMG-ERNVVSWTSMIAG 326
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 13/189 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V NA + + G + AR LFD + +KD+++W +I GY +G+ E+ F M
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEA 162
I VS+ ++ C + ++ + +F M E Y M+ + G L +A
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588
Query: 163 TRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDY---MSFKNVVSWTVMITGYVKN 218
E +P + + A+L G +++ A +++ + +N + ++ Y +
Sbjct: 589 YEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEA 648
Query: 219 ERFCEAREL 227
E++ E + L
Sbjct: 649 EKWEEVKRL 657
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 284/543 (52%), Gaps = 46/543 (8%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF-QAMPER-- 141
N++I Y+++G + + LF + +++VSWN MI+GC+ N A ++F Q + R
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651
Query: 142 -NTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFMKKGEVDKARAL 196
+ AT ++ G L L Q + R V+ +LD + K G ++ A
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----------------Y 234
+ M K VVSWT +I YV+ + +A LFY M PD
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771
Query: 235 DKN---------------VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
DK + V A++ + K G +E A L+F +I KD VS+N MI GY
Sbjct: 772 DKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGY 831
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
++N + EAL+LF+ M K + +PD T+ + AC +L L GR H ++RNG+ + +
Sbjct: 832 SKNSLPNEALKLFAEMQK-ESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSEL 890
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
V NA+I MY +CG ++ + L F I +L++W +I+ HG +A+ F +M +
Sbjct: 891 HVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIA 950
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
G PD ITF S+L AC H+G +NE F M+ + P EHY C+VD+L+R G L K
Sbjct: 951 GIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSK 1010
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
A+ + + MP + D +WG+LL C I+ +VEL E A+ + EL+P N+ YV+L+N+YA
Sbjct: 1011 AYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAE 1070
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQ 579
A W +V ++R + ++G+ K SWIE+ K F+ D +HP I L ++
Sbjct: 1071 AEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIK 1130
Query: 580 MKS 582
MK+
Sbjct: 1131 MKN 1133
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 5/215 (2%)
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N I + + G A+ L K ++ D S+ C+ + L EG+ H ++
Sbjct: 422 NTKICKFCEVGDLRNAVELLRMSQKSEL--DLNAYSSILQLCAEHKCLQEGKMVHSVISS 479
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV-SWNTIIAAFAQHGHYEKALI 391
NG + ++ MY CG + + F I S N V WN +++ +A+ G Y +++
Sbjct: 480 NGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIY 539
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F +M G + TF +L G+V E + + K+ G + L+
Sbjct: 540 LFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKL-GFGSYNTVVNSLIATY 598
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
++G+++ A ++ + + D W S+++ CV+N
Sbjct: 599 FKSGEVDSAHKLFDELG-DRDVVSWNSMISGCVMN 632
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 284/507 (56%), Gaps = 25/507 (4%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI 150
Y++ G +QE+ F +MP++NI+S N +I G + + +D A F M ERN AT+NAM+
Sbjct: 2 YFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMV 61
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
SG ++ E LF +M + D F + L + K V ++ V
Sbjct: 62 SGLIQFEFNENGLFLFREMHELGFLP-----DEFTLGSVLRGCAGLRASYAGKQVHAY-V 115
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ GY N + V +++ + K G L + + ++ ++ V
Sbjct: 116 LKYGYEFN-------------------LVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVV 156
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++N +IAG AQNG E L L++ M ++PD TLVSV ++ + L L +G+Q H
Sbjct: 157 AWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEA 216
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
I+ G + V+V +++I+MYS+CG + DS A P+ V W+++IAA+ HG E+A+
Sbjct: 217 IKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAV 276
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F QM G + +TFLSLL AC H G + M F+LMV+ YG+ P EHYTC+VD+
Sbjct: 277 HLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDL 336
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L R+G L++A + + MP EAD +W +LL+AC I+ N ++ A+++ L+PQ+SA Y
Sbjct: 337 LGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATY 396
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V+LSN++A+A W+DV++VR M+++ V K+ SW+E+ N+V F GD SHP ++I
Sbjct: 397 VLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEID 456
Query: 571 LELKRASVQMKSVDDFVEIATSWSSFD 597
L LK +MK + AT + D
Sbjct: 457 LYLKELMEEMKLRGYVPDTATVFHDTD 483
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 161/375 (42%), Gaps = 59/375 (15%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
+ G+I A F+ M +++++ N +I G+ Q+G L + +F M +N+ +WN M++G
Sbjct: 4 KMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSG 63
Query: 122 CIDNDRIDDAFDYFQAMPE--------------RNTATYNAMISGFLKHGRLEEATRLFE 167
I + ++ F+ M E R A A +G H + + F
Sbjct: 64 LIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEF- 122
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
N++ +++ +MK G + + + M +NVV+W +I G +N F +L
Sbjct: 123 -----NLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDL 177
Query: 228 FYRM------PDY-------------------------------DKNVFVVTAMITGFCK 250
+ M PD + V V++++I+ + K
Sbjct: 178 YNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSK 237
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G LE++ + D V +++MIA Y +G EEA+ LF M + + +D T +S+
Sbjct: 238 CGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSL 297
Query: 311 FTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SP 368
ACS L +G L++ G + + V+ + R G + ++E R +
Sbjct: 298 LYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEA 357
Query: 369 NLVSWNTIIAAFAQH 383
++V W T+++A H
Sbjct: 358 DVVIWKTLLSACRIH 372
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+ + V V ++ IS S+ G + + + D + W+++I Y +G +E+
Sbjct: 217 IKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAV 276
Query: 102 NLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISG 152
+LF+ M + N V++ ++ C N + +F+ M E+ Y ++
Sbjct: 277 HLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDL 336
Query: 153 FLKHGRLEEATRLFEQMP 170
+ G L+EA + MP
Sbjct: 337 LGRSGCLDEAEAMIRSMP 354
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 304/592 (51%), Gaps = 63/592 (10%)
Query: 16 LFPPILRILSTPDSCG-NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
+F +L++L + D +T H+ C+ +L FV A I A S G + AR +FD
Sbjct: 138 VFTTLLKLLVSMDLAHLCWTLHA--CVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFD 195
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDY 134
+ KD+++W ++ Y +N F +ES LF M + N I+G + + +AF+
Sbjct: 196 DICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNV 255
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
+ + + G H ++ A+L+ + K GE+ A+
Sbjct: 256 -------GKSVHGCALKGCYDH----------------DLFVGIALLELYAKSGEIIDAQ 292
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD--------------- 233
L + M +++ W++MI Y +++R EA +LF RM P+
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352
Query: 234 ----------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ NVFV A++ + K G +EN+ LFE + ++ V++N +I
Sbjct: 353 SLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIV 412
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GY Q G E A+ LF+ M++ DMQP + T SV A ++L L G Q H L I+ +
Sbjct: 413 GYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNK 472
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ V N++I MY++CG I D+ L F +++ + VSWN +I ++ HG +AL F M
Sbjct: 473 DTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQ 532
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
P+ +TF+ +LSAC +AG + + FE M K Y I P EHYTC+V +L R G+
Sbjct: 533 HTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRF 592
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
++A ++ + ++ VW +LL ACVI+ V+LG + A+ + E++P + A +V+LSN+Y
Sbjct: 593 DEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMY 652
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
A AG W +V VR M+++ V K+ SW+E VHYF GD SHP I I
Sbjct: 653 ATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLI 704
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 221/476 (46%), Gaps = 57/476 (11%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKI--SALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQ 93
H CL L S Y + I A AGK + + T+ D+ N ++ Y Q
Sbjct: 24 HHQQCLSALDSHSYAHMLQQIIRNGADPIAGK-HLHCHILKRGTSLDLFAQNILLNFYVQ 82
Query: 94 NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERN----TAT 145
+ LQ++ LF MP N +S+ + G + + A + F+ E N T
Sbjct: 83 SNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTL 142
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV 205
++S L H +++ + TA++D + +G VD AR + D + K++
Sbjct: 143 LKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDM 202
Query: 206 VSWTVMITGYVKNERFCEARELFYRM------PD-------------------------- 233
VSWT M+ Y +N + E+ +LF +M P+
Sbjct: 203 VSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGC 262
Query: 234 -----YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
YD ++FV A++ + K G + +A+ LFE + D + ++ MIA YAQ+ ++EA
Sbjct: 263 ALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEA 322
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
L LF M + + P++ T SV AC++ L+ G+Q H V++ G +NV V NA++ +
Sbjct: 323 LDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDV 382
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y++CG I +S F ++ N V+WNTII + Q G E+A+ F+ M + P +T+
Sbjct: 383 YAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTY 442
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVY----GIIPSSEHYTCLVDILSRAGQLEKA 460
S+L A + + + L +K ++ +S L+D+ ++ G++ A
Sbjct: 443 SSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANS-----LIDMYAKCGRINDA 493
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 178/345 (51%), Gaps = 10/345 (2%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMS 201
N +++ +++ L++A++LF++MP+ N IS+ + G+ + + +A R +
Sbjct: 74 NILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHE 133
Query: 202 FKNVVSWTVMITGYVKNE--RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
V +T ++ V + C + + FV TA+I + G ++ AR
Sbjct: 134 VNPFV-FTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARH 192
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F+ I KD VS+ M+A YA+N EE+L+LF+ M M +P++ T+ +C L+
Sbjct: 193 VFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEA 252
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
N G+ H ++ ++ ++ V A++ +Y++ G I+D++ F ++ +L+ W+ +IA
Sbjct: 253 FNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIAR 312
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+AQ ++AL F +M P+ TF S+L AC + ++ + ++K +G+
Sbjct: 313 YAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLK-FGLNS 371
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+ ++D+ ++ G++E + ++ + +P D W +++ V
Sbjct: 372 NVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDV-TWNTIIVGYV 415
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 293/542 (54%), Gaps = 23/542 (4%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q V V N I+ +AG +S AR +F QM D+I+WN +I+G +G + S +F +
Sbjct: 968 QVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHL 1027
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYF---------QAMPERNTATYNAMISGFLKHGR 158
+++ +A + + Y +A ++ A+I + K G+
Sbjct: 1028 LRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGK 1087
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDYMSFKNVVSW 208
+EEA LF ++ S+ A++ G++ G+ KA L SD ++ N
Sbjct: 1088 MEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKA 1147
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+ G + ++ ++ ++FV + ++ + K G +E+AR +F I D
Sbjct: 1148 AGGLVGLKQGKQI----HAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPD 1203
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
V++ MI+G +NG E AL + M +QPD+ T ++ ACS L L +GRQ H
Sbjct: 1204 DVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHA 1263
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
+++ + V +++ MY++CG I D+ F++ ++ + SWN +I AQHG+ ++
Sbjct: 1264 NIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKE 1323
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL FF M G PD +TF+ +LSAC H+G V+E+ + F M K YGI P EHY+CLV
Sbjct: 1324 ALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLV 1383
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
D LSRAG++E+A ++ MPFEA ++ +LL AC + ++ E G+ A+K+ L+P +SA
Sbjct: 1384 DALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSA 1443
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDK 568
YV+LSN+YAAA W +V R +M++ V K +SW+++ NKVH F+ GD SH D
Sbjct: 1444 AYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDV 1503
Query: 569 IH 570
I+
Sbjct: 1504 IY 1505
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 207/462 (44%), Gaps = 26/462 (5%)
Query: 21 LRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKD 80
LR+ + + TP + LI + + A ++ GK + AR L
Sbjct: 634 LRLRAATSTANPLTPRAH--LIHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDR 691
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKN--IVSWNCMIAGCIDN-DRIDDAFDYFQA 137
+T N +IT Y + G L ++ LF + P N +V+WN +++ + D+ D F F+
Sbjct: 692 FVT-NNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRL 750
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMP--------RRNVISYTAMLDGFMKKGE 189
+ +T ++ K L + E + + +V A+++ + K G
Sbjct: 751 LRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGL 810
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF---YRMPDYDKNVFVVTAMIT 246
+ +AR L D M+ ++VV W VM+ YV EA LF +R +V + T
Sbjct: 811 IREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRV 870
Query: 247 GFCKVGMLE-------NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
CK +LE +L D + +N ++ + Q G A EA+ F MI
Sbjct: 871 VKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSR 930
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+ D T V + T + L L G+Q H +V+R+G + VSV N +I MY + G + +
Sbjct: 931 VACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRAR 990
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH-A 418
F Q++ +L+SWNT+I+ G E ++ F + + PD T S+L AC
Sbjct: 991 SVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLE 1050
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
G + + +K G++ S T L+D+ S+ G++E+A
Sbjct: 1051 GGYYLATQIHACAMKA-GVVLDSFVSTALIDVYSKRGKMEEA 1091
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 204/448 (45%), Gaps = 37/448 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA---FDYFQ 136
DV A++ Y + G ++E++ LF M V+++V WN M+ +D +A F F
Sbjct: 794 DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853
Query: 137 AMPERNTATYNAMISGFLKHGR----LEE----ATRLF-EQMPRRNVISYTAMLDGFMKK 187
R +S +K + L++ AT+LF +VI + L F+++
Sbjct: 854 RTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQR 913
Query: 188 GE--------VD--KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
GE VD +R D ++F VV TV + G E + + R D+
Sbjct: 914 GEAWEAVDCFVDMINSRVACDGLTF--VVMLTV-VAGLNCLELGKQIHGIVMR-SGLDQV 969
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
V V +I + K G + AR +F ++ D +S+N MI+G +G+ E ++ +F +++
Sbjct: 970 VSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLR 1029
Query: 298 MDMQPDDATLVSVFTACSALQLLNEG-----RQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ PD T+ SV ACS+L EG Q H ++ G + V A+I +YS+
Sbjct: 1030 DSLLPDQFTVASVLRACSSL----EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKR 1085
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + ++E F +L SWN I+ + G + KAL + M +G D IT ++
Sbjct: 1086 GKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAA 1145
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
A G + + + ++VK G + ++D+ + G++E A ++ +P D
Sbjct: 1146 KAAGGLVGLKQGKQIHAVVVK-RGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDD 1204
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMR 500
W ++++ CV N E +MR
Sbjct: 1205 VA-WTTMISGCVENGQEEHALFTYHQMR 1231
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 16/188 (8%)
Query: 33 FTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTK----DVITWNAII 88
FT H L ++ +Y F K +L A + RQ+ + D +++
Sbjct: 1225 FTYHQMR-LSKVQPDEYTFATLVKACSLLTA--LEQGRQIHANIVKLNCAFDPFVMTSLV 1281
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTA 144
Y + G +++++ LF+ + I SWN MI G + +A +F+ M R +
Sbjct: 1282 DMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRV 1341
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVIS-----YTAMLDGFMKKGEVDKARALSDY 199
T+ ++S G + EA F M + I Y+ ++D + G +++A +
Sbjct: 1342 TFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISS 1401
Query: 200 MSFKNVVS 207
M F+ S
Sbjct: 1402 MPFEASAS 1409
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 195/624 (31%), Positives = 318/624 (50%), Gaps = 83/624 (13%)
Query: 43 RLFST---QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
RLF + F N +SA ++AG + +AR++FD++ D ++W +I GY G +
Sbjct: 69 RLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKS 128
Query: 100 SKNLFQSMPVKNI---------VSWNCMIAGCIDNDRIDDAFDY---------------- 134
+ + F M I V +C A +D + +F
Sbjct: 129 AVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLN 188
Query: 135 --------------FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
F M ++T+T+N MIS ++ + + A LF+QM +++S+ ++
Sbjct: 189 MYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSI 248
Query: 181 LDGFMKKGEVDKARALSDYM------------------------SFK-------NVVSWT 209
+ G+ +G +A +M S K ++V
Sbjct: 249 ITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRAD 308
Query: 210 VMITGYVKNERFC-----EARELFYRMPDYDK----NVFVVTAMITGFCKVGMLENARLL 260
V I G V N A E+ +R+ + NV T+++ G+ K+G ++ AR +
Sbjct: 309 VDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAI 368
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ ++ +D V++ AMI GYAQNG+ +AL LF MI+ +P++ TL +V + S+L L
Sbjct: 369 FDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASL 428
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAA 379
+ G+Q H + IR ++VSV NA+ITMYSR G I D+ F I S + ++W ++I +
Sbjct: 429 DHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILS 488
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
AQHG +A+ F +M PD IT++ +LSAC H G V + F LM V+ I P
Sbjct: 489 LAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEP 548
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+S HY C++D+L RAG LE+A+ + MP E D WGSLL++C ++ V+L ++AA+K+
Sbjct: 549 TSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKL 608
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
+DP NS Y+ L+N +A G W D +VR MK++ V K+ +SW++I NKVH F
Sbjct: 609 LLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVE 668
Query: 560 DMSHPCIDKIHLELKRASVQMKSV 583
D HP D I+ + + ++K +
Sbjct: 669 DALHPQRDAIYCMISKIWKEIKKM 692
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 223/475 (46%), Gaps = 93/475 (19%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L + V V N+ ++ ++ G A+ +FD+M KD TWN +I+ + Q +
Sbjct: 171 VVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLA 230
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNT---------- 143
LF M +IVSWN +I G A + F M P++ T
Sbjct: 231 LALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACAN 290
Query: 144 -----------------------ATYNAMISGFLKHGRLEEATRLFE--QMPRRNVISYT 178
A NA+IS + K G +E A R+ E P NVI++T
Sbjct: 291 RESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFT 350
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----P-- 232
++LDG+ K G++D ARA+ D + ++VV+WT MI GY +N +A LF M P
Sbjct: 351 SLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKP 410
Query: 233 ------------------DYDKNVFVVT-------------AMITGFCKVGMLENARLLF 261
D+ K + V A+IT + + G +++AR +F
Sbjct: 411 NNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIF 470
Query: 262 ERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
I +D +++ +MI AQ+G+ EA+ LF M++++++PD T V V +AC+ + L+
Sbjct: 471 NHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLV 530
Query: 321 NEGRQSHVLVIRN--GFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTII 377
+G+ S+ +++N E S +I + R G + ++ R + P++V+W +++
Sbjct: 531 EQGK-SYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLL 589
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDG----ITFLSLLSACGH---AGKVNESM 425
++ H + + A + ++ L DP+ + + LSACG A KV +SM
Sbjct: 590 SSCRVHKYVDLAKVAAEKLLL--IDPNNSGAYLALANTLSACGKWEDAAKVRKSM 642
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 211/488 (43%), Gaps = 49/488 (10%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G+ AR + + V N ++ Y + G ++ LF MP+K SWN +++
Sbjct: 31 GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTA 179
+D A F +P+ ++ ++ MI G+ G + A F +M + ++T
Sbjct: 91 KAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTN 150
Query: 180 MLDGFMKKGEVDKARALSDY---MSFKNVVS-WTVMITGYVKNERFCEARELFYRMPDYD 235
+L +D + + + + VV ++ Y K A+ +F RM D
Sbjct: 151 VLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKD 210
Query: 236 KNVF-VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ + + +M FC+ + A LF+++ D VS+N++I GY G AL FS
Sbjct: 211 TSTWNTMISMHMQFCQFDL---ALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSF 267
Query: 295 MIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+K ++PD TL SV +AC+ + L G+Q H ++R + +V NA+I+MY++ G
Sbjct: 268 MLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSG 327
Query: 354 GI--------------------------------LDSELA-FRQIHSPNLVSWNTIIAAF 380
+ +D A F + ++V+W +I +
Sbjct: 328 AVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGY 387
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
AQ+G AL+ F M G P+ T ++LS ++ L + +++ + S
Sbjct: 388 AQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEE-VSS 446
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGELAAKKM 499
L+ + SR+G ++ A +I + DT W S++ + + L E EL K +
Sbjct: 447 VSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKML 506
Query: 500 R-ELDPQN 506
R L P +
Sbjct: 507 RINLKPDH 514
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 180/541 (33%), Positives = 287/541 (53%), Gaps = 41/541 (7%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV N +I Y G L +++ +F V ++VSWN M+AG + +++A D + MP
Sbjct: 160 DVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMP 219
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
ERN N+MI F K G +EEA +LF +M +++++S++A++ + + ++A L
Sbjct: 220 ERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKE 279
Query: 200 MSFKNVV--------------SWTVMITG-------------------------YVKNER 220
M+ ++ V+ITG Y E
Sbjct: 280 MNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEE 339
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
A++LF D+ + +MI+G+ K G +E AR LF+ + KD VS++AMI+GYA
Sbjct: 340 VVTAQKLFSESCCLDQISW--NSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYA 397
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
Q E L LF M +PD+ LVSV +AC+ L L++G+ H + +NG + N+
Sbjct: 398 QQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINII 457
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
+ +I MY + G + D+ F+ + + +WN +I A +G +K+L FS+M +G
Sbjct: 458 LGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHG 517
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
P+ ITF+++L AC H G V+E F M++ + I P+ +HY C+VD+L RAG L++A
Sbjct: 518 VTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEA 577
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
++ + MP D WG+LL AC + E GE +K+ EL P + V+LSN+YA+
Sbjct: 578 EELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASK 637
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
G W DV VR +M++ GV K S IE +VH FL GD +HP + I L + ++
Sbjct: 638 GNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKL 697
Query: 581 K 581
K
Sbjct: 698 K 698
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 192/453 (42%), Gaps = 81/453 (17%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS--WTVMITGYV 216
+ ++ ++F + N M+ G+M++ KA + +M NV + +T I
Sbjct: 76 INQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS 135
Query: 217 KNERFCE-----ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ R E ++ ++ +D +V++ +I + G L +AR +F+ D VS
Sbjct: 136 CSIRLAEFDGKCIQDHVLKV-GFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVS 194
Query: 272 FNAMIAGY-------------------------------AQNGVAEEALRLFSGMIKMDM 300
+N+M+AGY + G EEA +LF+ M + D+
Sbjct: 195 WNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDL 254
Query: 301 -------------------------------QPDDATLVSVFTACSALQLLNEGRQSHVL 329
D+ ++SV +ACS L ++ G+ H L
Sbjct: 255 VSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGL 314
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
V++ G E V++ NA+I MYS C ++ ++ F + + +SWN++I+ + + G EKA
Sbjct: 315 VVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKA 374
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
F M D D +++ +++S + E++ LF+ M ++ G P T LV
Sbjct: 375 RALFDSMP----DKDNVSWSAMISGYAQQDRFTETLVLFQEM-QIEGTKPDE---TILVS 426
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGV-WGSLLAACVINLNVELG--ELAAKKMRELDPQN 506
++S L Q + G+ +L +IN+ ++LG E A + + L+ +
Sbjct: 427 VISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKG 486
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
+ + L A G+ + MKE GVT
Sbjct: 487 VSTWNALILGLAMNGLVDKSLKTFSEMKEHGVT 519
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 136/290 (46%), Gaps = 20/290 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++++ YV + NA I S ++ A++LF + D I+WN++I+GY + G ++++
Sbjct: 315 VVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKA 374
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN----AMISGFLKH 156
+ LF SMP K+ VSW+ MI+G DR + FQ M T ++IS
Sbjct: 375 RALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHL 434
Query: 157 GRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
L++ + + + N+I T +++ +MK G V+ A + + K V +W +I
Sbjct: 435 AALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALI 494
Query: 213 TGYVKNERFCEARELFYRMPDYDKNVFVVT-AMITGFCK-VGMLENARLLF------ERI 264
G N ++ + F M ++ +T + G C+ +G+++ F +I
Sbjct: 495 LGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKI 554
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
P + + M+ + G+ +EA L M M PD +T ++ AC
Sbjct: 555 GP-NIKHYGCMVDLLGRAGMLKEAEELIES---MPMAPDVSTWGALLGAC 600
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 302/545 (55%), Gaps = 18/545 (3%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV---- 109
N I + + G++ AA +LFD M K++I+W +++GY QN +E+ LF SMP
Sbjct: 288 NVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLK 347
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEATRL 165
++ + + ++ C ++ +A ++ N++I + K L EA ++
Sbjct: 348 PDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKV 407
Query: 166 FEQMPRRNVISYTAMLDGFMKKG---EVDKARALSDYMSFK----NVVSWTVMITGYVKN 218
F+ +V+ + AM++G+ + G E+ A + M F+ +++++ ++
Sbjct: 408 FDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASL 467
Query: 219 ERFCEARELFYRMPDYDKN--VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
++++ M + N +F +A+I + L+++RL+F+ ++ KD V +N+M
Sbjct: 468 TSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+GY Q EEAL LF + +PD+ T V + TA L L G++ H +++ G E
Sbjct: 528 SGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLE 587
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
N + NA++ MY++CG D+ AF S ++V WN++I+++A HG KAL +M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKM 647
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G +P+ ITF+ +LSAC HAG V + + FELM++ +GI P +EHY C+V +L RAG+
Sbjct: 648 MCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGR 706
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
L +A ++ + MP + VW SLL+ C NVEL E AA+ DP++S + +LSN+
Sbjct: 707 LNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNI 766
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
YA+ GMW D +VR MK +GV K+ SWIEI +VH FL D SH ++I+ L
Sbjct: 767 YASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Query: 577 SVQMK 581
VQ++
Sbjct: 827 LVQIR 831
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 207/456 (45%), Gaps = 53/456 (11%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D N ++ Y + G + ++ +F+ MP +N+V+W+ M++ C + +++ F
Sbjct: 78 DTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFW 137
Query: 140 ERNTATYNAMI--------SGFLKHGR---LEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ N I SG GR + + L + R+V T ++D ++K+G
Sbjct: 138 RTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEG 197
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD--------- 233
+D AR + D + K+ V+WT MI+G VK R + +LFY++ PD
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLS 257
Query: 234 ----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
++K+ ++ +I + K G + A LF+ + K+ +S
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIIS 317
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ +++GY QN + +EA+ LF+ M K ++PD S+ T+C++L L G Q H I
Sbjct: 318 WTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTI 377
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG---HYEK 388
+ + V N++I MY++C + ++ F + ++V +N +I +++ G
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHD 437
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL F M P +TF+SLL A + S + LM K +G+ + L+
Sbjct: 438 ALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-FGLNLDIFAGSALI 496
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+ S L+ + + M + D +W S+ + V
Sbjct: 497 AVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFSGYV 531
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 205/451 (45%), Gaps = 21/451 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V I + G I AR +FD + K +TW +I+G + G S LF +
Sbjct: 183 VYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 110 KNIVSWN---------CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
N+V C I ++ + A + E++ + N +I ++K GR+
Sbjct: 243 GNVVPDGYILSTVLSACSILPFLEGGKQIHA-HILRYGHEKDASLMNVLIDSYVKCGRVR 301
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
A +LF+ MP +N+IS+T +L G+ + +A L M + + + +
Sbjct: 302 AAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCA 361
Query: 221 FCEARELFYRMPDYD------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
A E ++ Y + +V ++I + K L AR +F+ D V FNA
Sbjct: 362 SLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNA 421
Query: 275 MIAGYAQNGVAEE---ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
MI GY++ G E AL +F M ++P T VS+ A ++L L +Q H L+
Sbjct: 422 MIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ G ++ +A+I +YS C + DS L F ++ +LV WN++ + + Q E+AL
Sbjct: 482 KFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALN 541
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F ++ L+ PD TF+ +++A G+ + + ++K G+ + L+D+
Sbjct: 542 LFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLK-RGLECNPYITNALLDMY 600
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ G E A + D W S++++
Sbjct: 601 AKCGSPEDAHKAFDSAA-SRDVVCWNSVISS 630
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 155/286 (54%), Gaps = 9/286 (3%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA--LS 197
E +T N +++ + + G + A ++FE+MP RN+++++ M+ G +++ L
Sbjct: 76 ELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLD 135
Query: 198 DYMSFKN------VVSWTVMITGYVKNERFCEAR-ELFYRMPDYDKNVFVVTAMITGFCK 250
+ + KN + S+ +G + R+ + + F +D++V+V T +I + K
Sbjct: 136 FWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLK 195
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G ++ ARL+F+ + K V++ MI+G + G + +L+LF +++ ++ PD L +V
Sbjct: 196 EGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTV 255
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
+ACS L L G+Q H ++R G E + S+ N +I Y +CG + + F + + N+
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNI 315
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+SW T+++ + Q+ +++A+ F+ M G PD S+L++C
Sbjct: 316 ISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCA 361
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 28/294 (9%)
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
RAL D + + NVV ++++G + + ++ ++ + + G
Sbjct: 54 RALDDPLLYHNVVHGQIIVSG-------------------LELDTYLSNILMNLYSRAGG 94
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ-PDDATLVSVFT 312
+ AR +FE++ ++ V+++ M++ +G EE+L +F + P++ L S
Sbjct: 95 MVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQ 154
Query: 313 ACSALQLLNEGR----QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
ACS L GR Q ++++ F+ +V V +I Y + G I + L F +
Sbjct: 155 ACSGLD--GSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEK 212
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
+ V+W T+I+ + G +L F Q+ PDG ++LSAC + +
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+++ YG + L+D + G++ A ++ GMP + W +LL+
Sbjct: 273 AHILR-YGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMP-NKNIISWTTLLSG 324
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 56/303 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F +A I+ S + +R +FD+M KD++ WN++ +GY Q +E+ NLF + +
Sbjct: 489 IFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQL 548
Query: 110 K----NIVSWNCMI--AGCIDNDRIDDAF--DYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ ++ M+ AG + + ++ F + E N NA++ + K G E+
Sbjct: 549 SRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDYMSFKNVVS---- 207
A + F+ R+V+ + +++ + GE KA + +Y++F V+S
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSH 668
Query: 208 -------------------------WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
+ M++ + R EAREL +MP + V
Sbjct: 669 AGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAI-VWR 727
Query: 243 AMITGFCKVGMLENARLLFERI---QPKDCVSFNAMIAGYAQNGVAEEALRL-----FSG 294
++++G K G +E A E PKD SF + YA G+ +A ++ F G
Sbjct: 728 SLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEG 787
Query: 295 MIK 297
++K
Sbjct: 788 VVK 790
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H +I +G E + + N ++ +YSR GG++ + F ++ NLV+W+T+++A HG Y
Sbjct: 67 HGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFY 126
Query: 387 EKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY- 444
E++L+ F P+ S + AC M +F+L + + Y
Sbjct: 127 EESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWM-VFQLQSFLVKSRFDRDVYV 185
Query: 445 -TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
T L+D + G ++ A + +P E T W ++++ CV
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALP-EKSTVTWTTMISGCV 225
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 296/564 (52%), Gaps = 51/564 (9%)
Query: 57 ISALSRAGKISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
++A + G + +QL + D IT +++ Y + G ++ + ++F N+
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNV 311
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V WN M+ + +F+ F M N TY ++ G++E ++
Sbjct: 312 VLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSL 371
Query: 169 MPRRNVIS--YTA--MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE- 223
+ S Y + ++D + K +DKAR + + + ++VVSWT MI GYV+++ FCE
Sbjct: 372 SIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHD-FCEE 430
Query: 224 ARELFYRMPD-------------------------------------YDKNVFVVTAMIT 246
A F M D Y ++ + ++
Sbjct: 431 ALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVN 490
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ + G E A LF I KD +++N +I+G+ Q+ + E+AL +F M + + + T
Sbjct: 491 LYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFT 550
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+S +A + L + +G+Q H ++ G + V NA+I++Y +CG I D+++ F ++
Sbjct: 551 FISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMS 610
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
N VSWNTII + +QHG +AL F QM G P+ +TF+ +L+AC H G V E +
Sbjct: 611 LRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLS 670
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
F+ M VYG+ P +HY C+VDIL RAGQL++A + MP A+ +W +LL+AC ++
Sbjct: 671 YFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
N+E+GELAAK + EL+P +SA YV+LSN YA G W + +VR +MK++G+ K+ SW
Sbjct: 731 KNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSW 790
Query: 547 IEIGNKVHYFLGGDMSHPCIDKIH 570
IE+ N VH F GD HP D+I+
Sbjct: 791 IEVKNAVHAFFVGDRLHPLSDQIY 814
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 213/454 (46%), Gaps = 28/454 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
FV NA I+ G A ++F M D +T+N +I+G+ Q G + + +F M +
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 110 KNI----VSWNCMIAGCI---DNDRIDDAFDY-FQAMPERNTATYNAMISGFLKHGRLEE 161
+ V+ ++A C D + Y +A + T +++ ++K G +E
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV---------VSWTVMI 212
A +F R NV+ + ML + + ++ K+ + M + + T
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTC 358
Query: 213 TGYVKNERFCEARELFYRMP---DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
TG + E E + + ++ +++V +I + K L+ AR + E ++ +D
Sbjct: 359 TGQI------ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDV 412
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+ +MIAGY Q+ EEAL F M + PD+ L S +AC+ ++ + +G Q H
Sbjct: 413 VSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHAR 472
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
V +G+ A++S+ N ++ +Y+RCG ++ FR+I + ++WN +I+ F Q YE+A
Sbjct: 473 VYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQA 532
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L+ F +M G + TF+S +SA + + + + VK G +E L+
Sbjct: 533 LMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALIS 591
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ + G +E A I M + W +++ +C
Sbjct: 592 LYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSC 624
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 199/447 (44%), Gaps = 18/447 (4%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
+ N I ++ G + ARQ+F +++++D ++W A+++GY Q G +E+ L+ M
Sbjct: 79 LIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWT 138
Query: 108 ---PVKNIVSW---NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
P ++S C R+ A Y QA T NA+I+ +L G +
Sbjct: 139 AVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCS-ETFVGNALIALYLGFGSFKL 197
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A R+F M + +++ ++ G + G + A + D M + V+ ++
Sbjct: 198 AERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACAS 257
Query: 218 NERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ ++L + + +T +++ + K G +E A +F + V +N M
Sbjct: 258 VGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLM 317
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
+ Y Q ++ +F M + P+ T + C+ + G Q H L I+NGF
Sbjct: 318 LVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGF 377
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E+++ V +I MYS+ + + + ++VSW ++IA + QH E+AL F +
Sbjct: 378 ESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKE 437
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G PD I S SAC + + + + V V G + LV++ +R G
Sbjct: 438 MQDCGVWPDNIGLASAASACAGIKAMRQGLQI-HARVYVSGYAADISIWNTLVNLYARCG 496
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
+ E+A+ + + + + D W L++
Sbjct: 497 RSEEAFSLFREIDHK-DEITWNGLISG 522
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 169/344 (49%), Gaps = 8/344 (2%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +I + K+G + +A ++F+++ R+ +S+ AML G+ ++G +A L M + V+
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 207 S----WTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLL 260
+ +++ K + F + R + ++ + FV A+I + G + A +
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F + D V+FN +I+G+AQ G E AL++F M ++PD T+ S+ AC+++ L
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+G+Q H +++ G + +++ +Y +CG I + F N+V WN ++ A+
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
Q K+ F QM G P+ T+ +L C G++ + L +K G
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIK-NGFESD 380
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
L+D+ S+ L+KA +I + M + D W S++A V
Sbjct: 381 MYVSGVLIDMYSKYRCLDKARKILE-MLEKRDVVSWTSMIAGYV 423
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 140/288 (48%), Gaps = 14/288 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ I S+ + AR++ + + +DV++W ++I GY Q+ F +E+ F+ M
Sbjct: 381 MYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD 440
Query: 110 KNIVSWNCMIA----GCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEE 161
+ N +A C + + + + + +N +++ + + GR EE
Sbjct: 441 CGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEE 500
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALSDYMSFKNVVSWTVMITGYVK 217
A LF ++ ++ I++ ++ GF + ++A +S + NV ++ I+
Sbjct: 501 AFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALAN 560
Query: 218 NERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ +++ R + V A+I+ + K G +E+A+++F + ++ VS+N +
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTI 620
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
I +Q+G EAL LF M + ++P+D T + V ACS + L+ EG
Sbjct: 621 ITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEG 668
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 17/142 (11%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++ T V NA IS + G I A+ +F +M+ ++ ++WN IIT Q+G E+
Sbjct: 575 VKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEAL 634
Query: 102 NLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAM---------PERNTATYNA 148
+LF M + N V++ ++A C +++ YF++M P+ Y
Sbjct: 635 DLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDH----YAC 690
Query: 149 MISGFLKHGRLEEATRLFEQMP 170
++ + G+L+ A R ++MP
Sbjct: 691 VVDILGRAGQLDRARRFVDEMP 712
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H + G A+ + N +I +Y++ G + + F+++ S + VSW +++ +AQ G
Sbjct: 66 HATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLG 125
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++A +SQM P S+LSAC
Sbjct: 126 KEAFRLYSQMHWTAVIPTPYVLSSVLSAC 154
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 179/511 (35%), Positives = 283/511 (55%), Gaps = 16/511 (3%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------P 139
++ Y G + S+ F +P K++ +WN MI+ + N +A F + P
Sbjct: 57 LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 116
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+ T G L GR + F+ + NV +++ + + G AR+L D
Sbjct: 117 DFYTFPPVLKACGTLVDGR-KIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDD 175
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELF--YRMPDYDKNVFVVTAMITGF----CKVGM 253
M F+++ SW MI+G ++N +A ++ R+ N V +++ F K+G+
Sbjct: 176 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGL 235
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFT 312
L++A +FE I KD +S+N +I GYAQNG+A EA+ ++ M + ++ P+ T VS+
Sbjct: 236 LDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILP 295
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
A + + L +G + H VI+ +V V +I +Y +CG ++D+ F Q+ + V+
Sbjct: 296 AYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT 355
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WN II+ HGH EK L F +M G PD +TF+SLLSAC H+G V E F LM
Sbjct: 356 WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM- 414
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
+ YGI PS +HY C+VD+L RAG LE A+ + MP + D +WG+LL AC I+ N+ELG
Sbjct: 415 QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELG 474
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNK 552
+ A+ ++ E+D +N YV+LSN+YA G W V +VR L +E+G+ K +S IE+ K
Sbjct: 475 KFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRK 534
Query: 553 VHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
V F G+ SHP +I+ EL+ + +MKS+
Sbjct: 535 VDVFYTGNQSHPKCKEIYEELRVLTAKMKSL 565
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 44/182 (24%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP-----VKN 111
+ ++ G + +A ++F+ + KDVI+WN +ITGY QNG E+ +++ M + N
Sbjct: 227 VDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 286
Query: 112 IVSW------------------------------NCMIAGCIDN-----DRIDDAFDYFQ 136
+W + +A C+ + R+ DA F
Sbjct: 287 QGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFY 346
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDK 192
+P+ ++ T+NA+IS HG E+ +LF +M V +++ ++L G V++
Sbjct: 347 QVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEE 406
Query: 193 AR 194
+
Sbjct: 407 GK 408
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 18/181 (9%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H L++ G ++ + ++ +Y+ G + S F QI ++ +WN++I+A+ +GH+
Sbjct: 39 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHF 98
Query: 387 EKALIFFSQMGL-NGFDPDGITFLSLLSACG---HAGKVNESMDLFELMVKVYGIIPSSE 442
+A+ F Q+ L + PD TF +L ACG K++ F+L + + +S
Sbjct: 99 HEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIH--CWAFKLGFQWNVFVAAS- 155
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
L+ + SR G A + MPF D G W ++++ + N N AA+ + L
Sbjct: 156 ----LIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN------AAQALDVL 204
Query: 503 D 503
D
Sbjct: 205 D 205
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 269/474 (56%), Gaps = 13/474 (2%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRN 173
M A C RI DA F M R+ T+N MI G+ ++ + +L+E+M +
Sbjct: 160 MYAAC---GRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPD 216
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA----RELFY 229
I +L G + +A+ ++ + + T V C A RE++
Sbjct: 217 AIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYD 276
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
++P K++ V TAM++G+ K+GM+++AR +F+R+ KD V ++AMI+GYA++ EAL
Sbjct: 277 QLPS--KHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEAL 334
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
+LF+ M + + PD T++SV +AC+ + L + + H +NGF + + NA+I MY
Sbjct: 335 QLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMY 394
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++CG ++ + F + N++SW+++I AFA HG + A+ F +M +P+G+TF+
Sbjct: 395 AKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFI 454
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
+L AC HAG V E F M+ + I P EHY C+VD+ RA L KA ++ + MPF
Sbjct: 455 GVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPF 514
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ +WGSL++AC + +ELGE AA ++ EL+P + V+LSN+YA W DV V
Sbjct: 515 PPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLV 574
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
R LMK +GV+K+ A S IE+ N+VH F+ D H D+I+ +L Q+K V
Sbjct: 575 RKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLV 628
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 214/474 (45%), Gaps = 51/474 (10%)
Query: 12 LKRILFPPILRILSTPDSCG-NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAAR 70
L R FPP+L+ +S + H F F+ +A I+ + G+I AR
Sbjct: 113 LDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHAD-PFIQSALIAMYAACGRIMDAR 171
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDND 126
LFD+M+ +DV+TWN +I GY QN L++ M + + +++ C
Sbjct: 172 FLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAG 231
Query: 127 RIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
+ Q + + + ++++ + G + A +++Q+P ++++ TAML
Sbjct: 232 NLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLS 291
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY-- 234
G+ K G V AR + D M K++V W+ MI+GY ++ + EA +LF M PD
Sbjct: 292 GYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQIT 351
Query: 235 ------------------------DKNVF-----VVTAMITGFCKVGMLENARLLFERIQ 265
DKN F + A+I + K G L AR +FE +
Sbjct: 352 MLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMP 411
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
K+ +S+++MI +A +G A+ A+ LF M + +++P+ T + V ACS L+ EG++
Sbjct: 412 RKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQK 471
Query: 326 SHVLVI-RNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
+I + ++ +Y R + + EL PN++ W ++++A H
Sbjct: 472 FFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNH 531
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
G E L F+ L +PD L +LS K + + L ++K G+
Sbjct: 532 GEIE--LGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGV 583
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 148/318 (46%), Gaps = 34/318 (10%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ + F+ +A+I + G + +AR LF+++ +D V++N MI GY+QN + L+L+
Sbjct: 147 FHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYE 206
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M +PD L +V +AC+ L+ G+ H + NGF + +++ MY+ CG
Sbjct: 207 EMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCG 266
Query: 354 G-------------------------------ILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
+ D+ F ++ +LV W+ +I+ +A+
Sbjct: 267 AMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAE 326
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+AL F++M PD IT LS++SAC + G + ++ + K G +
Sbjct: 327 SYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADK-NGFGRTLP 385
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
L+D+ ++ G L KA ++ + MP + W S++ A ++ + + +M+E
Sbjct: 386 INNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGDADSAIALFHRMKEQ 444
Query: 503 DPQNSAVYVMLSNLYAAA 520
+ + + V + LYA +
Sbjct: 445 NIEPNGV-TFIGVLYACS 461
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L+ A LF I N ++ +++ E L L+ + + D + + A
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 314 CSALQLLNEGRQSHVLVIRNGF-EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
S L LN G + H L + GF A+ + +A+I MY+ CG I+D+ F ++ ++V+
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WN +I ++Q+ HY+ L + +M +G +PD I ++LSAC HAG ++ + + +
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQF-I 243
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
K G S T LV++ + G + A ++ +P
Sbjct: 244 KDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLP 279
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 310/550 (56%), Gaps = 19/550 (3%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
FV + I ++ G++ +A +++D+MT+ D T N +I+ Y +NGF ++ +F +
Sbjct: 149 FVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNM 208
Query: 108 -PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEEA 162
N +++ M+A C I + + + TA NA+++ + K G +EEA
Sbjct: 209 GTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEA 268
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMIT--GYV 216
+FE + +RN+IS+TA ++GF + G+ KA M N ++++++ G V
Sbjct: 269 EIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCV 328
Query: 217 KNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERI-QPKDCVSFN 273
K+ F + R ++ VFV TA+I + +G ++ A F+++ + VS+N
Sbjct: 329 KD--FIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWN 386
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
A+IAGY N E+A+ F M+K D+ ++ T ++F ACS+ L Q H +I++
Sbjct: 387 ALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKS 446
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
E+N+ V +++I Y++CG + ++ F QI ++VSWN+II A++Q+G KA+
Sbjct: 447 NVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLL 506
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M G P TFL++LSAC H+G V E + F+ MV+ Y I P H +C+VDIL R
Sbjct: 507 RKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGR 566
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
AGQLE A + + + +W LLAAC N N+++ E A+K+ +L+P ++ VYV L
Sbjct: 567 AGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTL 626
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SN+YA G W D R LM+++ ++K+ SWIE+ NK++ F D +HP + K++ +L
Sbjct: 627 SNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKL 686
Query: 574 KRASVQMKSV 583
K+ Q++ +
Sbjct: 687 KQLVRQIQDI 696
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/476 (31%), Positives = 249/476 (52%), Gaps = 14/476 (2%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY 146
+++ Y + G L ++ LF +P NI W + C ++A F M +
Sbjct: 844 LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPN 903
Query: 147 NAMISGFLKH-GRLEEA-------TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD 198
++ LK G L + T + + + +A++ + K G V+KA + D
Sbjct: 904 QFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD 963
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVG---- 252
++ K++V M++GY ++ EA +L +M NV +I GF +VG
Sbjct: 964 WIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSM 1023
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ E RL+ D VS+ ++I+G+ QN E F M+ P T+ S+
Sbjct: 1024 VSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLP 1083
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
AC+ + L G++ H + G E +V V +A++ MY++CG I ++++ F + N V+
Sbjct: 1084 ACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVT 1143
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WN++I +A HG+ +A+ F+QM + D +TF ++L+AC HAG V LF M
Sbjct: 1144 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQ 1203
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
+ Y I P EHY C+VD+L RAG+L +A+ + + MP E D VWG+LL AC + N+EL
Sbjct: 1204 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELA 1263
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
E+AA+ + EL+P++ ++LSNLYA AG W + +++ +MK++ K SWIE
Sbjct: 1264 EVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 5/303 (1%)
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ +++ + + G L NAR LF++I + + + A+ G EEAL FS M K
Sbjct: 838 TYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQK 897
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
++P+ L S+ AC L G H ++++N FE++ + +A+I MYS+CG +
Sbjct: 898 EGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEK 957
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F I +LV N +++ +AQHG +AL +M G P+ +++ +L++
Sbjct: 958 ACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQ 1017
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM---PFEADTG 474
G + ++F LM G+ P +T ++ + + + + M F +
Sbjct: 1018 VGDKSMVSEVFRLMT-ANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSV 1076
Query: 475 VWGSLLAACVINLNVELG-ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
SLL AC N+ G E+ M ++ V L ++YA G + + +M
Sbjct: 1077 TISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMM 1136
Query: 534 KEQ 536
E+
Sbjct: 1137 PER 1139
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 179/422 (42%), Gaps = 88/422 (20%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVK 110
+S + G++S AR+LFD++ ++ W + + GF +E+ + F M P +
Sbjct: 845 MSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQ 904
Query: 111 NIVSWNCMIAGCIDNDR---------------------------------IDDAFDYFQA 137
++ G + + R ++ A F
Sbjct: 905 FVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDW 964
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKA 193
+ +++ NAM+SG+ +HG + EA L ++M + NV+S+ ++ GF + G+
Sbjct: 965 IVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMV 1024
Query: 194 RALSDYMSFK----NVVSWTVMITGYVKNERFCEARELFYRMPD---------------- 233
+ M+ +VVSWT +I+G+V+N E + F M D
Sbjct: 1025 SEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPA 1084
Query: 234 ---------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+K+V+V +A++ + K G + A++LF + ++ V++
Sbjct: 1085 CTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTW 1144
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N++I GYA +G EA+ LF+ M + D + D T +V ACS ++ G +S ++
Sbjct: 1145 NSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELG-ESLFXKMQ 1203
Query: 333 NGF--EANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ E + ++ + R G + ++ +L P+ W ++ A HG+ E A
Sbjct: 1204 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELA 1263
Query: 390 LI 391
+
Sbjct: 1264 EV 1265
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 143/319 (44%), Gaps = 59/319 (18%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
++ +A I S+ G + A ++FD + KD++ NA+++GY Q+GF+ E+ BL Q M
Sbjct: 940 YIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQA 999
Query: 109 -VK-NIVSWNCMIAG---CIDNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEA 162
VK N+VSWN +IAG D + + F A E + ++ ++ISGF+++ E
Sbjct: 1000 GVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEG 1059
Query: 163 TRLFEQM---------------------------------------PRRNVISYTAMLDG 183
F++M ++V +A++D
Sbjct: 1060 FDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDM 1119
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC-EARELFYRMPDYDKNV--FV 240
+ K G + +A+ L M +N V+W +I GY N +C EA ELF +M + D +
Sbjct: 1120 YAKCGYISEAKILFYMMPERNTVTWNSLIFGYA-NHGYCNEAIELFNQMEESDTKLDHLT 1178
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVS-----FNAMIAGYAQNGVAEEALRLFSGM 295
TA++ GM+E LF ++Q K + + M+ + G EA L
Sbjct: 1179 FTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKA- 1237
Query: 296 IKMDMQPDDATLVSVFTAC 314
M ++PD ++ AC
Sbjct: 1238 --MPVEPDKFVWGALLGAC 1254
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 8/214 (3%)
Query: 254 LENARLLFERIQPKDCVSFN----AMIAGYAQNGVAEEALRLFSGMIKMDMQ---PDDAT 306
L NA +LFE+ + VS + + GV E + ++ P
Sbjct: 56 LNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFGGGFPHRQY 115
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+ S + C + GR+ H V++ G ++ VC ++I MY++CG + + + ++
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT 175
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
S + + N +I+A+A++G + +A F Q+G G P+ T+ ++L+ CG + E
Sbjct: 176 SLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQ 235
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
L +VK+ + + L+ + S+ G +E+A
Sbjct: 236 LHAHVVKMQ-YLSETAVGNALLTLYSKCGMMEEA 268
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L GR H ++ G +++ Y+ CG + ++ F +I + N+ W + A
Sbjct: 819 LYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGA 878
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
A+ G YE+AL FS+M G P+ S+L ACGH ++ +++K
Sbjct: 879 CARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSF--- 935
Query: 440 SSEHY--TCLVDILSRAGQLEKAWQI 463
S+ Y + L+ + S+ G +EKA ++
Sbjct: 936 ESDAYIISALIYMYSKCGHVEKACRV 961
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V +A + ++ G IS A+ LF M ++ +TWN++I GY +G+ E+ LF M
Sbjct: 1110 VYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEE 1169
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
+ +++ ++ C ++ F M E+ Y M+ + G+L
Sbjct: 1170 SDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLS 1229
Query: 161 EATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYM 200
EA L + MP + + A+L G ++ A ++++
Sbjct: 1230 EAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHL 1270
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 167/460 (36%), Positives = 262/460 (56%), Gaps = 6/460 (1%)
Query: 127 RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
R+D + F + + A+I G G E+A + QM + V +K
Sbjct: 24 RLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK 83
Query: 187 KGEVDKARALSDY---MSF-KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
++ +AL + F ++ T ++ Y + A++LF MP+ K++ +T
Sbjct: 84 LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE--KSLVSLT 141
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
AM+T + K G L+ AR+LF+ ++ +D V +N MI GY QNG+ EAL LF M+K +P
Sbjct: 142 AMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKP 201
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
++ T++SV +AC L L GR H + NG + NV V A++ MYS+CG + D+ L F
Sbjct: 202 NEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVF 261
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+I ++V+WN++I +A G ++AL F M G P ITF+ +LSACGH+G V
Sbjct: 262 DKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVT 321
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
E D+F M YGI P EHY C+V++L RAG +E+A+++ + M E D +WG+LL A
Sbjct: 322 EGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 381
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
C ++ + LGE + + + + NS Y++LSN+YAA G W V R+R +MK+ GV K+
Sbjct: 382 CRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEP 441
Query: 543 AYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
S IE+ NKVH FL G ++HP +I++ L+ + +KS
Sbjct: 442 GCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKS 481
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 108/482 (22%), Positives = 191/482 (39%), Gaps = 86/482 (17%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQESKN 102
TQ V N S++ + I + L Q D+ ++ Y + G + ++
Sbjct: 68 TQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 127
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
LF +MP K++VS M+ + +D A F M ER+ +N MI G+ ++G EA
Sbjct: 128 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 187
Query: 163 TRLFEQM----PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITG 214
LF +M + N ++ ++L + G ++ R + Y+ NV T ++
Sbjct: 188 LVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDM 247
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
Y K +AR +F ++ DK+V +MI
Sbjct: 248 YSKCGSLEDARLVFDKID--DKDVVAWNSMIV---------------------------- 277
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
GYA G ++EAL+LF M +M + P + T + + +AC + EG
Sbjct: 278 ---GYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGW---------- 324
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ N + Y GI P + + ++ + GH E+A
Sbjct: 325 -----DIFNKMKDEY----GI-----------EPKIEHYGCMVNLLGRAGHVEQAYELVK 364
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
M + +PD + + +LL AC GK+ + EL+V + +S Y L +I +
Sbjct: 365 NMNI---EPDPVLWGTLLGACRLHGKIALGEKIVELLVDQN--LANSGTYILLSNIYAAV 419
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G + ++ M D+GV I +N ++ E A + P+ +Y+ML
Sbjct: 420 GNWDGVARLRTMM---KDSGV-KKEPGCSSIEVNNKVHEFLAGGLNH--PKRKEIYMMLE 473
Query: 515 NL 516
+
Sbjct: 474 EI 475
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 24/291 (8%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++L ++V + +R G + +A+QLFD M K +++ A++T Y ++G L ++
Sbjct: 98 VKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAAR 157
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISGFLKHG 157
LF M ++ V WN MI G N ++A F+ M + N T +++S + G
Sbjct: 158 VLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLG 217
Query: 158 RLEEATRLFEQMPRRNVISY-----TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
LE R N I + TA++D + K G ++ AR + D + K+VV+W MI
Sbjct: 218 ALESG-RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMI 276
Query: 213 TGYVKNERFCEARELFY---RMPDYDKNVFVVTAMITGFCKVGMLENARLLFER------ 263
GY EA +LF RM + N+ + +++ G + +F +
Sbjct: 277 VGYAMXGFSQEALQLFKSMCRMGLHPTNITFI-GILSACGHSGWVTEGWDIFNKMKDEYG 335
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
I+PK + M+ + G E+A L M+++PD ++ AC
Sbjct: 336 IEPK-IEHYGCMVNLLGRAGHVEQAYELVK---NMNIEPDPVLWGTLLGAC 382
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 37/266 (13%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ +G L+ + LF R Q + A+I G+A G+ E+AL ++ M+ ++P+ T
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
S+ C + G+ H ++ GF++++ V ++ +Y+R G ++ ++ F +
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 368 PNLVS-------------------------------WNTIIAAFAQHGHYEKALIFFSQM 396
+LVS WN +I + Q+G +AL+ F +M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
P+ +T LS+LSACG G + ES ++ GI + T LVD+ S+ G
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGAL-ESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 253
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAA 482
LE A + + + D W S++
Sbjct: 254 LEDARLVFDKID-DKDVVAWNSMIVG 278
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/523 (33%), Positives = 296/523 (56%), Gaps = 30/523 (5%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+V NA ++ GK+ AR +FD M +DVI+WN +I+GY++NG++ ++ +F M +
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE 212
Query: 111 NI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEEA 162
++ + M+ C ++ + + + E+ NA+++ +LK GR++EA
Sbjct: 213 SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA 272
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK----- 217
+F++M RR+VI++T M++G+ + G+V+ A L M F+ V V I V
Sbjct: 273 RFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDA 332
Query: 218 ---NERFC----EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
N+ C R+ Y ++ + T++I+ + K ++ +F
Sbjct: 333 LKVNDGKCLHGWAVRQQVY------SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTG 386
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++A+IAG QN + +AL LF M + D++P+ ATL S+ A +AL L + H +
Sbjct: 387 PWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYL 446
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH----SPNLVSWNTIIAAFAQHGHY 386
+ GF +++ ++ +YS+CG + + F I S ++V W +I+ + HG
Sbjct: 447 TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDG 506
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
AL F +M +G P+ ITF S L+AC H+G V E + LF M++ Y + S HYTC
Sbjct: 507 HNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTC 566
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VD+L RAG+L++A+ + +PFE + VWG+LLAACV + NV+LGE+AA K+ EL+P+N
Sbjct: 567 IVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPEN 626
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
+ YV+L+N+YAA G W+D+ +VR +M+ G+ K+ +S IEI
Sbjct: 627 TGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 212/447 (47%), Gaps = 38/447 (8%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV---------- 113
G I+ AR+LF++M ++++N +I Y + G ++ ++F M + +
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 114 ------SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFE 167
M G + + RI ++ R+ NA+++ ++ G++E A +F+
Sbjct: 123 VAKAAGELKSMKLGLVVHGRI------LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFD 176
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVKNERF 221
M R+VIS+ M+ G+ + G ++ A + D+M ++V + + + G++K+
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
+ V A++ + K G ++ AR +F+R++ +D +++ MI GY +
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
+G E AL L M ++P+ T+ S+ + C +N+G+ H +R +++ +
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVS---WNTIIAAFAQHGHYEKALIFFSQMGL 398
++I+MY++C + +L FR + W+ IIA Q+ AL F +M
Sbjct: 357 ETSLISMYAKCKRV---DLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR 413
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+P+ T SLL A + ++M++ + K G + S + T LV + S+ G LE
Sbjct: 414 EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLE 472
Query: 459 KAWQITQGMPFE---ADTGVWGSLLAA 482
A +I G+ + D +WG+L++
Sbjct: 473 SAHKIFNGIQEKHKSKDVVLWGALISG 499
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 123/257 (47%), Gaps = 9/257 (3%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
+++ + + G + AR LFE + +S+N +I Y + G+ +A+ +F M+
Sbjct: 51 ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEG 110
Query: 300 MQ--PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
++ PD T V A L+ + G H ++R+ F + V NA++ MY G +
Sbjct: 111 VKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEM 170
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F + + +++SWNT+I+ + ++G+ AL+ F M D D T +S+L CGH
Sbjct: 171 ARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH 230
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
+ ++ +L V+ + E LV++ + G++++A + M D W
Sbjct: 231 LKDLEMGRNVHKL-VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITW- 287
Query: 478 SLLAACVINLNVELGEL 494
C+IN E G++
Sbjct: 288 ----TCMINGYTEDGDV 300
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 97/260 (37%), Gaps = 42/260 (16%)
Query: 18 PPILRILSTPDSCGN-FTPHSSNCL----IRLFSTQYVFVNNAKISALSRAGKISAARQL 72
P + I S CG+ + CL +R + + + IS ++ ++ ++
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF 132
F + W+AII G QN + ++ LF+ M +++
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV-------------------- 416
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY----TAMLDGFMKKG 188
E N AT N+++ + L +A + + + +S T ++ + K G
Sbjct: 417 -------EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469
Query: 189 EVDKAR----ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVT 242
++ A + + K+VV W +I+GY + A ++F M N T
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFT 529
Query: 243 AMITGFCKVGMLENARLLFE 262
+ + G++E LF
Sbjct: 530 SALNACSHSGLVEEGLTLFR 549
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 253/434 (58%), Gaps = 37/434 (8%)
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+V +++ + K G V+ AR + D M +++VSW MI Y +N EA ++F M
Sbjct: 87 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 146
Query: 233 D-------------------------------------YDKNVFVVTAMITGFCKVGMLE 255
+ D N++V TA++ + K GM++
Sbjct: 147 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 206
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A +FE +Q K V++++M+AGY QN EEAL L+ +M ++ + TL SV ACS
Sbjct: 207 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 266
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L L EG+Q H ++ ++GF +NV V ++ + MY++CG + +S + F ++ NL WNT
Sbjct: 267 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 326
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
II+ FA+H ++ +I F +M +G P+ +TF SLLS CGH G V E F+LM Y
Sbjct: 327 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 386
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
G+ P+ HY+C+VDIL RAG L +A+++ + +PF+ +WGSLLA+C + N+EL E+A
Sbjct: 387 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA 446
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
A+K+ EL+P+N+ +V+LSN+YAA W ++ + R L+++ V K SWI+I +KVH
Sbjct: 447 AEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHT 506
Query: 556 FLGGDMSHPCIDKI 569
F G+ HP I +I
Sbjct: 507 FSVGESGHPRIREI 520
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
D + +V ++ +I + K G +E AR +F+ + + VS+N MI Y +N + EAL +F
Sbjct: 83 DLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIF 142
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M + + T+ SV +AC E ++ H L ++ + N+ V A++ +Y++C
Sbjct: 143 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 202
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I D+ F + + V+W++++A + Q+ +YE+AL+ + + + + T S++
Sbjct: 203 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 262
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC + + E + ++ K G + + VD+ ++ G L +++ I + E +
Sbjct: 263 CACSNLAALIEGKQMHAVICKS-GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ-EKN 320
Query: 473 TGVWGSLLAA 482
+W ++++
Sbjct: 321 LELWNTIISG 330
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 171/355 (48%), Gaps = 16/355 (4%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR+ V + N I+A S+ G + ARQ+FD M + +++WN +I Y +N E+
Sbjct: 79 IIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEA 138
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRID-DAFD-------YFQAMPERNTATYNAMISG 152
++F M + I+ + ++ DA + + + N A++
Sbjct: 139 LDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDL 198
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL---SDYMSF-KNVVSW 208
+ K G +++A ++FE M ++ +++++M+ G+++ ++A L + MS +N +
Sbjct: 199 YAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTL 258
Query: 209 TVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
+ +I E +++ + + NVFV ++ + + K G L + ++F +Q
Sbjct: 259 SSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE 318
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K+ +N +I+G+A++ +E + LF M + M P++ T S+ + C L+ EGR+
Sbjct: 319 KNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 378
Query: 327 HVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAA 379
L+ G NV + ++ + R G + ++ + I P W +++A+
Sbjct: 379 FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 433
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 7/214 (3%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ C+ + E + H +IR E +V++ N +I YS+CG + + F + +
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
LVSWNT+I + ++ +AL F +M GF T S+LSACG E L
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
L VK I + T L+D+ ++ G ++ A Q+ + M + + W S++A V N N
Sbjct: 179 LSVKT-CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKNY 236
Query: 490 ELGELAAKKMRELD-PQN----SAVYVMLSNLYA 518
E L ++ + + QN S+V SNL A
Sbjct: 237 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 270
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 184/598 (30%), Positives = 318/598 (53%), Gaps = 47/598 (7%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+ F +++N + S+ ++SAAR++FD +V ++N +I+ Y + +++ +
Sbjct: 35 IKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAH 94
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--------------------- 140
LF MP + VS+N +IA AF F M E
Sbjct: 95 QLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINV 154
Query: 141 ----------------RNTATYNAMISGFLKHGRLEEATRLFEQMPR-RNVISYTAMLDG 183
+ NA+I+ + K+G L+EA R+F + R+ +S+ +M+
Sbjct: 155 GLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVA 214
Query: 184 FMKKGEVDKARALSDYMSFKNVV----SWTVMITGYVKNERFCEARELFYRM--PDYDKN 237
+M+ E KA L M+ + ++ + ++T + + + ++ Y +N
Sbjct: 215 YMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQN 274
Query: 238 VFVVTAMITGFCKVG-MLENARLLFERIQPKDCVSFNAMIAGYA-QNGVAEEALRLFSGM 295
V + +I + K G + + R +F+ I D V +N MI+GY+ +++EAL F +
Sbjct: 275 SHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQL 334
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN-VSVCNAVITMYSRCGG 354
+ +PDD +LV V +ACS + ++GRQ H L ++ +N +SV NA+I MYS+CG
Sbjct: 335 QGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGN 394
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ D++ F + N VS+N++IA +AQHG ++L F +M F P ITF+S+L+A
Sbjct: 395 LRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAA 454
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G+V + F +M + +GI P + H++C++D+L RAG+L +A ++ + +PF+
Sbjct: 455 CAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFF 514
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
W +LL AC I+ NVEL AA ++ +LDP N+A YVML+N+Y+ G +D VR LM+
Sbjct: 515 XWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMR 574
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATS 592
++GV K+ SWIE+ ++H F+ D HP I KI L+ ++K V E+ ++
Sbjct: 575 DRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSA 632
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C A + L G+ H L I++ + + N + +YS+C + + F H N+ S+
Sbjct: 18 CIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSF 77
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
NT+I+A+A+ + E A F +M PD +++ +L++A G + LF M +
Sbjct: 78 NTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAFQLFLEMRE 133
Query: 434 VY 435
+
Sbjct: 134 AF 135
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 192/630 (30%), Positives = 304/630 (48%), Gaps = 116/630 (18%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV- 109
FV ++ I A GKI +LFD++ KD + WN ++ GY + G L F M +
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 110 ---KNIVSWNCMIAGC--------------------------IDND---------RIDDA 131
N V+++C+++ C I N R DDA
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS--------------- 176
F+ M +T T+N MISG+++ G +EE+ F +M V+
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 177 ------------------------YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+A++D + K V A+ + + +VV +T MI
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 213 TGYVKNERFCEARELFYRM------PD-------------------------------YD 235
+GY+ N + ++ E+F + P+ +D
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ A+I + K G + A +FER+ +D VS+N+MI AQ+ A+ +F M
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ D ++ + +AC+ L + G+ H +I++ ++V + +I MY++CG +
Sbjct: 534 GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNL 593
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSA 414
+ F+ + N+VSWN+IIAA HG + +L F +M +G PD ITFL ++S+
Sbjct: 594 KAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V+E + F M + YGI P EHY C+VD+ RAG+L +A++ + MPF D G
Sbjct: 654 CCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAG 713
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VWG+LL AC ++ NVEL E+A+ K+ +LDP NS YV++SN +A A W VT+VR LMK
Sbjct: 714 VWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMK 773
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
E+ V K YSWIEI + H F+ GD++HP
Sbjct: 774 EREVQKIPGYSWIEINKRTHLFVSGDVNHP 803
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 215/444 (48%), Gaps = 34/444 (7%)
Query: 64 GKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNC 117
G S ++F ++ + + WN+II+ + +NG L ++ + M ++ ++ C
Sbjct: 84 GSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPC 143
Query: 118 MIAGCI---DNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
++ C+ + ID D ++ + N +++I +L++G+++ ++LF+++ +++
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 174 VISYTAMLDGFMKKGEVDKA-RALS----DYMSFKNVVSWTVMITGYVKNERFCEAREL- 227
+ + ML+G+ K G +D + S D +S N V++ +++ C ++ L
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS-PNAVTFDCVLS-------VCASKLLI 255
Query: 228 --------FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
+ D + ++++ + K G ++A LF + D V++N MI+GY
Sbjct: 256 DLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGY 315
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
Q+G+ EE+L F MI + PD T S+ + S + L +Q H ++R+ ++
Sbjct: 316 VQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI 375
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
+ +A+I Y +C G+ ++ F Q +S ++V + +I+ + +G Y +L F +
Sbjct: 376 FLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV 435
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
P+ IT +S+L G + +L ++K G ++D+ ++ G++
Sbjct: 436 KISPNEITLVSILPVIGILLALKLGRELHGFIIK-KGFDNRCNIGCAVIDMYAKCGRMNL 494
Query: 460 AWQITQGMPFEADTGVWGSLLAAC 483
A++I + + + D W S++ C
Sbjct: 495 AYEIFERLS-KRDIVSWNSMITRC 517
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 176/382 (46%), Gaps = 21/382 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ +A I A + +S A+ +F Q + DV+ + A+I+GY NG +S +F+ + V
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL-V 433
Query: 110 KNIVSWNCM-------IAGCIDNDRIDDAFDYF--QAMPERNTATYNAMISGFLKHGRLE 160
K +S N + + G + ++ F + + A+I + K GR+
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK--- 217
A +FE++ +R+++S+ +M+ + A + M + V I+ +
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 218 ---NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+E F +A F +V+ + +I + K G L+ A +F+ ++ K+ VS+N+
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNS 613
Query: 275 MIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIR 332
+IA +G +++L LF M+ K ++PD T + + ++C + ++EG R +
Sbjct: 614 IIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTED 673
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALI 391
G + V+ ++ R G + ++ + + P+ W T++ A H + E A +
Sbjct: 674 YGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEV 733
Query: 392 FFSQMGLNGFDPDGITFLSLLS 413
S+ L DP + L+S
Sbjct: 734 ASSK--LMDLDPSNSGYYVLIS 753
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 8/251 (3%)
Query: 235 DKNVFVVTAMITGFCKVG-MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D+ + + AM F G M L I+P +N++I+ + +NG+ +AL +
Sbjct: 73 DERILGMYAMCGSFSDCGKMFYRLDLRRSSIRP-----WNSIISSFVRNGLLNQALAFYF 127
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ + PD +T + AC AL+ V G + N V +++I Y G
Sbjct: 128 KMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYG 187
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I F ++ + V WN ++ +A+ G + + FS M ++ P+ +TF +LS
Sbjct: 188 KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS 247
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
C ++ + L L+V V G+ L+ + S+ G+ + A ++ + M ADT
Sbjct: 248 VCASKLLIDLGVQLHGLVV-VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADT 305
Query: 474 GVWGSLLAACV 484
W +++ V
Sbjct: 306 VTWNCMISGYV 316
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ--IHS 367
+ ACS LL +G+Q H +I N + ++ MY+ CG D F + +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++ WN+II++F ++G +AL F+ +M G PD TF L+ AC
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 29 SCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRAGKISAARQLFDQMTTKDVIT 83
+C N S I F ++ V+ + I ++ G + AA +F M K++++
Sbjct: 551 ACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS 610
Query: 84 WNAIITGYWQNGFLQESKNLFQSMPVK-----NIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
WN+II +G L++S LF M K + +++ +I+ C +D+ +F++M
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
Query: 139 PER-----NTATYNAMISGFLKHGRLEEATRLFEQMP 170
E Y ++ F + GRL EA + MP
Sbjct: 671 TEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP 707
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 296/551 (53%), Gaps = 27/551 (4%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R Q V V N I+ + G +S AR +F QM D+++WN +I+G +G + S
Sbjct: 932 VVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECS 991
Query: 101 KNLFQSMPVKNIVSWNCMIA-----------GCIDNDRIDDAFDYFQAMPERNTATYNAM 149
+F + ++ +A GC +I +A ++ +
Sbjct: 992 VGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHAC--AMKAGVVLDSFVSTTL 1049
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDY 199
I + K G++EEA LF ++ S+ AM+ G++ G+ KA L ++
Sbjct: 1050 IDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQ 1109
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
++ N + G + ++ + ++ ++FV++ ++ + K G +E+AR
Sbjct: 1110 ITLANAAKAAGGLVGLKQGKQI----QAVVVKRGFNLDLFVISGVLDMYLKCGEMESARR 1165
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F I D V++ MI+G +NG E AL + M +QPD+ T ++ ACS L
Sbjct: 1166 IFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTA 1225
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L +GRQ H ++ + V +++ MY++CG I D+ F++ ++ + SWN +I
Sbjct: 1226 LEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVG 1285
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
AQHG+ E+AL FF +M G PD +TF+ +LSAC H+G V+E+ + F M K+YGI P
Sbjct: 1286 LAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEP 1345
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
EHY+CLVD LSRAG++ +A ++ MPFEA ++ +LL AC + ++ E G+ A+K+
Sbjct: 1346 EIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKL 1405
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
L+P +SA YV+LSN+YAAA W +V R +M++ V K +SW+++ NKVH F+ G
Sbjct: 1406 LALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAG 1465
Query: 560 DMSHPCIDKIH 570
D SH D I+
Sbjct: 1466 DRSHEETDVIY 1476
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 213/489 (43%), Gaps = 42/489 (8%)
Query: 3 CNSY--FHQTYLKRILFPPI--LRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKIS 58
C Y +HQ K+ P + LR+ + + F P + LI + + +A +
Sbjct: 585 CTKYPFYHQ---KKGWKPALMHLRLRAATSTANPFIPPAH--LIHSIPQWFSILRHAIAA 639
Query: 59 ALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP--VKNIVSWN 116
+ GK + AR L +T N +IT Y + G L ++ LF + P +++V+WN
Sbjct: 640 SDLPLGKRAHARILTSGHHPDRFLT-NNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWN 698
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP------ 170
+++ D R D F F+ + + ++ K L + E +
Sbjct: 699 AILSAHADKAR--DGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKI 756
Query: 171 --RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
+ +V A+++ + K G + +AR L D M ++VV W VM+ YV EA LF
Sbjct: 757 GLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLF 816
Query: 229 YRM------PDYDKNVFVVTAMITGFCKVGMLE---------NARLLF--ERIQPKDCVS 271
PD +V + T K +LE +L + D ++
Sbjct: 817 SEFNRTGLRPD---DVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIA 873
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N ++ + Q G EA+ F MI + D T V + + + L L G+Q H +V+
Sbjct: 874 WNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVV 933
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
R+G + VSV N +I MY + G + + F Q++ +LVSWNT+I+ A G E ++
Sbjct: 934 RSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVG 993
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F + G PD T S+L AC G G++ S T L+D+
Sbjct: 994 MFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVY 1053
Query: 452 SRAGQLEKA 460
S++G++E+A
Sbjct: 1054 SKSGKMEEA 1062
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/543 (23%), Positives = 226/543 (41%), Gaps = 95/543 (17%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQM--TTKDVITWNAIITGYW---QNGF--------- 96
F+ N I+ S+ G +S+AR+LFD T++D++TWNAI++ + ++GF
Sbjct: 662 FLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARDGFHLFRLLRRS 721
Query: 97 -----------------LQESKNLFQSM---PVKNIVSWNCMIAGCIDN-----DRIDDA 131
L S + +S+ VK + W+ +AG + N RI +A
Sbjct: 722 FVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREA 781
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR--------------RNVISY 177
F M R+ +N M+ ++ G EA LF + R R V S
Sbjct: 782 RVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSK 841
Query: 178 TAMLDGFMK--KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD-- 233
+L+ +K K K D +V++W ++ +++ EA + F M +
Sbjct: 842 QNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSR 901
Query: 234 -----------------------------------YDKNVFVVTAMITGFCKVGMLENAR 258
D+ V V +I + K G + AR
Sbjct: 902 VACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRAR 961
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL- 317
+F ++ D VS+N MI+G A +G+ E ++ +F +++ + PD T+ SV ACS+L
Sbjct: 962 TVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG 1021
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
+ Q H ++ G + V +I +YS+ G + ++E F +L SWN ++
Sbjct: 1022 GGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMM 1081
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
+ G + KAL + M +G + IT + A G + + + ++VK G
Sbjct: 1082 HGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVK-RGF 1140
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAK 497
+ ++D+ + G++E A +I +P D W ++++ CV N E
Sbjct: 1141 NLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDV-AWTTMISGCVENGQEEHALFTYH 1199
Query: 498 KMR 500
MR
Sbjct: 1200 HMR 1202
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 28/175 (16%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAF 380
G+++H ++ +G + + N +ITMYS+CG + + F S +LV+WN I++A
Sbjct: 645 GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAH 704
Query: 381 ---AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC--------GHAGKVNESMDLFE 429
A+ G + L+ S + + + LLSA G+A K+ D+F
Sbjct: 705 ADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVF- 763
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
V G LV+I ++ G++ +A + GM D +W ++ A V
Sbjct: 764 ----VAG---------ALVNIYAKFGRIREARVLFDGMGLR-DVVLWNVMMKAYV 804
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 192/587 (32%), Positives = 309/587 (52%), Gaps = 29/587 (4%)
Query: 7 FHQTYLKRILFPPILRILSTPDSCGNFTPHS-----SNCLIRLFSTQYVFVNNAKISALS 61
H YLK P S +CG + CLI+ + V ++ +
Sbjct: 97 LHYPYLK----PDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYG 152
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNC 117
+ A LF++M KDV WN +I+ Y+Q+G +++ F M N V+
Sbjct: 153 KCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITT 212
Query: 118 MIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
I+ C ++ + + + ++ +A++ + K G LE A +FEQMP++
Sbjct: 213 AISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKT 272
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELF- 228
V+++ +M+ G+ KG++ L M + V + + +I ++ R E + +
Sbjct: 273 VVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHG 332
Query: 229 YRMPD-YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
Y + + +VFV ++++ + K G +E A +F+ I VS+N MI+GY G E
Sbjct: 333 YTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFE 392
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL LFS M K ++ D T SV TACS L L +G++ H L+I + N V A++
Sbjct: 393 ALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLD 452
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY++CG + ++ F+ + +LVSW ++I A+ HGH AL F++M + PD +
Sbjct: 453 MYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVA 512
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
FL++LSACGHAG V+E F M+ VYGIIP EHY+CL+D+L RAG+L +A++I Q
Sbjct: 513 FLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQN 572
Query: 468 P-FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
P D + +L +AC ++ N++LG A+ + + DP +S+ Y++LSN+YA+A W +V
Sbjct: 573 PEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEV 632
Query: 527 TRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
VR MKE G+ K SWIEI K+ F D SH +HLEL
Sbjct: 633 RVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSH-----LHLEL 674
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 132/248 (53%), Gaps = 4/248 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
++F+ +I + + ++A+ +F+ ++ P + +N ++AGY +N + EAL LF +
Sbjct: 37 DIFLCKTLINQYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKL 96
Query: 296 IKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ ++PD T SVF AC L G+ H +I+ G ++ V ++++ MY +C
Sbjct: 97 LHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNA 156
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ F ++ ++ WNT+I+ + Q G+++ AL +F M GF+P+ +T + +S+
Sbjct: 157 FEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISS 216
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C +N M++ E ++ G + S + LVD+ + G LE A +I + MP +
Sbjct: 217 CARLLDLNRGMEIHEELINS-GFLLDSFISSALVDMYGKCGHLEMAIEIFEQMP-KKTVV 274
Query: 475 VWGSLLAA 482
W S+++
Sbjct: 275 AWNSMISG 282
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 169/405 (41%), Gaps = 75/405 (18%)
Query: 191 DKARALSDYMSFKNVVS-WTVMITGYVKNERFCEARELFYRMPDYD-------------- 235
D A+ + D M +S W ++ GY KN + EA ELF ++ Y
Sbjct: 55 DHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFK 114
Query: 236 ------------------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
++ V ++++ + K E A LF + KD
Sbjct: 115 ACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVAC 174
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N +I+ Y Q+G ++AL F M + +P+ T+ + ++C+ L LN G + H +I
Sbjct: 175 WNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELI 234
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+GF + + +A++ MY +CG + + F Q+ +V+WN++I+ + G +
Sbjct: 235 NSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQ 294
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNES----------------------MDLF- 428
F +M G P T SL+ C + ++ E MDL+
Sbjct: 295 LFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYF 354
Query: 429 -----ELMVKVYGIIPSSE--HYTCLVDILSRAGQLEKAWQITQGMP---FEADTGVWGS 478
EL K++ +IP S+ + ++ G+L +A + M E+D + S
Sbjct: 355 KCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTS 414
Query: 479 LLAACVINLNVELGELAAKKM--RELDPQNSAVYVMLSNLYAAAG 521
+L AC +E G+ + ++LD N V L ++YA G
Sbjct: 415 VLTACSQLAALEKGKEIHNLIIEKKLD-NNEVVMGALLDMYAKCG 458
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 289/554 (52%), Gaps = 69/554 (12%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA-GCIDNDR 127
A +F+ + +++ WN + G+ S PV + + CMI+ G + N
Sbjct: 44 AISVFETIQEPNLLIWNTMFRGH-----------ALSSDPVSALKLYVCMISLGLLPNSY 92
Query: 128 I----------DDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEEATRLFEQM 169
AF Q + + + + ++IS ++++GRLE+A ++F++
Sbjct: 93 TFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDES 152
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P R+V+SYTA++ G+ +G ++ A+ + D + K+VVSW MI+GY + + EA ELF
Sbjct: 153 PHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 212
Query: 230 RM------PD-------------------------------YDKNVFVVTAMITGFCKVG 252
M PD + N+ +V A+I + K G
Sbjct: 213 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 272
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
LE A LFE + KD +S+N +I GY + +EAL LF M++ P+D T++S+
Sbjct: 273 ELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 332
Query: 313 ACSALQLLNEGRQSHVLVIR--NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
AC+ L ++ GR HV + + G S+ ++I MY++CG I + F I +L
Sbjct: 333 ACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 392
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
SWN +I FA HG + + FS+M NG +PD ITF+ LLSAC H+G ++ +F
Sbjct: 393 SSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 452
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M + Y + P EHY C++D+L +G ++A ++ M E D +W SLL AC ++ NVE
Sbjct: 453 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVE 512
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
LGE A+ + +++P+N YV+LSN+YA AG W +V R L+ ++G+ K S IEI
Sbjct: 513 LGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEID 572
Query: 551 NKVHYFLGGDMSHP 564
+ VH F+ GD HP
Sbjct: 573 SVVHEFIIGDKFHP 586
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 206/454 (45%), Gaps = 82/454 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ + IS + G++ A ++FD+ +DV+++ A+I GY G+++ ++ +F +PV
Sbjct: 126 LYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPV 185
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
K++VSWN MI+G + +A + F+ M + N +T ++S + G +E ++
Sbjct: 186 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 245
Query: 166 FEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ A++D + K GE++ A L + + +K+V+SW +I GY +
Sbjct: 246 HSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLY 305
Query: 222 CEARELFYRM------PD--------------------------YDKNVFVV-------T 242
EA LF M P+ DK + V T
Sbjct: 306 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRT 365
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A +F I K S+NAMI G+A +G A+ + +FS M K ++P
Sbjct: 366 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEP 425
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD T V + +ACS +L+ GR + ++ Y
Sbjct: 426 DDITFVGLLSACSHSGMLDLGRH---------------IFRSMTQDYKM----------- 459
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+P L + +I G +++A + M + +PDG+ + SLL AC G V
Sbjct: 460 ----TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM---EPDGVIWCSLLKACKMHGNVE 512
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
+ ++K+ P S Y L +I + AG+
Sbjct: 513 LGESFAQNLIKIEPENPGS--YVLLSNIYATAGR 544
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 171/345 (49%), Gaps = 42/345 (12%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS------FKNVVSWTVMI 212
L A +FE + N++ + M G D AL Y+ N ++ ++
Sbjct: 41 LPYAISVFETIQEPNLLIWNTMFRGHALSS--DPVSALKLYVCMISLGLLPNSYTFPFLL 98
Query: 213 TGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
K++ F E +++ + D +++V T++I+ + + G LE+A +F+ +D V
Sbjct: 99 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVV 158
Query: 271 SFNAMIAGYAQNGVAE-------------------------------EALRLFSGMIKMD 299
S+ A+I GYA G E EAL LF M+K +
Sbjct: 159 SYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 218
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++PD++T+V+V +AC+ + GRQ H + +GF +N+ + NA+I +YS+CG + +
Sbjct: 219 VRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETAC 278
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + +++SWNT+I + Y++AL+ F +M +G P+ +T LS+L AC H G
Sbjct: 279 GLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 338
Query: 420 KVNESMDLFELMVK-VYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
++ + + K + G+ +S T L+D+ ++ G +E A Q+
Sbjct: 339 AIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQV 383
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 316/634 (49%), Gaps = 94/634 (14%)
Query: 17 FPPILRILS-TPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FP +L+ P + H+ C L S VF+ N+ ++ R G + A Q+FD+
Sbjct: 130 FPFVLKACGEIPSLRHGASVHAIVCANGLGSN--VFICNSIVAMYGRCGALDDAHQMFDE 187
Query: 76 MTTK---DVITWNAIITGYWQNGFLQES-------KNLFQSMPVKNIVSWNCMIAGC--- 122
+ + D+++WN+I+ Y Q G + + N + + ++ ++ C
Sbjct: 188 VLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASV 247
Query: 123 -------------IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ N +DD F NA++S + K ++ EA ++FE +
Sbjct: 248 FALQHGKQVHGFSVRNGLVDDVF------------VGNALVSMYAKCSKMNEANKVFEGI 295
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN----VVSWTVMITGYVKNERFCEAR 225
+++V+S+ AM+ G+ + G D A +L M ++ V++W+ +I GY + EA
Sbjct: 296 KKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEAL 355
Query: 226 ELFYRMPDY--DKNVFVVTAMITGFCKVGML----------------------------- 254
++F +M Y + NV + ++++G VG L
Sbjct: 356 DVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVL 415
Query: 255 -------------ENARLLFERIQPKD--CVSFNAMIAGYAQNGVAEEALRLFSGMIKM- 298
AR +F+ I+ KD V++ MI GYAQ+G A +AL+LF+ + K
Sbjct: 416 NGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQK 475
Query: 299 -DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV-SVCNAVITMYSRCGGIL 356
++P+ TL AC+ L L GRQ H +RN E+ V V N +I MYS+ G I
Sbjct: 476 TSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDID 535
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F + N+VSW +++ + HG E+AL F QM GF DGITFL +L AC
Sbjct: 536 AARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACS 595
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
H+G V++ M F MVK +GI P +EHY C+VD+L RAG+L +A ++ + M E VW
Sbjct: 596 HSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVW 655
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
+LL+A I+ N+ELGE AA K+ EL +N Y +LSNLYA A W+DV R+R LMK
Sbjct: 656 VALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHT 715
Query: 537 GVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
G+ K+ SWI+ F GD SHP ++I+
Sbjct: 716 GIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIY 749
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 157/316 (49%), Gaps = 23/316 (7%)
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQM--PRRNVISYTAMLDGFMKKGEVDKARA----- 195
T ++ + +++ G EA L +++ V + A++ +K G +D
Sbjct: 59 TEMFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQM 118
Query: 196 -----LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCK 250
L D+ +F V+ G + + R + NVF+ +++ + +
Sbjct: 119 QRLGWLPDHYTFPFVLK----ACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGR 174
Query: 251 VGMLENARLLFERI---QPKDCVSFNAMIAGYAQNGVAEEALRLFSGM---IKMDMQPDD 304
G L++A +F+ + + +D VS+N+++A Y Q G + ALR+ M + ++PD
Sbjct: 175 CGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDA 234
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
TLV++ AC+++ L G+Q H +RNG +V V NA+++MY++C + ++ F
Sbjct: 235 ITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEG 294
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
I ++VSWN ++ ++Q G ++ AL F M D IT+ ++++ G E+
Sbjct: 295 IKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEA 354
Query: 425 MDLFELMVKVYGIIPS 440
+D+F M ++YG+ P+
Sbjct: 355 LDVFRQM-QLYGLEPN 369
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/438 (36%), Positives = 263/438 (60%), Gaps = 10/438 (2%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E + N +I+ + K G +E A ++F+ M R+++S+ M+ G + ++ + AL +
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMI-GLYTRNRME-SEALDIF 150
Query: 200 MSFKN--------VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
+ +N +S + G + C+ D N++V TA++ + K
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
GM+++A +FE +Q K V++++M+AGY QN EEAL L+ +M ++ + TL SV
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
ACS L L EG+Q H ++ ++GF +NV V ++ + MY++CG + +S + F ++ NL
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
WNTII+ FA+H ++ +I F +M +G P+ +TF SLLS CGH G V E F+LM
Sbjct: 331 LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
YG+ P+ HY+C+VDIL RAG L +A+++ + +PF+ +WGSLLA+C + N+EL
Sbjct: 391 RTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLEL 450
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
E+AA+K+ EL+P+N+ +V+LSN+YAA W ++ + R L+++ V K SWI+I +
Sbjct: 451 AEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKD 510
Query: 552 KVHYFLGGDMSHPCIDKI 569
KVH F G+ HP I +I
Sbjct: 511 KVHTFSVGESGHPRIREI 528
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 175/365 (47%), Gaps = 16/365 (4%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR+ V + N I+A S+ G + ARQ+FD M + +++WN +I Y +N E+
Sbjct: 87 IIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEA 146
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRID-DAFD-------YFQAMPERNTATYNAMISG 152
++F M + I+ + ++ DA + + + N A++
Sbjct: 147 LDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDL 206
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL---SDYMSF-KNVVSW 208
+ K G +++A ++FE M ++ +++++M+ G+++ ++A L + MS +N +
Sbjct: 207 YAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTL 266
Query: 209 TVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
+ +I E +++ + + NVFV ++ + + K G L + ++F +Q
Sbjct: 267 SSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE 326
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K+ +N +I+G+A++ +E + LF M + M P++ T S+ + C L+ EGR+
Sbjct: 327 KNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386
Query: 327 HVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHG 384
L+ G NV + ++ + R G + ++ + I P W +++A+ +
Sbjct: 387 FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYK 446
Query: 385 HYEKA 389
+ E A
Sbjct: 447 NLELA 451
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
D + +V ++ +I + K G +E AR +F+ + + VS+N MI Y +N + EAL +F
Sbjct: 91 DLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIF 150
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M + + T+ SV +AC E ++ H L ++ + N+ V A++ +Y++C
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I D+ F + + V+W++++A + Q+ +YE+AL+ + + + + T S++
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC + + E + ++ K G + + VD+ ++ G L +++ I + E +
Sbjct: 271 CACSNLAALIEGKQMHAVICK-SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ-EKN 328
Query: 473 TGVWGSLLAA 482
+W ++++
Sbjct: 329 LELWNTIISG 338
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 7/214 (3%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ C+ + E + H +IR E +V++ N +I YS+CG + + F + +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
LVSWNT+I + ++ +AL F +M GF T S+LSACG E L
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
L VK I + T L+D+ ++ G ++ A Q+ + M + + W S++A V N N
Sbjct: 187 LSVKT-CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKNY 244
Query: 490 ELGELAAKKMRELD-PQN----SAVYVMLSNLYA 518
E L ++ + + QN S+V SNL A
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 278
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/395 (40%), Positives = 245/395 (62%), Gaps = 13/395 (3%)
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
K L D M N ++ Y K R EAR +F MP ++V T+++ G+ K
Sbjct: 38 KRDRLRDDMVLNNA-----LVDMYAKCGRTWEARCIFDSMPS--RSVVSETSILAGYAKS 90
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
+E+A+++F ++ K+ +++N +IA YAQNG EEA+RLF + + + P T +V
Sbjct: 91 ANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVL 150
Query: 312 TACSALQLLNEGRQSHVLVIRNGF------EANVSVCNAVITMYSRCGGILDSELAFRQI 365
AC + +L G+Q+HV V++ GF E++V V N+++ MY + G I D F ++
Sbjct: 151 NACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM 210
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+ + VSWN +I +AQ+G + AL F +M + +PD +T + +LSACGH+G V+E
Sbjct: 211 AARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGR 270
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
F M + +GI PS +HYTC+VD+L RAG L++A ++ + MP E D+ +W SLL AC +
Sbjct: 271 RHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRL 330
Query: 486 NLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYS 545
+ NVELGE A ++ ELDP+NS YV+LSN+YA G W DV RVR MK++GV+KQ S
Sbjct: 331 HKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCS 390
Query: 546 WIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
WIEIG+K++ FL D HPC ++IH L+ ++M
Sbjct: 391 WIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 425
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 45/286 (15%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
NA++ + K GR EA +F+ MP R+V+S T++L G+ K V+ A+ + M KNV+
Sbjct: 50 NALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVI 109
Query: 207 SWTVMITGYVKNERFCEARELFYRM------PDY-------------------------- 234
+W V+I Y +N EA LF ++ P +
Sbjct: 110 AWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHV 169
Query: 235 -----------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
+ +VFV +++ + K G +++ +FER+ +D VS+NAMI GYAQNG
Sbjct: 170 LKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNG 229
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVC 342
A++AL LF M+ + PD T++ V +AC L++EGR+ H + +G +
Sbjct: 230 RAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHY 289
Query: 343 NAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYE 387
++ + R G + ++E + + + P+ V W +++ A H + E
Sbjct: 290 TCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVE 335
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 140/288 (48%), Gaps = 28/288 (9%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ +NNA + ++ G+ AR +FD M ++ V++ +I+ GY ++ +++++ +F M
Sbjct: 46 MVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVE 105
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA-----TYNAMIS-----GFLKHGR- 158
KN+++WN +IA N ++A F + +R++ TY +++ L+ G+
Sbjct: 106 KNVIAWNVLIAAYAQNGEEEEAIRLFVQL-KRDSIWPTHYTYGNVLNACGNIAVLQLGQQ 164
Query: 159 -----LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
L+E R F+ P +V +++D ++K G +D + + M+ ++ VSW MI
Sbjct: 165 AHVHVLKEGFR-FDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIV 223
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQPKDCVS 271
GY +N R +A LF RM ++N VT +++ G+++ R F + ++
Sbjct: 224 GYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGIT 283
Query: 272 -----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ M+ + G +EA L M +PD S+ AC
Sbjct: 284 PSRDHYTCMVDLLGRAGHLKEAEELIK---DMPTEPDSVLWASLLGAC 328
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 38/222 (17%)
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHV-LVIRNGFEANVSVCNAVITMYSRCG------- 353
PD+ TL SV +AC+ L EGRQ H +V R+ ++ + NA++ MY++CG
Sbjct: 8 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARC 67
Query: 354 ------------------------GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ D+++ F Q+ N+++WN +IAA+AQ+G E+A
Sbjct: 68 IFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEA 127
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV---YGIIPSSEHY-- 444
+ F Q+ + P T+ ++L+ACG+ + ++K + P S+ +
Sbjct: 128 IRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVG 187
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LVD+ + G ++ ++ + M D W +++ N
Sbjct: 188 NSLVDMYLKTGSIDDGAKVFERMAAR-DNVSWNAMIVGYAQN 228
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 128/319 (40%), Gaps = 66/319 (20%)
Query: 38 SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+ C+ ++ V + ++ +++ + A+ +F QM K+VI WN +I Y QNG
Sbjct: 65 ARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEE 124
Query: 98 QESKNLFQSM---------------------------------------------PVKNI 112
+E+ LF + P ++
Sbjct: 125 EEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDV 184
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM--- 169
N ++ + IDD F+ M R+ ++NAMI G+ ++GR ++A LFE+M
Sbjct: 185 FVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCS 244
Query: 170 -PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS-----WTVMITGYVKNERFCE 223
+ ++ +L G VD+ R +M+ + ++ +T M+ + E
Sbjct: 245 NENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKE 304
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL-------LFERIQPKDCVSFNAMI 276
A EL MP + V+ A + G C+ + +N L LFE + P++ + +
Sbjct: 305 AEELIKDMPTEPDS--VLWASLLGACR--LHKNVELGERTAGRLFE-LDPENSGPYVLLS 359
Query: 277 AGYAQNGVAEEALRLFSGM 295
YA+ G + R+ M
Sbjct: 360 NMYAEMGKWADVFRVRRSM 378
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 286/547 (52%), Gaps = 48/547 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
+V+ N ++ Y ++G L ++ +FQ MP ++ V++N M+ GC +A D F AM
Sbjct: 174 NVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMR 233
Query: 140 ERNTA----TYNAMIS-----GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
+ A T++ +++ G L GR + L + NV ++LD + K +
Sbjct: 234 RKGLAATRFTFSTVLTVATGVGDLCLGR--QVHGLVARATSSNVFVNNSLLDFYSKCDCL 291
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVF--------- 239
D+ + L M ++ VS+ VMI GY N LF M +D+
Sbjct: 292 DEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVA 351
Query: 240 --------------------------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
V A+I + K GML+ A+ F K VS+
Sbjct: 352 GSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWT 411
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AMI G QNG EEAL+LF GM + + PD AT S A S L ++ GRQ H +IR+
Sbjct: 412 AMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRS 471
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G ++V +A++ MY++CG + ++ F ++ N +SWN +I+A+A +G + A+ F
Sbjct: 472 GHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMF 531
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
M GF PD +TFLS+LSAC H G E M FELM YGI P EHY+C++D L R
Sbjct: 532 EGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGR 591
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
G+ +K ++ MPFE D +W S+L +C + N +L +AA+K+ + ++ YV+L
Sbjct: 592 VGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVIL 651
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SN++A AG W D V+ +M+++G+ K+ YSW+E+ +KV+ F D ++P I +I EL
Sbjct: 652 SNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDEL 711
Query: 574 KRASVQM 580
+R +M
Sbjct: 712 ERLYKEM 718
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 208/469 (44%), Gaps = 33/469 (7%)
Query: 35 PHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLF--DQMTTKDVITWNAIITGYW 92
PH +N F N +S SR+G++SAA LF +D +TW +I +
Sbjct: 61 PHRNN----------AFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFA 110
Query: 93 Q--NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA------------FDYFQAM 138
++ +LF+ M + + +A ++ F +
Sbjct: 111 SAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGL 170
Query: 139 PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD 198
N N ++ + KHG L A R+F++MP R+ ++Y AM+ G K+G +A L
Sbjct: 171 LHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFA 230
Query: 199 YMSFKNVV----SWTVMITGYVKNERFCEARELFYRMPD-YDKNVFVVTAMITGFCKVGM 253
M K + +++ ++T C R++ + NVFV +++ + K
Sbjct: 231 AMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSSNVFVNNSLLDFYSKCDC 290
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L+ + LF + +D VS+N MIAGYA N A LRLF M + S+ +
Sbjct: 291 LDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSV 350
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
++ + G+Q H ++ G + V NA+I MYS+CG + ++ F + VSW
Sbjct: 351 AGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSW 410
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+I Q+G E+AL F M G PD TF S + A + + L +++
Sbjct: 411 TAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIR 470
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G + S + L+D+ ++ G L++A Q MP E ++ W ++++A
Sbjct: 471 S-GHMSSVFSGSALLDMYTKCGCLDEALQTFDEMP-ERNSISWNAVISA 517
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 175/387 (45%), Gaps = 20/387 (5%)
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTA-TYNAMISGFLKHGRLEEATRLFEQMPR--R 172
N ++ I + R+ A F MP RN A + N M+SG+ + G+L A LF P R
Sbjct: 38 NLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLR 97
Query: 173 NVISYTAMLDGFMKKGEVDKARALS------------DYMSFKNVVSWTVMITGYVKNER 220
+ +++T M+ F + A+S D ++ V++ G
Sbjct: 98 DAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAII 157
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
++ NV V ++ +CK G+L AR +F+ + +D V++NAM+ G +
Sbjct: 158 IASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCS 217
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
+ G EAL LF+ M + + T +V T + + L GRQ H LV R +NV
Sbjct: 218 KEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSSNVF 276
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V N+++ YS+C + + + F ++ + VS+N +IA +A + L F +M
Sbjct: 277 VNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLS 336
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
FD + + SLLS G + + +V + G+ L+D+ S+ G L+ A
Sbjct: 337 FDRQALPYASLLSVAGSVPHIGIGKQIHAQLV-LLGLSSEDLVGNALIDMYSKCGMLDAA 395
Query: 461 WQITQGMPFEADTGV-WGSLLAACVIN 486
T + TGV W +++ CV N
Sbjct: 396 --KTNFINKNDKTGVSWTAMITGCVQN 420
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/534 (22%), Positives = 206/534 (38%), Gaps = 153/534 (28%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V N + A + G ++AAR++F +M +D +T+NA++ G + G E+ +LF +M
Sbjct: 175 VVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRR 234
Query: 110 K--------------------------------------NIVSWNCMIAGCIDNDRIDDA 131
K N+ N ++ D +D+
Sbjct: 235 KGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSSNVFVNNSLLDFYSKCDCLDEM 294
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYT--------- 178
F M ER+ +YN MI+G+ + RLF +M R + Y
Sbjct: 295 KKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSV 354
Query: 179 --------------------------AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
A++D + K G +D A+ + K VSWT MI
Sbjct: 355 PHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMI 414
Query: 213 TGYVKNERFCEARELFYRM------PD-------------------------------YD 235
TG V+N + EA +LF M PD +
Sbjct: 415 TGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHM 474
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+VF +A++ + K G L+ A F+ + ++ +S+NA+I+ YA G A+ A+++F GM
Sbjct: 475 SSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGM 534
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ +PD T +SV +ACS L E C + GI
Sbjct: 535 LCYGFKPDSVTFLSVLSACSHNGLAEE-------------------CMKYFELMEYEYGI 575
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
SP ++ +I + G ++K +M F+ D I + S+L +C
Sbjct: 576 -----------SPWKEHYSCVIDTLGRVGRFDKVQEMLGEM---PFEDDPIIWSSILHSC 621
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEH--YTCLVDILSRAGQLEKAWQITQGM 467
+ + + DL + + + S++ Y L +I ++AG+ E A + + M
Sbjct: 622 ----RTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIM 671
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 204/672 (30%), Positives = 316/672 (47%), Gaps = 123/672 (18%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
LFP I + LS + C + + R FS+ V+N I S+ G + AR++FDQ
Sbjct: 236 LFPGICK-LSNIELCRSIHGY---VFRRDFSSA---VSNGLIDLYSKCGDVDVARRVFDQ 288
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI-------------------VSWN 116
M +D ++W ++ GY NG E LF M + N+ +
Sbjct: 289 MVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKG 348
Query: 117 CMIAGCIDNDRIDD--------------------AFDYFQAMPERNTATYNAMISGFLKH 156
I GC RID A F + R+ ++A+I+ ++
Sbjct: 349 KEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQT 408
Query: 157 GRLEEATRLFEQM------PRR---------------------------------NVISY 177
G EEA LF++M P R ++ +
Sbjct: 409 GYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTG 468
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------ 231
TA++ + K G A + MS +++V+W +I GY + A ++FY++
Sbjct: 469 TALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAIN 528
Query: 232 PD-------------------------------YDKNVFVVTAMITGFCKVGMLENARLL 260
PD ++ + V A+I + K G L +A L
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
Query: 261 FERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
F + KD V++N +IA Y QNG A+EA+ F M + P+ T VSV A + L
Sbjct: 589 FNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAA 648
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
EG H +I+ GF +N V N++I MY++CG + SE F ++ + VSWN +++
Sbjct: 649 FREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSG 708
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+A HGH ++A+ FS M + D ++F+S+LSAC HAG V E +F M Y I P
Sbjct: 709 YAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKP 768
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
EHY C+VD+L RAG ++ + MP E D GVWG+LL +C ++ NV+LGE+A +
Sbjct: 769 DLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHL 828
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
+L+P+N A +V+LS++YA +G W D + R M + G+ K SW+E+ NKVH F G
Sbjct: 829 VKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVG 888
Query: 560 DMSHPCIDKIHL 571
D SHP ++ +HL
Sbjct: 889 DKSHPQLESMHL 900
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 234/486 (48%), Gaps = 47/486 (9%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
+DV ++ Y + G L+ ++ +F MP +++V+WN MIAG ++ +A D+F++M
Sbjct: 162 RDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSM 221
Query: 139 P----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA--MLDGFMKKGEVDK 192
E ++ + + G K +E + + RR+ S + ++D + K G+VD
Sbjct: 222 QLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDV 281
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP-------------------- 232
AR + D M ++ VSW M+ GY N F E ELF +M
Sbjct: 282 ARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAE 341
Query: 233 -----------------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
D ++ V T ++ + K G E A+ LF +Q +D V+++A+
Sbjct: 342 TIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAI 401
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IA Q G EEAL LF M M+P+ TL+S+ AC+ L LL G+ H ++
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADM 461
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++++S A+++MY++CG + F ++ S ++V+WN++I +AQ G A+ F +
Sbjct: 462 DSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYK 521
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
+ L+ +PD T + ++ AC +++ + L+VK+ G L+D+ ++ G
Sbjct: 522 LRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL-GFESDCHVKNALIDMYAKCG 580
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR-ELDPQNSAVYVMLS 514
L A + F D W ++AA + N + + + +MR E NS +V S
Sbjct: 581 SLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFV--S 638
Query: 515 NLYAAA 520
L AAA
Sbjct: 639 VLPAAA 644
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 226/493 (45%), Gaps = 39/493 (7%)
Query: 10 TYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYV--FVNNAKISAL----SRA 63
TY + +P R+LS SC + P L+++ + V F ++ I+ L S
Sbjct: 28 TYTNYLHYP---RLLS---SCKHLNP-----LLQIHAQIIVSGFKHHHSITHLINLYSLF 76
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMI 119
K AR +FD I WN++I Y ++ E+ ++ M K + ++ ++
Sbjct: 77 HKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVL 136
Query: 120 AGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
C + + + + ER+ ++ + K G L+ A +F++MP+R+V+
Sbjct: 137 KACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVV 196
Query: 176 SYTAMLDGFMKKGE----VDKARALSDYMSFKNVVSWTVMITGYVK--NERFCEARELFY 229
++ AM+ G + + VD R++ + VS + G K N C + +
Sbjct: 197 AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
D+ V +I + K G ++ AR +F+++ +D VS+ M+AGYA NG E L
Sbjct: 257 FRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVL 314
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF M +++ + + VS F A + L +G++ H ++ ++++ V ++ MY
Sbjct: 315 ELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY 374
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++CG ++ F + +LV+W+ IIAA Q G+ E+AL F +M P+ +T +
Sbjct: 375 AKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLM 434
Query: 410 SLLSACGHAG--KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
S+L AC K+ +S+ F + + + + T LV + ++ G A M
Sbjct: 435 SILPACADLSLLKLGKSIHCFTVKADMDSDLSTG---TALVSMYAKCGFFTAALTTFNRM 491
Query: 468 PFEADTGVWGSLL 480
D W SL+
Sbjct: 492 S-SRDIVTWNSLI 503
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 166/352 (47%), Gaps = 53/352 (15%)
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM---- 231
S T +++ + + D AR++ D + + W MI Y +++++ EA E++Y M
Sbjct: 65 SITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKG 124
Query: 232 --PD-------------------------------YDKNVFVVTAMITGFCKVGMLENAR 258
PD +++VF+ ++ + K+G L+ AR
Sbjct: 125 LEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAR 184
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F+++ +D V++NAMIAG +Q+ EA+ F M + ++P +L+++F L
Sbjct: 185 EVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLS 244
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
+ R H V R F + VS N +I +YS+CG + + F Q+ + VSW T++A
Sbjct: 245 NIELCRSIHGYVFRRDFSSAVS--NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMA 302
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG-- 436
+A +G + + L F +M L + ++ +S A E++DL E +++G
Sbjct: 303 GYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAA------ETIDL-EKGKEIHGCA 355
Query: 437 ----IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
I T L+ + ++ G+ EKA Q+ G+ D W +++AA V
Sbjct: 356 LQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR-DLVAWSAIIAALV 406
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 118/251 (47%), Gaps = 12/251 (4%)
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
K+ +T +I + + AR +F+ + +N+MI Y ++ EAL ++ M
Sbjct: 61 KHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM 120
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++ ++PD T V AC+ L EG H + R G E +V + ++ MYS+ G +
Sbjct: 121 VEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDL 180
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F ++ ++V+WN +IA +Q +A+ FF M L G +P ++ L+L
Sbjct: 181 KRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGI 240
Query: 416 GHAGKVNESMDLFELMVKVYGII----PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+ EL ++G + SS L+D+ S+ G ++ A ++ M +
Sbjct: 241 CKLSNI-------ELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQ 292
Query: 472 DTGVWGSLLAA 482
D WG+++A
Sbjct: 293 DDVSWGTMMAG 303
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 304/587 (51%), Gaps = 69/587 (11%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
+S + G + R++FD M K+V WN +++ Y + G +ES LF+ M K I
Sbjct: 141 VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI---- 196
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------- 169
+ R + AF+ F + +R+ ++N+MISG++ +G E +++QM
Sbjct: 197 -------EGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDV 249
Query: 170 ---------------------------------PRRNVISYTAMLDGFMKKGEVDKARAL 196
RR S T +LD + K G++D A +
Sbjct: 250 DLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNT-LLDMYSKCGDLDGALRV 308
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGML 254
+ M +NVVSWT MI GY ++ R A +L +M +V +T+++ + G L
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSL 368
Query: 255 ENARLLFERIQPKDCVS----FNAMIAGYAQNGVAEEALRLFSGMIKMD----------M 300
+N + + + I+ + S NA++ YA+ G E A +FS M+ D +
Sbjct: 369 DNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL 428
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+PD T+ V AC++L L G++ H ++RNG+ ++ V NA++ +Y +CG + + L
Sbjct: 429 KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F I S +LVSW +IA + HG+ +A+ F++M G +PD ++F+S+L AC H+G
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + F +M + I P EHY C+VD+LSR G L KA++ + +P D +WG+LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALL 608
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
C ++EL E A+++ EL+P+N+ YV+L+N+YA A W +V R+R + +QG+ K
Sbjct: 609 CGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRK 668
Query: 541 QCAYSWIEIGNKVHYFLGG-DMSHPCIDKIHLELKRASVQMKSVDDF 586
SWIEI KV+ F+ G + SHP I LK+ +MK F
Sbjct: 669 NPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHF 715
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 161/348 (46%), Gaps = 61/348 (17%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
++S + G L+E R+F+ M ++NV + M+ + K G+ ++ L +
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICL-----------F 188
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+M+ ++ +R A ELF ++ D D
Sbjct: 189 KIMVEKGIEGKRPESAFELFDKLCDRD--------------------------------- 215
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
+S+N+MI+GY NG+ E L ++ M+ + + D AT++SV C+ L+ G+ H
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
L I++ FE ++ N ++ MYS+CG + + F ++ N+VSW ++IA + + G +
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDG 335
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC-- 446
A+ QM G D + S+L AC +G ++ D+ + +K + S + C
Sbjct: 336 AIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKANNM--ESNLFVCNA 392
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
L+D+ ++ G +E A V+ +++ +I+ N +GEL
Sbjct: 393 LMDMYAKCGSMEAA------------NSVFSTMVVKDIISWNTMIGEL 428
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 186/424 (43%), Gaps = 64/424 (15%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N + S+ G + A ++F++M ++V++W ++I GY ++G + L Q M + +
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGV 348
Query: 113 ---------VSWNCMIAGCIDNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEA 162
+ C +G +DN + D DY +A E N NA++ + K G +E A
Sbjct: 349 KLDVVAITSILHACARSGSLDNGK--DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAA 406
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+F M +++IS+ M+ G +K A L S + + I GY+ +
Sbjct: 407 NSVFSTMVVKDIISWNTMI-GELKPDSRTMACVLPACASL-SALERGKEIHGYILRNGYS 464
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
R V A++ + K G+L ARLLF+ I KD VS+ MIAGY +
Sbjct: 465 SDRH-------------VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMH 511
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G EA+ F+ M ++PD+ + +S+ ACS LL +G + +++N F
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR-FFYIMKNDFNI----- 565
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
P L + ++ ++ G+ KA F + +
Sbjct: 566 ------------------------EPKLEHYACMVDLLSRTGNLSKAYEFMETLPIA--- 598
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP-SSEHYTCLVDILSRAGQLEKAW 461
PD + +LL C + + + + E +V+ + P ++ +Y L +I + A + E+
Sbjct: 599 PDATIWGALLCGCRNYHDIELAEKVAE---RVFELEPENTGYYVLLANIYAEAEKWEEVK 655
Query: 462 QITQ 465
++ +
Sbjct: 656 RLRE 659
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 55/262 (20%)
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+NA I + Q G E A+ L K +++ T SV C+ L+ +G++ H ++
Sbjct: 69 YNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGKKVHSIIK 126
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN---------------------- 369
N + ++ +++ Y+ CG + + F + N
Sbjct: 127 SNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 370 -----------------------------LVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
++SWN++I+ + +G E+ L + QM G
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
D D T +S+L C ++G ++ + L +K L+D+ S+ G L+ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS-SFERRINFSNTLLDMYSKCGDLDGA 305
Query: 461 WQITQGMPFEADTGVWGSLLAA 482
++ + M E + W S++A
Sbjct: 306 LRVFEKMG-ERNVVSWTSMIAG 326
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 13/189 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V NA + + G + AR LFD + +KD+++W +I GY +G+ E+ F M
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEA 162
I VS+ ++ C + ++ + +F M E Y M+ + G L +A
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588
Query: 163 TRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDY---MSFKNVVSWTVMITGYVKN 218
E +P + + A+L G +++ A +++ + +N + ++ Y +
Sbjct: 589 YEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEA 648
Query: 219 ERFCEAREL 227
E++ E + L
Sbjct: 649 EKWEEVKRL 657
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/572 (31%), Positives = 300/572 (52%), Gaps = 50/572 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N+ + + + A +LFD M +DV++WN +++ Q+G ++E+ ++ M
Sbjct: 204 IFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS 263
Query: 110 KNI-------------------VSWNCMIAG-------CIDN-------------DRIDD 130
K + + W + CID +
Sbjct: 264 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKE 323
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMK 186
A F ++ +RN + +I+GFL+HG E+ LF QM + + ++ G
Sbjct: 324 AKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCS 383
Query: 187 KGEVDKARALSDYM----SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
+ ++ R L + VV +I+ Y K + A +F M + K++ T
Sbjct: 384 RMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNE--KDIVSWT 441
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQ 301
+MIT +VG + AR F+ + K+ +++NAM+ Y Q+G E+ LR+++ M+ + D++
Sbjct: 442 SMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVR 501
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD T V++F C+ L G Q ++ G + SV NAVITMYS+CG IL++
Sbjct: 502 PDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKV 561
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F ++ ++VSWN +I ++QHG ++A+ F + G PD I+++++LS C H+G V
Sbjct: 562 FDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLV 621
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
E F++M +V+ I P EH++C+VD+L RAG L +A + MP + VWG+LL+
Sbjct: 622 QEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLS 681
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC I+ N EL ELAAK + ELD +S Y++++ +YA AG D ++R LM+++G+ K
Sbjct: 682 ACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN 741
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
YSW+E+ NKVH F D+SHP + I +L
Sbjct: 742 PGYSWMEVNNKVHVFKADDVSHPQVIAIRKKL 773
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 212/467 (45%), Gaps = 55/467 (11%)
Query: 29 SCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAII 88
SCG P + L+ + V +N ++ + G++S A +LF +M +DV +WN ++
Sbjct: 51 SCGAL-PDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLM 109
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMI-------AGCIDNDRID----DAFDYFQA 137
+GY+Q+ S F SM S N G + + F +
Sbjct: 110 SGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGS 169
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
+ + A A++ F++ G ++ A+RLF ++ + +ML G++K VD A L
Sbjct: 170 QDDSDVAA--ALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELF 227
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD---------YDKNV---------- 238
D M ++VVSW +M++ ++ R EA ++ M Y ++
Sbjct: 228 DSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLR 287
Query: 239 ------------------FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
+V +A++ + K G + A+ +F + ++ V++ +IAG+
Sbjct: 288 WGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFL 347
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
Q+G E++ LF+ M M D L ++ + C + L GRQ H L +++G V
Sbjct: 348 QHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVV 407
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V N++I+MY++C + +E FR ++ ++VSW ++I A +Q G+ KA FF M
Sbjct: 408 VSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKN 467
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
IT+ ++L A G + + ++ +M+ + P Y L
Sbjct: 468 V----ITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTL 510
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 191/412 (46%), Gaps = 14/412 (3%)
Query: 81 VITWNAIITGYWQNGFLQESKNLFQS-MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
V N ++ Y G L +++ L + + N+++ N M+ G + R+ DA + F MP
Sbjct: 39 VFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMP 98
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK-----GEVDKAR 194
R+ A++N ++SG+ + + + F M R S A + K GE A
Sbjct: 99 ARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLAL 158
Query: 195 AL----SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCK 250
L + S + ++ +V+ A LF R+ + +F +M+ G+ K
Sbjct: 159 QLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKE--PTIFCRNSMLVGYVK 216
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+++A LF+ + +D VS+N M++ +Q+G EAL + M ++ D T S
Sbjct: 217 TYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSS 276
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
TAC+ L L G+Q H VIRN + V +A++ +Y++CG +++ F +H N
Sbjct: 277 LTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNN 336
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
V+W +IA F QHG + +++ F+QM D +L+S C + L L
Sbjct: 337 VAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSL 396
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+K G I + L+ + ++ L+ A I + M E D W S++ A
Sbjct: 397 CLK-SGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMN-EKDIVSWTSMITA 446
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 139/291 (47%), Gaps = 35/291 (12%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q V V+N+ IS ++ + +A +F M KD+++W ++IT + Q G + +++ F M
Sbjct: 404 QAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGM 463
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-PERNT----ATYNAMISGFLKHGRLEEA 162
KN+++WN M+ I + +D + M E++ TY + G G A
Sbjct: 464 STKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLG----A 519
Query: 163 TRLFEQMPRRNV--------ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
+L +Q+ R V A++ + K G + +AR + D+++ K++VSW MITG
Sbjct: 520 NKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITG 579
Query: 215 YVKNERFCEARELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
Y ++ +A E+F + PDY V A+++G G+++ + F+ ++
Sbjct: 580 YSQHGMGKQAIEIFDDILKRGAKPDYISYV----AVLSGCSHSGLVQEGKSYFDMMKRVH 635
Query: 269 CVS-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+S F+ M+ + G EA L +M M+P ++ +AC
Sbjct: 636 NISPGLEHFSCMVDLLGRAGHLTEAKDLID---EMPMKPTAEVWGALLSAC 683
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 144/323 (44%), Gaps = 59/323 (18%)
Query: 23 ILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVI 82
++S C N S+ + R + + + + I+A S+ G I+ AR+ FD M+TK+VI
Sbjct: 412 LISMYAKCDNL--QSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVI 469
Query: 83 TWNAIITGYWQNGFLQESKNLFQSM-PVKNI----VSWNCMIAGCID------------- 124
TWNA++ Y Q+G ++ ++ M K++ V++ + GC D
Sbjct: 470 TWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGR 529
Query: 125 ----------------------NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
RI +A F + ++ ++NAMI+G+ +HG ++A
Sbjct: 530 TVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQA 589
Query: 163 TRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS-----WTVMIT 213
+F+ + +R + ISY A+L G G V + ++ D M + +S ++ M+
Sbjct: 590 IEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVD 649
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV-GMLENARL----LFERIQPKD 268
+ EA++L MP K V + CK+ G E A L +FE P D
Sbjct: 650 LLGRAGHLTEAKDLIDEMP--MKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSP-D 706
Query: 269 CVSFNAMIAGYAQNGVAEEALRL 291
S+ M YA G ++++ ++
Sbjct: 707 SGSYMLMAKIYADAGKSDDSAQI 729
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 304/549 (55%), Gaps = 23/549 (4%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R Q+V V N+ I+ +AG ++ AR++F QM D+I+WN +I+G ++G + S
Sbjct: 323 VVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECS 382
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDN-DRIDDAFDY--------FQAMPERNTATYNAMIS 151
LF + ++ I + +++++ +A ++ A+I
Sbjct: 383 LRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALID 442
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDYMS 201
+ K G++EEA LF ++ S+ AM+ GF +A L +D ++
Sbjct: 443 VYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQIT 502
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
F N + V+ ++ + + +M + ++FV++ ++ + K G +++AR +F
Sbjct: 503 FANAAKAAGCL---VRLQQGKQIHAVVIKMR-FHYDLFVISGILDMYLKCGEMKSARKVF 558
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+I D V++ +I+G +NG E+AL + M +QPD+ T ++ ACS L L
Sbjct: 559 NQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALE 618
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
+G+Q H +++ + V +++ MY++CG I D+ FR++++ ++ WN +I A
Sbjct: 619 QGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLA 678
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
QHG+ E+AL FF++M G PD +TF+ +LSAC H+G +++ F+ M K YG+ P
Sbjct: 679 QHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEI 738
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
EHY+CLVD LSRAG +++A ++ MPFEA ++ +LL AC + + E GE A+K+
Sbjct: 739 EHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFT 798
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
+DP +SA YV+LSN+YAAA W + R +MK V K+ +SWI++ NKVH F+ GD
Sbjct: 799 MDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDR 858
Query: 562 SHPCIDKIH 570
SH D I+
Sbjct: 859 SHEETDLIY 867
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 221/530 (41%), Gaps = 91/530 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A ++ ++ +I AR LFD+M +DV+ WN ++ Y + G E LF +
Sbjct: 157 VFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHR 216
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER--------NTATYNAMISGFLKHG 157
+ VS ++ G + + +A + + +N +S +L+ G
Sbjct: 217 SGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAG 276
Query: 158 RLEEATRLFEQMPRRNV----ISYTAML-------------------------------- 181
EA F M + V ++Y +L
Sbjct: 277 EGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVAN 336
Query: 182 ---DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN-------------------- 218
+ ++K G V+ AR + M +++SW +I+G ++
Sbjct: 337 SAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLP 396
Query: 219 ----------------ERFCEARELFY--RMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
E +C R++ + FV TA+I + K G +E A LL
Sbjct: 397 DQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELL 456
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F D S+NAM+ G+ + EALRLFS M + + D T + A L L
Sbjct: 457 FHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRL 516
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+G+Q H +VI+ F ++ V + ++ MY +CG + + F QI SP+ V+W T+I+
Sbjct: 517 QQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGC 576
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
++G E+AL + QM L G PD TF +L+ AC + + + ++K+
Sbjct: 577 VENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDP 636
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
T LVD+ ++ G +E A+ + + M + +W +++ + N E
Sbjct: 637 FV-MTSLVDMYAKCGNIEDAYGLFRRMNTRS-VALWNAMIVGLAQHGNAE 684
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 207/449 (46%), Gaps = 39/449 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV A++ Y + ++E++ LF MPV+++V WN M+ ++ D+ F A
Sbjct: 156 DVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFH 215
Query: 140 ER----NTATYNAMISGFLKHGRLEE--------ATRLFEQMPRRNVISYTAMLDGFMKK 187
+ + ++ G K E AT+LF +V + L +++
Sbjct: 216 RSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQA 275
Query: 188 GE----VD------KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
GE VD K+R D +++ ++S + ++ A F +D+
Sbjct: 276 GEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRF----GWDQF 331
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
V V + I + K G + AR +F +++ D +S+N +I+G A++G+ E +LRLF +++
Sbjct: 332 VSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLR 391
Query: 298 MDMQPDDATLVSVFTACSAL-QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ PD T+ SV ACS+L + GRQ H ++ G + V A+I +YS+ G +
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
++EL F +L SWN ++ F +Y +AL FS M G D ITF + A G
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAG 511
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLV-----DILSRAGQLEKAWQITQGMPFEA 471
++ + + +++K+ HY V D+ + G+++ A ++ +P
Sbjct: 512 CLVRLQQGKQIHAVVIKM------RFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPD 565
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMR 500
D W ++++ CV N E +MR
Sbjct: 566 DVA-WTTVISGCVENGEEEQALFTYHQMR 593
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 189/433 (43%), Gaps = 51/433 (11%)
Query: 51 FVNNAKISALSRAGKISAARQLFD--QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
+V N I+ ++ G + +AR+LFD + +D++T+NAI+ Y G L
Sbjct: 49 YVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELH---------- 98
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
D ++ +AF F+ + + T +S K L + E
Sbjct: 99 ---------------DVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEA 143
Query: 169 MP--------RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ + +V A+++ + K + +AR L D M ++VV W VM+ YV+
Sbjct: 144 LQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGA 203
Query: 221 FCEARELF--YRMPDYDKNVFVVTAMITGFCKVGMLEN--------ARLLFERIQPKDCV 270
E LF + + V ++ G K + E A LF D
Sbjct: 204 GDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVT 263
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+N ++ Y Q G EA+ F MIK + D T + + + ++L L G+Q H V
Sbjct: 264 VWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV 323
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+R G++ VSV N+ I MY + G + + F Q+ +L+SWNT+I+ A+ G E +L
Sbjct: 324 VRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSL 383
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGK---VNESMDLFELMVKVYGIIPSSEHYTCL 447
F + +G PD T S+L AC + V + L GI+ S T L
Sbjct: 384 RLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKA---GIVLDSFVSTAL 440
Query: 448 VDILSRAGQLEKA 460
+D+ S+ G++E+A
Sbjct: 441 IDVYSKGGKMEEA 453
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP--NLVSWNTIIAAF 380
G+++H +++ +G + V N +ITMY++CG + + F +LV++N I+AA+
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 381 AQHG 384
A G
Sbjct: 92 AHTG 95
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 200/653 (30%), Positives = 320/653 (49%), Gaps = 115/653 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMP 108
VFV N+ + ++ ++ ARQLFD+M K DV++WN++I+ Y NG E+ LF M
Sbjct: 215 VFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQ 274
Query: 109 ----VKNIVSWNCMIAGCIDND-----------------------------------RID 129
N ++ + C D+ ++
Sbjct: 275 KASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMG 334
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN-------VISYTA--- 179
+A + F M + +T ++N+M+SGF+++G EA + + +M VIS A
Sbjct: 335 EAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASA 394
Query: 180 -----------------------------MLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
++D + K + + D M K+VVSWT
Sbjct: 395 RSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTT 454
Query: 211 MITGYVKNERFCEARELF--YRMPDYDKNVFVVTAMITG--------------------- 247
+I G+ +N A ELF ++ D +V ++++++
Sbjct: 455 IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG 514
Query: 248 -------------FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ + G ++ A +FE I+ KD VS+ +MI+ Y NG+A EAL LF
Sbjct: 515 LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHL 574
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + ++PD +LVS+ +A ++L L +G++ H +IR GF S+ + ++ MY+RCG
Sbjct: 575 MKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGT 634
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ S F I + +LV W ++I A+ HG A+ F +M PD I F+++L A
Sbjct: 635 LEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYA 694
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H+G +NE E M Y + P EHY CLVD+L RA LE+A+Q +GM E
Sbjct: 695 CSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAE 754
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VW +LL AC I+ N ELGE+AA+K+ E+DP+N YV++SN+Y+A W+DV VR+ MK
Sbjct: 755 VWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMK 814
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFV 587
G+ K SWIE+GNKVH F+ D SHP +I+ +L + + ++ +V
Sbjct: 815 ASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYV 867
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 219/455 (48%), Gaps = 24/455 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF++ + + G + A +LFD M K + TWNA+I Y NG S L++ M V
Sbjct: 114 VFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRV 173
Query: 110 KNI----VSWNCMIAGC-IDNDRIDDAFDYFQAMPERNTA---TYNAMISGFLKHGRLEE 161
I ++ C++ C + DR A + A+ E + N+++ + K L
Sbjct: 174 SGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNG 233
Query: 162 ATRLFEQMPRR-NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI-------- 212
A +LF++MP + +V+S+ +M+ + G+ +A L M ++ T
Sbjct: 234 ARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACE 293
Query: 213 -TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ ++K F A L Y NVFV A+I + + G + A +F + D +S
Sbjct: 294 DSSFIKQGMFIHATVL---KSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTIS 350
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N+M++G+ QNG+ EAL+ + M +PD ++S+ A + G Q H +
Sbjct: 351 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAM 410
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+NG ++++ V N+++ MY++ + + F ++ ++VSW TIIA AQ+G + +AL
Sbjct: 411 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALE 470
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F ++ L G D D + S+L AC ++ ++ +++ + +VD+
Sbjct: 471 LFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIR--KGLSDLVLQNGIVDVY 528
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
G ++ A ++ + + F+ D W S+++ V N
Sbjct: 529 GECGNVDYAARMFELIEFK-DVVSWTSMISCYVHN 562
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+VF+ T ++ + K G L +A LF+ + K ++NAMI Y NG +L L+ M
Sbjct: 113 SVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMR 172
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ D T + AC L+ G + H L I+ G+ + V V N+++ MY++C +
Sbjct: 173 VSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLN 232
Query: 357 DSELAF-RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F R ++VSWN++I+A++ +G +AL F +M P+ TF++ L AC
Sbjct: 233 GARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQAC 292
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHY------TCLVDILSRAGQLEKAWQITQGMPF 469
+ + + M + ++K S +Y L+ + +R G++ +A I M
Sbjct: 293 EDSSFIKQGMFIHATVLK-------SSYYINVFVANALIAMYARFGKMGEAANIFYNMD- 344
Query: 470 EADTGVWGSLLAACVIN 486
+ DT W S+L+ V N
Sbjct: 345 DWDTISWNSMLSGFVQN 361
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 304 DATLVSVFTACSALQLLNEGRQSHV-LVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D SV C + + L+EG+Q H ++ N +V + ++ MY +CG ++D+E F
Sbjct: 78 DEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLF 137
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+ + +WN +I A+ +G +L + +M ++G D TF +L ACG
Sbjct: 138 DGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRR 197
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ L +K G + +V + ++ L A Q+ MP + D W S+++A
Sbjct: 198 YGAEVHGLAIK-EGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISA 256
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 203/672 (30%), Positives = 315/672 (46%), Gaps = 123/672 (18%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
LFP I + LS + C + + R FS+ V+N I S+ G + AR++FDQ
Sbjct: 236 LFPGICK-LSNIELCRSIHGY---VFRRDFSSA---VSNGLIDLYSKCGDVDVARRVFDQ 288
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI-------------------VSWN 116
M +D ++W ++ GY NG E LF M + N+ +
Sbjct: 289 MVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKG 348
Query: 117 CMIAGCIDNDRIDD--------------------AFDYFQAMPERNTATYNAMISGFLKH 156
I GC RID A F + R+ ++A+I+ ++
Sbjct: 349 KEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQT 408
Query: 157 GRLEEATRLFEQM------PRR---------------------------------NVISY 177
G EEA LF++M P R ++ +
Sbjct: 409 GYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTG 468
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------ 231
TA++ + K G A + MS +++V+W +I GY + A ++FY++
Sbjct: 469 TALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAIN 528
Query: 232 PD-------------------------------YDKNVFVVTAMITGFCKVGMLENARLL 260
PD ++ + V A+I + K G L +A L
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
Query: 261 FERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
F + KD V++N +IA Y QNG A+EA+ F M + P+ T VSV A + L
Sbjct: 589 FNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAA 648
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
EG H +I+ GF +N V N++I MY++CG + SE F ++ + VSWN +++
Sbjct: 649 FREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSG 708
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+A HGH ++A+ FS M + D ++F+S+LSAC H G V E +F M Y I P
Sbjct: 709 YAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKP 768
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
EHY C+VD+L RAG ++ + MP E D GVWG+LL +C ++ NV+LGE+A +
Sbjct: 769 DLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHL 828
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
+L+P+N A +V+LS++YA +G W D + R M + G+ K SW+E+ NKVH F G
Sbjct: 829 VKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVG 888
Query: 560 DMSHPCIDKIHL 571
D SHP ++ +HL
Sbjct: 889 DKSHPQLESMHL 900
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 245/516 (47%), Gaps = 47/516 (9%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
+ FV A AL+ + ++ + +DV ++ Y + G L+ ++ +F MP
Sbjct: 132 FTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP 191
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATR 164
+++V+WN MIAG ++ +A D+F++M E ++ + + G K +E
Sbjct: 192 KRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRS 251
Query: 165 LFEQMPRRNVISYTA--MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+ + RR+ S + ++D + K G+VD AR + D M ++ VSW M+ GY N F
Sbjct: 252 IHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFV 311
Query: 223 EARELFYRMP-------------------------------------DYDKNVFVVTAMI 245
E ELF +M D ++ V T ++
Sbjct: 312 EVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLM 371
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K G E A+ LF +Q +D V+++A+IA Q G EEAL LF M M+P+
Sbjct: 372 VMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
TL+S+ AC+ L LL G+ H ++ ++++S A+++MY++CG + F ++
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
S ++V+WN++I +AQ G A+ F ++ L+ +PD T + ++ AC +++
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
+ L+VK+ G L+D+ ++ G L A + F D W ++AA +
Sbjct: 552 CIHGLIVKL-GFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQ 610
Query: 486 NLNVELGELAAKKMR-ELDPQNSAVYVMLSNLYAAA 520
N + + + +MR E NS +V S L AAA
Sbjct: 611 NGHAKEAISSFHQMRLENFHPNSVTFV--SVLPAAA 644
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 226/493 (45%), Gaps = 39/493 (7%)
Query: 10 TYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYV--FVNNAKISAL----SRA 63
TY + +P R+LS SC + P L+++ + V F ++ I+ L S
Sbjct: 28 TYTNYLHYP---RLLS---SCKHLNP-----LLQIHAQIIVSGFKHHHSITHLINLYSLF 76
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMI 119
K AR +FD I WN++I Y ++ E+ ++ M K + ++ ++
Sbjct: 77 HKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVL 136
Query: 120 AGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
C + + + + ER+ ++ + K G L+ A +F++MP+R+V+
Sbjct: 137 KACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVV 196
Query: 176 SYTAMLDGFMKKGE----VDKARALSDYMSFKNVVSWTVMITGYVK--NERFCEARELFY 229
++ AM+ G + + VD R++ + VS + G K N C + +
Sbjct: 197 AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
D+ V +I + K G ++ AR +F+++ +D VS+ M+AGYA NG E L
Sbjct: 257 FRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVL 314
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF M +++ + + VS F A + L +G++ H ++ ++++ V ++ MY
Sbjct: 315 ELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY 374
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++CG ++ F + +LV+W+ IIAA Q G+ E+AL F +M P+ +T +
Sbjct: 375 AKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLM 434
Query: 410 SLLSACGHAG--KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
S+L AC K+ +S+ F + + + + T LV + ++ G A M
Sbjct: 435 SILPACADLSLLKLGKSIHCFTVKADMDSDLSTG---TALVSMYAKCGFFTAALTTFNRM 491
Query: 468 PFEADTGVWGSLL 480
D W SL+
Sbjct: 492 S-SRDIVTWNSLI 503
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 118/251 (47%), Gaps = 12/251 (4%)
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
K+ +T +I + + AR +F+ + +N+MI Y ++ EAL ++ M
Sbjct: 61 KHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM 120
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++ ++PD T V AC+ L EG H + R G E +V + ++ MYS+ G +
Sbjct: 121 VEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDL 180
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F ++ ++V+WN +IA +Q +A+ FF M L G +P ++ L+L
Sbjct: 181 KRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGI 240
Query: 416 GHAGKVNESMDLFELMVKVYGII----PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+ EL ++G + SS L+D+ S+ G ++ A ++ M +
Sbjct: 241 CKLSNI-------ELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQ 292
Query: 472 DTGVWGSLLAA 482
D WG+++A
Sbjct: 293 DDVSWGTMMAG 303
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 285/540 (52%), Gaps = 44/540 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV NA+I Y + G ++++ +F+SM ++ VSWN +++G + N+ DA +YF+ M
Sbjct: 282 DVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQ 341
Query: 140 ----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY----TAMLDGFMKKGEVD 191
+ + + +I+ + G L + + R + S ++D + K V
Sbjct: 342 NSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVK 401
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP----DYDK----------- 236
+ M K+++SWT +I GY +NE EA LF ++ D D
Sbjct: 402 YMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461
Query: 237 ---------------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
++ + A++ + +VG ++ AR FE I+ KD VS+ +M
Sbjct: 462 GLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSM 521
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I NG+ EAL LF + + ++QPD ++S +A + L L +G++ H +IR GF
Sbjct: 522 ITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGF 581
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ ++++ MY+ CG + +S F + +L+ W ++I A HG KA+ F +
Sbjct: 582 FLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKK 641
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M PD ITFL+LL AC H+G + E FE+M Y + P EHY C+VD+LSR+
Sbjct: 642 MTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSN 701
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
LE+A+ + MP + + +W +LL AC I+ N ELGELAAK++ + D +NS Y ++SN
Sbjct: 702 SLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISN 761
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
++AA G W DV VRL MK G+ K SWIE+ NK+H F+ D SHP D I+L+L +
Sbjct: 762 IFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQ 821
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 215/455 (47%), Gaps = 27/455 (5%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFD--QMTTKDVITWNAIITGYWQNGFLQESKNLFQ 105
++VFV NA I+ + G + AR LFD M +D ++WN+II+ + G E+ +LF+
Sbjct: 178 EFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFR 237
Query: 106 SMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN----TATYNAMISGFLKHG 157
M N ++ + G D + A+ + N NA+I+ + K G
Sbjct: 238 RMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCG 297
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALSDYMSFKNVVSWTVMIT 213
R+E+A R+FE M R+ +S+ +L G ++ A R + + + VS +I
Sbjct: 298 RMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIA 357
Query: 214 GYVKNERFCEARELF-YRMPD-YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
++ + +E+ Y + + D N+ + ++ + K ++ FE + KD +S
Sbjct: 358 ASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLIS 417
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ +IAGYAQN EA+ LF + M D + SV ACS L+ N R+ H V
Sbjct: 418 WTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVF 477
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ A++ + NA++ +Y G I + AF I S ++VSW ++I +G +AL
Sbjct: 478 KRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALE 536
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK----VYGIIPSSEHYTCL 447
F + PD I +S LSA + + + ++ +++ + G I SS L
Sbjct: 537 LFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASS-----L 591
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
VD+ + G +E + ++ + + D +W S++ A
Sbjct: 592 VDMYACCGTVENSRKMFHSVK-QRDLILWTSMINA 625
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 221/480 (46%), Gaps = 39/480 (8%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI-- 119
+ G + A ++FD+M+ + + +WNA++ + +G E+ L++ M V + C
Sbjct: 91 KCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPS 150
Query: 120 ----AGCIDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEATRLFE--QMPR 171
G + R+ + NA+I+ + K G L A LF+ M +
Sbjct: 151 VLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEK 210
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY---VKNERFCEARELF 228
+ +S+ +++ + +G +A +L M V S T V++ F +
Sbjct: 211 EDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI 270
Query: 229 YRM---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ ++ +V+V A+I + K G +E+A +FE + +D VS+N +++G QN +
Sbjct: 271 HGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELY 330
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+AL F M +PD +++++ A L +G++ H IRNG ++N+ + N +
Sbjct: 331 SDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTL 390
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY++C + AF +H +L+SW TIIA +AQ+ + +A+ F ++ + G D D
Sbjct: 391 VDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDP 450
Query: 406 ITFLSLLSACGHAGKVN---------ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
+ S+L AC N DL ++M++ +V++ G
Sbjct: 451 MMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQ-----------NAIVNVYGEVGH 499
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGEL-AAKKMRELDPQNSAVYVMLS 514
++ A + + + D W S++ CV N L VE EL + K + P + A+ LS
Sbjct: 500 IDYARRAFESIR-SKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALS 558
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 24/296 (8%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+ F+ T ++ + K G L +A +F+ + + S+NA++ + +G EA+ L+ M
Sbjct: 78 SAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMR 137
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ + D T SV AC AL G + H + ++ G+ V VCNA+I MY +CG +
Sbjct: 138 VLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLG 197
Query: 357 DSELAFRQI--HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F I + VSWN+II+A G+ +AL F +M G + TF++ L
Sbjct: 198 GARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQG 257
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYT------CLVDILSRAGQLEKAWQITQGMP 468
E +L + ++G + S H+ L+ + ++ G++E A ++ + M
Sbjct: 258 V-------EDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESM- 309
Query: 469 FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV---YVMLSNLYAAAG 521
D W +LL+ V N EL A R D QNS V + NL AA+G
Sbjct: 310 LCRDYVSWNTLLSGLVQN---ELYSDALNYFR--DMQNSGQKPDQVSVLNLIAASG 360
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C A + L +G+Q H L++++ A ++ ++ MY +CG + D+ F ++ + SW
Sbjct: 56 CVAAKALPQGQQLHALLLKSHLSAFLAT--KLVLMYGKCGSLRDAVKVFDEMSERTIFSW 113
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N ++ AF G Y +A+ + M + G D TF S+L ACG G+ ++ + VK
Sbjct: 114 NALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVK 173
Query: 434 V-YGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEA-DTGVWGSLLAACVINLNV 489
YG + C L+ + + G L A + G+ E DT W S+++A V N
Sbjct: 174 CGYGEFV----FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229
Query: 490 ELGELAAKKMREL 502
++M+E+
Sbjct: 230 LEALSLFRRMQEV 242
>gi|297843734|ref|XP_002889748.1| hypothetical protein ARALYDRAFT_471032 [Arabidopsis lyrata subsp.
lyrata]
gi|297335590|gb|EFH66007.1| hypothetical protein ARALYDRAFT_471032 [Arabidopsis lyrata subsp.
lyrata]
Length = 595
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/530 (35%), Positives = 295/530 (55%), Gaps = 55/530 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA+I+ LSR G+I AR+LFD +K V +WN+++ Y + ++++ LF MP +NI+
Sbjct: 19 NAQITHLSRIGQIHEARKLFDSCDSKSVSSWNSMVAVYSASCMPRDAQLLFDEMPERNII 78
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI----SGFLKHGRLEEATRLFEQM 169
SWN +++G + N ID+A + F M ERN ++ ++ S F K + E ++ E M
Sbjct: 79 SWNGLLSGYMKNGEIDEAREVFDLMLERNVVSWTTLVDVAESLFWK---MPEKNKMGESM 135
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
R + I+ T+M+ G K+G VD+AR + D MS ++V++WT M+TGY +N R +AR+LF
Sbjct: 136 MRVSYIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGRNNRVDDARKLFD 195
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFE--RIQPKDCVSFNAM-----------I 276
MP+ K T+M+ + + G +E+A LFE R K F++M I
Sbjct: 196 VMPE--KTEVSWTSMLMSYVQNGRIEDAEELFEAKRRDSKSKEGFDSMKERNDATWQMVI 253
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+ +NG EAL LF M K ++P TL+SV + C++L L+ G+Q H ++R F+
Sbjct: 254 KFHERNGFELEALDLFVLMQKQGVRPTFPTLISVLSVCASLASLHHGKQVHAQLVRCQFD 313
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
++ V + ++TMY +CG +L S+L F + S +++ WN+II+ +A H E+AL F +M
Sbjct: 314 VDLYVASVLMTMYIKCGELLKSKLIFDRFPSKDIIMWNSIISGYASHSLGEEALKIFYEM 373
Query: 397 GLNG-FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
L+G +P+ +TF++ LSAC +AG V E + +FE M V G RAG
Sbjct: 374 PLSGSTEPNEVTFVATLSACSYAGMVEEGLKIFESMESVLG----------------RAG 417
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+ +A ++ M E D VWGSLL AC + ++L E AKK+ E++ +NS
Sbjct: 418 RFNEAMEMIDSMIVEPDAAVWGSLLGACRTHSQLDLAEFCAKKLIEIETENSG------- 470
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL-GGDMSHP 564
+ M V + L+ K G SW E+ KVH F GG SHP
Sbjct: 471 --SPTFMHLKVGGLMLVRKSPGC------SWNEVKFKVHAFTHGGICSHP 512
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 166/399 (41%), Gaps = 67/399 (16%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
S + V ++ R ++ AR+LFD M K ++W +++ Y QNG +++++ LF
Sbjct: 166 MSERSVITWTTMVTGYGRNNRVDDARKLFDVMPEKTEVSWTSMLMSYVQNGRIEDAEELF 225
Query: 105 Q-------------SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT-ATYNAMI 150
+ SM +N +W +I N +A D F M ++ T+ +I
Sbjct: 226 EAKRRDSKSKEGFDSMKERNDATWQMVIKFHERNGFELEALDLFVLMQKQGVRPTFPTLI 285
Query: 151 S--------GFLKHGRLEEATRLFEQMPRRNVISYTA--MLDGFMKKGEVDKARALSDYM 200
S L HG+ A + Q +V Y A ++ ++K GE+ K++ + D
Sbjct: 286 SVLSVCASLASLHHGKQVHAQLVRCQF---DVDLYVASVLMTMYIKCGELLKSKLIFDRF 342
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMP---DYDKNVFVVTAMITGFCKVGMLENA 257
K+++ W +I+GY + EA ++FY MP + N A ++ GM+E
Sbjct: 343 PSKDIIMWNSIISGYASHSLGEEALKIFYEMPLSGSTEPNEVTFVATLSACSYAGMVEEG 402
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
+FE ++ + G A G EA+ + MI ++PD A S+ AC
Sbjct: 403 LKIFESMES---------VLGRA--GRFNEAMEMIDSMI---VEPDAAVWGSLLGACRTH 448
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI- 376
L+ + E + M+ + GG+ + R+ SP SWN +
Sbjct: 449 SQLDLAE----FCAKKLIEIETENSGSPTFMHLKVGGL----MLVRK--SPG-CSWNEVK 497
Query: 377 --IAAFAQ-----HGHYEKALIFFSQM-GL---NGFDPD 404
+ AF H E L ++ GL G++PD
Sbjct: 498 FKVHAFTHGGICSHPEQESILKLLDELDGLLREAGYNPD 536
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 14 RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY---VFVNNAKISALSRAGKISAAR 70
R FP ++ +LS S + H +L Q+ ++V + ++ + G++ ++
Sbjct: 278 RPTFPTLISVLSVCASLASLH-HGKQVHAQLVRCQFDVDLYVASVLMTMYIKCGELLKSK 336
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK-----NIVSWNCMIAGCIDN 125
+FD+ +KD+I WN+II+GY + +E+ +F MP+ N V++ ++ C
Sbjct: 337 LIFDRFPSKDIIMWNSIISGYASHSLGEEALKIFYEMPLSGSTEPNEVTFVATLSAC--- 393
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ M E + +M S + GR EA + + M
Sbjct: 394 --------SYAGMVEEGLKIFESMESVLGRAGRFNEAMEMIDSM 429
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/583 (33%), Positives = 318/583 (54%), Gaps = 22/583 (3%)
Query: 17 FPPILRILS-TPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FP +LR PD H+ ++R V V NA ++ ++ G + AAR++FD
Sbjct: 198 FPCVLRSCGGVPDLTMGREVHAH--VLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDG 255
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCM------IAGCIDNDRID 129
M+ D I+WNA+I G+++N + LF M +++ V N M +A + +D +D
Sbjct: 256 MSLTDCISWNAMIAGHFENHECEAGLELFLHM-LEDEVEPNLMTITSVTVASGLLSD-LD 313
Query: 130 DAFDYFQAMPERNTAT----YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
A + +R AT N++I + GR+ EA +F +M R+ +S+TAM+ G+
Sbjct: 314 FAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYE 373
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD------YDKNVF 239
K G DKA + M NV V + + ++ ++ + + + +
Sbjct: 374 KNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIV 433
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V A++ + K ++E A +F+ + KD +S+++MIAG+ N EAL F M+ D
Sbjct: 434 VANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLA-D 492
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++P+ T ++ AC+A L G++ H V+R G + V NA++ +Y +CG +
Sbjct: 493 VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAW 552
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + ++VSWN ++A F HGH + AL FF++M G PD +TF++LL C AG
Sbjct: 553 AQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAG 612
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
V++ +LF M + Y I+P+ +HY C+VD+LSR G+L + + MP D VWG+L
Sbjct: 613 MVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGAL 672
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
L C I+ N+ELGELAAK + EL+P ++ +V+LS+LYA AGMW +V++VR M+ +G+
Sbjct: 673 LNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLE 732
Query: 540 KQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
SW+E+ +H FL D SHP I +I+ L +MK+
Sbjct: 733 HDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKA 775
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 212/427 (49%), Gaps = 26/427 (6%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM----SF 202
NAM+S ++ G A ++F +MP R+V S+ M+ G+ K G +++A L M +
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGAR 192
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF--VVTAMITGFCKVGMLENARLL 260
+V ++ ++ RE+ + + V V+ A++T + K G +E AR +
Sbjct: 193 PDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKV 252
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ + DC+S+NAMIAG+ +N E L LF M++ +++P+ T+ SV A L L
Sbjct: 253 FDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDL 312
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+ ++ H L ++ GF +V+ CN++I MYS G + ++ F ++ + + +SW +I+ +
Sbjct: 313 DFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGY 372
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
++G +KAL ++ M +N PD +T S L+AC G+++ + L EL G I
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATS-KGFIRY 431
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA-CVINLNVELGELAAKKM 499
LV++ +++ +EKA ++ + MP + D W S++A C + N E +
Sbjct: 432 IVVANALVEMYAKSKIIEKAIEVFKYMP-DKDVISWSSMIAGFCFNHKNFEALYYFRHML 490
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK----------------QCA 543
++ P NS ++ AA G R + + QG+ Q
Sbjct: 491 ADVKP-NSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTG 549
Query: 544 YSWIEIG 550
Y+W + G
Sbjct: 550 YAWAQFG 556
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 223/452 (49%), Gaps = 23/452 (5%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---- 107
+ NA +S L R G+ A ++F +M +DV +WN ++ GY + GFL+E+ +L+ M
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEEAT 163
++ ++ C++ C + + + NA+++ + K G +E A
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVK 217
++F+ M + IS+ AM+ G + E + L +M V ++ + +G +
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310
Query: 218 NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ F + + +V ++I + +G + A +F R++ +D +S+ AMI+
Sbjct: 311 DLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMIS 370
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GY +NG ++AL +++ M ++ PDD T+ S AC++L L+ G + H L GF
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIR 430
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA-QHGHYEKALIFFSQM 396
+ V NA++ MY++ I + F+ + +++SW+++IA F H ++E AL +F M
Sbjct: 431 YIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFE-ALYYFRHM 489
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT--CLVDILSRA 454
L P+ +TF++ L+AC G + ++ +++ GI +SE Y L+D+ +
Sbjct: 490 -LADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLR-QGI--ASEGYVPNALLDLYVKC 545
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
GQ AW G D W +LA V +
Sbjct: 546 GQTGYAWA-QFGAHGTKDVVSWNIMLAGFVAH 576
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 112/250 (44%), Gaps = 15/250 (6%)
Query: 302 PDDATLVSVFTACSALQLLNEGRQS--HVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
PD+ V++F C + G ++ H F + + NA+++M R G +
Sbjct: 92 PDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTF--GLRLGNAMLSMLVRFGETWHAW 149
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F ++ ++ SWN ++ + + G E+AL + +M G PD TF +L +CG
Sbjct: 150 KVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVP 209
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ ++ +++ +G+ + LV + ++ G +E A ++ GM D W ++
Sbjct: 210 DLTMGREVHAHVLR-FGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSL-TDCISWNAM 267
Query: 480 LAACVINLNVELG-ELAAKKMR-ELDPQNSAVYVMLSNLYAAAGMWRDV---TRVRLLMK 534
+A N E G EL + E++P + ++++ A+G+ D+ + L
Sbjct: 268 IAGHFENHECEAGLELFLHMLEDEVEPN----LMTITSVTVASGLLSDLDFAKEIHALAV 323
Query: 535 EQGVTKQCAY 544
++G A+
Sbjct: 324 KRGFATDVAF 333
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 296/521 (56%), Gaps = 24/521 (4%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV N+ ++ G++ AR++FD M + +++WN +I GY++NG ++E+ +F M K
Sbjct: 159 FVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGK 218
Query: 111 NI---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
I V C ++ R A + + E + + +N+++ + K G ++E
Sbjct: 219 GIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGE-DISVWNSLLDMYAKCGNMDE 277
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV----- 216
A +F +M +R+V+S+T M++G++ G+ A L M F++V V + +
Sbjct: 278 AQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACAS 337
Query: 217 ----KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
K+ R + ++ + V V TA+I + K + + +F + + +
Sbjct: 338 LYSLKHGRCLHGWAIRQKL---ESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPW 394
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NA+I+G NG++ +A+ LF M+ + P+DATL S+ A + L L + R H +IR
Sbjct: 395 NAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIR 454
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAFAQHGHYEKAL 390
+GF + + V +I +YS+CG + + F I ++++W+ IIA + HGH E A+
Sbjct: 455 SGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAI 514
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F QM +G P+ ITF S+L AC HAG V+E + LF+ M++ + ++HYTC++D+
Sbjct: 515 SLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDL 574
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L RAG+LE+A+++ + M F + VWG+LL +CVI+ NVELGE+AAK + EL+P N+ Y
Sbjct: 575 LGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNY 634
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
V+L+N+Y+A G WRD VRL+M G+ K A+S IE+ N
Sbjct: 635 VLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 197/445 (44%), Gaps = 48/445 (10%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------ 138
+++ Y G ++ LF + ++ SWN MI ++ DA F M
Sbjct: 60 SSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRR 119
Query: 139 -PERNTATY---------------------------------NAMISGFLKHGRLEEATR 164
P+ T + N++++ ++ G +E A R
Sbjct: 120 WPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARR 179
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVKN 218
+F+ M R ++S+ M++G+ K G V +A + D+M K + V + + Y+K
Sbjct: 180 VFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239
Query: 219 ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+ + +++ V +++ + K G ++ A+++F + +D VS+ M+ G
Sbjct: 240 LEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNG 299
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
Y NG A AL L M ++P+ TL SV +AC++L L GR H IR E+
Sbjct: 300 YILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESE 359
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V V A+I MY++C + S F + WN II+ +G KA+ F QM +
Sbjct: 360 VIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLM 419
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
DP+ T SLL A + ++ ++ +++ G + E T L+DI S+ G LE
Sbjct: 420 EAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLE 478
Query: 459 KAWQITQGMP-FEADTGVWGSLLAA 482
A I G+P + D W +++A
Sbjct: 479 SAHNIFNGIPKKDKDIITWSAIIAG 503
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 161/311 (51%), Gaps = 32/311 (10%)
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
M +D + FV +++ + G +E AR +F+ ++ + VS+N MI GY +NG +EAL
Sbjct: 151 MSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALM 210
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
+F MI ++PD AT+VSV CS L+ L GR+ H LV ++SV N+++ MY+
Sbjct: 211 VFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYA 270
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG + ++++ F ++ ++VSW T++ + +G AL+ M P+ +T S
Sbjct: 271 KCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLAS 330
Query: 411 LLSACG-----------HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
+LSAC H + + ++ E++V+ T L+D+ ++ +
Sbjct: 331 VLSACASLYSLKHGRCLHGWAIRQKLE-SEVIVE-----------TALIDMYAKCNNVNL 378
Query: 460 AWQITQGMPFEADTGVWGSLLAACVIN-LNVELGELAAKKMRE-LDPQNSAV------YV 511
++++ + T W ++++ C+ N L+ + EL + + E +DP ++ + Y
Sbjct: 379 SFRVFSKTS-KQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYA 437
Query: 512 MLSNLYAAAGM 522
L++L A M
Sbjct: 438 FLTDLQQARNM 448
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
+++++ + G +AR LF+ ++ S+NAMI Y +G++ +AL LF M+
Sbjct: 58 LLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASG 117
Query: 300 MQ-PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ PD+ T V AC L G H + +GF+++ V N+++ MY CG + +
Sbjct: 118 RRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVA 177
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F + LVSWNT+I + ++G ++AL+ F M G +PD T +S+L C +
Sbjct: 178 RRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYL 237
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
++ + L V+V + + L+D+ ++ G +++A I M + D W +
Sbjct: 238 KELEVGRRVHAL-VEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMD-KRDVVSWTT 295
Query: 479 LLAACVIN 486
++ ++N
Sbjct: 296 MMNGYILN 303
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 190/433 (43%), Gaps = 57/433 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V N+ + ++ G + A+ +F +M +DV++W ++ GY NG + + L Q M
Sbjct: 259 ISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQF 318
Query: 110 K----NIVSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ N V+ +++ C + + R + Q + E A+I + K +
Sbjct: 319 ESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKL-ESEVIVETALIDMYAKCNNVN 377
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYV 216
+ R+F + ++ + A++ G + G KA L M + N + ++ Y
Sbjct: 378 LSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYA 437
Query: 217 KNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI--QPKDCVSF 272
+AR + + + + V T +I + K G LE+A +F I + KD +++
Sbjct: 438 FLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITW 497
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
+A+IAGY +G E A+ LF M++ ++P++ T S+ ACS L++EG ++
Sbjct: 498 SAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLE 557
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
D++++ R H + +I + G E+A
Sbjct: 558 ------------------------DNQMSLRTDH------YTCVIDLLGRAGRLEEAYEL 587
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-VYGIIP-SSEHYTCLVDI 450
M F P+ + +LL +C ++E+++L E+ K ++ + P ++ +Y L +I
Sbjct: 588 IRTM---AFRPNHAVWGALLGSC----VIHENVELGEVAAKWLFELEPGNTGNYVLLANI 640
Query: 451 LSRAGQLEKAWQI 463
S G+ A +
Sbjct: 641 YSAVGRWRDAEHV 653
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 296/521 (56%), Gaps = 24/521 (4%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV N+ ++ G++ AR++FD M + +++WN +I GY++NG ++E+ +F M K
Sbjct: 159 FVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGK 218
Query: 111 NI---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
I V C ++ R A + + E + + +N+++ + K G ++E
Sbjct: 219 GIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGE-DISVWNSLLDMYAKCGNMDE 277
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV----- 216
A +F +M +R+V+S+T M++G++ G+ A L M F++V V + +
Sbjct: 278 AQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACAS 337
Query: 217 ----KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
K+ R + ++ + V V TA+I + K + + +F + + +
Sbjct: 338 LYSLKHGRCLHGWAIRQKL---ESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPW 394
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NA+I+G NG++ +A+ LF M+ + P+DATL S+ A + L L + R H +IR
Sbjct: 395 NAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIR 454
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAFAQHGHYEKAL 390
+GF + + V +I +YS+CG + + F I ++++W+ IIA + HGH E A+
Sbjct: 455 SGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAI 514
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F QM +G P+ ITF S+L AC HAG V+E + LF+ M++ + ++HYTC++D+
Sbjct: 515 SLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDL 574
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L RAG+LE+A+++ + M F + VWG+LL +CVI+ NVELGE+AAK + EL+P N+ Y
Sbjct: 575 LGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNY 634
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
V+L+N+Y+A G WRD VRL+M G+ K A+S IE+ N
Sbjct: 635 VLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 197/445 (44%), Gaps = 48/445 (10%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------ 138
+++ Y G ++ LF + ++ SWN MI ++ DA F M
Sbjct: 60 SSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRR 119
Query: 139 -PERNTATY---------------------------------NAMISGFLKHGRLEEATR 164
P+ T + N++++ ++ G +E A R
Sbjct: 120 WPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARR 179
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVKN 218
+F+ M R ++S+ M++G+ K G V +A + D+M K + V + + Y+K
Sbjct: 180 VFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239
Query: 219 ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+ + +++ V +++ + K G ++ A+++F + +D VS+ M+ G
Sbjct: 240 LEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNG 299
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
Y NG A AL L M ++P+ TL SV +AC++L L GR H IR E+
Sbjct: 300 YILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESE 359
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V V A+I MY++C + S F + WN II+ +G KA+ F QM +
Sbjct: 360 VIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLM 419
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
DP+ T SLL A + ++ ++ +++ G + E T L+DI S+ G LE
Sbjct: 420 EAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLE 478
Query: 459 KAWQITQGMP-FEADTGVWGSLLAA 482
A I G+P + D W +++A
Sbjct: 479 SAHNIFNGIPKKDKDIITWSAIIAG 503
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 161/311 (51%), Gaps = 32/311 (10%)
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
M +D + FV +++ + G +E AR +F+ ++ + VS+N MI GY +NG +EAL
Sbjct: 151 MSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALM 210
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
+F MI ++PD AT+VSV CS L+ L GR+ H LV ++SV N+++ MY+
Sbjct: 211 VFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYA 270
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG + ++++ F ++ ++VSW T++ + +G AL+ M P+ +T S
Sbjct: 271 KCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLAS 330
Query: 411 LLSACG-----------HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
+LSAC H + + ++ E++V+ T L+D+ ++ +
Sbjct: 331 VLSACASLYSLKHGRCLHGWAIRQKLE-SEVIVE-----------TALIDMYAKCNNVNL 378
Query: 460 AWQITQGMPFEADTGVWGSLLAACVIN-LNVELGELAAKKMRE-LDPQNSAV------YV 511
++++ + T W ++++ C+ N L+ + EL + + E +DP ++ + Y
Sbjct: 379 SFRVFSKXS-KQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYA 437
Query: 512 MLSNLYAAAGM 522
L++L A M
Sbjct: 438 FLTDLQQARNM 448
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
+++++ + G +AR LF+ ++ S+NAMI Y +G++ +AL LF M+
Sbjct: 58 LLSSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASG 117
Query: 300 MQ-PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ PD+ T V AC L G H + +GF+++ V N+++ MY CG + +
Sbjct: 118 RRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVA 177
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F + LVSWNT+I + ++G ++AL+ F M G +PD T +S+L C +
Sbjct: 178 RRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYL 237
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
++ + L V+V + + L+D+ ++ G +++A I M + D W +
Sbjct: 238 KELEVGRRVHAL-VEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMD-KRDVVSWTT 295
Query: 479 LLAACVIN 486
++ ++N
Sbjct: 296 MMNGYILN 303
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 190/433 (43%), Gaps = 57/433 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V N+ + ++ G + A+ +F +M +DV++W ++ GY NG + + L Q M
Sbjct: 259 ISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQF 318
Query: 110 K----NIVSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ N V+ +++ C + + R + Q + E A+I + K +
Sbjct: 319 ESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKL-ESEVIVETALIDMYAKCNNVN 377
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYV 216
+ R+F + ++ + A++ G + G KA L M + N + ++ Y
Sbjct: 378 LSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYA 437
Query: 217 KNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI--QPKDCVSF 272
+AR + + + + V T +I + K G LE+A +F I + KD +++
Sbjct: 438 FLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITW 497
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
+A+IAGY +G E A+ LF M++ ++P++ T S+ ACS L++EG ++
Sbjct: 498 SAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLE 557
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
D++++ R H + +I + G E+A
Sbjct: 558 ------------------------DNQMSLRTDH------YTCVIDLLGRAGRLEEAYEL 587
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-VYGIIP-SSEHYTCLVDI 450
M F P+ + +LL +C ++E+++L E+ K ++ + P ++ +Y L +I
Sbjct: 588 IRTM---AFRPNHAVWGALLGSC----VIHENVELGEVAAKWLFELEPGNTGNYVLLANI 640
Query: 451 LSRAGQLEKAWQI 463
S G+ A +
Sbjct: 641 YSAVGRWRDAEHV 653
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 303/545 (55%), Gaps = 38/545 (6%)
Query: 67 SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV----SWNCMIAGC 122
+ A ++FD+M ++++TW +IT + Q G +++ +LF M + V +++ +++ C
Sbjct: 7 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66
Query: 123 IDNDRIDDAFDYFQAMPERNTA-------TYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
+ + + A + M + G ++++ ++FEQMP NV+
Sbjct: 67 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 126
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF----YRM 231
S+TA++ + + GE DK + + + MI+G+++ F + L
Sbjct: 127 SWTAIITAYAQSGECDK----------EAIELFCKMISGHIRPNHFSFSSVLKACGNLSD 176
Query: 232 PDYDKNVF-------------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
P + V+ V ++I+ + + G +E+AR F+ + K+ VS+NA++ G
Sbjct: 177 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 236
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
YA+N +EEA LF+ + + T S+ + +++ + +G Q H +++ G+++N
Sbjct: 237 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 296
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+CNA+I+MYSRCG I + F ++ N++SW ++I FA+HG +AL F +M
Sbjct: 297 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 356
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
G P+ IT++++LSAC H G ++E F M K +GI+P EHY C+VD+L R+G L
Sbjct: 357 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLV 416
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+A + MP AD VW +LL AC ++ N ELG AA+ + E +P + A Y++LSNL+A
Sbjct: 417 EAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 476
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASV 578
+AG W+DV ++R MKE+ + K+ SWIE+ N+VH F G+ SHP +I+ EL + +
Sbjct: 477 SAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLAS 536
Query: 579 QMKSV 583
++K +
Sbjct: 537 KIKEM 541
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 181/344 (52%), Gaps = 23/344 (6%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFL-QESKNLFQSMPVKNI----VSWNCM 118
G + +R++F+QM +V++W AIIT Y Q+G +E+ LF M +I S++ +
Sbjct: 108 GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSV 167
Query: 119 IAGC---IDNDRIDDAFDYFQAMPERNT-ATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
+ C D + + Y + + N++IS + + GR+E+A + F+ + +N+
Sbjct: 168 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 227
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELFYR 230
+SY A++DG+ K + ++A L + ++ + ++ +++G + ++ R
Sbjct: 228 VSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGR 287
Query: 231 M--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+ Y N + A+I+ + + G +E A +F ++ ++ +S+ +MI G+A++G A A
Sbjct: 288 LLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRA 347
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVIT 347
L +F M++ +P++ T V+V +ACS + +++EG++ + + +G + ++
Sbjct: 348 LEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVD 407
Query: 348 MYSRCGGILDSELAFRQIHSPNLVS----WNTIIAAFAQHGHYE 387
+ R G +++ A I+S L++ W T++ A HG+ E
Sbjct: 408 LLGRSGLLVE---AMEFINSMPLMADALVWRTLLGACRVHGNTE 448
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 140/313 (44%), Gaps = 33/313 (10%)
Query: 18 PPILRILSTPDSCGNFT-PHSSNCL----IRLFSTQYVFVNNAKISALSRAGKISAARQL 72
P S +CGN + P++ + ++L V N+ IS +R+G++ AR+
Sbjct: 159 PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKA 218
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----------VSWNCMIAGC 122
FD + K+++++NAI+ GY +N +E+ LF + I +S I
Sbjct: 219 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 278
Query: 123 IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
++I + + N NA+IS + + G +E A ++F +M RNVIS+T+M+
Sbjct: 279 GKGEQIHGRL--LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 336
Query: 183 GFMKKGEVDKARALSDYM----SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV 238
GF K G +A + M + N +++ +++ E ++ F M K
Sbjct: 337 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY---KEH 393
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQ-----P--KDCVSFNAMIAGYAQNGVAEEALRL 291
+V M C V +L + LL E ++ P D + + ++ +G E L
Sbjct: 394 GIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTE--LGR 451
Query: 292 FSGMIKMDMQPDD 304
+ + ++ +PDD
Sbjct: 452 HAAEMILEQEPDD 464
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 297/599 (49%), Gaps = 78/599 (13%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
++F +KI AL++ G+I++AR+LFD+M KD + WNA++ Y Q G Q++ LF M
Sbjct: 4 HLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMR 63
Query: 109 VKNI-------------------------VSWNCMIAGC-----IDNDRID--------- 129
+ N + +++GC + N ID
Sbjct: 64 IANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSAT 123
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
A F+ M N ++ +++ + G + A +F+ MP++ I++ M+ G+ + G+
Sbjct: 124 SARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGD 183
Query: 190 VDKARAL----------SDYMSFKNVV---------SWTVMITGYVKNERFCEAREL--- 227
V+ L D +F +V S+ M+ G++ + +A E+
Sbjct: 184 VELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNS 243
Query: 228 ---FYRMPDYDKNVFVV------------TAMITGFCKVGMLENARLLFERIQPKDCVSF 272
FY +V V AMI K+G A L+F+ K+ VS+
Sbjct: 244 ILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSW 303
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
+MI GYA+NG E+AL F M++ +QPDD T +V ACS+L L G+ H +I
Sbjct: 304 TSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIH 363
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
GF A V V N ++ MY++CG I S AF++I +LVSWN ++ HGH +AL
Sbjct: 364 YGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALEL 423
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
+ +M +G PD +TF+ LL C H+G + + LFE MV VYG+ +EH C+VD+L
Sbjct: 424 YEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLG 483
Query: 453 RAGQLEKAWQITQ--GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
R G L +A ++ A+T + +LL AC + V +G + ++ +PQ Y
Sbjct: 484 RGGYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSY 543
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
V+LSNLY +G W++ VR M + GV K SWIE+ NKV F+ G+ SHP ++++
Sbjct: 544 VLLSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHPYMEEL 602
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 265/473 (56%), Gaps = 38/473 (8%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N ++ ++K L A RLF++M R++ S+ M+ G+ K G + +AR L D M+ ++
Sbjct: 128 NRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNF 187
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDY-------------------------------- 234
SWT M +GYV++++ EA ELF M +
Sbjct: 188 SWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGH 247
Query: 235 ------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
D + V +A+ + K G + AR +F++ +D VS+ AMI Y + G EE
Sbjct: 248 ILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEG 307
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
LFS ++K + P++ T V AC+ G+Q H + R GF+ + + ++ M
Sbjct: 308 FALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHM 367
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y++CG I ++ F + P+LVSW ++I+ +AQ+G ++AL FF + +G PD ITF
Sbjct: 368 YTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITF 427
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+ +LSAC HAG V++ ++ F+ + + +G+ +++HY CL+D+LSR+G+L++A I MP
Sbjct: 428 VGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMP 487
Query: 469 FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTR 528
E D +W SLL C I+ N++L + AA+ + E++P+N A Y L+N+YA AG+W V
Sbjct: 488 IEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAE 547
Query: 529 VRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
VR +M +GV K+ SWIEI +VH FL GD SH +IH L + S +MK
Sbjct: 548 VRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMK 600
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 183/388 (47%), Gaps = 48/388 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V ++N + + + A++LFD+M +D+ +WN +I+GY + G LQE++ LF M
Sbjct: 124 VVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTE 183
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER---------------------------- 141
++ SW M +G + +D+ ++A + F+AM
Sbjct: 184 RDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKE 243
Query: 142 ------------NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
+ ++A+ + K G + EA +F++ R+V+S+TAM+D + K+G
Sbjct: 244 IHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGR 303
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY------DKNVFVVTA 243
++ AL + + +G + A EL ++ Y D + F +
Sbjct: 304 REEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAAST 363
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
++ + K G ++NAR +F + D VS+ ++I+GYAQNG +EAL+ F ++K QPD
Sbjct: 364 LVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPD 423
Query: 304 DATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
T V V +AC+ L+++G + + ++G +I + SR G + ++E
Sbjct: 424 HITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDII 483
Query: 363 RQIH-SPNLVSWNTIIAAFAQHGHYEKA 389
++ P+ W +++ HG+ + A
Sbjct: 484 DKMPIEPDKFLWASLLGGCRIHGNLKLA 511
>gi|302820136|ref|XP_002991736.1| hypothetical protein SELMODRAFT_40989 [Selaginella moellendorffii]
gi|300140417|gb|EFJ07140.1| hypothetical protein SELMODRAFT_40989 [Selaginella moellendorffii]
Length = 589
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 290/527 (55%), Gaps = 41/527 (7%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQ-NGFLQESKNLFQSMPVKNI 112
NA I +R G+ A++LFD +DV+ WNA+I G +++ ++LF +P ++
Sbjct: 64 NAMIGGFAREGRFLEAKRLFDAAKVRDVVIWNALIHAKAAVTGGIEDVESLFSRIPCWDV 123
Query: 113 VSWNCMIAGCIDNDRIDDA---FD-------------------------------YFQAM 138
+SWN M+A + ++ A FD +F+ M
Sbjct: 124 ISWNEMLAAYTKHGSLNRAKAFFDTRMLQRDVFSWNTMAAAFARMVHQSGAAGKKFFERM 183
Query: 139 PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD 198
P+ NT ++N++ G ++G ++A LFE M R+ +S M + + G ++A+ L
Sbjct: 184 PQHNTVSWNSIAQGLSENGLFDDAKSLFESMGDRDSVSMIQMAVTYARNGHPEQAQELFS 243
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
+S + V W ++ Y +N E F+R+P ++ T +I + + G L +AR
Sbjct: 244 RISPRTVAVWNALLWSYARNGHLSETLATFHRIPMMNR--ITCTVIIEMYGECGSLIDAR 301
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK--MDMQPDDATLVSVFTACSA 316
+F+R + S+N M+A YA NG + EAL L M + PD T V + ACS
Sbjct: 302 KVFDRTPDPNIFSWNIMLAAYAHNGHSNEALVLSQRMKDSGATVVPDRVTYVILLHACSN 361
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L EGR H VI +G E+NV V A++ MY +CG + D+++ F ++ + +++ WN++
Sbjct: 362 LGALREGRMIHASVIASGMESNVVVATAIVNMYGKCGSMGDAKMVFDKMPAKDVICWNSM 421
Query: 377 IAAFAQHGHYEKALIFFSQM--GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
I+A+A +G + AL +++M G P+ ITF+SLLS+C A + E++ F++M+
Sbjct: 422 ISAYALNGLGKSALDLYARMRHSCRGLKPNRITFVSLLSSCSAANSLREAVFYFQIMIHD 481
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
I P +EHY L+D+L R+G++ +A ++ MPF G W SLLAAC + VELG
Sbjct: 482 CDIQPGAEHYHFLIDLLGRSGKVAEAEELINSMPFAPGCGAWMSLLAACERHSKVELGRR 541
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AA ++ E++P+N+ Y+ML +Y AAGMW ++ +++ LM+++G+ ++
Sbjct: 542 AADRVFEMEPKNALAYLMLGKIYVAAGMWDELLQLKKLMEDRGLKRE 588
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 229/480 (47%), Gaps = 30/480 (6%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N I++ + AG + A ++F M ++V++WN +++ Q G +K +P ++V
Sbjct: 2 NILIASYASAGLLEEAWKIFHAMPGRNVVSWNTMVSANAQEGDFSRAKIFLARIPQHSLV 61
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK-HGRLEEATRLFEQMPRR 172
+WN MI G R +A F A R+ +NA+I G +E+ LF ++P
Sbjct: 62 AWNAMIGGFAREGRFLEAKRLFDAAKVRDVVIWNALIHAKAAVTGGIEDVESLFSRIPCW 121
Query: 173 NVISYTAMLDGFMKKGEVDKARALSD-YMSFKNVVSWTVMITGYVK--NERFCEARELFY 229
+VIS+ ML + K G +++A+A D M ++V SW M + + ++ ++ F
Sbjct: 122 DVISWNEMLAAYTKHGSLNRAKAFFDTRMLQRDVFSWNTMAAAFARMVHQSGAAGKKFFE 181
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
RMP + N ++ G + G+ ++A+ LFE + +D VS M YA+NG E+A
Sbjct: 182 RMPQH--NTVSWNSIAQGLSENGLFDDAKSLFESMGDRDSVSMIQMAVTYARNGHPEQAQ 239
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE----ANVSVCNAV 345
LFS + V+V+ A L + R H+ F N C +
Sbjct: 240 ELFSRI--------SPRTVAVWNAL----LWSYARNGHLSETLATFHRIPMMNRITCTVI 287
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD--P 403
I MY CG ++D+ F + PN+ SWN ++AA+A +GH +AL+ +M +G P
Sbjct: 288 IEMYGECGSLIDARKVFDRTPDPNIFSWNIMLAAYAHNGHSNEALVLSQRMKDSGATVVP 347
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
D +T++ LL AC + G + E + V G+ + T +V++ + G + A +
Sbjct: 348 DRVTYVILLHACSNLGALREG-RMIHASVIASGMESNVVVATAIVNMYGKCGSMGDAKMV 406
Query: 464 TQGMPFEADTGVWGSLLAACVIN-LNVELGELAAK---KMRELDPQNSAVYVMLSNLYAA 519
MP + D W S+++A +N L +L A+ R L P +LS+ AA
Sbjct: 407 FDKMPAK-DVICWNSMISAYALNGLGKSALDLYARMRHSCRGLKPNRITFVSLLSSCSAA 465
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 134/318 (42%), Gaps = 30/318 (9%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
N P + L S + V V NA + + +R G +S F ++ + IT II Y
Sbjct: 232 NGHPEQAQELFSRISPRTVAVWNALLWSYARNGHLSETLATFHRIPMMNRITCTVIIEMY 291
Query: 92 WQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM--------PERNT 143
+ G L +++ +F P NI SWN M+A N ++A Q M P+R
Sbjct: 292 GECGSLIDARKVFDRTPDPNIFSWNIMLAAYAHNGHSNEALVLSQRMKDSGATVVPDR-- 349
Query: 144 ATYNAMIS-----GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD 198
TY ++ G L+ GR+ A+ + M NV+ TA+++ + K G + A+ + D
Sbjct: 350 VTYVILLHACSNLGALREGRMIHASVIASGM-ESNVVVATAIVNMYGKCGSMGDAKMVFD 408
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD----YDKNVFVVTAMITGFCKVGML 254
M K+V+ W MI+ Y N A +L+ RM N ++++ L
Sbjct: 409 KMPAKDVICWNSMISAYALNGLGKSALDLYARMRHSCRGLKPNRITFVSLLSSCSAANSL 468
Query: 255 ENARLLFERIQPKDC------VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
A F+ I DC ++ +I ++G EA L + M P +
Sbjct: 469 REAVFYFQ-IMIHDCDIQPGAEHYHFLIDLLGRSGKVAEAEELIN---SMPFAPGCGAWM 524
Query: 309 SVFTACSALQLLNEGRQS 326
S+ AC + GR++
Sbjct: 525 SLLAACERHSKVELGRRA 542
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 190/565 (33%), Positives = 297/565 (52%), Gaps = 58/565 (10%)
Query: 42 IRLFSTQYVFVNNAKISALSR----AGKISAARQLFDQM------TTKDVITWNAIITGY 91
I+L ++ + ++ +AL R A ISAAR+L + ++ N +I Y
Sbjct: 48 IQLLESRELELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMY 107
Query: 92 WQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNT-- 143
+ G L ++ LF+SMP +N+ +W +A N +A +F+ M P+R T
Sbjct: 108 GKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFS 167
Query: 144 ---ATYNAMISGFLKHGR-LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
A M + + GR + R+ +P NV+ TA++ + K G +D ARA +
Sbjct: 168 VILAAIAQMGAAAIDQGREIHRYARISGLLP--NVVVGTAVISMYGKCGRLDDARAAFEE 225
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
+ +KN V+W M+T Y + R EA EL
Sbjct: 226 LQWKNSVTWNAMMTNYKLDGRDREALEL-------------------------------- 253
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQ 318
F + D V +NAMIA YAQ+G ++AL L+ M D+ P T V+V C+ L
Sbjct: 254 -FREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELS 312
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L +GR H V F+AN+ V NA++ MY +CG + ++ F + + +SWNTII+
Sbjct: 313 ALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIIS 372
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
++A HGH ++AL+ + +M L G P +TF+ LLSAC H G V + +D F M + I
Sbjct: 373 SYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIK 432
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
PS H+ C++D+L R G+L +A + + MP +A+ W SLL AC + +++ G AA +
Sbjct: 433 PSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQ 492
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ + P S YV+LSN+YAAAG W+DV ++R +M +GV K SWIEIG+ VH F+
Sbjct: 493 VVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVS 552
Query: 559 GDMSHPCIDKIHLELKRASVQMKSV 583
GD SHP ++I++EL + +MK +
Sbjct: 553 GDSSHPQGEEIYVELGKMVEEMKGL 577
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 194/668 (29%), Positives = 316/668 (47%), Gaps = 153/668 (22%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT------GYWQN--------- 94
V +N ++ ++ G +S A +LFD+M +DV +WN +++ G W +
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146
Query: 95 ------------------------------GFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
G++ + LF + I N M+AG
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAK 206
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYT-- 178
ID A +YF+ M ER+ ++N MI+ + GR+ EA L +M R+ V +YT
Sbjct: 207 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 266
Query: 179 ---------------------------------AMLDGFMKKGEVDKARALSDYMSFKNV 205
A+++ + K G +A+ + + + +N
Sbjct: 267 LTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNS 326
Query: 206 VSWTVMITGYVKNERFCEARELFYRM---------------------------------- 231
VSWTV+I G ++ E F ++ ELF +M
Sbjct: 327 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 386
Query: 232 ---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS----------------- 271
+++ + V ++I+ + K G L+NA +F + +D VS
Sbjct: 387 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKA 446
Query: 272 --------------FNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSA 316
+NAM+ Y Q+G E+ L+++S M+ + D+ PD T V++F C+
Sbjct: 447 REFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCAD 506
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
+ G Q ++ G NVSV NA ITMYS+CG I +++ F ++ ++VSWN +
Sbjct: 507 IGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAM 566
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I ++QHG ++A F M G PD I+++++LS C H+G V E F++M +V+G
Sbjct: 567 ITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHG 626
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
I P EH++C+VD+L RAG L +A + MP + VWG+LL+AC I+ N EL ELAA
Sbjct: 627 ISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAA 686
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
K + ELD +S Y++L+ +Y+ AG D +VR LM+++G+ K YSW+E+ NKVH F
Sbjct: 687 KHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVF 746
Query: 557 LGGDMSHP 564
D+SHP
Sbjct: 747 KADDVSHP 754
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 204/455 (44%), Gaps = 66/455 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFD-QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
VF+ N + A G +S AR+L + +VIT N ++ GY + G L +++ LF MP
Sbjct: 55 VFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP 114
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA-----------------TYNAMIS 151
+++ SWN +++ D R ++ A+ R A A++
Sbjct: 115 RRDVASWNTLMS---DTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVD 171
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
F++ G ++ A+RLF Q+ R + +ML G+ K +D A + M+ ++VVSW +M
Sbjct: 172 MFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMM 231
Query: 212 ITGYVKNERFCEARELFYRM---------------------------------------P 232
I ++ R EA L M P
Sbjct: 232 IAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP 291
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
D +V +A+I + K G + A+ +F +Q ++ VS+ +I G Q +++ LF
Sbjct: 292 QIDP--YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELF 349
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ M M D L ++ + C L GRQ H L +++G + V N++I++Y++C
Sbjct: 350 NQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKC 409
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + ++E F + ++VSW ++I A++Q G+ KA FF M + IT+ ++L
Sbjct: 410 GDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAML 465
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
A G + + ++ M+ + P Y L
Sbjct: 466 GAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 500
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 180/393 (45%), Gaps = 41/393 (10%)
Query: 116 NCMIAGCIDNDRIDDAFDYFQA-MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
N ++ + + DA +A + E N T+N M++G+ K G L +A LF++MPRR+V
Sbjct: 59 NTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 118
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMS----------------FKNVVSW------TVMI 212
S+ ++ D +R +MS F W T ++
Sbjct: 119 ASWNTLMS--------DTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALV 170
Query: 213 TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+V+ A LF ++ +F +M+ G+ K+ +++A FE + +D VS+
Sbjct: 171 DMFVRCGYVDFASRLFSQIER--PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSW 228
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N MIA +Q+G EAL L M + ++ D T S TAC+ L L G+Q H VIR
Sbjct: 229 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 288
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+ + + V +A+I +Y++CG +++ F + N VSW +I Q+ + K++
Sbjct: 289 SLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVEL 348
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV---YGIIPSSEHYTCLVD 449
F+QM D +L+S C + + L L +K I+ S+ L+
Sbjct: 349 FNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS----LIS 404
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ ++ G L+ A + M E D W S++ A
Sbjct: 405 LYAKCGDLQNAEFVFSSMS-ERDIVSWTSMITA 436
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 182/543 (33%), Positives = 287/543 (52%), Gaps = 50/543 (9%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV NA+I Y + G +++++ +F SM ++ VSWN +++G + N+ DA +YF+ M
Sbjct: 282 DVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDM- 340
Query: 140 ERNTATYNAMIS-----------GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+N+A +S G L +G+ A + + I T ++D + K
Sbjct: 341 -QNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNT-LIDMYAKCC 398
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP----DYDK-------- 236
V + M K+++SWT +I GY +NE EA LF ++ D D
Sbjct: 399 CVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLR 458
Query: 237 ------------------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
++ + A++ + +VG + AR FE I+ KD VS+
Sbjct: 459 ACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSW 518
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
+MI NG+ EAL LF + + ++QPD ++S +A + L L +G++ H +IR
Sbjct: 519 TSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR 578
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
GF + ++++ MY+ CG + +S F + +L+ W ++I A HG +A+
Sbjct: 579 KGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIAL 638
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M PD ITFL+LL AC H+G + E FE+M Y + P EHY C+VD+LS
Sbjct: 639 FKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLS 698
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
R+ LE+A+Q + MP + + VW +LL AC I+ N ELGELAAK++ + D +NS Y +
Sbjct: 699 RSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYAL 758
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
+SN++AA G W DV VRL MK G+ K SWIE+ NK+H F+ D SHP D I+L+
Sbjct: 759 ISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLK 818
Query: 573 LKR 575
L +
Sbjct: 819 LAQ 821
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 214/455 (47%), Gaps = 27/455 (5%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFD--QMTTKDVITWNAIITGYWQNGFLQESKNLFQ 105
++VFV NA I+ + G + AR LFD M +D ++WN+II+ + G E+ +LF+
Sbjct: 178 EFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFR 237
Query: 106 SMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN----TATYNAMISGFLKHG 157
M N ++ + G D + A + N NA+I+ + K G
Sbjct: 238 RMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCG 297
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMK----KGEVDKARALSDYMSFKNVVSWTVMIT 213
R+E+A R+F M R+ +S+ +L G ++ + ++ R + + + VS +I
Sbjct: 298 RMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIA 357
Query: 214 GYVKNERFCEARELF-YRMPD-YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
++ +E+ Y + + D N+ + +I + K +++ FE + KD +S
Sbjct: 358 ASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLIS 417
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ +IAGYAQN EA+ LF + M D + SV ACS L+ N R+ H V
Sbjct: 418 WTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVF 477
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ A++ + NA++ +Y G + AF I S ++VSW ++I +G +AL
Sbjct: 478 KRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALE 536
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK----VYGIIPSSEHYTCL 447
F + PD I +S LSA + + + ++ +++ + G I SS L
Sbjct: 537 LFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASS-----L 591
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
VD+ + G +E + ++ + + D +W S++ A
Sbjct: 592 VDMYACCGTVENSRKMFHSVK-QRDLILWTSMINA 625
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 212/483 (43%), Gaps = 72/483 (14%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI 150
Y + G L+++ +F M + I +WN M+ + + + +A + ++ M A
Sbjct: 89 YEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTF 148
Query: 151 SGFLKH-GRLEEATRLFEQMPR--------RNVISYTAMLDGFMKKGEVDKARALSD--Y 199
LK G L E +RL ++ V A++ + K G++ AR L D
Sbjct: 149 PSVLKACGALGE-SRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIM 207
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRM---------------------PDYDK-- 236
M ++ VSW +I+ +V + EA LF RM P + K
Sbjct: 208 MEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG 267
Query: 237 --------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+V+V A+I + K G +E+A +F + +D VS+N +++G QN
Sbjct: 268 MGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQN 327
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
+ +AL F M +PD +++++ A L G++ H IRNG ++N+ +
Sbjct: 328 ELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIG 387
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
N +I MY++C + AF +H +L+SW TIIA +AQ+ + +A+ F ++ + G D
Sbjct: 388 NTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMD 447
Query: 403 PDGITFLSLLSACGHAGKVN---------ESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
D + S+L AC N DL ++M++ +V++
Sbjct: 448 VDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQ-----------NAIVNVYGE 496
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGEL-AAKKMRELDPQNSAVYV 511
G + A + + + D W S++ CV N L VE EL + K + P + A+
Sbjct: 497 VGHRDYARRAFESIR-SKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIIS 555
Query: 512 MLS 514
LS
Sbjct: 556 ALS 558
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 24/310 (7%)
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+ ++L R+ + F+ T ++ + K G L++A +F+ + + ++NAM+ + +
Sbjct: 64 QGQQLHARLLKSHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSS 123
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G EA+ L+ M + + D T SV AC AL G + H + ++ GF V VC
Sbjct: 124 GKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVC 183
Query: 343 NAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
NA+I MY +CG + + + F I + VSWN+II+A G +AL F +M G
Sbjct: 184 NALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVG 243
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT------CLVDILSRA 454
+ TF++ L E +L + ++G S H+ L+ + ++
Sbjct: 244 VASNTYTFVAALQGV-------EDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKC 296
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV---YV 511
G++E A ++ M D W +LL+ V N EL A R D QNSA V
Sbjct: 297 GRMEDAERVFASM-LCRDYVSWNTLLSGLVQN---ELYRDALNYFR--DMQNSAQKPDQV 350
Query: 512 MLSNLYAAAG 521
+ NL AA+G
Sbjct: 351 SVLNLIAASG 360
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 10/175 (5%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C A++ L +G+Q H ++++ A ++ ++ MY +CG + D+ F ++ + +W
Sbjct: 56 CVAVKALPQGQQLHARLLKSHLSAFLAT--KLLHMYEKCGSLKDAVKVFDEMTERTIFTW 113
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N ++ AF G Y +A+ + +M + G D TF S+L ACG G+ ++ + VK
Sbjct: 114 NAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVK 173
Query: 434 V-YGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEA-DTGVWGSLLAACV 484
+G + C L+ + + G L A + G+ E DT W S+++A V
Sbjct: 174 CGFGEFV----FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 303/545 (55%), Gaps = 38/545 (6%)
Query: 67 SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV----SWNCMIAGC 122
+ A ++FD+M ++++TW +IT + Q G +++ +LF M + V +++ +++ C
Sbjct: 2 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61
Query: 123 IDNDRIDDAFDYFQAMPERNTA-------TYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
+ + + A + M + G ++++ ++FEQMP NV+
Sbjct: 62 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 121
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF----YRM 231
S+TA++ + + GE DK + + + MI+G+++ F + L
Sbjct: 122 SWTAIITAYAQSGECDK----------EAIELFCKMISGHIRPNHFSFSSVLKACGNLSD 171
Query: 232 PDYDKNVF-------------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
P + V+ V ++I+ + + G +E+AR F+ + K+ VS+NA++ G
Sbjct: 172 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 231
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
YA+N +EEA LF+ + + T S+ + +++ + +G Q H +++ G+++N
Sbjct: 232 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 291
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+CNA+I+MYSRCG I + F ++ N++SW ++I FA+HG +AL F +M
Sbjct: 292 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 351
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
G P+ IT++++LSAC H G ++E F M K +GI+P EHY C+VD+L R+G L
Sbjct: 352 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLV 411
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+A + MP AD VW +LL AC ++ N ELG AA+ + E +P + A Y++LSNL+A
Sbjct: 412 EAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 471
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASV 578
+AG W+DV ++R MKE+ + K+ SWIE+ N+VH F G+ SHP +I+ EL + +
Sbjct: 472 SAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLAS 531
Query: 579 QMKSV 583
++K +
Sbjct: 532 KIKEM 536
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 181/344 (52%), Gaps = 23/344 (6%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFL-QESKNLFQSMPVKNI----VSWNCM 118
G + +R++F+QM +V++W AIIT Y Q+G +E+ LF M +I S++ +
Sbjct: 103 GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSV 162
Query: 119 IAGC---IDNDRIDDAFDYFQAMPERNT-ATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
+ C D + + Y + + N++IS + + GR+E+A + F+ + +N+
Sbjct: 163 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 222
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELFYR 230
+SY A++DG+ K + ++A L + ++ + ++ +++G + ++ R
Sbjct: 223 VSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGR 282
Query: 231 M--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+ Y N + A+I+ + + G +E A +F ++ ++ +S+ +MI G+A++G A A
Sbjct: 283 LLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRA 342
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVIT 347
L +F M++ +P++ T V+V +ACS + +++EG++ + + +G + ++
Sbjct: 343 LEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVD 402
Query: 348 MYSRCGGILDSELAFRQIHSPNLVS----WNTIIAAFAQHGHYE 387
+ R G +++ A I+S L++ W T++ A HG+ E
Sbjct: 403 LLGRSGLLVE---AMEFINSMPLMADALVWRTLLGACRVHGNTE 443
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 140/313 (44%), Gaps = 33/313 (10%)
Query: 18 PPILRILSTPDSCGNFT-PHSSNCL----IRLFSTQYVFVNNAKISALSRAGKISAARQL 72
P S +CGN + P++ + ++L V N+ IS +R+G++ AR+
Sbjct: 154 PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKA 213
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----------VSWNCMIAGC 122
FD + K+++++NAI+ GY +N +E+ LF + I +S I
Sbjct: 214 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 273
Query: 123 IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
++I + + N NA+IS + + G +E A ++F +M RNVIS+T+M+
Sbjct: 274 GKGEQIHGRL--LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 331
Query: 183 GFMKKGEVDKARALSDYM----SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV 238
GF K G +A + M + N +++ +++ E ++ F M K
Sbjct: 332 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY---KEH 388
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQ-----P--KDCVSFNAMIAGYAQNGVAEEALRL 291
+V M C V +L + LL E ++ P D + + ++ +G E L
Sbjct: 389 GIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTE--LGR 446
Query: 292 FSGMIKMDMQPDD 304
+ + ++ +PDD
Sbjct: 447 HAAEMILEQEPDD 459
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 190/633 (30%), Positives = 323/633 (51%), Gaps = 118/633 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV ++ I+ + G IS A+++FD T K+++ WNAI+ G+ QN +E+ +FQ M
Sbjct: 359 VFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRR 418
Query: 110 KNI----VSWNCMIAGCI--------------------DND---------------RIDD 130
++ ++ ++ CI D D ID
Sbjct: 419 ADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDV 478
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP-------------------- 170
A F +P +++ ++NA+I G + EA + ++M
Sbjct: 479 AKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSN 538
Query: 171 ---------------RRNVISYTA----MLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ NV S A ++D + K G+V+ +R + ++ ++V +
Sbjct: 539 IWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINAL 598
Query: 212 ITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITG---------------------- 247
ITG V+N R EA ELF ++ + + F T++++G
Sbjct: 599 ITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAI 658
Query: 248 --------------FCKVGMLENARLLFERI-QPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+ K +LE+A L E + K+ V + A I+GYAQNG + ++L +F
Sbjct: 659 LNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMF 718
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M D++ D+AT SV ACS + L +G++ H L++++GF + + +A++ MYS+C
Sbjct: 719 WRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKC 778
Query: 353 GGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G ++ S F+++ + N++ WN++I FA++G+ +AL+ F +M + PD +T L +
Sbjct: 779 GDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGV 838
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L AC HAG ++E + F+ M +VYGI+P +HY CL+D+L R G L+KA ++ +PF A
Sbjct: 839 LIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRA 898
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
D +W + LAAC ++ + E G++AAKK+ E++PQ+S+ YV LS+L+AAAG W + R
Sbjct: 899 DGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVARE 958
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
M+E+GV K SWI +GNK F+ D HP
Sbjct: 959 AMREKGVMKFPGCSWITVGNKQSVFVVQDTHHP 991
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 206/420 (49%), Gaps = 34/420 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
VF + ++ G++ AR++FD + D I W ++I GY + G Q++ LF M
Sbjct: 192 VFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEK 251
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
V + V+ +I+ R+ DA + + +T +NA+I+ + + G E L
Sbjct: 252 MGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGL 311
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
++ M ++ ++ + +F +++S +T F E R
Sbjct: 312 YKDMKKQGLMPTRS---------------------TFASILSAAANMTA------FDEGR 344
Query: 226 ELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
++ + D NVFV +++I + K G + +A+ +F+ K+ V +NA++ G+ QN
Sbjct: 345 QIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNE 404
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+ EE +++F M + D++ DD T VSV AC L L+ GRQ H + I+NG +A++ V N
Sbjct: 405 LQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVAN 464
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
A++ MYS+ G I ++ F I + VSWN +I A + +A+ +M G
Sbjct: 465 AMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIAL 524
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
D ++F + ++AC + + + +K Y + + + L+D+ S+ G +E + ++
Sbjct: 525 DEVSFATAINACSNIWAIETGKQIHSASIK-YNVCSNHAVGSSLIDLYSKFGDVESSRKV 583
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVSVFTACSALQLLNEGR 324
P + +++++ +A++G + L F + + PD + V +ACS L L GR
Sbjct: 118 PASSAAASSVLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGR 177
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H V+++GF ++V ++ MY++CG + D+ F I P+ + W ++IA + + G
Sbjct: 178 QVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVG 237
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
Y++AL FS+M G PD +T ++++S G++ ++ L +
Sbjct: 238 RYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLK 282
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 291/519 (56%), Gaps = 9/519 (1%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP---VKNIVSWNCM 118
R + A LFD + +++WN +I Y +N ++ LF + V + + C+
Sbjct: 61 RINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFVPDSFTLPCV 120
Query: 119 IAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
+ GC + + + + + ++++S + K G +E ++F++M ++V
Sbjct: 121 LKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDV 180
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
+S+ +++DG+ + GE++ A + + M K+ SWT++I G K+ + AR++F RMP
Sbjct: 181 VSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPI- 239
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+N AMI G+ K G A+ LF+++ + V++N+MI GY +N +AL+LF
Sbjct: 240 -RNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEV 298
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M++ D+ P+ T++ +A S + L GR H ++++GF+ + + +I MYS+CG
Sbjct: 299 MLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGS 358
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + FR I L W ++I HG E+ L F +M G P ITF+ +L+A
Sbjct: 359 VKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNA 418
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C HAG ++ F++M YGI PS EHY CL+D+L RAG LE+A + MP +A+
Sbjct: 419 CSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKV 478
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+W SLL+ + N+ +GE AA+ + +L P + YV+LSN+YAAAG+W V +VR +MK
Sbjct: 479 IWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMK 538
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
++G+ K S IE +H F+ GD SHP ++I+++L
Sbjct: 539 KKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKL 577
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 176/345 (51%), Gaps = 14/345 (4%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV ++ +S S+ G+I R++FD+M KDV++WN++I GY + G ++ + +F+ MP K
Sbjct: 150 FVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEK 209
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+ SW +I G + +++ A D F MP RN+ ++NAMI+G++K G A LF+QMP
Sbjct: 210 DSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMP 269
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK---------NERF 221
R+++++ +M+ G+ + + KA L + M +++ I G V R+
Sbjct: 270 ERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRW 329
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
+ + + + + T +I + K G +++A +F I K + ++I G
Sbjct: 330 VHS---YIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGM 386
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVS 340
+G+ E+ L LF M + ++P T + V ACS + R ++ G + ++
Sbjct: 387 HGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIE 446
Query: 341 VCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHG 384
+I + R G + +++ ++ N V W ++++ +HG
Sbjct: 447 HYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHG 491
>gi|297846216|ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336831|gb|EFH67248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 792
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 179/560 (31%), Positives = 301/560 (53%), Gaps = 53/560 (9%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N ++ L R G+ A+Q+FD M ++D ++WNA+I GY +NG ++E+K LF++M KN+V
Sbjct: 203 NTLVTGLIRNGETEKAKQVFDAMPSRDAVSWNAMIKGYIENGGMEEAKLLFENMSEKNVV 262
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR-- 171
+W M+ G + +A+ F MPERN ++ AMISGF + EA LF +M +
Sbjct: 263 TWTSMVYGYCRYGDVHEAYRLFCEMPERNVVSWTAMISGFAWNEFYREALMLFLEMKKDV 322
Query: 172 -------RNVISYT----AMLDGFMKKGEVDKARALSD------------------YMSF 202
+IS + GF + GE A+ +S+ Y SF
Sbjct: 323 DAISPNGETLISLAYACGGLGVGFRRLGEQLHAQVISNGWESVDHDGRLAKSLVHMYASF 382
Query: 203 K-------------NVVSWTVMITGYVKNERFCEARELFYRMPD-YDKNVFVVTAMITGF 248
++ S ++I+ Y+KN F A LF R+ +DK + T+MI G+
Sbjct: 383 GLIASAQSLLNESFDLQSCNIIISAYLKNGDFERAETLFRRVESLHDKVSW--TSMIDGY 440
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
G + A LF+++ KD V++ MI+G QN + EA L S M++ ++P ++T
Sbjct: 441 LDAGDVSRAFDLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYS 500
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNG--FEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+ ++ A L++G+ H ++ + ++ ++ + N++++MY++CG I D+ F ++
Sbjct: 501 VLLSSAGATSNLDQGKHLHCVIAKTTACYDPDLILQNSLVSMYAKCGAIDDAYEIFSKMV 560
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
++VSWN++I + HG +KAL F +M +G P+ +TFL +LSAC H+G + + ++
Sbjct: 561 RKDIVSWNSVIIGLSHHGLADKALKLFKEMLDSGMKPNSVTFLGVLSACSHSGLITKGLE 620
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LF+ M + Y I P EHY ++D+L RAG+L++A + +PF D V+G+LL C +N
Sbjct: 621 LFKAMKETYSIQPGVEHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLN 680
Query: 487 LN----VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
+ E AA ++ ELDP N+ +V L N+YA G +R M +GV K
Sbjct: 681 WRDRDAAGIAERAAMRLLELDPVNAPGHVALCNMYAGLGRHEMEKEMRKEMGIKGVKKTP 740
Query: 543 AYSWIEIGNKVHYFLGGDMS 562
SW+ + + + FL GD S
Sbjct: 741 GCSWVVVNGRANVFLSGDKS 760
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 223/433 (51%), Gaps = 52/433 (12%)
Query: 64 GKISAARQLFDQMTTKD----VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
G + AR L D++ + VI +++T Y + G+L E++ LF+ MP +NIV+ N M+
Sbjct: 86 GGLVHARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVMPERNIVTCNAML 145
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
G + R+++A+ F+ MP +N ++ M++ GR ++A LF++MP RNV+S+
Sbjct: 146 TGYVKCRRLNEAWTLFREMP-KNVVSWTVMLTALCDDGRSDDAVELFDEMPERNVVSWNT 204
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
++ G ++ GE +KA+ + D M ++ VSW MI GY++N EA+ LF M +KNV
Sbjct: 205 LVTGLIRNGETEKAKQVFDAMPSRDAVSWNAMIKGYIENGGMEEAKLLFENMS--EKNVV 262
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-M 298
T+M+ G+C+ G + A LF + ++ VS+ AMI+G+A N EAL LF M K +
Sbjct: 263 TWTSMVYGYCRYGDVHEAYRLFCEMPERNVVSWTAMISGFAWNEFYREALMLFLEMKKDV 322
Query: 299 D-MQPDDATLVSVFTACSALQL--LNEGRQSHVLVIRNGFEA------------------ 337
D + P+ TL+S+ AC L + G Q H VI NG+E+
Sbjct: 323 DAISPNGETLISLAYACGGLGVGFRRLGEQLHAQVISNGWESVDHDGRLAKSLVHMYASF 382
Query: 338 --------------NVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQ 382
++ CN +I+ Y + G +E FR++ S + VSW ++I +
Sbjct: 383 GLIASAQSLLNESFDLQSCNIIISAYLKNGDFERAETLFRRVESLHDKVSWTSMIDGYLD 442
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G +A F ++ D DG+T+ ++S E+ L MV+ G+ P +
Sbjct: 443 AGDVSRAFDLFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC-GLKPLNS 497
Query: 443 HYTCLVDILSRAG 455
Y+ L LS AG
Sbjct: 498 TYSVL---LSSAG 507
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY----TAMLDGFMKKGEVDKARAL 196
R + A+I L G L A L +++P+R IS T++L + K G +D+AR L
Sbjct: 70 RGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVL 129
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+ M +N+V+ M+TGYVK R EA LF MP KNV T M+T C G ++
Sbjct: 130 FEVMPERNIVTCNAMLTGYVKCRRLNEAWTLFREMP---KNVVSWTVMLTALCDDGRSDD 186
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A LF+ + ++ VS+N ++ G +NG E+A ++F M D +A +
Sbjct: 187 AVELFDEMPERNVVSWNTLVTGLIRNGETEKAKQVFDAMPSRDAVSWNAMIKGYIE---- 242
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
N G + L+ N E NV +++ Y R G + ++ F ++ N+VSW +
Sbjct: 243 ----NGGMEEAKLLFENMSEKNVVTWTSMVYGYCRYGDVHEAYRLFCEMPERNVVSWTAM 298
Query: 377 IAAFAQHGHYEKALIFFSQM--GLNGFDPDGITFLSLLSACGHAG 419
I+ FA + Y +AL+ F +M ++ P+G T +SL ACG G
Sbjct: 299 ISGFAWNEFYREALMLFLEMKKDVDAISPNGETLISLAYACGGLG 343
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 39 NCLIRLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
+C+I + Y + + N+ +S ++ G I A ++F +M KD+++WN++I G +G
Sbjct: 519 HCVIAKTTACYDPDLILQNSLVSMYAKCGAIDDAYEIFSKMVRKDIVSWNSVIIGLSHHG 578
Query: 96 FLQESKNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATY 146
++ LF+ M N V++ +++ C + I + F+AM E Y
Sbjct: 579 LADKALKLFKEMLDSGMKPNSVTFLGVLSACSHSGLITKGLELFKAMKETYSIQPGVEHY 638
Query: 147 NAMISGFLKHGRLEEATRLFEQMP 170
+MI + G+L+EA +P
Sbjct: 639 ISMIDLLGRAGKLKEAEEFISALP 662
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 23/241 (9%)
Query: 317 LQLLNEG---RQSHVL--VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
L+ L+EG H+L + + G + V C +++T Y++ G + ++ + F + N+V
Sbjct: 80 LRRLSEGGLVHARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVMPERNIV 139
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ N ++ + + +A F +M N +++ +L+A G+ +++++LF+ M
Sbjct: 140 TCNAMLTGYVKCRRLNEAWTLFREMPKNV-----VSWTVMLTALCDDGRSDDAVELFDEM 194
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
+ + + LV L R G+ EKA Q+ MP D W +++ + N +E
Sbjct: 195 PERNVV-----SWNTLVTGLIRNGETEKAKQVFDAMP-SRDAVSWNAMIKGYIENGGMEE 248
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA----YSWI 547
+L + M E +N + + Y G + R+ M E+ V A ++W
Sbjct: 249 AKLLFENMSE---KNVVTWTSMVYGYCRYGDVHEAYRLFCEMPERNVVSWTAMISGFAWN 305
Query: 548 E 548
E
Sbjct: 306 E 306
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 191/582 (32%), Positives = 312/582 (53%), Gaps = 20/582 (3%)
Query: 17 FPPILRILS-TPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FP +LR PD H+ ++R V V NA ++ ++ G I AAR++FD
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAH--VLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDG 257
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN-----DRIDD 130
M D I+WNA+I G+++N + LF +M ++N V N M + +
Sbjct: 258 MAVTDCISWNAMIAGHFENHECEAGLELFLTM-LENEVQPNLMTITSVTVASGMLSEVGF 316
Query: 131 AFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
A + +R + A N++I + GR+ +A ++F +M ++ +S+TAM+ G+ K
Sbjct: 317 AKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEK 376
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN------VFV 240
G DKA + M NV V I + ++ ++ + +N V V
Sbjct: 377 NGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVV 436
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
A++ + K ++ A +F+ + KD VS+++MIAG+ N + EAL F M+ +
Sbjct: 437 ANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG-HV 495
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+P+ T ++ +AC+A L G++ H V+R G + V NA++ +Y +CG +
Sbjct: 496 KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 555
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++VSWN +++ F HG + AL F+QM G PD +TF++LL AC AG
Sbjct: 556 QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGM 615
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
V + +LF +M + + I+P+ +HY C+VD+LSR G+L +A+ + MP + D VWG+LL
Sbjct: 616 VIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALL 675
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
C I+ +VELGELAAK + EL+P + A +V+L +LY AG W V RVR M+E+G+ +
Sbjct: 676 NGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQ 735
Query: 541 QCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
SW+E+ H FL D SHP I +I++ L +MK+
Sbjct: 736 DNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKA 777
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 184/350 (52%), Gaps = 16/350 (4%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL---------- 196
NAM+S ++ G + A R+F +MP R+V S+ M+ G+ K G +++A L
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
D +F V+ I + + R A L + D V V+ A++T + K G +
Sbjct: 195 PDVYTFPCVLRTCGGIPDW-RMGREVHAHVLRFGFGD---EVDVLNALVTMYAKCGDIVA 250
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR +F+ + DC+S+NAMIAG+ +N E L LF M++ ++QP+ T+ SV A
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L + ++ H ++ GF +V+ CN++I MY+ G + D+ F ++ + + +SW +
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I+ + ++G +KAL ++ M L+ PD +T S L+AC G+++ + L EL + G
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHEL-AQNKG 429
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
I L+++ +++ ++KA ++ + M E D W S++A N
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFN 478
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 211/468 (45%), Gaps = 96/468 (20%)
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM----PR 171
N M++ + I A+ F MPER+ ++N M+ G+ K G LEEA L+ +M R
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 172 RNVISY-----------------------------------TAMLDGFMKKGEVDKARAL 196
+V ++ A++ + K G++ AR +
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEAR-ELFYRMPDYD--------KNVFVVTAMIT- 246
D M+ + +SW MI G+ +N CEA ELF M + + +V V + M++
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHE-CEAGLELFLTMLENEVQPNLMTITSVTVASGMLSE 313
Query: 247 -GFCK---------------------------VGMLENARLLFERIQPKDCVSFNAMIAG 278
GF K +G + +A +F R++ KD +S+ AMI+G
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
Y +NG ++AL +++ M ++ PDD T+ S AC+ L L+ G + H L GF
Sbjct: 374 YEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V V NA++ MY++ I + F+ + ++VSW+++IA F + +AL +F M L
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-L 492
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT--CLVDILSRAGQ 456
P+ +TF++ LSAC G + ++ +++ GI SE Y L+D+ + GQ
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRC-GI--GSEGYVPNALLDLYVKCGQ 549
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACV-----------INLNVELGE 493
AW + E D W +L+ V N VE+GE
Sbjct: 550 TSYAWA-QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE 596
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 309/551 (56%), Gaps = 34/551 (6%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG-FL 97
+C+++ VFV NA IS SR G + AR++F++M T+D+++WNA+I+GY Q G +
Sbjct: 188 SCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYG 247
Query: 98 QESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAM 149
E+ ++F M + +S+ ++ C ++ A + E++ A N +
Sbjct: 248 LEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVL 307
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS------FK 203
IS + K +E+A +F+ M RNV+S+T M+ +D+A A+S + +
Sbjct: 308 ISTYFKCQVIEDARLVFQNMNERNVVSWTTMIS-------IDEAEAVSFFNEMRLDGVYP 360
Query: 204 NVVSWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
N V++ +I E + + + F + V ++IT + K ++++ +F
Sbjct: 361 NDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVF 420
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALR-LFSGMIKMDMQPDDATLVSVFTACSALQ-- 318
+ ++ +D +++NA+I+G+ NG+ +EA+R FSG+I + +P+ + S+ A A +
Sbjct: 421 QELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLI--ESKPNQYSFGSILNAIGAAEDV 478
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L G++ H +I+ G + V +A++ MY++ G I +S+ F + + +W TII+
Sbjct: 479 SLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIIS 538
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
A+A+HG YE + +F +M PD ITFLS+L+ACG G V+ LF MVK Y I
Sbjct: 539 AYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIE 598
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
PS+EHY+CLVD+L RAG+LE+A ++ +P V SLL AC ++ NV++GE A
Sbjct: 599 PSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRVHGNVDMGERVADA 658
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN-----KV 553
+ E++P S YV++SNLYA G W V +VR M+ +GV K+ +SW+++G +
Sbjct: 659 LMEMEPTESGSYVLMSNLYAEIGKWEMVAKVRKRMRVKGVKKEVGFSWVDVGGIDSSLSL 718
Query: 554 HYFLGGDMSHP 564
H F GD SHP
Sbjct: 719 HGFSSGDTSHP 729
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 194/396 (48%), Gaps = 71/396 (17%)
Query: 82 ITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE- 140
I N+++ Y ++G ++ +F+++ +IVSWN +++GC + +DAF + M
Sbjct: 100 IVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGCQTS---EDAFSFACKMNSS 156
Query: 141 -----------------RNTATY-----------------------NAMISGFLKHGRLE 160
R+ Y NA+IS + + G L
Sbjct: 157 GVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLV 216
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS------------DYMSFKNVVSW 208
EA R+FE+M R+++S+ AM+ G+ ++G + A+S D +SF + VS
Sbjct: 217 EARRVFEEMKTRDLVSWNAMISGYSQEG-IYGLEAISMFLQMFRGGMELDRISFTSAVS- 274
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
GY KN ++K+V V +I+ + K ++E+ARL+F+ + ++
Sbjct: 275 ---ACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERN 331
Query: 269 CVSFNAMIAGYAQNGVAE-EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
VS+ MI+ + E EA+ F+ M + P+D T V + A + +L+ +G+ H
Sbjct: 332 VVSWTTMIS------IDEAEAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVH 385
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ GF + +VCN++ITMY++ + DS F+++ ++++WN +I+ F +G +
Sbjct: 386 GFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQ 445
Query: 388 KAL-IFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+A+ FFS GL P+ +F S+L+A G A V+
Sbjct: 446 EAIRAFFS--GLIESKPNQYSFGSILNAIGAAEDVS 479
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 36/282 (12%)
Query: 186 KKGEVDKARALSDYMSFKNVVSWTV---MITGYVKN-ERFCEAREL-------------- 227
K GE A L D +N+ + +++G++ N + F A L
Sbjct: 28 KTGESSHAHNLLDKTPHRNLSFQIIKEHLLSGFINNIDEFTVANALKACRGYPLLGSQIH 87
Query: 228 -FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
F + ++ V +++ +CK G A +FE + D VS+N +++G +E
Sbjct: 88 GFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGCQ---TSE 144
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTAC----SALQLLNEGRQSHVLVIRNGFEANVSVC 342
+A M + D T +V + C A L+ G Q H +++ GF+ V V
Sbjct: 145 DAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLI--GLQLHSCIVKFGFDCEVFVG 202
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE-KALIFFSQMGLNGF 401
NA+I+MYSR G ++++ F ++ + +LVSWN +I+ ++Q G Y +A+ F QM G
Sbjct: 203 NALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGM 262
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
+ D I+F S +SACG+ + EL +++G+ + H
Sbjct: 263 ELDRISFTSAVSACGYEKNL-------ELARQIHGLSIKTRH 297
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 293/546 (53%), Gaps = 34/546 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+ +TQ F+ N ISA S I+ A F + +V+ +NA+I G + +++
Sbjct: 1 MIKTNTTQDCFLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQA 60
Query: 101 KNLFQSMPVKNIV----SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH 156
+ M N++ S++ +I C +D AF A+ KH
Sbjct: 61 LVHYMHMLRNNVMPTSYSFSSLIKAC--TLLVDSAFG-------------EAVHGHVWKH 105
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
G F+ +V T +++ + G+V +R + D M ++V +WT MI+ +V
Sbjct: 106 G--------FDS----HVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTMISAHV 153
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
++ A LF MP+ KNV AMI G+ K+G E+A LF ++ +D +S+ M+
Sbjct: 154 RDGDMASAGRLFDEMPE--KNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMM 211
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
Y++N +E + LF +I M PD+ T+ +V +AC+ L L G++ H+ ++ GF+
Sbjct: 212 NCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFD 271
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+V + +++I MY++CG I + L F ++ + NL WN II A HG+ E+AL F +M
Sbjct: 272 LDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEM 331
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
P+ +TF+S+L+AC HAG + E F MV+ Y I P EHY C+VD+LS+AG
Sbjct: 332 ERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGL 391
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
LE A ++ + M E ++ +WG+LL C ++ N+E+ +A + + L+P NS Y +L N+
Sbjct: 392 LEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVNM 451
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQC-AYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
YA W +V ++R MK+ GV K+C SW+EI VH F D HP ++HL L
Sbjct: 452 YAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKTVHLFAASDTYHPSYSQLHLLLAE 511
Query: 576 ASVQMK 581
Q++
Sbjct: 512 LDDQLR 517
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 281/538 (52%), Gaps = 43/538 (7%)
Query: 87 IITGYWQNGFLQESKNLFQSMPV--KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE---- 140
+++ Y + G + E++ +F+ MP+ +++V+WN M+ NDR +AF M +
Sbjct: 479 LVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVL 538
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
+ ++ +++S + + R+ TA++ + E+++AR++ D M
Sbjct: 539 PDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFDEM 598
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRM------PD--------------------- 233
+VVSWT M++ +N F E LF RM PD
Sbjct: 599 DHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGK 658
Query: 234 ----------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
+ ++ V A++ + G A FE ++ +D VS+N M A YAQ G
Sbjct: 659 IIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAG 718
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+A+EA+ LF M ++PD T + L+++G+ H L +G +++VSV
Sbjct: 719 LAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVAT 778
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
++ +Y++CG + ++ FR +V N II A AQHG E+A+ F +M G P
Sbjct: 779 GLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRP 838
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
D T +S++SACGHAG V E F M + +GI P+ EHY C VD+L RAGQLE A QI
Sbjct: 839 DVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQI 898
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW 523
+ MPFE +T VW SLL C + + ELGE A+++ ELDP NSA +V+LSN+Y A G W
Sbjct: 899 IRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKW 958
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+D R + +Q V SW+EIG +VH F+ GD SHP D+I++ L + + M+
Sbjct: 959 KDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMR 1016
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 214/452 (47%), Gaps = 40/452 (8%)
Query: 43 RLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQ 98
R++ + Y V V NA IS ++ G SAA +F ++ K DVI+WN ++
Sbjct: 360 RIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFG 419
Query: 99 ESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAM 149
+ N F M + I VS+ ++ C +++ +D + R ++ +
Sbjct: 420 KVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATML 479
Query: 150 ISGFLKHGRLEEATRLFEQMP--RRNVISYTAMLDGFMKKG----------EVDKARALS 197
+S + K G + EA +F++MP R+++++ ML + + E+ + L
Sbjct: 480 VSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLP 539
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD---KNVFVVTAMITGFCKVGML 254
D +SF +V+S +C RM + ++ + TA+I+ + L
Sbjct: 540 DALSFTSVLS-----------SCYCSQEAQVLRMCILESGYRSACLETALISMHGRCREL 588
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E AR +F+ + D VS+ AM++ A+N +E LF M + PD TL + C
Sbjct: 589 EQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTC 648
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
L G+ H V G EA+++V NA++ MYS CG ++ F + + +LVSWN
Sbjct: 649 LDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWN 708
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+ AA+AQ G ++A++ F M L G PD +TF + L+ G + V++ LF +
Sbjct: 709 IMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDG-KLFHGLAAE 767
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
G+ T LV + ++ G+L++A + +G
Sbjct: 768 SGLDSDVSVATGLVKLYAKCGKLDEAISLFRG 799
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 220/460 (47%), Gaps = 27/460 (5%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q++F+ N I+ R G + A +F +M ++V++W A+I+ Q+G + LF++M
Sbjct: 58 QHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTM 117
Query: 108 PVKNIVSWN-----CMIAGCIDNDRIDDAFDYFQAM-------PERNTATY--NAMISGF 153
+++ + N M+ C N R AM E TAT NAMI+ +
Sbjct: 118 LLESSAAPNSYTLVAMLNACA-NSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMY 176
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV--DKARALSDYM---SFKNVVSW 208
K G E+A +F +P ++V+S+TAM + ++ D R + + NV+++
Sbjct: 177 AKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITF 236
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI---Q 265
+ G + R + A+I + K G E A +F+ + Q
Sbjct: 237 ITAL-GACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQ 295
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL-LNEGR 324
D VS+NAMI+ + G +A+ +F + M+P+ TL+++ A +A + R
Sbjct: 296 ELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAAR 355
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQH 383
+ H + +G+ +V V NA+I+MY++CG + FR+I +++SWNT++ A
Sbjct: 356 KFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDR 415
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
+ K + F M L G DP+ ++F+++L+AC ++ ++ + L++ S
Sbjct: 416 KSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSV 475
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGV-WGSLLAA 482
T LV + + G + +A + + MP + + V W +L A
Sbjct: 476 ATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGA 515
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 216/464 (46%), Gaps = 32/464 (6%)
Query: 46 STQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQN-GFLQESKNLF 104
ST V NA I+ ++ G A +F + KDV++W A+ Y Q F ++ +F
Sbjct: 162 STTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIF 221
Query: 105 QSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKH 156
+ M ++ N++++ + C + D + E NA+I+ + K
Sbjct: 222 REMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEAGLGFDPLAGNALINMYGKC 278
Query: 157 GRLEEATRLFEQMPRR---NVISYTAMLDGFMKKGEVDKARAL-----SDYMSFKNVVSW 208
G E A +F+ M R +++S+ AM+ ++ G A A+ + M +V
Sbjct: 279 GDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLI 338
Query: 209 TVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
T++ F AR+ R+ Y ++V V A+I+ + K G A +F RI+
Sbjct: 339 TILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRW 398
Query: 267 K-DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
K D +S+N M+ + + F M+ + P+ + +++ ACS + L+ GR+
Sbjct: 399 KCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRK 458
Query: 326 SHVLVI-RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP--NLVSWNTIIAAFAQ 382
H L++ R SV +++MY +CG I ++EL F+++ P +LV+WN ++ A+AQ
Sbjct: 459 IHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQ 518
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+ ++A +M G PD ++F S+LS+C ++ + + + G S+
Sbjct: 519 NDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC----YCSQEAQVLRMCILESG-YRSAC 573
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
T L+ + R +LE+A + M D W ++++A N
Sbjct: 574 LETALISMHGRCRELEQARSVFDEMD-HGDVVSWTAMVSATAEN 616
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 179/391 (45%), Gaps = 22/391 (5%)
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLF 166
++ + ++ C+D++ + + + E++ N +I+ +++ G LEEA +F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK-----NVVSWTVMITGYVKNERF 221
+M RNV+S+TA++ + G +A AL M + N + M+ +
Sbjct: 84 SKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 222 CEARELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
R + + + V AMI + K G E+A +F I KD VS+ AM
Sbjct: 144 AIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAM 203
Query: 276 IAGYAQNG-VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
YAQ +ALR+F M+ + P+ T ++ AC++L+ +G H L+ G
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLR---DGTWLHSLLHEAG 260
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSP---NLVSWNTIIAAFAQHGHYEKALI 391
+ NA+I MY +CG + F+ + S +LVSWN +I+A + G + A+
Sbjct: 261 LGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMA 320
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F ++ L G P+ +T +++L+A +G + F + G + ++ +
Sbjct: 321 IFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMY 380
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ G AW + + + ++ D W ++L A
Sbjct: 381 AKCGFFSAAWTVFRRIRWKCDVISWNTMLGA 411
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 8/252 (3%)
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
SG +++D D ++ +C L +G+++H L+ G E ++ + N +I MY R
Sbjct: 13 LSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVR 72
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL-NGFDPDGITFLS 410
CG + ++ F ++ N+VSW +I+A AQ G + +A F M L + P+ T ++
Sbjct: 73 CGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVA 132
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT----CLVDILSRAGQLEKAWQITQG 466
+L+AC ++ + + M+ G+ S T ++++ ++ G E A +
Sbjct: 133 MLNACANSRDLAIGRSI-HAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLT 191
Query: 467 MPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
+P E D W ++ A L + L P V ++ L A + RD
Sbjct: 192 IP-EKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL-RDG 249
Query: 527 TRVRLLMKEQGV 538
T + L+ E G+
Sbjct: 250 TWLHSLLHEAGL 261
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 116/291 (39%), Gaps = 59/291 (20%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRAGKISAAR 70
+ P + +T D+C + T +I T+ + V NA ++ S G A
Sbjct: 634 VIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREAL 693
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVSWNCMIAG--- 121
F+ M +D+++WN + Y Q G +E+ LF+ M P K S ++G
Sbjct: 694 SFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSA 753
Query: 122 ---------------CIDND---------------RIDDAFDYFQAMPERNTATYNAMIS 151
+D+D ++D+A F+ + NA+I
Sbjct: 754 LVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIG 813
Query: 152 GFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
+HG EEA ++F +M R +V + +++ G V++ S +++ K
Sbjct: 814 ALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEE--GCSSFLTMKEYFG 871
Query: 208 WTVMITGYV-------KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
+ + Y + + A ++ +MP ++ N V T+++ G CK+
Sbjct: 872 ISPTLEHYACFVDLLGRAGQLEHAEQIIRKMP-FEDNTLVWTSLL-GTCKL 920
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 177/495 (35%), Positives = 268/495 (54%), Gaps = 14/495 (2%)
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA-FDYFQAMPER---NTATYNAMISG 152
+ S +F + N+ WNCMI CI+N+ A Y++ M N TY A++
Sbjct: 87 FESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKA 146
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE-----VDKARALSDYMSFKNVVS 207
G + E ++ + + + +L ++ V+ R L D + V
Sbjct: 147 CSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVC 206
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
W MI GY++ ARELF MPD + AMI+GF + GM+E AR F+ ++ +
Sbjct: 207 WNAMIDGYLRFGEVEAARELFEGMPDRSM-ISTWNAMISGFSRCGMVEVAREFFDEMKER 265
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D +S++AMI GY Q G EAL +F M K ++P L SV +AC+ L L++GR H
Sbjct: 266 DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIH 325
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
RN + + + +++ MY++CG I + F ++ + + SWN +I A HG E
Sbjct: 326 TYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAE 385
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
A+ FS+M +N P+ ITF+ +L+AC H G V + + +F M K YG+ P EHY C+
Sbjct: 386 DAIDLFSKMDIN---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCI 442
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
VD+L RAG L +A ++ +P E VWG+LL AC + NVELGE K + EL+PQNS
Sbjct: 443 VDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNS 502
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG-NKVHYFLGGDMSHPCI 566
Y +LSN+YA AG W +V VR LMKE+G+ S I++G +VH F+ GD SHP +
Sbjct: 503 GRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQV 562
Query: 567 DKIHLELKRASVQMK 581
I+ L + +++
Sbjct: 563 KDIYQMLDKVKERLQ 577
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 159/343 (46%), Gaps = 62/343 (18%)
Query: 64 GKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS-WNCMIAG 121
G++ AR++ D + D + WNA+I GY + G ++ ++ LF+ MP ++++S WN MI+G
Sbjct: 186 GRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISG 245
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRRNVI 175
++ A ++F M ER+ +++AMI G+++ G EA +F QM PR+ V+
Sbjct: 246 FSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVL 305
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELFYRM 231
++L G +D+ R + Y ++ V T ++ Y K R A E+F +M
Sbjct: 306 P--SVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKM 363
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
+K V AMI G A +G AE+A+ L
Sbjct: 364 S--NKEVSSWNAMIGGL-------------------------------AMHGRAEDAIDL 390
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN------GFEANVSVCNAV 345
FS KMD+ P++ T V V AC+ L+ +G L I N G E + +
Sbjct: 391 FS---KMDINPNEITFVGVLNACAHGGLVQKG-----LTIFNSMRKEYGVEPQIEHYGCI 442
Query: 346 ITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYE 387
+ + R G + ++E I + P W ++ A +HG+ E
Sbjct: 443 VDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVE 485
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 20/276 (7%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVI-TWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
NA I R G++ AAR+LF+ M + +I TWNA+I+G+ + G ++ ++ F M ++
Sbjct: 208 NAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDE 267
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN----AMISGFLKHGRLEEATRLFEQ 168
+SW+ MI G I +A + F M + +++S G L++ R
Sbjct: 268 ISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG-RWIHT 326
Query: 169 MPRRNVISY-----TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+RN I T+++D + K G +D A + + MS K V SW MI G + R +
Sbjct: 327 YAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAED 386
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----FNAMIAG 278
A +LF +M D + N ++ G+++ +F ++ + V + ++
Sbjct: 387 AIDLFSKM-DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDL 445
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ G+ EA ++ S + +P A ++ AC
Sbjct: 446 LGRAGLLTEAEKVVS---SIPTEPTPAVWGALLGAC 478
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 51/283 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI- 112
NA IS SR G + AR+ FD+M +D I+W+A+I GY Q G E+ +F M + I
Sbjct: 240 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 299
Query: 113 --------VSWNCMIAGCIDN------------------------------DRIDDAFDY 134
V C G +D RID A++
Sbjct: 300 PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEV 359
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKA 193
F+ M + +++NAMI G HGR E+A LF +M N I++ +L+ G V K
Sbjct: 360 FEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKG 419
Query: 194 RALSDYMSFKNVVSWTVMITGYV-----KNERFCEARELFYRMPDYDKNVFVVTAMITGF 248
+ + M + V + G + + EA ++ +P + V + G
Sbjct: 420 LTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP--TEPTPAVWGALLGA 477
Query: 249 CK----VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
C+ V + E + ++P++ + + YA+ G EE
Sbjct: 478 CRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEE 520
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYS-----RCGGILDSELAFRQIHSPNLVSWN 374
L+ +Q+H L++R G + + +++ Y+ R S F + PN+ WN
Sbjct: 47 LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 106
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I ++ KA++ + +M + F P+ T+ ++L AC AG V E + + +VK
Sbjct: 107 CMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVK- 165
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
+G+ + + + + G+L +A +I E D W ++ I+ + GE+
Sbjct: 166 HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAM-----IDGYLRFGEV 220
Query: 495 -AAKKMRELDPQNSAV 509
AA+++ E P S +
Sbjct: 221 EAARELFEGMPDRSMI 236
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 192/649 (29%), Positives = 305/649 (46%), Gaps = 120/649 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N S+ + AA +FD+M ++V +W +I G ++G + F M I+
Sbjct: 159 NHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGIL 218
Query: 114 ----SWNCMIAGCIDND-----------------------------------RIDDAFDY 134
+++ +I CI D I+D++
Sbjct: 219 PDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWV 278
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP------------------------ 170
F M E N ++NAMISG +G EA LF +M
Sbjct: 279 FNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDV 338
Query: 171 ---------------RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV---VSWTVMI 212
NV+ TA++D + K G + AR++ D +F N W MI
Sbjct: 339 NMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFD-TNFINCGVNTPWNAMI 397
Query: 213 TGYVKNERFCEARELFYRMPDYDKN----------------------------------- 237
+GY ++ EA EL+ +M
Sbjct: 398 SGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLD 457
Query: 238 ---VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
V V A+ + K G LE+ R +F+R++ +D VS+ ++ Y+Q+ + EEAL F
Sbjct: 458 LMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCL 517
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + P+ T SV +C++L L GRQ H L+ + G + + +A+I MY++CG
Sbjct: 518 MREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGS 577
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I ++ F +I +P++VSW II+ +AQHG E AL F +M L+G + +T L +L A
Sbjct: 578 ITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFA 637
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V E + F+ M YG++P EHY C++D+L R G+L+ A + + MP E +
Sbjct: 638 CSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEM 697
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VW +LL C ++ NVELGE+AA+K+ + P+ SA YV+LSN Y G + D +R +MK
Sbjct: 698 VWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMK 757
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+QGV K+ YSWI + +VH F GD HP +I+++L+ ++K++
Sbjct: 758 DQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAM 806
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 41/361 (11%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML----------DGFMKKGEVDKARA 195
+N + K A +F++MP+RNV S+T M+ DGF E+ +
Sbjct: 158 FNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGI 217
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
L D ++ ++ + + ++ + A+ + M + ++FV T+++ + K+G +E
Sbjct: 218 LPDKFAYSAIIQSCIGLDS-LELGKMVHAQIV---MRGFATHIFVSTSLLNMYAKLGSIE 273
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
++ +F + + VS+NAMI+G NG+ EA LF M P+ TLVSV A
Sbjct: 274 DSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVG 333
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS--- 372
L +N G++ G E NV V A+I MYS+CG + D+ R + N ++
Sbjct: 334 KLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDA----RSVFDTNFINCGV 389
Query: 373 ---WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA-----GKVNES 424
WN +I+ ++Q G ++AL + QM NG D T+ S+ +A + G+V
Sbjct: 390 NTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHG 449
Query: 425 MDL---FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
M L +LMV + D S+ G LE ++ M E D W +L+
Sbjct: 450 MVLKCGLDLMVVSVN--------NAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVT 500
Query: 482 A 482
A
Sbjct: 501 A 501
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 176/420 (41%), Gaps = 76/420 (18%)
Query: 18 PPILRILSTPDSCG-----NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQL 72
P + ++S + G N NC L V V A I S+ G + AR +
Sbjct: 320 PNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSV 379
Query: 73 FDQ--MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDD 130
FD + WNA+I+GY Q+G QE+ L+ M I S D
Sbjct: 380 FDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS---------------D 424
Query: 131 AFDYFQAMPERNTATYNAM-ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
+ Y + +NA+ S L+ GR+ L + V A+ D + K G
Sbjct: 425 LYTY--------CSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGF 476
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNE-------RFCEARELFYR------------ 230
++ R + D M +++VSWT ++T Y ++ FC RE +
Sbjct: 477 LEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLIS 536
Query: 231 -----MPDYDKNVF-------------VVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+Y + V + +A+I + K G + A +F++I D VS+
Sbjct: 537 CASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSW 596
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
A+I+GYAQ+G+ E+AL+LF M ++ + TL+ V ACS ++ EG + +
Sbjct: 597 TAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGL-FYFQQME 655
Query: 333 NGF----EANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYE 387
+G+ E C +I + R G + D+ R++ PN + W T++ HG+ E
Sbjct: 656 DGYGVVPEMEHYAC--IIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE 713
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 191/582 (32%), Positives = 312/582 (53%), Gaps = 20/582 (3%)
Query: 17 FPPILRILS-TPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FP +LR PD H+ ++R V V NA ++ ++ G I AAR++FD
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAH--VLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDG 257
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN-----DRIDD 130
M D I+WNA+I G+++N + LF +M ++N V N M + +
Sbjct: 258 MAVTDCISWNAMIAGHFENHECEAGLELFLTM-LENEVQPNLMTITSVTVASGMLSEVGF 316
Query: 131 AFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
A + +R + A N++I + GR+ +A ++F +M ++ +S+TAM+ G+ K
Sbjct: 317 AKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEK 376
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN------VFV 240
G DKA + M NV V I + ++ ++ + +N V V
Sbjct: 377 NGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVV 436
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
A++ + K ++ A +F+ + KD VS+++MIAG+ N + EAL F M+ +
Sbjct: 437 ANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG-HV 495
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+P+ T ++ +AC+A L G++ H V+R G + V NA++ +Y +CG +
Sbjct: 496 KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 555
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++VSWN +++ F HG + AL F+QM G PD +TF++LL AC AG
Sbjct: 556 QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGM 615
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
V + +LF +M + + I+P+ +HY C+VD+LSR G+L +A+ + MP + D VWG+LL
Sbjct: 616 VIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALL 675
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
C I+ +VELGELAAK + EL+P + A +V+L +LY AG W V RVR M+E+G+ +
Sbjct: 676 NGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQ 735
Query: 541 QCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
SW+E+ H FL D SHP I +I++ L +MK+
Sbjct: 736 DNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKA 777
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 184/350 (52%), Gaps = 16/350 (4%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL---------- 196
NAM+S ++ G + A R+F +MP R+V S+ M+ G+ K G +++A L
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
D +F V+ I + + R A L + D V V+ A++T + K G +
Sbjct: 195 PDVYTFPCVLRTCGGIPDW-RMGREVHAHVLRFGFGD---EVDVLNALVTMYAKCGDIVA 250
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR +F+ + DC+S+NAMIAG+ +N E L LF M++ ++QP+ T+ SV A
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L + ++ H ++ GF +V+ CN++I MY+ G + D+ F ++ + + +SW +
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I+ + ++G +KAL ++ M L+ PD +T S L+AC G+++ + L EL + G
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHEL-AQNKG 429
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
I L+++ +++ ++KA ++ + M E D W S++A N
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFN 478
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 211/468 (45%), Gaps = 96/468 (20%)
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM----PR 171
N M++ + I A+ F MPER+ ++N M+ G+ K G LEEA L+ +M R
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 172 RNVISY-----------------------------------TAMLDGFMKKGEVDKARAL 196
+V ++ A++ + K G++ AR +
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEAR-ELFYRMPDYD--------KNVFVVTAMIT- 246
D M+ + +SW MI G+ +N CEA ELF M + + +V V + M++
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHE-CEAGLELFLTMLENEVQPNLMTITSVTVASGMLSE 313
Query: 247 -GFCK---------------------------VGMLENARLLFERIQPKDCVSFNAMIAG 278
GF K +G + +A +F R++ KD +S+ AMI+G
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
Y +NG ++AL +++ M ++ PDD T+ S AC+ L L+ G + H L GF
Sbjct: 374 YEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V V NA++ MY++ I + F+ + ++VSW+++IA F + +AL +F M L
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-L 492
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT--CLVDILSRAGQ 456
P+ +TF++ LSAC G + ++ +++ GI SE Y L+D+ + GQ
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRC-GI--GSEGYVPNALLDLYVKCGQ 549
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACV-----------INLNVELGE 493
AW + E D W +L+ V N VE+GE
Sbjct: 550 TSYAWA-QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE 596
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 287/538 (53%), Gaps = 14/538 (2%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C++++ F+ A I A S +G +S AR++FD++++KD+++W +I Y +N E
Sbjct: 71 CVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSE 130
Query: 100 SKNLFQSMPVKNIVSWNCMIAG----CIDNDRIDDA----FDYFQAMPERNTATYNAMIS 151
+ F M V N AG C+ D + ER+ ++
Sbjct: 131 ALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLE 190
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ + G ++A R F MP+ +VI ++ M+ F + G+ +KA + M V+
Sbjct: 191 LYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFT 250
Query: 212 ITGYVKNERFCEARELFYRMPDY------DKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+ ++ E+ +L + + +VFV A++ + K G +E + LFE +
Sbjct: 251 FSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALS 310
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
++ VS+N +I Y Q G E AL LFS M++ +Q + T S+ AC+ L L G Q
Sbjct: 311 DRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQ 370
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H L + + +V+V NA+I MY++CG I D+ F + + VSWN II ++ HG
Sbjct: 371 VHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGL 430
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+A+ F+ M PD +TF+ +LSAC + G+++E F M + YGI P EHYT
Sbjct: 431 GVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYT 490
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C+V ++ R+G L++A + + +PFE +W +LL ACVI+ +VELG ++A+++ EL+P+
Sbjct: 491 CMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPR 550
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
+ A +V+LSN+YA A W +V VR MK +GV K+ SWIE VH F D SH
Sbjct: 551 DEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSH 608
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 174/399 (43%), Gaps = 71/399 (17%)
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------------------------- 232
D M +N VS+ +I GY ++ +F EA ELF R+
Sbjct: 4 DEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAE 63
Query: 233 ------------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
Y N F+ TA+I + G + AR +F+ I KD VS+ MIA YA
Sbjct: 64 LGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYA 123
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
+N EAL FS M +P++ T V AC LQ + G+ H V++ +E ++
Sbjct: 124 ENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLY 183
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V ++ +Y+RCG D+ AF + +++ W+ +I+ FAQ G EKAL F QM
Sbjct: 184 VGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAF 243
Query: 401 FDPDGITFLSLLSAC-------------GHAGKVNESMDLF---ELM---VKVYGIIPSS 441
P+ TF S+L A GHA K S D+F LM K I S
Sbjct: 244 VIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSM 303
Query: 442 EHYTCLVD---------ILS--RAGQLEKAWQITQGM---PFEADTGVWGSLLAACVINL 487
E + L D I+S + G E+A + M +A + S+L AC
Sbjct: 304 ELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLA 363
Query: 488 NVELG-ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
+ELG ++ + + Q+ AV L ++YA G +D
Sbjct: 364 ALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKD 402
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 184/405 (45%), Gaps = 50/405 (12%)
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM--------PERNTATYNAMIS-GF 153
+F MP +N VS+ +I G +++ +AF+ F + P T ++S +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
+ GR+ L I TA++D + G V AR + D +S K++VSWT MI
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIG-TALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 214 GYVKNERFCEARELFYRM-------------------------------------PDYDK 236
Y +N+ F EA E F +M +Y++
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+++V ++ + + G ++A F + D + ++ MI+ +AQ+G +E+AL +F M
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ + P+ T SV A + ++ L+ + H ++ G +V V NA++ Y++CG I
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
S F + N VSWNTII ++ Q G E+AL FS M +T+ S+L AC
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360
Query: 417 HAGKVNESMDLFELMVK-VYGIIPSSEHYTCLVDILSRAGQLEKA 460
+ + + L K +YG L+D+ ++ G ++ A
Sbjct: 361 TLAALELGLQVHCLTAKTIYG--QDVAVGNALIDMYAKCGSIKDA 403
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
++F+ + ++ VSF +I GYAQ+ EA LF+ + + + +V +++
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
GR H V++ G+ +N + A+I YS G + + F +I S ++VSW +IA
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC-----GHAG--------KVNESM 425
++A++ + +AL FFSQM + GF P+ TF +L AC AG K N
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
DL+ G+ L+++ +R G + AW+ MP
Sbjct: 181 DLY------VGV--------GLLELYTRCGDNDDAWRAFGDMP 209
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 191/642 (29%), Positives = 304/642 (47%), Gaps = 120/642 (18%)
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV----SWN 116
S+ + AA +FD+M ++V +W +I G ++G + F M I+ +++
Sbjct: 112 SKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYS 171
Query: 117 CMIAGCIDND-----------------------------------RIDDAFDYFQAMPER 141
+I CI D I+D++ F M E
Sbjct: 172 AIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEH 231
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMP------------------------------- 170
N ++NAMISG +G EA LF +M
Sbjct: 232 NQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQ 291
Query: 171 --------RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV---VSWTVMITGYVKNE 219
NV+ TA++D + K G + AR++ D +F N W MI+GY ++
Sbjct: 292 NCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFD-TNFINCGVNTPWNAMISGYSQSG 350
Query: 220 RFCEARELFYRMPDYDKN--------------------------------------VFVV 241
EA EL+ +M V V
Sbjct: 351 CSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVN 410
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
A+ + K G LE+ R +F+R++ +D VS+ ++ Y+Q+ + EEAL F M +
Sbjct: 411 NAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFA 470
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P+ T SV +C++L L GRQ H L+ + G + + +A+I MY++CG I ++
Sbjct: 471 PNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKV 530
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F +I +P++VSW II+ +AQHG E AL F +M L+G + +T L +L AC H G V
Sbjct: 531 FDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMV 590
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
E + F+ M YG++P EHY C++D+L R G+L+ A + + MP E + VW +LL
Sbjct: 591 EEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLG 650
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
C ++ NVELGE+AA+K+ + P+ SA YV+LSN Y G + D +R +MK+QGV K+
Sbjct: 651 GCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKE 710
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
YSWI + +VH F GD HP +I+++L+ ++K++
Sbjct: 711 PGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAM 752
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 41/361 (11%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML----------DGFMKKGEVDKARA 195
+N + K A +F++MP+RNV S+T M+ DGF E+ +
Sbjct: 104 FNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGI 163
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
L D ++ ++ + + ++ + A+ + M + ++FV T+++ + K+G +E
Sbjct: 164 LPDKFAYSAIIQSCIGLDS-LELGKMVHAQIV---MRGFATHIFVSTSLLNMYAKLGSIE 219
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
++ +F + + VS+NAMI+G NG+ EA LF M P+ TLVSV A
Sbjct: 220 DSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVG 279
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS--- 372
L +N G++ G E NV V A+I MYS+CG + D+ R + N ++
Sbjct: 280 KLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDA----RSVFDTNFINCGV 335
Query: 373 ---WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA-----GKVNES 424
WN +I+ ++Q G ++AL + QM NG D T+ S+ +A + G+V
Sbjct: 336 NTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHG 395
Query: 425 MDL---FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
M L +LMV + D S+ G LE ++ M E D W +L+
Sbjct: 396 MVLKCGLDLMVVSVN--------NAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVT 446
Query: 482 A 482
A
Sbjct: 447 A 447
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 173/420 (41%), Gaps = 76/420 (18%)
Query: 18 PPILRILSTPDSCG-----NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQL 72
P + ++S + G N NC L V V A I S+ G + AR +
Sbjct: 266 PNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSV 325
Query: 73 FDQ--MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDD 130
FD + WNA+I+GY Q+G QE+ L+ M I S D
Sbjct: 326 FDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS---------------D 370
Query: 131 AFDYFQAMPERNTATYNAM-ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
+ Y + +NA+ S L+ GR+ L + V A+ D + K G
Sbjct: 371 LYTY--------CSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGF 422
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNE-------RFCEARELFYRMPDY-------- 234
++ R + D M +++VSWT ++T Y ++ FC RE + +
Sbjct: 423 LEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLIS 482
Query: 235 ----------------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
D + +A+I + K G + A +F++I D VS+
Sbjct: 483 CASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSW 542
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
A+I+GYAQ+G+ E+AL+LF M ++ + TL+ V ACS ++ EG + +
Sbjct: 543 TAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGL-FYFQQME 601
Query: 333 NGF----EANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+G+ E C +I + R G + D+ E + PN + W T++ HG+ E
Sbjct: 602 DGYGVVPEMEHYAC--IIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE 659
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 297/564 (52%), Gaps = 51/564 (9%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----PVKNIVSWNCMIAGCID 124
A +F+ + +++ WN ++ G+ + + ++ M + N S+ ++ C
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 125 NDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
+ ++ + + + ++IS + ++G LE+A ++F+ R+V+S TA+
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD- 233
+ G+ +G+ AR + D ++ ++VVSW MITGYV+N R+ EA ELF M PD
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 234 ----------------------------------YDKNVFVVTAMITGFCKVGMLENARL 259
+ ++ +V A+I + K G +E A
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LFE + KD VS+N +I GY + +EAL LF M++ P+D TL+SV AC+ L
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGA 316
Query: 320 LNEGRQSHVLVIRN--GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
++ GR HV + + G S+ ++I MY++CG I + F + +L SWN +I
Sbjct: 317 IDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMI 376
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
FA HG A FS+M N +PD ITF+ LLSAC H+G ++ +F+ M + Y +
Sbjct: 377 FGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNL 436
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAK 497
P EHY C++D+L +G ++A ++ MP E D +W SLL AC + N+EL E A+
Sbjct: 437 TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQ 496
Query: 498 KMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
K+ +++P+NS YV+LSN+YA AG W DV RVR ++ +G+ K S IE+ + VH F+
Sbjct: 497 KLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFI 556
Query: 558 GGDMSHPCIDKIHLELKRASVQMK 581
GD HP +I+ L+ VQ++
Sbjct: 557 IGDKLHPRRREIYHMLEEMDVQLE 580
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 134/542 (24%), Positives = 238/542 (43%), Gaps = 99/542 (18%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+V+ + IS +R G + AR++FD + +DV++ A+ITGY G + ++ +F + +
Sbjct: 100 YVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITER 159
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRLF 166
++VSWN MI G ++N R ++A + F+ M N T +++S + G +E ++
Sbjct: 160 DVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVH 219
Query: 167 EQMP--------RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
+ ++ A++D + K G+V+ A L + +S K+VVSW +I GY
Sbjct: 220 SWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHT 279
Query: 219 ERFCEARELFYRM------PD--------------------------YDKNVFVV----- 241
+ EA LF M P+ DK + V
Sbjct: 280 NLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETS 339
Query: 242 --TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
T++I + K G +E A +F + + S+NAMI G+A +G A A LFS M
Sbjct: 340 LRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNR 399
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++PDD T V + +ACS LL+ GRQ + ++ Y+
Sbjct: 400 VEPDDITFVGLLSACSHSGLLDLGRQ---------------IFKSMTQDYNL-------- 436
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
+P L + +I G +++A M + +PDG+ + SLL AC G
Sbjct: 437 -------TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPM---EPDGVIWCSLLKACKKHG 486
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG-- 477
+ + + ++K+ +S Y L +I + AG+ E ++ + + V G
Sbjct: 487 NLELAESFAQKLIKIEP--ENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCS 544
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL---YAAAGMWRDVTRVRLLMK 534
S+ V++ + +G+ +L P+ +Y ML + AG D + V M+
Sbjct: 545 SIEVDSVVHEFI-IGD-------KLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEME 596
Query: 535 EQ 536
E+
Sbjct: 597 EE 598
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 73/164 (44%), Gaps = 10/164 (6%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T + + I ++ G I AA Q+F+ M + + +WNA+I G+ +G + +LF
Sbjct: 335 TNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSR 394
Query: 107 MPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHG 157
M + +++ +++ C + +D F++M + T Y MI G
Sbjct: 395 MRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSG 454
Query: 158 RLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYM 200
+EA + MP + + + ++L K G ++ A + + +
Sbjct: 455 LFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKL 498
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 283/557 (50%), Gaps = 45/557 (8%)
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDD 130
QL +V ++ Y + ++E+ +F MP +++V WN +I+G N
Sbjct: 200 QLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKT 259
Query: 131 AFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY----TAMLD 182
A + M E ++ T +++ G L + R S+ TA++D
Sbjct: 260 ALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVD 319
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--------- 233
+ K G V AR + D M+ K VVSW MI GYV+N A E+F +M D
Sbjct: 320 MYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVT 379
Query: 234 ----------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+V V+ ++I+ + K ++ A +FE +Q
Sbjct: 380 VMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQ 439
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
K VS+NAMI GYAQNG EA+ F M +++PD T+VSV A + L +L + +
Sbjct: 440 HKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKW 499
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H LVIR + NV V A++ MY++CG + + F + ++ +WN +I + HG
Sbjct: 500 IHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGL 559
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+ AL F +M P+ +TFL +LSAC H+G V E F M K YG+ P+ +HY
Sbjct: 560 GKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYG 619
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
+VD+L RA +L +AW Q MP E V+G++L AC I+ NVELGE AA ++ +LDP
Sbjct: 620 AMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPD 679
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
+ +V+L+N+YA A MW V RVR M+++G+ K +S +E+ N+VH F G SHP
Sbjct: 680 DGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQ 739
Query: 566 IDKIHLELKRASVQMKS 582
KI+ L+ ++K+
Sbjct: 740 AKKIYAFLETLGNRIKA 756
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 206/440 (46%), Gaps = 49/440 (11%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PE 140
+++ + + G L E+ +FQ + K ++ M+ G N +DDA +F M P
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPV 174
Query: 141 RNTATYNAMISG---FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
TY + G L+ G+ E +L NV + T +++ + K V++A +
Sbjct: 175 VYNFTYLLKVCGDNADLRKGK-EIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMF 233
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------------ 233
D M +++V W +I+GY +N A EL RM PD
Sbjct: 234 DRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLR 293
Query: 234 -------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
++ V V TA++ + K G + ARL+F+R+ K VS+N+MI GY
Sbjct: 294 IGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYV 353
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
QNG A+ +F M+ ++ + T++ AC+ L + +GR H L+ + ++VS
Sbjct: 354 QNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVS 413
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V N++I+MYS+C + + F + LVSWN +I +AQ+G +A+ +F +M L
Sbjct: 414 VMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQN 473
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
PD T +S++ A + ++ + L+++ + + T LVD+ ++ G + A
Sbjct: 474 IKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTC-LDKNVFVATALVDMYAKCGAVHTA 532
Query: 461 WQITQGMPFEADTGVWGSLL 480
++ M E W +++
Sbjct: 533 RKLFDMMD-ERHVTTWNAMI 551
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 154/292 (52%), Gaps = 16/292 (5%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
+V V+ A + S+ G + AR +FD+MT K V++WN++I GY QNG + +FQ M
Sbjct: 310 FVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMM 369
Query: 109 VKNIVSWNCMIAG----CIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLE 160
+ + N + G C D ++ + + + + + N++IS + K R++
Sbjct: 370 DEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVD 429
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV--SWTV--MITGYV 216
A +FE + + ++S+ AM+ G+ + G +++A M +N+ S+T+ +I
Sbjct: 430 IAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALA 489
Query: 217 KNERFCEAR---ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ +A+ L R DKNVFV TA++ + K G + AR LF+ + + ++N
Sbjct: 490 ELSVLPQAKWIHGLVIRTC-LDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWN 548
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
AMI GY +G+ + AL LF M K ++P++ T + V +ACS L+ EG Q
Sbjct: 549 AMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQ 600
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 146/303 (48%), Gaps = 9/303 (2%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y +++F T +++ FCK G L A +F+ I+ K ++ M+ GYA+N ++A+ F
Sbjct: 106 YSEHLFQ-TKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFC 164
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M ++P + C L +G++ H +I NGF +NV V+ MY++C
Sbjct: 165 RMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCR 224
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ ++ F ++ +LV WNTII+ +AQ+G + AL +M G PD IT +S+L
Sbjct: 225 LVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILP 284
Query: 414 ACGHAG--KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
A G ++ S+ + + + S T LVD+ S+ G + A I M +
Sbjct: 285 AVADVGSLRIGRSIHGYSMRAGFESFVNVS---TALVDMYSKCGSVGTARLIFDRMTGKT 341
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
W S++ V N + +KM + + + V VM L+A A + DV + R
Sbjct: 342 VVS-WNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVM-GALHACADLG-DVEQGRF 398
Query: 532 LMK 534
+ K
Sbjct: 399 VHK 401
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 10/151 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR + VFV A + ++ G + AR+LFD M + V TWNA+I GY +G + +
Sbjct: 504 VIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAA 563
Query: 101 KNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
LF+ M + N V++ C+++ C + +++ F YF +M E Y AM+
Sbjct: 564 LELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVD 623
Query: 152 GFLKHGRLEEATRLFEQMPRRNVIS-YTAML 181
+ RL EA ++MP IS + AML
Sbjct: 624 LLGRANRLNEAWDFIQKMPIEPAISVFGAML 654
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C++++ L+ Q L+I+NG + +++++ + G + ++ F+ I +
Sbjct: 87 CTSMKELH---QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELY 143
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+T++ +A++ + A+ FF +M +G P F LL CG + + ++ ++
Sbjct: 144 HTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLI- 202
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
V G + T +V++ ++ +E+A+++ MP E D W ++++ N
Sbjct: 203 VNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMP-ERDLVCWNTIISGYAQN 254
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 306/562 (54%), Gaps = 26/562 (4%)
Query: 10 TYLKR---ILFPPILRILSTPDSCGNFTPHSSNC------------LIRLFSTQYVFVNN 54
T+++R + FP L L + D+ + + C +IR Q F+ +
Sbjct: 2 TFIRRYTALTFPDYLPTLRSFDTTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFIIS 61
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF----QSMPVK 110
++ + S +F+ +++ + WN I GY +N + + +LF +S V
Sbjct: 62 QFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVP 121
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEEATRLF 166
+ ++ +I C + + + + ++I + K G + A ++F
Sbjct: 122 DKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVF 181
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
++M RNV+S+TAM+ G+ ++ +AR L D M KN VSW +I+GYVK AR+
Sbjct: 182 DEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARK 241
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+F MP +NV T MI G+ K G + +AR +FE +D V+++A+I+GY QNG
Sbjct: 242 MFDEMPH--RNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPN 299
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN-VSVCNAV 345
EA+++F M +++PD+ +VS+ +ACS + L + V ++ + + V A+
Sbjct: 300 EAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAAL 359
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I M ++CG + + F ++ +L+S+ +++ + HG +A+ FS+M G PD
Sbjct: 360 IDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDD 419
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
+ F +L+AC AG V+E FE M Y I+PS +HY C+VD+L RAG+L++A+++ +
Sbjct: 420 VAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLK 479
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
MP E G WG+LL AC ++ ++ELGE+ A ++ EL+PQN+ YV+LSN+YAAA W D
Sbjct: 480 SMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLD 539
Query: 526 VTRVRLLMKEQGVTKQCAYSWI 547
V+ +R M+E+G+ K SWI
Sbjct: 540 VSLLRNKMRERGIRKIPGCSWI 561
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 258/484 (53%), Gaps = 25/484 (5%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D T N ++ Y G ++ LF+ +P +N++SWN +I G + N ++ A F MP
Sbjct: 76 DRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMP 135
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
RN AT+NAM++G G EE+ F M R + L + L D
Sbjct: 136 ARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFR-----CCAGLRDV 190
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
+S + V ++ V D+++ V +++ + + G L +
Sbjct: 191 VSGRQVHAYVV--------------------RSGLDRDMCVGSSLAHMYMRCGFLRDGEA 230
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+ + VS N I+G QNG AE AL F M ++ + T VS T+CS L
Sbjct: 231 ALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 290
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L +G+Q H L I+ G + V V +++ MYSRCG + DSE + +LV + +I+A
Sbjct: 291 LAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA 350
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ HGH +KA+ F QM G +P+ +TFL+LL AC H+G +E M+ FELM K YG+ P
Sbjct: 351 YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQP 410
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
S +HYTC+VD+L R+G L +A + MP + D +W +LL+AC ++ E A+++
Sbjct: 411 SVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERV 470
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
ELDP +SA YV+LSN+ A + W DV++VR M+EQ V K+ SW+E+ ++H F G
Sbjct: 471 IELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTG 530
Query: 560 DMSH 563
D SH
Sbjct: 531 DESH 534
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 172/392 (43%), Gaps = 59/392 (15%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F N + A + G AR LF+++ ++V++WN +I GY +NG L+ ++ LF MP +
Sbjct: 78 FTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPAR 137
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAM------PE--------RNTATYNAMISGFLKH 156
N+ +WN M+AG ++ +++ +F AM P+ R A ++SG H
Sbjct: 138 NVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVH 197
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
+ + L M + +++ M GF++ GE RAL N+VS I+G
Sbjct: 198 AYVVRSG-LDRDMCVGSSLAHMYMRCGFLRDGEA-ALRALPSL----NIVSCNTTISGRT 251
Query: 217 KNERFCEARELFYRM-------------------------------------PDYDKNVF 239
+N A E F M DK V
Sbjct: 252 QNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVP 311
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V+T+++ + + G L ++ + D V +AMI+ Y +G ++A+ LF M+
Sbjct: 312 VMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAG 371
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDS 358
+P++ T +++ ACS L +EG L+ + G + +V ++ + R G + ++
Sbjct: 372 AEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEA 431
Query: 359 E-LAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
E L P+ V W T+++A ++ A
Sbjct: 432 EDLILSMPVQPDGVIWKTLLSACKTQKKFDMA 463
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 311/591 (52%), Gaps = 51/591 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N+ I S+ A Q+F++M +D ++WN +I+ + Q+GF + +F M
Sbjct: 212 LFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCN 271
Query: 110 K----NIVSWNCMIAGCIDND-------------RIDDAFDY------------------ 134
+ N +++ +++ C R++ + D
Sbjct: 272 QGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDL 331
Query: 135 ----FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD-------- 182
F+++ E + ++N++I+G + G E+A LF QM R +V+ +L
Sbjct: 332 AKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSG 391
Query: 183 -GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
+ GE+ + M V +IT Y K +A +F MP +N
Sbjct: 392 PDYASTGELLHGYTIKSGMGSSAPVG-NAIITMYAKCGDTDKADLVFRLMPL--RNTISW 448
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
TAMIT F + G + AR F+ + ++ V++N+M++ Y QNG +EE L+L+ M +Q
Sbjct: 449 TAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQ 508
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD T + AC+ L ++ G Q + G NVSV N+++TMYSRCG I +++
Sbjct: 509 PDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNT 568
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F I +L+SWN ++AAFAQ+G K + F M P+ I+++S+LS C H G V
Sbjct: 569 FDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLV 628
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
E F+ M +V+GI P++EH++C+VD+L RAG LE+A + +GMPF+ + VW +LL
Sbjct: 629 AEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLG 688
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
+C ++ ++ L E AAKK+ ELD + S YV+LSN+Y+ +G +V +R LMK +G+
Sbjct: 689 SCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTS 748
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATS 592
SWIE+ N+VH F + SHP I +++L+L+ ++ ++ + +S
Sbjct: 749 RGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITVESS 799
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/535 (21%), Positives = 218/535 (40%), Gaps = 115/535 (21%)
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP--VKNIVSWNCM 118
S G A Q+F + +++ TWN +I + + +++ LF MP VK+ VSW M
Sbjct: 54 SNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTM 113
Query: 119 IAGCIDNDRIDDAFDYFQAMPERN------------------------------------ 142
I+G N +F+ F M
Sbjct: 114 ISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVS 173
Query: 143 -------TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
T N+++ ++K G ++ A +F + R ++ + +M+ G+ + KA
Sbjct: 174 KLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQ 233
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDKNVFVVTA------ 243
+ + M ++ VSW +I+ + ++ + +F M P++ V++A
Sbjct: 234 IFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSD 293
Query: 244 -------------------------MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+I + K G L+ A+ +F+ ++ D +S+N++I G
Sbjct: 294 LKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITG 353
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
G+ E+AL LF+ M + + D+ L ++ CS + G H I++G ++
Sbjct: 354 VVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSS 413
Query: 339 VSVCNAVITMYSRCGGILDSELAFR-------------------------------QIHS 367
V NA+ITMY++CG ++L FR +
Sbjct: 414 APVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPE 473
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N+V+WN++++ + Q+G E+ L + M NG PD ITF + + AC V M +
Sbjct: 474 RNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQV 533
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
K +G+ + +V + SR G +++A + + D W ++LAA
Sbjct: 534 VTHATK-FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSID-DKDLISWNAMLAA 586
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 210/464 (45%), Gaps = 25/464 (5%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER--NTATYNA 148
Y G ++ +FQ +NI +WN MI + + R+ DA F MP R ++ ++
Sbjct: 53 YSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTT 112
Query: 149 MISGFLKHGRLEEATRLFEQMPRR--------NVISYTAMLDGFMKKGEVDKA---RALS 197
MISG+ ++G + F M R + S+T+++ G+ A AL
Sbjct: 113 MISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALV 172
Query: 198 DYMSFKNVVSWTVMITG-YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+ F + G YVK A +F+ + ++F +MI G+ ++
Sbjct: 173 SKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIER--PSLFCWNSMIYGYSQMYGPYK 230
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A +F R+ +D VS+N +I+ ++Q+G + L +F M P+ T SV +AC++
Sbjct: 231 ALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAS 290
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L G H ++R ++ N +I MY++CG + ++ F+ + + +SWN++
Sbjct: 291 TSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSL 350
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I G E ALI F+QM + D ++L C + L +K G
Sbjct: 351 ITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKS-G 409
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
+ S+ ++ + ++ G +KA + + MP +T W +++ A + + ++G+ A
Sbjct: 410 MGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITA--FSRSGDIGK--A 464
Query: 497 KKMRELDPQNSAVY--VMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
+ ++ P+ + V MLS Y G + ++ + M+ GV
Sbjct: 465 RGYFDMMPERNIVTWNSMLST-YVQNGFSEEGLKLYVSMRSNGV 507
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 156/366 (42%), Gaps = 38/366 (10%)
Query: 12 LKRILFPPILRILSTPD--SCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAA 69
L + P IL + S PD S G + I+ V NA I+ ++ G A
Sbjct: 377 LDEFILPTILGVCSGPDYASTGELLHGYT---IKSGMGSSAPVGNAIITMYAKCGDTDKA 433
Query: 70 RQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRID 129
+F M ++ I+W A+IT + ++G + +++ F MP +NIV+WN M++ + N +
Sbjct: 434 DLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSE 493
Query: 130 DAFDYFQAM------PERNTATYNAMISGFLKHGRL-----EEATRLFEQMPRRNVISYT 178
+ + +M P+ T T + L +L AT+ + NV
Sbjct: 494 EGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSL---NVSVAN 550
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDK 236
+++ + + G + +A+ D + K+++SW M+ + +N + + F M +
Sbjct: 551 SIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKP 610
Query: 237 NVFVVTAMITGFCKVGMLENARLLFER------IQPKDCVSFNAMIAGYAQNGVAEEALR 290
N ++++G +G++ + F+ I P + F+ M+ + G+ E+A
Sbjct: 611 NHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTN-EHFSCMVDLLGRAGLLEQAKD 669
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSA---LQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
L G M +P+ ++ +C L+L + + + G E V + N
Sbjct: 670 LIEG---MPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSN---- 722
Query: 348 MYSRCG 353
MYS G
Sbjct: 723 MYSESG 728
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
R+ H +I +G ++++ + N ++ MYS CG D+ F++ H N+ +WNT+I A
Sbjct: 27 ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
A F +M + D +++ +++S G + S + F LM++
Sbjct: 87 SSRMSDAEKLFDEMPVRV--KDSVSWTTMISGYSQNGFHSRSFETFSLMIR 135
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 302/558 (54%), Gaps = 19/558 (3%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LI+ Q ++ I++ S +S+A +F+Q+ +V +N +I Y +G ES
Sbjct: 45 LIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSG--NES 102
Query: 101 KNL-----FQSMPVKNIVSWNC----MIAGCIDNDRIDDAFDYFQAMPER-----NTATY 146
+L M V +++ N ++ GC + A E+ +
Sbjct: 103 NSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVP 162
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N++I + + G +E A ++F M R+V+S+ +M+ G +K G++D A + D M ++ V
Sbjct: 163 NSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRV 222
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
SW M+ G+ K +A +LF RM + D + + M+ G+ K G ++ AR+LF+R
Sbjct: 223 SWNTMLDGFTKAGEMDKAFKLFERMAERD--IVSWSTMVCGYSKNGDMDMARMLFDRCPV 280
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K+ V + +I+GYA+ G +EA+ L M K ++ DD +S+ AC+ +L G++
Sbjct: 281 KNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKM 340
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGH 385
H +R+ F + V N+ I MY++CG + D+ F + + +LVSWN++I F HGH
Sbjct: 341 HDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGH 400
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
EK++ F+ M GF PD TF+ LL AC HAG VNE F M +VYGI+P EHY
Sbjct: 401 GEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYG 460
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C+VD+L R G L++A+ + + MPFE + + G+LL AC ++ +V+L +K + +L P
Sbjct: 461 CMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPS 520
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
+ + +LSN+YA +G W +V +VR M ++G K S IE+ +VH F D SHP
Sbjct: 521 DPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPK 580
Query: 566 IDKIHLELKRASVQMKSV 583
I+ + R ++ V
Sbjct: 581 SGDIYNMIDRLVHDLRQV 598
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 21/237 (8%)
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
N +Q H +I+ + + +I YS + + F Q+ PN+ +N +I A+
Sbjct: 36 NHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAY 95
Query: 381 AQHGHYEKALIFFS---QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG- 436
+ G+ +L F +M ++G D T+ LL C + + + V+ G
Sbjct: 96 SLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGF 155
Query: 437 ----IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
+P+S L+D R G +E A ++ GM E D W S++ V N ++
Sbjct: 156 YWDIFVPNS-----LIDCYCRCGDVEMAMKVFSGME-ERDVVSWNSMVGGLVKNGDL--- 206
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV----TKQCAYS 545
+ A K E+ ++ + + + + AG ++ M E+ + T C YS
Sbjct: 207 DGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYS 263
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 183/631 (29%), Positives = 312/631 (49%), Gaps = 116/631 (18%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
FS++ +V NA ++ SR+G +S+A Q+F M+ +D +++N++I+G Q G++ + LF
Sbjct: 282 FSSE-TYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALF 340
Query: 105 QS----------MPVKNIVSWNCMIAGCIDN----------------------------- 125
+ + V +++S C G + N
Sbjct: 341 KKMNLDCQKPDCVTVASLLS-ACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVK 399
Query: 126 -----------------DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
D ++ +F F M LK AT L EQ
Sbjct: 400 CSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQ 459
Query: 169 MPRR--------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ + NV + ++D + K G++D A + + +VVSWT MI GY ++++
Sbjct: 460 IHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDK 519
Query: 221 FCEARELFYRMPD-------------------------------------YDKNVFVVTA 243
F EA LF M D Y ++ + A
Sbjct: 520 FTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNA 579
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+++ + + G + A F++I KD VS+N++++G+AQ+G EEAL +F+ M K ++ +
Sbjct: 580 LVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEIN 639
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
T S +A + + + G+Q H ++ + G+++ V NA+IT+Y++CG I D
Sbjct: 640 SFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD------ 693
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+SWN++I ++QHG +AL F M P+ +TF+ +LSAC H G V+E
Sbjct: 694 -------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDE 746
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ F M + + ++P EHY C+VD+L R+G L +A + + MP + D VW +LL+AC
Sbjct: 747 GISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSAC 806
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
++ N+++GE AA + EL+P++SA YV++SN+YA +G W R R +MK++GV K+
Sbjct: 807 NVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPG 866
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
SW+E+ N VH F GD +HP D I+ L+
Sbjct: 867 RSWVEVDNSVHAFFAGDQNHPRADMIYEYLR 897
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 199/419 (47%), Gaps = 46/419 (10%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV-- 206
+I +L G L A +F++MP R++ + + + F+ + + + L M KNV
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162
Query: 207 --SWTVMITGYVKNE---RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
+ V++ G N RF E ++ + F+ +I + K G L +A+ +F
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
E ++ +D VS+ AMI+G +QNG EEA+ LF + V +AC+ ++
Sbjct: 223 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFE 268
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G+Q H LV++ GF + VCNA++T+YSR G + +E F + + VS+N++I+ A
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLA 328
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG-------------KVNESMD-- 426
Q G+ +AL F +M L+ PD +T SLLSAC G K + D
Sbjct: 329 QQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIV 388
Query: 427 ----LFELMVKVYGIIPSSEHYTCL--VDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
L +L VK I + E + C +D L+++ Q+ QI +P + + S+L
Sbjct: 389 VEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVP---NQFTYPSIL 445
Query: 481 AACVINLNVELGELAAKKMRELDPQ-NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
C +LGE ++ + Q N V +L ++YA G ++ +KE V
Sbjct: 446 KTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDV 504
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 233/516 (45%), Gaps = 96/516 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF----- 104
F+ N I + G +S+A+++F+ + +D ++W A+I+G QNG+ +E+ LF
Sbjct: 199 TFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVL 258
Query: 105 ---------------QSMPVKNIVS-----WNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
+ +K S N ++ + + A F M +R+
Sbjct: 259 SACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRV 318
Query: 145 TYNAMISGFLKHGRLEEATRLFEQM----PRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
+YN++ISG + G + A LF++M + + ++ ++L G + + Y
Sbjct: 319 SYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSY- 377
Query: 201 SFKNVVSWTVMITG-----YVKNERFCEARELFY---RMPDYDKNVFVVTAM-ITG---- 247
+ K ++ +++ G YVK A E F ++ + +K+ + T M I G
Sbjct: 378 AIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPN 437
Query: 248 -FCKVGMLEN-----ARLLFERIQP---KDCVSFNAMIAG-----YAQNGVAEEALRLFS 293
F +L+ A L E+I K FN ++ YA++G + AL++F
Sbjct: 438 QFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFR 497
Query: 294 GMIKMD-------------------------------MQPDDATLVSVFTACSALQLLNE 322
+ + D ++ D+ S +AC+ +Q L++
Sbjct: 498 RLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQ 557
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GRQ H +G+ ++S+ NA++++Y+RCG + ++ AF QI++ + VSWN++++ FAQ
Sbjct: 558 GRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQ 617
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G++E+AL F+QM G + + TF S +SA + V + M++ G +E
Sbjct: 618 SGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHG-MIRKTGYDSETE 676
Query: 443 HYTCLVDILSRAGQLEK-AWQ--IT----QGMPFEA 471
L+ + ++ G ++ +W IT G FEA
Sbjct: 677 VSNALITLYAKCGTIDDISWNSMITGYSQHGCGFEA 712
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 198/436 (45%), Gaps = 50/436 (11%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV----SWNCMI 119
G ++ A +FD+M + + WN I + + LF+ M KN+ + ++
Sbjct: 111 GDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVL 170
Query: 120 AGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
GC N +F + + + E +T N +I + K+G L A ++FE +
Sbjct: 171 RGCSGNAV---SFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKA 227
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL--FY 229
R+ +S+ AM+ G + G ++A L F +V ++ K E F ++L
Sbjct: 228 RDSVSWVAMISGLSQNGYEEEAMLL-----FCQIV-----LSACTKVEFFEFGKQLHGLV 277
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+ +V A++T + + G L +A +F + +D VS+N++I+G AQ G AL
Sbjct: 278 LKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRAL 337
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF M +PD T+ S+ +AC+++ L G+Q H I+ G +++ V +++ +Y
Sbjct: 338 ALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLY 397
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
+C I + F + Q + K+ F+QM + G P+ T+
Sbjct: 398 VKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYP 442
Query: 410 SLLSACGHAGKVNESMDLFELMVKV---YGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
S+L C G + + ++K + + SS L+D+ ++ G+L+ A +I +
Sbjct: 443 SILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSS----VLIDMYAKHGKLDHALKIFRR 498
Query: 467 MPFEADTGVWGSLLAA 482
+ E D W +++A
Sbjct: 499 LK-ENDVVSWTAMIAG 513
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 280/538 (52%), Gaps = 43/538 (7%)
Query: 87 IITGYWQNGFLQESKNLFQSMPV--KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE---- 140
+++ Y + G + E++ +F+ MP+ +++V+WN M+ NDR +AF M +
Sbjct: 479 LVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVL 538
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
+ ++ +++S + + R+ TA++ + E+++AR++ + M
Sbjct: 539 PDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEM 598
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRM------PD--------------------- 233
+VVSWT M++ +N F E LF RM PD
Sbjct: 599 DHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGK 658
Query: 234 ----------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
+ ++ V A++ + G A FE ++ +D VS+N M A YAQ G
Sbjct: 659 VIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAG 718
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+A+EA+ LF M ++PD T + L+++G+ H L +G +++VSV
Sbjct: 719 LAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVAT 778
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
++ +Y++CG + ++ FR +V N II A AQHG E+A+ F +M G P
Sbjct: 779 GLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRP 838
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
D T +S++SACGHAG V E F M + +GI P+ EHY C VD+L RAGQLE A QI
Sbjct: 839 DVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQI 898
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW 523
+ MPFE +T VW SLL C + + ELGE A+++ ELDP NSA +V+LSN+Y A G W
Sbjct: 899 IRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKW 958
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+D R M ++ V SW EIG +VH F+ GD SHP D+I++ L + + M+
Sbjct: 959 KDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMR 1016
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 215/452 (47%), Gaps = 40/452 (8%)
Query: 43 RLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQ 98
R++ + Y V + NA IS ++ G SAA +F ++ K DVI+WN ++
Sbjct: 360 RIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFG 419
Query: 99 ESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAM 149
+ N F M + I VS+ ++ C +++ +D + R ++ +
Sbjct: 420 KVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATML 479
Query: 150 ISGFLKHGRLEEATRLFEQMP--RRNVISYTAMLDGFMKKG----------EVDKARALS 197
+S + K G + EA +F++MP R+++++ ML + + E+ + L
Sbjct: 480 VSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLP 539
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD---KNVFVVTAMITGFCKVGML 254
D +SF +V+S +C RM + ++ + TA+I+ + L
Sbjct: 540 DALSFTSVLS-----------SCYCSQEAQVLRMCILESGYRSACLETALISMHGRCREL 588
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E AR +F + D VS+ AM++ A+N +E LF M + PD TL + C
Sbjct: 589 EQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTC 648
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
A L G+ H V G EA+++V NA++ MYS CG ++ F + + +LVSWN
Sbjct: 649 LASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWN 708
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+ AA+AQ G ++A++ F QM L G PD +TF + L+ G + V++ LF +
Sbjct: 709 IMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDG-KLFHALAAE 767
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
G+ T LV + ++ G+L++A + +G
Sbjct: 768 SGLDSDVSVATGLVKLYAKCGKLDEAMSLFRG 799
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 219/460 (47%), Gaps = 27/460 (5%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q++F+ N I+ R G + A +F +M ++V++W A+I+ Q G + LF++M
Sbjct: 58 QHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTM 117
Query: 108 PVKNIVSWN-----CMIAGCIDNDRIDDAFDYFQAMP-----ERNTATY----NAMISGF 153
+++ + N M+ C N R AM ER + T NAMI+ +
Sbjct: 118 LLESSAAPNSYTLVAMLNACA-NSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMY 176
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV--DKARALSDYM---SFKNVVSW 208
K G LE+A +F +P ++V+S+TAM + ++ D R + + NV+++
Sbjct: 177 AKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITF 236
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI---Q 265
+ G + R + A+I + K G E A +F+ + Q
Sbjct: 237 ITAL-GACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQ 295
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL-LNEGR 324
D VS+NAMI+ + G +A+ +F + M+P+ TL+++ A +A + R
Sbjct: 296 ELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAAR 355
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQH 383
H + +G+ +V + NA+I+MY++CG + FR+I +++SWNT++ A
Sbjct: 356 GFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDR 415
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
+ K + F M L G DP+ ++F+++L+AC ++ ++ + L++ S
Sbjct: 416 KSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSV 475
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGV-WGSLLAA 482
T LV + + G + +A + + MP + + V W +L A
Sbjct: 476 ATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA 515
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 179/391 (45%), Gaps = 22/391 (5%)
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLF 166
++ + ++ C+D++ + + + E++ N +I+ +++ G LEEA +F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK-----NVVSWTVMITGYVKNERF 221
+M RNV+S+TA++ + G +A AL M + N + M+ +
Sbjct: 84 SKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 222 CEARELFYRMPDYD------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
R + + + V AMI + K G LE+A +F I KD VS+ AM
Sbjct: 144 AIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAM 203
Query: 276 IAGYAQNG-VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
YAQ +ALR+F M+ + P+ T ++ AC++L+ +G H L+
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLR---DGTWLHSLLHEAS 260
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSP---NLVSWNTIIAAFAQHGHYEKALI 391
+ NA+I MY +CG + F+ + S +LVSWN +I+A + G + A+
Sbjct: 261 LGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMA 320
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F ++ L G P+ +T +++L+A +G + F + G + ++ +
Sbjct: 321 IFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMY 380
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ G AW + + + ++ D W ++L A
Sbjct: 381 AKCGFFSAAWAVFRRIRWKCDVISWNTMLGA 411
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 192/444 (43%), Gaps = 69/444 (15%)
Query: 3 CNSYFHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSR 62
C S T+L +L L F P +SN LI ++ +
Sbjct: 243 CTSLRDGTWLHSLLHEASL----------GFDPLASNALINMYG---------------K 277
Query: 63 AGKISAARQLFDQMTTK---DVITWNAIITGYWQNGFLQESKNLFQSMPVKN-------- 111
G A +F M ++ D+++WNA+I+ + G ++ +F+ + ++
Sbjct: 278 CGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTL 337
Query: 112 IVSWNCMIAGCID-------NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
I N + A +D + RI +++ R+ NA+IS + K G A
Sbjct: 338 ITILNALAASGVDFGAARGFHGRI------WESGYLRDVVIGNAIISMYAKCGFFSAAWA 391
Query: 165 LFEQMPRR-NVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNE 219
+F ++ + +VIS+ ML + K +M N VS+ ++ +E
Sbjct: 392 VFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSE 451
Query: 220 RFCEARE----LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER--IQPKDCVSFN 273
R+ + R DY ++ V T +++ + K G + A L+F+ + + V++N
Sbjct: 452 ALDFGRKIHSLILTRRRDYVESS-VATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWN 510
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
M+ YAQN ++EA M++ + PD + SV ++C Q E + + ++ +
Sbjct: 511 VMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ---EAQVLRMCILES 567
Query: 334 GFEANVSVC--NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
G+ S C A+I+M+ RC + + F ++ ++VSW +++A A++ +++
Sbjct: 568 GYR---SACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHN 624
Query: 392 FFSQMGLNGFDPDGITFLSLLSAC 415
F +M L G PD T + L C
Sbjct: 625 LFRRMQLEGVIPDKFTLATTLDTC 648
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 7/196 (3%)
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
SG +++D D ++ +C L +G+ +H L+ G E ++ + N +I MY R
Sbjct: 13 LSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVR 72
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL-NGFDPDGITFLS 410
CG + ++ F ++ N+VSW +I+A AQ G + +A F M L + P+ T ++
Sbjct: 73 CGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVA 132
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT----CLVDILSRAGQLEKAWQITQG 466
+L+AC ++ + + M+ G+ +S T ++++ ++ G LE A +
Sbjct: 133 MLNACANSRDLAIGRSI-HAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLA 191
Query: 467 MPFEADTGVWGSLLAA 482
+P E D W ++ A
Sbjct: 192 IP-EKDVVSWTAMAGA 206
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 122/303 (40%), Gaps = 60/303 (19%)
Query: 4 NSYFHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKIS 58
++ F + L+ ++ P + +T D+C T +I T+ + V NA ++
Sbjct: 623 HNLFRRMQLEGVI-PDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLN 681
Query: 59 ALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNI 112
S G A F+ M +D+++WN + Y Q G +E+ LF+ M P K
Sbjct: 682 MYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLT 741
Query: 113 VSWNCMIAG------------------CIDND---------------RIDDAFDYFQAMP 139
S ++G +D+D ++D+A F+
Sbjct: 742 FSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGAC 801
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARA 195
+ NA+I +HG EEA ++F +M R +V + +++ G V++
Sbjct: 802 DWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEE--G 859
Query: 196 LSDYMSFKNVVSWTVMITGYV-------KNERFCEARELFYRMPDYDKNVFVVTAMITGF 248
S +++ K + + Y + + A ++ +MP ++ N V T+++ G
Sbjct: 860 CSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMP-FEDNTLVWTSLL-GT 917
Query: 249 CKV 251
CK+
Sbjct: 918 CKL 920
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V + ++ GK+ A LF V+ NAII Q+GF +E+ +F M
Sbjct: 774 VSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ 833
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPE-----RNTATYNAMISGFLKHGRLE 160
+ ++ + +I+ C +++ F M E Y + + G+LE
Sbjct: 834 EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLE 893
Query: 161 EATRLFEQMP-RRNVISYTAMLDGFMKKGEVD 191
A ++ +MP N + +T++L +G+ +
Sbjct: 894 HAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAE 925
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 293/547 (53%), Gaps = 14/547 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ + + S+ G + A ++F ++ DV+ W+A+ITG Q G QE+ LF M K
Sbjct: 87 FLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRK 146
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEEA 162
++ + Y Q++ E + N +I ++K +E+
Sbjct: 147 GARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDG 206
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM---SFK-NVVSWTVMI--TGYV 216
++FE M +++S+ A+L GF + + M FK N+ ++ ++ +
Sbjct: 207 NKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSL 266
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
+ F + D + FV TA++ + K LE+A + F+R+ +D S+ +I
Sbjct: 267 LDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVII 326
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+GYAQ AE+A++ F M + ++P++ TL S + CS + L GRQ H + ++ G
Sbjct: 327 SGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHF 386
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
++ V +A++ +Y +CG + +E F+ + S ++VSWNTII+ ++QHG EKAL F M
Sbjct: 387 GDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMM 446
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G PD TF+ +LSAC G V E F+ M K+YGI PS EHY C+VDIL RAG+
Sbjct: 447 LSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGK 506
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
+ + M + +W ++L AC ++ NV+ GE AAKK+ E++P + Y++LSN+
Sbjct: 507 FNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNI 566
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
+A+ G W DV +R LM +G+ K+ SW+E+ +VH FL D SHP I +I+ +L +
Sbjct: 567 FASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKL 626
Query: 577 SVQMKSV 583
+ S+
Sbjct: 627 GQSLMSI 633
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 204/431 (47%), Gaps = 22/431 (5%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCID 124
A +LF M K+ ++WNA++ GY Q G ++ LF M + + ++ GC +
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 125 NDRIDDAFDYFQAMPERNTATYN-----AMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
+ + A+ R+ + +++ + K G + +A ++F ++ +V++++A
Sbjct: 64 TGSLREG-KVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122
Query: 180 MLDGFMKKGEVDKARALSDYMSFKN------VVSWTVMITGYVKNERFCEARELFYRMPD 233
M+ G ++G +A L M K +S V + + R+ ++
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ + V +I + K +E+ +FE + D VS+NA+++G+ + R+F
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ +P+ T +SV +CS+L G+Q H +I+N + + V A++ MY++
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ +AF ++ + ++ SW II+ +AQ EKA+ +F QM G P+ T S LS
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362
Query: 414 ACGHAGKVNESMDLFELMVKV--YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
C H + L + VK +G I + LVD+ + G +E A I +G+
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVG---SALVDLYGKCGCMEHAEAIFKGL-ISR 418
Query: 472 DTGVWGSLLAA 482
D W ++++
Sbjct: 419 DIVSWNTIISG 429
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 154/316 (48%), Gaps = 23/316 (7%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM-----SFKNVVSWTVMI- 212
+E A RLF MP +N +S+ A+L+G+ + G+ K L M F TV+
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 213 ---TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
TG ++ + A L + + F+ +++ + K G + +A +F +I+ D
Sbjct: 61 CANTGSLREGKVLHALAL---RSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDV 117
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V+++AMI G Q G +EA LF M + +P+ TL S+ + + + L G+ H
Sbjct: 118 VAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGC 177
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ + GFE++ V N +I MY + + D F + +P+LVSWN +++ F +
Sbjct: 178 ICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRG 237
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL-FELMVKVYGIIPSSEH----Y 444
F QM L GF P+ TF+S+L +C + +D F V + I SS+
Sbjct: 238 PRIFYQMLLEGFKPNMFTFISVLRSC------SSLLDPEFGKQVHAHIIKNSSDDDDFVG 291
Query: 445 TCLVDILSRAGQLEKA 460
T LVD+ ++A LE A
Sbjct: 292 TALVDMYAKARCLEDA 307
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 116/229 (50%), Gaps = 2/229 (0%)
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+E A LF + K+ VS+NA++ GYAQ G ++ L+LF M + + + TL +V
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C+ L EG+ H L +R+G E + + +++ MYS+CG + D+ F +I +P++V+W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+ +I Q GH ++A F M G P+ T SL+S + G + + + K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
YG + L+ + ++ +E ++ + M D W +LL+
Sbjct: 181 -YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMT-NPDLVSWNALLSG 227
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 98/224 (43%), Gaps = 43/224 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A + + G + A +F + ++D+++WN II+GY Q+G +++ F+ M
Sbjct: 389 IFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLS 448
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ I MP+ AT+ ++S G +EE + F+ M
Sbjct: 449 EGI-------------------------MPDE--ATFIGVLSACSFMGLVEEGKKRFDSM 481
Query: 170 PR-----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM---ITGYVK---N 218
+ ++ Y M+D + G+ ++ + + M N+ ++++ + G K N
Sbjct: 482 SKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEM---NLTPYSLIWETVLGACKLHGN 538
Query: 219 ERFCE--ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
F E A++LF P D + +++ + + + N R L
Sbjct: 539 VDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRAL 582
>gi|449527015|ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/581 (31%), Positives = 309/581 (53%), Gaps = 47/581 (8%)
Query: 39 NCLIRLFSTQYVF--VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
+CL+ L S +F V +A + + IS A+Q+FD++ K+ + W+ ++ GY +
Sbjct: 126 HCLV-LKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNL 184
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDR-IDDAFDYFQAMP-----ERNTATYNAMI 150
+ ++ +LF +P +++V+W MI+ ++ + F +M E N T+++++
Sbjct: 185 MDDALDLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVV 244
Query: 151 S----------GFLKHGRL-------------------------EEATRLFEQMPRRNVI 175
G + HG L + A +++ M R +
Sbjct: 245 RACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDSAKAVYDSMERPCLK 304
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
+ ++L+G + G ++ A + + KN VS+ +M+ GY + R ++ LF RM
Sbjct: 305 ASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERMTH-- 362
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPK-DCVSFNAMIAGYAQNGVAEEALRLFSG 294
K + MI+ + + G ++ A LFE ++ + D V++N+MI+GY QN E AL+L+
Sbjct: 363 KTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGYIQNHQHEGALKLYIT 422
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + ++ +T ++F AC+ L+ + G+ HV IR F++NV V ++I MY++CG
Sbjct: 423 MCRTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGS 482
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I D++ +F + PN+ ++ +I + HG +A F +M + P+G T L +LSA
Sbjct: 483 IYDAQTSFASVCLPNVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSA 542
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C AG V E M +F M K YG+IP+ EHY C+VD+L R+G+L +A + MP EAD
Sbjct: 543 CSCAGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIEADRV 602
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+WG+LL AC +++ELGE AKK+ LDP+ + Y++LSN+YA G W + VR +
Sbjct: 603 IWGALLNACWFWMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRKLM 662
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
V K SWI++ NK F GD SHP + I+ L+
Sbjct: 663 SLKVKKIRGCSWIDVNNKTCVFSAGDRSHPNCNAIYSTLEH 703
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 198/415 (47%), Gaps = 31/415 (7%)
Query: 90 GYWQNGFLQESKNLFQSM------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT 143
G W++ + LF ++ NI+S N I+ + + +D A F MP R+
Sbjct: 9 GTWKHNRWKACLELFSTLCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSV 68
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARAL--- 196
++N MISG+ K G+ EA L +M NV +++++L G + +
Sbjct: 69 VSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCL 128
Query: 197 ---SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
S F+ V S ++ Y A+++F + +DKN + ++ G+ K +
Sbjct: 129 VLKSGLQIFERVGS--ALVYFYANINDISGAKQVFDEL--HDKNDLLWDLLLVGYVKCNL 184
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQN-GVAEEALRLFSGM-IKMDMQPDDATLVSVF 311
+++A LF +I +D V++ MI+ YA++ + L LF M + +++P++ T SV
Sbjct: 185 MDDALDLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVV 244
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
AC ++ L+ G+ H ++ + GF + SVC+A+I Y +C I ++ + + P L
Sbjct: 245 RACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDSAKAVYDSMERPCLK 304
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ N+++ G A F ++ + + +++ +L +G++ S LFE M
Sbjct: 305 ASNSLLEGLIFAGRINDAEEIFCKLR----EKNPVSYNLMLKGYATSGRIEGSKRLFERM 360
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
++ ++ + SR G+++KA+++ + + E D W S+++ + N
Sbjct: 361 TH-----KTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGYIQN 410
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 184/403 (45%), Gaps = 45/403 (11%)
Query: 25 STPDSCGNFTPHSSNCLIRLFSTQYVF-----VNNAKISALSRAGKISAARQLFDQMTTK 79
S +CG S ++ T+Y F V +A I + I +A+ ++D M
Sbjct: 242 SVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDSAKAVYDSMERP 301
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
+ N+++ G G + +++ +F + KN VS+N M+ G + RI+ + F+ M
Sbjct: 302 CLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERMT 361
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRR-NVISYTAMLDGFMKKGEVDKARALSD 198
+ T++ N MIS + ++G +++A +LFE + + +++ +M+ G+++ + + A L
Sbjct: 362 HKTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGYIQNHQHEGALKLYI 421
Query: 199 YMSFKNV----VSWTVMITGYVKNE--RFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
M +V +++ + E + +A + +D NV+V T++I + K G
Sbjct: 422 TMCRTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCG 481
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ +A+ F + + +F A+I GY +G+ EA +F M+K + P+ ATL+ + +
Sbjct: 482 SIYDAQTSFASVCLPNVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILS 541
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
ACS ++ EG V +C G++ P L
Sbjct: 542 ACSCAGMVKEGM-------------------TVFHSMEKCYGVI-----------PTLEH 571
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ ++ + G +A F M + + D + + +LL+AC
Sbjct: 572 YACVVDLLGRSGRLYEAEAFIRCMPI---EADRVIWGALLNAC 611
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/571 (32%), Positives = 297/571 (52%), Gaps = 69/571 (12%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA-GCIDNDR 127
A +F+ + +++ WN + G+ S PV + + CMI+ G + N
Sbjct: 87 AISVFETIQEPNLLIWNTMFRGH-----------ALSSDPVSALKLYVCMISLGLLPNSY 135
Query: 128 I----------DDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEEATRLFEQM 169
AF Q + + + + ++IS ++++GRLE+A ++F++
Sbjct: 136 TFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRS 195
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P R+V+SYTA++ G+ +G ++ A+ L D + K+VVSW MI+GY + + EA ELF
Sbjct: 196 PHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 230 RM------PD-------------------------------YDKNVFVVTAMITGFCKVG 252
M PD + N+ +V +++ + K G
Sbjct: 256 EMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCG 315
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
LE A LFE + KD +S+N +I GY + +EAL LF M++ +P+D T++S+
Sbjct: 316 ELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILP 375
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEAN--VSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
AC+ L ++ GR HV + + A S+ ++I MY++CG I + F I +L
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
SWN +I FA HG + A FS+M G +PD ITF+ LLSAC +G ++ +F
Sbjct: 436 SSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRT 495
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M + Y I P EHY C++D+L +G ++A ++ M E D +W SLL AC I NVE
Sbjct: 496 MTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVE 555
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
LGE A+ + +++P+N YV+LSN+YA AG W +V ++R L+ ++G+ K S IEI
Sbjct: 556 LGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEID 615
Query: 551 NKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+ VH F+ GD HP +I+ L+ V ++
Sbjct: 616 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 646
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 240/537 (44%), Gaps = 91/537 (16%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV+ + IS + G++ AR++FD+ +DV+++ A+I GY G+++ ++ LF +PV
Sbjct: 169 LFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPV 228
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN----TATYNAMISGFLKHGRLEEATRL 165
K++VSWN MI+G + +A + F+ M + N +T ++S + G +E ++
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 166 FEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ +++D + K GE++ A L + + +K+V+SW +I GY +
Sbjct: 289 HSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLY 348
Query: 222 CEARELFYRM------PD--------------------------YDKNV-------FVVT 242
EA LF M P+ DK + + T
Sbjct: 349 KEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRT 408
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A +F I K S+NAMI G+A +G A+ A +FS M K+ ++P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEP 468
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD T V + +ACS +L+ GR + R TM D ++
Sbjct: 469 DDITFVGLLSACSRSGMLDLGRH----IFR--------------TMTQ------DYKI-- 502
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+P L + +I G +++A + M + +PDG+ + SLL AC G V
Sbjct: 503 ----TPKLEHYGCMIDLLGHSGLFKEAEEMINNMEM---EPDGVIWCSLLKACKIRGNVE 555
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ ++K+ P Y L +I + AG+ + +I + + V G
Sbjct: 556 LGESFAQNLIKIEPENPGC--YVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPG----C 609
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSN---LYAAAGMWRDVTRVRLLMKEQ 536
I ++ + E + P+N +Y ML L AG D + V M+E+
Sbjct: 610 SSIEIDSVVHEFIIGD--KFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEE 664
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 172/345 (49%), Gaps = 42/345 (12%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS------FKNVVSWTVMI 212
L A +FE + N++ + M G D AL Y+ N ++ ++
Sbjct: 84 LPYAISVFETIQEPNLLIWNTMFRGHALSS--DPVSALKLYVCMISLGLLPNSYTFPFLL 141
Query: 213 TGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
K++ F E +++ + YD ++FV T++I+ + + G LE+AR +F+R +D V
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVV 201
Query: 271 SFNAMIAGYAQNGVAE-------------------------------EALRLFSGMIKMD 299
S+ A+I GYA G E EAL LF M+K +
Sbjct: 202 SYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTN 261
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++PD++T+V+V +AC+ + GRQ H + +GF +N+ + N+++ +YS+CG + +
Sbjct: 262 IRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETAC 321
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + +++SWNT+I + Y++AL+ F +M +G P+ +T LS+L AC H G
Sbjct: 322 GLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLG 381
Query: 420 KVNESMDLFELMVK-VYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
++ + + K + +S T L+D+ ++ G +E A Q+
Sbjct: 382 AIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQV 426
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 298/558 (53%), Gaps = 36/558 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ----------- 98
VF ++ ++ +I A ++FD+M +D+++WN II G+ QNGF +
Sbjct: 182 VFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQD 241
Query: 99 -----ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
+S L +P V M+ I I F N +T A+ +
Sbjct: 242 EGQRPDSITLVTVLPAAADVGL-LMVGKSIHGYAIRAGFAKLV-----NIST--ALADMY 293
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
K G +E A +F+ M ++ V+S+ +M+DG+++ GE +KA A+ + M + + V I
Sbjct: 294 SKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIM 353
Query: 214 ---------GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
G ++ +F F + ++ V+ ++I+ + K ++ A +F +
Sbjct: 354 EALHACADLGDLERGKFVHK---FVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ VS+NAMI GYAQNG EAL FS M + M+PD T+VSV A + L + +
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H L+IR+ + N+ V A++ MYS+CG I + F I ++++WN +I + HG
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
AL F +M +P+ IT+LS++SAC H+G V+E + F+ M + YG+ PS +HY
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHY 590
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
+VD+L RAG++++AW + MP V+G++L AC I+ N+E+GE AAKK+ EL+P
Sbjct: 591 GAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNP 650
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
+V+L+N+YA+ W V VR M+++G+ K S +E+ N+VH F G +HP
Sbjct: 651 DEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHP 710
Query: 565 CIDKIHLELKRASVQMKS 582
+I+ L+ ++K+
Sbjct: 711 QSKRIYAFLEELVYEIKA 728
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 149/279 (53%), Gaps = 6/279 (2%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV--- 205
++S F K+G + EA R+FE + + Y ML G+ K ++ A A M + +V
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 206 -VSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
++T ++ N +E+ ++ + NVF +T ++ + K +++A +F+
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
R+ +D VS+N +IAG++QNG A++AL L M +PD TLV+V A + + LL
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+ H IR GF V++ A+ MYS+CG + + L F + +VSWN+++ + Q
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
+G EKA+ F +M G DP G+T + L AC G +
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDL 365
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 146/303 (48%), Gaps = 9/303 (2%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y++++F T +++ F K G + A +FE I K ++ M+ GYA+N E AL
Sbjct: 78 YNEHLFQ-TKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLC 136
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M D++P + C L G++ H +I N F ANV V+ MY++C
Sbjct: 137 RMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCR 196
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I D+ F ++ +LVSWNTIIA F+Q+G +KAL +M G PD IT +++L
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLP 256
Query: 414 ACGHAG--KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
A G V +S+ + + ++ S T L D+ S+ G +E A I GM +
Sbjct: 257 AAADVGLLMVGKSIHGYAIRAGFAKLVNIS---TALADMYSKCGSVETARLIFDGMD-QK 312
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
W S++ V N E +KM E + V +M + L+A A + D+ R +
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEA-LHACADLG-DLERGKF 370
Query: 532 LMK 534
+ K
Sbjct: 371 VHK 373
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 107/332 (32%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR + V ++ A S+ G + AR +FD M K V++WN+++ GY QNG +++
Sbjct: 275 IRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAI 334
Query: 102 NLFQSM------PV---------------------------------KNIVSWNCMIAGC 122
+F+ M P +I N +I+
Sbjct: 335 AVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMY 394
Query: 123 IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR----------- 171
R+D A D F + R ++NAMI G+ ++GR+ EA F +M
Sbjct: 395 SKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMV 454
Query: 172 ----------------------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
+N+ TA++D + K G + AR L D +S +
Sbjct: 455 SVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR 514
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+V++W MI GY + A +LF +M K G +E
Sbjct: 515 HVITWNAMIDGYGTHGLGRAALDLFDKM------------------KKGAVE-------- 548
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
P D +++ ++I+ + +G+ +E LR F M
Sbjct: 549 --PND-ITYLSVISACSHSGLVDEGLRHFKSM 577
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR + +FV A + S+ G I AR+LFD ++ + VITWNA+I GY +G + +
Sbjct: 476 IIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAA 535
Query: 101 KNLFQSMPV----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
+LF M N +++ +I+ C + +D+ +F++M E + Y AM+
Sbjct: 536 LDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVD 595
Query: 152 GFLKHGRLEEATRLFEQMP-RRNVISYTAML 181
+ GR++EA E MP + Y AML
Sbjct: 596 LLGRAGRIKEAWDFIENMPISPGITVYGAML 626
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 114/296 (38%), Gaps = 55/296 (18%)
Query: 9 QTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRA 63
+ L+ + P + I+ +C + + F Q + V N+ IS S+
Sbjct: 338 EKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKC 397
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP--------------- 108
++ A +F+ + + ++WNA+I GY QNG + E+ N F M
Sbjct: 398 KRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI 457
Query: 109 -------VKNIVSW--NCMIAGCIDND---------------RIDDAFDYFQAMPERNTA 144
V W +I C+D + I A F + +R+
Sbjct: 458 PALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVI 517
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFMKKGEVDKA-----RA 195
T+NAMI G+ HG A LF++M + N I+Y +++ G VD+
Sbjct: 518 TWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSM 577
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
DY ++ + M+ + R EA + MP + V AM+ G CK+
Sbjct: 578 KQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP-ISPGITVYGAML-GACKI 631
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 5/169 (2%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C++++ L+ Q LVI+NG +++++S+ G I ++ F I +
Sbjct: 59 CTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALY 115
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+T++ +A++ E AL F +M + P F LL CG + ++ ++
Sbjct: 116 HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI- 174
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ T +V++ ++ Q++ A+++ MP E D W +++A
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERDLVSWNTIIAG 222
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 283/527 (53%), Gaps = 43/527 (8%)
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
+ DV NA + + G + ++ LF PV+++VSWN +I G + + +A + F
Sbjct: 153 SADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWR 212
Query: 138 MPERNTA------TYNAMISGFLKHGRLEEATRLFE----QMPRRNVISYTAMLDGFMKK 187
+ E A T +SG + G LE RL E + R V A++D ++K
Sbjct: 213 LAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKC 272
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
G ++ A ++ + +S + VSWT MI G+
Sbjct: 273 GSLELANSVFERISNRTAVSWTTMIVGHA------------------------------- 301
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
++GM+E+AR+LF+ + +D +NA++AGY QN +EA+ LF M K + P++ T+
Sbjct: 302 --RLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITM 359
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
V++ +ACS L L G H + R+ +V++ +++ MY++CG I + F +I
Sbjct: 360 VNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPV 419
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N ++W ++I A HGH ++A+ +F +M G PD ITF+ +LSAC HAG V
Sbjct: 420 QNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQF 479
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
F LM Y + +HY+C++D+L RAG L++A Q+ MP + D VWG+L AC ++
Sbjct: 480 FSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHG 539
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
N+ LGE AA K+ ELDP +S +YV+L+N+YA A M + +VR++M+ GV K S I
Sbjct: 540 NITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCI 599
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSWS 594
E+ VH F+ D SH + I+ L ++QM+ + + ++I+ S S
Sbjct: 600 ELNGVVHEFIVKDKSHLDTNAIYDCLHEITLQMRHIANLIDISESGS 646
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 199/440 (45%), Gaps = 57/440 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
VFV NA + S G ++ AR+LFD+ +DV++WN +I GY ++G +E+ LF +
Sbjct: 156 VFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAE 215
Query: 109 -----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT----YNAMISGFLKHGRL 159
+ V+ ++GC ++ + + + NA++ ++K G L
Sbjct: 216 DGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSL 275
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
E A +FE++ R +S+T M+ G + G ++ AR L D M ++V W ++ GYV+N+
Sbjct: 276 ELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNK 335
Query: 220 RFCEARELFYRM--PDYDKN-----------------------------------VFVVT 242
+ EA LF+ M D N V + T
Sbjct: 336 QGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGT 395
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
+++ + K G ++ A +F I ++ +++ +MI G A +G A+EA+ F MI + +QP
Sbjct: 396 SLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQP 455
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLV-IRNGFEANVSVCNAVITMYSRCGGILDSE-L 360
D+ T + V +AC L+ GRQ L+ + E + + +I + R G + ++E L
Sbjct: 456 DEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQL 515
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHY---EKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
P+ V W + A HG+ EKA M L DP LL+
Sbjct: 516 VNAMPMDPDAVVWGALFFACRMHGNITLGEKA-----AMKLVELDPSDSGIYVLLANMYA 570
Query: 418 AGKVNESMDLFELMVKVYGI 437
+ + D +M++ G+
Sbjct: 571 EANMRKKADKVRVMMRHLGV 590
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 134/280 (47%), Gaps = 35/280 (12%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ +VFVV A + + G + AR LF+ +D VS+N +I GY ++G+ EAL LF
Sbjct: 152 FSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFW 211
Query: 294 GMIK--MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+ + ++PD+ T++ + C+ + L G++ H V G V + NAV+ MY +
Sbjct: 212 RLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVK 271
Query: 352 CGGI-------------------------------LDSELAFRQIHSPNLVSWNTIIAAF 380
CG + D+ + F ++ ++ WN ++A +
Sbjct: 272 CGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGY 331
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
Q+ ++A+ F +M + DP+ IT ++LLSAC G + M + + + + + S
Sbjct: 332 VQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR-HKLHLS 390
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
T LVD+ ++ G ++KA + +P + + W S++
Sbjct: 391 VALGTSLVDMYAKCGNIKKAICVFNEIPVQ-NALTWTSMI 429
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 135/292 (46%), Gaps = 30/292 (10%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C +RL NA + + G + A +F++++ + ++W +I G+ + G +++
Sbjct: 257 CTVRLM--------NAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMED 308
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLK 155
++ LF MP +++ WN ++AG + N + +A F M + N T ++S +
Sbjct: 309 ARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQ 368
Query: 156 HGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
G LE + + R +V T+++D + K G + KA + + + +N ++WT M
Sbjct: 369 LGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSM 428
Query: 212 ITGYVKNERFCEARELFYRMPDY----DKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
I G + EA E F RM D D+ F+ +++ C G++E R F + K
Sbjct: 429 ICGLANHGHADEAIEYFQRMIDLGLQPDEITFI--GVLSACCHAGLVEAGRQFFSLMHAK 486
Query: 268 -----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
++ MI + G +EA +L + M M PD ++F AC
Sbjct: 487 YHLERKMKHYSCMIDLLGRAGHLDEAEQLVNA---MPMDPDAVVWGALFFAC 535
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 34/249 (13%)
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+F A+ Q+ V L L+ ++ +PD T + AC+ LQ + G
Sbjct: 87 AFRALSLCPHQHLVDRHCLPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGH 146
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
V + GF A+V V NA + +S G + + F + ++VSWNT+I + + G +A
Sbjct: 147 VQKLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREA 206
Query: 390 LIFFSQMGLNG--FDPDGITFLSLLSACGHAGKV----------------------NESM 425
L F ++ +G PD +T + +S C G + N M
Sbjct: 207 LELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVM 266
Query: 426 DLF------ELMVKVYGIIP--SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
D++ EL V+ I ++ +T ++ +R G +E A + MP E D W
Sbjct: 267 DMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMP-ERDVFPWN 325
Query: 478 SLLAACVIN 486
+L+A V N
Sbjct: 326 ALMAGYVQN 334
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/544 (32%), Positives = 293/544 (53%), Gaps = 13/544 (2%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
++ + I SR G + AA ++F +M DV+ + ++++ +NG L + ++ M +
Sbjct: 172 WIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQ 231
Query: 111 ----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
N + M+A C + M ++ A+I + ++G A +F
Sbjct: 232 GLQPNEHTMTSMLAECPRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVF 291
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKA-RALSDYMSF---KNVVSWTVMITGYVKNERFC 222
E + +NV+S+ +M+ ++ G +D A R S+ +S N ++++ ++ C
Sbjct: 292 ENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGS---VC 348
Query: 223 EARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
R++ D ++ V A+++ + + G + + +I+ D VS+ A I+
Sbjct: 349 LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANF 408
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
QNG +E+A+ L M P+D S ++C+ L LL++GRQ H L ++ G + V
Sbjct: 409 QNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVC 468
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
NA+I MYS+CG I + LAF + + +++SWN++I AQHG AL FS+M +
Sbjct: 469 TGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSD 528
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+ PD TFLS+L C HAG V E F M YG+ P+ HY C++D+L R G+ +A
Sbjct: 529 WRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEA 588
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
++ + MPFE D +W +LLA+C ++ N+++G+LAA K+ EL ++SA YV++SNLYA
Sbjct: 589 LRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMH 648
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
WRD RVR M E GV K +SWIE+ N+V+ F+ GDMSHP I+ L V M
Sbjct: 649 EEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVNTFVAGDMSHPDSTSIYQMLAELLVVM 708
Query: 581 KSVD 584
+ D
Sbjct: 709 QDTD 712
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 190/413 (46%), Gaps = 52/413 (12%)
Query: 67 SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND 126
+AA + DV+ + G ++G L ++ +LF MP KN+V+W I+GC N
Sbjct: 56 AAAVNVSHAAPPPDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNG 115
Query: 127 RIDDAFDYFQAMPERNTATYN-------------------------AMISGFL------- 154
R + A F M E A + A+ +GF
Sbjct: 116 RPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGS 175
Query: 155 -------KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
+ G L A +F +M +V+ YT+++ + GE+ +A + M+ + +
Sbjct: 176 CLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQP 235
Query: 208 WTVMITGYVKNERFCEARELFYRMPDY------DKNVFVVTAMITGFCKVGMLENARLLF 261
+T + C R + ++ Y ++V+ TA+I + + G A+ +F
Sbjct: 236 NEHTMTSMLAE---C-PRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVF 291
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
E ++ K+ VS+ +M+ ++G ++ALR+FS MI +QP++ +AC ++ L
Sbjct: 292 ENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVCL-- 349
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
GRQ H I+ ++ V NA+++MY R G + + E +I +P+LVSW I+A
Sbjct: 350 -GRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANF 408
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
Q+G EKA+ QM GF P+ F S LS+C +++ L L +K+
Sbjct: 409 QNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKL 461
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 128/248 (51%), Gaps = 6/248 (2%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+V + + G K G L +A LF+R+ K+ V++ I+G +NG E A +F+ M+
Sbjct: 69 DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ + P+D + AC+A L G Q H L +R GF A+ + + +I +YSRCG +
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLR 188
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+E FR++ +P++V + ++++A ++G +A+ QM G P+ T S+L+ C
Sbjct: 189 AAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP 248
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
+ E + + M+KV G S T L+D SR G A + + + + + W
Sbjct: 249 RG--IGEQIHGY--MLKVMG-SQSVYASTALIDFYSRYGDFGTAKTVFENLESK-NVVSW 302
Query: 477 GSLLAACV 484
S++ C+
Sbjct: 303 CSMMQLCI 310
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 39 NCL-IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CL ++L V NA I+ S+ G+I +AR FD M T DV++WN++I G Q+G
Sbjct: 455 HCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDA 514
Query: 98 QESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNA 148
+ F M + ++ ++ GC + + +F+ M +R T Y
Sbjct: 515 NLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYAC 574
Query: 149 MISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDY---MSFKN 204
MI ++GR EA R+ E MP +V+ + +L +D + +D +S ++
Sbjct: 575 MIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERD 634
Query: 205 VVSWTVMITGYVKNERFCEARELFYRM 231
S+ +M Y +E + +A + RM
Sbjct: 635 SASYVLMSNLYAMHEEWRDAERVRRRM 661
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 291/557 (52%), Gaps = 50/557 (8%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
+DV NA++ Y + ++ ++ +F M +++VSW+ MI N D A + + M
Sbjct: 127 RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM 186
Query: 139 P----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN------VISYTAMLDGFMKKG 188
+ +M++ F + + + R + V + TA+LD + K G
Sbjct: 187 NFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCG 246
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------------- 235
+ AR L + ++ K VVSWT MI G +++ R E +LF RM + +
Sbjct: 247 HLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIV 306
Query: 236 -------------------KNVFVV-----TAMITGFCKVGMLENARLLFERIQPKDCVS 271
+N F V TA++ + K + NAR LF+ Q +D +
Sbjct: 307 ECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMI 366
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ AM++ YAQ ++A LF M ++P T+VS+ + C+ L+ G+ H +
Sbjct: 367 WTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYID 426
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ E + + A++ MY++CG I + F + S ++ WN II FA HG+ E+AL
Sbjct: 427 KERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALD 486
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F++M G P+ ITF+ LL AC HAG V E LFE MV +G++P EHY C+VD+L
Sbjct: 487 IFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLL 546
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
RAG L++A ++ + MP + +T VWG+L+AAC ++ N +LGELAA ++ E++P+N V
Sbjct: 547 GRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNV 606
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH- 570
++SN+YAAA W D VR MK G+ K+ +S IE+ VH FL GD SHP I +I+
Sbjct: 607 LMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINE 666
Query: 571 --LELKRASVQMKSVDD 585
E++R + V D
Sbjct: 667 MLAEMRRKLNEAGYVPD 683
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 149/291 (51%), Gaps = 8/291 (2%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+R+ NA++ + + +E A +F++M R+V+S++ M+ + E D A L
Sbjct: 126 DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIRE 185
Query: 200 MSFKNVVSWTVMITGYVK------NERFCEARELFYRMPDYDKNVFV--VTAMITGFCKV 251
M+F V V + V N R +A + ++++ V TA++ + K
Sbjct: 186 MNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKC 245
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G L AR LF + K VS+ AMIAG ++ EE +LF M + ++ P++ T++S+
Sbjct: 246 GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLI 305
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
C L G+Q H ++RNGF ++++ A++ MY +C I ++ F + +++
Sbjct: 306 VECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVM 365
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
W +++A+AQ ++A F QM +G P +T +SLLS C AG ++
Sbjct: 366 IWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALD 416
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D++VFV A++ + + +E ARL+F+++ +D VS++ MI ++N + AL L
Sbjct: 126 DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIRE 185
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV--CNAVITMYSRC 352
M M ++P + +VS+ + + G+ H VIRN ++ V A++ MY++C
Sbjct: 186 MNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKC 245
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + + F + +VSW +IA + E+ F +M P+ IT LSL+
Sbjct: 246 GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLI 305
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
CG G + L +++ G S T LVD+ + + A + D
Sbjct: 306 VECGFTGALQLGKQLHAYILR-NGFSVSLALATALVDMYGKCSDIRNARALFDSTQ-NRD 363
Query: 473 TGVWGSLLAA 482
+W ++L+A
Sbjct: 364 VMIWTAMLSA 373
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
SV AC + G++ H V++ G + +V V NA++ MY C + + L F ++
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
++VSW+T+I + +++ ++ AL +M P + +S+++ + +
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 429 ELMVK----VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+++ + +P++ T L+D+ ++ G L A Q+ G+ + W +++A C+
Sbjct: 219 AYVIRNSNNEHMGVPTT---TALLDMYAKCGHLGLARQLFNGLT-QKTVVSWTAMIAGCI 274
Query: 485 INLNVELGELAAKKMRE 501
+ +E G +M+E
Sbjct: 275 RSNRLEEGTKLFIRMQE 291
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 298/580 (51%), Gaps = 70/580 (12%)
Query: 44 LFSTQYVFVNNAKISALS-RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
L +T Y + S LS ++ A +FD + +++ WN + G+
Sbjct: 30 LHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH----------- 78
Query: 103 LFQSMPVKNIVSWNCMIA-GCIDNDRI----------DDAFDYFQAMP--------ERNT 143
S PV + + CMI+ G + N AF Q + + +
Sbjct: 79 ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDL 138
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
+ ++I+ ++K+GR E+A ++F+Q R+V+SYTA++ G+ G + A+ + D + K
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVK 198
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRM------PD------------------------ 233
+VVSW +I+GY + + EA ELF M PD
Sbjct: 199 DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVH 258
Query: 234 -------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+ N+ +V A+I + K G +E A LFE + KD +S+N +I GY + +
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYK 318
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR--NGFEANVSVCNA 344
EAL LF M++ P++ T++S+ AC+ L ++ GR HV + + G S+ +
Sbjct: 319 EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+I MY++CG I ++ F + + +L SWN +I FA HG A FS+M +G +PD
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPD 438
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
ITF+ LLSAC H+G ++ +F M + Y I P EHY C++D+L +G ++A ++
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
M + D +W SLL AC ++ NVELGE A+ + +++P+NS YV+LSN+YA AG W
Sbjct: 499 NSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWN 558
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
+V + R L+ ++G+ K S IEI + VH F+ GD HP
Sbjct: 559 EVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHP 598
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/573 (30%), Positives = 313/573 (54%), Gaps = 39/573 (6%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q F NNA ++ ++ G++ ++ LF+ +D+++WN +I+ + Q+ E+ F+ M
Sbjct: 229 QKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLM 288
Query: 108 PVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN-----AMISGFLKHGR 158
++ + V+ ++ C +R+D + + N N A++ + +
Sbjct: 289 VLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQ 348
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS-----FKNVVSWTVMIT 213
+E R+F+ + R + + AM+ G+ + G +KA L M N + ++
Sbjct: 349 VESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMP 408
Query: 214 GYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
V E F + + + ++ +V A++ + ++G ++ + +F+ ++ +D VS
Sbjct: 409 ACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVS 468
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMD-----------------MQPDDATLVSVFTAC 314
+N MI GY +G AL L M +M+ +P+ TL++V C
Sbjct: 469 WNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGC 528
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+AL + +G++ H IRN ++++V +A++ MY++CG + S F ++ + N+++WN
Sbjct: 529 AALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWN 588
Query: 375 TIIAAFAQHGHYEKALIFFSQM----GLNG-FDPDGITFLSLLSACGHAGKVNESMDLFE 429
+I A HG E+AL F M G G P+ +TF+++ +AC H+G ++E ++LF
Sbjct: 589 VLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFY 648
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD-TGVWGSLLAACVINLN 488
M +G+ P+S+HY C+VD+L RAGQLE+A+++ MP E D G W SLL AC I+ N
Sbjct: 649 RMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQN 708
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
VELGE+AAK + L+P ++ YV+LSN+Y++AG+W VR M++ GV K+ SWIE
Sbjct: 709 VELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIE 768
Query: 549 IGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
++VH F+ GD+SHP +++H L+ S +M+
Sbjct: 769 FRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMR 801
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 223/475 (46%), Gaps = 39/475 (8%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+ + V V N ++ + G I ++FD++T +D ++WN+ I + +++ F
Sbjct: 123 YGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAF 182
Query: 105 QSMPVKNI---------VSWNCMIAGCIDNDRIDDAFD-YFQAMPERNTATYNAMISGFL 154
++M ++N+ V+ C G + R+ Y + ++ T T NA+++ +
Sbjct: 183 RAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFTNNALMAMYA 242
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTV 210
K GR++++ LFE R+++S+ M+ F + +A A M + V V+
Sbjct: 243 KLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIAS 302
Query: 211 MITGYVKNERFCEAREL---FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
++ ER +E+ R D +N FV +A++ +C +E+ R +F+ I +
Sbjct: 303 VLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 362
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQS 326
+NAMI+GYA+NG+ E+AL LF MIK+ + P+ T+ SV AC + +
Sbjct: 363 RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESI 422
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H ++ GF+ + V NA++ MYSR G + SE F + + VSWNT+I + G Y
Sbjct: 423 HGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRY 482
Query: 387 EKALIFFSQMGL-----------------NGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
AL+ +M + P+ IT +++L C + + ++
Sbjct: 483 SNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHA 542
Query: 430 LMVKVYGIIPSSEHY-TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
++ ++ S + LVD+ ++ G L + ++ MP + W L+ AC
Sbjct: 543 YAIR--NMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMAC 594
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 169/350 (48%), Gaps = 12/350 (3%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN-- 204
N +++ + K G + + ++F+++ R+ +S+ + + + + ++A M +N
Sbjct: 132 NTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENME 191
Query: 205 VVSWT-VMITGYVKNERFCEARELFYRMPDY-----DKNVFVVTAMITGFCKVGMLENAR 258
+ S+T V + N L ++ Y D+ F A++ + K+G +++++
Sbjct: 192 LSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSK 251
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
LFE +D VS+N MI+ ++Q+ EAL F M+ ++ D T+ SV ACS L+
Sbjct: 252 ALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLE 311
Query: 319 LLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
L+ G++ H V+RN N V +A++ MY C + F I + WN +I
Sbjct: 312 RLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMI 371
Query: 378 AAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
+ +A++G EKALI F +M + G P+ T S++ AC H + + VK+ G
Sbjct: 372 SGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKL-G 430
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
L+D+ SR G+++ + I M D W +++ V++
Sbjct: 431 FKEDRYVQNALMDMYSRMGKMDISETIFDSMEVR-DRVSWNTMITGYVLS 479
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF-EANVSVCNAV 345
EA+ + M +PD+ +V A S LQ L G Q H ++ G+ ++V+V N +
Sbjct: 75 EAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTL 134
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY +CGGI D F +I + VSWN+ IAA + +E+AL F M + +
Sbjct: 135 VNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSS 194
Query: 406 ITFLSLLSACGHAG 419
T +S+ AC + G
Sbjct: 195 FTLVSVALACSNLG 208
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR + V +A + ++ G ++ +R++F++M K+VITWN +I +G +E+
Sbjct: 545 IRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEAL 604
Query: 102 NLFQSMPVK---------NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYN 147
LF++M + N V++ + A C + I + + F M E + Y
Sbjct: 605 ELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYA 664
Query: 148 AMISGFLKHGRLEEATRLFEQMP 170
++ + G+LEEA L MP
Sbjct: 665 CVVDLLGRAGQLEEAYELVNTMP 687
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 281/555 (50%), Gaps = 46/555 (8%)
Query: 38 SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
S C ++ ++ A++S+LS + DV N++I Y+ G L
Sbjct: 125 SQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG--MAVKSAVGSDVFVANSLIHCYFSCGDL 182
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL--- 154
+ +F ++ K++VSWN MI G + D A + F+ M + + + G L
Sbjct: 183 DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 242
Query: 155 ------KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
+ GR + + + E N+ AMLD + K G ++ A+ L D M K+ V+W
Sbjct: 243 AKIRNLEFGR-QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
T M+ GY +E + ARE+ MP KD
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQ---------------------------------KD 328
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
V++NA+I+ Y QNG EAL +F + ++ +M+ + TLVS +AC+ + L GR H
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ ++G N V +A+I MYS+CG + S F + ++ W+ +I A HG
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+A+ F +M P+G+TF ++ AC H G V+E+ LF M YGI+P +HY C+
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
VD+L R+G LEKA + + MP T VWG+LL AC I+ N+ L E+A ++ EL+P+N
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 568
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
+V+LSN+YA G W +V+ +R M+ G+ K+ S IEI +H FL GD +HP +
Sbjct: 569 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 628
Query: 568 KIHLELKRASVQMKS 582
K++ +L ++KS
Sbjct: 629 KVYGKLHEVMEKLKS 643
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 18/281 (6%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y + A ++ F LE AR +F+ I + ++N +I YA ++ F
Sbjct: 63 YSASKLFAMAALSSFAS---LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFL 119
Query: 294 GMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M+ + P+ T + A + + L+ G+ H + +++ ++V V N++I Y C
Sbjct: 120 DMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC 179
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + + F I ++VSWN++I F Q G +KAL F +M +T + +L
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 413 SACGHAGKVNESMD----LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
SAC + + E V V + ++ ++D+ ++ G +E A ++ M
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANA-----MLDMYTKCGSIEDAKRLFDAME 294
Query: 469 FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
E D W ++L I+ + E AA+++ PQ V
Sbjct: 295 -EKDNVTWTTMLDGYAISEDYE----AAREVLNSMPQKDIV 330
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/464 (35%), Positives = 258/464 (55%), Gaps = 39/464 (8%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E + + ++IS + ++GRLE+A ++F++ R+V+SYTA++ G+ G + A+ + D
Sbjct: 98 EPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDE 157
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD-------------------- 233
+ K+VVSW MI+GY + + EA ELF M PD
Sbjct: 158 IPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELG 217
Query: 234 -----------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+ N+ +V A+I + K G +E A LFE + KD VS+N +I GY
Sbjct: 218 RQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHM 277
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN--VS 340
+ +EAL LF M++ P+D T+VS+ AC+ L ++ GR HV + + + S
Sbjct: 278 NLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPS 337
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
+ ++I MY++CG I + F + +L SWN +I FA HG FS+M NG
Sbjct: 338 LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNG 397
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+PD ITF+ LLSAC H+GK++ +F+ M + Y I P EHY C++D+L +G ++A
Sbjct: 398 IEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEA 457
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
++ + MP E D +W SLL AC + N+EL E A+ + +++P+N YV+LSN+YA A
Sbjct: 458 KEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATA 517
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
G W +V +VR L+ +G+ K S IEI ++VH F+ GD HP
Sbjct: 518 GEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHP 561
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 219/508 (43%), Gaps = 88/508 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ + IS ++ G++ A ++FD+ + +DV+++ A+ITGY +G ++ ++ +F +PV
Sbjct: 101 LYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPV 160
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K++VSWN MI+G + +A + F+ M + N + L + L Q+
Sbjct: 161 KDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQV 220
Query: 170 PR--------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
N+ A++D + K G+V+ A L + +S K+VVSW +I GY +
Sbjct: 221 HSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLY 280
Query: 222 CEARELFYRM------PD--------------------------YDKNVFVV-------T 242
EA LF M P+ DK + V T
Sbjct: 281 KEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRT 340
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A +F + K S+NAMI G+A +G A LFS M K ++P
Sbjct: 341 SLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEP 400
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD T V + +ACS L+ GR I S
Sbjct: 401 DDITFVGLLSACSHSGKLDLGRH-----------------------------IFKSMTQD 431
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
I +P L + +I G +++A M + +PDG+ + SLL AC G +
Sbjct: 432 YDI-TPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPM---EPDGVIWCSLLKACRRHGNLE 487
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ ++KV P S Y L +I + AG+ ++ ++ + + V G
Sbjct: 488 LAESFARNLMKVEPENPGS--YVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPG----C 541
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVY 510
I ++ E+ E +L P+N +Y
Sbjct: 542 SSIEIDSEVHEFIVGD--KLHPRNREIY 567
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 299/554 (53%), Gaps = 30/554 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
+FV +A + S+ G++ A ++F++ D + W +++TGY QN +E+ LF M
Sbjct: 139 MFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVM 198
Query: 108 -------PVK--NIVS-----WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
PV ++VS N C+ I FD + N++++ +
Sbjct: 199 MDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFD-------GDLPLVNSLLNLY 251
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
K G + A LF +MP ++VIS++ M+ + ++A L M K +V +
Sbjct: 252 AKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVV 311
Query: 214 GYVKN---ERFCEARELFYRMP---DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
++ R E + +++ ++ + V TA+I + K + A LF+R+ K
Sbjct: 312 SALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKK 371
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D VS+ A+++GYAQNG+A +++ +F M+ +QPD +V + A S L + + H
Sbjct: 372 DVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLH 431
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
V+R+GF +NV V ++I +YS+CG + D+ F+ + ++V W+++IAA+ HG
Sbjct: 432 GYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGG 491
Query: 388 KALIFFSQMGLNG-FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
+AL F QM N P+ +TFLS+LSAC HAG V E + +F+ MV Y + P SEH+
Sbjct: 492 EALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGI 551
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VD+L R GQL KA I MP A VWG+LL AC I+ N+E+GE AAK + LDP +
Sbjct: 552 MVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSH 611
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
+ Y++LSN+YA G W +V +R +KE+G+ K S +E+ VH FL D HP
Sbjct: 612 AGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDS 671
Query: 567 DKIHLELKRASVQM 580
KI+ L++ QM
Sbjct: 672 QKIYELLRKLEAQM 685
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 211/450 (46%), Gaps = 35/450 (7%)
Query: 58 SALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNC 117
S ++ + AAR++FD+ +V WN+ + Y + +E+ LF M C
Sbjct: 44 SLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMI--------C 95
Query: 118 MIAGCIDNDRIDDAF------------DYFQAMPERNTATYNAMISG------FLKHGRL 159
DN I A ++N + M G + K G++
Sbjct: 96 TAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQM 155
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW-------TVMI 212
EA ++FE+ R + + +T+M+ G+ + + ++A AL M + V V
Sbjct: 156 GEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSA 215
Query: 213 TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ N + ++D ++ +V +++ + K G + A LF ++ KD +S+
Sbjct: 216 CAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISW 275
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
+ MIA YA N A EAL LF MI+ +P+ T+VS AC+ + L EG++ H + +
Sbjct: 276 STMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVW 335
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
GFE + SV A+I MY +C ++ F+++ ++VSW +++ +AQ+G K++
Sbjct: 336 KGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGV 395
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F M +G PD + + +L+A G +++ L +V+ G + L+++ S
Sbjct: 396 FRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVR-SGFNSNVFVGASLIELYS 454
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ G L A ++ +GM D +W S++AA
Sbjct: 455 KCGSLGDAVKLFKGMIVR-DVVIWSSMIAA 483
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 7/229 (3%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF--NAMIAGYAQNGVAEEALRL 291
YD + A++ + ++ A ++FE I P C SF N MI G+A +G +L L
Sbjct: 750 YDSRILTKFAIM--YVSFNRIDAASIVFEDI-PNPC-SFLWNVMIRGFATDGRFLSSLEL 805
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+S M++ ++PD +C+ L L G+ H ++ G ++ V A++ MY++
Sbjct: 806 YSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAK 865
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG I + L F ++ +LVSW ++I+ +A +G+ + L FF M +G P+ ++ LS+
Sbjct: 866 CGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSV 925
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
L ACG+ G + + + F V G T ++D+ S+ G L+ A
Sbjct: 926 LLACGNLGALRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLA 973
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 139/342 (40%), Gaps = 78/342 (22%)
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM---------------- 169
+RID A F+ +P + +N MI GF GR + L+ +M
Sbjct: 766 NRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFAL 825
Query: 170 ---------PRRNVISY--------------TAMLDGFMKKGEVDKARALSDYMSFKNVV 206
R VI A++D + K G+++ AR + D M+ +++V
Sbjct: 826 KSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLV 885
Query: 207 SWTVMITGYVKNERFCEARELFYRM------PD--------------------------- 233
SWT MI+GY N E F M P+
Sbjct: 886 SWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYV 945
Query: 234 ----YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
++ ++ V TA++ + K G L+ AR LF+ KD V ++AMIA Y +G +A+
Sbjct: 946 IQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAI 1005
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA-NVSVCNAVITM 348
LF M+K ++P T V +ACS LL EG+ L+ A +S ++ +
Sbjct: 1006 DLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDL 1065
Query: 349 YSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
R G + ++ +L P+ W +++ A H + + A
Sbjct: 1066 LGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLA 1107
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 120/274 (43%), Gaps = 37/274 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV+ A + ++ G I AAR +FD+M +D+++W ++I+GY NG+ E+ F M
Sbjct: 853 LFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRS 912
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE--ATRLFE 167
++ P R + + G L R E + + +
Sbjct: 913 SGVI-------------------------PNRVSILSVLLACGNLGALRKGEWFHSYVIQ 947
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
+++ TA++D + K G +D AR L D + K++V W+ MI Y + +A +L
Sbjct: 948 TGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDL 1007
Query: 228 FYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLF-----ERIQPKDCVSFNAMIAGYA 280
F +M + T +++ G+LE ++ F E + + ++ M+
Sbjct: 1008 FDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLG 1067
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ G EA+ L M ++PD + S+ AC
Sbjct: 1068 RAGQLSEAVDLIE---NMPVEPDASIWGSLLGAC 1098
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 25/188 (13%)
Query: 306 TLVSVFTACSALQLLNEGR---QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
LV +F AC N GR Q H V + G + + ++Y++C + + F
Sbjct: 6 VLVDLFQAC------NNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSACGHAGKV 421
+ PN+ WN+ + ++ + +E+ L F M G PD T L AC
Sbjct: 60 DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACA----- 114
Query: 422 NESMDLFELMVKVYGIIPSSEHY-------TCLVDILSRAGQLEKAWQITQGMPFEADTG 474
+ + EL ++G ++ + LV++ S+ GQ+ +A ++ + DT
Sbjct: 115 --GLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTV 171
Query: 475 VWGSLLAA 482
+W S++
Sbjct: 172 LWTSMVTG 179
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 2/159 (1%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+++H + G + + + MY I + + F I +P WN +I FA
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G + +L +S+M G PD F L +C + + + +V G
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLV-CCGCSNDLFV 855
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
LVD+ ++ G +E A + M D W S+++
Sbjct: 856 DAALVDMYAKCGDIEAARLVFDKMAVR-DLVSWTSMISG 893
>gi|125589995|gb|EAZ30345.1| hypothetical protein OsJ_14392 [Oryza sativa Japonica Group]
Length = 704
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/531 (31%), Positives = 301/531 (56%), Gaps = 16/531 (3%)
Query: 57 ISALSRAGKISAARQLFDQMT-TKDVITWNAIITGYWQ--NGFLQESKNLFQSMPVKNIV 113
+ AL R +S A L +M ++D+ W AII+GY + N + +S LF + ++ V
Sbjct: 140 VVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGV 199
Query: 114 -----SWNCMIAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEEATR 164
+++ ++ C+ ++ Q+ E +A++ + + G +++A
Sbjct: 200 MPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVM 259
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
++ + ++I+ ++ GF+ G + A+ + M+ + S+ +MI Y R +
Sbjct: 260 VYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDC 319
Query: 225 RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNG 283
R +F MP +N+ + +M++ + G LE R LFE+I+ ++ V++N+MI+GY QN
Sbjct: 320 RRMFEMMPR--RNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQND 377
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+ EAL+LF+ M ++ ++ +T ++ AC+ + + +G+ H L+ + FE+N V
Sbjct: 378 QSSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGT 437
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
A++ MYS+CG + D+ AF I SPN+ SW ++I AQ+GH+ +A++ F++M N P
Sbjct: 438 ALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKP 497
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ ITFL +L A AG VN+ M F M + YG++P+ EHYTC VD+L RA ++ +A +
Sbjct: 498 NEITFLGILMASARAGLVNKGMRFFHSM-ESYGVVPTVEHYTCAVDLLGRARRVREAEKF 556
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW 523
MP AD VWG+LL AC +++E+GE A+K+ + ++ + YV +SN+YA G W
Sbjct: 557 ISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKW 616
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
DV +VR ++ K+ SWIE+ + VH FL D +HP ++I+L L+
Sbjct: 617 EDVVKVRTRLRSINAKKEPGCSWIEVKDMVHVFLVEDRNHPEREEIYLMLE 667
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 173/352 (49%), Gaps = 16/352 (4%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
CLI+ + +A + R+G + A +++ + +IT N +I G+ G ++
Sbjct: 228 CLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTED 287
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+K +F M + S+N MI D R++D F+ MP RN T N+M+S L++G+L
Sbjct: 288 AKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKL 347
Query: 160 EEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYM----------SFKNVVSW 208
EE +LFEQ+ RN +++ +M+ G+++ + +A L M +F ++
Sbjct: 348 EEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALLHA 407
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
I G ++ + A L + P ++ N +V TA++ + K G + +AR F I +
Sbjct: 408 CATI-GTIEQGKMVHA--LLCKTP-FESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPN 463
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
S+ ++I G AQNG EA+ F+ M+K +++P++ T + + A + L+N+G +
Sbjct: 464 VASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFH 523
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAA 379
+ G V + + R + ++E ++ P + V W ++ A
Sbjct: 524 SMESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTA 575
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 124/302 (41%), Gaps = 40/302 (13%)
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+S+NA +A +A+ G +AL + M + D+AT S AC+ + L G Q H
Sbjct: 33 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 92
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN-------------------- 369
V+++G + V +++ YS C + + F +H+ N
Sbjct: 93 VVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDA 152
Query: 370 ------------LVSWNTIIAAFAQHGHYE--KALIFFSQ-MGLNGFDPDGITFLSLLSA 414
L +W II+ +A+ + K+L F Q + +G P+ T+ S+L A
Sbjct: 153 LDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRA 212
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C G + + +++ G + LVD+ R+G ++ A + G+ +
Sbjct: 213 CVKMGALEFGRSIHGCLIQ-SGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLI- 270
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+L+A + E +L +M E D S Y ++ YA G D R+ +M
Sbjct: 271 TSNTLIAGFISMGRTEDAKLVFSQMTEHD---SGSYNLMIKAYADEGRLEDCRRMFEMMP 327
Query: 535 EQ 536
+
Sbjct: 328 RR 329
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/569 (32%), Positives = 298/569 (52%), Gaps = 30/569 (5%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+ T+ +FV NA + ++ G + ARQ+F+ M +D ++WN II GY Q+ E+
Sbjct: 454 IIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEA 513
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----------ERNTATYNAMI 150
+LF M IVS +A + + +Q +R T +++I
Sbjct: 514 FDLFMRMNSCGIVSDGACLASTLK--ACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLI 571
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----V 206
+ K G +E+A ++F MP +V+S A++ G+ + +++A L M K V +
Sbjct: 572 DMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTKGVNPSEI 630
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR-------L 259
++ ++ K E + ++ + F G +G+ N+R L
Sbjct: 631 TFATIVEACHKPESLTLGTQFHGQIIKWG---FSSEGEYLGISLLGLYMNSRRMAEACAL 687
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
E PK V + M++G++QNG EEAL+ + M PD AT V+V CS L
Sbjct: 688 FSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSS 747
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIA 378
L EGR H L+ + + N +I MY++CG + S F ++ N+VSWN++I
Sbjct: 748 LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLIN 807
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+A++G+ E AL F M + PD ITFL +L+AC HAGKV++ +FE+M+ YGI
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIE 867
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
+H C+VD+L R G L++A + + D +W SLL AC I+ + GE+AA++
Sbjct: 868 ARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAER 927
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ EL+PQNS+ YV+LSN+YA+ G W + +R M+++GV K YSWI++G + H F
Sbjct: 928 LIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAA 987
Query: 559 GDMSHPCIDKIHLELKRASVQMKSVDDFV 587
GD SH I KI + L+ MK DD V
Sbjct: 988 GDQSHSDIGKIEMFLEDLYDLMK--DDAV 1014
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 221/502 (44%), Gaps = 92/502 (18%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG----FLQESKNLFQSM 107
+ NA + ++ ++S A + F+ + KDV WN++++ Y G L+ +LF+++
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENL 155
Query: 108 PVKNIVSWNC--------------------------------------MIAGCIDNDRID 129
N +++ M A C DR+
Sbjct: 156 IFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKC---DRLG 212
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM----PRRNVISYTAMLDGFM 185
DA F + + NT + + SG++K G EEA +FE+M R + +++ +++ ++
Sbjct: 213 DAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYI 272
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE--ARELFYRMPDYD-------- 235
G++ AR L M +VV+W VMI+G+ K R CE A E F M
Sbjct: 273 SLGKLKDARLLFGEMPSPDVVAWNVMISGHGK--RGCEIVAIEYFLNMRKSSVKSTRSTL 330
Query: 236 -----------------------------KNVFVVTAMITGFCKVGMLENARLLFERIQP 266
N++V +++++ + K +E A +FE ++
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
++ V +NAMI GYA NG + + + LF M DD T S+ + C+ L G Q
Sbjct: 391 RNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQF 450
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H ++I+ N+ V NA++ MY++CG + D+ F + + VSWNTII + Q +
Sbjct: 451 HSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENE 510
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
+A F +M G DG S L AC + + + + L VK G+ +
Sbjct: 511 SEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKC-GLDRVLHTGSS 569
Query: 447 LVDILSRAGQLEKAWQITQGMP 468
L+D+ S+ G +E A ++ MP
Sbjct: 570 LIDMYSKCGIIEDARKVFSSMP 591
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 224/458 (48%), Gaps = 24/458 (5%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+L ++V ++ +S S+ K+ AA ++F+ + ++ + WNA+I GY NG +
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVM 413
Query: 102 NLFQSMPVK--NI--VSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGF 153
LF M NI ++ +++ C + ++ + + + +N NA++ +
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMY 473
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
K G LE+A ++FE M R+ +S+ ++ G+++ +A L M+ +VS +
Sbjct: 474 AKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLA 533
Query: 214 GYVKNERFCEARELFYRMPD---------YDKNVFVVTAMITGFCKVGMLENARLLFERI 264
+K C Y+ D+ + +++I + K G++E+AR +F +
Sbjct: 534 STLKA---CTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSM 590
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
VS NA+IAGY+QN + EEA+ LF M+ + P + T ++ AC + L G
Sbjct: 591 PEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGT 649
Query: 325 QSHVLVIRNGFEANVSVCN-AVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFAQ 382
Q H +I+ GF + +++ +Y + ++ F ++ SP ++V W +++ +Q
Sbjct: 650 QFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQ 709
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+G YE+AL F+ +M +G PD TF+++L C + E + L+ + +
Sbjct: 710 NGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
T L+D+ ++ G ++ + Q+ M ++ W SL+
Sbjct: 770 SNT-LIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLI 806
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/424 (18%), Positives = 174/424 (41%), Gaps = 78/424 (18%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR----ALSDYMSF 202
NA++ + K ++ A + F + ++V ++ +ML + G+ K +L + + F
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIF 157
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLL 260
N +++++++ + R++ M ++N + A++ + K L +A+ +
Sbjct: 158 PNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRV 217
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ I + V + + +GY + G+ EEA+ +F M +PD V+V
Sbjct: 218 FDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV---------- 267
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
I Y G + D+ L F ++ SP++V+WN +I+
Sbjct: 268 -------------------------INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGH 302
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
+ G A+ +F M + T S+LSA G ++ + + +K+ G+ +
Sbjct: 303 GKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL-GLASN 361
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMP-------------------------------- 468
+ LV + S+ ++E A ++ + +
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 469 --FEADTGVWGSLLAACVINLNVELG-ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
+ D + SLL+ C ++ ++E+G + + +++ +N V L ++YA G D
Sbjct: 422 SGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALED 481
Query: 526 VTRV 529
++
Sbjct: 482 ARQI 485
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 7/217 (3%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L G+ H + G ++ + NA++ +Y++C + +E F + ++ +WN++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSM 134
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
++ G K L F + N P+ TF +LS V + M+K+ G+
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKM-GLER 193
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+S LVD+ ++ +L A ++ G+ + +T W L + V E + ++M
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGI-VDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252
Query: 500 R-ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
R E + +V + N Y + G +D RLL E
Sbjct: 253 RGEGHRPDHLAFVTVINTYISLGKLKD---ARLLFGE 286
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 197/630 (31%), Positives = 301/630 (47%), Gaps = 115/630 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A I + G I AR++FD++ +D I WN ++ GY ++G + F M
Sbjct: 180 LFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRT 239
Query: 110 K----NIVSWNCMIAGCIDNDR-----------------------------------IDD 130
N V++ C+++ C + + D
Sbjct: 240 SYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFD 299
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM----------------PR--- 171
A F MP+ +T T+N +I+G++++G +EA LF M P
Sbjct: 300 ARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILE 359
Query: 172 -------RNVISY-------------TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ V SY +A++D + K G+V+ AR + + +V T M
Sbjct: 360 SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAM 419
Query: 212 ITGYVKNERFCEARELFYRM-------------------------------------PDY 234
I+GYV + +A F +
Sbjct: 420 ISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQL 479
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ V V +A+ + K G L+ A F R+ D + +N+MI+ ++QNG E A+ LF
Sbjct: 480 ENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQ 539
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + D +L S ++ + L L G++ H VIRN F ++ V +A+I MYS+CG
Sbjct: 540 MGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGK 599
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F + N VSWN+IIAA+ HG + L F +M G PD +TFL ++SA
Sbjct: 600 LALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISA 659
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
CGHAG V E + F M + YGI EHY C+VD+ RAG+L +A+ + MPF D G
Sbjct: 660 CGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAG 719
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VWG+LL AC ++ NVEL +LA++ + ELDP+NS YV+LSN++A AG W V +VR LMK
Sbjct: 720 VWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMK 779
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
E+GV K YSWI++ H F + +HP
Sbjct: 780 EKGVQKIPGYSWIDVNGGTHMFSAAEGNHP 809
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 188/370 (50%), Gaps = 53/370 (14%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ +A+I Y NG++ +++ +F +P ++ + WN M+ G + + ++A F M
Sbjct: 179 DLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMR 238
Query: 140 ER----NTATY-----------------------------------NAMISGFLKHGRLE 160
N+ TY N +++ + K G L
Sbjct: 239 TSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLF 298
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDYMSFKNVVSWTV 210
+A +LF MP+ + +++ ++ G+++ G D+A L D ++F + + ++
Sbjct: 299 DARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLP-SI 357
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ +G +++ + + + +R+P +V++ +A+I + K G +E AR +F++ D
Sbjct: 358 LESGSLRHCKEVHSYIVRHRVP---FDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVA 414
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
AMI+GY +G+ +A+ F +I+ M P+ T+ SV AC+AL L G++ H +
Sbjct: 415 VCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDI 474
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ E V+V +A+ MY++CG + + FR++ + + WN++I++F+Q+G E A+
Sbjct: 475 LKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAV 534
Query: 391 IFFSQMGLNG 400
F QMG++G
Sbjct: 535 DLFRQMGMSG 544
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 158/342 (46%), Gaps = 11/342 (3%)
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTV 210
GR+ + LF + N + + M+ G G D A M NV + +
Sbjct: 93 GRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVI 152
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
G + N C R + ++FV +A+I + G + +AR +F+ + +D +
Sbjct: 153 KACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTI 212
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+N M+ GY ++G A+ F GM + T + + C+ G Q H LV
Sbjct: 213 LWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLV 272
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
I +GFE + V N ++ MYS+CG + D+ F + + V+WN +IA + Q+G ++A
Sbjct: 273 IGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAA 332
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVD 449
F+ M G PD +TF S L + +G + ++ +V+ +P + + L+D
Sbjct: 333 PLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHR--VPFDVYLKSALID 390
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVE 490
I + G +E A +I Q D V ++++ V++ LN++
Sbjct: 391 IYFKGGDVEMARKIFQQNTL-VDVAVCTAMISGYVLHGLNID 431
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 213/475 (44%), Gaps = 55/475 (11%)
Query: 59 ALSRAGKISAARQLFDQMTT---KDVITWNAIITG-YWQNGFLQESKNLFQSMPVKNIVS 114
A S A + ARQ+ Q+ DV ++ + G Y G + + NLF + + N +
Sbjct: 53 ACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALP 112
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAM------PERNTATY---------------------- 146
WN MI G D A ++ M P++ T Y
Sbjct: 113 WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTAR 172
Query: 147 -----------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR- 194
+A+I + +G + +A R+F+++P+R+ I + ML G++K G+ + A
Sbjct: 173 SLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMG 232
Query: 195 ---ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFC 249
+ S N V++T +++ +FC ++ + ++ + V ++ +
Sbjct: 233 TFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYS 292
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K G L +AR LF + D V++N +IAGY QNG +EA LF+ MI ++PD T S
Sbjct: 293 KCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFAS 352
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ L ++ H ++R+ +V + +A+I +Y + G + + F+Q +
Sbjct: 353 FLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVD 412
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ +I+ + HG A+ F + G P+ +T S+L AC + +L
Sbjct: 413 VAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHC 472
Query: 430 LMVK--VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++K + I+ + + D+ ++ G+L+ A++ + M E D+ W S++++
Sbjct: 473 DILKKQLENIVNVG---SAITDMYAKCGRLDLAYEFFRRMS-ETDSICWNSMISS 523
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR + FV +A I S+ GK++ AR +F+ M K+ ++WN+II Y +G +E
Sbjct: 575 VIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCAREC 634
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
+LF M + V++ +I+ C + + YF M Y M+
Sbjct: 635 LDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVD 694
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ + GRL EA + MP
Sbjct: 695 LYGRAGRLHEAFDAIKSMP 713
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 5/233 (2%)
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
L S+F ACS ++ + RQ H +I G ++ + V+ +Y CG I D F +
Sbjct: 47 LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLE 106
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
N + WN +I G ++ AL+F+ +M + PD TF ++ ACG V M
Sbjct: 107 LCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCM- 165
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI- 485
+ + G + L+ + + G + A ++ +P + DT +W +L V
Sbjct: 166 VVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP-QRDTILWNVMLHGYVKS 224
Query: 486 -NLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+ N +G + NS Y + ++ A G + T+V L+ G
Sbjct: 225 GDFNNAMGTFCGMRT-SYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSG 276
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/559 (34%), Positives = 298/559 (53%), Gaps = 36/559 (6%)
Query: 55 AKISALSRAGKIS--AARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
A +SAL A ++ A+ FD D ++++ Y + ++++ +F M ++
Sbjct: 125 AGLSALKPARQVHGIASVSGFD----SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDV 180
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQ 168
VSW+ ++A +D+A F M + N ++N MI+GF G EA +F
Sbjct: 181 VSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLD 240
Query: 169 M------PRRNVISYTA--------MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
M P IS ++ G + G V K +SD VS + +I
Sbjct: 241 MHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSD-----KCVS-SALIDM 294
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK----DCV 270
Y K E ++F +M D V A I G + G +E++ LF +++ + + V
Sbjct: 295 YGKCSCTSEMSQVFDQMDHMD--VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVV 352
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+ +MIA +QNG EAL LF M ++P+ T+ + AC + L G+ +H
Sbjct: 353 SWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFS 412
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+R G +V V +A+I MY++CG I S + F I + NLV WN +IA +A HG ++A+
Sbjct: 413 LRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAM 472
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F M +G PD I+F +LSAC +G E F M YGI EHY C+V +
Sbjct: 473 EIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTL 532
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
LSRAG+LE+A+ + + MP D VWG+LL++C ++ NV LGE+AA+K+ EL+P N Y
Sbjct: 533 LSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNY 592
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
++LSN+YA+ GMW +V RVR +MK +G+ K SWIE+ NKVH L GD SHP + +I
Sbjct: 593 ILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQII 652
Query: 571 LELKRASVQMKSVDDFVEI 589
+L + S++MK + F EI
Sbjct: 653 EKLDKLSMEMKKLGYFPEI 671
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 193/424 (45%), Gaps = 23/424 (5%)
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK-- 187
DA +PE N +++ +I F K + A F QM R ++ +L +K
Sbjct: 66 DATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACA 125
Query: 188 --GEVDKARALSDYMSFKNVVS----WTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
+ AR + S S + ++ Y+K + +A +F RM ++ +V
Sbjct: 126 GLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM--FEPDVVSW 183
Query: 242 TAMITGFCKVGMLENARLLFER-----IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+A++ + + G ++ A+ LF +QP + +S+N MIAG+ +G+ EA+ +F M
Sbjct: 184 SALVAAYARQGCVDEAKRLFSEMGDSGVQP-NLISWNGMIAGFNHSGLYSEAVLMFLDMH 242
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+PD T+ SV A L+ L G H VI+ G ++ V +A+I MY +C
Sbjct: 243 LRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTS 302
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F Q+ ++ S N I +++G E +L F Q+ G + + +++ S+++ C
Sbjct: 303 EMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCS 362
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
G+ E+++LF M ++ G+ P+S CL L G + F G+
Sbjct: 363 QNGRDIEALELFREM-QIAGVKPNSVTIPCL---LPACGNIAALMHGKAAHCFSLRRGIS 418
Query: 477 GSL-LAACVINLNVELGELAAKKM--RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+ + + +I++ + G + A ++ + +N + + YA G ++ + LM
Sbjct: 419 TDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLM 478
Query: 534 KEQG 537
+ G
Sbjct: 479 QRSG 482
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 118/222 (53%), Gaps = 4/222 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+ + T +++ + +A L+ + + + SF+ +I +++ AL FS M+
Sbjct: 47 DTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQML 106
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ PD+ L S AC+ L L RQ H + +GF+++ V ++++ MY +C I
Sbjct: 107 TRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIR 166
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F ++ P++VSW+ ++AA+A+ G ++A FS+MG +G P+ I++ +++
Sbjct: 167 DAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFN 226
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
H+G +E++ +F L + + G P T + +L G LE
Sbjct: 227 HSGLYSEAVLMF-LDMHLRGFEPDG---TTISSVLPAVGDLE 264
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 16/157 (10%)
Query: 29 SCGNFTP----HSSNC--LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVI 82
+CGN +++C L R ST V+V +A I ++ G+I A+R FD + TK+++
Sbjct: 395 ACGNIAALMHGKAAHCFSLRRGISTD-VYVGSALIDMYAKCGRIQASRICFDGIPTKNLV 453
Query: 83 TWNAIITGYWQNGFLQESKNLF----QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
WNA+I GY +G +E+ +F +S +I+S+ C+++ C + ++ YF +M
Sbjct: 454 CWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSM 513
Query: 139 P-----ERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
E Y M++ + G+LE+A + +MP
Sbjct: 514 SSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMP 550
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L++ RQ+H +++ G + + +++ Y+ D+ L + PN+ S++T+I A
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYA 88
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
F++ + AL FSQM G PD S + AC + + + + V G
Sbjct: 89 FSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI-ASVSGFDS 147
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
S + LV + + Q+ A ++ M FE D W +L+AA
Sbjct: 148 DSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA 189
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/525 (33%), Positives = 292/525 (55%), Gaps = 24/525 (4%)
Query: 61 SRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV----SW 115
S+ +++ A +F T + +V +NAII+G+ NGF +E +Q M + ++ ++
Sbjct: 3 SKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTF 62
Query: 116 NCMIAGCIDNDRIDDAFDY-FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
C I C+D I F+ E + +A+++ +LK G +E A FE++P R+V
Sbjct: 63 PCAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDV 122
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK---------NERFCEAR 225
+ + AM++G+ + G+ + M+ ++VV +TG + N R
Sbjct: 123 VLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHG- 181
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
F YD V V ++I + K +E+A +FE ++ KD S+N++ + + Q G
Sbjct: 182 --FAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDH 239
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN------V 339
+ LRL M+ +QPD T+ +V ACS L L GR+ H +I +G + V
Sbjct: 240 DGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDV 299
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
+ NAVI MY++CG + D+ L F ++ + ++ SWN +I + HG+ +AL FS+M
Sbjct: 300 LLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEV 359
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
PD +TF+ +LSAC HAG V++ + M Y + P+ EHYTC++D+L RAGQL++
Sbjct: 360 QLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDE 419
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
A+++ MP EA+ VW +LLAAC ++ + L E+AA+++ EL+P++ YV++SN+Y A
Sbjct: 420 AYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGA 479
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
G + +V VR M++Q V K SWIE+ N VH F+ D +HP
Sbjct: 480 VGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHP 524
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 172/361 (47%), Gaps = 28/361 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+ +A ++ + G + A+ F+++ +DV+ WNA++ GY Q G + F+ M
Sbjct: 91 VFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMND 150
Query: 110 KNIVSWNCMIAGC---------IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+++V + G ++N RI F + + A N++I + K +E
Sbjct: 151 ESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFA-MKMGYDSGVAVSNSLIDMYGKCKCIE 209
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYV 216
+A +FE M +++ S+ ++ + G+ D L D M + V+ T ++
Sbjct: 210 DALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACS 269
Query: 217 KNERFCEARELFYRM---------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
RE+ M D D +V + A+I + K G + +A L+FER+ K
Sbjct: 270 HLAALMHGREIHGYMIVSGLGKDGKDID-DVLLKNAVIDMYAKCGSMRDAHLVFERMXNK 328
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D S+N MI GY +G EAL +FS M ++ ++PD+ T V V +ACS +++GR +
Sbjct: 329 DVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR-NF 387
Query: 328 VLVIRNGFEANVSV--CNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHG 384
+ +++ ++ ++ VI M R G + ++ ELA N V W ++AA H
Sbjct: 388 LAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHK 447
Query: 385 H 385
H
Sbjct: 448 H 448
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/567 (30%), Positives = 301/567 (53%), Gaps = 49/567 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF + A +SAL ++ A D D+ A + Y + G L +++ +F S+P
Sbjct: 283 VFRSCAGLSALKVGTQLHAHALKCD--FGSDITVGTATLDMYAKCGSLADAQRIFNSLPK 340
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK---------HGRLE 160
++ +N +I GC+ N++ +A +FQ + + +SG GR
Sbjct: 341 HSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQL 400
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ + + R N+ ++LD + K + +A + D M ++ VSW +I + +N
Sbjct: 401 HSLSVKSTL-RSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGN 459
Query: 221 FCEARELFYRM------PD-------------------------------YDKNVFVVTA 243
E LF M PD + FV A
Sbjct: 460 EEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGA 519
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+I +CK GM+E A+ + +RI+ + VS+NA+IAG+ +E+A F M+KM ++PD
Sbjct: 520 LIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPD 579
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
+ T V AC+ L + G+Q H +I+ ++V + + ++ MYS+CG + DS L F
Sbjct: 580 NFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFE 639
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+ + + V+WN +I +AQHG E+AL +F +M L P+ TF+S+L AC H G +++
Sbjct: 640 KAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDK 699
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ F M+ YG+ P EHY+C++DI+ R+G++ +A ++ Q MPFEAD +W +LL+ C
Sbjct: 700 GLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSIC 759
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
I+ N+E+ E A + +L+P++S+ ++LSN+YA AGMW V+ +R +M+ + K+
Sbjct: 760 KIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPG 819
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKIH 570
SWIE+ ++VH FL G+ +HP ++I+
Sbjct: 820 CSWIEVKDEVHAFLVGNKTHPRYEEIY 846
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 229/480 (47%), Gaps = 50/480 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+++N + R ++ A ++F++M+ +DVI++N +I+GY G + + F P
Sbjct: 78 VYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPK 137
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN-AMISGFLKHGRLEEATRLFEQ 168
+++VSWN M++G + N + D F M ++ + LK + E L Q
Sbjct: 138 RDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQ 197
Query: 169 MP--------RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ ++V++ +A+LD + K +D + + + KN V W+ +I G V+N+
Sbjct: 198 VHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDE 257
Query: 221 FCEARELFYRMP-------------------------------------DYDKNVFVVTA 243
ELF M D+ ++ V TA
Sbjct: 258 HILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTA 317
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+ + K G L +A+ +F + +NA+I G +N EAL+ F ++K + +
Sbjct: 318 TLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFN 377
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
+ +L F+AC++++ +GRQ H L +++ +N+ V N+++ MY +C + ++ F
Sbjct: 378 EISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFD 437
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
++ + VSWN +IAA Q+G+ E+ L F+ M +PD T+ S+L AC +N
Sbjct: 438 EMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNS 497
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV-WGSLLAA 482
M++ ++K G+ S L+D+ + G +E+A +I + E T V W +++A
Sbjct: 498 GMEIHNRIIKS-GLGLDSFVGGALIDMYCKCGMIEEAKKIHDRI--EQQTMVSWNAIIAG 554
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/585 (23%), Positives = 246/585 (42%), Gaps = 138/585 (23%)
Query: 33 FTP--HSSNCLIRLF----------------STQYVFVNNAKISALSRAGKISAARQLFD 74
F P + SNCL++++ S + V N IS + AG+++ A + F
Sbjct: 74 FIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFY 133
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP-------------------------- 108
+DV++WN++++G+ QNG ++S ++F M
Sbjct: 134 DTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGG 193
Query: 109 --------------VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL 154
K++V+ + ++ R+DD+ F +P +N ++A+I+G +
Sbjct: 194 LGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCV 253
Query: 155 KHGRLEEATRLFEQMPR---------------------------------------RNVI 175
++ LF++M + ++
Sbjct: 254 QNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDIT 313
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM---- 231
TA LD + K G + A+ + + + ++ + +I G V+NE+ EA + F +
Sbjct: 314 VGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSG 373
Query: 232 -------------------PDYD--------------KNVFVVTAMITGFCKVGMLENAR 258
D D N+ V +++ + K L A
Sbjct: 374 LGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEAC 433
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F+ ++ +D VS+NA+IA + QNG EE L LF+ M+++ M+PD T SV ACS+ Q
Sbjct: 434 CMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQ 493
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
LN G + H +I++G + V A+I MY +CG I +++ +I +VSWN IIA
Sbjct: 494 ALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIA 553
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
F H E A FF +M PD T+ +L AC + V + ++K+ +
Sbjct: 554 GFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLE--L 611
Query: 439 PSSEHYT-CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
S + T LVD+ S+ G ++ + + + P D W +++
Sbjct: 612 HSDVYITSTLVDMYSKCGNMQDSALVFEKAP-NKDFVTWNAMICG 655
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 4 NSYFHQTYLKRILFPPILRILSTPDSCGNFT-----PHSSNCLIRLFSTQYVFVNNAKIS 58
+S+F++ LK + P D+C N +I+L V++ + +
Sbjct: 565 HSFFYEM-LKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVD 623
Query: 59 ALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VS 114
S+ G + + +F++ KD +TWNA+I GY Q+G +E+ F+ M ++N+ +
Sbjct: 624 MYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHAT 683
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAM-----PERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ ++ C ID YF AM E Y+ MI + GR+ EA +L ++M
Sbjct: 684 FVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEM 743
Query: 170 P 170
P
Sbjct: 744 P 744
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 40/232 (17%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T + CS L G+Q+H +I +GF +V + N ++ MY RC + + F ++
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+++S+NT+I+ +A G A FF + D +++ S+LS G+ +S+
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFF----YDTPKRDVVSWNSMLSGFLQNGECRKSI 160
Query: 426 DLF-----------------------------ELMVKVYGIIPSSEHY------TCLVDI 450
D+F L ++V+G+I Y + L+D+
Sbjct: 161 DVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDM 220
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
++ +L+ + +I +P + + W +++A CV N LG K+M+++
Sbjct: 221 YAKCKRLDDSLKIFSEIPVK-NWVCWSAIIAGCVQNDEHILGLELFKEMQKV 271
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 297/540 (55%), Gaps = 35/540 (6%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN-----IVSWNCMIAGCI 123
AR++FD+M +D + WNA++ GY +NG + + + M ++ V+ ++ C
Sbjct: 279 ARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACA 338
Query: 124 DND-----RIDDAFDYFQAMPER-NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
D R AF E+ N +T A++ + K G ++ A ++F+ M RN +S+
Sbjct: 339 DAQALGACREVHAFAVRGGFDEQVNVST--AILDVYCKCGAVDSARKVFDGMQDRNSVSW 396
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT--------------GYVKNERFCE 223
AM+ G+ + G+ +A AL FK +V V +T G++ R
Sbjct: 397 NAMIKGYAENGDATEALAL-----FKRMVGEGVDVTDVSVLAALHACGELGFLDEGR--R 449
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
EL R+ + NV V+ A+IT +CK + A +F+ + K VS+NAMI G QNG
Sbjct: 450 VHELLVRI-GLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNG 508
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+E+A+RLFS M +++PD TLVS+ A + + + R H IR + +V V
Sbjct: 509 SSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 568
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
A+I MY++CG + + F ++++WN +I + HG + A+ F +M +G P
Sbjct: 569 ALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVP 628
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ TFLS+LSAC HAG V+E + F M + YG+ P EHY +VD+L RAG+L +AW
Sbjct: 629 NETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSF 688
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW 523
Q MP E V+G++L AC ++ NVEL E +A+++ EL+P+ +V+L+N+YA A +W
Sbjct: 689 IQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLW 748
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+DV RVR M+++G+ K +S +++ N++H F G +H I+ L + ++K+V
Sbjct: 749 KDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAV 808
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 157/283 (55%), Gaps = 9/283 (3%)
Query: 139 PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD 198
PE AT A+ + + K R +A R+F++MP R+ +++ A++ G+ + G + A +
Sbjct: 258 PEALAAT--ALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVV 315
Query: 199 YMSFK-----NVVSWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKV 251
M + + V+ ++ + RE+ F +D+ V V TA++ +CK
Sbjct: 316 RMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKC 375
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G +++AR +F+ +Q ++ VS+NAMI GYA+NG A EAL LF M+ + D ++++
Sbjct: 376 GAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAAL 435
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
AC L L+EGR+ H L++R G E+NV+V NA+ITMY +C + F ++ V
Sbjct: 436 HACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRV 495
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
SWN +I Q+G E A+ FS+M L PD T +S++ A
Sbjct: 496 SWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPA 538
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 136/255 (53%), Gaps = 3/255 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
TA+ + K +AR +F+R+ +D V++NA++AGYA+NG+AE A+ + M
Sbjct: 259 EALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQ 318
Query: 297 KMDMQ-PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ D + PD TLVSV AC+ Q L R+ H +R GF+ V+V A++ +Y +CG +
Sbjct: 319 EEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAV 378
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F + N VSWN +I +A++G +AL F +M G D ++ L+ L AC
Sbjct: 379 DSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHAC 438
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
G G ++E + EL+V++ G+ + L+ + + + + A Q+ + ++
Sbjct: 439 GELGFLDEGRRVHELLVRI-GLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVS- 496
Query: 476 WGSLLAACVINLNVE 490
W +++ C N + E
Sbjct: 497 WNAMILGCTQNGSSE 511
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IRL Q V+V A I ++ G++S AR LF+ + VITWNA+I GY +G + +
Sbjct: 556 IRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAV 615
Query: 102 NLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISG 152
LF+ M V N ++ +++ C +D+ +YF +M E Y M+
Sbjct: 616 ELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDL 675
Query: 153 FLKHGRLEEATRLFEQMPRRNVIS-YTAML 181
+ G+L EA ++MP IS Y AML
Sbjct: 676 LGRAGKLHEAWSFIQKMPMEPGISVYGAML 705
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 135/315 (42%), Gaps = 58/315 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+R+ V V NA I+ + + A Q+FD++ K ++WNA+I G QNG +++
Sbjct: 454 LVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDA 513
Query: 101 KNLFQSMPVKNIVSWNCMIAGCI------------------------DND---------- 126
LF M ++N+ + + I D D
Sbjct: 514 VRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 573
Query: 127 -----RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISY 177
R+ A F + +R+ T+NAMI G+ HG + A LFE+M N ++
Sbjct: 574 YAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTF 633
Query: 178 TAMLDGFMKKGEVDKARAL-----SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
++L G VD+ + DY + + M+ + + EA +MP
Sbjct: 634 LSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP 693
Query: 233 DYDKNVFVVTAMITGFCKVG-----MLENARLLFERIQPKDCVSFNAMIAG-YAQNGVAE 286
+ + V AM+ G CK+ E+A+ +FE ++P++ V ++ ++A YA + +
Sbjct: 694 -MEPGISVYGAML-GACKLHKNVELAEESAQRIFE-LEPEEGV-YHVLLANIYANASLWK 749
Query: 287 EALRLFSGMIKMDMQ 301
+ R+ + M K +Q
Sbjct: 750 DVARVRTAMEKKGLQ 764
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T S+ C+A L GR H + G A+ MY++C D+ F ++
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG-LNGFDPDGITFLSLLSACGHAGKVNES 424
+ + V+WN ++A +A++G E A+ +M +G PD +T +S+L AC A +
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
++ V+ G T ++D+ + G ++ A ++ GM
Sbjct: 347 REVHAFAVR-GGFDEQVNVSTAILDVYCKCGAVDSARKVFDGM 388
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/559 (34%), Positives = 297/559 (53%), Gaps = 36/559 (6%)
Query: 55 AKISALSRAGKIS--AARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
A +SAL A ++ A+ FD D ++++ Y + ++++ +F M ++
Sbjct: 125 AGLSALKPARQVHGIASVSGFD----SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDV 180
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQ 168
VSW+ ++A +D+A F M + N ++N MI+GF G EA +F
Sbjct: 181 VSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLD 240
Query: 169 M------PRRNVISYTA--------MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
M P IS ++ G + G V K +SD VS + +I
Sbjct: 241 MHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSD-----KCVS-SALIDM 294
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK----DCV 270
Y K E ++F +M D V A I G + G +E++ LF +++ + + V
Sbjct: 295 YGKCSCTSEMSQVFDQMDHMD--VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVV 352
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+ +MIA +QNG EAL LF M ++P+ T+ + AC + L G+ +H
Sbjct: 353 SWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFS 412
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+R G +V V +A+I MY++CG I S + F I + NLV WN +IA +A HG ++A+
Sbjct: 413 LRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAM 472
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F M +G PD I+F +LSAC +G E F M YGI EHY C+V +
Sbjct: 473 EIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTL 532
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
LSRAG+LE+A+ + + MP D VWG+LL++C ++ NV LGE+AA+K+ EL+P N Y
Sbjct: 533 LSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNY 592
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
++LSN+YA+ GMW +V RVR +MK +G+ K SWIE+ NKVH L GD SHP + +I
Sbjct: 593 ILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQII 652
Query: 571 LELKRASVQMKSVDDFVEI 589
L + S++MK + F EI
Sbjct: 653 ENLDKLSMEMKKLGYFPEI 671
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 193/424 (45%), Gaps = 23/424 (5%)
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK-- 187
DA +PE N +++ +I F K + A F QM R ++ +L +K
Sbjct: 66 DATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACA 125
Query: 188 --GEVDKARALSDYMSFKNVVS----WTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
+ AR + S S + ++ Y+K + +A +F RM ++ +V
Sbjct: 126 GLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM--FEPDVVSW 183
Query: 242 TAMITGFCKVGMLENARLLFER-----IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+A++ + + G ++ A+ LF +QP + +S+N MIAG+ +G+ EA+ +F M
Sbjct: 184 SALVAAYARQGCVDEAKRLFSEMGDSGVQP-NLISWNGMIAGFNHSGLYSEAVLMFLDMH 242
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+PD T+ SV A L+ L G H VI+ G ++ V +A+I MY +C
Sbjct: 243 LRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTS 302
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F Q+ ++ S N I +++G E +L F Q+ G + + +++ S+++ C
Sbjct: 303 EMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCS 362
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
G+ E+++LF M ++ G+ P+S CL L G + F G+
Sbjct: 363 QNGRDMEALELFREM-QIAGVKPNSVTIPCL---LPACGNIAALMHGKAAHCFSLRRGIS 418
Query: 477 GSL-LAACVINLNVELGELAAKKM--RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+ + + +I++ + G + A ++ + +N + + YA G ++ + LM
Sbjct: 419 TDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLM 478
Query: 534 KEQG 537
+ G
Sbjct: 479 QRSG 482
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 118/222 (53%), Gaps = 4/222 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+ + T +++ + +A L+ + + + SF+ +I +++ AL FS M+
Sbjct: 47 DTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQML 106
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ PD+ L S AC+ L L RQ H + +GF+++ V ++++ MY +C I
Sbjct: 107 TRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIR 166
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F ++ P++VSW+ ++AA+A+ G ++A FS+MG +G P+ I++ +++
Sbjct: 167 DAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFN 226
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
H+G +E++ +F L + + G P T + +L G LE
Sbjct: 227 HSGLYSEAVLMF-LDMHLRGFEPDG---TTISSVLPAVGDLE 264
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 16/157 (10%)
Query: 29 SCGNFTP----HSSNC--LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVI 82
+CGN +++C L R ST V+V +A I ++ G+I A+R FD + TK+++
Sbjct: 395 ACGNIAALMHGKAAHCFSLRRGISTD-VYVGSALIDMYAKCGRIQASRICFDGIPTKNLV 453
Query: 83 TWNAIITGYWQNGFLQESKNLF----QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
WNA+I GY +G +E+ +F +S +I+S+ C+++ C + ++ YF +M
Sbjct: 454 CWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSM 513
Query: 139 P-----ERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
E Y M++ + G+LE+A + +MP
Sbjct: 514 SSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMP 550
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L++ RQ+H +++ G + + +++ Y+ D+ L + PN+ S++T+I A
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYA 88
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
F++ + AL FSQM G PD S + AC + + + + V G
Sbjct: 89 FSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI-ASVSGFDS 147
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
S + LV + + Q+ A ++ M FE D W +L+AA
Sbjct: 148 DSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA 189
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 311/583 (53%), Gaps = 44/583 (7%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+ T +FVNNA I ++AG + A + F+ MT +D I+WNAII GY Q +
Sbjct: 344 IIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGA 403
Query: 101 KNLFQSMPVKNIV----SWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
+LF+ M + IV S +++ C N ++ +A F + E N +++I
Sbjct: 404 FSLFRRMILDGIVPDEVSLASILSAC-GNIKVLEAGQQFHCLSVKLGLETNLFAGSSLID 462
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD------------Y 199
+ K G +++A + + MP R+V+S A++ G+ K + L + +
Sbjct: 463 MYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESINLLHEMQILGLKPSEITF 522
Query: 200 MSFKNVVSWTVMIT-------GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
S +V + + VK C + F+ T+++ +
Sbjct: 523 ASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSE-------------FLGTSLLGMYMDSQ 569
Query: 253 MLENARLLFERIQP-KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
L +A +LF K V + A+I+G+ QN ++ AL L+ M ++ PD AT V+V
Sbjct: 570 RLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVL 629
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NL 370
AC+ L L++GR+ H L+ GF+ + +A++ MY++CG + S F ++ + ++
Sbjct: 630 QACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDV 689
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
+SWN++I FA++G+ + AL F +M + PD +TFL +L+AC HAG V E +F++
Sbjct: 690 ISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDV 749
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
MV YGI P +HY C+VD+L R G L++A + + E + +W +LL AC I+ + +
Sbjct: 750 MVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEK 809
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
G+ AAKK+ EL+PQ+S+ YV+LSN+YAA+G W + +R M ++ + K SWI +G
Sbjct: 810 RGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVG 869
Query: 551 NKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSW 593
+ + F+ GD+SH D+I LK + +K + F +I SW
Sbjct: 870 QETNLFVAGDISHSSYDEISKALKHLTALIKDNNRFQDIVISW 912
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 237/552 (42%), Gaps = 89/552 (16%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDV--ITWNAIITGYWQNGF 96
+C+I+ F A I ++ ++ AR +F + ++W A+I+GY Q G
Sbjct: 71 SCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGL 130
Query: 97 LQESKNLFQSM---PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--RNTATYNAMIS 151
E+ ++F M V + V+ ++ I ++DDA FQ MP RN +N MIS
Sbjct: 131 PHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMIS 190
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISY---------------------------------- 177
G K EEA F QM + V S
Sbjct: 191 GHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFES 250
Query: 178 -----TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM- 231
+++++ + K D AR + D +S KN++ W M+ Y +N ELF M
Sbjct: 251 SIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMI 310
Query: 232 -----PD-------------------------------YDKNVFVVTAMITGFCKVGMLE 255
PD + N+FV A+I + K G L+
Sbjct: 311 SCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALK 370
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A FE + +D +S+NA+I GY Q V A LF MI + PD+ +L S+ +AC
Sbjct: 371 EAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACG 430
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+++L G+Q H L ++ G E N+ +++I MYS+CG I D+ + + ++VS N
Sbjct: 431 NIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNA 490
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+IA +A E ++ +M + G P ITF SL+ C + KV + + +VK
Sbjct: 491 LIAGYALKNTKE-SINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVK-R 548
Query: 436 GIIPSSEHY-TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
G++ SE T L+ + + +L A + +W +L++ + N E ++
Sbjct: 549 GLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQN---ECSDV 605
Query: 495 AAKKMRELDPQN 506
A RE+ N
Sbjct: 606 ALNLYREMRDNN 617
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
+E L+ ++ + PD T +AC+ LQ L+ GR H VI++G E+ A
Sbjct: 28 SERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGA 87
Query: 345 VITMYSRCGGILDSELAFRQIHSPNL--VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
+I +Y++C + + F P+L VSW +I+ + Q G +AL F +M N
Sbjct: 88 LIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMR-NSAV 146
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELM 431
PD + +++L+A GK++++ LF+ M
Sbjct: 147 PDQVALVTVLNAYISLGKLDDACQLFQQM 175
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/555 (33%), Positives = 306/555 (55%), Gaps = 30/555 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF NA I+A ++ + A QLFDQ+ D++++N +I+ Y G + LF M
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 110 KNI----VSWNCMIAGCIDND---------RIDDAFDYFQAMPERNTATYNAMISGFLKH 156
+ + + +I C D+ + FD + + NA+++ + K+
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSY-------VSVNNALLTYYGKN 186
Query: 157 GRLEEATRLFEQMPR-RNVISYTAMLDGFMKKGEVDKARALSDYMSFK--NVVSWTV--M 211
G L++A R+F M R+ +S+ +M+ + + E KA L M + NV +T+ +
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246
Query: 212 ITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGM-LENARLLFERIQPKD 268
+T + E + ++ + +N V + +I + K G + + R +FE I D
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPD 306
Query: 269 CVSFNAMIAGYAQNG-VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
V +N M++GY+QN E+AL F M + +P+D + V V +ACS L ++G+Q H
Sbjct: 307 LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIH 366
Query: 328 VLVIRNGFEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
L +++ +N +SV NA+I MYS+CG + D+ F ++ N VS N++IA +AQHG
Sbjct: 367 SLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIE 426
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++L F M P ITF+S+LSAC H G+V E + F +M + + I P +EHY+C
Sbjct: 427 MESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
++D+L RAG+L +A + MPF + W SLL AC + N+EL AA ++ +L+P N
Sbjct: 487 MIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
+A YV+LSN+YA+AG W +V VR M+++GV K+ SWIE+ ++H F+ D SHP I
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMI 606
Query: 567 DKIHLELKRASVQMK 581
+I+ L+ S +MK
Sbjct: 607 KEIYEFLEEMSGKMK 621
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 125/243 (51%), Gaps = 8/243 (3%)
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
Y K R AR+ F + D NVF A+I + K A LF++I D VS+N
Sbjct: 53 YSKCGRLAWARKAFQDISD--PNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNT 110
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA-CSALQLLNEGRQSHVLVIRN 333
+I+ YA G AL LFSGM +M + D TL +V TA C + L+ Q H + + +
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIG---QLHSVAVSS 167
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIF 392
GF++ VSV NA++T Y + G + D++ F + + VSWN++I A+ QH KAL
Sbjct: 168 GFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGL 227
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M G + D T S+L+A ++ + ++K G +S + L+D+ S
Sbjct: 228 FQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYS 286
Query: 453 RAG 455
+ G
Sbjct: 287 KCG 289
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ C A + L+ G+ H L I++ + N I +YS+CG + + AF+ I PN
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ S+N IIAA+A+ A F Q+ +PD +++ +L+SA G+ ++ LF
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 430 LM 431
M
Sbjct: 130 GM 131
>gi|38347497|emb|CAE05845.2| OSJNBa0091C07.7 [Oryza sativa Japonica Group]
Length = 749
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/531 (31%), Positives = 301/531 (56%), Gaps = 16/531 (3%)
Query: 57 ISALSRAGKISAARQLFDQMT-TKDVITWNAIITGYWQ--NGFLQESKNLFQSMPVKNIV 113
+ AL R +S A L +M ++D+ W AII+GY + N + +S LF + ++ V
Sbjct: 185 VVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGV 244
Query: 114 -----SWNCMIAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEEATR 164
+++ ++ C+ ++ Q+ E +A++ + + G +++A
Sbjct: 245 MPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVM 304
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
++ + ++I+ ++ GF+ G + A+ + M+ + S+ +MI Y R +
Sbjct: 305 VYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDC 364
Query: 225 RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNG 283
R +F MP +N+ + +M++ + G LE R LFE+I+ ++ V++N+MI+GY QN
Sbjct: 365 RRMFEMMPR--RNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQND 422
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+ EAL+LF+ M ++ ++ +T ++ AC+ + + +G+ H L+ + FE+N V
Sbjct: 423 QSSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGT 482
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
A++ MYS+CG + D+ AF I SPN+ SW ++I AQ+GH+ +A++ F++M N P
Sbjct: 483 ALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKP 542
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ ITFL +L A AG VN+ M F M + YG++P+ EHYTC VD+L RA ++ +A +
Sbjct: 543 NEITFLGILMASARAGLVNKGMRFFHSM-ESYGVVPTVEHYTCAVDLLGRARRVREAEKF 601
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW 523
MP AD VWG+LL AC +++E+GE A+K+ + ++ + YV +SN+YA G W
Sbjct: 602 ISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKW 661
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
DV +VR ++ K+ SWIE+ + VH FL D +HP ++I+L L+
Sbjct: 662 EDVVKVRTRLRSINAKKEPGCSWIEVKDMVHVFLVEDRNHPEREEIYLMLE 712
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 173/352 (49%), Gaps = 16/352 (4%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
CLI+ + +A + R+G + A +++ + +IT N +I G+ G ++
Sbjct: 273 CLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTED 332
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+K +F M + S+N MI D R++D F+ MP RN T N+M+S L++G+L
Sbjct: 333 AKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKL 392
Query: 160 EEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYM----------SFKNVVSW 208
EE +LFEQ+ RN +++ +M+ G+++ + +A L M +F ++
Sbjct: 393 EEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALLHA 452
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
I G ++ + A L + P ++ N +V TA++ + K G + +AR F I +
Sbjct: 453 CATI-GTIEQGKMVHA--LLCKTP-FESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPN 508
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
S+ ++I G AQNG EA+ F+ M+K +++P++ T + + A + L+N+G +
Sbjct: 509 VASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFH 568
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAA 379
+ G V + + R + ++E ++ P + V W ++ A
Sbjct: 569 SMESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTA 620
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR +F+ ++ + +S+NA +A +A+ G +AL + M + D+AT S AC+
Sbjct: 65 ARGVFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACAR 124
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
+ L G Q H V+++G + V +++ YS C + + F +H+ N + W+ +
Sbjct: 125 GRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPM 184
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE----SMDLFELMV 432
+ A + AL +M P F G+A NE S++LF ++
Sbjct: 185 VVALVRFNLLSDALDLLQRM-----PPSRDLFAWTAIISGYARGANEYCCKSLELFVQLL 239
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLE 458
G++P+ Y ++ + G LE
Sbjct: 240 AEDGVMPNEFTYDSVLRACVKMGALE 265
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/667 (28%), Positives = 330/667 (49%), Gaps = 137/667 (20%)
Query: 52 VNNAKISALSRAGKISAARQLFDQM---TTKDVITWNAIITGYWQNGFLQESKNLFQSM- 107
+ NA IS S+ G + A+Q FD++ + +DV+TWNA+I+ + +NG +E+ LF+ M
Sbjct: 44 LGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMD 103
Query: 108 ----PVKNIVSWNCMIAGCID------------NDRI----------------------- 128
P N V++ ++ C++ + RI
Sbjct: 104 HDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLG 163
Query: 129 --DDAFDYF----QAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------------- 169
DDA++ F P + T +AMIS ++G +E+ RLF M
Sbjct: 164 SLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLV 223
Query: 170 ----------------------------PRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
R NV+ T +L + + ++ +ARA D +
Sbjct: 224 SVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLG-TTLLTTYARSNDLSRARATFDAIQ 282
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------------------------------ 231
+VVSW M Y+++ R EA LF RM
Sbjct: 283 SPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAI 342
Query: 232 ----------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP--KDCVSFNAMIAGY 279
+ + V A + + K G L +AR +FERI P +DC+++N+M+A Y
Sbjct: 343 GKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAY 402
Query: 280 AQNGVAEEALRLFSGMIKMDM-QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
+G+ +EA LF M + +P+ T V+V A ++ + +GR+ H V+ NGFE++
Sbjct: 403 GHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESD 462
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHS--PNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ NA++ MY++CG + D++ F + S ++++W +++A +AQ+G E+AL F M
Sbjct: 463 TVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTM 522
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G P+ ITF+S L+AC H GK+ + +L M +GI+P+S+H++C+VD+L R G+
Sbjct: 523 QQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGR 582
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
L++A ++ + +AD W +LL AC + +E GE A+++ +LDP+ ++ Y++L+++
Sbjct: 583 LDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASM 641
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
YAAAG W + +R M ++G+ S +E+ ++H F GD SHP ++I+LEL+R
Sbjct: 642 YAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERL 701
Query: 577 SVQMKSV 583
+K+
Sbjct: 702 HWSIKAA 708
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 201/449 (44%), Gaps = 80/449 (17%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDV----ITWNAIITGYWQNGFLQESKNLFQSMPVK 110
A ++A S G ++A R++ Q++ +D + NA+I+ Y + G L ++K F +P
Sbjct: 12 ALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRA 71
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM- 169
+ +R+ T+NAMIS FL++G EA +LF M
Sbjct: 72 S----------------------------KRDVVTWNAMISAFLRNGSAREALQLFRDMD 103
Query: 170 ----PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
P N +++ ++LD ++ G +S ++V + I G
Sbjct: 104 HDGAPPPNSVTFVSVLDSCVEAG----------LLSLEDVRAIHGRIVG----------- 142
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD----CVSFNAMIAGYAQ 281
++ FV TA++ + K+G L++A +F R ++ V+ +AMI+ Q
Sbjct: 143 ------AGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQ 196
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG +E+LRLF M +P TLVSV ACS L + + V+ E +
Sbjct: 197 NGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPV----GSATAFVLEQAMEVVSAT 252
Query: 342 CNAV-----ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ V +T Y+R + + F I SP++VSWN + AA+ QH +AL+ F +M
Sbjct: 253 RDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERM 312
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESM--DLFELMVKVYGIIPSSEHYTCLVDILSRA 454
L G P TF++ L+AC S + +++ G+ + +++ ++
Sbjct: 313 LLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKC 372
Query: 455 GQLEKAWQITQGM-PFEADTGVWGSLLAA 482
G L A + + + P D W S+LAA
Sbjct: 373 GSLADARAVFERISPTRRDCITWNSMLAA 401
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 100/172 (58%), Gaps = 7/172 (4%)
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
M+++P+ L+++ ACS L L GR+ H + FE N + NA+I+MYS+CG ++D
Sbjct: 1 MEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLID 60
Query: 358 SELAFRQI---HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF-DPDGITFLSLLS 413
++ AF ++ ++V+WN +I+AF ++G +AL F M +G P+ +TF+S+L
Sbjct: 61 AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLD 120
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHY--TCLVDILSRAGQLEKAWQI 463
+C AG ++ D+ + ++ G E + T LVD + G L+ AW++
Sbjct: 121 SCVEAGLLSLE-DVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEV 171
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 199/583 (34%), Positives = 315/583 (54%), Gaps = 22/583 (3%)
Query: 17 FPPILRILS-TPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FP +LR PD H+ ++R + V V NA ++ ++ G + AAR++FD
Sbjct: 198 FPCVLRSCGGVPDWRMGREVHAH--VLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDS 255
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCM------IAGCIDNDRID 129
M D I+WNA+I G+++NG LF +M +++ V N M +A + +D I
Sbjct: 256 MAVMDCISWNAMIAGHFENGECNAGLELFLTM-LQDEVQPNLMTITSVTVASGLLSD-IT 313
Query: 130 DAFDYFQAMPERNTAT----YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
A + +R AT N++I + G + +A +F +M R+ +S+TAM+ G+
Sbjct: 314 FAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYE 373
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN------VF 239
K G DKA + M NV + I + + ++ ++ + ++ V
Sbjct: 374 KNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVV 433
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V A++ + K ++ A +F+ + KD VS+++MIAG+ N EAL F M+ D
Sbjct: 434 VTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-D 492
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++P+ T ++ AC+A L G++ H V+R G + NA+I +Y +CG +
Sbjct: 493 VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAW 552
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + ++VSWN +IA F HG+ E AL FF+QM G PD +TF++LL AC G
Sbjct: 553 AQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGG 612
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
V+E +LF M Y I+P+ +HY C+VD+LSR GQL +A+ MP D VWG+L
Sbjct: 613 MVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGAL 672
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
L C I+ +VELGELAAK + EL+P ++ +V+L +LYA AG+W + RVR M+E+G+
Sbjct: 673 LNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLD 732
Query: 540 KQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
SW+E+ VH FL D SHP I +I+ L+ +MK+
Sbjct: 733 HDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKA 775
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 212/425 (49%), Gaps = 18/425 (4%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---- 107
+ NA +S L R G+ A ++F +M +DV +WN ++ GY + G L+E+ +L+ M
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190
Query: 108 PVKNIVSWNCMIAGC--IDNDRIDDAF--DYFQAMPERNTATYNAMISGFLKHGRLEEAT 163
++ ++ C++ C + + R+ + NA+++ + K G + A
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR 250
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVK 217
++F+ M + IS+ AM+ G + GE + L M V ++ + +G +
Sbjct: 251 KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLS 310
Query: 218 NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ F + + +V ++I + +GM+ AR +F R+ +D +S+ AMI+
Sbjct: 311 DITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMIS 370
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GY +NG ++AL +++ M ++ PDD T+ S AC+ L L+ G + H L GF +
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMS 430
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA-QHGHYEKALIFFSQM 396
V V NA++ MY++ I + F+ + ++VSW+++IA F H ++E AL +F M
Sbjct: 431 YVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFE-ALYYFRHM 489
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
L P+ +TF++ L+AC G + ++ +++ GI L+D+ + GQ
Sbjct: 490 -LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRC-GIAYEGYLPNALIDLYVKCGQ 547
Query: 457 LEKAW 461
AW
Sbjct: 548 TGYAW 552
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/639 (28%), Positives = 305/639 (47%), Gaps = 121/639 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V +A + ++ + + +F ++ K+ I+W+A I G QN L LF+ M
Sbjct: 192 VVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQR 251
Query: 110 KNI-----------------------VSWNC-------------------MIAGCIDNDR 127
K I +C M A C D
Sbjct: 252 KGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKC---DN 308
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR--------------- 172
+ DA+ F +P+ N +YNAMI G+ ++ + +A +LF Q+ +
Sbjct: 309 MSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSA 368
Query: 173 ------------------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
N+ A+LD + K G + +A L D M ++ VSW
Sbjct: 369 AAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSW 428
Query: 209 TVMITGYVKNE----------------------------RFCEARELFYRMPDYDKNV-- 238
+IT +NE + C + F + +
Sbjct: 429 NAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIK 488
Query: 239 -------FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
FV +A++ + K GM+E A + R++ + VS+NA+I+G++ +E++ R
Sbjct: 489 SGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRF 548
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
FS M++M ++PD+ T +V C+ L + G+Q H +I+ ++V + + ++ MYS+
Sbjct: 549 FSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSK 608
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG + DS L FR+ + V+WN +I FA HG E+AL F M P+ TF+S+
Sbjct: 609 CGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSV 668
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L AC H G + + F+ M +Y + P EHY+C+VDIL R+GQ+E+A ++ Q MPFEA
Sbjct: 669 LRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEA 728
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
D +W +LL+ C I NVE+ E AA + +LDP++S+ Y +LSN+YA AGMW+ V+++R
Sbjct: 729 DAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQ 788
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
M+ + K+ SWIE+ ++VH FL D +HP + I+
Sbjct: 789 TMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIY 827
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 216/463 (46%), Gaps = 47/463 (10%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T VFV N I + + A ++F++M +D+++WN ++ G G ++ ++ +F S
Sbjct: 56 TPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNS 115
Query: 107 MPVK-NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
MP ++VSWN +I+G + N I + F M + + ++ LK L E L
Sbjct: 116 MPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVL 175
Query: 166 FEQMP--------RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
Q+ +V++ +A++D + K ++ + + + KN +SW+ I G V+
Sbjct: 176 GIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQ 235
Query: 218 NERFCEARELFYRM-------------------------------------PDYDKNVFV 240
N++ +LF M D+ +V V
Sbjct: 236 NDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIV 295
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
TA + + K + +A LF + + S+NAMI GYA+N +A +LF + K
Sbjct: 296 GTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSF 355
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
D+ +L +A + ++ +EG Q H L I++ +N+ V NA++ MY +CG ++++
Sbjct: 356 SFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASG 415
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++ + VSWN II A Q+ K L F M + +PD T+ S+L AC
Sbjct: 416 LFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRA 475
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ M++ ++K G+ + LVD+ S+ G +E+A +I
Sbjct: 476 FSNGMEVHGRIIKS-GMGLKMFVGSALVDMYSKCGMMEEAEKI 517
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T +F CS + L G+++H +I +GF V V N +I MY +C + + F ++
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
++VSWNT++ A G E A F+ M +G D +++ SL+S G + +S+
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHG---DVVSWNSLISGYLQNGDIQKSI 142
Query: 426 DLFELM----------------------------VKVYGI-IPSSEHY-----TCLVDIL 451
+F M ++++GI + Y + LVD+
Sbjct: 143 AVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMY 202
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
++ LE + + +P + + W + +A CV N + G K+M+
Sbjct: 203 AKCNSLEDSLDVFSELP-DKNWISWSAAIAGCVQNDQLLRGLKLFKEMQ 250
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 28 DSCGNFTP-------HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKD 80
D+C N H+ + L S V++ + + S+ G + + +F + +D
Sbjct: 569 DTCANLATVGLGKQIHAQMIKLELLSD--VYITSTLVDMYSKCGNMHDSLLMFRKAPKRD 626
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQ 136
+TWNA+I G+ +G +E+ LF+ M +NI ++ ++ C YFQ
Sbjct: 627 SVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQ 686
Query: 137 AMP-----ERNTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEV 190
M E Y+ M+ + G++EEA RL + MP + I + +L +G V
Sbjct: 687 KMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNV 746
Query: 191 DKAR 194
+ A
Sbjct: 747 EVAE 750
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/555 (33%), Positives = 306/555 (55%), Gaps = 30/555 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF NA I+A ++ + A QLFDQ+ D++++N +I+ Y G + LF M
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 110 KNI----VSWNCMIAGCIDND---------RIDDAFDYFQAMPERNTATYNAMISGFLKH 156
+ + + +I C D+ + FD + + NA+++ + K+
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSY-------VSVNNALLTYYGKN 186
Query: 157 GRLEEATRLFEQMPR-RNVISYTAMLDGFMKKGEVDKARALSDYMSFK--NVVSWTV--M 211
G L++A R+F M R+ +S+ +M+ + + E KA L M + NV +T+ +
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246
Query: 212 ITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGM-LENARLLFERIQPKD 268
+T + E + ++ + +N V + +I + K G + + R +FE I D
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPD 306
Query: 269 CVSFNAMIAGYAQNG-VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
V +N M++GY+QN E+AL F M + +P+D + V V +ACS L ++G+Q H
Sbjct: 307 LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIH 366
Query: 328 VLVIRNGFEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
L +++ +N +SV NA+I MYS+CG + D+ F ++ N VS N++IA +AQHG
Sbjct: 367 SLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIE 426
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++L F M P ITF+S+LSAC H G+V E + F +M + + I P +EHY+C
Sbjct: 427 MESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
++D+L RAG+L +A + MPF + W SLL AC + N+EL AA ++ +L+P N
Sbjct: 487 MIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
+A YV+LSN+YA+AG W +V VR M+++GV K+ SWIE+ ++H F+ D SHP I
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMI 606
Query: 567 DKIHLELKRASVQMK 581
+I+ L+ S +MK
Sbjct: 607 KEIYEFLEEMSGKMK 621
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 125/243 (51%), Gaps = 8/243 (3%)
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
Y K R AR+ F + D NVF A+I + K A LF++I D VS+N
Sbjct: 53 YSKCGRLAWARKAFQDISD--PNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNT 110
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA-CSALQLLNEGRQSHVLVIRN 333
+I+ YA G AL LFSGM +M + D TL +V TA C + L+ Q H + + +
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIG---QLHSVAVSS 167
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIF 392
GF++ VSV NA++T Y + G + D++ F + + VSWN++I A+ QH KAL
Sbjct: 168 GFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGL 227
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M G + D T S+L+A ++ + ++K G +S + L+D+ S
Sbjct: 228 FQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYS 286
Query: 453 RAG 455
+ G
Sbjct: 287 KCG 289
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ C A + L+ G+ H L I++ + N I +YS+CG + + AF+ I PN
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ S+N IIAA+A+ A F Q+ +PD +++ +L+SA G+ ++ LF
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 430 LM 431
M
Sbjct: 130 GM 131
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 268/478 (56%), Gaps = 42/478 (8%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
Y A I+ ++ L E ++ +M R V T ++ +++ G +D AR + D M
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------------------------------ 231
++VVSWT MI+GY + ER EA +LF +M
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 232 -------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+++ ++FV ++++ + K ++ AR +F+ + +D VS A+I+GYAQ G+
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EEAL LF + MQ + T ++ TA S L L+ G+Q H L++R V++ N+
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+I MYS+CG +L S F + ++VSWN ++ + +HG + + F + PD
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPD 311
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+T L++LS C H G V+E +D+F+ +VK + + HY C++D+L R+G+LEKA +
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 371
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
+ MPFE+ +WGSLL AC ++ NV +GEL A+K+ E++P+N+ YV+LSN+YAAAGMW+
Sbjct: 372 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 431
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
DV +VR LM E+ VTK+ SWI + +H F + HP I+ ++K V +K+
Sbjct: 432 DVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKA 489
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 205/444 (46%), Gaps = 57/444 (12%)
Query: 43 RLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
R+ + +Y VF+ ++ R G + AR + D+M + V++W +I+GY Q E
Sbjct: 35 RMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVE 94
Query: 100 SKNLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMIS 151
+ +LF M + N + ++ C I + + N ++ ++++
Sbjct: 95 ALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLD 154
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG----EVDKARALSDYMSFKNVVS 207
+ K ++EA R+F+ +P R+V+S TA++ G+ +KG +D R L N V+
Sbjct: 155 MYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVT 214
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVV--TAMITGFCKVGMLENARLLFERIQ 265
+T ++T +++ + + FV ++I + K G L +R +F+ +
Sbjct: 215 FTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNML 274
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+ VS+NAM+ GY ++G+ E + LF + K +++PD TL++V + CS L++EG
Sbjct: 275 ERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEG-- 331
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+ + + V+ S +H+ + + II + G
Sbjct: 332 -------------LDIFDTVVKEQSAL------------LHTGH---YGCIIDLLGRSGR 363
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP-SSEH 443
EKAL M F+ + SLL AC +V+ ++ + EL+ K+ + P ++ +
Sbjct: 364 LEKALNLIENM---PFESTPSIWGSLLGAC----RVHANVHVGELVAQKLLEMEPENAGN 416
Query: 444 YTCLVDILSRAGQLEKAWQITQGM 467
Y L +I + AG + +++ + M
Sbjct: 417 YVILSNIYAAAGMWKDVFKVRKLM 440
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L++ ++FV ++ + +++ I AR++FD + +DV++ AII+GY Q G +E+
Sbjct: 137 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 196
Query: 101 KNLFQSMPVK----NIVSWNCMIA-----GCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
+LF+ + + N V++ ++ +D + A + +P A N++I
Sbjct: 197 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP-FFVALQNSLID 255
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ K G+L + R+F+ M R+V+S+ AML G+ + G
Sbjct: 256 MYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 292
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/495 (35%), Positives = 266/495 (53%), Gaps = 14/495 (2%)
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA----FDYFQAMPERNTATYNAMISG 152
+ S +F + N+ WNCMI CI+N+ A ++ A N TY A++
Sbjct: 88 FESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKA 147
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE-----VDKARALSDYMSFKNVVS 207
G + E ++ + + + +L ++ V+ R L D + V
Sbjct: 148 CSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVC 207
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
W MI GY++ ARELF MPD + AMI+GF + GM+E AR F+ ++ +
Sbjct: 208 WNAMIDGYLRFGEVEAARELFEGMPDRSM-ISTWNAMISGFSRCGMVEVAREFFDEMKER 266
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D +S++AMI GY Q G EAL +F M K ++P L SV +AC+ L L++GR H
Sbjct: 267 DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIH 326
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
RN + + + +++ MY++CG I + F ++ + + SWN +I A HG E
Sbjct: 327 TYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAE 386
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
A+ FS+M + P+ ITF+ +L+AC H G V + + +F M K YG+ P EHY C+
Sbjct: 387 DAIDLFSKMDIY---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCI 443
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
VD+L RAG L +A ++ +P E VWG+LL AC + NVELGE K + EL+PQNS
Sbjct: 444 VDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNS 503
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG-NKVHYFLGGDMSHPCI 566
Y +LSN+YA AG W +V VR LMKE+G+ S I++G +VH F+ GD SHP +
Sbjct: 504 GRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQV 563
Query: 567 DKIHLELKRASVQMK 581
I+ L + +++
Sbjct: 564 KDIYQMLDKVKERLQ 578
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 159/343 (46%), Gaps = 62/343 (18%)
Query: 64 GKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS-WNCMIAG 121
G++ AR++ D + D + WNA+I GY + G ++ ++ LF+ MP ++++S WN MI+G
Sbjct: 187 GRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISG 246
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRRNVI 175
++ A ++F M ER+ +++AMI G+++ G EA +F QM PR+ V+
Sbjct: 247 FSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVL 306
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELFYRM 231
++L G +D+ R + Y ++ V T ++ Y K R A E+F +M
Sbjct: 307 P--SVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKM 364
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
+K V AMI G A +G AE+A+ L
Sbjct: 365 S--NKEVSSWNAMIGGL-------------------------------AMHGRAEDAIDL 391
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN------GFEANVSVCNAV 345
FS KMD+ P++ T V V AC+ L+ +G L I N G E + +
Sbjct: 392 FS---KMDIYPNEITFVGVLNACAHGGLVQKG-----LTIFNSMRKEYGVEPQIEHYGCI 443
Query: 346 ITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYE 387
+ + R G + ++E I + P W ++ A +HG+ E
Sbjct: 444 VDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVE 486
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 20/276 (7%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVI-TWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
NA I R G++ AAR+LF+ M + +I TWNA+I+G+ + G ++ ++ F M ++
Sbjct: 209 NAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDE 268
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN----AMISGFLKHGRLEEATRLFEQ 168
+SW+ MI G I +A + F M + +++S G L++ R
Sbjct: 269 ISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG-RWIHT 327
Query: 169 MPRRNVISY-----TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+RN I T+++D + K G +D A + + MS K V SW MI G + R +
Sbjct: 328 YAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAED 387
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----FNAMIAG 278
A +LF +M Y + V ++ G+++ +F ++ + V + ++
Sbjct: 388 AIDLFSKMDIYPNEITFV-GVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDL 446
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ G+ EA ++ S + +P A ++ AC
Sbjct: 447 LGRAGLLTEAEKVVS---SIPTEPTPAVWGALLGAC 479
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 51/283 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI- 112
NA IS SR G + AR+ FD+M +D I+W+A+I GY Q G E+ +F M + I
Sbjct: 241 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 300
Query: 113 --------VSWNCMIAGCIDN------------------------------DRIDDAFDY 134
V C G +D RID A++
Sbjct: 301 PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEV 360
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKA 193
F+ M + +++NAMI G HGR E+A LF +M N I++ +L+ G V K
Sbjct: 361 FEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDIYPNEITFVGVLNACAHGGLVQKG 420
Query: 194 RALSDYMSFKNVVSWTVMITGYV-----KNERFCEARELFYRMPDYDKNVFVVTAMITGF 248
+ + M + V + G + + EA ++ +P + V + G
Sbjct: 421 LTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP--TEPTPAVWGALLGA 478
Query: 249 CK----VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
C+ V + E + ++P++ + + YA+ G EE
Sbjct: 479 CRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEE 521
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYS-----RCGGILDSELAFRQIHSPNLVSWN 374
L+ +Q+H L++R G + + +++ Y+ R S F + PN+ WN
Sbjct: 48 LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 107
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I ++ KA++ + +M + P+ T+ ++L AC +G V E + + +VK
Sbjct: 108 CMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVK- 166
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
+G+ + + + + G+L +A +I E D W ++ I+ + GE+
Sbjct: 167 HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAM-----IDGYLRFGEV 221
Query: 495 -AAKKMRELDPQNSAV 509
AA+++ E P S +
Sbjct: 222 EAARELFEGMPDRSMI 237
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 280/511 (54%), Gaps = 38/511 (7%)
Query: 80 DVITWNAIITGYWQ---NGFLQESKNLFQSMPVKNIVSWNCMIAG--CIDNDRIDDAFDY 134
D+ T NA++ Y + G N+F MP + S + + CI ID
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEV 190
F+ MP ++ +YN +I+G+ + G E+A R+ +M + + + +++L F + +V
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCK 250
K + + Y+ K + D +V++ ++++ + K
Sbjct: 259 IKGKEIHGYVIRKGI-----------------------------DSDVYIGSSLVDMYAK 289
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+E++ +F R+ +D +S+N+++AGY QNG EALRLF M+ ++P SV
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV 349
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
AC+ L L+ G+Q H V+R GF +N+ + +A++ MYS+CG I + F +++ +
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
VSW II A HGH +A+ F +M G P+ + F+++L+AC H G V+E+ F
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M KVYG+ EHY + D+L RAG+LE+A+ M E VW +LL++C ++ N+E
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLE 529
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
L E A+K+ +D +N YV++ N+YA+ G W+++ ++RL M+++G+ K+ A SWIE+
Sbjct: 530 LAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMK 589
Query: 551 NKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
NK H F+ GD SHP +DKI+ LK QM+
Sbjct: 590 NKTHGFVSGDRSHPSMDKINEFLKAVMEQME 620
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 152/378 (40%), Gaps = 99/378 (26%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----------------PV 109
I + R++F+ M KDV+++N II GY Q+G +++ + + M P+
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 110 ----------KNIVSWNCMIAGCIDND---------------RIDDAFDYFQAMPERNTA 144
K I + +I ID+D RI+D+ F + R+
Sbjct: 252 FSEYVDVIKGKEIHGY--VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPR--------------------------------- 171
++N++++G++++GR EA RLF QM
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 172 ------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
N+ +A++D + K G + AR + D M+ + VSWT +I G+ + EA
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 226 ELFYRMP--DYDKNVFVVTAMITGFCKVGMLENARLLFERIQP-----KDCVSFNAMIAG 278
LF M N A++T VG+++ A F + ++ + A+
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA---LQLLNEGRQSHVLVIRNGF 335
+ G EEA S KM ++P + ++ ++CS L+L + + V
Sbjct: 490 LGRAGKLEEAYNFIS---KMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENM 546
Query: 336 EANVSVCNAVITMYSRCG 353
A V +CN MY+ G
Sbjct: 547 GAYVLMCN----MYASNG 560
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ +A + S+ G I AAR++FD+M D ++W AII G+ +G E+ +LF+ M
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPE-----RNTATYNAMISGFLKHGRLE 160
+ N V++ ++ C +D+A+ YF +M + + Y A+ + G+LE
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 161 EATRLFEQM---PRRNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVSWTVMITG 214
EA +M P +V ++ +L ++ A +++ + +N+ ++ +M
Sbjct: 498 EAYNFISKMCVEPTGSV--WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 215 YVKNERFCEARELFYRM 231
Y N R+ E +L RM
Sbjct: 556 YASNGRWKEMAKLRLRM 572
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 38/262 (14%)
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ ++ +++ ++I + + +AL F M PD SV +C+ + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSR---------CGGILDS------------- 358
G H ++R G + ++ NA++ MY++ G + D
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 359 --------------ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
F + ++VS+NTIIA +AQ G YE AL +MG PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
T S+L V + ++ +++ GI + LVD+ +++ ++E + ++
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIR-KGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 465 QGMPFEADTGVWGSLLAACVIN 486
+ + D W SL+A V N
Sbjct: 301 SRL-YCRDGISWNSLVAGYVQN 321
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 112/251 (44%), Gaps = 26/251 (10%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
M A + ++ + ++ ++ +Q H IR ++ S + VI++Y+ + ++
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEAL 59
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
L F+ + SP +++W ++I F + KAL F +M +G PD F S+L +C
Sbjct: 60 LLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSC---- 115
Query: 420 KVNESMDLFELMVKVYGIIP----SSEHYTCLVDILSRAGQLEKAWQITQGMPFE----- 470
MDL V+G I + YT + A L +I+ G F+
Sbjct: 116 --TMMMDL-RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQR 172
Query: 471 -ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV-YVMLSNLYAAAGMWRDVTR 528
+++G C++ ++ + +++ E+ P+ V Y + YA +GM+ D R
Sbjct: 173 TSNSGDEDVKAETCIMPFGID----SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALR 228
Query: 529 VRLLMKEQGVT 539
+++E G T
Sbjct: 229 ---MVREMGTT 236
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/573 (30%), Positives = 309/573 (53%), Gaps = 47/573 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV++A I + GKI ++F +MT ++V++W AII G G+ E+ F M +
Sbjct: 192 VFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWI 251
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEE 161
+ + A + + +A+ + ++ N + + + K G+ +
Sbjct: 252 SKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADY 311
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVD----------KARALSDYMSFKNVVS---- 207
RLFE+M +V+S+T ++ +++KGE + K+ + +F V+S
Sbjct: 312 VMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACAN 371
Query: 208 -----WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
W I G+V +A + V +++T + K G+L++A L+F
Sbjct: 372 LAIAKWGEQIHGHVLRLGLVDA-------------LSVANSIVTLYSKSGLLKSASLVFH 418
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
I KD +S++ +IA Y+Q G A+EA S M + +P++ L SV + C ++ LL +
Sbjct: 419 GITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQ 478
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+Q H V+ G + V +A+I+MYS+CG + ++ F + N++SW +I +A+
Sbjct: 479 GKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAE 538
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG+ ++A+ F ++ G PD +TF+ +L+AC HAG V+ F LM Y I PS E
Sbjct: 539 HGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKE 598
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HY C++D+L RAG+L +A + + MP D VW +LL +C ++ +V+ G A+++ L
Sbjct: 599 HYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRL 658
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
DP ++ ++ L+N+YAA G W++ +R LMK +GV K+ +SW+ + +K++ F+ GD +
Sbjct: 659 DPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQA 718
Query: 563 HPCIDKIH--LELKRASV-----QMKSVDDFVE 588
HP + I LEL A++ +++S++D VE
Sbjct: 719 HPQSEHITTVLELLSANIGDARQEIRSLNDDVE 751
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 218/444 (49%), Gaps = 28/444 (6%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+S + N+++ L + G++ +R +FD+MT +D I+W +I GY E+ LF
Sbjct: 85 YSVHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILF 144
Query: 105 QSMPVKN-------IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY--NAMISGFLK 155
+M V+ ++S G N + F + + +A+I ++K
Sbjct: 145 SNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMK 204
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVM 211
G++E+ R+F++M +RNV+S+TA++ G + G +A M V ++ +
Sbjct: 205 VGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIA 264
Query: 212 ITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
+ + + + + +D++ FV+ + T + K G + LFE+++ D
Sbjct: 265 LKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDV 324
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+ +I Y Q G E A+ F M K ++ P+ T +V +AC+ L + G Q H
Sbjct: 325 VSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGH 384
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
V+R G +SV N+++T+YS+ G + + L F I +++SW+TIIA ++Q G+ ++A
Sbjct: 385 VLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEA 444
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY------GIIPSSEH 443
+ S M G P+ S+LS CG SM L E +V+ GI +
Sbjct: 445 FDYLSWMRREGPKPNEFALSSVLSVCG-------SMALLEQGKQVHAHVLCIGIDHEAMV 497
Query: 444 YTCLVDILSRAGQLEKAWQITQGM 467
++ L+ + S+ G +E+A +I GM
Sbjct: 498 HSALISMYSKCGSVEEASKIFNGM 521
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 160/348 (45%), Gaps = 40/348 (11%)
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
N++ + L +K+G++ K+R + D M+ ++ +SWT +I GYV EA LF M
Sbjct: 88 HNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNM 147
Query: 232 ---PDYDKN-----------------------------------VFVVTAMITGFCKVGM 253
P ++ VFV +A+I + KVG
Sbjct: 148 WVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGK 207
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+E +F+++ ++ VS+ A+IAG G EAL FS M + D T A
Sbjct: 208 IEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKA 267
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
+ LL+ G+ H I+ GF+ + V N + TMY++CG F ++ P++VSW
Sbjct: 268 SADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSW 327
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
T+I + Q G E A+ F +M + P+ TF +++SAC + + +++
Sbjct: 328 TTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLR 387
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ G++ + +V + S++G L+ A + G+ D W +++A
Sbjct: 388 L-GLVDALSVANSIVTLYSKSGLLKSASLVFHGIT-RKDIISWSTIIA 433
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 131/303 (43%), Gaps = 54/303 (17%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++RL + V N+ ++ S++G + +A +F +T KD+I+W+ II Y Q G+ +E+
Sbjct: 385 VLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEA 444
Query: 101 KNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISG 152
+ M P N + + +++ C ++ + + ++A+IS
Sbjct: 445 FDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISM 504
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDYMSF 202
+ K G +EEA+++F M N+IS+TAM++G+ + G +A L DY++F
Sbjct: 505 YSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTF 564
Query: 203 KNVVS------------------------------WTVMITGYVKNERFCEARELFYRMP 232
V++ + +I + R EA + MP
Sbjct: 565 IGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMP 624
Query: 233 DYDKNVFVVTAMITGFCKV-GMLENARLLFE---RIQPKDCVSFNAMIAGYAQNGVAEEA 288
Y +V T + + C+V G ++ R E R+ P + A+ YA G +EA
Sbjct: 625 CYTDDVVWSTLLRS--CRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEA 682
Query: 289 LRL 291
+
Sbjct: 683 AHI 685
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/524 (33%), Positives = 295/524 (56%), Gaps = 21/524 (4%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK- 110
+ A + ++ G + A+++F+ M KD+ W++II Y + G + + L++ M +
Sbjct: 67 LETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEG 126
Query: 111 ---NIVSWNCMIAGCIDNDRIDDAFDYFQ-----AMPERNTATYNAMISGFLKHGRLEEA 162
N+V++ C + GC + D Q +P+ + +++++ +LK + EA
Sbjct: 127 VEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQ-DDVLQDSLLNMYLKCDEMVEA 185
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV---SWT-VMITGYVKN 218
++FE M RNV SYTAM+ +++ GE +A L MS + ++T I G V+
Sbjct: 186 RKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEG 245
Query: 219 ERFCEARELFYRM---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E +R +D NV V A++T + K G AR +F+ + ++ +S+ +M
Sbjct: 246 LGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSM 305
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IA YAQ+G +EAL LF +MD++P + S AC+ L L+EGR+ H V+
Sbjct: 306 IAAYAQHGNPQEALNLFK---RMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEANL 362
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
A+ + ++++MY+RCG + D+ F ++ + + S N +IAAF QHG ++AL + +
Sbjct: 363 -ASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRK 421
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G DGITF+S+L AC H V + D + +V +G++P EHY C+VD+L R+G
Sbjct: 422 MEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSG 481
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L A ++ + MP++AD W +LL+ C + +++ GE AA+K+ EL P + YV LSN
Sbjct: 482 RLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSN 541
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
+YAAA + D RVR M+E+GVT+ A S+IEI N++H F G
Sbjct: 542 MYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSG 585
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 51/392 (13%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTAT----YNAMISGFLKHGRLEEATRLFEQMP--- 170
MIA C+ R A + + M ER ++++ K LEE RL E +
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 171 -RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
R ++ TA+L + K G +D A+ + + M K++ +W+ +I Y + R A L+
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 230 RM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ----PKDCV------------- 270
RM + NV + G V L + R + +RI P+D V
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 271 ------------------SFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVF 311
S+ AMI+ Y Q G EAL LFS M K++ ++P+ T ++
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
A L L +GR+ H + GF+ NV V NA++TMY +CG +++ F + + N++
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SW ++IAA+AQHG+ ++AL F +M + +P G++F S L+AC G ++E ++ +
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRMDV---EPSGVSFSSALNACALLGALDEGREIHHRV 357
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
V+ P E T L+ + +R G L+ A ++
Sbjct: 358 VEANLASPQME--TSLLSMYARCGSLDDARRV 387
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 51/301 (16%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
R F T V V NA ++ + G AR++FD MT ++VI+W ++I Y Q+G QE+ N
Sbjct: 262 RGFDTN-VVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 320
Query: 103 LFQSMPVK-NIVSWN-----CMIAGCIDNDR----------------------------- 127
LF+ M V+ + VS++ C + G +D R
Sbjct: 321 LFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQMETSLLSMYARCGS 380
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDG 183
+DDA F M R+ + NAMI+ F +HGR ++A R++ +M + + I++ ++L
Sbjct: 381 LDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVA 440
Query: 184 FMKKGEVDKAR-----ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV 238
V R + D+ V + M+ ++ R +A EL MP Y +
Sbjct: 441 CSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMP-YQADA 499
Query: 239 FVVTAMITGFCKVGMLEN----ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+++G + G L+ AR +FE + P + + + + YA ++A R+
Sbjct: 500 VAWMTLLSGCKRHGDLDRGERAARKVFE-LAPAETLPYVFLSNMYAAAKRFDDARRVRKE 558
Query: 295 M 295
M
Sbjct: 559 M 559
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 305/590 (51%), Gaps = 41/590 (6%)
Query: 27 PDSCGNFTPHSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWN 85
P + H+ C L + VFV+ A ++ + G +S A+++FD M ++ ++W
Sbjct: 134 PSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWA 193
Query: 86 AIITGYWQNGFLQESKNLF----QSMPVKN------------IVSWNCMIAGCIDNDRID 129
A+++GY +E+ LF Q P++ V ++ + +
Sbjct: 194 AMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLK 253
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
D F + N++++ + K ++ A R+F RN I+++AM+ G+ + GE
Sbjct: 254 DGLVGF-------VSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGE 306
Query: 190 VDKARALSDYMSFKNVVSWTVMITG-----------YVKNERFCEARELFYRMPDYDKNV 238
+ A + M G V + C +L + Y
Sbjct: 307 ANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVY---- 362
Query: 239 FVVTAMITGFCKVGMLENARLLFERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
V +A++ + K G + +A+ F ++ D V + AMI G+ QNG EEAL L+S M K
Sbjct: 363 -VKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDK 421
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+ P T+ SV AC+ L L+ G+Q H +++ F SV A+ TMYS+CG + D
Sbjct: 422 QGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLED 481
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
S + FR++ +++SWN+II+ F+QHG AL F +M L G PD ITF++LLSAC H
Sbjct: 482 SMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSH 541
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
G V+ F M K Y +IP+ +HY C+VDILSRAGQL++A + + T +W
Sbjct: 542 MGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLWR 601
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+L AC + ++G A +++ EL ++S+ Y++LSN+YAA W DV RVR LM+ +G
Sbjct: 602 IVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRG 661
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFV 587
V+K SW+E+ N+VH F+ G+ HP + I++EL R + MK + F+
Sbjct: 662 VSKDLGCSWVELYNRVHVFVVGEQQHPEAENINVELIRLAKHMKDEECFL 711
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 212/453 (46%), Gaps = 59/453 (13%)
Query: 85 NAIITGYWQ--NGFLQESKNLFQSMP--VKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-- 138
N++IT Y L + +F +P ++++ SWN ++ + + A +F++M
Sbjct: 53 NSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLNPLSRHHPVS-ALSHFRSMMS 111
Query: 139 -PERNTATYNAMISGFLKHGRLEEAT----------RLFEQMPRRNVISYTAMLDGFMKK 187
PE + ++ + F R+ A+ +L NV TA+L+ + K
Sbjct: 112 SPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKL 171
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD---YDKNVFVVTA- 243
G V A+ + D M +N VSW M++GY + EA ELF M +KN FV TA
Sbjct: 172 GAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAV 231
Query: 244 ----------------------------------MITGFCKVGMLENARLLFERIQPKDC 269
++T + K ++ A +F + ++
Sbjct: 232 LSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNS 291
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
++++AMI GYAQNG A A R+F M P + T V V ACS + L G+Q+H L
Sbjct: 292 ITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCL 351
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEK 388
+++ GFE V V +A++ MY++CG I D++ F Q++ ++V W +I Q+G +E+
Sbjct: 352 MVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEE 411
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL+ +S+M G P +T S+L AC ++ L ++K + S T L
Sbjct: 412 ALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVG-TALS 470
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ S+ G LE + + + MP + D W S+++
Sbjct: 471 TMYSKCGNLEDSMVVFRRMP-DRDVISWNSIIS 502
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 287/541 (53%), Gaps = 16/541 (2%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI---- 112
+SA S+ G I A R+ FD+M D+++WNA+I Y N F+ M ++ I
Sbjct: 2 LSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGE 61
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V + ++ C D I A+ E + A++S + K G +A +F +
Sbjct: 62 VGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLR 121
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV-MITGYVKNERFCEARE- 226
M R+V++++AM+ + + G +A L M V V +++G + R
Sbjct: 122 MSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSG 181
Query: 227 -LFYRMPD---YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
L ++ + V V TA++ + K G +E A F +I K+ V+++A+ A YA+N
Sbjct: 182 ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARN 241
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH--VLVIRNGFEANVS 340
+A+R+ M + P+ T VSV AC+A+ L +GR+ H V+ G E++V
Sbjct: 242 DRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVY 301
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V A++ MYS+CG + + F +I +LV WN++IA AQHG EKAL F +M L G
Sbjct: 302 VLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEG 361
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
P ITF S+L AC HAG +++ F + +GI P +EH+ C+VD+L RAG + +
Sbjct: 362 LQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDS 421
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
+ MPFE W + L AC N++ AA+ + +LDP+ A YV+LSN+YA A
Sbjct: 422 EDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKA 481
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
G W DV R+R M+ K+ SWIE+ ++VH F+ GD+ HP I +IH EL+R + M
Sbjct: 482 GRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLM 541
Query: 581 K 581
K
Sbjct: 542 K 542
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 168/381 (44%), Gaps = 64/381 (16%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
V A +S + G + A +F +M+ +DV+ W+A++ Y +NG +E+ LF+ M +
Sbjct: 97 IVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLD 156
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+ + +D A+ + SG L H R+E Q
Sbjct: 157 GVAPNKVTLVSGLD-----------------ACASLGDLRSGALMHQRVE------AQGI 193
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
+ V+ TA+++ + K G ++ A + KNVV+W+ + Y +N+R +A + +R
Sbjct: 194 QSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHR 253
Query: 231 M------PD---------------------------------YDKNVFVVTAMITGFCKV 251
M P+ + +V+V+TA++ + K
Sbjct: 254 MDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKC 313
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G L A +F++I D V +N++IA AQ+G E+AL LF M +QP T SV
Sbjct: 314 GNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVL 373
Query: 312 TACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSE-LAFRQIHSPN 369
ACS +L++GR+ V I + G ++ + R G I+DSE L P+
Sbjct: 374 FACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPH 433
Query: 370 LVSWNTIIAAFAQHGHYEKAL 390
V+W + A + + ++A+
Sbjct: 434 PVAWMAFLGACRTYRNMDRAI 454
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 122/243 (50%), Gaps = 2/243 (0%)
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
M++ + ++G + R F+ + D VS+NA+IA Y N + F GM+ + P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
+ + +AC+ + + GR + ++ G E V A+++MY + G D+ F
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
++ ++V+W+ ++AA+A++GH +AL F QM L+G P+ +T +S L AC G +
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDL-R 179
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
S L V+ GI T LV++ + G++E A + G E + W ++ AA
Sbjct: 180 SGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVE-AFGQIVEKNVVAWSAISAAY 238
Query: 484 VIN 486
N
Sbjct: 239 ARN 241
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 28/251 (11%)
Query: 18 PPILRILSTPDSCGNFTPHSSNCLI--RLFSTQY---VFVNNAKISALSRAGKISAARQL 72
P + ++S D+C + S L+ R+ + V V A ++ + G+I AA +
Sbjct: 160 PNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEA 219
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF 132
F Q+ K+V+ W+AI Y +N +++ + M ++ +V + +D
Sbjct: 220 FGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDA------- 272
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
A I+ + R+ E T++ +V TA+++ + K G +
Sbjct: 273 --------------CAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLAL 318
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCK 250
A + D ++ ++V W +I ++ + +A ELF RM + T+++
Sbjct: 319 AGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSH 378
Query: 251 VGMLENARLLF 261
GML+ R F
Sbjct: 379 AGMLDQGRKHF 389
>gi|242061948|ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 182/549 (33%), Positives = 293/549 (53%), Gaps = 26/549 (4%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
R G+ AR + +T+ +++ N ++ Y + + F +P KN S+N ++A
Sbjct: 53 RLGRAVHARLVKTALTSHTLLS-NRLVALYSRLPSSAAAVAAFDDLPHKNAHSYNTLLAA 111
Query: 122 CIDN-DRIDDAFDYFQAMPE--RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYT 178
+ D DA F MP RN +YN ++S + HGR EA R+ ++ R +
Sbjct: 112 LLRRPDTFPDALHLFDTMPADARNLVSYNTLMSSLVHHGRQAEALRVVARLARDRFLGPG 171
Query: 179 AMLDGFM------KKGEVDKARALSDYMSFK-------NVVSWTVMITGYVKNERFCEAR 225
+D F + AR L + V+ M+ Y K R EAR
Sbjct: 172 LAMDRFTVVSVATACAGIRAARPLREMHGAVVVSGMELTVIMANAMVNAYSKAWRVEEAR 231
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
LF ++ D + T+MI+G+C+V L+ A +F+ + KD V++ A+I+G+ QNG
Sbjct: 232 HLFDQISIRDNVTW--TSMISGYCQVKKLDEALQVFDMMPDKDRVAWTALISGHEQNGEE 289
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA---NVSVC 342
+ AL LF M+ + P LVSV AC+ L L+ G++ H ++R + N+ +
Sbjct: 290 DTALELFERMLAEGVSPTTFALVSVLGACAKLGLVTRGKELHCSILRRSIGSDPFNIFIH 349
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
NA++ MYS+CG + + F ++ + +SWN+++ F+ +G +++L F +M + G
Sbjct: 350 NALVDMYSKCGDMTAAMAVFHRMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVR 409
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P +TFL++L+AC H+G V+ + E M + +G+ P +EHY +D L R QLE+A +
Sbjct: 410 PTHVTFLAVLTACSHSGLVSNGRLILESM-EDHGVEPRAEHYAAFIDALGRNRQLEEAIE 468
Query: 463 ITQGMPFE---ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
+ +P G WG+LL AC ++ N+EL E A+ + +L+P NS YVMLSN+YAA
Sbjct: 469 FIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEEVAEFLFKLEPGNSGRYVMLSNIYAA 528
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQ 579
AG W D RVR LMKE+G+ K AYSWIE+ + H F+ DMSH D+I+ L +
Sbjct: 529 AGQWDDARRVRGLMKEKGLKKDQAYSWIEVRSLKHVFVADDMSHCEADEIYEMLGKLLDH 588
Query: 580 MKSVDDFVE 588
M + +D E
Sbjct: 589 MSTAEDPTE 597
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 130/264 (49%), Gaps = 19/264 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + NA ++A S+A ++ AR LFDQ++ +D +TW ++I+GY Q L E+ +F MP
Sbjct: 211 VIMANAMVNAYSKAWRVEEARHLFDQISIRDNVTWTSMISGYCQVKKLDEALQVFDMMPD 270
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM-PERNTATYNAMISGFLKHGRLEEATR---L 165
K+ V+W +I+G N D A + F+ M E + T A++S +L TR L
Sbjct: 271 KDRVAWTALISGHEQNGEEDTALELFERMLAEGVSPTTFALVSVLGACAKLGLVTRGKEL 330
Query: 166 FEQMPRR-------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
+ RR N+ + A++D + K G++ A A+ M ++ +SW M+TG+ N
Sbjct: 331 HCSILRRSIGSDPFNIFIHNALVDMYSKCGDMTAAMAVFHRMPERDFISWNSMVTGFSHN 390
Query: 219 ERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFER-----IQPKDCVS 271
++ +F M VT A++T G++ N RL+ E ++P+
Sbjct: 391 GLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLILESMEDHGVEPR-AEH 449
Query: 272 FNAMIAGYAQNGVAEEALRLFSGM 295
+ A I +N EEA+ +
Sbjct: 450 YAAFIDALGRNRQLEEAIEFIKDL 473
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
A S +L GR H +++ ++ + N ++ +YSR + AF + N S
Sbjct: 45 AISTGDVLRLGRAVHARLVKTALTSHTLLSNRLVALYSRLPSSAAAVAAFDDLPHKNAHS 104
Query: 373 WNTIIAAFAQHGH-YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+NT++AA + + AL F M + + +++ +L+S+ H G+ E++
Sbjct: 105 YNTLLAALLRRPDTFPDALHLFDTMPADARNL--VSYNTLMSSLVHHGRQAEAL 156
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/532 (31%), Positives = 292/532 (54%), Gaps = 42/532 (7%)
Query: 68 AARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-------PVKNIVSWNCMIA 120
+A +LFD++ +DVI+WN++I+GY NG + +++ M + I+S ++
Sbjct: 203 SASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIIS---VLV 259
Query: 121 GCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
GC ++ + ++ ER N ++ + K G L+ A R+FE+M RNV+S
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNERFCEAREL--FYR 230
+T+M+ G+ + G D A L M + +VV+ T ++ ++ +++ + +
Sbjct: 320 WTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIK 379
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+ + N+FV A++ + K G ++ A +F + KD +S+N MI
Sbjct: 380 ANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG------------- 426
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
+++PD T+ + AC++L L G++ H ++RNG+ ++ V NA++ +Y
Sbjct: 427 --------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG + + L F I S +LVSW +I+ + HG+ +A+ F++M G +PD ++F+S
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+L AC H+G + + F +M + I P EHY C+VD+LSR G L KA++ + +P
Sbjct: 539 ILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIA 598
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
D +WG+LL C I ++EL E A+++ EL+P+N+ YV+L+N+YA A W +V R+R
Sbjct: 599 PDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMR 658
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGG-DMSHPCIDKIHLELKRASVQMK 581
+ ++G+ K SWIEI KV+ F+ G + SHP KI LK+ +MK
Sbjct: 659 EKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 710
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 188/425 (44%), Gaps = 66/425 (15%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N + S+ G + A ++F++M ++V++W ++I GY ++G + L Q M + +
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGV 348
Query: 113 ---------VSWNCMIAGCIDNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEA 162
+ C +G +DN + D DY +A E N NA++ + K G ++ A
Sbjct: 349 KLDVVATTSILHACARSGSLDNGK--DVHDYIKANNMESNLFVCNALMDMYTKCGSMDGA 406
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+F M +++IS+ M+ G +K A L S + + I GY+
Sbjct: 407 NSVFSTMVVKDIISWNTMI-GELKPDSRTMACILPACASL-SALERGKEIHGYILRN--- 461
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
Y + V A++ + K G+L ARLLF+ I KD VS+ MI+GY +
Sbjct: 462 ----------GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMH 511
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G EA+ F+ M ++PD+ + +S+ ACS LL +G + +++N F
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR-FFYIMKNDFNI----- 565
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
P L + ++ ++ G+ KA F + +
Sbjct: 566 ------------------------EPKLEHYACMVDLLSRTGNLSKAYEFIETLPIA--- 598
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP-SSEHYTCLVDILSRAGQLEKA 460
PD + +LL C ++ ++L E + +V+ + P ++ +Y L +I + A + E+
Sbjct: 599 PDATIWGALLCGC----RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEV 654
Query: 461 WQITQ 465
++ +
Sbjct: 655 KRMRE 659
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 107/272 (39%), Gaps = 57/272 (20%)
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
R + +NA I + Q G E A+ L K +++ T SV C+ + L +
Sbjct: 60 RTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTD 117
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN------------- 369
G++ H ++ N + + ++++Y+ CG + + F + N
Sbjct: 118 GKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177
Query: 370 --------------------------------------LVSWNTIIAAFAQHGHYEKALI 391
++SWN++I+ + +G E+ L
Sbjct: 178 IGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLE 237
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT-CLVDI 450
+ QM G D D T +S+L C ++G ++ + L +K +++ L+D+
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK--STFERRINFSNTLLDM 295
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
S+ G L+ A ++ + M E + W S++A
Sbjct: 296 YSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 326
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V NA + + G + AR LFD + +KD+++W +I+GY +G+ E+ F M
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAG 528
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEA 162
I VS+ ++ C + ++ + +F M E Y M+ + G L +A
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588
Query: 163 TRLFEQMP 170
E +P
Sbjct: 589 YEFIETLP 596
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 268/478 (56%), Gaps = 42/478 (8%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
Y A I+ ++ L E ++ +M R V T ++ +++ G +D AR + D M
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------------------------------ 231
++VVSWT MI+GY + ER EA +LF +M
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 232 -------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+++ ++FV ++++ + K ++ AR +F+ + +D VS A+I+GYAQ G+
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EEAL LF + MQ + T ++ TA S L L+ G+Q H L++R V++ N+
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+I MYS+CG +L S F + ++VSWN ++ + +HG + + F + PD
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPD 311
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+T L++LS C H G V+E +D+F+ +VK + + HY C++D+L R+G+LEKA +
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 371
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
+ MPFE+ +WGSLL AC ++ NV +GEL A+K+ E++P+N+ YV+LSN+YAAAGMW+
Sbjct: 372 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 431
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
DV +VR LM E+ VTK+ SWI + +H F + HP I+ ++K V +K+
Sbjct: 432 DVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKA 489
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 205/444 (46%), Gaps = 57/444 (12%)
Query: 43 RLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
R+ + +Y VF+ ++ R G + AR + D+M + V++W +I+GY Q E
Sbjct: 35 RMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVE 94
Query: 100 SKNLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMIS 151
+ +LF M + N + ++ C I + + N ++ ++++
Sbjct: 95 ALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLD 154
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG----EVDKARALSDYMSFKNVVS 207
+ K ++EA R+F+ +P R+V+S TA++ G+ +KG +D R L N V+
Sbjct: 155 MYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVT 214
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVV--TAMITGFCKVGMLENARLLFERIQ 265
+T ++T +++ + + FV ++I + K G L +R +F+ +
Sbjct: 215 FTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNML 274
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+ VS+NAM+ GY ++G+ E + LF + K +++PD TL++V + CS L++EG
Sbjct: 275 ERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEG-- 331
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+ + + V+ S +H+ + + II + G
Sbjct: 332 -------------LDIFDTVVKEQSAL------------LHTGH---YGCIIDLLGRSGR 363
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP-SSEH 443
EKAL M F+ + SLL AC +V+ ++ + EL+ K+ + P ++ +
Sbjct: 364 LEKALNLIENM---PFESTPSIWGSLLGAC----RVHANVHVGELVAQKLLEMEPENAGN 416
Query: 444 YTCLVDILSRAGQLEKAWQITQGM 467
Y L +I + AG + +++ + M
Sbjct: 417 YVILSNIYAAAGMWKDVFKVRKLM 440
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L++ ++FV ++ + +++ I AR++FD + +DV++ AII+GY Q G +E+
Sbjct: 137 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 196
Query: 101 KNLFQSMPVK----NIVSWNCMIA-----GCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
+LF+ + + N V++ ++ +D + A + +P A N++I
Sbjct: 197 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP-FFVALQNSLID 255
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ K G+L + R+F+ M R+V+S+ AML G+ + G
Sbjct: 256 MYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 292
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 204/662 (30%), Positives = 321/662 (48%), Gaps = 115/662 (17%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQE 99
+I+ VFV N+ +S ++ I AR+LFD+M + DV++WN+II+ Y NG E
Sbjct: 36 IIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCME 95
Query: 100 SKNLFQSMP---------------------------------------VKNIVSWNCMIA 120
+ LF+ M V ++ N ++A
Sbjct: 96 ALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVA 155
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----IS 176
+ ++ A F + E++ T+N+MI+GF ++G EA + F + N+ +S
Sbjct: 156 MHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVS 215
Query: 177 YTAMLD-----GFMKKGEVDKARALS------------------------------DYMS 201
++L G++ G+ A A+ D M
Sbjct: 216 LISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMI 275
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMP----DYD---------------------- 235
K+++SWT +I Y +N EA +L ++ D D
Sbjct: 276 NKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKE 335
Query: 236 ----------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
++ + +I + G + A +FE I+ KD VS+ +MI+ Y NG+A
Sbjct: 336 VHGYTLKRGLSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLA 395
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EAL +F M + ++PD TLVS+ +A ++L LN+G++ H + R GF S N++
Sbjct: 396 NEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSL 455
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY+ CG + ++ F S +LV W T+I A+ HG + A+ FS M PD
Sbjct: 456 VDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDH 515
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
ITFL+LL AC H+G +NE L E M Y + P EHY CLVD+L RA LE+A+ +
Sbjct: 516 ITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVK 575
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
M E VW + L AC I+ N +LGE+AA+K+ +LDP + YV++SN++AA+G W+D
Sbjct: 576 SMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKD 635
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDD 585
V VR+ MK G+ K SWIE+GNKVH FL D SHP KI+ +L + + +++
Sbjct: 636 VEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGG 695
Query: 586 FV 587
+V
Sbjct: 696 YV 697
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 95/181 (52%), Gaps = 3/181 (1%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D T V AC ++ ++ G + H L+I+ G+++ V V N++++MY++C IL + F
Sbjct: 9 DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLF 68
Query: 363 RQIHSPN-LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
+++ N +VSWN+II+A++ +G +AL F +M G + T ++ L AC +
Sbjct: 69 DRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFK 128
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
M++ ++K ++ LV + R G++ A +I + E D W S++A
Sbjct: 129 KLGMEIHAAILKSNQVLDVYV-ANALVAMHVRFGKMSYAARIFDELD-EKDNITWNSMIA 186
Query: 482 A 482
Sbjct: 187 G 187
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 290/571 (50%), Gaps = 53/571 (9%)
Query: 47 TQYVFVNNAK----ISALSRAGKISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQ 98
T Y VN+ +S + G A QL + D N ++ Y + G L
Sbjct: 206 TSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLL 265
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISGFL 154
++ LF +MP + V+WN +IAG + N D+A F AM + ++ T+ + + L
Sbjct: 266 YARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSIL 325
Query: 155 KHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
+ G L + + R +V +A++D + K G+V+ AR + +V T
Sbjct: 326 ESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTA 385
Query: 211 MITGYVKNERFCEARELF------------------------------------YRMPDY 234
MI+GYV + +A F + +
Sbjct: 386 MISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKR 445
Query: 235 DKNVFVVTAMITG-FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+N+ V + IT + K G L+ A F R+ +D V +N+MI+ ++QNG E A+ LF
Sbjct: 446 LENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFR 505
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + D +L S +A + L L G++ H VIRN F ++ V + +I MYS+CG
Sbjct: 506 QMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCG 565
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ + F + N VSWN+IIAA+ HG + L + +M G PD +TFL ++S
Sbjct: 566 NLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIIS 625
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
ACGHAG V+E + F M + YGI EHY C+VD+ RAG++ +A+ + MPF D
Sbjct: 626 ACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDA 685
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
GVWG+LL AC ++ NVEL +LA++ + ELDP+NS YV+LSN++A AG W V +VR LM
Sbjct: 686 GVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLM 745
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
KE+GV K YSWI++ H F D +HP
Sbjct: 746 KEKGVQKIPGYSWIDVNGGTHMFSAADGNHP 776
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 227/454 (50%), Gaps = 59/454 (12%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ +A+I Y NG++++++ +F +P+++ + WN M+ G + + D+A F M
Sbjct: 146 DLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMR 205
Query: 140 ER----NTATY-----------------------------------NAMISGFLKHGRLE 160
N+ TY N +++ + K G L
Sbjct: 206 TSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLL 265
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDYMSFKNVVSWTV 210
A +LF MP+ + +++ ++ G+++ G D+A L D ++F + + ++
Sbjct: 266 YARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLP-SI 324
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ +G +++ + + + +R+P +V++ +A+I + K G +E AR +F++ D
Sbjct: 325 LESGSLRHCKEVHSYIVRHRVP---FDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVA 381
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
AMI+GY +G+ +A+ F +I+ M + T+ SV AC+A+ L G++ H +
Sbjct: 382 VCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHI 441
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ E V+V +A+ MY++CG + + FR++ + V WN++I++F+Q+G E A+
Sbjct: 442 LKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAI 501
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY--TCLV 448
F QMG++G D ++ S LSA + + ++ +++ SS+ + + L+
Sbjct: 502 DLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRN---AFSSDTFVASTLI 558
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
D+ S+ G L AW + M + + W S++AA
Sbjct: 559 DMYSKCGNLALAWCVFNLMDGKNEVS-WNSIIAA 591
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/475 (22%), Positives = 210/475 (44%), Gaps = 55/475 (11%)
Query: 59 ALSRAGKISAARQLFDQMTTK---DVITWNAIITG-YWQNGFLQESKNLFQSMPVKNIVS 114
A S A + ARQ+ Q+ DV ++ + G Y G +++ NLF + ++ +
Sbjct: 20 ACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALP 79
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAM------PERNTATY---------------------- 146
WN MI G D A ++ M P++ T Y
Sbjct: 80 WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTAR 139
Query: 147 -----------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+A+I + +G + +A R+F+++P R+ I + ML G++K G+ D A
Sbjct: 140 SLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIG 199
Query: 196 ----LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFC 249
+ S N V++T +++ FC +L + ++ + V ++ +
Sbjct: 200 TFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYS 259
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K G L AR LF + D V++N +IAGY QNG +EA LF+ MI ++PD T S
Sbjct: 260 KCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFAS 319
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ L ++ H ++R+ +V + +A+I +Y + G + + F+Q +
Sbjct: 320 FLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVD 379
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ +I+ + HG A+ F + G + +T S+L AC + +L
Sbjct: 380 VAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHC 439
Query: 430 LMVK--VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++K + I+ + + D+ ++ G+L+ A++ + M + D+ W S++++
Sbjct: 440 HILKKRLENIVNVG---SAITDMYAKCGRLDLAYEFFRRMS-DRDSVCWNSMISS 490
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 158/342 (46%), Gaps = 11/342 (3%)
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTV 210
GR +A LF ++ R + + M+ G G D A M NV + +
Sbjct: 60 GRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVI 119
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
G + N C R + ++F +A+I + G + +AR +F+ + +D +
Sbjct: 120 KACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTI 179
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+N M+ GY ++G + A+ F M + T + + C+ G Q H LV
Sbjct: 180 LWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLV 239
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
I +GFE + V N ++ MYS+CG +L + F + + V+WN +IA + Q+G ++A
Sbjct: 240 IGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAA 299
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVD 449
F+ M G PD +TF S L + +G + ++ +V+ +P + + L+D
Sbjct: 300 PLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHR--VPFDVYLKSALID 357
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVE 490
+ + G +E A +I Q D V ++++ V++ LN++
Sbjct: 358 VYFKGGDVEMARKIFQ-QNILVDVAVCTAMISGYVLHGLNID 398
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
L S+F ACS ++ + RQ H VI G + + V+ +Y CG D+ F ++
Sbjct: 14 LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELE 73
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+ WN +I G ++ AL+F+ +M + PD TF ++ ACG V M
Sbjct: 74 LRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 133
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+ + + G + L+ + + G + A ++ +P DT +W +L V
Sbjct: 134 VHD-TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLR-DTILWNVMLRGYV 189
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR + FV + I S+ G ++ A +F+ M K+ ++WN+II Y +G +E
Sbjct: 542 VIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPREC 601
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
+L+ M I V++ +I+ C +D+ YF M Y M+
Sbjct: 602 LDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVD 661
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ + GR+ EA + MP
Sbjct: 662 LYGRAGRVHEAFDTIKSMP 680
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 316/583 (54%), Gaps = 22/583 (3%)
Query: 17 FPPILRILS-TPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FP +LR PD H+ ++R + V V NA ++ ++ G + AAR++FD
Sbjct: 192 FPCVLRSCGGVPDWRMGREVHAH--VLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDS 249
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCM------IAGCIDNDRID 129
MT D I+WNA+I G+++NG LF +M + + V N M +A + +D +
Sbjct: 250 MTVMDCISWNAMIAGHFENGECNAGLELFLTM-LHDEVQPNLMTITSVTVASGLLSD-VT 307
Query: 130 DAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
A + +R + A N++I + G + +A +F +M R+ +++TAM+ G+
Sbjct: 308 FAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYE 367
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN------VF 239
K G DKA + M NV + I + + ++ ++ + ++ +
Sbjct: 368 KNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIV 427
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V A++ + K ++ A +F+ + KD VS+++MIAG+ N EAL F M+ D
Sbjct: 428 VTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-D 486
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++P+ T ++ AC+A L G++ H V+R G E + NA+I +Y +CG +
Sbjct: 487 VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAW 546
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + ++VSWN +IA F HGH + AL FF+QM G PD +TF++LL AC G
Sbjct: 547 AQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGG 606
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
V+E +LF M + Y I+P+ +HY C+VD+LSRAGQL +A+ MP D VWG+L
Sbjct: 607 MVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGAL 666
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
L C I+ +VELGELAAK + L+P ++ +V+L +LYA A +W + RVR M+E+G+
Sbjct: 667 LNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLD 726
Query: 540 KQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
SW+E+ VH FL D SHP I +I+ L+ +MK+
Sbjct: 727 HDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKA 769
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 179/346 (51%), Gaps = 8/346 (2%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV- 205
NAM+S ++ G A R+F +MP R+V S+ M+ G+ K G +D+A L M + V
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVR 186
Query: 206 -----VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
+ G V + R + + V V+ A++T + K G + AR +
Sbjct: 187 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKV 246
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ + DC+S+NAMIAG+ +NG L LF M+ ++QP+ T+ SV A L +
Sbjct: 247 FDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDV 306
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
++ H L ++ GF +V+ CN++I MY+ G + + F ++ + + ++W +I+ +
Sbjct: 307 TFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGY 366
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
++G +KAL ++ M +N PD IT S L+AC G ++ + L EL + G I
Sbjct: 367 EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHEL-AESKGFISY 425
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
++++ +++ +++KA ++ + M E D W S++A N
Sbjct: 426 IVVTNAILEMYAKSKRIDKAIEVFKCM-HEKDVVSWSSMIAGFCFN 470
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 215/429 (50%), Gaps = 26/429 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---- 107
+ NA +S L R G+ A ++F +M +DV +WN ++ GY ++G L E+ +L+ M
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184
Query: 108 PVKNIVSWNCMIAGC--IDNDRIDDAF--DYFQAMPERNTATYNAMISGFLKHGRLEEAT 163
++ ++ C++ C + + R+ + NA+++ + K G + A
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAAR 244
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVK 217
++F+ M + IS+ AM+ G + GE + L M V ++ + +G +
Sbjct: 245 KVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLS 304
Query: 218 NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ F + + +V ++I + +GM+ AR +F R+ +D +++ AMI+
Sbjct: 305 DVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMIS 364
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GY +NG ++AL +++ M ++ PDD T+ S AC+ L L+ G + H L GF +
Sbjct: 365 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFIS 424
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA-QHGHYEKALIFFSQM 396
+ V NA++ MY++ I + F+ +H ++VSW+++IA F H ++E AL +F M
Sbjct: 425 YIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFE-ALYYFRHM 483
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDL----FELMVKVYGIIPSSEHYTCLVDILS 452
L P+ +TF++ L+AC G + ++ ++ G +P++ L+D+
Sbjct: 484 -LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNA-----LIDLYV 537
Query: 453 RAGQLEKAW 461
+ GQ AW
Sbjct: 538 KCGQTGYAW 546
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 174/557 (31%), Positives = 299/557 (53%), Gaps = 27/557 (4%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T F+ N ++ S+ G++ A +LFD M +++++W A+I+G QN E+ F
Sbjct: 37 TPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCG 96
Query: 107 MPVKNIV----SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL-----KHG 157
M + V +++ I C I+ + + + L K G
Sbjct: 97 MRICGEVPTQFAFSSAIRACASLGSIEMG-KQMHCLALKFGIGSELFVGSNLEDMYSKCG 155
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI----- 212
+ +A ++FE+MP ++ +S+TAM+DG+ K GE ++A ++FK ++ V I
Sbjct: 156 AMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEA-----LLAFKKMIDEEVTIDQHVL 210
Query: 213 ------TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE-RIQ 265
G +K +F + ++ ++FV A+ + K G +E+A +F +
Sbjct: 211 CSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSE 270
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
++ VS+ +I GY + E+ L +F + + ++P++ T S+ AC+ L +G Q
Sbjct: 271 CRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQ 330
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H V++ F+ + V + ++ MY +CG + + AF +I P ++WN++++ F QHG
Sbjct: 331 LHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGL 390
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+ A+ F +M G P+ ITF+SLL+ C HAG V E +D F M K YG++P EHY+
Sbjct: 391 GKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYS 450
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C++D+L RAG+L++A + MPFE + W S L AC I+ + E+G+LAA+K+ +L+P+
Sbjct: 451 CVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPK 510
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
NS V+LSN+YA W DV VR+ M++ V K YSW+++G K H F D SHP
Sbjct: 511 NSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPR 570
Query: 566 IDKIHLELKRASVQMKS 582
I+ +L Q+K+
Sbjct: 571 KSAIYEKLDTLLDQIKA 587
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 8/264 (3%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
M D L V + + L G+Q H L+I G+ + N ++ MYS+CG + +
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + NLVSW +I+ +Q+ + +A+ F M + G P F S + AC G
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ + L +K +GI + L D+ S+ G + A ++ + MP + D W ++
Sbjct: 121 SIEMGKQMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAM 178
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
+ E LA KKM +D + + +L + A G + R + V
Sbjct: 179 IDGYSKIGEFEEALLAFKKM--IDEEVTIDQHVLCSTLGACGALKACKFGRSV--HSSVV 234
Query: 540 KQCAYSWIEIGNKVH--YFLGGDM 561
K S I +GN + Y GDM
Sbjct: 235 KLGFESDIFVGNALTDMYSKAGDM 258
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 129/306 (42%), Gaps = 64/306 (20%)
Query: 23 ILSTPDSCGNF-------TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFD- 74
+ ST +CG + HSS +++L +FV NA S+AG + +A +F
Sbjct: 210 LCSTLGACGALKACKFGRSVHSS--VVKLGFESDIFVGNALTDMYSKAGDMESASNVFGI 267
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGC-------- 122
++V+++ +I GY + +++ ++F + + I +++ +I C
Sbjct: 268 DSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQ 327
Query: 123 ------------IDNDR---------------IDDAFDYFQAMPERNTATYNAMISGFLK 155
D D ++ A F + + +N+++S F +
Sbjct: 328 GTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQ 387
Query: 156 HGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARAL-----SDYMSFKNVV 206
HG ++A ++FE+M R N I++ ++L G G V++ Y
Sbjct: 388 HGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEE 447
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV-GMLENARLLFE--- 262
++ +I + R EA+E RMP ++ N F + + G C++ G E +L E
Sbjct: 448 HYSCVIDLLGRAGRLKEAKEFINRMP-FEPNAFGWCSFL-GACRIHGDKEMGKLAAEKLV 505
Query: 263 RIQPKD 268
+++PK+
Sbjct: 506 KLEPKN 511
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 290/527 (55%), Gaps = 23/527 (4%)
Query: 74 DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV----SWNCMIAGCIDNDRID 129
D +V +NAII+G+ NGF +E +Q M + ++ ++ C I C+D I
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK 156
Query: 130 DAFDY-FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
F+ E + +A+++ +LK G +E A FE++P R+V+ + AM++G+ + G
Sbjct: 157 KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIG 216
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVK---------NERFCEARELFYRMPDYDKNVF 239
+ + M+ ++VV +TG + N R F YD V
Sbjct: 217 QFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHG---FAMKMGYDSGVA 273
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V ++I + K +E+A +FE ++ KD S+N++++ + Q G + LRL M+
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG 333
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN------VSVCNAVITMYSRCG 353
+QPD T+ +V ACS L L GR+ H +I +G + V + NAVI MY++CG
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D+ L F ++ + ++ SWN +I + HG+ +AL FS+M PD +TF+ +LS
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLS 453
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC HAG V++ + M Y + P+ EHYTC++D+L RAGQL++A+++ MP EA+
Sbjct: 454 ACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANP 513
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
VW +LLAAC ++ + L E+AA+++ EL+P++ YV++SN+Y A G + +V VR M
Sbjct: 514 VVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTM 573
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
++Q V K SWIE+ N VH F+ D +HP I+ L + ++
Sbjct: 574 RQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARL 620
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 174/361 (48%), Gaps = 28/361 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+ +A ++ + G + A+ F+++ +DV+ WNA++ GY Q G + F+ M
Sbjct: 171 VFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMND 230
Query: 110 KNIVSWNCMIAGC---------IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+++V + G ++N RI F + A N++I + K +E
Sbjct: 231 ESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGY-DSGVAVSNSLIDMYGKCKCIE 289
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYV 216
+A +FE M +++ S+ +++ + G+ D L D M + V+ T ++
Sbjct: 290 DALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACS 349
Query: 217 KNERFCEARELFYRM---------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
RE+ M D D +V + A+I + K G + +A L+FER+ K
Sbjct: 350 HLAALMHGREIHGYMIVSGLGKDGKDID-DVLLKNAVIDMYAKCGSMRDAHLVFERMSNK 408
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D S+N MI GY +G EAL +FS M ++ ++PD+ T V V +ACS +++GR +
Sbjct: 409 DVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR-NF 467
Query: 328 VLVIRNGFEANVSVCN--AVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHG 384
++ +++ ++ ++ + VI M R G + ++ ELA N V W ++AA H
Sbjct: 468 LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHK 527
Query: 385 H 385
H
Sbjct: 528 H 528
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 268/478 (56%), Gaps = 42/478 (8%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
Y A I+ ++ L E ++ +M R V T ++ +++ G +D AR + D M
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------------------------------ 231
++VVSWT MI+GY + ER EA +LF +M
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164
Query: 232 -------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+++ ++FV ++++ + K ++ AR +F+ + +D VS A+I+GYAQ G+
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 224
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EEAL LF + MQ + T ++ TA S L L+ G+Q H L++R V++ N+
Sbjct: 225 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 284
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+I MYS+CG +L S F + ++VSWN ++ + +HG + + F + PD
Sbjct: 285 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPD 343
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+T L++LS C H G V+E +D+F+ +VK + + HY C++D+L R+G+LEKA +
Sbjct: 344 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 403
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
+ MPFE+ +WGSLL AC ++ NV +GEL A+K+ E++P+N+ YV+LSN+YAAAGMW+
Sbjct: 404 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 463
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
DV +VR LM E+ VTK+ SWI + +H F + HP I+ ++K V +K+
Sbjct: 464 DVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKA 521
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 205/444 (46%), Gaps = 57/444 (12%)
Query: 43 RLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
R+ + +Y VF+ ++ R G + AR + D+M + V++W +I+GY Q E
Sbjct: 67 RMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVE 126
Query: 100 SKNLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMIS 151
+ +LF M + N + ++ C I + + N ++ ++++
Sbjct: 127 ALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLD 186
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG----EVDKARALSDYMSFKNVVS 207
+ K ++EA R+F+ +P R+V+S TA++ G+ +KG +D R L N V+
Sbjct: 187 MYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVT 246
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVV--TAMITGFCKVGMLENARLLFERIQ 265
+T ++T +++ + + FV ++I + K G L +R +F+ +
Sbjct: 247 FTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNML 306
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+ VS+NAM+ GY ++G+ E + LF + K +++PD TL++V + CS L++EG
Sbjct: 307 ERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEG-- 363
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+ + + V+ S +H+ + + II + G
Sbjct: 364 -------------LDIFDTVVKEQSAL------------LHTGH---YGCIIDLLGRSGR 395
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP-SSEH 443
EKAL M F+ + SLL AC +V+ ++ + EL+ K+ + P ++ +
Sbjct: 396 LEKALNLIENM---PFESTPSIWGSLLGAC----RVHANVHVGELVAQKLLEMEPENAGN 448
Query: 444 YTCLVDILSRAGQLEKAWQITQGM 467
Y L +I + AG + +++ + M
Sbjct: 449 YVILSNIYAAAGMWKDVFKVRKLM 472
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
LR SGM + TAC + L EGRQ H +I + V + ++TM
Sbjct: 27 LRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTM 86
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y RCG + D+ ++ ++VSW T+I+ ++Q + +AL F +M G P+ T
Sbjct: 87 YVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTL 146
Query: 409 LSLLSACGHAGKVNESMDLFELMVKV----YGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
++L++C + + + L+VK + + SS L+D+ +++ +++A ++
Sbjct: 147 ATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSS-----LLDMYAKSENIQEARRVF 201
Query: 465 QGMP 468
+P
Sbjct: 202 DTLP 205
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L++ ++FV ++ + +++ I AR++FD + +DV++ AII+GY Q G +E+
Sbjct: 169 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 228
Query: 101 KNLFQSMPVK----NIVSWNCMIA-----GCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
+LF+ + + N V++ ++ +D + A + +P A N++I
Sbjct: 229 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP-FFVALQNSLID 287
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ K G+L + R+F+ M R+V+S+ AML G+ + G
Sbjct: 288 MYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 324
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 306/554 (55%), Gaps = 15/554 (2%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L Y V N+ I+A + G++ +AR LFD+++ +DV++WN++I+G NGF +
Sbjct: 184 VLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNG 243
Query: 101 KNLFQSM-----PVKNIVSWNCMIA-GCIDNDRIDDAFDYF--QAMPERNTATYNAMISG 152
F M V + N ++A + N + A + +A N ++
Sbjct: 244 LEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDM 303
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSW 208
+ K G L A +F +M ++S+T+++ +++G +A L D M K ++ +
Sbjct: 304 YSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAV 363
Query: 209 TVMITGYVKNERFCEARELFYRMP--DYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
T ++ + + RE+ + + N+ V A++ + K G +E A L+F ++
Sbjct: 364 TSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPV 423
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K+ VS+N MI GY+QN + EAL+LF M K ++PDD T+ V AC+ L L +GR+
Sbjct: 424 KNIVSWNTMIGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMACVLPACAGLAALEKGREI 482
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H ++R G+ +++ V A++ MY +CG ++ ++ F I +++ W +IA + HG
Sbjct: 483 HGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFG 542
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++A+ F +M + G +P+ +F S+L AC H+G + E LF+ M I P EHY C
Sbjct: 543 KEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYAC 602
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VD+L R+G L +A++ + MP + D +WG+LL+ C I+ +VEL E A+ + EL+P+N
Sbjct: 603 MVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPEN 662
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
+ YV+L+N+YA A W +V +++ + + G+ SWIE+ K + F GD SHP
Sbjct: 663 TRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQA 722
Query: 567 DKIHLELKRASVQM 580
I L++ +++M
Sbjct: 723 KMIDSLLRKLTMKM 736
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 208/435 (47%), Gaps = 21/435 (4%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMI 119
G + R++FD + + WN +++ Y + G +ES LF+ M I ++ C++
Sbjct: 106 GDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVL 165
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNA----MISGFLKHGRLEEATRLFEQMPRRNVI 175
G + ++ + + + +YNA +I+ + K G +E A LF+++ R+V+
Sbjct: 166 KGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVV 225
Query: 176 SYTAM-----LDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT-GYVKNERFCEARELFY 229
S+ +M ++GF + G + L+ + + V++ V N A +
Sbjct: 226 SWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYG 285
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+ V ++ + K G L A +F ++ VS+ ++IA + + G+ EA+
Sbjct: 286 VKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAI 345
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF M ++PD + SV AC+ L++GR+ H + +N +N+ V NA++ MY
Sbjct: 346 GLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMY 405
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++CG + ++ L F Q+ N+VSWNT+I ++Q+ +AL F M PD +T
Sbjct: 406 AKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ-KQLKPDDVTMA 464
Query: 410 SLLSACGHAGKVNESMDLF-ELMVKVYGIIPSSEHYTC-LVDILSRAGQLEKAWQITQGM 467
+L AC + + ++ ++ K Y S H C LVD+ + G L A Q+ +
Sbjct: 465 CVLPACAGLAALEKGREIHGHILRKGY---FSDLHVACALVDMYVKCGLLVLAQQLFDMI 521
Query: 468 PFEADTGVWGSLLAA 482
P + D +W ++A
Sbjct: 522 P-KKDMILWTVMIAG 535
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 175/379 (46%), Gaps = 47/379 (12%)
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY----DKNVF 239
++ G++ K R + D + + W ++++ Y K + E+ LF +M + D F
Sbjct: 102 YVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTF 161
Query: 240 ---------------------------------VVTAMITGFCKVGMLENARLLFERIQP 266
VV ++I + K G +E+AR+LF+ +
Sbjct: 162 TCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSD 221
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+D VS+N+MI+G NG + L F M+ + + D ATLV+V AC+ + L GR
Sbjct: 222 RDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRAL 281
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H ++ GF V N ++ MYS+CG + + F ++ +VSW +IIAA + G +
Sbjct: 282 HAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLH 341
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK--VYGIIPSSEHY 444
+A+ F +M G PD S++ AC + +++ ++ + K + +P S
Sbjct: 342 YEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVS--- 398
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGELAAKKMRELD 503
L+++ ++ G +E+A I +P + + W +++ N L E +L ++L
Sbjct: 399 NALMNMYAKCGSMEEANLIFSQLPVK-NIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLK 457
Query: 504 PQNSAVYVMLSNLYAAAGM 522
P + + +L A AG+
Sbjct: 458 PDDVTMACVLP---ACAGL 473
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V NA I + + G A++L S + +++ + T SV C+ L+ L +G++ H +
Sbjct: 25 VDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDGKRVHSI 82
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ NG + + ++ MY CG ++ F I + + WN +++ +A+ G+Y ++
Sbjct: 83 ISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRES 142
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
+ F +M G D TF +L + KV E + ++K+ G + L+
Sbjct: 143 VGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKL-GFGSYNAVVNSLIA 201
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ G++E A + + + D W S+++ C +N
Sbjct: 202 AYFKCGEVESARILFDELS-DRDVVSWNSMISGCTMN 237
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 234/384 (60%), Gaps = 3/384 (0%)
Query: 200 MSFK-NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
M F+ +VV T ++ Y + +A +F +M + + AMITG + ++ A
Sbjct: 39 MGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTW--NAMITGHAQNRDMKKAL 96
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
LF + +D VS+ A+IAGYAQNG +E+L +F+ M K M+ D + SV +AC+ L
Sbjct: 97 KLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLA 156
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L GRQ H V+++GF ++ V +A++ MY++ G + D+ F ++ N VSWN+II
Sbjct: 157 ALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIIT 216
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
AQHG A++ F QM G P+ I+F+ +LSAC H G VNE F LM + YGI+
Sbjct: 217 GCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIV 276
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
P HYTC++D+L RAG L++A GMP E D VWG+LL AC I+ N EL + A+
Sbjct: 277 PDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEH 336
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ ++ Q + +YV+LSN+YAAAG W D +VR LMK++GV KQ YSWIE+ +H F+
Sbjct: 337 LLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVA 396
Query: 559 GDMSHPCIDKIHLELKRASVQMKS 582
G+ SHP + +IH L+ S +MK+
Sbjct: 397 GETSHPQLKEIHEFLESLSRKMKA 420
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 18/294 (6%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
+ N +I++ V V A + +R G + A +FD+M+ + TWNA+ITG+ QN
Sbjct: 31 QAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNR 90
Query: 96 FLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK 155
++++ LF M +++VSW +IAG N D++ + F M + + ++ L
Sbjct: 91 DMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLS 150
Query: 156 HGRLEEATRLFEQMPRR--------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
A L Q +++ +A++D + K G ++ A + D M +N VS
Sbjct: 151 ACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVS 210
Query: 208 WTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
W +ITG ++ R +A LF +M N +++ G++ R F +
Sbjct: 211 WNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMT 270
Query: 266 PK-----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
D + MI + G +EA +G M ++PD + ++ AC
Sbjct: 271 QNYGIVPDVSHYTCMIDLLGRAGCLDEAENFING---MPVEPDVSVWGALLGAC 321
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 33/220 (15%)
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M+ ++P+ TL +V AC+++ L +G+Q+H +I+ GFE++V V A++ MY+RCG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 355 ILDSELAFRQI--------------HSPN-----------------LVSWNTIIAAFAQH 383
+ D+ F ++ H+ N +VSW +IA +AQ+
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G+ +++L F+QM G D S+LSAC + E F V G
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAAL-ELGRQFHAYVVQSGFALDIVV 179
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ LVD+ +++G +E A Q+ MP + W S++ C
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEVS-WNSIITGC 218
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 277/530 (52%), Gaps = 45/530 (8%)
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH 156
+ E++ +F MP +++VSWN ++AG N A + ++M E N I L
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 157 G---RLEEATRLFEQMPRRN-----VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
RL + R+ V TA++D + K G ++ AR L D M +NVVSW
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 209 TVMITGYVKNERFCEARELFYRMPD----------------------------------- 233
MI YV+NE EA +F +M D
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 234 --YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
D+NV VV ++I+ +CK ++ A +F ++Q + VS+NAMI G+AQNG +AL
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
FS M ++PD T VSV TA + L + + + H +V+R+ + NV V A++ MY++
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG I+ + L F + ++ +WN +I + HG + AL F +M P+G+TFLS+
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+SAC H+G V + F +M + Y I S +HY +VD+L RAG+L +AW MP +
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
V+G++L AC I+ NV E AA+++ EL+P + +V+L+N+Y AA MW V +VR+
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 665
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
M QG+ K S +EI N+VH F G +HP KI+ L++ +K
Sbjct: 666 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 161/292 (55%), Gaps = 6/292 (2%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV--- 205
++S F ++G ++EA R+FE + + + Y ML GF K ++DKA M + +V
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 206 ---VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
++ + + G R + + ++F +T + + K + AR +F+
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
R+ +D VS+N ++AGY+QNG+A AL + M + +++P T+VSV A SAL+L++
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G++ H +R+GF++ V++ A++ MY++CG + + F + N+VSWN++I A+ Q
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+ + ++A++ F +M G P ++ + L AC G + + +L V++
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 191/383 (49%), Gaps = 18/383 (4%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q F +S R G + A ++F+ + +K + ++ ++ G+ + L ++ F M
Sbjct: 67 QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM 126
Query: 108 ------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG----FLKHG 157
PV + ++ ++ C D + + + + + ++G + K
Sbjct: 127 RYDDVEPV--VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCR 184
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY-- 215
++ EA ++F++MP R+++S+ ++ G+ + G A + M +N+ + I
Sbjct: 185 QVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLP 244
Query: 216 -VKNERFCE-ARELF-YRM-PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
V R +E+ Y M +D V + TA++ + K G LE AR LF+ + ++ VS
Sbjct: 245 AVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS 304
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N+MI Y QN +EA+ +F M+ ++P D +++ AC+ L L GR H L +
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
G + NVSV N++I+MY +C + + F ++ S LVSWN +I FAQ+G AL
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALN 424
Query: 392 FFSQMGLNGFDPDGITFLSLLSA 414
+FSQM PD T++S+++A
Sbjct: 425 YFSQMRSRTVKPDTFTYVSVITA 447
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 162/325 (49%), Gaps = 27/325 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V ++ A + ++ G + ARQLFD M ++V++WN++I Y QN +E+ +FQ M
Sbjct: 271 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 110 KNIVSWNCMIAG----CIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEE 161
+ + + + G C D ++ + E RN + N++IS + K ++
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGE-VD--------KARALS-DYMSFKNVVSWT-- 209
A +F ++ R ++S+ AM+ GF + G +D ++R + D ++ +V++
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
+ IT + K R DKNVFV TA++ + K G + ARL+F+ + +
Sbjct: 451 LSITHHAKWIHGVVMRSCL------DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHV 504
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
++NAMI GY +G + AL LF M K ++P+ T +SV +ACS L+ G + +
Sbjct: 505 TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYM 564
Query: 330 VIRN-GFEANVSVCNAVITMYSRCG 353
+ N E ++ A++ + R G
Sbjct: 565 MKENYSIELSMDHYGAMVDLLGRAG 589
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A + ++ G I AR +FD M+ + V TWNA+I GY +GF + + LF+ M
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLE 160
I V++ +I+ C + ++ F M E + Y AM+ + GRL
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLN 592
Query: 161 EATRLFEQMPRRNVIS-YTAML 181
EA QMP + ++ Y AML
Sbjct: 593 EAWDFIMQMPVKPAVNVYGAML 614
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
CS+L+ E RQ LV +NG +++++ R G + ++ F I S V +
Sbjct: 47 CSSLK---ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+T++ FA+ +KAL FF +M + +P F LL CG ++ ++ L+VK
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G T L ++ ++ Q+ +A ++ MP E D W +++A
Sbjct: 164 -SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAG 210
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 290/540 (53%), Gaps = 34/540 (6%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
++ AR++FD+M KD I WN +I+GY +N ES +F +++++ +C +D
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF-----RDLINESCTR---LD 220
Query: 125 NDRIDDAFDYFQAMPERNTA-------------TYNAMISGFL----KHGRLEEATRLFE 167
+ D + E +++ +++GF+ K G+++ + LF
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR 280
Query: 168 QMPRRNVISYTAMLDGFMKKGEVD------KARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ + ++++Y AM+ G+ GE + K LS + + V ++G++
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---L 337
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
A + ++ + V TA+ T + K+ +E+AR LF+ K S+NAMI+GY Q
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG+ E+A+ LF M K + P+ T+ + +AC+ L L+ G+ H LV FE+++ V
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
A+I MY++CG I ++ F + N V+WNT+I+ + HG ++AL F +M +G
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
P +TFL +L AC HAG V E ++F M+ YG PS +HY C+VDIL RAG L++A
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRAL 577
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
Q + M E + VW +LL AC I+ + L ++K+ ELDP N +V+LSN+++A
Sbjct: 578 QFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADR 637
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+ VR K++ + K Y+ IEIG H F GD SHP + +I+ +L++ +M+
Sbjct: 638 NYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMR 697
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 184/441 (41%), Gaps = 80/441 (18%)
Query: 46 STQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQN----GFLQESK 101
+T + N + R+ IS Q Q+ +++T Q G + ++
Sbjct: 13 TTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYAR 72
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS---GF 153
++F S+ ++ +N ++ G N+ + F + + N++TY IS GF
Sbjct: 73 DIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGF 132
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDG--------------FMKKGEVDKARALSDY 199
R + A R VI A++DG + K V+ AR + D
Sbjct: 133 ----RDDRAGR---------VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDR 179
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------------------------ 235
M K+ + W MI+GY KNE + E+ ++F + +
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 236 --------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
+ +V+T I+ + K G ++ LF + D V++NAMI GY
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG E +L LF ++ + +TLVS+ L L+ H +++ F ++ SV
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASV 356
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
A+ T+YS+ I + F + +L SWN +I+ + Q+G E A+ F +M + F
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 402 DPDGITFLSLLSACGHAGKVN 422
P+ +T +LSAC G ++
Sbjct: 417 SPNPVTITCILSACAQLGALS 437
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 18/259 (6%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D + + + ++ + K +E+AR +F+R+ KD + +N MI+GY +N + E++++F
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 295 MIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
+I + D TL+ + A + LQ L G Q H L + G ++ V I++YS+CG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I FR+ P++V++N +I + +G E +L F ++ L+G T +SL+
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 414 ACGHAGKVNESMDLFELMVKVYG------IIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
GH L+ ++G + + T L + S+ ++E A ++
Sbjct: 331 VSGH----------LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDES 380
Query: 468 PFEADTGVWGSLLAACVIN 486
P E W ++++ N
Sbjct: 381 P-EKSLPSWNAMISGYTQN 398
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 160/410 (39%), Gaps = 83/410 (20%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
+V IS S+ GKI LF + D++ +NA+I GY NG + S +LF+ +
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 108 -------------PVKNIVSWNCMIAG-CIDN-------------------DRIDDAFDY 134
PV + I G C+ + + I+ A
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKL 376
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEV 190
F PE++ ++NAMISG+ ++G E+A LF +M + N ++ T +L + G +
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL 436
Query: 191 DKARALSDYMSFKNVVS----WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
+ + D + + S T +I Y K EAR LF M KN MI+
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT--KKNEVTWNTMIS 494
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
G+ G + A +F + L SG+ P T
Sbjct: 495 GYGLHGQGQEALNIFYEM--------------------------LNSGI-----TPTPVT 523
Query: 307 LVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
+ V ACS L+ EG + + ++ R GFE +V ++ + R G L L F +
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGH-LQRALQFIEA 582
Query: 366 HS--PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
S P W T++ A H A + L DPD + + LLS
Sbjct: 583 MSIEPGSSVWETLLGACRIHKDTNLARTVSEK--LFELDPDNVGYHVLLS 630
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ A I ++ G I+ AR+LFD MT K+ +TWN +I+GY +G QE+ N+F M
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
I V++ C++ C + + + F +M R + Y M+ + G L+
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 161 EATRLFEQM 169
A + E M
Sbjct: 575 RALQFIEAM 583
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 104/227 (45%), Gaps = 3/227 (1%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ ++ ++T + +G + AR +F +Q D FN ++ G++ N +L +F+
Sbjct: 48 FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFA 107
Query: 294 GMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ K D++P+ +T +A S + GR H + +G ++ + + + ++ MY +
Sbjct: 108 HLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKF 167
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY-EKALIFFSQMGLNGFDPDGITFLSL 411
+ D+ F ++ + + WNT+I+ + ++ Y E +F + + D T L +
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDI 227
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
L A ++ M + L K G T + + S+ G+++
Sbjct: 228 LPAVAELQELRLGMQIHSLATKT-GCYSHDYVLTGFISLYSKCGKIK 273
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 291/543 (53%), Gaps = 45/543 (8%)
Query: 86 AIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT 145
A++ Y + +++++ LF M +++V+W MI G + + +++ F+ M E
Sbjct: 70 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 129
Query: 146 YN-AMISGFL---KHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALS 197
AM++ K G + +A + + + R+ +VI TAM+D + K G V+ AR +
Sbjct: 130 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 189
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------------ 233
D M KNV+SW+ MI Y + + +A +LF M PD
Sbjct: 190 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQ 249
Query: 234 -------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
D + FV A++ + K +E+AR LF+++ +D V++ MI GYA
Sbjct: 250 MGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYA 309
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
+ G A E+L LF M + + PD +V+V AC+ L +++ R + R F+ +V
Sbjct: 310 ECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVI 369
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
+ A+I M+++CG + + F ++ N++SW+ +IAA+ HG KAL F M +G
Sbjct: 370 LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG 429
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
P+ IT +SLL AC HAG V E + F LM + Y + +HYTC+VD+L RAG+L++A
Sbjct: 430 ILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEA 489
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
++ + M E D G+WG+ L AC + +V L E AA + EL PQN Y++LSN+YA A
Sbjct: 490 LKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANA 549
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
G W DV + R LM ++ + K ++WIE+ NK H F GD +HP +I+ LK ++
Sbjct: 550 GRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL 609
Query: 581 KSV 583
+ V
Sbjct: 610 ELV 612
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 140/269 (52%), Gaps = 6/269 (2%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D + FV A++ + K +E+AR LF+++Q +D V++ MI GYA+ G A E+L LF
Sbjct: 62 DLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK 121
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + + PD +V+V AC+ L +++ R + R F+ +V + A+I MY++CG
Sbjct: 122 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 181
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F ++ N++SW+ +IAA+ HG KAL F M +G PD IT SLL A
Sbjct: 182 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYA 241
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEAD 472
C + + ++ K +G+ +H+ C LVD+ + ++E A + MP E D
Sbjct: 242 CSDLKNLQMGRLIHHIVYK-FGL--DLDHFVCAALVDMYGKCREIEDARFLFDKMP-ERD 297
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRE 501
W ++ N + KMRE
Sbjct: 298 LVTWTVMIGGYAECGNANESLVLFDKMRE 326
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 170/319 (53%), Gaps = 15/319 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V + A I ++ G + +AR++FD+M K+VI+W+A+I Y +G +++ +LF+ M
Sbjct: 166 VILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLS 225
Query: 108 --PVKNIVSWNCMIAGCID--NDRIDDAFDY--FQAMPERNTATYNAMISGFLKHGRLEE 161
+ + ++ ++ C D N ++ + ++ + + A++ + K +E+
Sbjct: 226 SGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIED 285
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV----K 217
A LF++MP R+++++T M+ G+ + G +++ L D M + VV V + V K
Sbjct: 286 ARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAK 345
Query: 218 NERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+AR + + + + +V + TAMI K G +E+AR +F+R++ K+ +S++AM
Sbjct: 346 LGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAM 405
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-G 334
IA Y +G +AL LF M++ + P+ TLVS+ ACS L+ EG + L+ +
Sbjct: 406 IAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYS 465
Query: 335 FEANVSVCNAVITMYSRCG 353
A+V V+ + R G
Sbjct: 466 VRADVKHYTCVVDLLGRAG 484
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
M+ G+A+ G F +I+ +PD+ TL V AC L+ L GR H +V + G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ + VC A++ MY +C I D+ F ++ +LV+W +I +A+ G ++L+ F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDL--------FELMVKVYGIIPSSEHYTC 446
+M G PD + ++++ AC G ++++ + F+L V + G T
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV-ILG--------TA 171
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++D+ ++ G +E A +I M E + W +++AA
Sbjct: 172 MIDMYAKCGCVESAREIFDRME-EKNVISWSAMIAA 206
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF----Q 105
V + A I ++ G + +AR++FD+M K+VI+W+A+I Y +G +++ +LF +
Sbjct: 368 VILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLR 427
Query: 106 SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE-----RNTATYNAMISGFLKHGRLE 160
S + N ++ ++ C +++ +F M E + Y ++ + GRL+
Sbjct: 428 SGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLD 487
Query: 161 EATRLFEQM 169
EA +L E M
Sbjct: 488 EALKLIESM 496
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 302/556 (54%), Gaps = 20/556 (3%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
N +++L V+V N I+ S ++ A ++F++ + D ++WN+I+ GY + G ++
Sbjct: 237 NHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVE 296
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
E+K+++ MP ++I++ N MI + +A F M E++ T++A+I+ F ++
Sbjct: 297 EAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEM 356
Query: 159 LEEATRLFEQMPR-----RNVISYTAMLDG----FMKKGEVDKARAL----SDYMSFKNV 205
EEA R F M + V++ +A+ + G++ + +L Y++ +N
Sbjct: 357 YEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNA 416
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+I Y K AR+LF Y ++ +MI+G+ K +++NA+ +F+ +
Sbjct: 417 -----LIYMYSKCGDIMVARKLFDEA--YLLDLISWNSMISGYLKCNLVDNAKAIFDSMP 469
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
KD VS+++MI+GYAQN + +E L LF M +PD+ TLVSV +AC+ L L +G+
Sbjct: 470 EKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKW 529
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H + RNG NV + +I MY +CG + + F + + +WN +I A +G
Sbjct: 530 VHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGL 589
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E +L FS M P+ ITF+ +L AC H G V+E F M+ + I P+ +HY
Sbjct: 590 VESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYG 649
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C+VD+L RAG+L++A ++ MP D WG+LL AC + + E+G +K+ EL P
Sbjct: 650 CMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPD 709
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
+ +V+LSN+YA+ G W DV +R +M + V K S IE +H FL GD +HP
Sbjct: 710 HDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPD 769
Query: 566 IDKIHLELKRASVQMK 581
+D I L ++++K
Sbjct: 770 MDAIEDMLVEMAMKLK 785
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 26/267 (9%)
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
Y Q A L+ M+ + D+ T + ACS + E +Q H V++ GF++
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+V V N +I +S C + D+ F + + VSWN+I+A + + G+ E+A + QM
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
I S++ G G V E+ LF+ M++ + ++ L+ +
Sbjct: 307 ERSI----IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVT-----WSALIACFQQNEMY 357
Query: 458 EKAWQITQGMP---FEADTGVWGSLLAAC----VINLNVELGELAAKKMRE--LDPQNSA 508
E+A + GM D V S L+AC V+N+ + L+ K E ++ QN+
Sbjct: 358 EEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNAL 417
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKE 535
+Y +Y+ G D+ R L E
Sbjct: 418 IY-----MYSKCG---DIMVARKLFDE 436
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 178/487 (36%), Positives = 266/487 (54%), Gaps = 10/487 (2%)
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFD-YFQAM---PERNTATYNAMISGFLKHGR 158
+F+ +P N+ +N +I GC+ N+ A Y++ M N TY +
Sbjct: 86 VFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEA 145
Query: 159 LEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
EE ++ + ++ +V +A + + GEV+ AR + +V+ + MI G
Sbjct: 146 AEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDG 205
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
Y+K A+ELF+ M D KNV M++G K GM+E AR LF ++ K+ +S++A
Sbjct: 206 YLKCGEVEAAKELFWSMED--KNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSA 263
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI GY + G +EAL +F+ M + +++P L SV AC+ L L++GR H V N
Sbjct: 264 MIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNS 323
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ + A++ MY++CG + + F ++ + +WN +I HG E A+ F
Sbjct: 324 NSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFF 383
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M F P+GIT L +LSAC H+G V+E + +F M +VYGI P EHY C+VD+L RA
Sbjct: 384 KMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRA 443
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G L +A ++ MP E VWG+LL AC + +VELGE K + EL+PQNS Y +LS
Sbjct: 444 GLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLS 503
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+YA AG W DV VR LMKE+GV S I+ VH F GD SHP + I+L LK
Sbjct: 504 NIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLK 563
Query: 575 RASVQMK 581
++K
Sbjct: 564 NMIKRLK 570
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 165/346 (47%), Gaps = 39/346 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + +A I G++ AR++ + DVI +NA+I GY + G
Sbjct: 165 VHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCG-------------- 210
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
++ A + F +M ++N ++N M+SG K G +EEA LF +M
Sbjct: 211 -----------------EVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEM 253
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV---KNERFCEARE 226
+N IS++AM+DG++K G +A + + M + + +++ + N +
Sbjct: 254 KEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGR 313
Query: 227 LFYRMPDYDKNVF---VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
+ + + N F + TA++ + K G L+ A +FE+++ K+ ++NAMI G +G
Sbjct: 314 WIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHG 373
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVC 342
AE+A+ LF M K +P+ TL+ V +AC+ +++EG R + + G E +
Sbjct: 374 RAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHY 433
Query: 343 NAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
V+ + R G + ++ E+ + P+ W ++ A +HG E
Sbjct: 434 GCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVE 479
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 279/484 (57%), Gaps = 16/484 (3%)
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+K +F M VKNI +WN +I+ + + + + A F+ MP+R+ ++N+MISG+ + G
Sbjct: 196 AKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYN 255
Query: 160 EEATRLFEQM---PRRNVISYT--AMLDGFMKKGEVDKARALSDY-MSFKNVVSWTV--- 210
EA +F +M P ++T ++L +++ + + Y + + S V
Sbjct: 256 LEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNA 315
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+I+ Y K+ AR + + N+ T+++ G+ K+G ++ AR +F +++ +D V
Sbjct: 316 LISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVV 375
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++ AMI GY QNG+ +AL LF M+ +P+ TL ++ + S+L +L G+Q H
Sbjct: 376 AWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASA 435
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN----LVSWNTIIAAFAQHGHY 386
I+ G + SV NA+I MY++ G I +A R PN +VSW ++I A AQHG
Sbjct: 436 IKAGESSTPSVTNALIAMYAKTGNI---NVAKRVFDLPNGKKEIVSWTSMIMALAQHGLG 492
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++A+ F +M G PD IT++ +LSAC H G V + + +M +V+ I P+ HY C
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
++D+ RAG L++A+ + MP E D WGSLLA+C I+ N +L ++AA+++ +DP N
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
S Y+ L+N+Y+A G W + + R LMK++GV K+ SWI I N+VH F D+ HP
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQK 672
Query: 567 DKIH 570
D+I+
Sbjct: 673 DEIY 676
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 140/582 (24%), Positives = 256/582 (43%), Gaps = 135/582 (23%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L V V + ++ ++ G A+ +FD+MT K++ TWNA+I+ Y Q+G + +
Sbjct: 168 VVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELA 227
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM---------------------- 138
+ F+ MP ++IVSWN MI+G +A F M
Sbjct: 228 ASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACAN 287
Query: 139 ------------------PERNTATYNAMISGFLKHGRLEEATRLFE--QMPRRNVISYT 178
E + A NA+IS + K G +E A + E + N+I++T
Sbjct: 288 LEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFT 347
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------ 232
++LDG+ K G V AR + + + ++VV+WT MI GYV+N + +A ELF M
Sbjct: 348 SLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEP 407
Query: 233 ------------------DYDKNVF-------------VVTAMITGFCKVGMLENARLLF 261
++ K + V A+I + K G + A+ +F
Sbjct: 408 NSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF 467
Query: 262 ERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
+ K+ VS+ +MI AQ+G+ +EA+ LF M+ + M+PD T V V +AC+ + L+
Sbjct: 468 DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLV 527
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIA 378
+GR+ + ++ ++H P L + +I
Sbjct: 528 EQGRKYYNMMT--------------------------------EVHEIEPTLSHYACMID 555
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+ + G ++A +F M + +PD I + SLL++C K++++ DL ++ + +I
Sbjct: 556 LYGRAGLLQEAYLFIESMPI---EPDNIAWGSLLASC----KIHKNADLAKVAAERLLLI 608
Query: 439 P--SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
+S Y L ++ S G+ E A Q + M D GV I++ E+
Sbjct: 609 DPGNSGAYLALANVYSACGKWENAAQTRKLM---KDRGVRKE-KGISWIHIKNEVHAFGV 664
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
+ + + PQ +Y ++ A +W ++ ++ + + V
Sbjct: 665 EDV--IHPQKDEIYKLM------AEIWEEIKKMGFIPDTESV 698
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 212/425 (49%), Gaps = 49/425 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V++ N ++ ++ G + A +FD+M K +WN +I+GY + G + S+ L MP
Sbjct: 45 VYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPD 104
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM-PER---NTATYNAMISGFLKHGRLEEATRL 165
+ VSW +I G D+A F M ER + T + ++S + L+ ++
Sbjct: 105 CDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKI 164
Query: 166 FEQMPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ + + S T++L+ + K G+ A+ + D M+ KN+ +W +I+ Y+++ +F
Sbjct: 165 HSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQF 224
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
A F +MPD +D VS+N+MI+GY+Q
Sbjct: 225 ELAASQFEKMPD---------------------------------RDIVSWNSMISGYSQ 251
Query: 282 NGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
G EAL +FS M+ + ++PD+ TL S+ +AC+ L+ LN G+Q H ++R E + +
Sbjct: 252 QGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNL--VSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V NA+I+MY++ GG+ + L + NL +++ +++ + + G+ + A F+++
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLR- 370
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
D D + + +++ G N++++LF LMV G P+S ++ + S LE
Sbjct: 371 ---DRDVVAWTAMIVGYVQNGLWNDALELFRLMVN-EGPEPNSYTLAAMLSVSSSLTILE 426
Query: 459 KAWQI 463
QI
Sbjct: 427 HGKQI 431
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GR H +I+ G V + N ++T Y++ G + + F ++ + SWNT+I+ +A+
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
G++E + +M D D +++ +++ G + ++ +F M+
Sbjct: 89 QGNFEVSRRLLYEMP----DCDPVSWTAIIVGYNQFGLFDNAIWMFAKMI 134
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 290/531 (54%), Gaps = 62/531 (11%)
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNT-----ATYNAMISGFLKHGR- 158
N+ SWN +IA + +A F +M P R+T + +A++ L GR
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLD--LHSGRQ 173
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
+ +F P ++ +A++D + K GE+ AR L D +S +N+VSWT MITGYV+N
Sbjct: 174 AHQQALIFGFEP--DLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231
Query: 219 ERFCEARELFYRM---------------------------------------------PD 233
+ A LF
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ ++ V ++ + K G L +R +F+ + +D +S+N++IA YAQNG++ E++ +F
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 351
Query: 294 GMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M+K ++ + TL +V AC+ G+ H VI+ G E+NV V ++I MY +C
Sbjct: 352 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKC 411
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + + AF ++ N+ SW+ ++A + HGH ++AL F +M + G P+ ITF+S+L
Sbjct: 412 GKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVL 471
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
+AC HAG + E F+ M + + P EHY C+VD+L RAG L++A+ + +GM D
Sbjct: 472 AACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPD 531
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
VWG+LL AC ++ NV+LGE++A+K+ ELDP+N YV+LSN+YA AG W DV R+R+L
Sbjct: 532 FVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRIL 591
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
MK G+ K +S ++I +VH FL GD HP +KI+ L++ S++++ V
Sbjct: 592 MKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEV 642
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 198/448 (44%), Gaps = 67/448 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV++A + S+ G++ AR LFD+++ +++++W ++ITGY QN + LF+ V
Sbjct: 187 LFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLV 246
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ S D + D + + + ++ G HG L R FE
Sbjct: 247 EESGSEG-------DGEVCVDPIAMVSVLSACSRVSEKSITEGV--HGFL--IKRGFEG- 294
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
++ ++D + K GE+ +R + D M+ ++V+SW +I Y +N E+ E+F+
Sbjct: 295 ---DLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 351
Query: 230 RMPD--------------------------------------YDKNVFVVTAMITGFCKV 251
RM + NVFV T++I +CK
Sbjct: 352 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKC 411
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G +E AR F+R++ K+ S++AM+AGY +G A+EAL +F M ++P+ T VSV
Sbjct: 412 GKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVL 471
Query: 312 TACSALQLLNEG-----RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQI 365
ACS LL EG SH + G E ++ + R G + ++ +L
Sbjct: 472 AACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY----GCMVDLLGRAGYLKEAFDLIKGMK 527
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
P+ V W ++ A H + + I S L DP + LLS E +
Sbjct: 528 LRPDFVVWGALLGACRMHKNVDLGEI--SARKLFELDPKNCGYYVLLSNIYADAGRWEDV 585
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSR 453
+ +++K G++ LVDI R
Sbjct: 586 ERMRILMKNSGLVKPPGF--SLVDIKGR 611
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I++ VFV + I + GK+ AR+ FD+M K+V +W+A++ GY +G +E+
Sbjct: 389 VIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEA 448
Query: 101 KNLFQSMPV----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
+F M + N +++ ++A C +++ + +F+AM E Y M+
Sbjct: 449 LEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVD 508
Query: 152 GFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVD 191
+ G L+EA L + M R + + + A+L VD
Sbjct: 509 LLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVD 549
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 259/428 (60%), Gaps = 6/428 (1%)
Query: 147 NAMISGFLKHGRL--EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
NA+I + + G L +A +LFE+M R+ +S+ +ML G +K GE+ AR L D M ++
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRD 215
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
++SW M+ GY + A ELF +MP+ +N + M+ G+ K G +E AR++F+++
Sbjct: 216 LISWNTMLDGYARCREMSRAFELFEKMPE--RNTVSWSTMVMGYSKAGDMEMARVMFDKM 273
Query: 265 Q--PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
K+ V++ +IAGYA+ G+ +EA +L M+ ++ D A +S+ AC+ LL+
Sbjct: 274 PFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAESGLLSL 333
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G ++H ++ ++ +N SV NA++ MY++CG + + F + +LVSWNT++
Sbjct: 334 GMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTMLHGLGV 393
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HGH ++A+ FS+M G PD +TF+++L +C HAG ++E +D F M KVY ++P E
Sbjct: 394 HGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPKVE 453
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HY CLVD+L R G+L++A ++ Q MP E + +WG+LL AC ++ V++ + + +L
Sbjct: 454 HYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKL 513
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
DP + Y +LSN+YAAA W V +R MK GV K S +E+ + +H F D S
Sbjct: 514 DPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKS 573
Query: 563 HPCIDKIH 570
HP D+I+
Sbjct: 574 HPKSDQIY 581
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 197/394 (50%), Gaps = 17/394 (4%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISA--ARQLFDQMTTKDVITWNAIITGYWQNGF 96
N + +L + ++V NA I SR G + A +LF++M+ +D ++WN+++ G + G
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH 156
L++++ LF MP ++++SWN M+ G + AF+ F+ MPERNT +++ M+ G+ K
Sbjct: 201 LRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 157 GRLEEATRLFEQM--PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
G +E A +F++M P +NV+++T ++ G+ +KG + +A L D M +
Sbjct: 261 GDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAIS 320
Query: 215 YVKNERFCEARELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+ L R + + N V+ A++ + K G L+ A +F + KD
Sbjct: 321 ILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKD 380
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
VS+N M+ G +G +EA+ LFS M K + PD T ++V +C+ L++EG +
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEG-IDYF 439
Query: 329 LVIRNGFE--ANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAFAQHG 384
+ ++ V ++ + R GG L + Q PN+V W ++ A H
Sbjct: 440 YSMEKVYDLVPKVEHYGCLVDLLGR-GGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHN 498
Query: 385 HYEKAL-IFFSQMGLNGFDPDGITFLSLLSACGH 417
+ A + + + L+ DP T LS + A
Sbjct: 499 EVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAE 532
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 57/336 (16%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT 89
CG + L S + N+ + L +AG++ AR+LFD+M +D+I+WN ++
Sbjct: 165 CGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLD 224
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM--PERNTATYN 147
GY + + + LF+ MP +N VSW+ M+ G ++ A F M P +N T+
Sbjct: 225 GYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWT 284
Query: 148 AMISGFLKHGRLEEATRLFEQMP------------------------------------- 170
+I+G+ + G L+EA +L +QM
Sbjct: 285 IIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAESGLLSLGMRAHSIIKKS 344
Query: 171 --RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
N A+LD + K G + KA + + M K++VSW M+ G + EA ELF
Sbjct: 345 NLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 229 YRMPDY----DKNVFVVTAMITGFCKVGMLENARLLFERIQ------PKDCVSFNAMIAG 278
RM DK F+ A++ G+++ F ++ PK + ++
Sbjct: 405 SRMRKEGIWPDKVTFI--AVLCSCNHAGLIDEGIDYFYSMEKVYDLVPK-VEHYGCLVDL 461
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ G +EA+++ M M+P+ ++ AC
Sbjct: 462 LGRGGRLKEAIKVVQ---TMPMEPNVVIWGALLGAC 494
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 116/250 (46%), Gaps = 12/250 (4%)
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+++ + +I+ A +F ++Q + N++I +A N +A +FS M
Sbjct: 49 QDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAFFVFSEM 108
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG-- 353
+ + D+ T + ACS L L + H + + G +++ V NA+I YSRCG
Sbjct: 109 QRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGL 168
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
G+ D+ F ++ + VSWN+++ + G A F +M D I++ ++L
Sbjct: 169 GVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQR----DLISWNTMLD 224
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
+++ + +LFE M + + ++ +V S+AG +E A + MPF A
Sbjct: 225 GYARCREMSRAFELFEKMPERNTV-----SWSTMVMGYSKAGDMEMARVMFDKMPFPAKN 279
Query: 474 GV-WGSLLAA 482
V W ++A
Sbjct: 280 VVTWTIIIAG 289
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 44/259 (16%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
LN+ +Q H +IR ++ + +I+ S C + F Q+ PN+ N++I A
Sbjct: 32 LNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRA 91
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG-------------HAGKVNESMD 426
A + +A FS+M G D T+ LL AC H K+ S D
Sbjct: 92 HALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLSSD 151
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQL--EKAWQITQGMPFEADTGVWGSLLAACV 484
++ +P++ L+D SR G L A ++ + M E DT W S+L
Sbjct: 152 IY---------VPNA-----LIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGGL- 195
Query: 485 INLNVELGELA-AKKMRELDPQNSAV-YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
V+ GEL A+K+ + PQ + + + + YA R+++R L ++
Sbjct: 196 ----VKAGELRDARKLFDEMPQRDLISWNTMLDGYARC---REMSRAFELFEKMPERNTV 248
Query: 543 AYSWIEIGNKVHYFLGGDM 561
++S + +G Y GDM
Sbjct: 249 SWSTMVMG----YSKAGDM 263
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 186/628 (29%), Positives = 326/628 (51%), Gaps = 65/628 (10%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQ-----YVFVNNAKISALSRAGKISAAR 70
L P IL+ +CGN + LI + + V+N+ ++ ++ G++S AR
Sbjct: 187 LLPKILQ------ACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCAR 240
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDND 126
+ F+ M +D ++WN+IITGY Q G L++S LF+ M + I V+WN +I +
Sbjct: 241 RFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSG 300
Query: 127 RIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEEATRLFEQM------PR----- 171
+ DDA + + M + T+ +MISGF ++ R +A LF +M P
Sbjct: 301 KCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVT 360
Query: 172 ----------------------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
+++ +++D + K GE++ AR + D + K
Sbjct: 361 SGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKK 420
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLF 261
+V +W MI GY + +A +LF +M + D NV AMI+G+ + G + A LF
Sbjct: 421 DVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLF 480
Query: 262 ERIQP-----KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
R++ +D S+N++IAGY QNG +AL +F M ++P+ T++S+ AC+
Sbjct: 481 HRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACAN 540
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L + ++ H ++R + +SV N +I Y++ G I+ ++ F+ I S +++SWN++
Sbjct: 541 LVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSL 600
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
IA + HG + AL F QM G P TFLS++ A +G V++ +F M++ Y
Sbjct: 601 IAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQ 660
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
I+P EH++ ++D+L R+G+L +A + + M E D+ +W +LL A I+ N+ L A
Sbjct: 661 ILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTASKIHGNIGLAIRAG 720
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
+ + EL+P N +++ + +YA +G + DV+++R K + SWIE N VH F
Sbjct: 721 ECLLELEPSNFSIHQQILQMYALSGKFEDVSKLRKSEKRSETKQPLGCSWIEAKNIVHTF 780
Query: 557 LGGDMSHPCIDKIHLELKRASVQMKSVD 584
+ D S P D +H ++ + ++K+ D
Sbjct: 781 VADDRSRPYFDFLHSWIENVARKVKAPD 808
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 193/423 (45%), Gaps = 55/423 (13%)
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS----------- 176
+ +A F M ERN ++AMI + + E + F M ++
Sbjct: 135 LGEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQA 194
Query: 177 ----------------------------YTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
++L + K G + AR + M +++ VSW
Sbjct: 195 CGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSW 254
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQP 266
+ITGY + ++ +LF +M + +VT +I + + G ++A L ++++
Sbjct: 255 NSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMES 314
Query: 267 ----KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
D ++ +MI+G+AQN +AL LF M+ ++P+ T+ S +AC++L+ L +
Sbjct: 315 FRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKK 374
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G + H + ++ G ++ V N++I MYS+ G + D+ F I ++ +WN++I + Q
Sbjct: 375 GMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQ 434
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G+ KA F +M + P+ +T+ +++S G +++MDLF M K I +
Sbjct: 435 AGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTA 494
Query: 443 HYTCLVDILSRAGQLEKAWQI---TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+ L+ + G KA I Q ++ S+L AC NL +AAKK+
Sbjct: 495 SWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACA-NL------VAAKKV 547
Query: 500 REL 502
+E+
Sbjct: 548 KEI 550
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 161/319 (50%), Gaps = 20/319 (6%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N FV T +++ + K G L AR +F ++ ++ +++AMI Y++ + E ++ F M+
Sbjct: 118 NPFVETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMM 177
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ + PD+ L + AC G+ H LVIR G N+ V N+++ +Y++CG +
Sbjct: 178 EDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLS 237
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F + + VSWN+II + Q G EK+ F +M G +P +T+ L+++
Sbjct: 238 CARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYS 297
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM---PFEADT 473
+GK +++M+L + M + + I+P +T ++ ++ + +A ++ + M E +
Sbjct: 298 QSGKCDDAMELMKKM-ESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNG 356
Query: 474 GVWGSLLAAC----VINLNVELGELAAKK--MRELDPQNSAVYVMLSNLYAAAGMWRDVT 527
S ++AC + +EL +A K + +L NS L ++Y+ +G D
Sbjct: 357 VTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNS-----LIDMYSKSGELEDAR 411
Query: 528 RVRLLMKEQGVTKQCAYSW 546
RV + + K+ Y+W
Sbjct: 412 RVFDM-----ILKKDVYTW 425
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 175/565 (30%), Positives = 298/565 (52%), Gaps = 54/565 (9%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
VFV++A I + GKI ++F++M T++V++W AII G G+ E F M
Sbjct: 159 VFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWR 218
Query: 108 ------------PVKNIVSWNCMIAG-CIDNDRIDDAFDYFQAMPERNTATYNAMISGFL 154
+K + + G I I FD ++ N + + +
Sbjct: 219 SKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFD-------ESSFVINTLATMYN 271
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMS-----FKN 204
K G+ + RLFE+M +V+S+T ++ +++ GE + A R Y+S F
Sbjct: 272 KCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAA 331
Query: 205 VVS---------WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
V+S W I G+V A + V ++IT + K G+L+
Sbjct: 332 VISSCANLAAAKWGEQIHGHVLRLGLVNA-------------LSVANSIITLYSKCGLLK 378
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A L+F I KD +S++ +I+ Y+Q G A+EA S M + +P++ L SV + C
Sbjct: 379 SASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCG 438
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
++ LL +G+Q H ++ G + V +A+I+MYS+CG + ++ F + +++SW
Sbjct: 439 SMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTA 498
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+I +A+HG+ ++A+ F ++ G PD + F+ +L+AC HAG V+ F LM VY
Sbjct: 499 MINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVY 558
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
I PS EHY CL+D+L RAG+L +A I + MPF D VW +LL AC ++ +V+ G
Sbjct: 559 RISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWT 618
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
A+++ +LDP ++ ++ L+N+YAA G W++ +R LMK +GV K+ +SW+ + ++++
Sbjct: 619 AEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNA 678
Query: 556 FLGGDMSHPCIDKIHLELKRASVQM 580
F+ GD +HP + I LK S +
Sbjct: 679 FVAGDQAHPQSEHITTVLKLLSANI 703
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 224/463 (48%), Gaps = 41/463 (8%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+S + N+++ L + G++ AR +FD+MT +D I+W +I GY E+ LF
Sbjct: 52 YSVHNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILF 111
Query: 105 QSM-----PVKNIVSWNCMIAGCIDNDRI--DDAFDYFQAMPERNTATY--NAMISGFLK 155
+M P ++ + + C I + F + + +A+I ++K
Sbjct: 112 SNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMK 171
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG----------EVDKARALSDYMSFKNV 205
G++E+ R+FE+M RNV+S+TA++ G + G E+ +++ D +F
Sbjct: 172 VGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTF--- 228
Query: 206 VSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+ + + + + + +D++ FV+ + T + K G + LFE+
Sbjct: 229 ---AIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEK 285
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++ D VS+ +I+ Y Q G E A+ F M K + P+ T +V ++C+ L G
Sbjct: 286 MRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWG 345
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
Q H V+R G +SV N++IT+YS+CG + + L F I +++SW+TII+ ++Q
Sbjct: 346 EQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQG 405
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY------GI 437
G+ ++A + S M G P+ S+LS CG SM L E +V+ GI
Sbjct: 406 GYAKEAFDYLSWMRREGPKPNEFALSSVLSVCG-------SMALLEQGKQVHAHLLCIGI 458
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ ++ ++ + S+ G +++A +I GM D W +++
Sbjct: 459 DHEAMVHSAIISMYSKCGSVQEASKIFNGMKIN-DIISWTAMI 500
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 162/350 (46%), Gaps = 44/350 (12%)
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
N++ + L +K+G++ KAR + D M+ ++ +SWT +I GYV EA LF M
Sbjct: 55 HNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNM 114
Query: 232 -----PDYDK---------------------------------NVFVVTAMITGFCKVGM 253
P D+ +VFV +A+I + KVG
Sbjct: 115 WVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGK 174
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+E +FE++ ++ VS+ A+IAG G E L FS M + + D T A
Sbjct: 175 IEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKA 234
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
+ LL+ G+ H I+ GF+ + V N + TMY++CG F ++ P++VSW
Sbjct: 235 SADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSW 294
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH--AGKVNESMDLFELM 431
T+I+ + Q G E A+ F +M + P+ TF +++S+C + A K E + L
Sbjct: 295 TTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLR 354
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ G++ + ++ + S+ G L+ A + G+ D W ++++
Sbjct: 355 L---GLVNALSVANSIITLYSKCGLLKSASLVFHGIT-RKDIISWSTIIS 400
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++RL + V N+ I+ S+ G + +A +F +T KD+I+W+ II+ Y Q G+ +E+
Sbjct: 352 VLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEA 411
Query: 101 KNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISG 152
+ M P N + + +++ C ++ + + ++A+IS
Sbjct: 412 FDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISM 471
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+ K G ++EA+++F M ++IS+TAM++G+ + G +A L + +S + VM
Sbjct: 472 YSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMF 531
Query: 213 TG 214
G
Sbjct: 532 IG 533
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 167/477 (35%), Positives = 259/477 (54%), Gaps = 39/477 (8%)
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL----- 154
++++F S P + + WN MI + + ++A + + M E+ + I L
Sbjct: 102 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYS 161
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
K G L+ A +F++MP+R+V+++ AM+ G + + AR + D M ++ VSW M+ G
Sbjct: 162 KMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAG 221
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
Y N F E ELF +M K+G V++N
Sbjct: 222 YAHNGCFVEVLELFDKM------------------KLGN----------------VTWNV 247
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+IA Y QNG A+EA+ F M + P+ T VSV A + L EG H +I+ G
Sbjct: 248 IIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMG 307
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F +N V N++I MY++CG + SE F ++ + VSWN +++ +A HGH ++A+ FS
Sbjct: 308 FLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFS 367
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
M + D ++F+S+LSAC HAG V E +F M Y I P EHY C+VD+L RA
Sbjct: 368 LMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRA 427
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G ++ + MP E D GVWG+LL +C ++ NV+LGE+A + +L+P+N A +V+LS
Sbjct: 428 GLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLS 487
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHL 571
++YA +G W D + R M + G+ K SW+E+ NKVH F GD SHP ++ +HL
Sbjct: 488 SIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHL 544
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 191/425 (44%), Gaps = 64/425 (15%)
Query: 10 TYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYV--FVNNAKISAL----SRA 63
TY + +P R+LS SC + P L+++ + V F ++ I+ L S
Sbjct: 48 TYTNYLHYP---RLLS---SCKHLNP-----LLQIHAQIIVSGFKHHHSITHLINLYSLF 96
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI-AGC 122
K AR +FD I WN++I Y ++ E+ ++ M K + + I AG
Sbjct: 97 HKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGL 156
Query: 123 ID-NDRIDD---AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYT 178
+D ++ D A + F MP+R+ +NAMI+G + A R+F+QM ++ +S+
Sbjct: 157 VDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWG 216
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------P 232
M+ G+ G + L D M N V+W V+I Y++N EA F++M P
Sbjct: 217 TMMAGYAHNGCFVEVLELFDKMKLGN-VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP 275
Query: 233 D-------------------------------YDKNVFVVTAMITGFCKVGMLENARLLF 261
+ + N V ++I + K G L+ + LF
Sbjct: 276 NSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLF 335
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+ KD VS+NAM++GYA +G + A+ LFS M + +Q D + VSV +AC L+
Sbjct: 336 NEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVE 395
Query: 322 EGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIA 378
EGR+ H + + + ++ ++ + R G+ D L F ++ P+ W ++
Sbjct: 396 EGRKIFHSMSDKYHIKPDLEHYACMVDLLGR-AGLFDETLGFIKVMPVEPDAGVWGALLG 454
Query: 379 AFAQH 383
+ H
Sbjct: 455 SCRMH 459
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C+I++ V N+ I ++ G++ + +LF++M KD ++WNA+++GY +G
Sbjct: 302 CIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDR 361
Query: 100 SKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMI 150
+ LF M + VS+ +++ C +++ F +M ++ + Y M+
Sbjct: 362 AIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMV 421
Query: 151 SGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDY---MSFKNVV 206
+ G +E + MP + + A+L V D+ + +N
Sbjct: 422 DLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPA 481
Query: 207 SWTVMITGYVKNERFCEARELFYRMPD 233
+ V+ + Y ++ R+ +A + +M D
Sbjct: 482 HFVVLSSIYAQSGRWADAGKARSKMND 508
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 262/445 (58%), Gaps = 7/445 (1%)
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
T N ++ + K G L+ A +F+ M R V+++T+++ + ++G D+A L M
Sbjct: 33 TTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDR 92
Query: 203 K----NVVSWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+ ++ + T ++ N +++ + R D N+FV A++ + K G +E+
Sbjct: 93 EGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMED 152
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A +F + KD +S+N MI GY++N + EAL LF M+ ++M+PD TL + AC++
Sbjct: 153 ANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMV-LEMKPDGTTLACILPACAS 211
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L+ G++ H ++RNGF ++ V NA++ MY +CG + + L F I + +L++W +
Sbjct: 212 LASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVM 271
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
IA + HG A+ F++M G +PD ++F+S+L AC H+G ++E F +M
Sbjct: 272 IAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECN 331
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
+ P EHY C+VD+L+R+G+L A++ + MP E D +WG+LL+ C I+ +V+L E A
Sbjct: 332 VKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVA 391
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
+ + EL+P+N+ YV+L+N YA A W +V ++R + +G+ K SWIE+ +KVH F
Sbjct: 392 EHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIF 451
Query: 557 LGGDMSHPCIDKIHLELKRASVQMK 581
L G+ SHP KI + LKR +MK
Sbjct: 452 LAGNSSHPQAKKIEVLLKRLRSKMK 476
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 186/428 (43%), Gaps = 54/428 (12%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK--- 110
N + ++ G + A +FD M+ + V+TW ++I Y + G E+ LF M +
Sbjct: 37 NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS 96
Query: 111 -NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRL 165
+I + ++ C N +++ D + E N NA++ + K G +E+A +
Sbjct: 97 PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 156
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM------ITGYVKNE 219
F +MP +++IS+ M+ G+ K ++A +L M + T + +
Sbjct: 157 FLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLD 216
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
R E R + + V A++ + K G+ ARLLF+ I KD +++ MIAGY
Sbjct: 217 RGKEVHGHILR-NGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGY 275
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
+G A+ F+ M + ++PD+ + +S+ ACS LL+EG + F
Sbjct: 276 GMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRF--------FNVMQ 327
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
CN P L + I+ A+ G A F M +
Sbjct: 328 DECNV----------------------KPKLEHYACIVDLLARSGKLAMAYKFIKSMPI- 364
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-VYGIIP-SSEHYTCLVDILSRAGQL 457
+PD + +LLS C +++ + L E + + V+ + P ++ +Y L + + A +
Sbjct: 365 --EPDATIWGALLSGC----RIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKW 418
Query: 458 EKAWQITQ 465
E+ ++ Q
Sbjct: 419 EEVKKLRQ 426
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 7/221 (3%)
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+VS+ AC+ ++ GR H ++ + CN ++ MY++CG + + L F +
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+V+W ++IAA+A+ G ++A+ F +M G PD T ++L AC G + D
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 427 LFELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+ + + S + C L+D+ ++ G +E A + MP + D W +++
Sbjct: 121 VHNYIREND---MQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGGYS 176
Query: 485 IN-LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
N L E L + E+ P + + +L + A + R
Sbjct: 177 KNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLDR 217
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 18/192 (9%)
Query: 42 IRLFS-------TQYVFVNNAKISALSRAGKISAARQLFDQMTTKD----VITWNAIITG 90
IRLF + +F + A + G + + + + + D + NA++
Sbjct: 84 IRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDM 143
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP---ERNTATYN 147
Y + G ++++ ++F MPVK+I+SWN MI G N ++A F M + + T
Sbjct: 144 YAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKPDGTTLA 203
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFK 203
++ L+ + + R S A++D ++K G AR L D + K
Sbjct: 204 CILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTK 263
Query: 204 NVVSWTVMITGY 215
++++WTVMI GY
Sbjct: 264 DLITWTVMIAGY 275
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV NA + ++ G + A +F +M KD+I+WN +I GY +N E+ +LF M +
Sbjct: 134 IFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVL 193
Query: 110 K---NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEA 162
+ + + C++ C +D + + + NA++ ++K G A
Sbjct: 194 EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLA 253
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKG 188
LF+ +P +++I++T M+ G+ G
Sbjct: 254 RLLFDMIPTKDLITWTVMIAGYGMHG 279
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 15/197 (7%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNL 103
FS Q V NA + + G AR LFD + TKD+ITW +I GY +GF +
Sbjct: 230 FFSDQQV--ANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITT 287
Query: 104 FQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFL 154
F M I VS+ ++ C + +D+ + +F M + Y ++
Sbjct: 288 FNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLA 347
Query: 155 KHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDY---MSFKNVVSWTV 210
+ G+L A + + MP + + A+L G +V A ++++ + +N + +
Sbjct: 348 RSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVL 407
Query: 211 MITGYVKNERFCEAREL 227
+ Y + E++ E ++L
Sbjct: 408 LANTYAEAEKWEEVKKL 424
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 173/556 (31%), Positives = 303/556 (54%), Gaps = 35/556 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ I A S G I+ ARQ+FD + + WNAII GY +N Q++ ++ +M +
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLA 113
Query: 111 NI----VSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ ++ ++ C + R A F+ + + N +I+ + K RL
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHA-QVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 162 ATRLFE--QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV-VSWTVMITGYVKN 218
A +FE +P R ++S+TA++ + + GE +A + +M +V W +++ V N
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVS--VLN 230
Query: 219 ERFC-----EARELFYRM--------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
C + R + + PD ++ ++ T + K G + A++LF++++
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPD------LLISLNTMYAKCGQVATAKILFDKMK 284
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+ + +NAMI+GYA+NG A EA+ +F MI D++PD ++ S +AC+ + L + R
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+ V R+ + +V + +A+I M+++CG + + L F + ++V W+ +I + HG
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGR 404
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+A+ + M G P+ +TFL LL AC H+G V E F LM + I P +HY
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-HKINPQQQHYA 463
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C++D+L RAG L++A+++ + MP + VWG+LL+AC + +VELGE AA+++ +DP
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS 523
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
N+ YV LSNLYAAA +W V VR+ MKE+G+ K SW+E+ ++ F GD SHP
Sbjct: 524 NTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPR 583
Query: 566 IDKIHLELKRASVQMK 581
++I +++ ++K
Sbjct: 584 YEEIERQVEWIESRLK 599
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+++A I ++ G + AR +FD+ +DV+ W+A+I GY +G +E+ +L+++M
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 110 ----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEE 161
N V++ ++ C + + + + +F M + Y +I + G L++
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 162 ATRLFEQMP-RRNVISYTAMLDGFMKKGEVD 191
A + + MP + V + A+L K V+
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+Q H ++ G + + + +I S G I + F + P + WN II ++++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
H++ AL+ +S M L PD TF LL AC +G + M F + +V+ + ++
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKAC--SGLSHLQMGRF-VHAQVFRLGFDADV 154
Query: 444 YT--CLVDILSRAGQLEKAWQITQGMPFEADTGV-WGSLLAACVIN 486
+ L+ + ++ +L A + +G+P T V W ++++A N
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 200
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 302/556 (54%), Gaps = 20/556 (3%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
N +++L V+V N I+ S ++ A ++F++ + D ++WN+I+ GY + G ++
Sbjct: 102 NHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVE 161
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
E+K+++ MP ++I++ N MI + +A F M E++ T++A+I+ F ++
Sbjct: 162 EAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEM 221
Query: 159 LEEATRLFEQMPR-----RNVISYTAMLDG----FMKKGEVDKARAL----SDYMSFKNV 205
EEA R F M + V++ +A+ + G++ + +L Y++ +N
Sbjct: 222 YEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNA 281
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+I Y K AR+LF Y ++ +MI+G+ K +++NA+ +F+ +
Sbjct: 282 -----LIYMYSKCGDIMVARKLFDEA--YLLDLISWNSMISGYLKCNLVDNAKAIFDSMP 334
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
KD VS+++MI+GYAQN + +E L LF M +PD+ TLVSV +AC+ L L +G+
Sbjct: 335 EKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKW 394
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H + RNG NV + +I MY +CG + + F + + +WN +I A +G
Sbjct: 395 VHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGL 454
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E +L FS M P+ ITF+ +L AC H G V+E F M+ + I P+ +HY
Sbjct: 455 VESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYG 514
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C+VD+L RAG+L++A ++ MP D WG+LL AC + + E+G +K+ EL P
Sbjct: 515 CMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPD 574
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
+ +V+LSN+YA+ G W DV +R +M + V K S IE +H FL GD +HP
Sbjct: 575 HDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPD 634
Query: 566 IDKIHLELKRASVQMK 581
+D I L ++++K
Sbjct: 635 MDAIEDMLVEMAMKLK 650
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 26/291 (8%)
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
++ R +F I+ +C +N MI Y Q A L+ M+ + D+ T + A
Sbjct: 28 IDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQA 87
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
CS + E +Q H V++ GF+++V V N +I +S C + D+ F + + VSW
Sbjct: 88 CSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSW 147
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N+I+A + + G+ E+A + QM + I S++ G G V E+ LF+ M++
Sbjct: 148 NSILAGYIEIGNVEEAKHIYHQMP----ERSIIASNSMIVLFGMRGLVVEACKLFDEMLE 203
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP---FEADTGVWGSLLAAC----VIN 486
++ L+ + E+A + GM D V S L+AC V+N
Sbjct: 204 -----KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVN 258
Query: 487 LNVELGELAAKKMRE--LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
+ + L+ K E ++ QN+ +Y +Y+ G D+ R L E
Sbjct: 259 MGKLIHSLSLKIGTESYINLQNALIY-----MYSKCG---DIMVARKLFDE 301
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 176/524 (33%), Positives = 294/524 (56%), Gaps = 21/524 (4%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK- 110
+ A + ++ G + A+++F+ M KD+ W++II+ Y + G + + L++ M +
Sbjct: 47 LETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEG 106
Query: 111 ---NIVSWNCMIAGCIDNDRIDDAFDYFQ-----AMPERNTATYNAMISGFLKHGRLEEA 162
N+V++ C + GC + D Q +P+ + +++++ +LK + EA
Sbjct: 107 VEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQ-DDVLQDSLLNMYLKCDEMVEA 165
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV---SWT-VMITGYVKN 218
++FE M RNV SYTAM+ +++ GE +A L MS + ++T I G V+
Sbjct: 166 RKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEG 225
Query: 219 ERFCEARELFYRM---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E +R +D NV V A++T + K G AR +F+ + ++ +S+ +M
Sbjct: 226 LGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSM 285
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IA YAQ+G +EAL LF +MD++P + S AC+ L L+EGR+ H V+
Sbjct: 286 IAAYAQHGNPQEALNLFK---RMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHL 342
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
A+ + ++++MY+RCG + D+ F ++ + + S N +IAAF QHG ++AL + +
Sbjct: 343 -ASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRR 401
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G DGITF+S+L AC H V + D F+ +V +G++P EHY C+VD+L R+G
Sbjct: 402 MEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSG 461
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L A ++ + MP++ D W +LL+ C + ++ GE AA+K+ EL P + YV LSN
Sbjct: 462 RLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSN 521
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
+YAAA + D RVR M+E+GVT A S+IEI N++H F G
Sbjct: 522 MYAAAKRFDDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSG 565
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 179/359 (49%), Gaps = 47/359 (13%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
++++ K LEE RL E + R ++ TA+L + K G +D A+ + + M
Sbjct: 14 TSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEI 73
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLL 260
K++ +W+ +I+ Y + R A L+ RM + NV + G V L + R +
Sbjct: 74 KDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAI 133
Query: 261 FERI----QPKDCV-------------------------------SFNAMIAGYAQNGVA 285
+RI P+D V S+ AMI+ Y Q G
Sbjct: 134 HQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEH 193
Query: 286 EEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EAL LFS M K++ ++P+ T ++ A L L +GR+ H + GF+ NV V NA
Sbjct: 194 AEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNA 253
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++TMY +CG +++ F + + N++SW ++IAA+AQHG+ ++AL F +M + +P
Sbjct: 254 LVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDV---EPS 310
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
G++F S L+AC G ++E ++ +V+ + P E T L+ + +R G L+ A ++
Sbjct: 311 GVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMYARCGSLDDARRV 367
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 134/301 (44%), Gaps = 51/301 (16%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
R F T V V NA ++ + G AR++FD MT ++VI+W ++I Y Q+G QE+ N
Sbjct: 242 RGFDTN-VVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300
Query: 103 LFQSMPVK-NIVSWN-----CMIAGCIDNDR----------------------------- 127
LF+ M V+ + VS++ C + G +D R
Sbjct: 301 LFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETSLLSMYARCGS 360
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDG 183
+DDA F M R+ + NAMI+ F +HGR ++A R++ +M + + I++ ++L
Sbjct: 361 LDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVA 420
Query: 184 FMKKGEVDKAR-----ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV 238
V R + D+ V + M+ ++ R +A EL MP Y +
Sbjct: 421 CSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMP-YQTDA 479
Query: 239 FVVTAMITGFCKVGMLEN----ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+++G + G L AR +FE + P + + + + YA ++A R+
Sbjct: 480 VAWMTLLSGCKRHGDLNRGERAARKVFE-LAPAETLPYVFLSNMYAAAKRFDDARRVRKE 538
Query: 295 M 295
M
Sbjct: 539 M 539
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 67/114 (58%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D + S+ AC+ LQ L EGR+ H +I GF ++ + A++ MY++CG + D++ F
Sbjct: 9 DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 68
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ +L +W++II+A+A+ G E A++ + +M G +P+ +TF L C
Sbjct: 69 EGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCA 122
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 179/647 (27%), Positives = 314/647 (48%), Gaps = 115/647 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V +A + S+ K+ A ++F +M ++++ W+A+I GY QN E LF+ M
Sbjct: 173 VVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLK 232
Query: 108 --------------------------------PVKNIVSWNCMIAGCIDN-----DRIDD 130
+K+ +++ +I + DR+ D
Sbjct: 233 VGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSD 292
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR------------------ 172
A+ F +P +YNA+I G+ + + +A +F+ + R
Sbjct: 293 AWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSV 352
Query: 173 ---------------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
N+ +LD + K G + +A + D M ++ VSW +
Sbjct: 353 IKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAI 412
Query: 212 ITGYVKNERFCEARELFYRM------PD------------------YDKNV--------- 238
I + +NE + LF M PD Y +
Sbjct: 413 IAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGM 472
Query: 239 ----FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
FV +A++ + K GML A + +R++ K VS+N++I+G++ +E A R FS
Sbjct: 473 GLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQ 532
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M++M + PD+ T +V C+ + + G+Q H +++ ++V + + ++ MYS+CG
Sbjct: 533 MLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGN 592
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ DS L F + + V+W+ +I A+A HGH E+A+ F +M L P+ F+S+L A
Sbjct: 593 MQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRA 652
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V++ + F++M YG+ P EHY+C+VD+L R+ Q+ +A ++ + M FEAD
Sbjct: 653 CAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDV 712
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+W +LL+ C + NVE+ E A + +LDPQ+S+ YV+L+N+YA GMW +V ++R +MK
Sbjct: 713 IWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMK 772
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+ K+ SWIE+ ++VH FL GD +HP ++I+ + +MK
Sbjct: 773 NCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMK 819
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 231/478 (48%), Gaps = 47/478 (9%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V N + ++ ++ A ++FD+M +DVI+WN +I GY + G + +++LF +MP
Sbjct: 41 IYVANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPE 100
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMI---SGFLKHGRLEEA 162
+++VSWN +++ + N + + F M + AT++ ++ SG +G +
Sbjct: 101 RDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQV 160
Query: 163 TRLFEQMPRRN-VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
L QM N V++ +A++D + K ++D A + M +N+V W+ +I GYV+N+RF
Sbjct: 161 HCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRF 220
Query: 222 CEARELFYRM-------------------------------------PDYDKNVFVVTAM 244
E +LF M D+ + + TA
Sbjct: 221 IEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTAT 280
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
+ + K + +A +F + S+NA+I GYA+ +AL +F + + + D+
Sbjct: 281 LDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDE 340
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
+L TACS ++ EG Q H L ++ G N+ V N ++ MY +CG ++++ F
Sbjct: 341 ISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDD 400
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ + VSWN IIAA Q+ K L F M + +PD T+ S++ AC +N
Sbjct: 401 MERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYG 460
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
M++ +VK G+ + LVD+ + G L +A +I + E T W S+++
Sbjct: 461 MEIHGRIVKS-GMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLE-EKTTVSWNSIISG 516
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 181/385 (47%), Gaps = 18/385 (4%)
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V I NC++ + ++ AF F MP R+ ++N MI G+ + G + A LF+
Sbjct: 38 VPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDT 97
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKA-------RALS---DYMSFKNVVSWTVMITGY-VK 217
MP R+V+S+ ++L ++ G K+ R+L DY +F V+ I Y +
Sbjct: 98 MPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLG 157
Query: 218 NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ C A ++ ++ +V +A++ + K L+ A +F + ++ V ++A+IA
Sbjct: 158 LQVHCLAIQM-----GFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIA 212
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GY QN E L+LF M+K+ M +T SVF +C+ L G Q H +++ F
Sbjct: 213 GYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAY 272
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ + A + MY++C + D+ F + +P S+N II +A+ KAL F +
Sbjct: 273 DSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQ 332
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
D I+ L+AC E + L L VK G+ + ++D+ + G L
Sbjct: 333 RTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKC-GLGFNICVANTILDMYGKCGAL 391
Query: 458 EKAWQITQGMPFEADTGVWGSLLAA 482
+A I M D W +++AA
Sbjct: 392 VEACTIFDDME-RRDAVSWNAIIAA 415
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 39/215 (18%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T + CS L+ LN G+Q+H +I F + V N ++ Y + + + F ++
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+++SWNT+I +A+ G+ A F M + D +++ SLLS H G +S+
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMP----ERDVVSWNSLLSCYLHNGVNRKSI 123
Query: 426 DLFELMVKV--------YGIIPSS----EHY----------------------TCLVDIL 451
++F M + + ++ + E Y + LVD+
Sbjct: 124 EIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
S+ +L+ A++I + MP E + W +++A V N
Sbjct: 184 SKCKKLDGAFRIFREMP-ERNLVCWSAVIAGYVQN 217
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 6 YFHQTYLKRILFPPILRILSTPDSCGNFTP-------HSSNCLIRLFSTQYVFVNNAKIS 58
YF Q L+ + P + D C N H+ + L S V++ + +
Sbjct: 529 YFSQM-LEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSD--VYIASTLVD 585
Query: 59 ALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VS 114
S+ G + +R +F++ +D +TW+A+I Y +G +++ LF+ M + N+
Sbjct: 586 MYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTI 645
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ ++ C +D YFQ M + + Y+ M+ + ++ EA +L E M
Sbjct: 646 FISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESM 705
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 190/667 (28%), Positives = 330/667 (49%), Gaps = 137/667 (20%)
Query: 52 VNNAKISALSRAGKISAARQLFDQM---TTKDVITWNAIITGYWQNGFLQESKNLFQSM- 107
+ NA IS S+ G + A+Q FD++ + +DV+TWNA+I+ + +NG +E+ LF+ M
Sbjct: 178 LGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMD 237
Query: 108 ----PVKNIVSWNCMIAGCID------------NDRI----------------------- 128
P N V++ ++ C++ + RI
Sbjct: 238 RDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLG 297
Query: 129 --DDAFDYF----QAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------------- 169
DDA++ F P + T +AMIS ++G +E+ RLF M
Sbjct: 298 SLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLV 357
Query: 170 ----------------------------PRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
R NV+ T +L + + ++ +ARA D +
Sbjct: 358 SVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLG-TTLLTTYARSNDLPRARATFDAIQ 416
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------------------------------ 231
+VVSW M Y+++ R EA LF RM
Sbjct: 417 SPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAI 476
Query: 232 ----------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP--KDCVSFNAMIAGY 279
+ + V A + + K G L +AR +FERI P +DC+++N+M+A Y
Sbjct: 477 GKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAY 536
Query: 280 AQNGVAEEALRLFSGMIKMDM-QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
+G+ +EA LF M + +P+ T V+V A ++ + +GR+ H V+ NGFE++
Sbjct: 537 GHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESD 596
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHS--PNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ NA++ MY++CG + D++ F + S ++++W ++IA +AQ+G E+AL F M
Sbjct: 597 TVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTM 656
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G P+ +TF+S L+AC H GK+ + +L M +GI+P+S+H++C+VD+L R G+
Sbjct: 657 QQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGR 716
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
L++A ++ + +AD W +LL AC + +E GE A+++ +LDP+ ++ Y++L+++
Sbjct: 717 LDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASM 775
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
YAAAG W + +R M ++G+ S +E+ ++H F GD SHP ++I+LEL+R
Sbjct: 776 YAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERL 835
Query: 577 SVQMKSV 583
+K+
Sbjct: 836 HWSIKAA 842
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 203/449 (45%), Gaps = 80/449 (17%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDV----ITWNAIITGYWQNGFLQESKNLFQSMPVK 110
A ++A S G ++A R++ Q++ +D + NA+I+ Y + G L ++K F +P
Sbjct: 146 ALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRA 205
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM- 169
+ +R+ T+NAMIS FL++G EA +LF M
Sbjct: 206 S----------------------------KRDVVTWNAMISAFLRNGSAREALQLFRDMD 237
Query: 170 ----PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
P N +++ ++LD ++ G +S ++V + I G
Sbjct: 238 RDGAPPPNSVTFVSVLDSCVEAG----------LLSLEDVRAIHGRIVG----------- 276
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD----CVSFNAMIAGYAQ 281
++ FV TA++ + K+G L++A +F R ++ V+ +AMI+ Q
Sbjct: 277 ------AGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQ 330
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG +E+LRLF M +P TLVSV ACS LQ+ + + V+ E +
Sbjct: 331 NGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGS----ATAFVLEQAMEVVSAT 386
Query: 342 CNAV-----ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ V +T Y+R + + F I SP++VSWN + AA+ QH +AL+ F +M
Sbjct: 387 RDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERM 446
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESM--DLFELMVKVYGIIPSSEHYTCLVDILSRA 454
L G P TF++ L+AC S + +++ G+ + +++ ++
Sbjct: 447 LLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKC 506
Query: 455 GQLEKAWQITQGM-PFEADTGVWGSLLAA 482
G L A + + + P D W S+LAA
Sbjct: 507 GSLADARAVFERISPARRDCITWNSMLAA 535
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 131/243 (53%), Gaps = 12/243 (4%)
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+ R D + F+ + +I K G L A L +R S AMI + ++G +
Sbjct: 69 ILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRF--ASVYSCTAMIRAWMEHGRPD 126
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
+A+ LF +M+++P+ L+++ ACS L L GR+ H + FE N + NA+I
Sbjct: 127 KAMELFD---RMEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALI 183
Query: 347 TMYSRCGGILDSELAFRQI---HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF-D 402
+MYS+CG ++D++ AF ++ ++V+WN +I+AF ++G +AL F M +G
Sbjct: 184 SMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPP 243
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY--TCLVDILSRAGQLEKA 460
P+ +TF+S+L +C AG ++ D+ + ++ G E + T LVD + G L+ A
Sbjct: 244 PNSVTFVSVLDSCVEAGLLSLE-DVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDA 302
Query: 461 WQI 463
W++
Sbjct: 303 WEV 305
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 310 VFTACSALQLLNEGRQ--SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
+ AC L+ L +G++ +H+L R + + + +I M+++CG + ++E + S
Sbjct: 49 LLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFAS 108
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+ S +I A+ +HG +KA+ F +M + P+ ++L++AC G + +
Sbjct: 109 --VYSCTAMIRAWMEHGRPDKAMELFDRMEVR---PNCHALIALVNACSCLGNLAAGRRI 163
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA--DTGVWGSLLAACVI 485
+ +S L+ + S+ G L A Q +P + D W ++++A +
Sbjct: 164 HS-QISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLR 222
Query: 486 NLNVELGELAAKKMRELD-----PQNSAVYVMLSNLYAAAGM 522
N + A + R++D P NS +V + + AG+
Sbjct: 223 NGS---AREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGL 261
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 177/588 (30%), Positives = 298/588 (50%), Gaps = 78/588 (13%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
+NN + S+ GK+ QLF++MT +DVI+WN +I+ Y G +E+ +LF M V
Sbjct: 170 LNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSG 229
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEAT 163
+ ++ +++ C ++ + + + N ++ + K G+++EA
Sbjct: 230 VLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAH 289
Query: 164 RLFEQMPRR--NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
L + +V+ +T ++ G++K ++DKAR L D M+ +++VSWT M++GYV+ +
Sbjct: 290 GLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYY 349
Query: 222 CEARELFYRM----------------------PDYD----KNVFVVT-----------AM 244
CE+ ELF +M D+D + F+VT A+
Sbjct: 350 CESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNAL 409
Query: 245 ITGFCKVGML-------------------------------ENARLLFERIQPKDCVSFN 273
+ + K G L + AR F +I KD VS+N
Sbjct: 410 LDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWN 469
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
M+ Y ++ + E+ +F M +++PD TL+S+ ++C+ + LN G +V + +N
Sbjct: 470 TMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKN 529
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
+ + A+I MY +CG + + F QI N+ W ++AA+A G +A+ +
Sbjct: 530 EIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLY 589
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M G PD +TF++LL+AC H G V+E F + Y IIP+ HY C+VD+L R
Sbjct: 590 LEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGR 649
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
G LE+ + + MP E D +W SL+ AC + NVEL E A K++ E+DP N+ +V+L
Sbjct: 650 VGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLL 709
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
SN+YA AG W DV++VR + E GV KQ ++ IE VH F+ ++
Sbjct: 710 SNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASNL 757
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 220/504 (43%), Gaps = 80/504 (15%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NI 112
++ L + A Q+ + I WN ++ + G QE + M + +I
Sbjct: 74 LAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDI 133
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEEATRLFEQ 168
+++ +I C N + + + + RN + N ++ + K G+L+E +LFE+
Sbjct: 134 STFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEK 193
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS--------------------- 207
M R+VIS+ M+ ++ KG +A L D M V+
Sbjct: 194 MTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMG 253
Query: 208 ------------W------TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
W ++ Y K + EA L R + + +V + T +++G+
Sbjct: 254 KRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYV 313
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K ++ AR LF+++ + VS+ M++GY Q G E+L LF M ++ PD+ LV+
Sbjct: 314 KSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVT 373
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC----------------- 352
V +AC L+ + GR H ++ G + + NA++ +Y++C
Sbjct: 374 VLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKS 433
Query: 353 --------------GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
GG+ + F +I ++VSWNT++ A+ +H + ++ F +M
Sbjct: 434 AASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQS 493
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+ PD T +SLLS+C G +N + + ++ I + T L+D+ + G +E
Sbjct: 494 SNVKPDKTTLISLLSSCAKVGALNHGI-WVNVYIEKNEIGIDAMLGTALIDMYGKCGCVE 552
Query: 459 KAWQITQGMPFEADTGVWGSLLAA 482
A++I + E + VW +++AA
Sbjct: 553 MAYEIFTQI-IEKNVFVWTAMMAA 575
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 134/285 (47%), Gaps = 26/285 (9%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ NA + ++ GK+ A + F+Q+ K +WN+++ G+ ++G + ++++ F +P K
Sbjct: 404 FLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEK 463
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRLF 166
+IVSWN M+ + +D +++F+ F M N T +++S K G L +
Sbjct: 464 DIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVN 523
Query: 167 EQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+ + + + TA++D + K G V+ A + + KNV WT M+ Y +
Sbjct: 524 VYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQAL 583
Query: 223 EARELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP-----KDCVS 271
EA +L+ M PD+ + ++ A G G+++ F +++
Sbjct: 584 EAIDLYLEMEERGVKPDHVTFIALLAACSHG----GLVDEGYKYFNKLRSFYNIIPTIHH 639
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
+ M+ + G EE ++ +M ++PD + S+ AC +
Sbjct: 640 YGCMVDLLGRVGHLEETVKFIE---RMPIEPDVSIWSSLMRACRS 681
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 126/263 (47%), Gaps = 3/263 (1%)
Query: 241 VTAMITGFC-KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
+T+ + F V L+ A + + + +N ++ + G +E L + M+
Sbjct: 69 ITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQG 128
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+ D +T + AC + G + H +++ GF N S+ N ++ +YS+CG + +
Sbjct: 129 VLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVC 188
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F ++ +++SWNT+I+ + G Y +AL F +M ++G PD IT +SL+S C
Sbjct: 189 QLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLK 248
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ-ITQGMPFEADTGVWGS 478
+ L +V I S CLVD+ S+ G++++A +++ E D +W +
Sbjct: 249 DLEMGKRLHLYIVDNKLWIRGSL-LNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTT 307
Query: 479 LLAACVINLNVELGELAAKKMRE 501
L++ V + ++ KM E
Sbjct: 308 LVSGYVKSNKIDKARQLFDKMNE 330
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 180/591 (30%), Positives = 316/591 (53%), Gaps = 35/591 (5%)
Query: 3 CNSYFHQTYLKRILFPPILRILSTPDSCGN-----FTPHSSNCLIRLFSTQYVFVNNAKI 57
CNSY + +P +L+ +CG + N L++ VFV ++ +
Sbjct: 98 CNSYVRPDFYT---YPVVLK------ACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLM 148
Query: 58 SALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIV 113
+ ++ + A +LFD+ +DV WNA+I+ Y+++G + + F M N V
Sbjct: 149 NMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSV 208
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQM 169
++ +++ C ++ + + + ER + +A++ + K G LE A +FE++
Sbjct: 209 TFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKI 268
Query: 170 PRRNVISYTAMLDGFMKKGE----VDKARALSDYMSFKNVVSWTVMITG-----YVKNER 220
PR+N I++ AM+ G+ KG+ ++ ++D + +++ T +I +++ +
Sbjct: 269 PRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGK 328
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
F L R+ D ++F+ ++I + K G + +A +F I + VS+N MI+G+
Sbjct: 329 FIHGYILRNRI---DVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHV 385
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
G +AL ++ M + ++PD T S +ACS L L++GR+ H +I + EAN
Sbjct: 386 MVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEI 445
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V A++ MY++CG + ++ F Q+ +LVSW ++I A+ HG +AL F +M
Sbjct: 446 VMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLN 505
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
D +TFL++LSAC HAG V+E F MV Y I P EHY+CL+D+L RAG+L +A
Sbjct: 506 VRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEA 565
Query: 461 WQITQ-GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
++I Q +D G+ +L +AC+++ N LG K + E+DP + + Y++LSN+YA+
Sbjct: 566 YEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYAS 625
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
W +V +VR MKE G+ K SWIEI ++H F D S+P D ++
Sbjct: 626 VNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADGVY 676
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMP-----RRNVISYTAMLDGFMKKGEVDKARAL 196
+ + +NA++S + + R EA +LF+Q+ R + +Y +L G V R +
Sbjct: 69 DVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRI 128
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
+++ K + W V FV ++++ + K +
Sbjct: 129 HNHL-LKTGLIWDV----------------------------FVGSSLMNMYAKCDQFVD 159
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A LF+ +D +NA+I+ Y ++G AE AL+ F M ++ +P+ T V ++C+
Sbjct: 160 AIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTR 219
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L G++ H +I + V +A++ MY +CG + ++ F +I N ++WN +
Sbjct: 220 LLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAM 279
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I ++ G + +M G P +T S++ A
Sbjct: 280 ITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYA 317
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 124/251 (49%), Gaps = 4/251 (1%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLF 292
+ N+ + ++I + +A L+F+ P D +NA+++ Y N EAL+LF
Sbjct: 34 FQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPLDVSLWNALLSAYTNNFRFVEALQLF 93
Query: 293 SGM-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+ ++PD T V AC L + GR+ H +++ G +V V ++++ MY++
Sbjct: 94 DQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAK 153
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
C +D+ F + ++ WN +I+ + + G E AL F +M GF+P+ +TF +
Sbjct: 154 CDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVV 213
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+S+C + ++ +++ I+ + + LVD+ + G LE A ++ + +P
Sbjct: 214 VSSCTRLLNLERGKEVHRELIE-RRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIP-RK 271
Query: 472 DTGVWGSLLAA 482
+ W +++
Sbjct: 272 NAITWNAMITG 282
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 117/241 (48%), Gaps = 12/241 (4%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D TL+S C++ +LL +G+ H + GF++N+ + ++I Y C +EL F
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 363 RQIHSPNLVS-WNTIIAAFAQHGHYEKALIFFSQMGLNGF-DPDGITFLSLLSACGHAGK 420
+ P VS WN +++A+ + + +AL F Q+ N + PD T+ +L ACG G+
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
V + ++K G+I + L+++ ++ Q A ++ P + D G W +++
Sbjct: 122 VIYGRRIHNHLLKT-GLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFP-QRDVGCWNAVI 179
Query: 481 AACVINLNVELGELAAKKMREL--DPQNSAVYVMLS------NLYAAAGMWRDVTRVRLL 532
+ + E+ KM+EL +P + V++S NL + R++ R+L
Sbjct: 180 SCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRIL 239
Query: 533 M 533
+
Sbjct: 240 L 240
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 182/602 (30%), Positives = 300/602 (49%), Gaps = 66/602 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
V + +++ L ++G+++ A LFD+M K+V+ W ++++G +NG + + +F M
Sbjct: 48 VVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVE 107
Query: 109 ---VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL-----KHGRLE 160
N + N + C D + A + ++ R +A I L + G L
Sbjct: 108 SGVAPNDFACNAALVACADLGALR-AGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA--------------------------- 193
A +F++M +V+ YT+++ F + GE + A
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226
Query: 194 RALSDY----------MSFKNVVSWTVMITGYVKNERF-------------CEA----RE 226
R L + ++V S T +I Y +NE C + R+
Sbjct: 227 RVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQ 286
Query: 227 LFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
L +D ++ V A+++ + + G++E + +I+ D VS+ I+ QNG
Sbjct: 287 LHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGF 346
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
E+A+ L M P+ SV ++C+ + L++G Q H L ++ G ++ + NA
Sbjct: 347 GEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNA 406
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+I MYS+CG + + LAF +H+ ++ SWN++I AQHG KAL FS+M NG PD
Sbjct: 407 LINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPD 466
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
TFL +L C H+G V E F LM+ Y P+ HY C++D+L R G+ ++A ++
Sbjct: 467 DSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMI 526
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
MPFE D +W +LLA+C ++ N+++G+LAA ++ EL ++SA YV++SN+YA G W
Sbjct: 527 NDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWE 586
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVD 584
D +VR M E GV K SWIEI N+VH F DMSHP D I+ L M+ D
Sbjct: 587 DARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQDFD 646
Query: 585 DF 586
+
Sbjct: 647 EL 648
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 89/395 (22%)
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+V+ L+ +K G + A L D M KNVV+WT +++G +N R A +F M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMV 106
Query: 233 D-------------------------------------YDKNVFVVTAMITGFCKVGMLE 255
+ + + ++ + +I + + G L
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC- 314
A+ +F+R+ D V + ++I+ + +NG E A M+K ++P++ T+ ++ TAC
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226
Query: 315 -----------------------SALQLL-----NE---------------------GRQ 325
S+ L+ NE GRQ
Sbjct: 227 RVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQ 286
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H I++ ++ V NA+++MY R G + + E +I +P+LVSW T I+A Q+G
Sbjct: 287 LHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGF 346
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
EKA+ QM GF P+G F S+LS+C +++ M L +K+ G
Sbjct: 347 GEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKL-GCDSEICTGN 405
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
L+++ S+ GQ+ A ++ + D W SL+
Sbjct: 406 ALINMYSKCGQMGSA-RLAFDVMHTHDVTSWNSLI 439
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 39 NCL-IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CL ++L + NA I+ S+ G++ +AR FD M T DV +WN++I G+ Q+G
Sbjct: 389 HCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDA 448
Query: 98 QESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNA 148
++ +F M I ++ ++ GC + +++ +F+ M ++ + T Y
Sbjct: 449 NKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC 508
Query: 149 MISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDY---MSFKN 204
MI ++GR +EA R+ MP + + + +L +D + +D +S ++
Sbjct: 509 MIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRD 568
Query: 205 VVSWTVMITGYVKNERFCEARELFYRM 231
S+ +M Y + + +AR++ RM
Sbjct: 569 SASYVLMSNIYAMHGEWEDARKVRRRM 595
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 279/484 (57%), Gaps = 16/484 (3%)
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+K +F M VKNI +WN +I+ + + + + A F+ MP+R+ ++N+MISG+ + G
Sbjct: 196 AKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYN 255
Query: 160 EEATRLFEQM---PRRNVISYT--AMLDGFMKKGEVDKARALSDY-MSFKNVVSWTV--- 210
EA +F +M P ++T ++L +++ + + Y + + S V
Sbjct: 256 LEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNA 315
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+I+ Y K+ AR + + N+ T+++ G+ K+G ++ AR +F +++ +D V
Sbjct: 316 LISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVV 375
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++ AMI GY QNG+ +AL LF M+ +P+ TL ++ + S+L +L G+Q H
Sbjct: 376 AWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASA 435
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN----LVSWNTIIAAFAQHGHY 386
I+ G + SV NA+I MY++ G I +A R PN +VSW ++I A AQHG
Sbjct: 436 IKAGESSTPSVTNALIAMYAKTGNI---NVAKRVFDLPNGKKEIVSWTSMIMALAQHGLG 492
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++A+ F +M G PD IT++ +LSAC H G V + + +M +V+ I P+ HY C
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
++D+ RAG L++A+ + MP E D WGSLLA+C I+ N +L ++AA+++ +DP N
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
S Y+ L+N+Y+A G W + + R LMK++GV K+ SWI I N+VH F D+ HP
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQK 672
Query: 567 DKIH 570
D+I+
Sbjct: 673 DEIY 676
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 139/582 (23%), Positives = 260/582 (44%), Gaps = 135/582 (23%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L V V + ++ ++ G A+ +FD+MT K++ TWNA+I+ Y Q+G + +
Sbjct: 168 VVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELA 227
Query: 101 KNLFQSMPVKNIVSWNCMIAG------------------------------------CID 124
+ F+ MP ++IVSWN MI+G C +
Sbjct: 228 ASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACAN 287
Query: 125 NDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEEATRLFE--QMPRRNVISYT 178
++++ +A E + A NA+IS + K G +E A + E + N+I++T
Sbjct: 288 LEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFT 347
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------ 232
++LDG+ K G V AR + + + ++VV+WT MI GYV+N + +A ELF M
Sbjct: 348 SLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEP 407
Query: 233 ------------------DYDKNVF-------------VVTAMITGFCKVGMLENARLLF 261
++ K + V A+I + K G + A+ +F
Sbjct: 408 NSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF 467
Query: 262 ERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
+ K+ VS+ +MI AQ+G+ +EA+ LF M+ + M+PD T V V +AC+ + L+
Sbjct: 468 DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLV 527
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIA 378
+GR+ + ++ ++H P L + +I
Sbjct: 528 EQGRKYYNMMT--------------------------------EVHEIEPTLSHYACMID 555
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+ + G ++A +F M + +PD I + SLL++C K++++ DL ++ + +I
Sbjct: 556 LYGRAGLLQEAYLFIESMPI---EPDNIAWGSLLASC----KIHKNADLAKVAAERLLLI 608
Query: 439 P--SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
+S Y L ++ S G+ E A Q + M D GV I++ E+
Sbjct: 609 DPGNSGAYLALANVYSACGKWENAAQTRKLM---KDRGVRKE-KGISWIHIKNEVHAFGV 664
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
+ + + PQ +Y ++ A +W ++ ++ + + V
Sbjct: 665 EDV--IHPQKDEIYKLM------AEIWEEIKKMGFIPDTESV 698
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 212/425 (49%), Gaps = 49/425 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V++ N ++ ++ G + A +FD+M K +WN +I+GY + G + S+ L MP
Sbjct: 45 VYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPD 104
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM-PER---NTATYNAMISGFLKHGRLEEATRL 165
+ VSW +I G D+A F M ER + T + ++S + L+ ++
Sbjct: 105 CDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKI 164
Query: 166 FEQMPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ + + S T++L+ + K G+ A+ + D M+ KN+ +W +I+ Y+++ +F
Sbjct: 165 HSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQF 224
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
A F +MPD +D VS+N+MI+GY+Q
Sbjct: 225 ELAASQFEKMPD---------------------------------RDIVSWNSMISGYSQ 251
Query: 282 NGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
G EAL +FS M+ + ++PD+ TL S+ +AC+ L+ LN G+Q H ++R E + +
Sbjct: 252 QGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNL--VSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V NA+I+MY++ GG+ + L + NL +++ +++ + + G+ + A F+++
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLR- 370
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
D D + + +++ G N++++LF LMV G P+S ++ + S LE
Sbjct: 371 ---DRDVVAWTAMIVGYVQNGLWNDALELFRLMVN-EGPEPNSYTLAAMLSVSSSLTILE 426
Query: 459 KAWQI 463
QI
Sbjct: 427 HGKQI 431
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GR H +I+ G V + N ++T Y++ G + + F ++ + SWNT+I+ +A+
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
G++E + +M D D +++ +++ G + ++ +F M+
Sbjct: 89 QGNFEVSRRLLYEMP----DCDPVSWTAIIVGYNQFGLFDNAIWMFAKMI 134
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 280/498 (56%), Gaps = 26/498 (5%)
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATY-----NAMI 150
++F+ N+ +N +I G +N R + + +F M P+R T + A++
Sbjct: 93 SIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALV 152
Query: 151 S---GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN--- 204
G HG + + F+ R +++D ++K GE+ L D +N
Sbjct: 153 DVGLGRCLHGGVMKLGLEFDSFVR------VSLVDMYVKIGELGFGLQLFDESPQRNKAE 206
Query: 205 -VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
++ W V+I G K +A LF MP+ +N ++I GF + G L+ AR LF +
Sbjct: 207 SILLWNVLINGCCKVGDLSKAASLFEAMPE--RNAGSWNSLINGFVRNGDLDRARELFVQ 264
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ K+ VS+ MI G++QNG E+AL +F M++ ++P+D T+VS AC+ + L G
Sbjct: 265 MPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVG 324
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+ H + NGF+ N + A++ MY++CG I + F + +L++W+ +I +A H
Sbjct: 325 ERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIH 384
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +++AL F +M G +PD + FL++L+AC H+G V++ ++ FE M Y I P+ +H
Sbjct: 385 GCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKH 444
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
YT +VD+L RAG+L++A Q MP D +WG+L AC + N+E+ EL A+K+ +L+
Sbjct: 445 YTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLE 504
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P++ YV LSN+YAA G W DV RVR LMK +GV K +S+IE+ +VH F+ GD +H
Sbjct: 505 PKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAH 564
Query: 564 PCIDKIHLELKRASVQMK 581
++I L+L+ + K
Sbjct: 565 VRAEEISLKLEEITASAK 582
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 171/372 (45%), Gaps = 42/372 (11%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKD----VITWNAIITGYWQNGFLQESKNLFQS 106
FV + + + G++ QLFD+ ++ ++ WN +I G + G L ++ +LF++
Sbjct: 174 FVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEA 233
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEAT--- 163
MP +N SWN +I G + N +D A + F MPE+N ++ MI+GF ++G E+A
Sbjct: 234 MPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMF 293
Query: 164 -RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
R+ E+ R N ++ + L K G + + +Y+S
Sbjct: 294 WRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNG------------------ 335
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+ N + TA++ + K G +++A +F + KD ++++ MI G+A +
Sbjct: 336 -----------FQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIH 384
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVLVIRNGFEANVSV 341
G ++AL+ F M + PD+ +++ TACS +++G + + E +
Sbjct: 385 GCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKH 444
Query: 342 CNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIAAFAQHGHYEKALIFFSQ-MGL 398
++ + R G LD L+F Q +P+ V W + A H + E A + + + L
Sbjct: 445 YTLIVDLLGRAGR-LDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQL 503
Query: 399 NGFDPDGITFLS 410
P FLS
Sbjct: 504 EPKHPGSYVFLS 515
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 140/302 (46%), Gaps = 19/302 (6%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N VVT +I+ C + L+ A +F + FNA+I G A+N E ++ F M+
Sbjct: 71 NSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLML 130
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG--- 353
++ ++PD TL V + +AL + GR H V++ G E + V +++ MY + G
Sbjct: 131 RLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELG 190
Query: 354 -GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G+ + + ++ + +++ WN +I + G KA F M + + ++ SL+
Sbjct: 191 FGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMP----ERNAGSWNSLI 246
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA----WQITQGMP 468
+ G ++ + +LF M + + +T +++ S+ G EKA W++ +
Sbjct: 247 NGFVRNGDLDRARELFVQMPEKNVV-----SWTTMINGFSQNGDHEKALSMFWRMLEEGV 301
Query: 469 FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ-NSAVYVMLSNLYAAAGMWRDVT 527
D V +LLA I +++GE + Q N + L ++YA G + +
Sbjct: 302 RPNDLTVVSALLACTKIGA-LQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSAS 360
Query: 528 RV 529
RV
Sbjct: 361 RV 362
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 273/485 (56%), Gaps = 12/485 (2%)
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
++++ N ++ ++ +DDA F MPER+ ++ ++ G+ + G +EA RLF +M
Sbjct: 176 ESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRM 235
Query: 170 P-----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE- 223
R N ++ A + + G + L Y++ V + V C
Sbjct: 236 VVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGC 295
Query: 224 ---ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
ARE+F M K+V+ T+M+ + K G LE+A LF+ + ++ VS++ MIA Y+
Sbjct: 296 VRYAREVFDGMEV--KDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYS 353
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV-LVIRNGFEANV 339
Q EEA+ LF MI + P DATLVSV +AC+ L L+ GR + ++ N V
Sbjct: 354 QLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTV 413
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
++ NA+I M+++CG + ++ F ++ N+VSWNT+I A A HG E+A+ F Q+
Sbjct: 414 NLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGE 473
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
PD ITFL LL++C H+G V+E F+ M Y I P EHY C++D+L + G LE+
Sbjct: 474 NIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEE 533
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
A+++ +GMP EAD WG+LL AC ++ NVE+G A K+ ELDP +S +YV++S +YA+
Sbjct: 534 AFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYAS 593
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQ 579
W V +R+ M+++GV K S IE+ K H FL D+SH C ++I+ LK
Sbjct: 594 KNKWDQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDFLVADVSHACSEEIYSALKNIYFH 653
Query: 580 MKSVD 584
+K D
Sbjct: 654 LKQED 658
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 139/282 (49%), Gaps = 21/282 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V ++NA + + G + AR++FD M KDV +W +++ Y + G L+ ++ LF+ MP
Sbjct: 280 VNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPR 339
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
+N+VSW+CMIA ++ ++A F+ M AT +++S + G L+ +
Sbjct: 340 RNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWI 399
Query: 166 FEQMPRRNVISYT-----AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+E N I T A++D F K G+V +A L D M+ +NVVSW MI + + +
Sbjct: 400 YENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQ 459
Query: 221 FCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFE------RIQPKDCVSF 272
EA LF ++ + + ++ G++ R F+ RI+P+ +
Sbjct: 460 SEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPR-VEHY 518
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
MI + G+ EEA + G M M+ D+A ++ AC
Sbjct: 519 ACMIDLLGKVGLLEEAFEVARG---MPMEADEAGWGALLNAC 557
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 173/392 (44%), Gaps = 49/392 (12%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F + V V NA + + + A ++FD+M +DV++W ++ GY + G E+ LF
Sbjct: 173 FVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLF 232
Query: 105 QSMPV-----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLK 155
M V N V+ ++ + + + E R+ NA++ F K
Sbjct: 233 CRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGK 292
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
G + A +F+ M ++V S+T+M++ + K G+++ A L M +NVVSW+ MI Y
Sbjct: 293 CGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAY 352
Query: 216 VKNERFCEARELFYRM------PDYDKNVFVVT--------------------------- 242
+ + EA LF M P V V++
Sbjct: 353 SQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLT 412
Query: 243 -----AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
A+I F K G + A LF+ + ++ VS+N MI +A +G +EEA+RLF +
Sbjct: 413 VNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKG 472
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
++ PD T + + +CS L++EGR+ + + E V +I + + G +
Sbjct: 473 ENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLE 532
Query: 357 DS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
++ E+A + W ++ A HG+ E
Sbjct: 533 EAFEVARGMPMEADEAGWGALLNACRMHGNVE 564
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 296/558 (53%), Gaps = 36/558 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ----------- 98
VF ++ ++ +I A ++FD+M +D+++WN II G+ QNGF +
Sbjct: 182 VFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQD 241
Query: 99 -----ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
+S L +P V M+ I I F N +T A+ +
Sbjct: 242 EGQRPDSITLVTVLPAAADVGL-LMVGKSIHGYAIRAGFAKLV-----NIST--ALADMY 293
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
K G +E A +F+ M ++ V+S+ +M+DG+++ GE +KA A+ + M + + V I
Sbjct: 294 SKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIM 353
Query: 214 ---------GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
G ++ +F F + ++ V+ ++I+ + K ++ A +F +
Sbjct: 354 EALHACADLGDLERGKFVHK---FVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ VS+NAMI GYAQNG EAL FS M + M+PD T+VSV A + L + +
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H L+IR+ + N+ V A++ MYS+CG I + F I ++++WN +I + HG
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
AL F +M +P+ IT+LS++SAC H+G V+E + F+ M + YG+ PS +HY
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHY 590
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
+VD+L RAG++++AW + MP V+G+ AC I+ N+E+GE AAKK+ EL+P
Sbjct: 591 GAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNP 650
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
+V+L+N+YA+ W V VR M+++G+ K S +E+ N+VH F G +HP
Sbjct: 651 DEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHP 710
Query: 565 CIDKIHLELKRASVQMKS 582
+I+ L+ ++K+
Sbjct: 711 QSKRIYAFLEELVYEIKA 728
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 149/279 (53%), Gaps = 6/279 (2%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV--- 205
++S F K+G + EA R+FE + + Y ML G+ K ++ A A M + +V
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 206 -VSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
++T ++ N +E+ ++ + NVF +T ++ + K +++A +F+
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
R+ +D VS+N +IAG++QNG A++AL L M +PD TLV+V A + + LL
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+ H IR GF V++ A+ MYS+CG + + L F + +VSWN+++ + Q
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
+G EKA+ F +M G DP G+T + L AC G +
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDL 365
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 146/303 (48%), Gaps = 9/303 (2%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y++++F T +++ F K G + A +FE I K ++ M+ GYA+N E AL
Sbjct: 78 YNEHLFQ-TKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLC 136
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M D++P + C L G++ H +I N F ANV V+ MY++C
Sbjct: 137 RMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCR 196
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I D+ F ++ +LVSWNTIIA F+Q+G +KAL +M G PD IT +++L
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLP 256
Query: 414 ACGHAG--KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
A G V +S+ + + ++ S T L D+ S+ G +E A I GM +
Sbjct: 257 AAADVGLLMVGKSIHGYAIRAGFAKLVNIS---TALADMYSKCGSVETARLIFDGMD-QK 312
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
W S++ V N E +KM E + V +M + L+A A + D+ R +
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEA-LHACADLG-DLERGKF 370
Query: 532 LMK 534
+ K
Sbjct: 371 VHK 373
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 107/332 (32%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR + V ++ A S+ G + AR +FD M K V++WN+++ GY QNG +++
Sbjct: 275 IRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAI 334
Query: 102 NLFQSM------PV---------------------------------KNIVSWNCMIAGC 122
+F+ M P +I N +I+
Sbjct: 335 AVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMY 394
Query: 123 IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR----------- 171
R+D A D F + R ++NAMI G+ ++GR+ EA F +M
Sbjct: 395 SKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMV 454
Query: 172 ----------------------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
+N+ TA++D + K G + AR L D +S +
Sbjct: 455 SVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR 514
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+V++W MI GY + A +LF +M K G +E
Sbjct: 515 HVITWNAMIDGYGTHGLGRAALDLFDKM------------------KKGAVE-------- 548
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
P D +++ ++I+ + +G+ +E LR F M
Sbjct: 549 --PND-ITYLSVISACSHSGLVDEGLRHFKSM 577
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR + +FV A + S+ G I AR+LFD ++ + VITWNA+I GY +G + +
Sbjct: 476 IIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAA 535
Query: 101 KNLFQSMPV----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
+LF M N +++ +I+ C + +D+ +F++M E + Y AM+
Sbjct: 536 LDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVD 595
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ GR++EA E MP
Sbjct: 596 LLGRAGRIKEAWDFIENMP 614
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 105/277 (37%), Gaps = 53/277 (19%)
Query: 9 QTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRA 63
+ L+ + P + I+ +C + + F Q + V N+ IS S+
Sbjct: 338 EKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKC 397
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP--------------- 108
++ A +F+ + + ++WNA+I GY QNG + E+ N F M
Sbjct: 398 KRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI 457
Query: 109 -------VKNIVSW--NCMIAGCIDND---------------RIDDAFDYFQAMPERNTA 144
V W +I C+D + I A F + +R+
Sbjct: 458 PALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVI 517
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFMKKGEVDKA-----RA 195
T+NAMI G+ HG A LF++M + N I+Y +++ G VD+
Sbjct: 518 TWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSM 577
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
DY ++ + M+ + R EA + MP
Sbjct: 578 KQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP 614
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 5/169 (2%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C++++ L+ Q LVI+NG +++++S+ G I ++ F I +
Sbjct: 59 CTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALY 115
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+T++ +A++ E AL F +M + P F LL CG + ++ ++
Sbjct: 116 HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI- 174
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ T +V++ ++ Q++ A+++ MP E D W +++A
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERDLVSWNTIIAG 222
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 188/580 (32%), Positives = 286/580 (49%), Gaps = 69/580 (11%)
Query: 19 PILRILSTPDSCGNFTP-HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT 77
P L +LST S N HS L +TQ+ + A+S G +S A LF+ +
Sbjct: 34 PSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF----- 132
+ WN +I G N S PV I + M+ ++ + F
Sbjct: 94 QPNQFIWNTMIRG-----------NSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSC 142
Query: 133 --------------DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYT 178
+ E + + ++I+ + ++G L A +F + R+ +S+T
Sbjct: 143 AKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFT 202
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD--- 235
A++ G+ +G +D AR L + + ++ VSW MI GY ++ RF EA F M +
Sbjct: 203 ALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAP 262
Query: 236 ----------------------------------KNVFVVTAMITGFCKVGMLENARLLF 261
N+ +V A+I + K G L+ AR LF
Sbjct: 263 NESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLF 322
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
E I KD +S+N MI GY+ +EAL LF M + +++P+D T VS+ AC+ L L+
Sbjct: 323 EGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALD 382
Query: 322 EGRQSHVLVIRNGFE-ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
G+ H + + N S+ ++I MY++CG I ++ F + +L SWN +I+
Sbjct: 383 LGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGL 442
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A HGH AL F QM GF+PD ITF+ +LSAC HAG V F MV+ Y I P
Sbjct: 443 AMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPK 502
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
+HY C++D+L RAG ++A + + M + D +WGSLL AC ++ NVELGE AAK +
Sbjct: 503 LQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLF 562
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
EL+P+N YV+LSN+YA AG W DV R+R + ++G+ K
Sbjct: 563 ELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/513 (36%), Positives = 285/513 (55%), Gaps = 35/513 (6%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ N +I Y + G L ++ +F VK++V+W MI G N+ +D+A
Sbjct: 186 DLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAI------- 238
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
A +N+M+S +K N ++ A+L +KG+ + + L ++
Sbjct: 239 ----ALFNSMLSSDVK----------------PNEVTMIALLSACSQKGDSEMGKTLHEH 278
Query: 200 MSFKNVVS----WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
+ K++ M+ YVK ARE+F M D VF T+++ G+ K G L
Sbjct: 279 IRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRD--VFSWTSLLNGYAKNGDLG 336
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTAC 314
+AR LF+ + ++ VS+NAMIAGY+QN EAL LF M+ + + P + TLV V +A
Sbjct: 337 SARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSAS 396
Query: 315 SALQLLNEGRQSHV-LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
L L G++ H V + G + ++ + NAV+ MY++CG I + F + NLVSW
Sbjct: 397 GQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSW 456
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N++I+A+A +GH +KAL F QM +G PD ITF+ +LSAC + G V+E FE M
Sbjct: 457 NSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMEN 516
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+G+ P EHY C+VD+LSR G L++A+++ MP EA G WG+LL AC + NVE+ +
Sbjct: 517 CFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACRKHGNVEMAK 576
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
LA +K+ ELDP++S +Y +L+N+ A W+DV VR +M+E+GV K +S IEI K
Sbjct: 577 LAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIEGKF 636
Query: 554 HYFLGGDMSHPCIDKIHLELKRASVQMKSVDDF 586
H FL D SH +I+ + + + DF
Sbjct: 637 HEFLVADTSHTRSSEIYRVVNELLLLSSLIIDF 669
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 201/421 (47%), Gaps = 53/421 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
+FV N I G + ARQ+FD+ + KDV+TW +I GY +N +L E+ LF SM
Sbjct: 187 LFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLS 246
Query: 108 -PVK-NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT----YNAMISGFLKHGRLEE 161
VK N V+ +++ C + + + ++ NAM+ ++K G L
Sbjct: 247 SDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTT 306
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
A +F M RR+V S+T++L+G+ K G++ AR L D M +N+VSW MI GY +N +
Sbjct: 307 AREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQP 366
Query: 222 CEARELFYRM-------PDYDKNVFVVT-------------------------------- 242
EA ELF+ M P D V V++
Sbjct: 367 MEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKN 426
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
A++ + K G ++ A LF + K+ VS+N+MI+ YA G A++AL LF MI ++P
Sbjct: 427 AVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKP 486
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRN--GFEANVSVCNAVITMYSRCGGILDS-E 359
D T + V +ACS ++EG Q+H + N G E ++ + SR G + ++ E
Sbjct: 487 DHITFIGVLSACSYGGFVSEG-QAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYE 545
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
L R + W ++ A +HG+ E A + + L DP+ SLL+ G
Sbjct: 546 LISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEK--LLELDPEDSGIYSLLANICADG 603
Query: 420 K 420
K
Sbjct: 604 K 604
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 178/400 (44%), Gaps = 51/400 (12%)
Query: 163 TRLFEQM-PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
T L Q+ P ++++ A+ D G++ A + D N W MI GY K
Sbjct: 78 TGLMNQIFPASRLLAFCALSD----SGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHP 133
Query: 222 CEARELFYRM-------------------------------------PDYDKNVFVVTAM 244
F +M +D ++FV +
Sbjct: 134 SMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGL 193
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
I + + G L AR +F+ KD V++ MI GYA+N +EA+ LF+ M+ D++P++
Sbjct: 194 IQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNE 253
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
T++++ +ACS G+ H + R ++++ NA++ MY +CG + + F
Sbjct: 254 VTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNN 313
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ ++ SW +++ +A++G A F +M + + +++ ++++ + E+
Sbjct: 314 MERRDVFSWTSLLNGYAKNGDLGSARKLFDEMP----ERNIVSWNAMIAGYSQNSQPMEA 369
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL-LAAC 483
++LF MV V G++P+ + C++ + G LE +I G+ SL L
Sbjct: 370 LELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCN--HVNKIGIQVSLILKNA 427
Query: 484 VINLNVELGEL--AAKKMRELDPQNSAVYVMLSNLYAAAG 521
V+++ + G + AAK + +N + + + YA+ G
Sbjct: 428 VMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYG 467
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/642 (31%), Positives = 306/642 (47%), Gaps = 116/642 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R Q V+V + I S+ G I AR +FDQ++ K +TW II GY + G S
Sbjct: 155 VVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVS 214
Query: 101 KNLFQSMPVKNIVS---------------------------------------WNCMIAG 121
LF M N+V N +I
Sbjct: 215 LELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDF 274
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR---------- 171
+R+ F M +N ++ MISG++++ EA +LF +M R
Sbjct: 275 YTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFAC 334
Query: 172 ----------------RNVISYTAML----DGFMKKGEVD---------KARALSDYMSF 202
R V +YT D F+K G +D A+ + D M+
Sbjct: 335 TSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAE 394
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM------PDY---------------------- 234
+NV+S+ MI GY E+ EA ELF+ M P
Sbjct: 395 QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQI 454
Query: 235 ---------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
++F +A+I + K +++AR +FE + KD V +NAM GY Q+
Sbjct: 455 HGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLEN 514
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EEAL+L+S + +P++ T ++ TA S L L G+Q H +++ G + V NA+
Sbjct: 515 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 574
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY++CG I ++ F ++V WN++I+ AQHG E+AL F +M G P+
Sbjct: 575 VDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNY 634
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
+TF+++LSAC HAG+V + ++ F M +GI P +EHY C+V +L R+G+L +A + +
Sbjct: 635 VTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIE 693
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
MP E VW SLL+AC I NVELG+ AA+ DP++S Y++LSN++A+ GMW D
Sbjct: 694 KMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWAD 753
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
V +VR M V K+ SWIE+ NKV+ F+ D +H D
Sbjct: 754 VKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREAD 795
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 201/442 (45%), Gaps = 79/442 (17%)
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN-- 173
N +I C +DR+D+A F MP +N T+++M+S + + G EEA +F + R++
Sbjct: 66 NILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGE 125
Query: 174 ------------------VISYTAMLDGFM--------------------KKGEVDKARA 195
V+ A L GF+ K G +++AR
Sbjct: 126 HPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARL 185
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY--------------- 234
+ D +S K V+WT +I GY K R + ELF +M PD
Sbjct: 186 VFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEF 245
Query: 235 ----------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+ +V VV +I + K ++ R LF+++ K+ +S+ MI+G
Sbjct: 246 LEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISG 305
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
Y QN EA++LF M ++ +PD SV T+C + + L +GRQ H I+ E++
Sbjct: 306 YMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESD 365
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V N +I MY++ ++D++ F + N++S+N +I ++ +AL F +M +
Sbjct: 366 EFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRV 425
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
F P +TF+SLL + S + L++K +G+ + L+D+ S+ ++
Sbjct: 426 RLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIK-FGVSLDLFAGSALIDVYSKCSYVK 484
Query: 459 KAWQITQGMPFEADTGVWGSLL 480
A + + M E D VW ++
Sbjct: 485 DARHVFEEMN-EKDIVVWNAMF 505
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H +I +G +++ + N +I + S+ + ++ + F ++ NL++W+++++ ++Q G+
Sbjct: 50 HGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYS 109
Query: 387 EKALIFFSQMGL-NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E+AL+ F + +G P+ S++ AC G V + L +V+ G T
Sbjct: 110 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVR-SGFDQDVYVGT 168
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+D S+ G +E+A + + E W +++A
Sbjct: 169 SLIDFYSKNGNIEEARLVFDQLS-EKTAVTWTTIIAG 204
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/599 (29%), Positives = 305/599 (50%), Gaps = 77/599 (12%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V A + R G + A +LF Q+ + N+++ GY + + + F+ M ++
Sbjct: 175 VETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD 234
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRL----EEAT 163
+VSWN MIA + R+ +A M + ++ TY + ++ + L +
Sbjct: 235 VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHA 294
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
++ +P+ + +A+++ + K G +A+ + + + +N VSWTV+I G ++ E F +
Sbjct: 295 KVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSK 354
Query: 224 ARELFYRM-------------------------------------PDYDKNVFVVTAMIT 246
+ ELF +M +++ + V ++I+
Sbjct: 355 SVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLIS 414
Query: 247 GFCKVGMLENARLLFERIQPKDCVS-------------------------------FNAM 275
+ K G L+NA +F + +D VS +NAM
Sbjct: 415 LYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAM 474
Query: 276 IAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+ Y Q+G E+ L+++S M+ + D+ PD T V++F C+ + G Q ++ G
Sbjct: 475 LGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAG 534
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
NVSV NA ITMYS+CG I +++ F ++ ++VSWN +I ++QHG ++A F
Sbjct: 535 LILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFD 594
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
M G PD I+++++LS C H+G V E F++M +V+GI P EH++C+VD+L RA
Sbjct: 595 DMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRA 654
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G L +A + MP + VWG+LL+AC I+ N EL ELAAK + ELD +S Y++L+
Sbjct: 655 GHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLA 714
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
+Y+ AG D +VR LM+++G+ K YSW+E+ NKVH F D+SHP + I +L
Sbjct: 715 KIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKL 773
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 204/451 (45%), Gaps = 64/451 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V +N ++ ++ G +S A +LFD+M +DV +WN +++GY+Q + F SM
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 108 ---PVKNIVSWNCMIAGCIDNDRIDDA---------FDYFQAMPERNTATYNAMISGFLK 155
+ N ++ C++ C + A FD F P+ T A++ F++
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFD-FWGDPDVET----ALVDMFVR 185
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
G ++ A+RLF Q+ R + +ML G+ K +D A + M+ ++VVSW +MI
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 216 VKNERFCEARELFYRM---------------------------------------PDYDK 236
++ R EA L M P D
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+V +A+I + K G + A+ +F +Q ++ VS+ +I G Q +++ LF+ M
Sbjct: 306 --YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMR 363
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
M D L ++ + C L GRQ H L +++G + V N++I++Y++CG +
Sbjct: 364 AELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQ 423
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
++E F + ++VSW ++I A++Q G+ KA FF M + IT+ ++L A
Sbjct: 424 NAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTR----NAITWNAMLGAYI 479
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
G + + ++ M+ + P Y L
Sbjct: 480 QHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 202/438 (46%), Gaps = 28/438 (6%)
Query: 64 GKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQESKNLFQS-MPVKNIVSWNCM 118
G ++ AR L ++ T V N ++ Y+ G L +++ L ++ + N+++ N M
Sbjct: 18 GALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIM 77
Query: 119 IAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR-----N 173
+ G + DA + F MP R+ A++N ++SG+ + R + F M R N
Sbjct: 78 MNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPN 137
Query: 174 VISYTAMLDGFMKKGEVDKARALS------DYMSFKNVVSWTVMITGYVKNERFCEAREL 227
++ ++ G + A L D+ +V T ++ +V+ A L
Sbjct: 138 AFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMFVRCGYVDFASRL 195
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F ++ +F +M+ G+ K+ +++A FE + +D VS+N MIA +Q+G E
Sbjct: 196 FSQIER--PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVRE 253
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL L M + ++ D T S TAC+ L L G+Q H VIR+ + + V +A+I
Sbjct: 254 ALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIE 313
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
+Y++CG +++ F + N VSW +I Q+ + K++ F+QM D
Sbjct: 314 LYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFA 373
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKV---YGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+L+S C + + L L +K I+ S+ L+ + ++ G L+ A +
Sbjct: 374 LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS----LISLYAKCGDLQNAEFVF 429
Query: 465 QGMPFEADTGVWGSLLAA 482
M E D W S++ A
Sbjct: 430 SSMS-ERDIVSWTSMITA 446
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 290/566 (51%), Gaps = 69/566 (12%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI---- 112
++ S G++S AR+LFD+ DV WNAI+ Y ++GF + ++ M V +
Sbjct: 114 VNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDG 173
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
S+ C++ C A+P A+ G HG++ F
Sbjct: 174 FSFPCVLKAC-------------SALP--------ALEMGRRVHGQI------FRHGFES 206
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM- 231
+V ++ + K GE+ +A A+ + + +VSWT +I+GY +N + EA +F M
Sbjct: 207 DVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMR 266
Query: 232 -----PDYDKNVFVVTA-------------------------------MITGFCKVGMLE 255
PD+ V V+ A + + + K G +
Sbjct: 267 KTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVM 326
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
ARL F +++ + +NAMI+GY +NG AEEA+ LF M +++PD T+ S AC+
Sbjct: 327 VARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACA 386
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+ L R + + F +V V ++I Y++CG + + F +I ++V W+
Sbjct: 387 QIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSA 446
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
++ + HG +++I F M G P+ +TF+ LL+AC ++G V E DLF M + Y
Sbjct: 447 MMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDY 505
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
GI P +HY C+VD+L RAG L++A+ MP E VWG+LL+AC I+ +V LGE A
Sbjct: 506 GIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYA 565
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
A+++ LDP N+ YV LSNLYA++ +W V +VR+LM+E+G+TK YS IEI K+
Sbjct: 566 AERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQA 625
Query: 556 FLGGDMSHPCIDKIHLELKRASVQMK 581
F GD +HP +I E++ ++K
Sbjct: 626 FQAGDKTHPRSKEIFEEVEDLERRLK 651
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 164/381 (43%), Gaps = 75/381 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV N ++ ++ G+I A +F ++ + +++W +II+GY QNG E+ +F M
Sbjct: 208 VFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRK 267
Query: 110 KNI-VSWNCMIA------------------GCIDNDRIDDAFD----------------- 133
N+ W +++ GC+ ++ FD
Sbjct: 268 TNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMV 327
Query: 134 ---YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMK 186
+F + + +NAMISG++K+G EEA LF M +N+ I+ T+ + +
Sbjct: 328 ARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQ 387
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
G ++ AR + +Y+S M ++ +V V T++I
Sbjct: 388 IGSLELARWMDEYIS-----------------------------MSEFRNDVIVNTSLID 418
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ K G ++ AR +F+RI KD V ++AM+ GY +G E++ LF M + + P+D T
Sbjct: 419 TYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVT 478
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF--RQ 364
V + TAC L+ EG + G E V+ + R G LD F
Sbjct: 479 FVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGH-LDRAYNFVMNM 537
Query: 365 IHSPNLVSWNTIIAAFAQHGH 385
P + W +++A H H
Sbjct: 538 PIEPGVSVWGALLSACKIHRH 558
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 99/176 (56%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
F++ ++ +G + AR LF++ D +NA++ Y+++G A+ +++ M
Sbjct: 108 FLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVA 167
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ PD + V ACSAL L GR+ H + R+GFE++V V N ++ +Y++CG I+ +
Sbjct: 168 CVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRA 227
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
F ++ +VSW +II+ +AQ+G +AL FS+M PD I +S+L A
Sbjct: 228 NAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRA 283
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ S G + + F + P++ WN I+ +++HG + A+ +++M + PD
Sbjct: 113 LVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPD 172
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
G +F +L AC ++ E+ +V+G I
Sbjct: 173 GFSFPCVLKACS-------ALPALEMGRRVHGQI 199
>gi|255542634|ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548341|gb|EEF49832.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 736
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 250/455 (54%), Gaps = 37/455 (8%)
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+ K G +A ++F+ MP R+ +S+ M+ GF++ G++D R + D M +NV++WT +I
Sbjct: 2 YFKCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLERNVITWTAII 61
Query: 213 TGYVKNERFCEARELFYRM------PDY-------------------------------D 235
+G +NE + ++ LF +M P++
Sbjct: 62 SGLSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGLQALEKGRQIHGLVWKLGIQ 121
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
N+ + +A++ + K G LE+AR +FE D VS ++ G+ QNG EEA+ F M
Sbjct: 122 SNLCIESALMDLYSKCGSLEDARRVFESAVELDEVSMTVILVGFTQNGFEEEAIEFFVKM 181
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ + + D + +V AC L G+Q H LVI+ +N V N +I MYS+CG +
Sbjct: 182 VNIGTEVDPNMVSAVLGACGVDTSLGLGKQIHSLVIKRSLGSNPFVGNGLINMYSKCGEL 241
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+S F + N VSWN++IAAFA+HG +AL + +M G P +TFLSLL AC
Sbjct: 242 QESIKVFNGLTCRNSVSWNSMIAAFARHGDGFRALRLYEEMIQEGAVPTDLTFLSLLHAC 301
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
H G V++ M + M KVYGI P +EHY C+VD+L RAG L +A + + + + D +
Sbjct: 302 SHVGLVDKGMKFLKSMTKVYGISPRAEHYACVVDMLGRAGLLNEAKSLIERLSIKPDVLI 361
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
W +LL AC I + E+G+ AA+++ L+P+ A YV+L+N+Y++ G W + R MKE
Sbjct: 362 WQALLGACSIRGDTEIGKYAAEQLLLLEPKKPAPYVLLANIYSSKGRWDERARTIKRMKE 421
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
GV K+ SWIEI KVH F+ D HP + I+
Sbjct: 422 MGVAKETGISWIEIEKKVHSFVVEDKKHPQAEIIY 456
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 174/373 (46%), Gaps = 47/373 (12%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
+ G S A ++FD M T+D ++WN +++G+ +NG L + +F M +N+++W +I+G
Sbjct: 4 KCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLERNVITWTAIISG 63
Query: 122 CIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRL----FEQMPRRN 173
N+ +D+ F M E N TY + ++ LE+ ++ ++ + N
Sbjct: 64 LSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGLQALEKGRQIHGLVWKLGIQSN 123
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-- 231
+ +A++D + K G ++ AR + + + VS TV++ G+ +N EA E F +M
Sbjct: 124 LCIESALMDLYSKCGSLEDARRVFESAVELDEVSMTVILVGFTQNGFEEEAIEFFVKMVN 183
Query: 232 --PDYDKNV---------------------------------FVVTAMITGFCKVGMLEN 256
+ D N+ FV +I + K G L+
Sbjct: 184 IGTEVDPNMVSAVLGACGVDTSLGLGKQIHSLVIKRSLGSNPFVGNGLINMYSKCGELQE 243
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
+ +F + ++ VS+N+MIA +A++G ALRL+ MI+ P D T +S+ ACS
Sbjct: 244 SIKVFNGLTCRNSVSWNSMIAAFARHGDGFRALRLYEEMIQEGAVPTDLTFLSLLHACSH 303
Query: 317 LQLLNEGRQ-SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWN 374
+ L+++G + + G V+ M R G + +++ ++ P+++ W
Sbjct: 304 VGLVDKGMKFLKSMTKVYGISPRAEHYACVVDMLGRAGLLNEAKSLIERLSIKPDVLIWQ 363
Query: 375 TIIAAFAQHGHYE 387
++ A + G E
Sbjct: 364 ALLGACSIRGDTE 376
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 32/147 (21%)
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH---------------------- 385
MY +CG D+ F + + + VSWNT+++ F ++G
Sbjct: 1 MYFKCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLERNVITWTAI 60
Query: 386 ---------YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
YE +L F QM +P+ +T+LS L+AC + + + L+ K+ G
Sbjct: 61 ISGLSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGLQALEKGRQIHGLVWKL-G 119
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQI 463
I + + L+D+ S+ G LE A ++
Sbjct: 120 IQSNLCIESALMDLYSKCGSLEDARRV 146
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 289/528 (54%), Gaps = 22/528 (4%)
Query: 57 ISALSRAGKISAARQLF-DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV-- 113
I+ S+ G++ A +F D ++V +NAII+G+ NG + ++ M ++ ++
Sbjct: 53 INMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPD 112
Query: 114 --SWNCMIAGCIDNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
++ C++ C + + M E + +A+++ +LK+G +E+A ++F ++
Sbjct: 113 KYTFPCVVRTCCEVMEVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELS 172
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN-------ERFCE 223
R+V+ + AM++G+ K G +D+A + M K V ITG + +
Sbjct: 173 IRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKT 232
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
+ +M YD V V A+I + K + +A ++FE I KD S+N++I+ + Q G
Sbjct: 233 VHGIVMKM-GYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCG 291
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA------ 337
+ LRLF M+ + PD T+ +V ACS L L GR+ H +I NG
Sbjct: 292 DHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGA 351
Query: 338 --NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
N+ V NAV+ MY++CG + ++ F + ++ SWN +I + HG+ +AL FSQ
Sbjct: 352 VDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQ 411
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M F P+ +T + +LSAC HAG V+ M +G+IP+ EHYTC++D+L RAG
Sbjct: 412 MCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAG 471
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
LE A++I Q MP +A+ VW +LL AC ++ N EL E+AA+++ +L+P++ YV++SN
Sbjct: 472 HLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSN 531
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
+Y G + +V VR MKEQ V K SWIE+ + VH F GD +H
Sbjct: 532 VYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFRTGDRTH 579
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 176/381 (46%), Gaps = 24/381 (6%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
CL+++ VFV +A ++ + G + A+++F +++ +DV+ WNA+I GY + G L E
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCI-------DNDRIDDAFDYFQAMP-ERNTATYNAMIS 151
+ +F+ M VK + I G + D D M + + NA+I
Sbjct: 195 ALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALID 254
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM----SFKNVVS 207
+ K + +A +FE + +++ S+ +++ + G+ D L D M ++V+
Sbjct: 255 MYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVT 314
Query: 208 WTVMITGYVKNERFCEARELFYRM------PDYDK----NVFVVTAMITGFCKVGMLENA 257
T ++ RE+ M D + N+ V A++ + K G + NA
Sbjct: 315 ITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNA 374
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
+F+ + KD S+N MI GY +G A EAL +FS M + + +P++ TLV V +AC+
Sbjct: 375 LKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHA 434
Query: 318 QLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNT 375
++ GR + G + VI M R G + D+ E+ + N V W
Sbjct: 435 GFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRA 494
Query: 376 IIAAFAQHGHYEKALIFFSQM 396
++ A HG+ E A I Q+
Sbjct: 495 LLGACRLHGNAELAEIAARQV 515
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ-IH 366
V+ +C+ Q LN+G+Q H L+I GF + ++I MYS+CG + ++ L F H
Sbjct: 15 VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCH 74
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
N+ ++N II+ F +G K F+ +M L G PD TF ++ C
Sbjct: 75 ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTC 123
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 292/537 (54%), Gaps = 39/537 (7%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNI 112
+ A S G+ S AR +FD+ K+V+ +N +I Y N E+ ++FQ M +
Sbjct: 78 MRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDH 137
Query: 113 VSWNCMIAGC--IDNDR----IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
++ C++ C +DN R + DA + + N NA+++ + K G L EA ++
Sbjct: 138 YTFPCVLKACSGLDNLRVGLQVHDAI--VKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+QMP R+V+S+ +M+ G+ + G+ D A + M N+
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNL--------------------- 234
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
++D + + + + ++ +FER+ K+ +S+N MIA Y N +
Sbjct: 235 ------NHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPN 288
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
EA+ LF M + M+PD T+ S+ AC L L GR+ H + + + N+ + NA++
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALL 348
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MY++CG + ++ F ++ ++VSW ++++A+ + G A+ F++M +G +PD I
Sbjct: 349 DMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSI 408
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
F+S+LSAC H G +++ F +M + YGI+P EH+ C+VD+ RAG++E+A+ +
Sbjct: 409 AFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQ 468
Query: 467 MPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
MP E + VWG+LL+AC ++ +++G +AA + +L P+ S YV+LSN+YA AGMW+DV
Sbjct: 469 MPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDV 528
Query: 527 TRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
VR MK+ G+ K S +E+ +VH FL GD HP I+ EL +MK +
Sbjct: 529 MNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKEL 585
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 159/350 (45%), Gaps = 56/350 (16%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQM 76
FP +L+ S D+ + ++++ +F+ NA ++ + G + AR++ DQM
Sbjct: 140 FPCVLKACSGLDNL-RVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQM 198
Query: 77 TTKDVITWNAIITGYWQNGFLQES------------------------------------ 100
+DV++WN+++ GY Q+G ++
Sbjct: 199 PYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQY 258
Query: 101 -KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH-GR 158
N+F+ M KN++SWN MIA ++N ++A F M E I+ L G
Sbjct: 259 IHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGD 318
Query: 159 LEE---ATRLFEQMPR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
L RL + + + N++ A+LD + K G +++AR + D M ++VVSWT M
Sbjct: 319 LSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSM 378
Query: 212 ITGYVKNERFCEARELFYRMPDYDKN--VFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
++ Y ++ + +A LF +M D +N ++++ G+L+ R F + +
Sbjct: 379 MSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYG 438
Query: 270 V-----SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ F M+ + + G EEA +S + +M M+P++ ++ +AC
Sbjct: 439 IVPRIEHFACMVDLFGRAGEVEEA---YSFIKQMPMEPNERVWGALLSAC 485
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 26/221 (11%)
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
+VI + ++ ++ YS G + F + N+V +N +I ++ + Y +
Sbjct: 61 IVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVE 120
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL F M F+PD TF +L AC + + + + +VKV G+ + LV
Sbjct: 121 ALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKV-GLDTNLFIGNALV 179
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV-----------------INLNVEL 491
+ + G L +A ++ MP+ D W S++A +NLN +
Sbjct: 180 AMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDA 238
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
G +A+ L P Y L N+ M+ +T+ L+
Sbjct: 239 GTMAS-----LSP--VVCYTSLENVQYIHNMFERMTKKNLI 272
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 246/429 (57%), Gaps = 38/429 (8%)
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY--------------- 234
+ AR L D + N+ W V+I GY N + A +L+Y+M DY
Sbjct: 126 LSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKA 185
Query: 235 ----------------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+K+VFV A+I + K G + +AR +F++I +D V +
Sbjct: 186 CAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLW 245
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N+M+A Y+QNG + L L S M+ ++P +ATLV+ +A + L +GR+ H L R
Sbjct: 246 NSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWR 305
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
FE++ V A++ MY++CG + + F ++ +VSWN +I +A HGH +AL
Sbjct: 306 QEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDL 365
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M PD ITF+ +LSAC H G + E FE M++ Y I P+ +HYTC+VD+L
Sbjct: 366 FEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLG 424
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
+G+L++A+ + M D+GVWG+LL +C I+ NVELGE+A +++ EL+P ++ YV+
Sbjct: 425 HSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVI 484
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
LSN+YA AG W V ++R LM ++ + K A SWIE+ NKVH FL GD SHP D+I+ E
Sbjct: 485 LSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSE 544
Query: 573 LKRASVQMK 581
L+R MK
Sbjct: 545 LERVGGLMK 553
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 119/224 (53%), Gaps = 1/224 (0%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+ + T ++ +C L +ARLLF+RI + +N +I GYA NG E A++L+ M
Sbjct: 109 DTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF 168
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ PD+ T V AC+AL + GR+ H V++ G+E +V V A+I MY++CG +
Sbjct: 169 DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVG 228
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F +I + V WN+++AA++Q+GH + L S+M L G P T ++ +SA
Sbjct: 229 SAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASA 288
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+ + +L L + + T LVD+ ++ G + A
Sbjct: 289 DNAALPQGRELHGLSWR-QEFESHDKVKTALVDMYAKCGSVRVA 331
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 189/420 (45%), Gaps = 58/420 (13%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN--------- 116
+S+AR LFD++ ++ WN +I GY NG + + L+ M +V N
Sbjct: 126 LSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKA 185
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
C I++ R + Q E++ A+I + K G + A +F+++ R+ +
Sbjct: 186 CAALSAIEHGR-EIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVL 244
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELF---Y 229
+ +ML + + G D +L M + + I+ N + REL +
Sbjct: 245 WNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSW 304
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
R +++ + V TA++ + K G + AR LFER+ K VS+NAMI GYA +G A EAL
Sbjct: 305 RQ-EFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEAL 363
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF M ++ +PD T V V +ACS LL EG +IR
Sbjct: 364 DLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEGWMFFETMIR----------------- 405
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
D ++ P + + ++ G ++A QM + PD +
Sbjct: 406 -------DYKI------DPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVL---PDSGVWG 449
Query: 410 SLLSACGHAGKVNESMDLFELMV-KVYGIIP-SSEHYTCLVDILSRAGQLEKAWQITQGM 467
+LL++C K++ +++L E+ + ++ + P + +Y L +I ++AG+ E ++ + M
Sbjct: 450 ALLNSC----KIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLM 505
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+ P + S+ +C A + + G+Q H V GF + + ++ +Y C + +
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
L F +I N+ WN +I +A +G YE A+ + QM G PD TF +L AC
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ ++ E +V+ G L+D+ ++ G + A ++ + D +W S+
Sbjct: 191 AIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGSAREVFDKI-LVRDAVLWNSM 248
Query: 480 LAA 482
LAA
Sbjct: 249 LAA 251
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 136/340 (40%), Gaps = 73/340 (21%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A I ++ G + +AR++FD++ +D + WN+++ Y QNG +L M +
Sbjct: 211 VFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVL 270
Query: 110 KNI----VSWNCMIAGCIDN---------------------DRIDDAF------------ 132
+ + I+ DN D++ A
Sbjct: 271 TGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRV 330
Query: 133 --DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR---RNVISYTAMLD----- 182
+ F+ + + ++NAMI+G+ HG EA LFE+M R + I++ +L
Sbjct: 331 ARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHG 390
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM---PDYDKNVF 239
G +++G + + DY V +T M+ + R EA L +M PD
Sbjct: 391 GLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSG---- 446
Query: 240 VVTAMITGFCKV-GMLENARLLFER---IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
V + CK+ +E + ER ++P D ++ + YAQ G E +L M
Sbjct: 447 -VWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLM 505
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNE------GRQSHVL 329
++ ACS +++ N+ G SH L
Sbjct: 506 TDRRLKKS--------IACSWIEVKNKVHAFLSGDTSHPL 537
>gi|449456490|ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 300/566 (53%), Gaps = 44/566 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V +A + + IS A+Q+FD++ K+ + W+ ++ GY + + ++ +LF +P ++
Sbjct: 140 VGSALVYFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRD 199
Query: 112 IVSWNCMIAGCIDNDR-IDDAFDYFQAMP-----ERNTATYNAMIS----------GFLK 155
+V+W MI+ ++ + F +M E N T+++++ G +
Sbjct: 200 VVAWTTMISAYARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVV 259
Query: 156 HGRL-------------------------EEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
HG L + A +++ M R + + ++L+G + G +
Sbjct: 260 HGILTKYGFHFDHSVCSALILFYCQCEAIDNAKAVYDSMERPCLKASNSLLEGLIFAGRI 319
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCK 250
+ A + + KN VS+ +M+ GY + R ++ LF RM K + MI+ + +
Sbjct: 320 NDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERMTH--KTTSSLNTMISVYSR 377
Query: 251 VGMLENARLLFERIQPK-DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
G ++ A LFE ++ + D V++N+MI+G QN E AL+L+ M + ++ +T +
Sbjct: 378 NGEIDKAFKLFESVKSEGDPVTWNSMISGCIQNHQHEGALKLYITMCRTSVERSRSTFSA 437
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+F AC+ L+ + G+ HV IR F++NV V ++I MY++CG I D++ +F + PN
Sbjct: 438 LFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCFPN 497
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ ++ +I + HG +A F +M + P+G T L +LSAC AG V E M +F
Sbjct: 498 VAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVFH 557
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
M K YG+IP+ EHY C+VD+L R+G+L +A + MP EAD +WG+LL AC +++
Sbjct: 558 SMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWMDL 617
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
ELGE AKK+ LDP+ + Y++LSN+YA G W + VR + V K SWI++
Sbjct: 618 ELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRQLMSLKVKKIRGCSWIDV 677
Query: 550 GNKVHYFLGGDMSHPCIDKIHLELKR 575
NK F GD SHP + I+ L+
Sbjct: 678 NNKTCVFSAGDRSHPNCNAIYSTLEH 703
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 200/415 (48%), Gaps = 31/415 (7%)
Query: 90 GYWQNGFLQESKNLFQSM------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT 143
G W++ + LF ++ NI+S N I+ + + +D A F MP R+
Sbjct: 9 GTWKHNRWKACLELFSTLCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSV 68
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARAL--- 196
++N MISG+ K G+ EA L +M NV +++++L G + +
Sbjct: 69 VSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCL 128
Query: 197 ---SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
S F+ V S ++ Y A+++F + +DKN + ++ G+ K +
Sbjct: 129 VLKSGLQIFERVGS--ALVYFYANINDISGAKQVFDEL--HDKNDLLWDLLLVGYVKCNL 184
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQN-GVAEEALRLFSGM-IKMDMQPDDATLVSVF 311
+++A LF +I +D V++ MI+ YA++ + L LF M + +++P++ T SV
Sbjct: 185 MDDALDLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVV 244
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
AC ++ L+ G+ H ++ + GF + SVC+A+I Y +C I +++ + + P L
Sbjct: 245 RACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDNAKAVYDSMERPCLK 304
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ N+++ G A F ++ + + +++ +L +G++ S LFE M
Sbjct: 305 ASNSLLEGLIFAGRINDAEEIFCKLR----EKNPVSYNLMLKGYATSGRIEGSKRLFERM 360
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
++ ++ + SR G+++KA+++ + + E D W S+++ C+ N
Sbjct: 361 TH-----KTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGCIQN 410
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 182/403 (45%), Gaps = 45/403 (11%)
Query: 25 STPDSCGNFTPHSSNCLIRLFSTQYVF-----VNNAKISALSRAGKISAARQLFDQMTTK 79
S +CG S ++ T+Y F V +A I + I A+ ++D M
Sbjct: 242 SVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDNAKAVYDSMERP 301
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
+ N+++ G G + +++ +F + KN VS+N M+ G + RI+ + F+ M
Sbjct: 302 CLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERMT 361
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRR-NVISYTAMLDGFMKKGEVDKARALSD 198
+ T++ N MIS + ++G +++A +LFE + + +++ +M+ G ++ + + A L
Sbjct: 362 HKTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGCIQNHQHEGALKLYI 421
Query: 199 YMSFKNV----VSWTVMITGYVKNE--RFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
M +V +++ + E + +A + +D NV+V T++I + K G
Sbjct: 422 TMCRTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCG 481
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ +A+ F + + +F A+I GY +G+ EA +F M+K + P+ ATL+ + +
Sbjct: 482 SIYDAQTSFASVCFPNVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILS 541
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
ACS ++ EG V +C G++ P L
Sbjct: 542 ACSCAGMVKEGM-------------------TVFHSMEKCYGVI-----------PTLEH 571
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ ++ + G +A F M + + D + + +LL+AC
Sbjct: 572 YACVVDLLGRSGRLYEAEAFIRCMPI---EADRVIWGALLNAC 611
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/572 (30%), Positives = 301/572 (52%), Gaps = 50/572 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N+ ++ + + A +LFD M +DV++WN +++ Q+G ++E+ ++ M
Sbjct: 224 MFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS 283
Query: 110 KNI----VSWNCMIAGC----------------IDN-DRID------------------D 130
K + ++ + C I N ID +
Sbjct: 284 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKE 343
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMK 186
A F ++ +RN + +ISGFL++G E+ LF QM + + ++ G
Sbjct: 344 AKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCS 403
Query: 187 KGEVDKARALSDYM----SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
+ ++ R L + VV +I+ Y K + A +F M + K++ T
Sbjct: 404 RMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNE--KDIVSWT 461
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQ 301
+MIT + +VG + AR F+ + K+ +++NAM+ Y Q+G E+ LR++ M+ + ++
Sbjct: 462 SMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 521
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD T V++F C+ L G Q ++ G + SV NAVITMYS+CG IL++
Sbjct: 522 PDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKV 581
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F ++ ++VSWN +I ++QHG ++A+ F + G PD I+++++LS C H+G V
Sbjct: 582 FDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLV 641
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
E F++M + + I P EH++C+VD+L RAG L +A + MP + VWG+LL+
Sbjct: 642 QEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLS 701
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC I+ N EL ELAAK + ELD +S Y++++ +YA AG D ++R LM+++G+ K
Sbjct: 702 ACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN 761
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
YSW+E+ NKVH F D+SHP + I +L
Sbjct: 762 PGYSWMEVDNKVHVFKADDVSHPQVLAIRKKL 793
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 214/478 (44%), Gaps = 86/478 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLF-DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
VF+ N + A G +S AR+L + +VIT N ++ GY + G L ++ LF MP
Sbjct: 59 VFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMP 118
Query: 109 VKNIVSWNCMIAGCIDN-----------------DRIDDAFDYFQAM------------- 138
+++ SWN +++G + D +AF AM
Sbjct: 119 ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLAL 178
Query: 139 ----------PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ ++ A++ F++ G ++ A+RLF ++ + +ML G++K
Sbjct: 179 QLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTY 238
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----------------- 231
VD A L D M ++VVSW +M++ ++ R EA ++ M
Sbjct: 239 GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLT 298
Query: 232 ----------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
P D +V +A++ + K G + A+ +F + ++
Sbjct: 299 ACARLSSLRWGKQLHAQVIRNLPHIDP--YVASALVELYAKSGCFKEAKGVFNSLHDRNN 356
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V++ +I+G+ Q G E++ LF+ M M D L ++ + C + L GRQ H L
Sbjct: 357 VAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSL 416
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+++G V V N++I+MY++C + +E FR ++ ++VSW ++I A++Q G+ KA
Sbjct: 417 CLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKA 476
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
FF M + + IT+ ++L A G + + ++++M+ + P Y L
Sbjct: 477 REFFDGMS----EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 530
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 187/427 (43%), Gaps = 44/427 (10%)
Query: 81 VITWNAIITGYWQNGFLQESKNLF-QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
V N ++ Y G L +++ L + N+++ N M+ G R+ DA + F MP
Sbjct: 59 VFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMP 118
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN------------------------VI 175
R+ A++N ++SG+ + + + F M R +
Sbjct: 119 ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLAL 178
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
AM+ F + + + A AL D +V+ A LF R+ +
Sbjct: 179 QLLAMVQKFDSQDDSEVAAALVDM---------------FVRCGAVDLASRLFVRIKE-- 221
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+F +M+ G+ K +++A LF+ + +D VS+N M++ +Q+G EAL + M
Sbjct: 222 PTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM 281
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++ D T S TAC+ L L G+Q H VIRN + V +A++ +Y++ G
Sbjct: 282 QSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCF 341
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+++ F +H N V+W +I+ F Q+G + +++ F+QM D +L+S C
Sbjct: 342 KEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 401
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ L L +K G I + L+ + ++ L+ A I + M E D
Sbjct: 402 CSRMDLCLGRQLHSLCLK-SGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN-EKDIVS 459
Query: 476 WGSLLAA 482
W S++ A
Sbjct: 460 WTSMITA 466
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 35/291 (12%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q V V+N+ IS ++ + +A +F M KD+++W ++IT Y Q G + +++ F M
Sbjct: 424 QAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGM 483
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEA 162
KN+++WN M+ I + +D ++ M + TY + G G A
Sbjct: 484 SEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLG----A 539
Query: 163 TRLFEQMPRRNV--------ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
+L +Q+ R V A++ + K G + +AR + D+++ K++VSW MITG
Sbjct: 540 NKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITG 599
Query: 215 YVKNERFCEARELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
Y ++ +A E+F + PDY V A+++G G+++ + F+ ++
Sbjct: 600 YSQHGMGKQAIEIFDDILKRGAKPDYISYV----AVLSGCSHSGLVQEGKFYFDMMKRAH 655
Query: 269 CVS-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+S F+ M+ + G EA L M M+P ++ +AC
Sbjct: 656 NISPGLEHFSCMVDLLGRAGHLTEAKDLID---DMPMKPTAEVWGALLSAC 703
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 141/321 (43%), Gaps = 40/321 (12%)
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
++ Y+ +AR L M NV M+ G+ K+G L +A LF R+ +D
Sbjct: 65 LLHAYLSCGALSDARRLLL-MDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVA 123
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
S+N +++GY Q+ +L F M + D P+ TL +C AL + Q +
Sbjct: 124 SWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAM 183
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
V + + + V A++ M+ RCG + + F +I P + N+++A + + + A
Sbjct: 184 VQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHA 243
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F M + D +++ ++SA +G+V E++D+ +VD
Sbjct: 244 LELFDSMP----ERDVVSWNMMVSALSQSGRVREALDM-------------------VVD 280
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG-ELAAKKMRELDPQNSA 508
+ S+ +L D+ + S L AC ++ G +L A+ +R L +
Sbjct: 281 MQSKGVRL--------------DSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 326
Query: 509 VYVMLSNLYAAAGMWRDVTRV 529
V L LYA +G +++ V
Sbjct: 327 VASALVELYAKSGCFKEAKGV 347
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 142/323 (43%), Gaps = 59/323 (18%)
Query: 23 ILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVI 82
++S C N S+ + R + + + + I+A S+ G ++ AR+ FD M+ K+VI
Sbjct: 432 LISMYAKCDNL--QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVI 489
Query: 83 TWNAIITGYWQNGFLQESKNLFQSMPVK-----NIVSWNCMIAGCID------------- 124
TWNA++ Y Q+G ++ +++ M + + V++ + GC D
Sbjct: 490 TWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR 549
Query: 125 ----------------------NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
RI +A F + ++ ++NAMI+G+ +HG ++A
Sbjct: 550 TVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQA 609
Query: 163 TRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS-----WTVMIT 213
+F+ + +R + ISY A+L G G V + + D M + +S ++ M+
Sbjct: 610 IEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVD 669
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV-GMLENARL----LFERIQPKD 268
+ EA++L MP K V + CK+ G E A L +FE P D
Sbjct: 670 LLGRAGHLTEAKDLIDDMP--MKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSP-D 726
Query: 269 CVSFNAMIAGYAQNGVAEEALRL 291
S+ M YA G ++++ ++
Sbjct: 727 SGSYMLMAKIYADAGKSDDSAQI 749
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 270/455 (59%), Gaps = 8/455 (1%)
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK--- 192
+++ R+ + ++ +L+ G A +LF++MP R+++S+ +++ G+ +G + K
Sbjct: 59 KSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFE 118
Query: 193 --ARALSDYMSFK-NVVSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITG 247
+R + + F+ N V++ MI+ V E R + + + + V VV A I
Sbjct: 119 VLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINW 178
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K G L ++ LFE + K+ VS+N MI + QNG+AE+ L F+ ++ +PD AT
Sbjct: 179 YGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATF 238
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
++V +C + ++ + H L++ GF N + A++ +YS+ G + DS F +I S
Sbjct: 239 LAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITS 298
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
P+ ++W ++AA+A HG A+ F M G PD +TF LL+AC H+G V E
Sbjct: 299 PDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHY 358
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
FE M K Y I P +HY+C+VD+L R+G L+ A+ + + MP E +GVWG+LL AC +
Sbjct: 359 FETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYK 418
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
+ +LG AA+++ EL+P++ YVMLSN+Y+A+G+W+D +R+R LMK++G+ + S+I
Sbjct: 419 DTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYI 478
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
E GNK+H F+ GD SHP +KI +LK +MKS
Sbjct: 479 EHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKS 513
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 162/362 (44%), Gaps = 28/362 (7%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++ S ++ F+ + + R G A +LFD+M +D+++WN++I+GY G+L +
Sbjct: 57 VVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKC 116
Query: 101 KNLFQSMPVK------NIVSWNCMIAGCI------DNDRIDDAFDYFQAMPERNTATYNA 148
+ M + N V++ MI+ C+ + I F + E NA
Sbjct: 117 FEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEE--VKVVNA 174
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
I+ + K G L + +LFE + +N++S+ M+ ++ G +K A Y + V
Sbjct: 175 FINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLA---YFNMSRRVGH 231
Query: 209 TVMITGYVKNERFCEAREL---------FYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
++ R CE + + N + TA++ + K+G LE++
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSST 291
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F I D +++ AM+A YA +G +A++ F M+ + PD T + ACS L
Sbjct: 292 VFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGL 351
Query: 320 LNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTII 377
+ EG+ + R + + + ++ + R G + D+ +++ P+ W ++
Sbjct: 352 VEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Query: 378 AA 379
A
Sbjct: 412 GA 413
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 100/191 (52%), Gaps = 10/191 (5%)
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
++L++ +C +++L R H V+++ + + + ++ Y R G + +E F +
Sbjct: 35 SSLIAAVKSCVSIELC---RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN--GFDPDGITFLSLLSACGHAGKVN 422
+ +LVSWN++I+ ++ G+ K S+M ++ GF P+ +TFLS++SAC + G
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
E + L++K +G++ + ++ + G L + ++ + + + + W +++
Sbjct: 152 EGRCIHGLVMK-FGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMI-- 207
Query: 483 CVINLNVELGE 493
VI+L L E
Sbjct: 208 -VIHLQNGLAE 217
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 297/545 (54%), Gaps = 17/545 (3%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK- 110
V NA IS +++ I A +F++M +D I+WN++I+G NG E+ LF M +
Sbjct: 454 VCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQG 513
Query: 111 ---NIVSWNCMIAGCIDN-----DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
+ V+ ++ C + R+ + + T+ NA++ + +
Sbjct: 514 QELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIG-ETSLANALLDMYSNCSDWQST 572
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF----KNVVSWTVMITGYVKN 218
++F M ++NV+S+TAM+ +M+ G DK L M +V + T + + +
Sbjct: 573 NQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGD 632
Query: 219 ERFCEARELF-YRMPD-YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
E + + + Y + + +K + V A++ + K +E ARL+F+R+ KD +S+N +I
Sbjct: 633 ESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLI 692
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
GY++N E+ LFS M+ + +P+ T+ + A +++ L GR+ H +R GF
Sbjct: 693 GGYSRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFL 751
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ NA++ MY +CG +L + + F ++ NL+SW +IA + HG + A+ F QM
Sbjct: 752 EDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQM 811
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
+G +PD +F ++L AC H+G E F+ M K Y I P +HYTC+VD+LSR G
Sbjct: 812 RGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGD 871
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
L++A + + MP E D+ +W SLL C I+ NV+L E A K+ +L+P+N+ YV+L+N+
Sbjct: 872 LKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANI 931
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
YA A W V +++ + +G+ + YSWIE+ +KVH F+ + +HP ++I L
Sbjct: 932 YAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDV 991
Query: 577 SVQMK 581
+ +M+
Sbjct: 992 ARRMR 996
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 232/497 (46%), Gaps = 50/497 (10%)
Query: 62 RAGKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIV 113
+ G + AR +FD M + DV W ++++ Y + G QE+ +LF+ M P + V
Sbjct: 148 KCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAV 207
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQ 168
S C++ C+ + + + E+ A NA+I+ + + GR+E+A R+F+
Sbjct: 208 S--CVLK-CVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDS 264
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYM--SFKNVVSWTVMIT-------GY---- 215
M R+ IS+ +M+ G G A L M + S TV+ GY
Sbjct: 265 MHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIG 324
Query: 216 VKNERFCEARELFYRMPDYDKNV---FVVTAMITGFCKVGMLENARLLFERIQPKDCVS- 271
+ L + + + + + ++ + K G + +AR +F+ + K V
Sbjct: 325 KAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHV 384
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N ++ GYA+ G EE+L LF M ++ + PD+ + + + L +G +H ++
Sbjct: 385 WNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIV 444
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ GF A +VCNA+I+ Y++ I D+ L F ++ + +SWN++I+ + +G +A+
Sbjct: 445 KLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIE 504
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGH-----AGKVNESMDLFELMVKVYGIIPSSEHYTC 446
F +M G + D +T LS+L AC AG+V + VK G+I +
Sbjct: 505 LFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRV-----VHGYSVKT-GLIGETSLANA 558
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE--LDP 504
L+D+ S + QI + M + + W +++ + + L + A ++E LD
Sbjct: 559 LLDMYSNCSDWQSTNQIFRSMG-QKNVVSWTAMITS---YMRAGLFDKVAGLLQEMVLDG 614
Query: 505 QNSAVYVMLSNLYAAAG 521
V+ + S L+A AG
Sbjct: 615 IRPDVFAVTSALHAFAG 631
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 208/505 (41%), Gaps = 50/505 (9%)
Query: 10 TYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAA 69
T+ +L P R+L P + + + + N R S+ N +I L +AG ++ A
Sbjct: 31 TFRCSVLAAPAGRVLEAPTAAPS-SWSTKNPPSRALSSDV----NLRIQRLCQAGDLAGA 85
Query: 70 RQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRID 129
+L DV ++ ++ E ++L + ++ R
Sbjct: 86 LRLLGSDGGVDVRSYCMVVQ------LCGEERSLEAAKRAHALI-------------RAS 126
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR--NVISYTAMLDGFMKK 187
A A + + ++ +LK G L EA +F+ MP + +V +T+++ + K
Sbjct: 127 SA----AATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKA 182
Query: 188 GEVDKARALSDYMSFKNV------VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
G+ +A +L M V VS + + + E + V
Sbjct: 183 GDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVA 242
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
A+I + + G +E+A +F+ + P+D +S+N+MI G NG A+ LFS M +
Sbjct: 243 NALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTE 302
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE----------ANVSVCNAVITMYSR 351
T++SV AC+ L G+ H +++G + ++ + ++ MY +
Sbjct: 303 ISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVK 362
Query: 352 CGGILDSELAFRQIHSP-NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
CG + + F + S N+ WN I+ +A+ G +E++L F QM G PD
Sbjct: 363 CGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISC 422
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
LL + + +VK+ G L+ +++ + A + MP +
Sbjct: 423 LLKCITCLSCARDGLVAHGYIVKL-GFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQ 481
Query: 471 ADTGVWGSLLAACVIN-LNVELGEL 494
DT W S+++ C N LN E EL
Sbjct: 482 -DTISWNSVISGCSSNGLNSEAIEL 505
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 141/305 (46%), Gaps = 41/305 (13%)
Query: 244 MITGFCKVGMLENARLLFERIQPK--DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
++ + K G L AR +F+ + P+ D + ++++ YA+ G +EA+ LF M +
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVS 201
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD + V S+L L EG H L+ + G +V NA+I +YSRCG + D+
Sbjct: 202 PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARV 261
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F +H + +SWN++I +G + A+ FS+M G + +T LS+L AC G
Sbjct: 262 FDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLG-- 319
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD---TGVWGS 478
YG+I + H + + G+ + D +G+ +
Sbjct: 320 -------------YGLIGKAVH----------------GYSVKSGLLWGLDSVQSGIDDA 350
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL----YAAAGMWRDVTRVRLLMK 534
L + ++ + V+ G++A+ + R D +S V + NL YA G + + + + M
Sbjct: 351 ALGSKLVFMYVKCGDMASAR-RVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMH 409
Query: 535 EQGVT 539
E G+
Sbjct: 410 ELGIA 414
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 13/190 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+ +NA + + G + AR LFD++T K++I+W +I GY +GF + + LF+ M
Sbjct: 755 YASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGS 814
Query: 111 NI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEE 161
I S++ ++ C + + +F+AM E Y ++ + G L+E
Sbjct: 815 GIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKE 874
Query: 162 ATRLFEQMPRRNVIS-YTAMLDGFMKKGEVDKARALSD---YMSFKNVVSWTVMITGYVK 217
A E MP S + ++L G V A ++D + +N + ++ Y +
Sbjct: 875 ALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAE 934
Query: 218 NERFCEAREL 227
ER+ ++L
Sbjct: 935 AERWEAVKKL 944
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 270/450 (60%), Gaps = 7/450 (1%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD- 198
E + N +++ + K G LEEA LF++MP ++++S+T ++ G+ + G+ +A AL
Sbjct: 137 EDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPK 196
Query: 199 --YMSFKN---VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
++ F+ +S + +G ++ F YD NV V ++++ + +
Sbjct: 197 MLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAH 256
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ A+++F + K+ VS+NA+IAG+A+ G E +RLF M++ +P T SVFTA
Sbjct: 257 MREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTA 316
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C++ L +G+ H VI++G + + N +I MY++ G I D++ FR++ ++VSW
Sbjct: 317 CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSW 376
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N+II+ +AQHG +AL F QM P+ ITFLS+L+AC H+G ++E FELM K
Sbjct: 377 NSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-K 435
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+ I H+ +VD+L RAG+L +A + + MP + VWG+LL +C ++ N++LG
Sbjct: 436 KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGV 495
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
AA+++ ELDP +S +V+LSN+YA+AG D +VR +MKE GV K+ A SW+EI N+V
Sbjct: 496 YAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEV 555
Query: 554 HYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
H F+ D SHP ++I ++ S ++K +
Sbjct: 556 HVFVANDDSHPMREEIQRMWEKISGKIKEI 585
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 167/312 (53%), Gaps = 3/312 (0%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ ++ ++ ++ + K G LE A+ LF+++ KD VS+ +I+GY+Q+G A EAL LF
Sbjct: 136 FEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFP 195
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ + QP++ TL S+ A + GRQ H ++ G++ NV V ++++ MY+R
Sbjct: 196 KMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWA 255
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ ++++ F + + N+VSWN +IA A+ G E + F QM GF+P T+ S+ +
Sbjct: 256 HMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFT 315
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC +G + + + ++K G P + L+D+ +++G ++ A ++ + + + D
Sbjct: 316 ACASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDI 373
Query: 474 GVWGSLLAACVIN-LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
W S+++ + L E +L + ++ N ++ + + +G+ + L
Sbjct: 374 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFEL 433
Query: 533 MKEQGVTKQCAY 544
MK+ + Q A+
Sbjct: 434 MKKHKIEAQVAH 445
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 188/400 (47%), Gaps = 51/400 (12%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D++ N I+ Y + G L+E+++LF MP K++VSW +I+G + + +A F M
Sbjct: 139 DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKML 198
Query: 140 ERNTATYNAMISGFLK---------HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
+S LK HGR A L + NV +++LD + + +
Sbjct: 199 HLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSL-KYGYDMNVHVGSSLLDMYARWAHM 257
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDKNVFVVTA- 243
+A+ + + ++ KNVVSW +I G+ + LF +M P + V TA
Sbjct: 258 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTAC 317
Query: 244 ------------------------------MITGFCKVGMLENARLLFERIQPKDCVSFN 273
+I + K G +++A+ +F R+ +D VS+N
Sbjct: 318 ASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWN 377
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
++I+GYAQ+G+ EAL+LF M+K +QP++ T +SV TACS LL+EG+ L+ ++
Sbjct: 378 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH 437
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIF 392
EA V+ V+ + R G + ++ ++ P W ++ + H + + +
Sbjct: 438 KIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYA 497
Query: 393 FSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
Q+ L+ D LS + A AG+++++ + ++M
Sbjct: 498 AEQIFELDPHDSGPHVLLSNIYAS--AGRLSDAAKVRKMM 535
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++P+ + C+ L+ L +GR H + + FE ++ + N ++ MY++CG + +++
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F ++ + ++VSW +I+ ++Q G +AL F +M GF P+ T SLL A G
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ L +K YG + + L+D+ +R + +A I + + + W +L
Sbjct: 221 SDHHGRQLHAFSLK-YGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNAL 278
Query: 480 LAA 482
+A
Sbjct: 279 IAG 281
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
++ N I +++G I A+++F ++ +D+++WN+II+GY Q+G E+ LF+ M
Sbjct: 343 YIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA 402
Query: 108 -PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEA 162
N +++ ++ C + +D+ YF+ M E A + ++ + GRL EA
Sbjct: 403 KVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEA 462
Query: 163 TRLFEQMP 170
+ E+MP
Sbjct: 463 NKFIEEMP 470
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 154/383 (40%), Gaps = 84/383 (21%)
Query: 16 LFPPILRILSTPD---------SCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALS 61
LFP +L + P+ + G + FS +Y V V ++ + +
Sbjct: 193 LFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYA 252
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNG--------FLQESKNLFQSMPVK-NI 112
R + A+ +F+ + K+V++WNA+I G+ + G FLQ + F+ +
Sbjct: 253 RWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSS 312
Query: 113 VSWNCMIAGCIDNDR------------------------------IDDAFDYFQAMPERN 142
V C +G ++ + I DA F+ + +++
Sbjct: 313 VFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQD 372
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSD 198
++N++ISG+ +HG EA +LFEQM + V I++ ++L G +D+ + +
Sbjct: 373 IVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE 432
Query: 199 YMSFKNV---VSWTVMITGYV-KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
M + V+ V + + + R EA + MP K V + G C+ M
Sbjct: 433 LMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP--IKPTAAVWGALLGSCR--MH 488
Query: 255 EN-------ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+N A +FE + P D + YA G +A ++ M + ++ +
Sbjct: 489 KNMDLGVYAAEQIFE-LDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKE---- 543
Query: 308 VSVFTACSALQLLNEGRQSHVLV 330
ACS +++ NE HV V
Sbjct: 544 ----PACSWVEIENE---VHVFV 559
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/590 (30%), Positives = 301/590 (51%), Gaps = 77/590 (13%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V A + R G + A +LF Q+ + N+++ GY + + + F+ M ++
Sbjct: 175 VETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD 234
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRL----EEAT 163
+VSWN MIA + R+ +A M + ++ TY + ++ + L +
Sbjct: 235 VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHA 294
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
++ +P+ + +A+++ + K G +A+ + + + +N VSWTV+I G ++ E F +
Sbjct: 295 KVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSK 354
Query: 224 ARELFYRM-------------------------------------PDYDKNVFVVTAMIT 246
+ ELF +M +++ + V ++I+
Sbjct: 355 SVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLIS 414
Query: 247 GFCKVGMLENARLLFERIQPKDCVS-------------------------------FNAM 275
+ K G L+NA +F + +D VS +NAM
Sbjct: 415 LYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAM 474
Query: 276 IAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+ Y Q+G E+ L+++S M+ + D+ PD T V++F C+ + G Q ++ G
Sbjct: 475 LGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAG 534
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
NVSV NA ITMYS+CG I +++ F ++ ++VSWN +I ++QHG ++A F
Sbjct: 535 LILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFD 594
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
M G PD I+++++LS C H+G V E F++M +V+GI P EH++C+VD+L RA
Sbjct: 595 DMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRA 654
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G L +A + MP + VWG+LL+AC I+ N EL ELAAK + ELD +S Y++L+
Sbjct: 655 GHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLA 714
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
+Y+ AG D +VR LM+++G+ K YSW+E+ NKVH F D+SHP
Sbjct: 715 KIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHP 764
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 205/478 (42%), Gaps = 86/478 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFD-QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
VF+ N + A G +S AR+L + +VIT N ++ GY + G L +++ LF MP
Sbjct: 39 VFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP 98
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN--------------------- 147
+++ SWN +++G R D + F +M + N
Sbjct: 99 RRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAP 158
Query: 148 -------------------AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
A++ F++ G ++ A+RLF Q+ R + +ML G+ K
Sbjct: 159 QLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLY 218
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----------------- 231
+D A + M+ ++VVSW +MI ++ R EA L M
Sbjct: 219 GIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLT 278
Query: 232 ----------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
P D +V +A+I + K G + A+ +F +Q ++
Sbjct: 279 ACARLFSLGWGKQLHAKVIRSLPQIDP--YVASALIELYAKCGSFKEAKRVFNSLQDRNS 336
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+ +I G Q +++ LF+ M M D L ++ + C L GRQ H L
Sbjct: 337 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 396
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+++G + V N++I++Y++CG + ++E F + ++VSW ++I A++Q G+ KA
Sbjct: 397 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKA 456
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
FF M + IT+ ++L A G + + ++ M+ + P Y L
Sbjct: 457 REFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 201/438 (45%), Gaps = 28/438 (6%)
Query: 64 GKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQESKNLFQS-MPVKNIVSWNCM 118
G ++ AR L ++ T V N ++ Y G L +++ L ++ + N+++ N M
Sbjct: 18 GALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIM 77
Query: 119 IAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR-----N 173
+ G + DA + F MP R+ A++N ++SG+ + R + F M R N
Sbjct: 78 MNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPN 137
Query: 174 VISYTAMLDGFMKKGEVDKARALS------DYMSFKNVVSWTVMITGYVKNERFCEAREL 227
++ ++ G + A L D+ +V T ++ +V+ A L
Sbjct: 138 AFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMFVRCGYVDFASRL 195
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
F ++ +F +M+ G+ K+ +++A FE + +D VS+N MIA +Q+G E
Sbjct: 196 FSQIER--PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVRE 253
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL L M + ++ D T S TAC+ L L G+Q H VIR+ + + V +A+I
Sbjct: 254 ALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIE 313
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
+Y++CG +++ F + N VSW +I Q+ + K++ F+QM D
Sbjct: 314 LYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFA 373
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKV---YGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+L+S C + + L L +K I+ S+ L+ + ++ G L+ A +
Sbjct: 374 LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS----LISLYAKCGDLQNAEFVF 429
Query: 465 QGMPFEADTGVWGSLLAA 482
M E D W S++ A
Sbjct: 430 SSMS-ERDIVSWTSMITA 446
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 177/572 (30%), Positives = 301/572 (52%), Gaps = 50/572 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N+ ++ + + A +LFD M +DV++WN +++ Q+G ++E+ ++ M
Sbjct: 204 MFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS 263
Query: 110 KNI----VSWNCMIAGC----------------IDN-DRID------------------D 130
K + ++ + C I N ID +
Sbjct: 264 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKE 323
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMK 186
A F ++ +RN + +ISGFL++G E+ LF QM + + ++ G
Sbjct: 324 AKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCS 383
Query: 187 KGEVDKARALSDYM----SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
+ ++ R L + VV +I+ Y K + A +F M + K++ T
Sbjct: 384 RMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNE--KDIVSWT 441
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQ 301
+MIT + +VG + AR F+ + K+ +++NAM+ Y Q+G E+ LR++ M+ + ++
Sbjct: 442 SMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 501
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD T V++F C+ L G Q ++ G + SV NAVITMYS+CG IL++
Sbjct: 502 PDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKV 561
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F ++ ++VSWN +I ++QHG ++A+ F + G PD I+++++LS C H+G V
Sbjct: 562 FDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLV 621
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
E F++M + + I P EH++C+VD+L RAG L +A + MP + VWG+LL+
Sbjct: 622 QEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLS 681
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC I+ N EL ELAAK + ELD +S Y++++ +YA AG D ++R LM+++G+ K
Sbjct: 682 ACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN 741
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
YSW+E+ NKVH F D+SHP + I +L
Sbjct: 742 PGYSWMEVDNKVHVFKADDVSHPQVLAIRKKL 773
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 214/478 (44%), Gaps = 86/478 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLF-DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
VF+ N + A G +S AR+L + +VIT N ++ GY + G L ++ LF MP
Sbjct: 39 VFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMP 98
Query: 109 VKNIVSWNCMIAGCIDN-----------------DRIDDAFDYFQAMP------------ 139
+++ SWN +++G + D +AF AM
Sbjct: 99 ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLAL 158
Query: 140 -----------ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ ++ A++ F++ G ++ A+RLF ++ + +ML G++K
Sbjct: 159 QLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTY 218
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM----------------- 231
VD A L D M ++VVSW +M++ ++ R EA ++ M
Sbjct: 219 GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLT 278
Query: 232 ----------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
P D +V +A++ + K G + A+ +F + ++
Sbjct: 279 ACARLSSLRWGKQLHAQVIRNLPHIDP--YVASALVELYAKSGCFKEAKGVFNSLHDRNN 336
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V++ +I+G+ Q G E++ LF+ M M D L ++ + C + L GRQ H L
Sbjct: 337 VAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSL 396
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+++G V V N++I+MY++C + +E FR ++ ++VSW ++I A++Q G+ KA
Sbjct: 397 CLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKA 456
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
FF M + + IT+ ++L A G + + ++++M+ + P Y L
Sbjct: 457 REFFDGMS----EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 510
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 187/427 (43%), Gaps = 44/427 (10%)
Query: 81 VITWNAIITGYWQNGFLQESKNLF-QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
V N ++ Y G L +++ L + N+++ N M+ G R+ DA + F MP
Sbjct: 39 VFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMP 98
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN------------------------VI 175
R+ A++N ++SG+ + + + F M R +
Sbjct: 99 ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLAL 158
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
AM+ F + + + A AL D +V+ A LF R+ +
Sbjct: 159 QLLAMVQKFDSQDDSEVAAALVDM---------------FVRCGAVDLASRLFVRIKE-- 201
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+F +M+ G+ K +++A LF+ + +D VS+N M++ +Q+G EAL + M
Sbjct: 202 PTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM 261
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++ D T S TAC+ L L G+Q H VIRN + V +A++ +Y++ G
Sbjct: 262 QSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCF 321
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+++ F +H N V+W +I+ F Q+G + +++ F+QM D +L+S C
Sbjct: 322 KEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 381
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ L L +K G I + L+ + ++ L+ A I + M E D
Sbjct: 382 CSRMDLCLGRQLHSLCLK-SGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN-EKDIVS 439
Query: 476 WGSLLAA 482
W S++ A
Sbjct: 440 WTSMITA 446
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 35/291 (12%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q V V+N+ IS ++ + +A +F M KD+++W ++IT Y Q G + +++ F M
Sbjct: 404 QAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGM 463
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEA 162
KN+++WN M+ I + +D ++ M + TY + G G A
Sbjct: 464 SEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLG----A 519
Query: 163 TRLFEQMPRRNV--------ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
+L +Q+ R V A++ + K G + +AR + D+++ K++VSW MITG
Sbjct: 520 NKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITG 579
Query: 215 YVKNERFCEARELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
Y ++ +A E+F + PDY V A+++G G+++ + F+ ++
Sbjct: 580 YSQHGMGKQAIEIFDDILKRGAKPDYISYV----AVLSGCSHSGLVQEGKFYFDMMKRAH 635
Query: 269 CVS-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+S F+ M+ + G EA L M M+P ++ +AC
Sbjct: 636 NISPGLEHFSCMVDLLGRAGHLTEAKDLID---DMPMKPTAEVWGALLSAC 683
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 141/321 (43%), Gaps = 40/321 (12%)
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
++ Y+ +AR L M NV M+ G+ K+G L +A LF R+ +D
Sbjct: 45 LLHAYLSCGALSDARRLLL-MDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVA 103
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
S+N +++GY Q+ +L F M + D P+ TL +C AL + Q +
Sbjct: 104 SWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAM 163
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
V + + + V A++ M+ RCG + + F +I P + N+++A + + + A
Sbjct: 164 VQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHA 223
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F M + D +++ ++SA +G+V E++D+ +VD
Sbjct: 224 LELFDSMP----ERDVVSWNMMVSALSQSGRVREALDM-------------------VVD 260
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG-ELAAKKMRELDPQNSA 508
+ S+ +L D+ + S L AC ++ G +L A+ +R L +
Sbjct: 261 MQSKGVRL--------------DSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 306
Query: 509 VYVMLSNLYAAAGMWRDVTRV 529
V L LYA +G +++ V
Sbjct: 307 VASALVELYAKSGCFKEAKGV 327
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 142/323 (43%), Gaps = 59/323 (18%)
Query: 23 ILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVI 82
++S C N S+ + R + + + + I+A S+ G ++ AR+ FD M+ K+VI
Sbjct: 412 LISMYAKCDNL--QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVI 469
Query: 83 TWNAIITGYWQNGFLQESKNLFQSMPVK-----NIVSWNCMIAGCID------------- 124
TWNA++ Y Q+G ++ +++ M + + V++ + GC D
Sbjct: 470 TWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR 529
Query: 125 ----------------------NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
RI +A F + ++ ++NAMI+G+ +HG ++A
Sbjct: 530 TVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQA 589
Query: 163 TRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS-----WTVMIT 213
+F+ + +R + ISY A+L G G V + + D M + +S ++ M+
Sbjct: 590 IEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVD 649
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV-GMLENARL----LFERIQPKD 268
+ EA++L MP K V + CK+ G E A L +FE P D
Sbjct: 650 LLGRAGHLTEAKDLIDDMP--MKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSP-D 706
Query: 269 CVSFNAMIAGYAQNGVAEEALRL 291
S+ M YA G ++++ ++
Sbjct: 707 SGSYMLMAKIYADAGKSDDSAQI 729
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/557 (31%), Positives = 299/557 (53%), Gaps = 27/557 (4%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T F+ N ++ S+ G++ A +LFD M +++++W A+I+G QN E+ F
Sbjct: 37 TPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCG 96
Query: 107 MPVKNIV----SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL-----KHG 157
M + V +++ I C I+ + + + L K G
Sbjct: 97 MRICGEVPTQFAFSSAIRACASLGSIEMG-KQMHCLALKFGIGSELFVGSNLEDMYSKCG 155
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI----- 212
+ +A ++FE+MP ++ +S+TAM+DG+ K GE ++A ++FK ++ V I
Sbjct: 156 AMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEA-----LLAFKKMIDEEVTIDQHVL 210
Query: 213 ------TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE-RIQ 265
G +K +F + ++ ++FV A+ + K G +E+A +F +
Sbjct: 211 CSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSE 270
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
++ VS+ +I GY + E+ L +F + + ++P++ T S+ AC+ L +G Q
Sbjct: 271 CRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQ 330
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H V++ F+ + V + ++ MY +CG + + AF +I P ++WN++++ F QHG
Sbjct: 331 LHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGL 390
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+ A+ FF +M G P+ ITF+SLL+ C HAG V E +D F M K YG++P EHY+
Sbjct: 391 GKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYS 450
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C++D+L RAG+L++A + MPFE + W S L AC I+ + E+G+LAA+K+ +L+P+
Sbjct: 451 CVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPK 510
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
NS V+LSN+YA W DV VR+ M++ V K YSW+++G K H F D SH
Sbjct: 511 NSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXR 570
Query: 566 IDKIHLELKRASVQMKS 582
I+ +L Q+K+
Sbjct: 571 KSAIYEKLDXLLDQIKA 587
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 8/264 (3%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
M D L V + + L G+Q H L+I G+ + N ++ MYS+CG + +
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + NLVSW +I+ +Q+ + +A+ F M + G P F S + AC G
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ + L +K +GI + L D+ S+ G + A ++ + MP + D W ++
Sbjct: 121 SIEMGKQMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAM 178
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
+ E LA KKM +D + + +L + A G + R + V
Sbjct: 179 IDGYSKIGEFEEALLAFKKM--IDEEVTIDQHVLCSTLGACGALKACKFGRSV--HSSVV 234
Query: 540 KQCAYSWIEIGNKVH--YFLGGDM 561
K S I +GN + Y GDM
Sbjct: 235 KLGFESDIFVGNALTDMYSKAGDM 258
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 128/306 (41%), Gaps = 64/306 (20%)
Query: 23 ILSTPDSCGNF-------TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFD- 74
+ ST +CG + HSS +++L +FV NA S+AG + +A +F
Sbjct: 210 LCSTLGACGALKACKFGRSVHSS--VVKLGFESDIFVGNALTDMYSKAGDMESASNVFGI 267
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGC-------- 122
++V+++ +I GY + +++ ++F + + I +++ +I C
Sbjct: 268 DSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQ 327
Query: 123 ------------IDNDR---------------IDDAFDYFQAMPERNTATYNAMISGFLK 155
D D ++ A F + + +N+++S F +
Sbjct: 328 GTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQ 387
Query: 156 HGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARAL-----SDYMSFKNVV 206
HG ++A + FE+M R N I++ ++L G G V++ Y
Sbjct: 388 HGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEE 447
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV-GMLENARLLFE--- 262
++ +I + R EA+E RMP ++ N F + + G C++ G E +L E
Sbjct: 448 HYSCVIDLLGRAGRLKEAKEFINRMP-FEPNAFGWCSFL-GACRIHGDKEMGKLAAEKLV 505
Query: 263 RIQPKD 268
+++PK+
Sbjct: 506 KLEPKN 511
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/557 (30%), Positives = 296/557 (53%), Gaps = 32/557 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ +NN I + ++ A +FD+M ++V++W A++ GY Q G + S L M
Sbjct: 39 LIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGY 98
Query: 110 KNIVSWN---------CMIAGCIDNDR------IDDAFDYFQAMPERNTATYNAMISGFL 154
+ C G ++N + F++ + NA I +
Sbjct: 99 SGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVG-------NATIDMYS 151
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT- 213
K GR+ A ++F +MP RN++S+ AM+ G +G K+ L M + V T
Sbjct: 152 KCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTS 211
Query: 214 --------GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
G ++ A + P +N+ + +A++ + K G L A+ +F+RI+
Sbjct: 212 TLKACGALGAIRGGTQIHASLITRGFPISIRNI-IASAIVDLYAKCGYLFEAQKVFDRIE 270
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
K+ +S++A+I G+AQ G EA+ LF + + D L + + L L+ +G+Q
Sbjct: 271 QKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQ 330
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H +++ ++SV N++I MY +CG ++E F ++ N+VSW +I + +HG
Sbjct: 331 MHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGL 390
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
EKA+ F++M L+G + D + +L+LLSAC H+G + ES + F + + + P+ EHY
Sbjct: 391 GEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYA 450
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C+VDIL RAGQL++A + + M + + G+W +LL+AC ++ N+E+G + + +D
Sbjct: 451 CMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTD 510
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
N YVM+SN+YA AG W++ RVR L+K +G+ K+ SW+EI ++H+F GGD +HP
Sbjct: 511 NPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPL 570
Query: 566 IDKIHLELKRASVQMKS 582
+KIH LK ++K
Sbjct: 571 TEKIHEMLKEMERRVKE 587
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 148/333 (44%), Gaps = 46/333 (13%)
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM- 231
++I ++D + K VD A ++ D M +NVVSWT ++ GY++ + L M
Sbjct: 38 DLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMG 97
Query: 232 -PDYDKNVFVVTAMITGFCKVGMLEN---------------------------------- 256
N F + + +G++EN
Sbjct: 98 YSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIG 157
Query: 257 -ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A +F ++ ++ VS+NAMIAG+ G ++L LF M PD+ T S AC
Sbjct: 158 MAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACG 217
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVS--VCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
AL + G Q H +I GF ++ + +A++ +Y++CG + +++ F +I NL+SW
Sbjct: 218 ALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISW 277
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+ +I FAQ G+ +A+ F Q+ + + DG ++ V + + ++K
Sbjct: 278 SALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILK 337
Query: 434 VYGIIPSSEHYTC---LVDILSRAGQLEKAWQI 463
V PS + ++D+ + G E+A ++
Sbjct: 338 V----PSGLDISVANSIIDMYLKCGLTEEAERL 366
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
L + CS L ++G Q H + GF ++ + N +I MY +C + + F ++
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
N+VSW ++ + Q G+ + +L +MG +G P+ TF + L ACG G V M
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + VK G S +D+ S+ G++ A Q+ MPF + W +++A
Sbjct: 127 IHGMCVK-SGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFR-NLVSWNAMIAG 180
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 306/568 (53%), Gaps = 41/568 (7%)
Query: 46 STQYV--FVNNAKISAL-SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
STQ+ FV N +I + S G S +R +FD++ K++ WNAI++ Y +N +++ +
Sbjct: 134 STQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMS 193
Query: 103 LFQSM-----PVKNIVSWNCMIAGCID-------------NDRIDDAFDYFQAMPERNTA 144
+F + + + C+I C ++D D F
Sbjct: 194 IFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVG------- 246
Query: 145 TYNAMISGFLKHGRLEEAT-RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
NA+I+ + K G +EEA R+F+ M + V S+ A+L G+ + D +AL Y+
Sbjct: 247 --NALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNS--DPRKALDLYLQMT 302
Query: 204 N--------VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
+ + ++ +K+ + E F + F+ ++++ + G
Sbjct: 303 DSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPF 362
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A++LF+ ++ + VS+N MIAGY+QNG+ +EA+ LF M+ +QP + ++ V ACS
Sbjct: 363 AAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACS 422
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L L G++ H ++ ++ V +++I MY++ G I S+ F ++ ++ SWN
Sbjct: 423 QLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNV 482
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
IIA + HG ++AL F +M G PD TF +L AC HAG V + ++ F M+ ++
Sbjct: 483 IIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLH 542
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
I P EHYTC+VD+L RAG+++ A ++ + MP + D+ +W SLL++C I+ N+ LGE
Sbjct: 543 NIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKV 602
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
A K+ EL+P+ YV++SNL+A +G W DV RVR MK+ G+ K SWIE+G KVH
Sbjct: 603 ANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHN 662
Query: 556 FLGGDMSHPCIDKIHLELKRASVQMKSV 583
FL GD P ++++ +R V++ S+
Sbjct: 663 FLIGDEMLPELEEVRETWRRLEVKISSI 690
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENAR----LLFERIQPKDCVSFNAMIAGYAQN 282
+FYR+ KN + + ++ T + + R L F S I ++
Sbjct: 21 VFYRITRKSKNKYSLHSIFTPIASLSLSAQTRQTKSLSFANSSTNRQFSSLHEIKKLCES 80
Query: 283 GVAEEALRLF---SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
G +EAL S + +D + + AC + + GR+ H +V + N
Sbjct: 81 GNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCND 140
Query: 340 SVCNA-VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-G 397
V N +ITMYS CG DS + F ++ NL WN I++A+ ++ +E A+ FS++
Sbjct: 141 FVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELIS 200
Query: 398 LNGFDPDGITFLSLLSAC 415
+ PD T ++ AC
Sbjct: 201 VTEHKPDNFTLPCVIKAC 218
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 297/555 (53%), Gaps = 35/555 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFD--QMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
VFV + ++ +S A LF + K+ + W A++TGY QNG ++ F+ M
Sbjct: 197 VFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYM 256
Query: 108 PVKNI-----------VSWNCMIAGCIDNDR----IDDAFDYFQAMPERNTATYNAMISG 152
+ + + + ++A C + F N +A++
Sbjct: 257 HAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFG-------SNVYVQSALVDM 309
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSW 208
+ K G L+ A + E M +V+S+ +++ GF++ G ++A L M +N+ ++
Sbjct: 310 YAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTF 369
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
++ V ++ ++ V A++ + K G ++ A +FE++ KD
Sbjct: 370 PSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKD 429
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
+S+ +++ GYAQN EE+L++F M + PD + S+ +AC+ L LL G+Q H+
Sbjct: 430 VISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHL 489
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
I++G + SV N+++ MY++CG + D++ F + ++++W II +AQ+G
Sbjct: 490 DFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRN 549
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
+L F+ M +G PD ITF+ LL AC HAG V+E F+ M KVYGI P EHY C++
Sbjct: 550 SLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMI 609
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
D+ R+G+L++A Q+ M + D VW SLL+AC ++ N+EL E AA + EL+P N+
Sbjct: 610 DLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAM 669
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP---- 564
YVMLSN+Y+A+ W DV ++R LMK +G+ K+ SW+EI ++V+ F+ D HP
Sbjct: 670 PYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAE 729
Query: 565 ---CIDKIHLELKRA 576
ID+I L +K A
Sbjct: 730 IYTKIDEIILRIKEA 744
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 235/496 (47%), Gaps = 75/496 (15%)
Query: 46 STQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQ 105
S + ++ N ++ LS++G+++ AR+LFD+M KD +WN +I+ Y G L E++ LF
Sbjct: 61 SYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFD 120
Query: 106 SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------------ERNTATYNAMIS 151
K+ ++W+ +I+G +AFD F++M R ++ + +
Sbjct: 121 GCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQT 180
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF--KNVVSWT 209
G + HG + FE NV T ++D + K V +A L + F KN V WT
Sbjct: 181 GEMIHGFV--VKNGFEG----NVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWT 234
Query: 210 VMITGYVKNERFCEARELF------------YRMP------------------------- 232
M+TGY +N +A E F Y P
Sbjct: 235 AMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS 294
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+ NV+V +A++ + K G L+NA+ + E ++ D VS+N+++ G+ ++G+ EEALRLF
Sbjct: 295 GFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLF 354
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M +M+ DD T SV C + + H L+I+ GFE V NA++ MY++
Sbjct: 355 KNMHGRNMKIDDYTFPSVLNCCVVGSI--NPKSVHGLIIKTGFENYKLVSNALVDMYAKT 412
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + + F ++ +++SW +++ +AQ+ +E++L F M + G +PD S+L
Sbjct: 413 GDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASIL 472
Query: 413 SACGHAGKVNESMDLFELMVKVY------GIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
SAC + L E +V+ G+ S Y LV + ++ G L+ A I
Sbjct: 473 SACA-------ELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVS 525
Query: 467 MPFEADTGVWGSLLAA 482
M + D W +++
Sbjct: 526 MQVK-DVITWTAIIVG 540
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 143/286 (50%), Gaps = 6/286 (2%)
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
S++++ ++ K+ + +AR+LF +MP D+ + MI+ + VG L AR L
Sbjct: 61 SYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDE--YSWNTMISSYVNVGRLVEAREL 118
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ K ++++++I+GY + G EA LF M + TL SV CS+L L+
Sbjct: 119 FDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLI 178
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR--QIHSPNLVSWNTIIA 378
G H V++NGFE NV V ++ MY++C + ++E F+ + N V W ++
Sbjct: 179 QTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVT 238
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+AQ+G KA+ FF M G + + TF ++L+AC + +VK G
Sbjct: 239 GYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS-GFG 297
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+ + LVD+ ++ G L+ A + + M + D W SL+ V
Sbjct: 298 SNVYVQSALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLMVGFV 342
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 140/313 (44%), Gaps = 52/313 (16%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLI-RLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FP +L G+ P S + LI + Y V+NA + ++ G + A +F++
Sbjct: 369 FPSVLNCCVV----GSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEK 424
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA----GCIDNDRIDDA 131
M KDVI+W +++TGY QN +ES +F M V + ++A C + ++
Sbjct: 425 MLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFG 484
Query: 132 ----FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
D+ ++ + + YN++++ + K G L++A +F M ++VI++TA++ G+ +
Sbjct: 485 KQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQN 544
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
G+ + D M V S T PD+ ++
Sbjct: 545 GKGRNSLKFYDAM----VSSGT---------------------RPDF----ITFIGLLFA 575
Query: 248 FCKVGMLENARLLFER------IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
G+++ R F++ I+P + MI + ++G +EA +L +MD++
Sbjct: 576 CSHAGLVDEGRKYFQQMNKVYGIKPGP-EHYACMIDLFGRSGKLDEAKQLLD---QMDVK 631
Query: 302 PDDATLVSVFTAC 314
PD S+ +AC
Sbjct: 632 PDATVWKSLLSAC 644
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 288/518 (55%), Gaps = 17/518 (3%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV-----KNIVSWNCMIAGCI 123
AR+LFD+M KDVI W+ +I GY Q Q +F+ M + + V ++ C
Sbjct: 202 ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACA 261
Query: 124 DNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
+ + + R + N++I + K A ++F ++ +RN +S+ +
Sbjct: 262 SSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNS 321
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTV------MITGYVKNERFCEARELFYRMPD 233
ML GF+ +A++L M + V + V I Y + C++
Sbjct: 322 MLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRG 381
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ N V++A+I + K ++E A +F R++ +D VS++ MI+G+A G +EA+ ++
Sbjct: 382 SEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQ 441
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + ++P+ T++++ ACS L + +H + IR GF + V+V AV+ MYS+CG
Sbjct: 442 EMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCG 501
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
IL S AF Q+ N+V+W+ +IAA+ +G +AL F++M +G P+ +T LS+L+
Sbjct: 502 EILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLA 561
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H G V E + LF+ MV+ G+ P EHY+C+VD+L RAG+L+ A ++ + MP
Sbjct: 562 ACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPHNLKN 621
Query: 474 G--VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
G +WGSLL+AC ELG+ A ++ EL+P NSA Y++ S++YAA G+W D R+R+
Sbjct: 622 GASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRV 681
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
L KE+GV YS + I NK F+ GD SHP D+I
Sbjct: 682 LAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPRSDEI 719
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 226/491 (46%), Gaps = 29/491 (5%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
+FPPIL+ S + H+ CLI+ + + N+ + R G A +F+
Sbjct: 50 VFPPILKAWSFLSHRHGKSLHA--CLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNS 107
Query: 76 MT-TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN---------IVSWNCMIAGCIDN 125
M ++D ++WN +I G+ NG L F + V +V C I G +
Sbjct: 108 MRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHD 167
Query: 126 DRIDDAF---DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
I + F A+ ++ N+++S ++ +E A LF++M ++VI+++ M+
Sbjct: 168 GLILHGYLIKSGFWAI----SSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIG 222
Query: 183 GFMKKGEVDKARALSDYMSF-----KNVVSWTVMITGYVKNERFCEAREL--FYRMPDYD 235
G+++ E + M + V ++ + C R + +D
Sbjct: 223 GYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFD 282
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
++FV ++I + K +A +F I ++ VS+N+M++G+ N EA L S M
Sbjct: 283 CDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSM 342
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
K ++ D+ TLV++ C + H ++IR G EAN V +A+I Y++C I
Sbjct: 343 RKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLI 402
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F ++ ++VSW+T+I+ FA G ++A+ + +M + P+ IT ++LL AC
Sbjct: 403 EIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEAC 462
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
++ S + ++ G T +VD+ S+ G++ + + + + +
Sbjct: 463 SVTAELKRSKWAHGVAIR-QGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALK-NIVT 520
Query: 476 WGSLLAACVIN 486
W +++AA +N
Sbjct: 521 WSAMIAAYGMN 531
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 178/371 (47%), Gaps = 48/371 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV N+ I S+ +A ++F++++ ++ ++WN++++G+ N E+++L SM
Sbjct: 285 LFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRK 344
Query: 110 KNIVS------------------WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
+ + + ++C C+ R +A N +A+I
Sbjct: 345 ERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEA----------NELVLSALID 394
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ K +E A +F +M RR+V+S++ M+ GF G+ D+A A+ M +++V V+
Sbjct: 395 AYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMD-RDLVKPNVI 453
Query: 212 ----------ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
+T +K ++ + + V V TA++ + K G + +R F
Sbjct: 454 TIINLLEACSVTAELKRSKWAHGVAI---RQGFASEVTVGTAVVDMYSKCGEILASRRAF 510
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+++ K+ V+++AMIA Y NG+A EAL LF+ M + ++P+ T +SV ACS L+
Sbjct: 511 DQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVE 570
Query: 322 EGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS----WNTI 376
EG +++ G E + ++ M R G LD+ + + NL + W ++
Sbjct: 571 EGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGK-LDTAIEVIKAMPHNLKNGASIWGSL 629
Query: 377 IAAFAQHGHYE 387
++A +G E
Sbjct: 630 LSACRSYGLTE 640
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 114/238 (47%), Gaps = 4/238 (1%)
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ +D VS+N +I G+ NG L F+ +P+ +T+V V AC L ++G
Sbjct: 110 RSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGL 169
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H +I++GF A SV N++++MY EL F ++H ++++W+ +I + Q
Sbjct: 170 ILHGYLIKSGFWAISSVQNSLLSMYVDADMECAREL-FDEMHEKDVIAWSVMIGGYLQWE 228
Query: 385 HYEKALIFFSQMGL-NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
+ L F +M L G +PDG+ +S+L AC + V + L++ G
Sbjct: 229 EPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIH-RGFDCDLFV 287
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
L+D+ S+ A+++ + + + W S+L+ V+N N + MR+
Sbjct: 288 ENSLIDMYSKCKDAGSAFKVFNEIS-QRNNVSWNSMLSGFVLNENYSEAQSLISSMRK 344
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 8 HQTYLKRILFPPILRILSTPDSCG-----NFTPHSSNCLIRLFSTQYVFVNNAKISALSR 62
+Q + ++ P ++ I++ ++C + + IR V V A + S+
Sbjct: 440 YQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSK 499
Query: 63 AGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCM 118
G+I A+R+ FDQ+ K+++TW+A+I Y NG E+ LF M N V+ +
Sbjct: 500 CGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSV 559
Query: 119 IAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
+A C +++ F++M E Y+ M+ + G+L+ A + + MP
Sbjct: 560 LAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPH 617
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 132/302 (43%), Gaps = 32/302 (10%)
Query: 33 FTPHSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
F S +C +IR S V +A I A ++ I A ++F +M +DV++W+ +I+G+
Sbjct: 368 FHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGF 427
Query: 92 WQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
G E+ ++Q M +++V N + I + + E + + ++
Sbjct: 428 AHCGKPDEAIAVYQEMD-RDLVKPNVIT--------IINLLEACSVTAELKRSKWAHGVA 478
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
++ G E T TA++D + K GE+ +R D ++ KN+V+W+ M
Sbjct: 479 --IRQGFASEVT------------VGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAM 524
Query: 212 ITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
I Y N EA LF M + N +++ G++E LF+ + +
Sbjct: 525 IAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELG 584
Query: 270 VS-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ ++ M+ + G + A+ + M +++ + S+ +AC + L G+
Sbjct: 585 LEPGFEHYSCMVDMLGRAGKLDTAIEVIKAM-PHNLKNGASIWGSLLSACRSYGLTELGK 643
Query: 325 QS 326
++
Sbjct: 644 EA 645
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 5/254 (1%)
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
+ NG +E + + + K +Q D ++ + G+ H +I+ GF++
Sbjct: 23 SANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDSFT 82
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
S+ N+++ Y RCG + F + S + VSWN +I +G L +F+ +
Sbjct: 83 SIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARV 142
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
GF+P+ T + ++ AC G ++ + L ++K G S L+ + A +E
Sbjct: 143 AGFEPNISTMVLVIQACRILGTKHDGLILHGYLIK-SGFWAISSVQNSLLSMYVDA-DME 200
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
A ++ M E D W ++ + ++G +KM + VM+S L A
Sbjct: 201 CARELFDEM-HEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKA 259
Query: 519 AAGMWRDVTRVRLL 532
A RDV RL+
Sbjct: 260 CASS-RDVCTGRLV 272
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 301/546 (55%), Gaps = 16/546 (2%)
Query: 53 NNAK-ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
+NAK I + +R G I +ARQ+FD+ V WNA+I Y + G + E+ +L+ M +
Sbjct: 41 SNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEG 100
Query: 112 I----VSWNCMIAGCIDN-DRIDDAFDYFQAMPE---RNTATYNAMISGFLKHGRLEEAT 163
+ ++ ++ C + D + QA+ + + A+++ + K G+++EA
Sbjct: 101 VRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAM 160
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK------ 217
R+F++M RR+++ +T M+ G + G+ +A + M K V V++ G ++
Sbjct: 161 RVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLG 220
Query: 218 NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ + + + D +V V T+++ + K G LE A +F R+ K+ +S++A+I+
Sbjct: 221 HSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALIS 280
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
G+AQNG A AL+L M +PD +LVSV ACS + L G+ H ++R
Sbjct: 281 GFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHF 339
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ AVI MYS+CG + + F QI + +SWN IIA++ HG E+AL F QM
Sbjct: 340 DCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMR 399
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
PD TF SLLSA H+G V + F +MV Y I PS +HY C+VD+LSRAG++
Sbjct: 400 ETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRV 459
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
E+A ++ + M E +W +LL+ C+ + +GE+AAKK+ EL+P + +Y ++SN +
Sbjct: 460 EEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFF 519
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
A A W +V VR +MK+ G+ K YS +E+ K+H FL D SH ++I L +
Sbjct: 520 ATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLD 579
Query: 578 VQMKSV 583
+MK++
Sbjct: 580 YEMKAM 585
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 178/356 (50%), Gaps = 23/356 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A ++ ++ GK+ A ++FD+M +D++ W +ITG QNG +E+ ++++ M
Sbjct: 140 VFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHK 199
Query: 110 KNIVSWNCMIAGCID------NDRIDDAFDYFQAMPE--RNTATYNAMISGFLKHGRLEE 161
K + ++ G I + ++ + + + + +++ + K+G LE
Sbjct: 200 KRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLEL 259
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL-SDYMSF----KNVVSWTVMI---- 212
A+ +F +M +NVIS++A++ GF + G A L D SF +V +V++
Sbjct: 260 ASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQ 319
Query: 213 TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
G++K + Y + + TA+I + K G L AR +F++I +D +S+
Sbjct: 320 VGFLKLGKSVHG----YIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISW 375
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVLVI 331
NA+IA Y +G EEAL LF M + +++PD AT S+ +A S L+ +GR ++V
Sbjct: 376 NAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVN 435
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
+ + ++ + SR G + ++ EL I P + W +++ HG +
Sbjct: 436 EYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKF 491
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 44/234 (18%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H L+I G + + +I Y+R G I + F + + +WN +I A+++ G
Sbjct: 27 HALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAM 86
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHA---------------------------- 418
+AL + +M G PD T+ +L AC +
Sbjct: 87 FEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAV 146
Query: 419 -------GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP--- 468
GK++E+M +F+ M + + +T ++ L++ GQ +A I + M
Sbjct: 147 LNLYAKCGKMDEAMRVFDKMGRRDLVC-----WTTMITGLAQNGQAREAVDIYRQMHKKR 201
Query: 469 FEADTGVWGSLLAACVINLNVELG-ELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
E D V L+ AC + ++G + +R+ + V L ++YA G
Sbjct: 202 VEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNG 255
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 291/537 (54%), Gaps = 39/537 (7%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNI 112
+ A S G+ S AR +FD+ K+V+ +N +I Y N E+ ++FQ M +
Sbjct: 78 MRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDH 137
Query: 113 VSWNCMIAGC--IDNDR----IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
++ C++ C +DN R + DA + + N NA+++ + K G L EA ++
Sbjct: 138 YTFPCVLKACSGLDNLRVGLQVHDAI--VKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+QMP R+V+S+ +M+ G+ + G+ D A + M N+
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNL--------------------- 234
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
++D + + + + ++ +FER+ K+ +S+N MIA Y N +
Sbjct: 235 ------NHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPN 288
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
EA+ LF M + M+PD T+ S+ AC L L GR+ H + + N+ + NA++
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALL 348
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MY++CG + ++ F ++ ++VSW ++++A+ + G A+ F++M +G +PD I
Sbjct: 349 DMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSI 408
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
F+S+LSAC H G +++ F +M + YGI+P EH+ C+VD+ RAG++E+A+ +
Sbjct: 409 AFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQ 468
Query: 467 MPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
MP E + VWG+LL+AC ++ +++G +AA + +L P+ S YV+LSN+YA AGMW+DV
Sbjct: 469 MPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDV 528
Query: 527 TRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
VR MK+ G+ K S +E+ +VH FL GD HP I+ EL +MK +
Sbjct: 529 MNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKEL 585
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 159/350 (45%), Gaps = 56/350 (16%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQM 76
FP +L+ S D+ + ++++ +F+ NA ++ + G + AR++ DQM
Sbjct: 140 FPCVLKACSGLDNL-RVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQM 198
Query: 77 TTKDVITWNAIITGYWQNGFLQES------------------------------------ 100
+DV++WN+++ GY Q+G ++
Sbjct: 199 PYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQY 258
Query: 101 -KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH-GR 158
N+F+ M KN++SWN MIA ++N ++A F M E I+ L G
Sbjct: 259 IHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGD 318
Query: 159 LEE---ATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
L RL + + R N++ A+LD + K G +++AR + D M ++VVSWT M
Sbjct: 319 LSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSM 378
Query: 212 ITGYVKNERFCEARELFYRMPDYDKN--VFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
++ Y ++ + +A LF +M D +N ++++ G+L+ R F + +
Sbjct: 379 MSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYG 438
Query: 270 V-----SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ F M+ + + G EEA +S + +M M+P++ ++ +AC
Sbjct: 439 IVPRIEHFACMVDLFGRAGEVEEA---YSFIKQMPMEPNERVWGALLSAC 485
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
+VI + ++ ++ YS G + F + N+V +N +I ++ + Y +
Sbjct: 61 IVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVE 120
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL F M F+PD TF +L AC + + + + +VKV G+ + LV
Sbjct: 121 ALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKV-GLDTNLFIGNALV 179
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + G L +A ++ MP+ D W S++A
Sbjct: 180 AMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAG 212
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 301/579 (51%), Gaps = 56/579 (9%)
Query: 58 SALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN- 116
S L + +R LF Q+ ++ WN +I GY ++ +E+ L+ SM K I N
Sbjct: 52 SLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNN 111
Query: 117 ----CMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
++ C ++ + + E + NA+I + G L A LF++
Sbjct: 112 FTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDE 171
Query: 169 MPRRNVISYTAMLDGFMKK----------GEVDKARALSDYMSF---------------- 202
R+++SY M+ G+ + GE+ + L D +F
Sbjct: 172 SLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVG 231
Query: 203 ---------------KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
N++ + ++ Y K A +F M K+ ++M+ G
Sbjct: 232 KQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGT-SKSAAAWSSMVCG 290
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ + G + AR LF + +D +S+ AMI+GY+Q G EAL LF M + ++PD+ TL
Sbjct: 291 YARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTL 350
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
V+V +AC+ L + G++ + I NG F N + AV+ MY++CG I + FR++
Sbjct: 351 VAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV- 409
Query: 367 SPNLVS---WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
N+ + +N++IA AQHG E A+ F ++ G PD +TF+ +L ACGH+G + E
Sbjct: 410 GKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEE 469
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
LFE M YGI P EHY C+VD+L R G LE+A+ + Q MPFEA++ +W +LL+AC
Sbjct: 470 GKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSAC 529
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
+ NV++GE+A +K+ E++ Q+ A YV+LSN+ A A W + +VR +M++ G+ K
Sbjct: 530 RTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPG 589
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
+S+IE+G +H F+ D SHP +I L LK ++++KS
Sbjct: 590 WSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKS 628
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 211/474 (44%), Gaps = 96/474 (20%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV NA I S G ++ AR LFD+ +D++++N +I GY + + + LF M
Sbjct: 146 LFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQN 205
Query: 110 KNIV----SWNCMIAGC-------IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
I+ ++ + + C + + +++ + N +A++ + K G
Sbjct: 206 SGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSI-DSNILLKSAIVDMYAKCGL 264
Query: 159 LEEATRLFEQM-PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
+ A R+F M ++ ++++M+ G+ + GE++ AR L ++M ++V+SWT MI+GY +
Sbjct: 265 INIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQ 324
Query: 218 NERFCEARELFYRM------PD--------------------------------YDKNVF 239
+ EA ELF M PD +++N
Sbjct: 325 AGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTI 384
Query: 240 VVTAMITGFCKVGMLENARLLFERIQP--KDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ A++ + K G +++A +F R+ K FN+MIAG AQ+G+ E A+ +F +I
Sbjct: 385 LTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIS 444
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
++PD+ T V V AC L+ EG++ FE S+ NA GI
Sbjct: 445 TGLKPDEVTFVGVLCACGHSGLIEEGKKL--------FE---SMFNAY--------GI-- 483
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
P + + ++ ++G E+A +M F+ + + + +LLSAC
Sbjct: 484 ---------KPQMEHYGCMVDLLGRYGCLEEAYDLVQKM---PFEANSVIWRALLSACRT 531
Query: 418 AGKVN----ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
G V L E+ + Y L +IL+ A Q E+A Q+ + M
Sbjct: 532 HGNVKIGEIAGQKLLEMEAQ------HGARYVLLSNILADANQWEEARQVRKVM 579
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 131/253 (51%), Gaps = 11/253 (4%)
Query: 238 VFVVTAMITGFCKVGM---LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+F ++ +I+ F +G L+++RLLF +I + +N MI GY+++ EA+ L+
Sbjct: 41 IFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMS 100
Query: 295 MIKMDMQP-DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
MI + P ++ T + +C+ L L G + H +I++GFE+++ V NA+I +YS G
Sbjct: 101 MIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFG 160
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ + F + +LVS+NT+I +A+ E AL F +M +G PD TF++L S
Sbjct: 161 NLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFS 220
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEH----YTCLVDILSRAGQLEKAWQITQGMPF 469
C +NE ++ +VY + S + + +VD+ ++ G + A ++ M
Sbjct: 221 VC---SVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGT 277
Query: 470 EADTGVWGSLLAA 482
W S++
Sbjct: 278 SKSAAAWSSMVCG 290
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG---GILDSE 359
++ + + + +C + + +G Q H I NG + + +I+ +S G G+ S
Sbjct: 8 ENPSSLCLLESCKSFK---QGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSR 64
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF-DPDGITFLSLLSACGHA 418
L F QI PNL WNT+I +++ + +A++ + M G P+ TF LL++C
Sbjct: 65 LLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARL 124
Query: 419 GKVNESMDLFELMVK 433
+ ++ ++K
Sbjct: 125 SSLEPGHEVHSHIIK 139
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 267/478 (55%), Gaps = 42/478 (8%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
Y+A I+ ++ L E ++ M R V T ++ +++ G +D AR + D M
Sbjct: 44 YDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMP 103
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------------------------------ 231
+NVVSWT MI+GY ++ R EA ELF RM
Sbjct: 104 ERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQ 163
Query: 232 -------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+++ ++FV ++++ + K G ++ AR +F+ + +D VS A+I+GYAQ G+
Sbjct: 164 VHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGL 223
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
+EAL LF + MQ + T ++ T+ S L LN G+Q H L++R + + N+
Sbjct: 224 DDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNS 283
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+I MYS+CG +L S F + + +SWN ++ + +HG ++ + F M PD
Sbjct: 284 LIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTM-TEEVKPD 342
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+T L++LS C H G V+E +D+F+L+VK + HY C++D+L R+GQL+KA +
Sbjct: 343 SVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLI 402
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
+ MPFE +WGSLL AC +++NV +GE+ A+K+ +++P N+ YV+LSN+YAAAGMW+
Sbjct: 403 EHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWK 462
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
DV RVR LM E VTK+ A SWI + +H F + HP I+ ++K V +K+
Sbjct: 463 DVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKA 520
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 201/422 (47%), Gaps = 54/422 (12%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNC 117
R G + AR + D M ++V++W A+I+GY Q+G E+ LF M N +
Sbjct: 88 RCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLAT 147
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLEEATRLFEQMPRRN 173
++ C + I + + N ++ ++++ + K G ++EA ++F+ +P R+
Sbjct: 148 VLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERD 207
Query: 174 VISYTAMLDGFMKKGEVDKA----RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
+S TA++ G+ + G D+A R L N V++T ++T +++
Sbjct: 208 TVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHG 267
Query: 230 RMPDYDKNVFVV--TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
+ + F+V ++I + K G L +R +F+ + + +S+NAM+ GY ++G+ +E
Sbjct: 268 LILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQE 327
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
++LF M + +++PD TL++V + CS L++EG L+++ NAVI
Sbjct: 328 VVQLFRTMTE-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQ--------NAVI- 377
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
++ + +I + G +KAL M F+P
Sbjct: 378 ---------------------HIGHYGCVIDLLGRSGQLQKALDLIEHM---PFEPTPAI 413
Query: 408 FLSLLSACGHAGKVNESMDLFELMV-KVYGIIP-SSEHYTCLVDILSRAGQLEKAWQITQ 465
+ SLL AC +V+ ++ + E++ K+ + P ++ +Y L +I + AG + +++ +
Sbjct: 414 WGSLLGAC----RVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRK 469
Query: 466 GM 467
M
Sbjct: 470 LM 471
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 15 ILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
+ F +L LS S N+ ++R ++ + N+ I S+ GK+ +R++FD
Sbjct: 244 VTFTTLLTSLSGLASL-NYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFD 302
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK---NIVSWNCMIAGCIDNDRIDDA 131
M + I+WNA++ GY ++G QE LF++M + + V+ +++GC +D+
Sbjct: 303 NMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEEVKPDSVTLLAVLSGCSHGGLVDEG 362
Query: 132 FDYFQAMPERNTAT-----YNAMISGFLKHGRLEEATRLFEQMP 170
D F + + A Y +I + G+L++A L E MP
Sbjct: 363 LDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMP 406
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
++FV ++ + ++G I AR++FD + +D ++ AII+GY Q G E+ +LF+ +
Sbjct: 176 HMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLY 235
Query: 109 VK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLE 160
N V++ ++ ++ + + + N++I + K G+L
Sbjct: 236 SSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLL 295
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ R+F+ MP+R+ IS+ AML G+ + G
Sbjct: 296 YSRRVFDNMPQRSAISWNAMLMGYGRHG 323
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 231/352 (65%), Gaps = 1/352 (0%)
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+Y+++ V TA++ + K+G +E A +F I KD V+++AM+AGYAQ G E A+++F
Sbjct: 27 NYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 86
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQL-LNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+ K ++P++ T S+ C+A + +G+Q H I++ ++++ V +A++TMY++
Sbjct: 87 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 146
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G I +E F++ +LVSWN++I+ +AQHG KAL F +M DG+TF+ +
Sbjct: 147 KGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGV 206
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+AC HAG V E F++MV+ I P+ EH +C+VD+ SRAGQLEKA ++ + MP A
Sbjct: 207 FAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPA 266
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
+ +W ++LAAC ++ ELG LAA+K+ + P++SA YV+LSN+YA +G W++ +VR
Sbjct: 267 GSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRK 326
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
LM E+ V K+ YSWIE+ NK + FL GD SHP D+I+++L+ S ++K +
Sbjct: 327 LMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 378
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 140/260 (53%), Gaps = 15/260 (5%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
ER++ A++ ++K G++EEA ++F + +++++++AML G+ + GE + A +
Sbjct: 29 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 88
Query: 200 MSFKNVVS-----WTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVG 252
++ + +++ N + ++ F D ++ V +A++T + K G
Sbjct: 89 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKG 148
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+E+A +F+R + KD VS+N+MI+GYAQ+G A +AL +F M K ++ D T + VF
Sbjct: 149 NIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFA 208
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNA-VITMYSRCGGILDSELAFRQIHS-PNL 370
AC+ L+ EG + +++R+ A N+ ++ +YSR G + E A + I + PN
Sbjct: 209 ACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL---EKAMKVIENMPNP 265
Query: 371 VS---WNTIIAAFAQHGHYE 387
W TI+AA H E
Sbjct: 266 AGSTIWRTILAACRVHKKTE 285
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V++A ++ ++ G I +A ++F + KD+++WN++I+GY Q+G ++ ++F+ M +
Sbjct: 136 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 195
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNA-MISGFLKHGRLEEA 162
+ V++ + A C +++ YF M T +N+ M+ + + G+LE+A
Sbjct: 196 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 255
Query: 163 TRLFEQMP 170
++ E MP
Sbjct: 256 MKVIENMP 263
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 124/293 (42%), Gaps = 55/293 (18%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V A + A + GK+ A ++F + KD++ W+A++ GY Q G + + +F +
Sbjct: 34 VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 93
Query: 112 I----VSWNCMIAGCIDND------------------------------------RIDDA 131
I +++ ++ C + I+ A
Sbjct: 94 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA 153
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKK 187
+ F+ E++ ++N+MISG+ +HG+ +A +F++M +R V +++ +
Sbjct: 154 EEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA 213
Query: 188 GEVDKARALSDYMSFKNVVSWT-----VMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
G V++ D M ++ T M+ Y + + +A ++ MP+ + T
Sbjct: 214 GLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRT 273
Query: 243 AMITGFCKV-GMLENARLLFERI---QPKDCVSFNAMIAGYAQNGVAEEALRL 291
I C+V E RL E+I +P+D ++ + YA++G +E ++
Sbjct: 274 --ILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKV 324
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%)
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
+ H V++ +E + +V A++ Y + G + ++ F I ++V+W+ ++A +AQ G
Sbjct: 18 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 77
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
E A+ F ++ G P+ TF S+L+ C
Sbjct: 78 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 109
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 301/580 (51%), Gaps = 46/580 (7%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
YV + NA S S + Q+ Q DV A+I Y + G ++ + + F+ +
Sbjct: 109 YVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE 168
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATR 164
+++VSW MIA C+ +D+ A ++ M N T + + + L E
Sbjct: 169 HRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKF 228
Query: 165 LFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
++ + R +V + ++ F G + AR L + M ++VV+W ++IT YV+NE
Sbjct: 229 IYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNEN 288
Query: 221 FCEARELFYRMPD-------------------------------------YDKNVFVVTA 243
F EA LF R+ YD++V V TA
Sbjct: 289 FGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATA 348
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+++ + + A +F + KD +++ M YAQNG +EAL+LF M +P
Sbjct: 349 LMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPT 408
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
ATLV+V C+ L L +GRQ H +I NGF + V A+I MY +CG + ++ F
Sbjct: 409 SATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFE 468
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
++ +++ WN+++ A+AQHG+Y++ L F+QM L+G D ++F+S+LSA H+G V +
Sbjct: 469 KMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTD 528
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV-WGSLLAA 482
F M++ + I P+ E Y C+VD+L RAG++++A I + G+ W +LL A
Sbjct: 529 GYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGA 588
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
C + + + AA+++ E DP +S YV+LSN+YAAAG W V R+R LM+ +GV K+
Sbjct: 589 CRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEP 648
Query: 543 AYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
S IEI N+VH FL GD SHP I+ EL + +M++
Sbjct: 649 GRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRA 688
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 211/440 (47%), Gaps = 16/440 (3%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI---- 112
I ++ G + A+Q+F+ + KDV W +I Y Q G + +F M +++
Sbjct: 47 IQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTK 106
Query: 113 VSWNCMIAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V++ ++ C + + D + Q E + A+I+ + K G + A F++
Sbjct: 107 VTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKR 166
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI----TGYVKNERFCEA 224
+ R+V+S+TAM+ ++ + AR L M VV + + Y E
Sbjct: 167 LEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEG 226
Query: 225 RELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+ ++ + + +V V+ + + F G+L +AR LFE + +D V++N +I Y QN
Sbjct: 227 KFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQN 286
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
EA+RLF + + ++ +D T V + ++L L +G+ H LV G++ +V V
Sbjct: 287 ENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVA 346
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
A++++Y RC + F + S ++++W + A+AQ+G ++AL F +M L G
Sbjct: 347 TALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRR 406
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P T +++L C H + + + +++ G T L+++ + G++ +A
Sbjct: 407 PTSATLVAVLDTCAHLAALQKGRQIHSHIIE-NGFRMEMVVETALINMYGKCGKMAEARS 465
Query: 463 ITQGMPFEADTGVWGSLLAA 482
+ + M + D VW S+L A
Sbjct: 466 VFEKMA-KRDILVWNSMLGA 484
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 162/339 (47%), Gaps = 22/339 (6%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+++N V +I + + G + A+ +FE ++ KD ++ MI Y Q G + AL +F
Sbjct: 36 FEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFY 95
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + D+ P T V++ AC++ + L +G + H +++ GFE +V V A+I MY++CG
Sbjct: 96 QMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCG 155
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ + +F+++ ++VSW +IAA QH + A + +M L+G P+ IT ++ +
Sbjct: 156 SVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFN 215
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
A G ++E ++ L V + +++ AG L A ++ + M + D
Sbjct: 216 AYGDPHYLSEGKFIYSL-VSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDV 273
Query: 474 GVWGSLLAACVINLNV-ELGELAAKKMRELDPQNSAVYVMLSNLYAA------------- 519
W ++ V N N E L + ++ N +V++ N+Y +
Sbjct: 274 VTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHEL 333
Query: 520 ---AGMWRDVTRVRLLMKEQGVTKQCAYSW---IEIGNK 552
AG RDV LM G + +W +++G+K
Sbjct: 334 VKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSK 372
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 164/330 (49%), Gaps = 7/330 (2%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E+N +I + + G + EA ++FE + R++V ++T M+ + ++G+ D+A +
Sbjct: 37 EQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQ 96
Query: 200 MSFKNV----VSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGM 253
M ++V V++ ++ E + E+ ++ ++ +VFV TA+I + K G
Sbjct: 97 MQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGS 156
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ A F+R++ +D VS+ AMIA Q+ A L+ M + P+ TL +VF A
Sbjct: 157 VRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNA 216
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
L+EG+ + LV E++V V N+ + M+ G + D+ F + ++V+W
Sbjct: 217 YGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTW 276
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N +I + Q+ ++ +A+ F ++ +G + ITF+ +L+ + + + EL VK
Sbjct: 277 NIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHEL-VK 335
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
G T L+ + R +AW+I
Sbjct: 336 EAGYDRDVVVATALMSLYGRCEAPGQAWKI 365
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 110/217 (50%), Gaps = 6/217 (2%)
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+PD A V++ CS+ + ++ GR+ H V GFE N VC +I MY++CG + +++
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + ++ +W +I + Q G Y++AL F QM P +T++++L+AC
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + M++ +++ G T L+++ ++ G + AW + + D W +++
Sbjct: 122 LKDGMEIHGQILQ-QGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMI 179
Query: 481 AACVINLNVELGELAAKKMRELD---PQNSAVYVMLS 514
AACV + L ++M +LD P +Y + +
Sbjct: 180 AACVQHDQFALARWLYRRM-QLDGVVPNKITLYTVFN 215
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/561 (30%), Positives = 305/561 (54%), Gaps = 22/561 (3%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++L + + VNN+ I S+ +S A+ LFD+ K++++WN++I GY + + +
Sbjct: 231 VKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTF 290
Query: 102 NLFQSMPVKNI------VSWNCMIAGCIDNDRIDD-----AFDYFQAMPERNTATYNAMI 150
L Q M ++ + ++ C++ + + + + + N NA I
Sbjct: 291 YLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGL-QSNELVANAFI 349
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN------ 204
+ + + G L + R+F+ M + V S+ A+L G+ + D +AL Y+ +
Sbjct: 350 AAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNS--DPRKALDLYLQMTDSGLDPD 407
Query: 205 --VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
+ ++ +K+ + E F + F+ ++++ + G A++LF+
Sbjct: 408 WFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFD 467
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
++ + VS+N MIAGY+QNG+ +EA+ LF M+ +QP + ++ V ACS L L
Sbjct: 468 GMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRL 527
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G++ H ++ ++ V +++I MY++ G I S+ F ++ ++ SWN IIA +
Sbjct: 528 GKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGI 587
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG ++AL F +M G PD TF +L AC HAG V + ++ F M+ ++ I P E
Sbjct: 588 HGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLE 647
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HYTC+VD+L RAG+++ A ++ + MP + D+ +W SLL++C I+ N+ LGE A K+ EL
Sbjct: 648 HYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLEL 707
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P+ YV++SNL+A +G W DV RVR MK+ G+ K SWIE+G KVH FL GD
Sbjct: 708 EPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEM 767
Query: 563 HPCIDKIHLELKRASVQMKSV 583
P ++++ +R V++ S+
Sbjct: 768 LPELEEVRETWRRLEVKISSI 788
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 222/453 (49%), Gaps = 24/453 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
VFV NA I+ + G + A ++F+ M +++++WN+II G+ +NGFLQES N F+ M
Sbjct: 136 VFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLV 195
Query: 109 -----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRL 159
V ++ + ++ C + I+ + N++I + K L
Sbjct: 196 GEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFL 255
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGY 215
EA LF++ ++N++S+ +M+ G+ ++ +V + L M ++ +T++
Sbjct: 256 SEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLP 315
Query: 216 VKNER--FCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
V ER +EL + N V A I + + G L ++ +F+ + K S
Sbjct: 316 VCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSS 375
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+NA++ GYAQN +AL L+ M + PD T+ S+ ACS ++ L+ G + H +
Sbjct: 376 WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFAL 435
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
RNG + + +++++Y CG +++ F + +LVSWN +IA ++Q+G ++A+
Sbjct: 436 RNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAIN 495
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGH--AGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
F QM +G P I + + AC A ++ + + F L + I S + ++D
Sbjct: 496 LFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS---SSIID 552
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ ++ G + + +I + E D W ++A
Sbjct: 553 MYAKGGCIGLSQRIFDRLR-EKDVASWNVIIAG 584
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 194/404 (48%), Gaps = 46/404 (11%)
Query: 46 STQYV--FVNNAKISAL-SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
STQ+ FV N +I + S G S +R +FD++ K++ WNAI++ Y +N +++ +
Sbjct: 27 STQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMS 86
Query: 103 LFQSM-----PVKNIVSWNCMIAGCID-------------NDRIDDAFDYFQAMPERNTA 144
+F + + + C+I C ++D D F
Sbjct: 87 IFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVG------- 139
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDY 199
NA+I+ + K G +EEA ++FE MP RN++S+ +++ GF + G + ++ L
Sbjct: 140 --NALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGE 197
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMP---DYDKNVFVVTAMITGFCKVGMLEN 256
SF V+ V + E E + + ++ + V ++I + K L
Sbjct: 198 ESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSE 257
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-----MQPDDATLVSVF 311
A+LLF++ K+ VS+N+MI GYA+ E+ R F + KM M+ D+ T+++V
Sbjct: 258 AQLLFDKNDKKNIVSWNSMIGGYARE---EDVCRTFYLLQKMQTEDAKMKADEFTILNVL 314
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
C L ++ H R+G ++N V NA I Y+RCG + SE F + + +
Sbjct: 315 PVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVS 374
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
SWN ++ +AQ+ KAL + QM +G DPD T SLL AC
Sbjct: 375 SWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 127/228 (55%), Gaps = 5/228 (2%)
Query: 237 NVFVV-TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
N FV+ T +IT + G ++R++F++++ K+ +NA+++ Y +N + E+A+ +FS +
Sbjct: 32 NDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL 91
Query: 296 IKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
I + + +PD+ TL V AC+ L L G+ H + + ++V V NA+I MY +CG
Sbjct: 92 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 151
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM--GLNGFDPDGITFLSLL 412
+ ++ F + NLVSWN+II F+++G +++ F +M G F PD T +++L
Sbjct: 152 VEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVL 211
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
C + + M + L VK+ G+ L+D+ S+ L +A
Sbjct: 212 PVCAGEEDIEKGMAVHGLAVKL-GLNEELMVNNSLIDMYSKCRFLSEA 258
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/432 (37%), Positives = 257/432 (59%), Gaps = 5/432 (1%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +I+ ++K LEEA LF++MP RNV+S+T M+ + D+A L +M V+
Sbjct: 324 NILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVM 383
Query: 207 SWTVMITGYVKN-ERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+ ++ ER + ++L + + +VFV +A+I + K+G L A +F
Sbjct: 384 PNMFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFRE 443
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ D V +N++IA +AQ+ +EAL L+ M ++ D +TL SV AC++L LL G
Sbjct: 444 MMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELG 503
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
RQ+HV V++ F+ ++ + NA++ MY +CG + D++ F ++ +++SW+T+IA AQ+
Sbjct: 504 RQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQN 561
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +AL F M + G P+ IT L +L AC HAG VNE F M +YGI P EH
Sbjct: 562 GFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREH 621
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y C++D+L RA +L+ ++ M E D W +LL AC NV+L AAK++ +LD
Sbjct: 622 YGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLD 681
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
PQ++ YV+LSN+YA + W DV VR MK++G+ K+ SWIE+ ++H F+ GD SH
Sbjct: 682 PQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSH 741
Query: 564 PCIDKIHLELKR 575
P ID+I+ +L +
Sbjct: 742 PQIDEINRQLNQ 753
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 161/330 (48%), Gaps = 25/330 (7%)
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
E L RR++ S +LD ++G +D +++ ++ + G V+ +
Sbjct: 253 ETESLLNHCYRRDLPSAMHVLDSMERRG------VWADSITYSELIK-CCLAHGAVREGK 305
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
R +F Y F+ +I + K +LE A++LF+++ ++ VS+ MI+ Y+
Sbjct: 306 RVH-RHIFSN--GYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYS 362
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
+ + A+RL + M + + P+ T SV AC L L +Q H +++ G E++V
Sbjct: 363 NAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVF 419
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V +A+I +YS+ G +L++ FR++ + + V WN+IIAAFAQH ++AL + M G
Sbjct: 420 VRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVG 479
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH----YTCLVDILSRAGQ 456
F D T S+L AC S+ L EL + + + + L+D+ + G
Sbjct: 480 FPADQSTLTSVLRAC-------TSLSLLELGRQAHVHVLKFDQDLILNNALLDMYCKCGS 532
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LE A I M + D W +++A N
Sbjct: 533 LEDAKFIFNRMA-KKDVISWSTMIAGLAQN 561
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 169/358 (47%), Gaps = 30/358 (8%)
Query: 44 LFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+FS Y F+ N I+ + + A+ LFD+M ++V++W +I+ Y +
Sbjct: 311 IFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRA 370
Query: 101 KNL----FQSMPVKNIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISG 152
L F+ + N+ +++ ++ C +R+ D + E + +A+I
Sbjct: 371 MRLLAFMFRDGVMPNMFTFSSVLRAC---ERLYDLKQLHSWIMKVGLESDVFVRSALIDV 427
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------V 206
+ K G L EA ++F +M + + + +++ F + + D+A L Y S + V
Sbjct: 428 YSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHL--YKSMRRVGFPADQS 485
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
+ T ++ R+ + +D+++ + A++ +CK G LE+A+ +F R+
Sbjct: 486 TLTSVLRACTSLSLLELGRQAHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAK 545
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG--- 323
KD +S++ MIAG AQNG + EAL LF M +P+ T++ V ACS L+NEG
Sbjct: 546 KDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYY 605
Query: 324 -RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAA 379
R + L G + ++ + R + D +++ P++V+W T++ A
Sbjct: 606 FRSMNNLY---GIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDA 660
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q + +NNA + + G + A+ +F++M KDVI+W+ +I G QNGF E+ NLF+SM
Sbjct: 515 QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESM 574
Query: 108 ----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAMISGFLKH 156
P N ++ ++ C +++ + YF++M P R Y M+ +
Sbjct: 575 KVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGRE--HYGCMLDLLGRA 632
Query: 157 GRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKA 193
+L++ +L +M +V+++ +LD + VD A
Sbjct: 633 EKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLA 670
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 292/519 (56%), Gaps = 22/519 (4%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+V NA ++ G++ AR +FD M +DVI+WN +I+GY++NG++ ++ +F M +
Sbjct: 153 YVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE 212
Query: 111 NI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEEA 162
+ + M+ C ++ + + + E+ NA+++ +LK GR++EA
Sbjct: 213 GVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA 272
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK----- 217
+F +M RR+VI++T M++G+++ G+V+ A L M F+ V V I V
Sbjct: 273 RFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDA 332
Query: 218 ---NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
N+ C + D + + T++I+ + K ++ +F ++A
Sbjct: 333 LKLNDGKCLHGWAIRQKVCSD--IIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSA 390
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+IAG QN + +AL LF M + D++P+ ATL S+ A + L L + H + + G
Sbjct: 391 IIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTG 450
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIH----SPNLVSWNTIIAAFAQHGHYEKAL 390
F +++ ++ +YS+CG + + F I S ++V W +I+ + HG AL
Sbjct: 451 FMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNAL 510
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F +M +G P+ ITF S L+AC H+G V E + LF M++ Y + S HYTC+VD+
Sbjct: 511 QVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDL 570
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L RAG+L++A+ + +PFE + +WG+LLAACV + NV+LGE+AA K+ EL+P+N+ Y
Sbjct: 571 LGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNY 630
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
V+L+N+YAA G W+D+ +VR +M+ G+ K+ +S IEI
Sbjct: 631 VLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEI 669
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 128/257 (49%), Gaps = 9/257 (3%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
+++ + + G + AR LF+ + +S+N +I Y ++G+ +A+ +F M+
Sbjct: 51 ILSTLSVTYALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEG 110
Query: 300 MQ--PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
++ PD T V A L+ ++ G H ++R+ F + V NA++ MY G +
Sbjct: 111 IKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEM 170
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F + + +++SWNT+I+ + ++G+ AL+ F M G DPD T +S+L CGH
Sbjct: 171 ARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGH 230
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
+ ++ +L V+ + E LV++ + G++++A + G D W
Sbjct: 231 LKGLEMGRNVHKL-VEEKRLGDKIEVKNALVNMYLKCGRMDEA-RFVFGRMERRDVITW- 287
Query: 478 SLLAACVINLNVELGEL 494
C+IN +E G++
Sbjct: 288 ----TCMINGYIEDGDV 300
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 55/293 (18%), Positives = 110/293 (37%), Gaps = 69/293 (23%)
Query: 18 PPILRILSTPDSCGN-FTPHSSNCL----IRLFSTQYVFVNNAKISALSRAGKISAARQL 72
P + I S +CG+ + CL IR + + + IS ++ I ++
Sbjct: 317 PNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRV 376
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF 132
F + W+AII G QN ++++ +LF+ M +++
Sbjct: 377 FSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDV-------------------- 416
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS----YTAMLDGFMKKG 188
E N AT N+++ + L + + + + +S T ++ + K G
Sbjct: 417 -------EPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469
Query: 189 EVDKAR----ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAM 244
++ A + + K+VV W +I+GY + A ++F M
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM------------- 516
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ G+ N ++F + + + +G+ EE L LFS M++
Sbjct: 517 ----VRSGVTPNE------------ITFTSALNACSHSGLVEEGLTLFSFMLE 553
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/454 (36%), Positives = 273/454 (60%), Gaps = 15/454 (3%)
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
T T NA+++ + K GR++++ LFE R+++S+ M+ F + +A A M
Sbjct: 148 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVL 207
Query: 203 KNV----VSWTVMITGYVKNERFCEAREL---FYRMPDYDKNVFVVTAMITGFCKVGMLE 255
+ V V+ ++ ER +E+ R D +N FV +A++ +C +E
Sbjct: 208 EGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVE 267
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTAC 314
+ R +F+ I + +NAMI+GYA+NG+ E+AL LF MIK+ + P+ T+ SV AC
Sbjct: 268 SGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPAC 327
Query: 315 -SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
+L + +G++ H IRN ++++V +A++ MY++CG + S F ++ + N+++W
Sbjct: 328 VHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITW 387
Query: 374 NTIIAAFAQHGHYEKALIFFSQM----GLNG-FDPDGITFLSLLSACGHAGKVNESMDLF 428
N +I A HG E+AL F M G G P+ +TF+++ +AC H+G ++E ++LF
Sbjct: 388 NVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF 447
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD-TGVWGSLLAACVINL 487
M +G+ P+S+HY C+VD+L RAGQLE+A+++ MP E D G W SLL AC I+
Sbjct: 448 YRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQ 507
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
NVELGE+AAK + L+P ++ YV+LSN+Y++AG+W VR M++ GV K+ SWI
Sbjct: 508 NVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWI 567
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
E ++VH F+ GD+SHP +++H L+ S +M+
Sbjct: 568 EFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMR 601
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 200/447 (44%), Gaps = 70/447 (15%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
F NNA ++ ++ G++ ++ LF+ +D+++WN +I+ + Q+ E+ F+ M +
Sbjct: 148 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVL 207
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN-----AMISGFLKHGRLE 160
+ + V+ ++ C +R+D + + N N A++ + ++E
Sbjct: 208 EGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVE 267
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS-----FKNVVSWTVMITGY 215
R+F+ + R + + AM+ G+ + G +KA L M N + ++
Sbjct: 268 SGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPAC 327
Query: 216 VKN-ERFCEARELF-YRMPD-YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
V + + +E+ Y + + ++ V +A++ + K G L +R +F + K+ +++
Sbjct: 328 VHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITW 387
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKM-----DMQPDDATLVSVFTACSALQLLNEG---- 323
N +I +G EEAL LF M+ + +P++ T ++VF ACS L++EG
Sbjct: 388 NVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF 447
Query: 324 -RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
R H +G E V+ + R G + E A+ + NT+ A F +
Sbjct: 448 YRMKH----DHGVEPTSDHYACVVDLLGRAGQL---EEAYELV--------NTMPAEFDK 492
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-VYGIIPS- 440
G + SLL AC +++++++L E+ K + + P+
Sbjct: 493 VGAWS----------------------SLLGAC----RIHQNVELGEVAAKNLLHLEPNV 526
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGM 467
+ HY L +I S AG KA ++ + M
Sbjct: 527 ASHYVLLSNIYSSAGLWNKAMEVRKNM 553
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 21/198 (10%)
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF-EANVSVCNAV 345
EA+ + M +PD+ +V A S LQ L G Q H ++ G+ ++V+V N +
Sbjct: 75 EAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTL 134
Query: 346 ITMYSRCGGIL--------------------DSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+ MY +CGGI DS+ F ++VSWNT+I++F+Q
Sbjct: 135 VNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDR 194
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+ +AL FF M L G + DG+T S+L AC H +++ ++ +++ +I +S +
Sbjct: 195 FSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGS 254
Query: 446 CLVDILSRAGQLEKAWQI 463
LVD+ Q+E ++
Sbjct: 255 ALVDMYCNCRQVESGRRV 272
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR + V +A + ++ G ++ +R++F++M K+VITWN +I +G +E+
Sbjct: 345 IRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEAL 404
Query: 102 NLFQSMPVK---------NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYN 147
LF++M + N V++ + A C + I + + F M E + Y
Sbjct: 405 ELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYA 464
Query: 148 AMISGFLKHGRLEEATRLFEQMP 170
++ + G+LEEA L MP
Sbjct: 465 CVVDLLGRAGQLEEAYELVNTMP 487
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 187/610 (30%), Positives = 310/610 (50%), Gaps = 92/610 (15%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTK---DVITWNAIITGYWQNGFLQESKNLFQS 106
VFV NA ++ SR+G + A +FD++T K DVI+WN+I+ + + + + +LF
Sbjct: 184 VFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSE 243
Query: 107 MPVKNIVSWNCMIAGCIDNDRID--------DAFDYFQAMPE-RNTATY----------- 146
M ++ N+R D A +A+P+ + +Y
Sbjct: 244 MTT--------IVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAF 295
Query: 147 --NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
NA+I + K G +++A +F M ++V+S+ AM+ G+ + G+ A L M +N
Sbjct: 296 VCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKEN 355
Query: 205 ----VVSWTVMITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLEN-- 256
V++W+ +I GY + EA + F +M Y + N + ++++ +G L
Sbjct: 356 IPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGM 415
Query: 257 ---------------------------------------------ARLLFERI--QPKDC 269
AR +F I + ++
Sbjct: 416 ETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNV 475
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMD--MQPDDATLVSVFTACSALQLLNEGRQSH 327
V++ MI GYAQ G + +AL+LFS MI + P+ T+ + AC+ L L G+Q H
Sbjct: 476 VTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIH 535
Query: 328 VLVIRNG-FEANVS-VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
V R+ +E++V V N +I MYS+CG + + F + N VSW ++++ + HG
Sbjct: 536 AYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGR 595
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
++AL F +M GF PD I+FL LL AC H+G V++ +D F++M YG+I S++HY
Sbjct: 596 GKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYA 655
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C++D+L+R+G+L+KAW+ Q MP E +W +LL+AC ++ NVEL E A K+ + +
Sbjct: 656 CVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAE 715
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
N Y ++SN+YA A W+DV R+R LMK+ G+ K+ SW++ F GD SHP
Sbjct: 716 NDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPL 775
Query: 566 IDKIHLELKR 575
+I+ L+R
Sbjct: 776 SPEIYSLLER 785
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 166/340 (48%), Gaps = 22/340 (6%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV- 205
+++ +L G +A + E++ + + ++ +++G +D+A +S M
Sbjct: 87 TGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTK 146
Query: 206 -----VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
+ + + G + + R A ++ NVFV A++ + + G LE+A L+
Sbjct: 147 PDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLV 206
Query: 261 FERIQPK---DCVSFNAMIAGYAQNGVAEEALRLFSGMIKM------DMQPDDATLVSVF 311
F+ I K D +S+N+++A + + AL LFS M + + + D ++V++
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNIL 266
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
AC++L+ L + ++ H IRNG A+ VCNA+I Y++CG + D+ F + ++V
Sbjct: 267 PACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVV 326
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SWN ++ + Q G + A F M D IT+ ++++ G E++D F+ M
Sbjct: 327 SWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQM 386
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+ +YG P+S ++ +LS L ++QGM A
Sbjct: 387 I-LYGSEPNS---VTIISLLSACASLG---ALSQGMETHA 419
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 215/495 (43%), Gaps = 78/495 (15%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVSWNC 117
G S A + +++ + WN ++ + + G L + + M P + +
Sbjct: 97 GATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYAL 156
Query: 118 MIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEATRLFEQMPRR--- 172
G + + R AF E N NA+++ + + G LE+A+ +F+++ R+
Sbjct: 157 KACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGID 216
Query: 173 NVISYTAMLDGFMKKGEVDKARAL----------------SDYMSFKNV---------VS 207
+VIS+ +++ +K A L SD +S N+ +
Sbjct: 217 DVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALP 276
Query: 208 WTVMITGY-VKNERFCEARELFYRMPDYDK--------NVFVV---------TAMITGFC 249
T I Y ++N F +A + Y K NVF V AM+TG+
Sbjct: 277 QTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYT 336
Query: 250 KVGMLENARLLFERIQ----PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ G A LF+ ++ P D ++++A+IAGYAQ G +EAL F MI +P+
Sbjct: 337 QSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSV 396
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGF------------EANVSVCNAVITMYSRCG 353
T++S+ +AC++L L++G ++H ++ ++ V NA+I MYS+C
Sbjct: 397 TIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCR 456
Query: 354 GILDSELAFRQI--HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF--DPDGITFL 409
+ F I N+V+W +I +AQ+G AL FS+M + P+ T
Sbjct: 457 SFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTIS 516
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT--CLVDILSRAGQLEKAWQITQGM 467
+L AC H + + + + + SS ++ CL+D+ S+ G ++ A + M
Sbjct: 517 CILMACAHLSSLRMGKQIHAYVTR-HHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSM 575
Query: 468 PFEADTGVWGSLLAA 482
P + W S+++
Sbjct: 576 PKRNEVS-WTSMMSG 589
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 11/248 (4%)
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
T ++ + G +A + ER+ P V +N ++ + + G + A+ + M++ +
Sbjct: 87 TGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTK 146
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD TL AC L G H L+ NGFE+NV VCNA++ MYSR G + D+ L
Sbjct: 147 PDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLV 206
Query: 362 FRQIHSP---NLVSWNTIIAAFAQHGHYEKALIFFSQMGL------NGFDPDGITFLSLL 412
F +I +++SWN+I+AA + + AL FS+M D I+ +++L
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNIL 266
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC + ++ ++ ++ G + L+D ++ G ++ A + M F+ D
Sbjct: 267 PACASLKALPQTKEIHSYAIR-NGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK-D 324
Query: 473 TGVWGSLL 480
W +++
Sbjct: 325 VVSWNAMV 332
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 13/190 (6%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+ + FV N I S+ G + AR +FD M ++ ++W ++++GY +G +E+ ++F
Sbjct: 544 YESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIF 603
Query: 105 QSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE-----RNTATYNAMISGFLK 155
M V + +S+ ++ C + +D DYF M + Y +I +
Sbjct: 604 DKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLAR 663
Query: 156 HGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKAR-ALSDYMSFK--NVVSWTVM 211
GRL++A + ++MP + + A+L V+ A AL+ +S K N S+T++
Sbjct: 664 SGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLI 723
Query: 212 ITGYVKNERF 221
Y R+
Sbjct: 724 SNIYATARRW 733
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 7/153 (4%)
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
S+ V+ Y CG D+ ++ V WN ++ A + G ++A+ +M
Sbjct: 84 SLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRA 143
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC--LVDILSRAGQL 457
G PD T L ACG S F ++ G S + C LV + SR+G L
Sbjct: 144 GTKPDHFTLPYALKACGELPSY-RSGSAFHGLICCNGF--ESNVFVCNALVAMYSRSGSL 200
Query: 458 EKAWQITQGMPFEA--DTGVWGSLLAACVINLN 488
E A + + + D W S++AA V N
Sbjct: 201 EDASLVFDEITRKGIDDVISWNSIVAAHVKGSN 233
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 298/551 (54%), Gaps = 18/551 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V A I ++ G + AR++F++M +D+ +W A+I G NG E+ LF+ M
Sbjct: 167 VYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRS 226
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEE 161
+ ++ + ++A + +A A+ E + NA+I + K G E
Sbjct: 227 EGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLE 286
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGY 215
A R+F M +V+S++ ++ G+ + ++ L Y+ NV + T ++
Sbjct: 287 AHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKL--YIGMINVGLATNAIVATSVLPAL 344
Query: 216 VKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
K E + +E+ F +V V +A+I + G ++ A +FE KD + +N
Sbjct: 345 GKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWN 404
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+MI GY G E A F + + +P+ T+VS+ C+ + L +G++ H V ++
Sbjct: 405 SMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKS 464
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G NVSV N++I MYS+CG + E F+Q+ N+ ++NT+I+A HG EK L F+
Sbjct: 465 GLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFY 524
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
QM G P+ +TF+SLLSAC HAG ++ L+ M+ YGI P+ EHY+C+VD++ R
Sbjct: 525 EQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGR 584
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
AG L+ A++ MP D V+GSLL AC ++ VEL EL A+++ +L +S YV+L
Sbjct: 585 AGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLL 644
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SNLYA+ W D+++VR ++K++G+ K+ SWI++G+ ++ F HP KI L
Sbjct: 645 SNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKIEETL 704
Query: 574 KRASVQMKSVD 584
+ MKS D
Sbjct: 705 NSLLLVMKSED 715
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 255/540 (47%), Gaps = 39/540 (7%)
Query: 6 YFHQTYLKRILFPPILRILSTPDSC----GNFTP---HSSNCLIRLFSTQYV--FVNNAK 56
+F T R+ PP L T + G F P HSS+ F++Q V +VN
Sbjct: 28 HFTVTSFHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSS-----FASQLVNVYVN--- 79
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV--- 113
G + A F + K +I WNAI+ G G ++ + + SM +
Sbjct: 80 ------FGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDN 133
Query: 114 -SWNCMIAGCIDNDRIDDA---FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
++ ++ C + + + N A+I F K G +E+A R+FE+M
Sbjct: 134 YTYPLVLKACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEM 193
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT------GYVKNERFCE 223
P R++ S+TA++ G M GE +A L M + ++ +V++ G ++ +
Sbjct: 194 PDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGM 253
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
A ++ ++ +++V A+I +CK G A +F + D VS++ +IAGY+QN
Sbjct: 254 ALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNC 313
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+ +E+ +L+ GMI + + + SV A L+LL +G++ H V++ G ++V V +
Sbjct: 314 LYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGS 373
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
A+I MY+ CG I ++E F +++ WN++I + G +E A F ++ P
Sbjct: 374 ALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRP 433
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ IT +S+L C G + + ++ + K G+ + L+D+ S+ G LE ++
Sbjct: 434 NFITVVSILPICTQMGALRQGKEIHGYVTKS-GLGLNVSVGNSLIDMYSKCGFLELGEKV 492
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL-DPQNSAVYVMLSNLYAAAGM 522
+ M T + ++++AC + E G ++M+E + N ++ L + + AG+
Sbjct: 493 FKQMMVRNVT-TYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGL 551
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 188/588 (31%), Positives = 301/588 (51%), Gaps = 70/588 (11%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKISALSRAGK-ISAARQLFDQMTTKDVITWNAIITGYWQN 94
H+ I L +T Y + LS + + A +F + +++ WN + G+
Sbjct: 53 HAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH--- 109
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIA-GCIDNDRI----------DDAFDYFQAMP---- 139
S PV + + CMI+ G + N AF Q +
Sbjct: 110 --------ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 140 ----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+ + + ++IS ++++GRLE+A ++F++ P R+V+SYTA++ G+ +G ++ A+
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------- 233
L D + K+VVSW MI+GY + + EA ELF M PD
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 234 ---------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+ N+ +V A+I + K G LE A LFER+ KD +S+N +I G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR--NGFE 336
Y + +EAL LF M++ P+D T++S+ AC+ L ++ GR HV + + G
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
S+ ++I MY++CG I + F I +L SWN +I FA HG + + FS+M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G PD ITF+ LLSAC H+G ++ +F M + Y + P EHY C++D+L +G
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGL 521
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
++A ++ M E D +W SLL AC ++ NVELGE A+ + +++P+N YV+LSN+
Sbjct: 522 FKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 581
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
YA+AG W +V + R L+ ++G+ K S IEI + VH F+ GD HP
Sbjct: 582 YASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 629
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 240/538 (44%), Gaps = 93/538 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ + IS + G++ A ++FD+ +DV+++ A+I GY G+++ ++ LF +PV
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
K++VSWN MI+G + +A + F+ M + N +T ++S + G +E ++
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 166 F----EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ A++D + K GE++ A L + + +K+V+SW +I GY +
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY 348
Query: 222 CEARELFYRM------PD--------------------------YDKNVFVV-------T 242
EA LF M P+ DK + V T
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A +F I K S+NAMI G+A +G A+ + LFS M K+ +QP
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD T V + +ACS +L+ GR + R TM D ++
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRH----IFR--------------TMTQ------DYKM-- 502
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+P L + +I G +++A + M + PDG+ + SLL AC G V
Sbjct: 503 ----TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEME---PDGVIWCSLLKACKMHGNVE 555
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW-QITQGMPFEADTGVWGSLLA 481
E ++K+ P S Y L +I + AG+ W ++ + D G+ +
Sbjct: 556 LGESFAENLIKIEPENPGS--YVLLSNIYASAGR----WNEVAKTRALLNDKGM-KKVPG 608
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSN---LYAAAGMWRDVTRVRLLMKEQ 536
I ++ + E + P+N +Y ML L AG D + V M+E+
Sbjct: 609 CSSIEIDSVVHEFIIGD--KFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEE 664
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/560 (32%), Positives = 295/560 (52%), Gaps = 30/560 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV NA + ++ G + ARQ+F++M +D +TWN II Y Q+ E+ +LF+ M +
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----------ERNTATYNAMISGFLKHGRL 159
IVS +A + +Q +R+ T +++I + K G +
Sbjct: 523 CGIVSDGACLASTLKA--CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGY 215
++A ++F +P +V+S A++ G+ + +++A L M + V +++ ++
Sbjct: 581 KDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR-------LLFERIQPKD 268
K E + ++ K F G +GM N+R L E PK
Sbjct: 640 HKPESLTLGTQFHGQIT---KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
V + M++G++QNG EEAL+ + M + PD AT V+V CS L L EGR H
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYE 387
L+ + + N +I MY++CG + S F ++ N+VSWN++I +A++G+ E
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
AL F M + PD ITFL +L+AC HAGKV++ +FE+M+ YGI +H C+
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACM 876
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
VD+L R G L++A + + D +W SLL AC I+ + GE++A+K+ EL+PQNS
Sbjct: 877 VDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNS 936
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
+ YV+LSN+YA+ G W +R +M+++GV K YSWI++ + H F GD SH I
Sbjct: 937 SAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIG 996
Query: 568 KIHLELKRASVQMKSVDDFV 587
KI + L+ MK DD V
Sbjct: 997 KIEMFLEDLYDLMK--DDAV 1014
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 228/499 (45%), Gaps = 86/499 (17%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG----FLQESKNLFQSM 107
+ NA + ++ ++S A + FD KDV WN++++ Y G L+ +LF++
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 108 PVKNIVSWNCMIAGCIDN-----------------------------------DRIDDAF 132
N +++ +++ C DRI DA
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 215
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM----PRRNVISYTAMLDGFMKKG 188
F+ + + NT + + SG++K G EEA +FE+M R + +++ +++ +++ G
Sbjct: 216 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 275
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE--ARELFYRMPDYD----------- 235
++ AR L MS +VV+W VMI+G+ K R CE A E F+ M
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGK--RGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 236 --------------------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
N++V +++++ + K +E A +FE ++ K+
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V +NAMI GYA NG + + + LF M DD T S+ + C+A L G Q H +
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+I+ N+ V NA++ MY++CG + D+ F ++ + V+WNTII ++ Q + +A
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEA 513
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
F +M L G DG S L AC H + + + L VK G+ + L+D
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC-GLDRDLHTGSSLID 572
Query: 450 ILSRAGQLEKAWQITQGMP 468
+ S+ G ++ A ++ +P
Sbjct: 573 MYSKCGIIKDARKVFSSLP 591
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 192/376 (51%), Gaps = 21/376 (5%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
I+ R GK+ AR LF +M++ DV+ WN +I+G+ + G + F +M ++ S
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 117 CMIAGCIDNDRIDDAFD-----YFQAMP---ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
+ + I D + +A+ N ++++S + K ++E A ++FE
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVKNERFC 222
+ +N + + AM+ G+ GE K L +M K+ ++T +++ +
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMEL--FMDMKSSGYNIDDFTFTSLLSTCAASHDL- 444
Query: 223 EARELFYRM---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
E F+ + KN+FV A++ + K G LE+AR +FER+ +D V++N +I Y
Sbjct: 445 EMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSY 504
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
Q+ EA LF M + D A L S AC+ + L +G+Q H L ++ G + ++
Sbjct: 505 VQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDL 564
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
+++I MYS+CG I D+ F + ++VS N +IA ++Q+ + E+A++ F +M
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTR 623
Query: 400 GFDPDGITFLSLLSAC 415
G +P ITF +++ AC
Sbjct: 624 GVNPSEITFATIVEAC 639
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 225/458 (49%), Gaps = 24/458 (5%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+L ++V ++ +S S+ K+ AA ++F+ + K+ + WNA+I GY NG +
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVM 413
Query: 102 NLFQSMPVK--NI--VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGF 153
LF M NI ++ +++ C + ++ + + ++ A NA++ +
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
K G LE+A ++FE+M R+ +++ ++ +++ +A L M+ +VS +
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLA 533
Query: 214 GYVKNERFCEARELFYRMPD---------YDKNVFVVTAMITGFCKVGMLENARLLFERI 264
+K C Y+ D+++ +++I + K G++++AR +F +
Sbjct: 534 STLKA---CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
VS NA+IAGY+QN + EEA+ LF M+ + P + T ++ AC + L G
Sbjct: 591 PEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGT 649
Query: 325 QSHVLVIRNGFEANVSVCN-AVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFAQ 382
Q H + + GF + +++ MY G+ ++ F ++ SP ++V W +++ +Q
Sbjct: 650 QFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQ 709
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+G YE+AL F+ +M +G PD TF+++L C + E + L+ + +
Sbjct: 710 NGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
T L+D+ ++ G ++ + Q+ M ++ W SL+
Sbjct: 770 SNT-LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 7/217 (3%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L G+ H + G ++ + NA++ +Y++C + +E F + ++ +WN++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
++ G K L F + N P+ TF +LS C V + M+K+ G+
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM-GLER 193
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+S LVD+ ++ ++ A ++ + + + +T W L + V E L ++M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 500 R-ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
R E + +V + N Y G +D RLL E
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKD---ARLLFGE 286
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 288/518 (55%), Gaps = 17/518 (3%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV-----KNIVSWNCMIAGCI 123
AR+LFD+M KDVI W+ +I GY Q Q +F+ M + + V ++ C
Sbjct: 202 ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACA 261
Query: 124 DNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
+ + + R + N++I + K A ++F ++ +RN +S+ +
Sbjct: 262 SSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNS 321
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTV------MITGYVKNERFCEARELFYRMPD 233
ML GF+ +A++L M + V + V I Y + C++
Sbjct: 322 MLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRG 381
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ N V++A+I + K ++E A +F R++ +D VS++ MI+G+A G +EA+ ++
Sbjct: 382 SEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQ 441
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + ++P+ T++++ ACS L + +H + IR GF + V+V AV+ MYS+CG
Sbjct: 442 EMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCG 501
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
IL S AF Q+ N+V+W+ +IAA+ +G +AL F++M +G P+ +T LS+L+
Sbjct: 502 EILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLA 561
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H G V E + LF+ MV+ G+ P EHY+C+VD+L RAG+L+ A ++ + MP
Sbjct: 562 ACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPDNLKN 621
Query: 474 G--VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
G +WGSLL+AC ELG+ A ++ EL+P NSA Y++ S++YAA G+W D R+R+
Sbjct: 622 GASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRV 681
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
L KE+GV YS + I NK F+ GD SHP D+I
Sbjct: 682 LAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPRSDEI 719
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 226/491 (46%), Gaps = 29/491 (5%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
+FPPIL+ S + H+ CLI+ + + N+ + R G A +F+
Sbjct: 50 VFPPILKAWSFLSHRHGKSLHA--CLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNS 107
Query: 76 MT-TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN---------IVSWNCMIAGCIDN 125
M ++D ++WN +I G+ NG L F + V +V C I G +
Sbjct: 108 MRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHD 167
Query: 126 DRIDDAF---DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
I + F A+ ++ N+++S ++ +E A LF++M ++VI+++ M+
Sbjct: 168 GLILHGYLIKSGFWAI----SSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIG 222
Query: 183 GFMKKGEVDKARALSDYMSF-----KNVVSWTVMITGYVKNERFCEAREL--FYRMPDYD 235
G+++ E + M + V ++ + C R + +D
Sbjct: 223 GYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFD 282
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
++FV ++I + K +A +F I ++ VS+N+M++G+ N EA L S M
Sbjct: 283 CDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSM 342
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
K ++ D+ TLV++ C + H ++IR G EAN V +A+I Y++C I
Sbjct: 343 RKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLI 402
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F ++ ++VSW+T+I+ FA G ++A+ + +M + P+ IT ++LL AC
Sbjct: 403 EIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEAC 462
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
++ S + ++ G T +VD+ S+ G++ + + + + +
Sbjct: 463 SVTAELKRSKWAHGVAIR-QGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALK-NIVT 520
Query: 476 WGSLLAACVIN 486
W +++AA +N
Sbjct: 521 WSAMIAAYGMN 531
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 177/371 (47%), Gaps = 48/371 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV N+ I S+ +A ++F++++ ++ ++WN++++G+ N E+++L SM
Sbjct: 285 LFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRK 344
Query: 110 KNIVS------------------WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
+ + + ++C C+ + E N +A+I
Sbjct: 345 ERVETDEVTLVNILQICKYFVHPFHCKSIHCV----------MIRRGSEANELVLSALID 394
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ K +E A +F +M RR+V+S++ M+ GF G+ D+A A+ M +++V V+
Sbjct: 395 AYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMD-RDLVKPNVI 453
Query: 212 ----------ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
+T +K ++ + + V V TA++ + K G + +R F
Sbjct: 454 TIINLLEACSVTAELKRSKWAHGVAI---RQGFASEVTVGTAVVDMYSKCGEILASRRAF 510
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
+++ K+ V+++AMIA Y NG+A EAL LF+ M + ++P+ T +SV ACS L+
Sbjct: 511 DQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVE 570
Query: 322 EGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS----WNTI 376
EG +++ G E + ++ M R G LD+ + + NL + W ++
Sbjct: 571 EGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGK-LDTAIEVIKAMPDNLKNGASIWGSL 629
Query: 377 IAAFAQHGHYE 387
++A +G E
Sbjct: 630 LSACRSYGLTE 640
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 114/238 (47%), Gaps = 4/238 (1%)
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ +D VS+N +I G+ NG L F+ +P+ +T+V V AC L ++G
Sbjct: 110 RSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGL 169
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H +I++GF A SV N++++MY EL F ++H ++++W+ +I + Q
Sbjct: 170 ILHGYLIKSGFWAISSVQNSLLSMYVDADMECAREL-FDEMHEKDVIAWSVMIGGYLQWE 228
Query: 385 HYEKALIFFSQMGL-NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
+ L F +M L G +PDG+ +S+L AC + V + L++ G
Sbjct: 229 EPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIH-RGFDCDLFV 287
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
L+D+ S+ A+++ + + + W S+L+ V+N N + MR+
Sbjct: 288 ENSLIDMYSKCKDAGSAFKVFNEIS-QRNNVSWNSMLSGFVLNENYSEAQSLISSMRK 344
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 8 HQTYLKRILFPPILRILSTPDSCG-----NFTPHSSNCLIRLFSTQYVFVNNAKISALSR 62
+Q + ++ P ++ I++ ++C + + IR V V A + S+
Sbjct: 440 YQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSK 499
Query: 63 AGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCM 118
G+I A+R+ FDQ+ K+++TW+A+I Y NG E+ LF M N V+ +
Sbjct: 500 CGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSV 559
Query: 119 IAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+A C +++ F++M E Y+ M+ + G+L+ A + + MP
Sbjct: 560 LAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMP 616
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 132/302 (43%), Gaps = 32/302 (10%)
Query: 33 FTPHSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
F S +C +IR S V +A I A ++ I A ++F +M +DV++W+ +I+G+
Sbjct: 368 FHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGF 427
Query: 92 WQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
G E+ ++Q M +++V N + I + + E + + ++
Sbjct: 428 AHCGKPDEAIAVYQEMD-RDLVKPNVIT--------IINLLEACSVTAELKRSKWAHGVA 478
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
++ G E T TA++D + K GE+ +R D ++ KN+V+W+ M
Sbjct: 479 --IRQGFASEVT------------VGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAM 524
Query: 212 ITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
I Y N EA LF M + N +++ G++E LF+ + +
Sbjct: 525 IAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELG 584
Query: 270 VS-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ ++ M+ + G + A+ + M +++ + S+ +AC + L G+
Sbjct: 585 LEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPD-NLKNGASIWGSLLSACRSYGLTELGK 643
Query: 325 QS 326
++
Sbjct: 644 EA 645
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 5/254 (1%)
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
+ NG +E + + + K +Q D ++ + G+ H +I+ GF++
Sbjct: 23 SANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDSFT 82
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
S+ N+++ Y RCG + F + S + VSWN +I +G L +F+ +
Sbjct: 83 SIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARV 142
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
GF+P+ T + ++ AC G ++ + L ++K G S L+ + A +E
Sbjct: 143 AGFEPNISTMVLVIQACRILGTKHDGLILHGYLIK-SGFWAISSVQNSLLSMYVDA-DME 200
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
A ++ M E D W ++ + ++G +KM + VM+S L A
Sbjct: 201 CARELFDEM-HEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKA 259
Query: 519 AAGMWRDVTRVRLL 532
A RDV RL+
Sbjct: 260 CASS-RDVCTGRLV 272
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 180/582 (30%), Positives = 302/582 (51%), Gaps = 69/582 (11%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
+S + G + R++FD M K+V WN +++ Y + G +ES LF+ M K I
Sbjct: 3 VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI---- 58
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------- 169
+ R + A + F + +R+ ++N+MISG++ +G E +++QM
Sbjct: 59 -------EGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDV 111
Query: 170 ---------------------------------PRRNVISYTAMLDGFMKKGEVDKARAL 196
RR S T +LD + K G++D A +
Sbjct: 112 DLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNT-LLDMYSKCGDLDGALRV 170
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGML 254
+ M +NVVSWT MI GY ++ A L +M +V +T+++ + G L
Sbjct: 171 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 230
Query: 255 ENARLLFERIQPKDCVS----FNAMIAGYAQNGVAEEALRLFSGMIKMD----------M 300
+N + + + I+ + S NA++ YA+ G E A +FS M+ D +
Sbjct: 231 DNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL 290
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+PD T+ + AC++L L G++ H ++RNG+ ++ V NA++ +Y +CG + + L
Sbjct: 291 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 350
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F I S +LVSW +IA + HG+ +A+ F++M G +PD ++F+S+L AC H+G
Sbjct: 351 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 410
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + F +M + I P EHY C+VD+LSR G L KA++ + +P D +WG+LL
Sbjct: 411 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 470
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
C I ++EL E A+++ EL+P+N+ YV+L+N+YA A W +V R+R + ++G+ K
Sbjct: 471 CGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRK 530
Query: 541 QCAYSWIEIGNKVHYFLGG-DMSHPCIDKIHLELKRASVQMK 581
SWIEI +V+ F+ G + SHP KI LK+ +MK
Sbjct: 531 NPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 572
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 163/348 (46%), Gaps = 61/348 (17%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
++S + G L+E R+F+ M ++NV + M+ + K G+ ++ L +
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICL-----------F 50
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+M+ ++ +R A ELF ++ D D
Sbjct: 51 KIMVEKGIEGKRSESASELFDKLCDRD--------------------------------- 77
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
+S+N+MI+GY NG+ E L ++ M+ + + D AT++SV C+ L+ G+ H
Sbjct: 78 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHS 137
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
L I++ FE ++ N ++ MYS+CG + + F ++ N+VSW ++IA + + G +
Sbjct: 138 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDG 197
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC-- 446
A+I QM G D + S+L AC +G ++ D+ + +K + +S + C
Sbjct: 198 AIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKANNM--ASNLFVCNA 254
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
L+D+ ++ G +E A V+ +++ +I+ N +GEL
Sbjct: 255 LMDMYAKCGSMEGA------------NSVFSTMVVKDIISWNTMVGEL 290
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 188/425 (44%), Gaps = 66/425 (15%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N + S+ G + A ++F++M ++V++W ++I GY ++G+ + L Q M + +
Sbjct: 151 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGV 210
Query: 113 ---------VSWNCMIAGCIDNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEA 162
+ C +G +DN + D DY +A N NA++ + K G +E A
Sbjct: 211 KLDVVAITSILHACARSGSLDNGK--DVHDYIKANNMASNLFVCNALMDMYAKCGSMEGA 268
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+F M +++IS+ M+ G +K A L S + + I GY+ +
Sbjct: 269 NSVFSTMVVKDIISWNTMV-GELKPDSRTMACILPACASL-SALERGKEIHGYILRNGYS 326
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
R V A++ + K G+L ARLLF+ I KD VS+ MIAGY +
Sbjct: 327 SDRH-------------VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMH 373
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G EA+ F+ M ++PD+ + +S+ ACS LL +G + +++N F
Sbjct: 374 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR-FFYIMKNDFNI----- 427
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
P L + ++ ++ G+ KA F + +
Sbjct: 428 ------------------------EPKLEHYACMVDLLSRTGNLSKAYKFIETLPIA--- 460
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP-SSEHYTCLVDILSRAGQLEKA 460
PD + +LL C ++ ++L E + +V+ + P ++ +Y L +I + A + E+
Sbjct: 461 PDATIWGALLCGC----RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEV 516
Query: 461 WQITQ 465
++ +
Sbjct: 517 KRMRE 521
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V NA + + G + AR LFD + +KD+++W +I GY +G+ E+ F M
Sbjct: 331 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 390
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEA 162
I VS+ ++ C + ++ + +F M E Y M+ + G L +A
Sbjct: 391 IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 450
Query: 163 TRLFEQMP 170
+ E +P
Sbjct: 451 YKFIETLP 458
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 191/647 (29%), Positives = 306/647 (47%), Gaps = 116/647 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N I ++G +S AR LFD M + +TW +I GY QN +E+ LF M
Sbjct: 132 IFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGR 191
Query: 110 KNI----VSWNCMIAGCIDNDRIDD----------------------------------- 130
I VS +++G + D +++
Sbjct: 192 HGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGL 251
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRR------------ 172
AF F +PER++ T+NA+++G+ K G EA LF +M P
Sbjct: 252 AFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQ 311
Query: 173 ---------------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
NV A+LD + K V +A L M + +S+ V+
Sbjct: 312 LDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVL 371
Query: 212 ITGYVKNERFCEARELFYRM-------------------------------------PDY 234
+T Y N R E+ ELF + D
Sbjct: 372 VTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDA 431
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ V +++ + K G A +F + + V + AMI+ Y Q G+ E+ L+LF
Sbjct: 432 ISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVE 491
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + + D AT S+ AC++L L G+Q H +I +G+ +NV +A++ MY++CG
Sbjct: 492 MQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGS 551
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I D+ F+++ N VSWN +I+A+AQ+G + L F +M +G PD ++ LS+L A
Sbjct: 552 IKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCA 611
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V E + F+ M ++Y ++P EHY +D+L R G+ ++A ++ MPFE D
Sbjct: 612 CSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEI 671
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDP-QNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+W S+L +C I+ N EL + AA ++ + +++A YV +SN+YAAAG W +V +V+ M
Sbjct: 672 MWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAM 731
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
+E+GV K AYSW+EI +K H F D +HP + +I +L +M
Sbjct: 732 RERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKM 778
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 184/380 (48%), Gaps = 39/380 (10%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
NT N ++ FL+ G L A +LF++MP +N+ S M+ G++K G + +AR L D M
Sbjct: 100 NTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMF 159
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------------- 233
+ V+WT++I GY +N +F EA LF M PD
Sbjct: 160 QRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQ 219
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
YD + V +++ +CK L A LF I +D V+FNA++ GY++ G
Sbjct: 220 VHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGF 279
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EA+ LF M ++ +P + T ++ TA L + G+Q H V++ F NV V NA
Sbjct: 280 NREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANA 339
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ YS+ ++++ F ++ + +S+N ++ +A +G +++L F ++ GFD
Sbjct: 340 LLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRR 399
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
F +LLS + ++ + + V I LVD+ ++ G+ +A +I
Sbjct: 400 NFPFATLLSIAAISLNLDIGRQIHSQTI-VTDAISEILVGNSLVDMYAKCGEFGEANRIF 458
Query: 465 QGMPFEADTGVWGSLLAACV 484
+ ++ W +++++ V
Sbjct: 459 SDLAIQSSVP-WTAMISSYV 477
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 232/520 (44%), Gaps = 55/520 (10%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
+ P R L T + H +I+ + +N + + + G ++ AR+LFD+
Sbjct: 67 IIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDE 126
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF 135
M K++ + N +I GY ++G L E++ LF SM + V+W +I G N++ +AF F
Sbjct: 127 MPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLF 186
Query: 136 QAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFMKK 187
M + + ++SGF + + E ++ + + ++ ++LD + K
Sbjct: 187 IEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKT 246
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD-------------- 233
+ A L + + ++ V++ ++TGY K EA LF++M +
Sbjct: 247 RSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAIL 306
Query: 234 -----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ NVFV A++ + K + A LF + D +
Sbjct: 307 TAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGI 366
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD---ATLVSVFTACSALQL-LNEGRQS 326
S+N ++ YA NG +E+L LF + + ATL+S+ +A+ L L+ GRQ
Sbjct: 367 SYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSI----AAISLNLDIGRQI 422
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H I + + V N+++ MY++CG ++ F + + V W +I+++ Q G +
Sbjct: 423 HSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLH 482
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
E L F +M D T+ S++ AC + L ++ G I + +
Sbjct: 483 EDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGS-GYISNVFSGSA 541
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LVD+ ++ G ++ A Q+ Q MP ++ W +L++A N
Sbjct: 542 LVDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISAYAQN 580
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 289/550 (52%), Gaps = 20/550 (3%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ + S+ G A +F + D++ W+A+IT Q G +ES LF M +
Sbjct: 350 FIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLG 409
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEEA 162
+ + I + Y Q++ E + A NA+++ ++K+G + +
Sbjct: 410 DTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDG 469
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS--WT-VMITGY---- 215
T+L+E M R++IS+ A L G G D+ + +M + + +T + I G
Sbjct: 470 TKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCL 529
Query: 216 --VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
V R A + ++ D N FV TA+I + K LE+A + F R+ +D ++
Sbjct: 530 FDVHYGRQVHAHIIKNQL---DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWT 586
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+I YAQ E+AL F M + ++P++ TL + CS+L L G+Q H +V ++
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKS 646
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G +++ V +A++ MY++CG + ++E F + + ++WNTII +AQ+G KAL F
Sbjct: 647 GHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAF 706
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
M G PDG+TF +LSAC H G V E + F M + +GI P+ +H C+VDIL R
Sbjct: 707 RMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGR 766
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
G+ ++ Q M + +W ++L A ++ N+ LGE AA K+ EL P+ + Y++L
Sbjct: 767 VGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILL 826
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SN++A G W DV RVR LM +GV K+ SW+E +VH F+ D SHP I +IHL+L
Sbjct: 827 SNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKL 886
Query: 574 KRASVQMKSV 583
++ S+
Sbjct: 887 DELDRELASI 896
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 215/447 (48%), Gaps = 16/447 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
+FV +A + ++ G+I A ++F M ++ +TWN ++ GY Q G + LF SM
Sbjct: 248 LFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMME 307
Query: 108 -PVK-NIVSWNCMIAGCIDNDRIDDA----FDYFQAMPERNTATYNAMISGFLKHGRLEE 161
VK N + ++ GC ++ + + E N ++ + K G +
Sbjct: 308 LDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAID 367
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK---- 217
A +F+ + + +++ ++A++ ++G+ +++ L M + + I +
Sbjct: 368 AIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATN 427
Query: 218 --NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
N ++ ++ ++ +V V A++T + K G + + L+E + +D +S+NA
Sbjct: 428 TGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAY 487
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
++G G+ + L +F M++ P+ T +S+ +CS L ++ GRQ H +I+N
Sbjct: 488 LSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQL 547
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ N VC A+I MY++C + D+++AF ++ +L +W II +AQ EKAL +F Q
Sbjct: 548 DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQ 607
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G P+ T LS C + L ++ K G + + LVD+ ++ G
Sbjct: 608 MQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKS-GHVSDMFVGSALVDMYAKCG 666
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
+E+A + + + DT W +++
Sbjct: 667 CMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 181/361 (50%), Gaps = 14/361 (3%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
AR + +M +DV++W A+I G GF +S LFQ M + I+ +A + +
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSL 225
Query: 129 DDAFDYFQAMPER--------NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
A D + M + + +A++ + K G +E A+++F MP +N +++ +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK---NERFCEARELFYRM---PDY 234
L+G+ ++G+V L M +V +T +K N + + ++ + + Y
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY 345
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ N F+ ++ + K G+ +A +F+ I+ D V ++A+I Q G +EE+++LF
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M D P+ T+ S+ +A + L G+ H V + GFE +V+V NA++TMY + G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ D + + +L+SWN ++ G Y++ L F M GF P+ TF+S+L +
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 415 C 415
C
Sbjct: 526 C 526
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 162/327 (49%), Gaps = 8/327 (2%)
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
A + +MP R+V+S+TA++ G + +G + + L M + ++ + +K
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSL 225
Query: 222 CEARELFYRMPDYD------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
C A +L +M ++FV +A++ + K G +E A +F + ++ V++N +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
+ GYAQ G L+LF M+++D++ ++ TL +V C+ + L +G+ H L+I+ G+
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY 345
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E N + ++ MYS+CG +D+ F+ I P++V W+ +I Q G E+++ F
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M L P+ T SLLSA + G + + + K YG LV + + G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK-YGFETDVAVSNALVTMYMKNG 464
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
+ ++ + M + D W + L+
Sbjct: 465 CVHDGTKLYESM-VDRDLISWNAYLSG 490
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
S+ C++ + L + H L++++ + + +++ +Y++C + L ++
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
++VSW +I G ++ F +M G P+ T + L AC ++ +
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
K+ G++ + LVD+ ++ G++E A ++ GMP + D W LL
Sbjct: 237 AQAFKL-GLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDV-TWNVLL 286
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A + ++ G + A LF+ + +D I WN II GY QNG ++ F+ M
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLD 711
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAM 138
+ I V++ +++ C +++ ++F +M
Sbjct: 712 EGISPDGVTFTGILSACSHQGLVEEGKEHFNSM 744
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 302/547 (55%), Gaps = 18/547 (3%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV---- 109
N I + + G++ AA +LF+ M K++I+W +++GY QN +E+ LF SM
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEATRL 165
++ + + ++ C + +A ++ N++I + K L +A ++
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 166 FEQMPRRNVISYTAMLDGFMKKG---EVDKARALSDYMSFK----NVVSWTVMITGYVKN 218
F+ +V+ + AM++G+ + G E+ +A + M F+ +++++ ++
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
Query: 219 ERFCEARELFYRMPDYDKN--VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
++++ M Y N +F +A+I + L+++RL+F+ ++ KD V +N+M
Sbjct: 468 TSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
AGY Q EEAL LF + +PD+ T ++ TA L + G++ H +++ G E
Sbjct: 528 AGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
N + NA++ MY++CG D+ AF S ++V WN++I+++A HG +KAL +M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G +P+ ITF+ +LSAC HAG V + + FELM++ +GI P +EHY C+V +L RAG+
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGR 706
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
L KA ++ + MP + VW SLL+ C NVEL E AA+ DP++S + MLSN+
Sbjct: 707 LNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNI 766
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
YA+ GMW + +VR MK +GV K+ SWI I +VH FL D SH ++I+ L
Sbjct: 767 YASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Query: 577 SVQMKSV 583
VQ++ V
Sbjct: 827 LVQIRGV 833
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 205/456 (44%), Gaps = 53/456 (11%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D N +I Y + G + ++ +F+ MP +N+VSW+ M++ C + +++ F
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 140 ERNTATYNAMI--------SGFLKHGR---LEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ N I SG GR + + L + R+V T ++D ++K G
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD--------- 233
+D AR + D + K+ V+WT MI+G VK R + +LFY++ PD
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
Query: 234 ----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ + ++ +I + K G + A LF + K+ +S
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ +++GY QN + +EA+ LF+ M K ++PD S+ T+C++L L G Q H I
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG---HYEK 388
+ + V N++I MY++C + D+ F + ++V +N +I +++ G +
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE 437
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL F M P +TF+SLL A + S + LM K YG+ + L+
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALI 496
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
D+ S L+ + + M + D +W S+ A V
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYV 531
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 210/450 (46%), Gaps = 19/450 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V I + G I AR +FD + K +TW +I+G + G S LF +
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEE 161
N+V +++ + I + + + E + + N +I ++K GR+
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 162 ATRLFEQMPRRNVISYTAMLDGF----MKKGEVDKARALSDYMSFKNVVSWTVMIT--GY 215
A +LF MP +N+IS+T +L G+ + K ++ ++S + ++ + + ++T
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ F + + + +V ++I + K L +AR +F+ D V FNAM
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 276 IAGYAQNGVA---EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
I GY++ G EAL +F M ++P T VS+ A ++L L +Q H L+ +
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
G ++ +A+I +YS C + DS L F ++ +LV WN++ A + Q E+AL
Sbjct: 483 YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNL 542
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F ++ L+ PD TF ++++A G+ V + ++K G+ + L+D+ +
Sbjct: 543 FLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK-RGLECNPYITNALLDMYA 601
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ G E A + D W S++++
Sbjct: 602 KCGSPEDAHKAFDSAA-SRDVVCWNSVISS 630
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 153/286 (53%), Gaps = 9/286 (3%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA------ 193
E +T N +I+ + + G + A ++FE+MP RN++S++ M+ G +++
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 194 --RALSDYMSFKNVVSWTVMITGYVKNERFCEAR-ELFYRMPDYDKNVFVVTAMITGFCK 250
R D + + S+ +G R+ + + F +D++V+V T +I + K
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G ++ ARL+F+ + K V++ MI+G + G + +L+LF +++ ++ PD L +V
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
+ACS L L G+Q H ++R G E + S+ N +I Y +CG ++ + F + + N+
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+SW T+++ + Q+ +++A+ F+ M G PD S+L++C
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 137/337 (40%), Gaps = 56/337 (16%)
Query: 14 RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRAGKISA 68
R++ P +L +S + + T + I +Y +F +A I S +
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVSWNCMIAGC 122
+R +FD+M KD++ WN++ GY Q +E+ NLF + P + + AG
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 123 IDNDRIDDAF--DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
+ + ++ F + E N NA++ + K G E+A + F+ R+V+ + ++
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 181 LDGFMKKGEVDKARAL----------SDYMSFKNVVS----------------------- 207
+ + GE KA + +Y++F V+S
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGI 687
Query: 208 ------WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
+ M++ + R +AREL +MP + V ++++G K G +E A
Sbjct: 688 EPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAI-VWRSLLSGCAKAGNVELAEHAA 746
Query: 262 ERI---QPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
E PKD SF + YA G+ EA ++ M
Sbjct: 747 EMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM 783
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
LL+ H +I G E + + N +I +YSR GG++ + F ++ NLVSW+T+++
Sbjct: 59 LLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVS 118
Query: 379 AFAQHGHYEKALIFFSQMGLNGFD-PDGITFLSLLSAC-GHAGKVNESMDLFELMVKVYG 436
A HG YE++L+ F + D P+ S + AC G G+ + + + G
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSG 178
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
T L+D + G ++ A + +P E T W ++++ CV
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCV 225
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 257/442 (58%), Gaps = 10/442 (2%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA------ 193
E +T T N +++ + K G + A ++F+++P R+++S+ M+ ++ GE +KA
Sbjct: 30 ETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQNGEEEKAIDIFLE 89
Query: 194 --RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
R S F VS V + FC F D +VFV TA+I + K
Sbjct: 90 MQREGSPCSEF--TVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDVYAKC 147
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G +E+A +FE + ++ V++++++AG+ QN + EE L LF+ +M ++ + + SV
Sbjct: 148 GSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMISSVI 207
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
AC+ L L EGRQ H +V R GF N V +A++ MY++CG I ++ + F I N+V
Sbjct: 208 RACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVV 267
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
WN II+ FA+H + + F +M G PD +T++++LSAC H G V++ F+LM
Sbjct: 268 LWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLM 327
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
+ + + P+ HY+C+VDIL R G + +A ++ MPF A +WGSLLA+C I+ N+EL
Sbjct: 328 TREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASMWGSLLASCRIHGNLEL 387
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
E+AAK + E++P YV+L+N YAA+ W + + R +K + K+ SWIEI +
Sbjct: 388 AEIAAKNLFEMEPDRGGNYVLLANTYAASKKWEEAAKARKSLKGSEILKERGKSWIEIKD 447
Query: 552 KVHYFLGGDMSHPCIDKIHLEL 573
KVH F+ G+ +HP I I+LEL
Sbjct: 448 KVHTFMAGERTHPRITDIYLEL 469
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 176/372 (47%), Gaps = 49/372 (13%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D +T N ++ Y + G ++ + +F +P +++VSWN MI C+ N + A D F M
Sbjct: 32 DTLTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQNGEEEKAIDIFLEMQ 91
Query: 140 ERNTA----TYNAMISGFLKHGRLEEATRL----FEQMPRRNVISYTAMLDGFMKKGEVD 191
+ T ++++ G + +L + + +V TA++D + K G ++
Sbjct: 92 REGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIE 151
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD------------------ 233
A + + M +N V+W+ ++ G+V+NE + E LF R +
Sbjct: 152 DASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMISSVIRACA 211
Query: 234 -------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+ N FV +A++ + K G +E A +LF I+ K+ V +NA
Sbjct: 212 GLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNA 271
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR-N 333
+I+G+A++ + E + LF M + MQPD+ T V+V +AC + L+++GR L+ R +
Sbjct: 272 IISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREH 331
Query: 334 GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
NV + ++ + R G + ++ EL + + W +++A+ HG+ E A I
Sbjct: 332 NVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASMWGSLLASCRIHGNLELAEI- 390
Query: 393 FSQMGLNGFDPD 404
+ L +PD
Sbjct: 391 -AAKNLFEMEPD 401
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+ H VIR G E + N ++ MYS+CG I + F +I ++VSWN +I Q
Sbjct: 17 GKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQ 76
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+G EKA+ F +M G T S++ AC G V L +K + ++
Sbjct: 77 NGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKA---VVDAD 133
Query: 443 HY--TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
+ T L+D+ ++ G +E A + +GMP D W S++A V N E G + + +
Sbjct: 134 VFVGTALIDVYAKCGSIEDASCVFEGMPERNDV-TWSSIVAGFVQNELYEEGLVLFARGK 192
Query: 501 ELDPQNSAVYVMLSNLYAAAGM 522
E+ +N+ +++ S + A AG+
Sbjct: 193 EMGLENNQ-FMISSVIRACAGL 213
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 64/298 (21%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF---QS 106
VFV A I ++ G I A +F+ M ++ +TW++I+ G+ QN +E LF +
Sbjct: 134 VFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKE 193
Query: 107 MPVKN-------IVSWNCMIAGCIDNDR-----------------------------IDD 130
M ++N ++ +A I+ + I++
Sbjct: 194 MGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEE 253
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMK 186
A+ F + ++N +NA+ISGF KH E LFE+M + + ++Y A+L +
Sbjct: 254 AYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVH 313
Query: 187 KGEVDKARALSDYMSFK-----NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
G VDK R+ D M+ + NV+ ++ M+ + EA EL +MP F
Sbjct: 314 VGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMP------FAA 367
Query: 242 TAMITG----FCKV-GMLENARL----LFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
TA + G C++ G LE A + LFE ++P ++ + YA + EEA +
Sbjct: 368 TASMWGSLLASCRIHGNLELAEIAAKNLFE-MEPDRGGNYVLLANTYAASKKWEEAAK 424
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 280/497 (56%), Gaps = 13/497 (2%)
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG 152
Q G L NL+ + + C G ++ RI A + + N +++
Sbjct: 79 QRGSLVPDYNLYSKLLKE------CTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNM 132
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF----KNVVSW 208
+ K G L++A R+F++MP ++++++TA++ GF + A L M N +
Sbjct: 133 YAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTL 192
Query: 209 TVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
+ ++ +L F Y +V+V +A++ + + G ++ A+L F+ +
Sbjct: 193 SSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPT 252
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K VS+NA+I+G+A+ G E AL L M + + QP T SVF+AC+++ L +G+
Sbjct: 253 KSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWV 312
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H +I++G + + N ++ MY++ G I D++ F ++ P++VSWNT++ AQHG
Sbjct: 313 HAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLG 372
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++ L F QM G +P+ I+FL +L+AC H+G ++E + FELM K Y + P HY
Sbjct: 373 KETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVT 431
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
VD+L R G L++A + + MP E VWG+LL AC ++ N+ELG AA++ ELDP +
Sbjct: 432 FVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHD 491
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
S ++LSN+YA+AG WRDV +VR +MKE GV KQ A SW+EI N VH F+ D +HP I
Sbjct: 492 SGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQI 551
Query: 567 DKIHLELKRASVQMKSV 583
+I + + S ++K +
Sbjct: 552 KEIRGKWEEISGKIKEI 568
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 165/371 (44%), Gaps = 48/371 (12%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G+I A + ++ N I+ Y + G L +++ +F MP K++V+W +IAG
Sbjct: 106 GRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFS 165
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLK-----HGRLEEATRL----FEQMPRRNV 174
N+R DA F M + +S LK HG L+ T+L + + +V
Sbjct: 166 QNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHG-LDPGTQLHAFCLKYGYQSSV 224
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
+A++D + + G +D A+ D M K+ VSW +I+G+ + A L ++M
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284
Query: 235 D--------KNVFVVTAMITG-----------------------------FCKVGMLENA 257
+ +VF A I + K G +++A
Sbjct: 285 NFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
+ +F+R+ D VS+N M+ G AQ+G+ +E L F M+++ ++P++ + + V TACS
Sbjct: 345 KRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHS 404
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTI 376
LL+EG L+ + E +V + + R G + +E R++ P W +
Sbjct: 405 GLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGAL 464
Query: 377 IAAFAQHGHYE 387
+ A H + E
Sbjct: 465 LGACRMHKNME 475
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 136/325 (41%), Gaps = 56/325 (17%)
Query: 15 ILFPPILRILSTPD---------SCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISAL 60
+LFP +LR+ P+ + G+ + F +Y V+V +A +
Sbjct: 175 LLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMY 234
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA 120
+R G + AA+ FD M TK ++WNA+I+G+ + G + + +L M KN
Sbjct: 235 ARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN--------- 285
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR--NVISY- 177
FQ TY+++ S G LE+ + M + +I++
Sbjct: 286 --------------FQP----THFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFI 327
Query: 178 -TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDY 234
+LD + K G +D A+ + D + +VVSW M+TG ++ E + F +M
Sbjct: 328 GNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGI 387
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFE-----RIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+ N ++T G+L+ FE +++P D + + + G+ + A
Sbjct: 388 EPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEP-DVPHYVTFVDLLGRVGLLDRAE 446
Query: 290 RLFSGMIKMDMQPDDATLVSVFTAC 314
R +M ++P A ++ AC
Sbjct: 447 RFIR---EMPIEPTAAVWGALLGAC 468
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 179/535 (33%), Positives = 280/535 (52%), Gaps = 45/535 (8%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE---- 140
N+++ Y + G L +++ +F M +N+VSWN +I+ +N D F F M E
Sbjct: 49 NSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETK 108
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARAL 196
N +TY + L LE ++ R N TA+ + ++K G ++ A +
Sbjct: 109 PNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELV 168
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP----DYDKNVF------------- 239
+ MS KN V+WT ++ GY + ER +A LF +M + D+ VF
Sbjct: 169 FEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEEL 228
Query: 240 --------------------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
V T ++ + K LE+A FE I + VS++A+I GY
Sbjct: 229 NFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGY 288
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
Q G EEAL+ F + + + T S+F ACSAL N G Q+H I++ A
Sbjct: 289 CQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQ 348
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
+A+ITMYSRCG + + F I P+ V+W IIA +A G+ +AL F +M
Sbjct: 349 HGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDC 408
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
G P+ +TF+++L+AC H+G V E E M YG+ + +HY C+VDI SRAG L++
Sbjct: 409 GVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQE 468
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
A ++ + MPF D W LL C N+E+GELAA+ + +LDP+++A Y+++ NLYA+
Sbjct: 469 ALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYAS 528
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
G W++ VR +M E+ + K+ + SWI + KVH F+ GD HP ++I+ +L+
Sbjct: 529 FGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLE 583
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 118/298 (39%), Gaps = 49/298 (16%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
NF +++L V V + + + +A + F+ ++ + ++W+A+ITGY
Sbjct: 229 NFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGY 288
Query: 92 WQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY- 146
Q G +E+ F+S+ + N ++ + C + + + Y
Sbjct: 289 CQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQ 348
Query: 147 ---NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
+AMI+ + + GRL+ ATR+FE + + +++TA++ G+ +G
Sbjct: 349 HGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAP------------ 396
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLF 261
EA +LF RM D N A++T G++ R
Sbjct: 397 -------------------EALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYL 437
Query: 262 ERIQPKDCVS-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E + V+ ++ M+ Y++ G +EAL L M PD + + C
Sbjct: 438 ESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIR---SMPFSPDAMSWKCLLGGC 492
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 226/350 (64%), Gaps = 1/350 (0%)
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+Y K+ V TA++ + K G ++ A +F+RI+ KD V+++AMI GYAQ G E A+R+F
Sbjct: 36 NYVKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIF 95
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQL-LNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
M K ++P++ T + AC+A + +G+Q H I++ F + V +A++TMYS+
Sbjct: 96 VQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSK 155
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G I + F++ +LVSWN+II+ +AQHG+ KAL F +M + DG+TF+ +
Sbjct: 156 RGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGV 215
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+SAC H G NE F++MVK + I P EHY+C+VD+ RAG L KA +I MPF A
Sbjct: 216 ISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPA 275
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
VW +LLAA I+ N+E+G+LAA K+ L PQN A YV+L+N+YA+ G W++ +VR
Sbjct: 276 SANVWRTLLAASCIHRNLEVGKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRK 335
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
LM+E+ V K YSWIE+ NK + FL GD+SHP ++I+ +L+ S Q+K
Sbjct: 336 LMEEKKVKKVAGYSWIEVKNKTYTFLAGDVSHPLSNQIYAKLEELSCQLK 385
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 137/281 (48%), Gaps = 26/281 (9%)
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
VK+ ++ + +D+A FQ + E++ ++AMI G+ + G E A R+F Q
Sbjct: 38 VKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQ 97
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
M + + K E +F +++ T V+ + A +
Sbjct: 98 MAKEKI-----------KPNE----------YTFSGIINACAAPTAGVEQGKQLHAWSIK 136
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
R ++ + V +A++T + K G +E+A +F+R + +D VS+N++I+GYAQ+G +A
Sbjct: 137 SR---FNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKA 193
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVIT 347
L +F M + +++ D T + V +AC+ L NEG R ++V + E + + ++
Sbjct: 194 LEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVD 253
Query: 348 MYSRCGGILDSELAFRQIHSPNLVS-WNTIIAAFAQHGHYE 387
+Y R G ++ + ++ P + W T++AA H + E
Sbjct: 254 LYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLE 294
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 122/292 (41%), Gaps = 53/292 (18%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V A + A + G + A ++F ++ KD++ W+A+I GY Q G + + +F M +
Sbjct: 43 VGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEK 102
Query: 112 IVSWNCMIAGCID----------------------------------------NDRIDDA 131
I +G I+ I+ A
Sbjct: 103 IKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESA 162
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKK 187
F+ F+ ER+ ++N++ISG+ +HG +A +FE+M R+N+ +++ ++
Sbjct: 163 FEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHT 222
Query: 188 GEVDKARALSDYMSFKNVVS-----WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
G ++ + D M + + ++ M+ Y + +A E+ MP + + V
Sbjct: 223 GLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMP-FPASANVWR 281
Query: 243 AMITGFCKVGMLENARLLFER---IQPKDCVSFNAMIAGYAQNGVAEEALRL 291
++ C LE +L ++ +QP++ S+ + YA G +E ++
Sbjct: 282 TLLAASCIHRNLEVGKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKV 333
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + ++P+D T ++ TA + + H I+ + + SV A++ Y + G
Sbjct: 1 MSREGIKPNDFTYSTILTAQPGVSPF----EMHAQAIKRNYVKSPSVGTALLDAYVKRGN 56
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ ++ F++I ++V+W+ +I +AQ G E A+ F QM P+ TF +++A
Sbjct: 57 VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116
Query: 415 C-GHAGKVNESMDLFELMVKVY---GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
C V + L +K + SS L+ + S+ G +E A+++ + E
Sbjct: 117 CAAPTAGVEQGKQLHAWSIKSRFNNALCVSS----ALLTMYSKRGDIESAFEVFKRQR-E 171
Query: 471 ADTGVWGSLLAA 482
D W S+++
Sbjct: 172 RDLVSWNSIISG 183
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 289/550 (52%), Gaps = 20/550 (3%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ + S+ G A +F + D++ W+A+IT Q G +ES LF M +
Sbjct: 350 FIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLG 409
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEEA 162
+ + I + Y Q++ E + A NA+++ ++K+G + +
Sbjct: 410 DTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDG 469
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS--WT-VMITGY---- 215
T+L+E M R++IS+ A L G G D+ + +M + + +T + I G
Sbjct: 470 TKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCL 529
Query: 216 --VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
V R A + ++ D N FV TA+I + K LE+A + F R+ +D ++
Sbjct: 530 FDVHYGRQVHAHIIKNQL---DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWT 586
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+I YAQ E+AL F M + ++P++ TL + CS+L L G+Q H +V ++
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKS 646
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G +++ V +A++ MY++CG + ++E F + + ++WNTII +AQ+G KAL F
Sbjct: 647 GHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAF 706
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
M G PDG+TF +LSAC H G V E + F M + +GI P+ +H C+VDIL R
Sbjct: 707 RMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGR 766
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
G+ ++ Q M + +W ++L A ++ N+ LGE AA K+ EL P+ + Y++L
Sbjct: 767 VGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILL 826
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SN++A G W DV RVR LM +GV K+ SW+E +VH F+ D SHP I +IHL+L
Sbjct: 827 SNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKL 886
Query: 574 KRASVQMKSV 583
++ S+
Sbjct: 887 DELDRELASI 896
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 215/447 (48%), Gaps = 16/447 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
+FV +A + ++ G+I A ++F M ++ +TWN ++ GY Q G + LF SM
Sbjct: 248 LFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMME 307
Query: 108 -PVK-NIVSWNCMIAGCIDNDRIDDA----FDYFQAMPERNTATYNAMISGFLKHGRLEE 161
VK N + ++ GC ++ + + E N ++ + K G +
Sbjct: 308 LDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAID 367
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK---- 217
A +F+ + + +++ ++A++ ++G+ +++ L M + + I +
Sbjct: 368 AIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATN 427
Query: 218 --NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
N ++ ++ ++ +V V A++T + K G + + L+E + +D +S+NA
Sbjct: 428 TGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAY 487
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
++G G+ + L +F M++ P+ T +S+ +CS L ++ GRQ H +I+N
Sbjct: 488 LSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQL 547
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ N VC A+I MY++C + D+++AF ++ +L +W II +AQ EKAL +F Q
Sbjct: 548 DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQ 607
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G P+ T LS C + L ++ K G + + LVD+ ++ G
Sbjct: 608 MQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKS-GHVSDMFVGSALVDMYAKCG 666
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
+E+A + + + DT W +++
Sbjct: 667 CMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 181/361 (50%), Gaps = 14/361 (3%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
AR + +M +DV++W A+I G GF +S LFQ M + I+ +A + +
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSL 225
Query: 129 DDAFDYFQAMPER--------NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
A D + M + + +A++ + K G +E A+++F MP +N +++ +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK---NERFCEARELFYRM---PDY 234
L+G+ ++G+V L M +V +T +K N + + ++ + + Y
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY 345
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ N F+ ++ + K G+ +A +F+ I+ D V ++A+I Q G +EE+++LF
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M D P+ T+ S+ +A + L G+ H V + GFE +V+V NA++TMY + G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ D + + +L+SWN ++ G Y++ L F M GF P+ TF+S+L +
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 415 C 415
C
Sbjct: 526 C 526
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 162/327 (49%), Gaps = 8/327 (2%)
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
A + +MP R+V+S+TA++ G + +G + + L M + ++ + +K
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSL 225
Query: 222 CEARELFYRMPDYD------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
C A +L +M ++FV +A++ + K G +E A +F + ++ V++N +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
+ GYAQ G L+LF M+++D++ ++ TL +V C+ + L +G+ H L+I+ G+
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY 345
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E N + ++ MYS+CG +D+ F+ I P++V W+ +I Q G E+++ F
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M L P+ T SLLSA + G + + + K YG LV + + G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK-YGFETDVAVSNALVTMYMKNG 464
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
+ ++ + M + D W + L+
Sbjct: 465 CVHDGTKLYESM-VDRDLISWNAYLSG 490
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
S+ C++ + L + H L++++ + + +++ +Y++C + L ++
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
++VSW +I G ++ F +M G P+ T + L AC ++ +
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
K+ G++ + LVD+ ++ G++E A ++ GMP + D W LL
Sbjct: 237 AQAFKL-GLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDV-TWNVLL 286
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A + ++ G + A LF+ + +D I WN II GY QNG ++ F+ M
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLD 711
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAM 138
+ I V++ +++ C +++ ++F +M
Sbjct: 712 EGISPDGVTFTGILSACSHQGLVEEGKEHFNSM 744
>gi|356504050|ref|XP_003520812.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Glycine max]
Length = 753
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 272/497 (54%), Gaps = 37/497 (7%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI 150
Y + G LQ++ LF MPVK+ VSWN +I+G + N D F M ERN T+ A+I
Sbjct: 2 YSKCGKLQDAIKLFDHMPVKDTVSWNAIISGFLRNRDCDTGRQVFDEMLERNVVTWTAVI 61
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
SG ++ E+ RLF+QM RR +S N +++
Sbjct: 62 SGLAQNEFYEDGLRLFDQM-RRGSVS--------------------------PNSLTYLS 94
Query: 211 MITGYVKNERFCEARE---LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ + E R+ L +++ ++ + +A++ + K G LE A +FE +
Sbjct: 95 ALMACSGLQALLEGRKIHGLLWKL-GMQSDLCIESALMDLYSKCGSLEEAWEIFESAEEL 153
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD---ATLVSVFTACSALQLLNEGR 324
D VS ++ + QNG+ EEA+++F M+K+ ++ D + ++ VF ++L L G+
Sbjct: 154 DDVSLTVILVAFMQNGLEEEAIQIFMRMVKLGIEVDPNMVSAILGVFGVGTSLTL---GK 210
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H L+I+ F N+ V N +I MYS+CG + DS F ++ N VSWN++IAA+A++G
Sbjct: 211 QIHSLIIKKNFIQNLFVSNGLINMYSKCGDLYDSLQVFHEMTQKNSVSWNSVIAAYARYG 270
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
+AL F+ M + G +TFLSLL AC HAG V + M+ E M + +G+ P SEHY
Sbjct: 271 DGFRALQFYDDMRVEGIALTDVTFLSLLHACSHAGLVEKGMEFLESMTRDHGLSPRSEHY 330
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
C+VD+L RAG L++A + +G+P VW +LL AC I+ + E+G+ AA ++ P
Sbjct: 331 ACVVDMLGRAGLLKEAKKFIEGLPENPGVLVWQALLGACSIHGDSEMGKYAANQLFLATP 390
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
+ A YV+++N+Y++ G W++ R MKE GV K+ SW+EI KV+ F+ GD HP
Sbjct: 391 DSPAPYVLMANIYSSEGKWKERARSIKKMKEMGVAKEVGISWVEIEKKVNSFVVGDKMHP 450
Query: 565 CIDKIHLELKRASVQMK 581
D I L R +K
Sbjct: 451 QADAIFWLLSRLLKHLK 467
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 161/354 (45%), Gaps = 24/354 (6%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----V 109
NA IS R RQ+FD+M ++V+TW A+I+G QN F ++ LF M
Sbjct: 27 NAIISGFLRNRDCDTGRQVFDEMLERNVVTWTAVISGLAQNEFYEDGLRLFDQMRRGSVS 86
Query: 110 KNIVSWNCMIAGC------IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEAT 163
N +++ + C ++ +I ++ + + +A++ + K G LEEA
Sbjct: 87 PNSLTYLSALMACSGLQALLEGRKIHGLL--WKLGMQSDLCIESALMDLYSKCGSLEEAW 144
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF--------KNVVSWTVMITGY 215
+FE + +S T +L FM+ G ++ A+ +M N+VS + + G
Sbjct: 145 EIFESAEELDDVSLTVILVAFMQNGLEEE--AIQIFMRMVKLGIEVDPNMVSAILGVFGV 202
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ + ++ +N+FV +I + K G L ++ +F + K+ VS+N++
Sbjct: 203 GTSLTLGKQIHSLIIKKNFIQNLFVSNGLINMYSKCGDLYDSLQVFHEMTQKNSVSWNSV 262
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-G 334
IA YA+ G AL+ + M + D T +S+ ACS L+ +G + + R+ G
Sbjct: 263 IAAYARYGDGFRALQFYDDMRVEGIALTDVTFLSLLHACSHAGLVEKGMEFLESMTRDHG 322
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYE 387
V+ M R G + +++ + +P ++ W ++ A + HG E
Sbjct: 323 LSPRSEHYACVVDMLGRAGLLKEAKKFIEGLPENPGVLVWQALLGACSIHGDSE 376
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 32/147 (21%)
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF--------------------------- 380
MYS+CG + D+ F + + VSWN II+ F
Sbjct: 1 MYSKCGKLQDAIKLFDHMPVKDTVSWNAIISGFLRNRDCDTGRQVFDEMLERNVVTWTAV 60
Query: 381 ----AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
AQ+ YE L F QM P+ +T+LS L AC + E + L+ K+ G
Sbjct: 61 ISGLAQNEFYEDGLRLFDQMRRGSVSPNSLTYLSALMACSGLQALLEGRKIHGLLWKL-G 119
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ + L+D+ S+ G LE+AW+I
Sbjct: 120 MQSDLCIESALMDLYSKCGSLEEAWEI 146
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q +FV+N I+ S+ G + + Q+F +MT K+ ++WN++I Y + G + + M
Sbjct: 223 QNLFVSNGLINMYSKCGDLYDSLQVFHEMTQKNSVSWNSVIAAYARYGDGFRALQFYDDM 282
Query: 108 PVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERN-----TATYNAMISGFLKHGR 158
V+ I V++ ++ C ++ ++ ++M + + Y ++ + G
Sbjct: 283 RVEGIALTDVTFLSLLHACSHAGLVEKGMEFLESMTRDHGLSPRSEHYACVVDMLGRAGL 342
Query: 159 LEEATRLFEQMPRR-NVISYTAML 181
L+EA + E +P V+ + A+L
Sbjct: 343 LKEAKKFIEGLPENPGVLVWQALL 366
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 255/459 (55%), Gaps = 39/459 (8%)
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
+ ++IS ++++GRLE+A ++F+Q R+V+SYTA++ G+ KG + A+ + D + K+
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 184
Query: 205 VVSWTVMITGYVKNERFCEARELFYRM------PD------------------------- 233
VVSW MI+GY + EA ELF M PD
Sbjct: 185 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 244
Query: 234 ------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
+ N+ +V A+I + K G +E A LFE + KD +S+N +I GY + +E
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKE 304
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR--NGFEANVSVCNAV 345
AL LF M++ P+D T++S+ AC+ L + GR HV + + G S ++
Sbjct: 305 ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSL 364
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I MY++CG I ++ F I + +L SWN +I FA HG A FS+M N +PD
Sbjct: 365 IDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 424
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
ITF+ LLSAC H+G ++ +F M + Y I P EHY C++D+L +G ++A ++
Sbjct: 425 ITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMIN 484
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
M E D +W SLL AC ++ NVELGE A+ + +++P+N YV+LSN+YA AG W +
Sbjct: 485 TMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNE 544
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
V ++R L+ ++G+ K S IEI + VH F+ GD HP
Sbjct: 545 VAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 583
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 217/462 (46%), Gaps = 84/462 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ + IS + G++ AR++FDQ + +DV+++ A+ITGY G++ ++ +F +P+
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
K++VSWN MI+G + +A + F+ M + N +T +++S + +E ++
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242
Query: 166 FEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ A++D ++K GEV+ A L + +S+K+V+SW +I GY +
Sbjct: 243 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302
Query: 222 CEARELFYRM------PDYDKNVFVV---------------------------------- 241
EA LF M P+ D + +
Sbjct: 303 KEALLLFQEMLRSGESPN-DVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 361
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
T++I + K G +E A+ +F+ I + S+NAMI G+A +G A A +FS M K +++
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PDD T V + +ACS +L+ GR + R+ E D ++
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRH----IFRSMKE--------------------DYKI- 456
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
+P L + +I G +++A + M + +PDG+ + SLL AC G V
Sbjct: 457 -----TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM---EPDGVIWCSLLKACKMHGNV 508
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ ++K+ P S Y L +I + AG+ + +I
Sbjct: 509 ELGESYAQNLIKIEPKNPGS--YVLLSNIYATAGRWNEVAKI 548
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 175/345 (50%), Gaps = 42/345 (12%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS------FKNVVSWTVMI 212
L A +FE + N++ + M G D AL Y+ N ++ ++
Sbjct: 38 LPYAISVFETIQEPNLLIWNTMFRGHALSS--DPVSALYLYVCMISLGLLPNCYTFPFLL 95
Query: 213 TGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
K++ F E +++ + YD +++V T++I+ + + G LE+AR +F++ +D V
Sbjct: 96 KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 155
Query: 271 SFNAM-------------------------------IAGYAQNGVAEEALRLFSGMIKMD 299
S+ A+ I+GYA+ G +EAL LF M+K +
Sbjct: 156 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 215
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++PD++T+VSV +AC+ + GRQ H + +GF +N+ + NA+I +Y +CG + +
Sbjct: 216 VRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 275
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + +++SWNT+I + Y++AL+ F +M +G P+ +T LS+L AC H G
Sbjct: 276 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 335
Query: 420 KVNESMDLFELMVK-VYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ + + K + G+ +S H T L+D+ ++ G +E A Q+
Sbjct: 336 AIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQV 380
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 36/295 (12%)
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+FE IQ + + +N M G+A + AL L+ MI + + P+ T + +C+ +
Sbjct: 44 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 103
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ--------------- 364
EG+Q H V++ G++ ++ V ++I+MY + G + D+ F Q
Sbjct: 104 FREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG 163
Query: 365 ----------------IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
I ++VSWN +I+ +A+ G+ ++AL F +M PD T
Sbjct: 164 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 223
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+S++SAC + + + + +G + + L+D+ + G++E A + +G+
Sbjct: 224 VSVVSACAQSASIELGRQVHS-WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLS 282
Query: 469 FEADTGVWGSLLAACV-INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
++ D W +L+ +NL E L + +R + N MLS L A A +
Sbjct: 283 YK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV--TMLSILPACAHL 334
>gi|119638460|gb|ABL85051.1| hypothetical protein 57h21.26 [Brachypodium sylvaticum]
Length = 753
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 168/511 (32%), Positives = 276/511 (54%), Gaps = 38/511 (7%)
Query: 42 IRLFSTQYVFVNNAKISA-----LSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF 96
I FS + FV++ I A + I AR FD+M K V +WNAII GY
Sbjct: 276 IHGFSVKSGFVHDLIIEASLVAMYCNSLDIDEARLEFDKMDRKQVGSWNAIIRGYIYAEK 335
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH 156
+ E++N+F+SM ++ VSWN MI G I + RI DA + + MPE+N A++S F+ +
Sbjct: 336 IDEAENIFESMTYRDKVSWNSMINGYIRDGRIADATELYSKMPEKNVEAATALMSWFIDN 395
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
G+L +A +F +P+ +V+S TA+L G+MK+G +D A L M + V++ VMI G++
Sbjct: 396 GKLGKARDMFYSLPQVDVMSCTALLFGYMKEGYLDDALDLFHRMHKRTAVTYNVMIAGFL 455
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
+ EA +LF P +D C F +
Sbjct: 456 HQGKVAEAYKLFNESPAHDATT------------------------------CSCF---V 482
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
G AQNG+ +AL+L+ M+ +M ++ + S+ + CS ++ G Q H I+ GFE
Sbjct: 483 TGLAQNGLIHDALKLYKKMLVSNMHTSESVVSSLISCCSHHSMIVHGLQLHATTIKLGFE 542
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ + N++I++YS+CG ++ ++ F Q+ ++V+WNT+I +A + + A+ F M
Sbjct: 543 LYLIIQNSLISLYSKCGEMVAAQNIFDQMVKRDVVTWNTLIHGYAFNSLGQNAIEMFKNM 602
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
+ DPD ITFL +LSAC H + E+ F++M YGI P+ HY C+VD+L R G
Sbjct: 603 KIAQVDPDEITFLGVLSACNHMSLLEEAKHFFDVMTCDYGIAPNMMHYACMVDLLCRRGM 662
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
+E+A + + MPFE D+ +W SLL++C ++ + +L E AA ++ ++P Y+ L N+
Sbjct: 663 VEEAEGLMKSMPFEPDSAIWTSLLSSCRLSGSDKLAEHAASQLIAINPCTKMPYLHLINV 722
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
+ + W + +R + K+ YSWI
Sbjct: 723 HGSMDKWAVIDSLRSQITRSTTEKEVGYSWI 753
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 143/609 (23%), Positives = 242/609 (39%), Gaps = 178/609 (29%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V N + A RAG+ AAR++FD M +DV++WN+ ++ + ++G + LF +
Sbjct: 25 VVSGNRLMGAHLRAGRPDAAREVFDGMPRRDVVSWNSAMSAHARSGAHAGAAGLFLELRR 84
Query: 110 KNI------------------------------------------VSWNCMIAGCIDNDR 127
+ + S M A C D
Sbjct: 85 RGVRPDGTSLSTVLSACARLEALELGRCVHGLALRSCSTGNVFVGASLVTMYASCGVVDC 144
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
++ FD + N A +NA++SG + + R+ +A R+F +MP RNV+S+TAM+ G +
Sbjct: 145 LERVFDDVDS---PNVALWNALVSGLVMNHRVGDARRVFNRMPARNVVSWTAMVKGHVSV 201
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF---YRMPDYDKNVFVV--- 241
+V +A L + M KN VSW VMI G V ++F EA ELF R D NV +V
Sbjct: 202 HDVGQAVELFNLMPVKNSVSWCVMIGGLVHCQQFREAVELFNSLMRNGDEVTNVILVKVV 261
Query: 242 -------------------------------TAMITGFCKVGMLENARL----------- 259
+++ +C ++ ARL
Sbjct: 262 NAYAGLKSIGGGRCIHGFSVKSGFVHDLIIEASLVAMYCNSLDIDEARLEFDKMDRKQVG 321
Query: 260 --------------------LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
+FE + +D VS+N+MI GY ++G +A L+S M + +
Sbjct: 322 SWNAIIRGYIYAEKIDEAENIFESMTYRDKVSWNSMINGYIRDGRIADATELYSKMPEKN 381
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF----EANVSVCNAVITMYSRCGGI 355
++ A L+S F ++ G+ R+ F + +V C A++ Y + G +
Sbjct: 382 VEAATA-LMSWF--------IDNGKLGKA---RDMFYSLPQVDVMSCTALLFGYMKEGYL 429
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ---------------MGLNG 400
D+ F ++H V++N +IA F G +A F++ + NG
Sbjct: 430 DDALDLFHRMHKRTAVTYNVMIAGFLHQGKVAEAYKLFNESPAHDATTCSCFVTGLAQNG 489
Query: 401 FDPDGITFL----------------SLLSACGHAGKVNESMDLFELMVK----VYGIIPS 440
D + SL+S C H + + L +K +Y II +
Sbjct: 490 LIHDALKLYKKMLVSNMHTSESVVSSLISCCSHHSMIVHGLQLHATTIKLGFELYLIIQN 549
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAK--- 497
S L+ + S+ G++ A I M + D W +L+ N LG+ A +
Sbjct: 550 S-----LISLYSKCGEMVAAQNIFDQM-VKRDVVTWNTLIHGYAFN---SLGQNAIEMFK 600
Query: 498 --KMRELDP 504
K+ ++DP
Sbjct: 601 NMKIAQVDP 609
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
D D V ++ + G + AR +F+ + +D VS+N+ ++ +A++G A LF
Sbjct: 20 DDDGGVVSGNRLMGAHLRAGRPDAAREVFDGMPRRDVVSWNSAMSAHARSGAHAGAAGLF 79
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ + ++PD +L +V +AC+ L+ L GR H L +R+ NV V +++TMY+ C
Sbjct: 80 LELRRRGVRPDGTSLSTVLSACARLEALELGRCVHGLALRSCSTGNVFVGASLVTMYASC 139
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + E F + SPN+ WN +++ + A F++M +++ +++
Sbjct: 140 GVVDCLERVFDDVDSPNVALWNALVSGLVMNHRVGDARRVFNRMPARNV----VSWTAMV 195
Query: 413 SACGHAGKVNESMDLFELM 431
V ++++LF LM
Sbjct: 196 KGHVSVHDVGQAVELFNLM 214
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 254/459 (55%), Gaps = 39/459 (8%)
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
+ ++IS ++++GRLE+A ++F+Q R+V+SYTA++ G+ KG + A+ + D + K+
Sbjct: 140 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 199
Query: 205 VVSWTVMITGYVKNERFCEARELFYRM------PD------------------------- 233
VVSW MI+GY + EA ELF M PD
Sbjct: 200 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 259
Query: 234 ------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
+ N+ +V A+I + K G +E A LFE + KD +S+N +I GY + +E
Sbjct: 260 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKE 319
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR--NGFEANVSVCNAV 345
AL LF M++ P+D T++S+ AC+ L + GR HV + + G S ++
Sbjct: 320 ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSL 379
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I MY++CG I ++ F I + +L SWN +I FA HG A FS+M N +PD
Sbjct: 380 IDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 439
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
ITF+ LLSAC H+G ++ +F M + Y I P EHY C++D+L +G ++A ++
Sbjct: 440 ITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMIN 499
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
M E D +W SLL AC + NVELGE A+ + +++P+N YV+LSN+YA AG W +
Sbjct: 500 TMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNE 559
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
V ++R L+ ++G+ K S IEI + VH F+ GD HP
Sbjct: 560 VAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 598
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 216/462 (46%), Gaps = 84/462 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ + IS + G++ AR++FDQ + +DV+++ A+ITGY G++ ++ +F +P+
Sbjct: 138 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 197
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
K++VSWN MI+G + +A + F+ M + N +T +++S + +E ++
Sbjct: 198 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 257
Query: 166 FEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ A++D ++K GEV+ A L + +S+K+V+SW +I GY +
Sbjct: 258 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 317
Query: 222 CEARELFYRM------PDYDKNVFVV---------------------------------- 241
EA LF M P+ D + +
Sbjct: 318 KEALLLFQEMLRSGESPN-DVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 376
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
T++I + K G +E A+ +F+ I + S+NAMI G+A +G A A +FS M K +++
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 436
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PDD T V + +ACS +L+ GR + R+ E D ++
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRH----IFRSMKE--------------------DYKI- 471
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
+P L + +I G +++A + M + +PDG+ + SLL AC V
Sbjct: 472 -----TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM---EPDGVIWCSLLKACKMYANV 523
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ ++K+ P S Y L +I + AG+ + +I
Sbjct: 524 ELGESYAQNLIKIEPKNPGS--YVLLSNIYATAGRWNEVAKI 563
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 175/345 (50%), Gaps = 42/345 (12%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS------FKNVVSWTVMI 212
L A +FE + N++ + M G D AL Y+ N ++ ++
Sbjct: 53 LPYAISVFETIQEPNLLIWNTMFRGHALSS--DPVSALYLYVCMISLGLLPNCYTFPFLL 110
Query: 213 TGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
K++ F E +++ + YD +++V T++I+ + + G LE+AR +F++ +D V
Sbjct: 111 KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 170
Query: 271 SFNAM-------------------------------IAGYAQNGVAEEALRLFSGMIKMD 299
S+ A+ I+GYA+ G +EAL LF M+K +
Sbjct: 171 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 230
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++PD++T+VSV +AC+ + GRQ H + +GF +N+ + NA+I +Y +CG + +
Sbjct: 231 VRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 290
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + +++SWNT+I + Y++AL+ F +M +G P+ +T LS+L AC H G
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 350
Query: 420 KVNESMDLFELMVK-VYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ + + K + G+ +S H T L+D+ ++ G +E A Q+
Sbjct: 351 AIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQV 395
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 36/295 (12%)
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+FE IQ + + +N M G+A + AL L+ MI + + P+ T + +C+ +
Sbjct: 59 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 118
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ--------------- 364
EG+Q H V++ G++ ++ V ++I+MY + G + D+ F Q
Sbjct: 119 FREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG 178
Query: 365 ----------------IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
I ++VSWN +I+ +A+ G+ ++AL F +M PD T
Sbjct: 179 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 238
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+S++SAC + + + + +G + + L+D+ + G++E A + +G+
Sbjct: 239 VSVVSACAQSASIELGRQVHS-WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLS 297
Query: 469 FEADTGVWGSLLAACV-INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
++ D W +L+ +NL E L + +R + N MLS L A A +
Sbjct: 298 YK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV--TMLSILPACAHL 349
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 246/397 (61%), Gaps = 2/397 (0%)
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKN-ERFCEARELFYRMPDYDKNVFVVTAMIT 246
G VD +R + + M NV+SWT +IT YV++ E EA ELF +M N V ++I+
Sbjct: 9 GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNC-VGNSLIS 67
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ + G +E+AR F+ + K+ VS+NA++ GYA+N +EEA LF+ + + T
Sbjct: 68 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 127
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
S+ + +++ + +G Q H +++ G+++N +CNA+I+MYSRCG I + F ++
Sbjct: 128 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 187
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
N++SW ++I FA+HG +AL F +M G P+ IT++++LSAC H G ++E
Sbjct: 188 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 247
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
F M K +GI+P EHY C+VD+L R+G L +A + MP AD VW +LL AC ++
Sbjct: 248 HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 307
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
N ELG AA+ + E +P + A Y++LSNL+A+AG W+DV ++R MKE+ + K+ SW
Sbjct: 308 GNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSW 367
Query: 547 IEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
IE+ N+VH F G+ SHP +I+ EL + + ++K +
Sbjct: 368 IEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEM 404
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 185/382 (48%), Gaps = 43/382 (11%)
Query: 94 NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRID-DAFDYFQAMPERNT-ATYNAMIS 151
+G + +S+ +F+ MP N++SW +I + + D +A + F M + N++IS
Sbjct: 8 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNCVGNSLIS 67
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VS 207
+ + GR+E+A + F+ + +N++SY A++DG+ K + ++A L + ++ + +
Sbjct: 68 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 127
Query: 208 WTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+ +++G + ++ R+ Y N + A+I+ + + G +E A +F ++
Sbjct: 128 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 187
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
++ +S+ +MI G+A++G A AL +F M++ +P++ T V+V +ACS + +++EG Q
Sbjct: 188 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG-Q 246
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H +MY G + P + + ++ + G
Sbjct: 247 KH-----------------FNSMYKEHGIV------------PRMEHYACMVDLLGRSGL 277
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+A+ F + M L D + + +LL AC G E++++ P++ Y
Sbjct: 278 LVEAMEFINSMPLMA---DALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAA--YI 332
Query: 446 CLVDILSRAGQLEKAWQITQGM 467
L ++ + AGQ + +I + M
Sbjct: 333 LLSNLHASAGQWKDVVKIRKSM 354
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 28/283 (9%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
++ S V N+ IS +R+G++ AR+ FD + K+++++NAI+ GY +N +E+
Sbjct: 52 KMISASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 111
Query: 103 LFQSMPVKNI----------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG 152
LF + I +S I ++I + + N NA+IS
Sbjct: 112 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL--LKGGYKSNQCICNALISM 169
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM----SFKNVVSW 208
+ + G +E A ++F +M RNVIS+T+M+ GF K G +A + M + N +++
Sbjct: 170 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 229
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ--- 265
+++ E ++ F M K +V M C V +L + LL E ++
Sbjct: 230 VAVLSACSHVGMISEGQKHFNSMY---KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 286
Query: 266 --P--KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
P D + + ++ +G E L + + ++ +PDD
Sbjct: 287 SMPLMADALVWRTLLGACRVHGNTE--LGRHAAEMILEQEPDD 327
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 288/523 (55%), Gaps = 34/523 (6%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----E 140
N ++ Y + G + +++ +F+ M V++ VSWN M++G N A + F+ M E
Sbjct: 1012 NELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLE 1071
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV--------------ISYTAMLDGFMK 186
N T+ +++S + G+ E LF +M R + + A +G +
Sbjct: 1072 PNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVI 1131
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
G V K +Y+ KN +I Y K+ AR LF + KN+ A+I+
Sbjct: 1132 HGYVVKG-GFENYLFVKNS-----LICLYGKHGNVNAARILFLEIKT--KNIVSWNALIS 1183
Query: 247 GFCKVGMLENARLLFERIQPKD--------CVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
+ +G + A +F +++ D VS++A+I G+A G EEAL LF M
Sbjct: 1184 SYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLA 1243
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++ + T+ SV + C+ L L+ GR+ H V+R+ + N+ V N +I MY++ G +
Sbjct: 1244 KVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEG 1303
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
L F +I + +L+SWNT++A + HG E A+ F QM +GF+PDG+TF+++LSAC HA
Sbjct: 1304 NLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHA 1363
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E +LF+ M+K + + P EHY C+VD+L RAG L++A ++ + MP E + VWG+
Sbjct: 1364 GLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGA 1423
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL +C ++ N E+ E A ++ L+ + + Y++LSN+YAA+G W D +VR+ K +G+
Sbjct: 1424 LLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGL 1483
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
K SWI++ KV+ F G+ H +++++ LK +QM+
Sbjct: 1484 KKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQME 1526
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 181/437 (41%), Gaps = 90/437 (20%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V N + + G++ AR++F++M + ++WN +++GY N + +F+ M
Sbjct: 1008 LHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGS 1067
Query: 110 ----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY------------------- 146
N+V+W +++ + + + F M R
Sbjct: 1068 AGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDE 1127
Query: 147 --------------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
N++I + KHG + A LF ++ +N++S+ A++ +
Sbjct: 1128 GKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYAD 1187
Query: 187 KGEVDKARAL-------SDY-MSFKNVVSWTVMITGYVKNERFCEARELFYRM------- 231
G D+A A+ +Y M NVVSW+ +I G+ + EA ELF RM
Sbjct: 1188 LGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKA 1247
Query: 232 ------------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLF 261
D N+ V +I + K G + L+F
Sbjct: 1248 NSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVF 1307
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
E+I+ KD +S+N M+AGY +G+ E A+R F MIK +PD T V+V +ACS L+
Sbjct: 1308 EKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVA 1367
Query: 322 EGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAA 379
EGR+ +I+ E + ++ + R G + ++ + + PN W ++ +
Sbjct: 1368 EGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNS 1427
Query: 380 FAQHGHYEKALIFFSQM 396
H + E A SQ+
Sbjct: 1428 CRMHKNTEVAEETASQI 1444
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 116/219 (52%), Gaps = 6/219 (2%)
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS----FNAMIAGYAQNGVAEEALRL 291
++ F+ +++ + G++ +A+ +FE + P +C S +N+++ +G EEAL +
Sbjct: 902 RSAFLAARVVSVYAGFGLVSDAQRVFE-VSPIECFSNLLLWNSILRANVAHGYCEEALEI 960
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+ M K+ + D T V AC+ + R H V+ GF+ N+ V N ++ MY +
Sbjct: 961 YCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGK 1020
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G + D+ F ++ + VSWNT+++ +A + A F MG G +P+ +T+ SL
Sbjct: 1021 IGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSL 1080
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
LS+ G+ E+M+LF M ++ GI ++E ++ +
Sbjct: 1081 LSSHARCGQHVETMELFGRM-RMRGIGATAEALAVVLSV 1118
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 148/350 (42%), Gaps = 75/350 (21%)
Query: 128 IDDAFDYFQAMPER---NTATYNAMISGFLKHGRLEEATRLFEQMPRRN----------V 174
+ DA F+ P N +N+++ + HG EEA ++ +M + V
Sbjct: 920 VSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLV 979
Query: 175 ISYTAMLD---------------GFM--------------KKGEVDKARALSDYMSFKNV 205
I A++ GF K G +D AR + + M+ ++
Sbjct: 980 IRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSC 1039
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
VSW M++GY N A E+F M+ +A L +
Sbjct: 1040 VSWNTMVSGYALNYDCHGASEMFR-----------------------MMGSAGL-----E 1071
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
P + V++ ++++ +A+ G E + LF M + L V + L +EG+
Sbjct: 1072 P-NLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKV 1130
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H V++ GFE + V N++I +Y + G + + + F +I + N+VSWN +I+++A G
Sbjct: 1131 IHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGW 1190
Query: 386 YEKALIFFSQMGLNG----FDPDGITFLSLLSACGHAGKVNESMDLFELM 431
++A F Q+ P+ +++ +++ G+ E+++LF M
Sbjct: 1191 CDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRM 1240
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 135/291 (46%), Gaps = 30/291 (10%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG--------FLQES 100
Y+FV N+ I + G ++AAR LF ++ TK++++WNA+I+ Y G FLQ
Sbjct: 1143 YLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLE 1202
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMIS----- 151
K M N+VSW+ +I G + ++A + F+ M + N+ T +++S
Sbjct: 1203 KTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAEL 1262
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
L GR E + + N++ +++ + K G + + + + K+++SW M
Sbjct: 1263 AALHLGR-EIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTM 1321
Query: 212 ITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFE------R 263
+ GY + A F +M ++ + A+++ G++ R LF+ R
Sbjct: 1322 VAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFR 1381
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
++P+ + M+ + G+ +EA ++ M ++P+ ++ +C
Sbjct: 1382 VEPQ-MEHYACMVDLLGRAGLLQEASKVVK---SMPVEPNACVWGALLNSC 1428
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 15/142 (10%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R + V N I+ +++G +F+++ KD+I+WN ++ GY +G + +
Sbjct: 1275 VVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENA 1334
Query: 101 KNLFQSMPVKN----------IVSWNCMIAGCIDNDR--IDDAFDYFQAMPERNTATYNA 148
F M +K+ V C AG + R D F+ P+ Y
Sbjct: 1335 IRTFDQM-IKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQME--HYAC 1391
Query: 149 MISGFLKHGRLEEATRLFEQMP 170
M+ + G L+EA+++ + MP
Sbjct: 1392 MVDLLGRAGLLQEASKVVKSMP 1413
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 192/633 (30%), Positives = 306/633 (48%), Gaps = 117/633 (18%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ N I+ S++ ++ AR +FD+M K++ITW+++++ Y Q G+ +E+ +F + K
Sbjct: 85 FLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRK 144
Query: 111 NIVSWN----------CMIAGCID------------------------------NDRIDD 130
+ N C G ++ N I++
Sbjct: 145 SGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEE 204
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRRNVIS-------- 176
A F + E+ T+ +I+G+ K GR + LF QM P R V+S
Sbjct: 205 ARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSM 264
Query: 177 -------------------------YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
++D + K V R L D M KN++SWT M
Sbjct: 265 LEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTM 324
Query: 212 ITGYVKNERFCEARELFYRM------PD-------------------------------Y 234
I+GY++N EA +LF M PD
Sbjct: 325 ISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANL 384
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ + FV +I + K +L +A+ +F+ + ++ +S+NAMI GY+ EAL LF
Sbjct: 385 ESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHE 444
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M +P++ T ++ TA S L L G+Q H +++ G + V NA++ MY++CG
Sbjct: 445 MRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGS 504
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I ++ F ++V WN++I+ AQHG E+AL F +M G P+ +TF+++LSA
Sbjct: 505 IEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSA 564
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C HAG+V + ++ F M +GI P +EHY C+V +L R+G+L +A + + MP E
Sbjct: 565 CSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 623
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VW SLL+AC I NVELG+ AA+ DP++S Y++LSN++A+ GMW DV +VR M
Sbjct: 624 VWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMD 683
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
V K+ SWIE+ NKV+ F+ D +H D
Sbjct: 684 SSEVVKEPGRSWIEVNNKVNVFIARDTTHREAD 716
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 210/448 (46%), Gaps = 48/448 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D N +I ++ + ++ +F MP KN+++W+ M++ ++A F +
Sbjct: 83 DTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQ 142
Query: 140 ERNTATYN-----AMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFMKKGEV 190
++ N ++I + G +E+ +L + R ++V T+++D + K G +
Sbjct: 143 RKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNI 202
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY---------- 234
++AR + D +S K V+WT +I GY K R + ELF +M PD
Sbjct: 203 EEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSAC 262
Query: 235 ---------------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ +V VV +I + K ++ R LF+++ K+ +S+
Sbjct: 263 SMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWT 322
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
MI+GY QN EA++LF M ++ +PD SV T+C + + L +GRQ H I+
Sbjct: 323 TMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKA 382
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
E++ V N +I MY++ ++D++ F + N++S+N +I ++ +AL F
Sbjct: 383 NLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELF 442
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M + P+ TF +L++A + + +VK+ G+ LVD+ ++
Sbjct: 443 HEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM-GLDFCPFVTNALVDMYAK 501
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLA 481
G +E+A ++ + D W S+++
Sbjct: 502 CGSIEEARKMFNSSIWR-DVVCWNSMIS 528
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H +I +G +++ + N +I + S+ + ++ + F ++ NL++W+++++ ++Q G+
Sbjct: 72 HGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYS 131
Query: 387 EKALIFFSQMGL-NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E+AL+ F + +G P+ S++ AC G V + L +V+ G T
Sbjct: 132 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVR-SGFDQDVYVGT 190
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+D S+ G +E+A + + E W +++A
Sbjct: 191 SLIDFYSKNGNIEEARLVFDQLS-EKTAVTWTTIIAG 226
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 291/549 (53%), Gaps = 17/549 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A + + + A ++F++M +D TWNA+++G+ Q+G ++ +LF+ M +
Sbjct: 87 VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRL 146
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEE 161
I + + I + + + +AM + N IS + K G L+
Sbjct: 147 NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS 206
Query: 162 ATRLFEQMPR--RNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVSWTVMITGYV 216
A +FE + R R V+S+ +M + GE A L M FK +S + +
Sbjct: 207 AKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASC 266
Query: 217 KNERFCEARELFYRMPDY---DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+N L + + D+++ + I+ + K +ARLLF+ + + CVS+
Sbjct: 267 QNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWT 326
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV-IR 332
MI+GYA+ G +EAL LF MIK +PD TL+S+ + C L G+ I
Sbjct: 327 VMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIY 386
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
NV +CNA+I MYS+CG I ++ F +V+W T+IA +A +G + +AL
Sbjct: 387 GCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKL 446
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
FS+M + P+ ITFL++L AC H+G + + + F +M +VY I P +HY+C+VD+L
Sbjct: 447 FSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLG 506
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
R G+LE+A ++ + M + D G+WG+LL AC I+ NV++ E AA+ + L+PQ +A YV
Sbjct: 507 RKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVE 566
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
++N+YAAAGMW R+R +MK++ + K S I++ K H F G+ H + I+
Sbjct: 567 MANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFT 626
Query: 573 LKRASVQMK 581
L S+ K
Sbjct: 627 LNGLSLFAK 635
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+VFV TA + F K ++ A +FER+ +D ++NAM++G+ Q+G ++A LF M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
++ PD T++++ + S + L H + IR G + V+V N I+ Y +CG +
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 357 DSELAFRQIHSPN--LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
++L F I + +VSWN++ A++ G A + M F PD TF++L ++
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 415 C 415
C
Sbjct: 266 C 266
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 158/392 (40%), Gaps = 67/392 (17%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I L + Q + N IS S++ +AR LFD MT++ ++W +I+GY + G + E+
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEAL 342
Query: 102 NLFQSM----PVKNIVSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISG 152
LF +M ++V+ +I+GC ++ + DA N NA+I
Sbjct: 343 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDM 402
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+ K G + EA +F+ P + V+++ T MI
Sbjct: 403 YSKCGSIHEARDIFDNTPEKTVVTW-------------------------------TTMI 431
Query: 213 TGYVKNERFCEARELFYRMP--DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
GY N F EA +LF +M DY N A++ G LE F ++ +
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 271 S-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC----------- 314
S ++ M+ + G EEAL L M +PD ++ AC
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEALELIR---NMSAKPDAGIWGALLNACKIHRNVKIAEQ 548
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+A L N Q + AN+ + ++R I+ + ++ +++ N
Sbjct: 549 AAESLFNLEPQMAAPYVE---MANIYAAAGMWDGFARIRSIM-KQRNIKKYPGESVIQVN 604
Query: 375 TIIAAF--AQHGHYEKALIFFSQMGLNGFDPD 404
+F +HGH E +I+F+ GL+ F D
Sbjct: 605 GKNHSFTVGEHGHVENEVIYFTLNGLSLFAKD 636
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
E+L LF M + +P++ T V AC+ L + H +I++ F ++V V A +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
M+ +C + + F ++ + +WN +++ F Q GH +KA F +M LN PD +
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKV 434
T ++L+ + +S+ L E M V
Sbjct: 155 TVMTLI----QSASFEKSLKLLEAMHAV 178
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 288/523 (55%), Gaps = 34/523 (6%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----E 140
N ++ Y + G + +++ +F+ M V++ VSWN M++G N A + F+ M E
Sbjct: 174 NELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLE 233
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV--------------ISYTAMLDGFMK 186
N T+ +++S + G+ E LF +M R + + A +G +
Sbjct: 234 PNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVI 293
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
G V K +Y+ KN +I Y K+ AR LF + KN+ A+I+
Sbjct: 294 HGYVVKG-GFENYLFVKNS-----LICLYGKHGNVNAARILFLEIKT--KNIVSWNALIS 345
Query: 247 GFCKVGMLENARLLFERIQPKD--------CVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
+ +G + A +F +++ D VS++A+I G+A G EEAL LF M
Sbjct: 346 SYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLA 405
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++ + T+ SV + C+ L L+ GR+ H V+R+ + N+ V N +I MY++ G +
Sbjct: 406 KVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEG 465
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
L F +I + +L+SWNT++A + HG E A+ F QM +GF+PDG+TF+++LSAC HA
Sbjct: 466 NLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHA 525
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E +LF+ M+K + + P EHY C+VD+L RAG L++A ++ + MP E + VWG+
Sbjct: 526 GLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGA 585
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL +C ++ N E+ E A ++ L+ + + Y++LSN+YAA+G W D +VR+ K +G+
Sbjct: 586 LLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGL 645
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
K SWI++ KV+ F G+ H +++++ LK +QM+
Sbjct: 646 KKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQME 688
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 195/473 (41%), Gaps = 97/473 (20%)
Query: 17 FPPILR---ILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLF 73
FP ++R ++ + C + H ++ + + V N + + G++ AR++F
Sbjct: 138 FPLVIRACALMGSRKLCRSVHGH----VVEMGFQWNLHVGNELMGMYGKIGRMDDARKVF 193
Query: 74 DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDRID 129
++M + ++WN +++GY N + +F+ M N+V+W +++ +
Sbjct: 194 ERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHV 253
Query: 130 DAFDYFQAMPERNTATY---------------------------------------NAMI 150
+ + F M R N++I
Sbjct: 254 ETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLI 313
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL-------SDY-MSF 202
+ KHG + A LF ++ +N++S+ A++ + G D+A A+ +Y M
Sbjct: 314 CLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 373
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM------------------------------- 231
NVVSW+ +I G+ + EA ELF RM
Sbjct: 374 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 433
Query: 232 ------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
D N+ V +I + K G + L+FE+I+ KD +S+N M+AGY +G+
Sbjct: 434 HGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLG 493
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNA 344
E A+R F MIK +PD T V+V +ACS L+ EGR+ +I+ E +
Sbjct: 494 ENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYAC 553
Query: 345 VITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
++ + R G + ++ + + PN W ++ + H + E A SQ+
Sbjct: 554 MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQI 606
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 116/219 (52%), Gaps = 6/219 (2%)
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS----FNAMIAGYAQNGVAEEALRL 291
++ F+ +++ + G++ +A+ +FE + P +C S +N+++ +G EEAL +
Sbjct: 64 RSAFLAARVVSVYAGFGLVSDAQRVFE-VSPIECFSNLLLWNSILRANVAHGYCEEALEI 122
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+ M K+ + D T V AC+ + R H V+ GF+ N+ V N ++ MY +
Sbjct: 123 YCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGK 182
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G + D+ F ++ + VSWNT+++ +A + A F MG G +P+ +T+ SL
Sbjct: 183 IGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSL 242
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
LS+ G+ E+M+LF M ++ GI ++E ++ +
Sbjct: 243 LSSHARCGQHVETMELFGRM-RMRGIGATAEALAVVLSV 280
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 145/350 (41%), Gaps = 75/350 (21%)
Query: 128 IDDAFDYFQAMPER---NTATYNAMISGFLKHGRLEEATRLFEQMPRRN----------V 174
+ DA F+ P N +N+++ + HG EEA ++ +M + V
Sbjct: 82 VSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLV 141
Query: 175 ISYTAMLD---------------GFM--------------KKGEVDKARALSDYMSFKNV 205
I A++ GF K G +D AR + + M+ ++
Sbjct: 142 IRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSC 201
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
VSW M++GY N A E+F M ++
Sbjct: 202 VSWNTMVSGYALNYDCHGASEMFRMMGSAG----------------------------LE 233
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
P + V++ ++++ +A+ G E + LF M + L V + L +EG+
Sbjct: 234 P-NLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKV 292
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H V++ GFE + V N++I +Y + G + + + F +I + N+VSWN +I+++A G
Sbjct: 293 IHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGW 352
Query: 386 YEKALIFFSQMGLNG----FDPDGITFLSLLSACGHAGKVNESMDLFELM 431
++A F Q+ P+ +++ +++ G+ E+++LF M
Sbjct: 353 CDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRM 402
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 190/615 (30%), Positives = 310/615 (50%), Gaps = 55/615 (8%)
Query: 22 RILSTPDSCGNFTP----HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT 77
+ILST D C + H+ LF + SALS + AR LFDQ+
Sbjct: 27 QILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIP 86
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLF-------QSMPVKNIVSWNCMIAGCIDNDRIDD 130
++ TWN +I Y + +S +F + +P K + A + R+
Sbjct: 87 QPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGT 146
Query: 131 AFD---------------------------------YFQAMPERNTATYNAMISGFLKHG 157
A F+ + ++ ++N+MIS F +
Sbjct: 147 AVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGN 206
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFM----KKGEVDKARALSDYMSFKNV-VSWTV-- 210
E+A LF +M R NV+ + + G + KK +++ R + Y+ K + V T+
Sbjct: 207 CPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCN 266
Query: 211 -MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
M+ Y K +A++LF MP+ D VF T M+ G+ K+G + ARL+F + K+
Sbjct: 267 AMLDMYTKCGSVDDAQKLFDEMPERD--VFSWTIMLDGYAKMGDYDAARLVFNAMPVKEI 324
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
++N +I+ Y QNG +EAL +F+ + + +PD+ TLVS +AC+ L ++ G HV
Sbjct: 325 AAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHV 384
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
+ R G N + ++++ MY++CG + + F + ++ W+ +IA HG +
Sbjct: 385 YIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKA 444
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
A+ F +M P+ +TF ++L AC HAG V+E F M VYG++P +HY C+V
Sbjct: 445 AIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMV 504
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
DIL RAG LE+A ++ M VWG+LL AC +++NVELGELA+ ++ +L+P+N
Sbjct: 505 DILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHG 564
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDK 568
V+LSN+YA G W V+ +R LM++ + K+ S IE VH FL GD +HP
Sbjct: 565 AIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSN 624
Query: 569 IHLELKRASVQMKSV 583
I+ +L+ + ++KSV
Sbjct: 625 IYSKLEEIATKLKSV 639
>gi|293336045|ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea mays]
gi|195615774|gb|ACG29717.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
gi|223946951|gb|ACN27559.1| unknown [Zea mays]
Length = 616
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 274/508 (53%), Gaps = 27/508 (5%)
Query: 104 FQSMPVKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLE 160
F +P KN S+N ++A + D + DAF F MP RN +YN ++S HGR
Sbjct: 98 FYDLPHKNAHSYNTLLAALLRRPDTLPDAFRLFDTMPADSRNLVSYNTLMSSLAHHGRQV 157
Query: 161 EATRLFEQMPRRNVISYTAMLDGFM------KKGEVDKARALSDY--------MSFKNVV 206
EA R+ ++ R + +D F + AR L + M F V+
Sbjct: 158 EALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIGAARPLREMHGAVVVSGMEF-TVI 216
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
M+ Y K R +AR LF ++ D + T+MI+G+C+V L A +F+ +
Sbjct: 217 MANAMLNAYSKARRVEDARHLFDQVSIRDNVTW--TSMISGYCQVKKLHEAVQVFDMMPD 274
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
KD +++ A+I+G+ QNG + AL LF M+ + P LVS AC+ L L+ G++
Sbjct: 275 KDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLVTRGKEL 334
Query: 327 HVLVIRNGFEA---NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
H ++R + N+ + NA++ MYS+CG ++ + F + + +SWN+++ F+ +
Sbjct: 335 HCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHN 394
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +++L F +M + G P +TFL++L+AC H+G V+ + E M + +G+ P +EH
Sbjct: 395 GLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLVLESM-EDHGVEPRAEH 453
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFE---ADTGVWGSLLAACVINLNVELGELAAKKMR 500
Y +D L R QLE+A + + +P G WG+LL AC ++ N+EL E A+ +
Sbjct: 454 YAAFIDALGRNHQLEEATEFIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEEVAEFLF 513
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
L+P NS YVM+SN+YAAAG W D RVR LMKE+G+ K AYSWIE+ + H F+ D
Sbjct: 514 RLEPGNSGRYVMMSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWIEVRSAKHVFVADD 573
Query: 561 MSHPCIDKIHLELKRASVQMKSVDDFVE 588
+SH DKI+ L + M +D E
Sbjct: 574 ISHCEADKIYEMLGKLLDHMSVAEDPTE 601
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 19/257 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + NA ++A S+A ++ AR LFDQ++ +D +TW ++I+GY Q L E+ +F MP
Sbjct: 215 VIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPD 274
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN-TATYNAMISGFLKHGRLEEATRLFEQ 168
K+ ++W +I+G N D A + F+ M + + T ++S +L TR E
Sbjct: 275 KDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLVTRGKEL 334
Query: 169 ---MPRRNVIS-------YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
+ RRN+ S + A++D + K G++ A A+ D+M ++ +SW M+TG+ N
Sbjct: 335 HCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHN 394
Query: 219 ERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFER-----IQPKDCVS 271
++ +F M VT A++T G++ N RL+ E ++P+
Sbjct: 395 GLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLVLESMEDHGVEPR-AEH 453
Query: 272 FNAMIAGYAQNGVAEEA 288
+ A I +N EEA
Sbjct: 454 YAAFIDALGRNHQLEEA 470
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 265/476 (55%), Gaps = 25/476 (5%)
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
N+V +I+ R+DDA F+ + +N+ T+NAM++ + GR EA LF +M
Sbjct: 65 NVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMC 124
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
R S +A D F ++ L D E+ E E+ R
Sbjct: 125 ER---SRSARPDKFSFSIAIEACSNLEDL-------------------EQGREIHEMLRR 162
Query: 231 M-PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNGVAEEA 288
+ K+V V TA++ + K G LE AR +F+ I+ D V +NAMIA YAQ+G ++A
Sbjct: 163 EGKELHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQA 222
Query: 289 LRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
L L+ M D+ P T V+V C+ L L +GR H V F+AN+ V NA++
Sbjct: 223 LDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVH 282
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY +CG + ++ F + + +SWNTII+++A HGH ++AL+ + +M L G P +T
Sbjct: 283 MYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVT 342
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
F+ LLSAC H G V + +D F M + I PS H+ C++D+L R G+L +A + + M
Sbjct: 343 FVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSM 402
Query: 468 PFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVT 527
P +A+ W SLL AC + +++ G AA ++ + P S YV+LSN+YAAAG W+DV
Sbjct: 403 PIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVE 462
Query: 528 RVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
++R +M +GV K SWIEIG+ VH F+ GD SHP ++I++EL + +MK +
Sbjct: 463 KIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGL 518
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 177/367 (48%), Gaps = 30/367 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V A IS + G++ AR F+++ K+ +TWNA++T Y +G +E+ LF+ M
Sbjct: 66 VVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCE 125
Query: 110 K------NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG------FLKHG 157
+ + S++ I C + + ++ + + + + ++ G + K G
Sbjct: 126 RSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCG 185
Query: 158 RLEEATRLFEQMPRR-NVISYTAMLDGFMKKGE----VDKARALSDYM-------SFKNV 205
LEEA ++F+ + + + + AM+ + + G +D R++ D +F V
Sbjct: 186 DLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTV 245
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+ ++ +K R AR R ++D N+ V A++ + K G L+ A +F ++
Sbjct: 246 IDVCAELSA-LKQGRAIHAR---VRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMK 301
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
KD +S+N +I+ YA +G +++AL L+ M ++P + T V + +ACS L+ +G
Sbjct: 302 LKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD 361
Query: 326 S-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQH 383
+ + + + +V +I + R G + ++EL + + N V W +++ A H
Sbjct: 362 YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTH 421
Query: 384 GHYEKAL 390
G ++ +
Sbjct: 422 GDLKRGV 428
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 5/212 (2%)
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL--LNEGRQSHVLVIRN 333
+A ++ NG EAL F M + +PD T + A + + +++GR+ H +
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G NV V AVI+MY +CG + D+ AF ++ N V+WN ++ + G +AL F
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120
Query: 394 SQMGLNGFD--PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDI 450
+M PD +F + AC + + + ++ E++ + + T L+++
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
S+ G LE+A ++ + +AD+ W +++AA
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAA 212
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 286/552 (51%), Gaps = 48/552 (8%)
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
+V +++ Y + G + +++ +F MP +N SW+ M+AG ++AFD F+
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208
Query: 137 AMPERN----------------------------------------TATYNAMISGFLKH 156
M E + N++++ + K
Sbjct: 209 LMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKA 268
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
G + A +FE RN I+++AM+ G+ + GE D A ++ M G +
Sbjct: 269 GCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVL 328
Query: 217 KNERFC-------EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
+A L ++ ++ ++V +A++ + K G + +A+ F+++ D
Sbjct: 329 NASSDLGALAVGKQAHGLMVKL-GFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDI 387
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V + AM++G+ QNG EEAL L++ M K + P +T+ S AC+ + L G+Q H
Sbjct: 388 VLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQ 447
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+++ G V +A+ TMYS+CG + D FR+I ++++WN+II+ F+Q+G A
Sbjct: 448 IVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGA 507
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F +M + G PD ITF+++L AC H G V+ + F LM K YG+ P +HY C+VD
Sbjct: 508 LDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVD 567
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
ILSRAG L++A + + + T +W +L AC + ++G A +++ EL ++S+
Sbjct: 568 ILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSA 627
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
Y++LSN+YA+ W DV RVR LM+ +GV K SW+E+ ++VH F+ G+ HP + I
Sbjct: 628 YILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENI 687
Query: 570 HLELKRASVQMK 581
+ +L+R + MK
Sbjct: 688 NAQLRRLAKHMK 699
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 138/258 (53%), Gaps = 3/258 (1%)
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
++P NV+V T+++ +CK+G++ +AR +F+ + ++ S++ M+AGYA +EEA
Sbjct: 145 KIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAF 204
Query: 290 RLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
LF M++ + + +V +A S L G Q H L++++G VSV N+++TM
Sbjct: 205 DLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTM 264
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y++ G + + F N ++W+ +I +AQ+G + A+ FSQM GF P TF
Sbjct: 265 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 324
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+ +L+A G + LMVK+ G + LVD+ ++ G + A + +
Sbjct: 325 VGVLNASSDLGALAVGKQAHGLMVKL-GFEVQIYVKSALVDMYAKCGCIADAKEGFDQL- 382
Query: 469 FEADTGVWGSLLAACVIN 486
+E D +W ++++ V N
Sbjct: 383 YEVDIVLWTAMVSGHVQN 400
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 156/324 (48%), Gaps = 23/324 (7%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
+V V N+ ++ ++AG + AA +F+ ++ ITW+A+ITGY QNG + ++F M
Sbjct: 254 FVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMH 313
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLE 160
G ++ A + E +A++ + K G +
Sbjct: 314 AAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIA 373
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV-SWTVMITGYVKNE 219
+A F+Q+ +++ +TAM+ G ++ GE ++A L M + ++ S + + +G
Sbjct: 374 DAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGL---- 429
Query: 220 RFC-------EARELFYRMPDYDKNVF--VVTAMITGFCKVGMLENARLLFERIQPKDCV 270
R C ++L ++ Y + V +A+ T + K G LE+ +F RI +D +
Sbjct: 430 RACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVI 489
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++N++I+G++QNG AL LF M PD+ T +++ ACS + L++ G + L+
Sbjct: 490 AWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLM 549
Query: 331 IRN-GFEANVSVCNAVITMYSRCG 353
++ G + ++ + SR G
Sbjct: 550 TKDYGLTPRLDHYACMVDILSRAG 573
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L ++V +A + ++ G I+ A++ FDQ+ D++ W A+++G+ QNG +E+
Sbjct: 347 MVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEA 406
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER--------NTATYNAMISG 152
L+ M + I+ IA + A + + + + +A+ +
Sbjct: 407 LTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTM 466
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
+ K G LE+ +F ++P R+VI++ +++ GF + G + A L + M + +
Sbjct: 467 YSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTI 520
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V +A + S+ G + +F ++ +DVI WN+II+G+ QNG + +LF+ M ++
Sbjct: 459 VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEG 518
Query: 112 IVSWNC----MIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
+ N ++ C +D ++YF M + T Y M+ + G L+EA
Sbjct: 519 TIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA 578
Query: 163 TRLFEQM 169
E +
Sbjct: 579 KDFIESI 585
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 194/617 (31%), Positives = 298/617 (48%), Gaps = 109/617 (17%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ N+ I+ ++ G I A+ LFD T D ++ N +++GY +NG + ++ LF MP K
Sbjct: 89 FIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNK 148
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGF----------LKH 156
VS+ MI G + N +A + F+ M N T +IS + H
Sbjct: 149 GCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVH 208
Query: 157 G-------------------------RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
G + EA RLF++MP RN++++ ML+G+ K G VD
Sbjct: 209 GLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVD 268
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------ 233
+AR L D + K+V+SW MI GY++ R EA E++ M P+
Sbjct: 269 EARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACG 328
Query: 234 -------------------YDKNVFVVTAMITGFCKVGMLENARLLFE------------ 262
+D F+ T +I + GM++ A L FE
Sbjct: 329 RGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNA 388
Query: 263 -------------------RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
++ +D S++ MI+GYAQ+ + AL LF M+ ++P+
Sbjct: 389 LTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPN 448
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
+ T+VSVF+A + L L EG+ +H + N ++ A+I MY++CG I + F
Sbjct: 449 EVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFN 508
Query: 364 QIHS--PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
QI ++ WN II A HGH L FS M P+ ITF+ +LSAC HAG V
Sbjct: 509 QIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLV 568
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+F+ M Y + P +HY C++DIL RAG LE+A ++ + MP EAD +WG+LLA
Sbjct: 569 ESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLA 628
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC + NV +GE AA+ + L P + V+LSN+YA AG W +V+ VR +M+ Q + ++
Sbjct: 629 ACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDRE 688
Query: 542 CAYSWIEIGNKVHYFLG 558
YS G+ + G
Sbjct: 689 PGYSGFVAGSDLDRMSG 705
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 181/421 (42%), Gaps = 102/421 (24%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
NT N++I+ + K G ++ A LF+ + +S M+ G+++ G++D AR L D M
Sbjct: 87 NTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMP 146
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDKNVFVVTA-----------M 244
K VS+T MI G+V+N F EA E+F M P+ V V++A M
Sbjct: 147 NKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRM 206
Query: 245 ITG--------------------FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+ G +C + AR LF+ + ++ V++N M+ GYA+ G+
Sbjct: 207 VHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGL 266
Query: 285 AEEALRLFSG-------------------------------MIKMDMQPDDATLVSVFTA 313
+EA LF G M++ P++ +V++ +A
Sbjct: 267 VDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSA 326
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG-------------------- 353
C + +G Q H V++ GF+ + +I Y+ CG
Sbjct: 327 CGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESW 386
Query: 354 ----------GILDSEL-AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
G++D L F ++H ++ SW+T+I+ +AQ H + AL F +M G
Sbjct: 387 NALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIK 446
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDILSRAGQLEKAW 461
P+ +T +S+ SA G + E E M IP +++ L+D+ ++ G + A
Sbjct: 447 PNEVTMVSVFSAIATLGTLQEGKLAHEYMRSES--IPFNDNLRAALIDMYAKCGSINSAL 504
Query: 462 Q 462
Q
Sbjct: 505 Q 505
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 36/190 (18%)
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
+ LVS +CS+L +++GRQ H L+ + G N + N++I MY++CG I +++L F
Sbjct: 53 ELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFD 112
Query: 364 ---------------------QIHS--------PN--LVSWNTIIAAFAQHGHYEKALIF 392
QI + PN VS+ T+I F Q+G + +AL
Sbjct: 113 GFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEV 172
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY--GIIPSSE---HYTCL 447
F M G P+ +T ++++SAC H G+V + L+VK++ G++ S H CL
Sbjct: 173 FKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCL 232
Query: 448 VDILSRAGQL 457
+ A +L
Sbjct: 233 CSGVREARRL 242
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 310/615 (50%), Gaps = 63/615 (10%)
Query: 4 NSYFHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRA 63
N+ H + + FP + + ++ G FT +C FS+ + KISA +
Sbjct: 35 NAPSHDPHRQSHSFPYLGGLRASLPETG-FTNLVDSCSTHSFSSHAL-----KISA--KL 86
Query: 64 GKISAARQLFDQMTTKD----VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
G + +QL + + N ++ Y + + +F MP+KN+VSWN +I
Sbjct: 87 GFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLI 146
Query: 120 AGCIDND----RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----- 170
G ++ + + F YF+ M A ++G L+ + Q+
Sbjct: 147 CGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILK 206
Query: 171 ---RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY------------ 215
N +A++D + K G VD+A++ D +S +++V W VM++ Y
Sbjct: 207 SGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGV 266
Query: 216 --------VKNERFC------------------EARELFYRMPDYDKNVFVVTAMITGFC 249
VK + F + L R+ +D +V V +A++ +
Sbjct: 267 FKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRL-SFDLDVLVASALVDMYS 325
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K +E+AR F+ + K+ VS+ MI GY Q+G +EA+RL MI++ PD+ L S
Sbjct: 326 KNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALAS 385
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ ++C L +E Q H V+ NGFEA +S+ NA+++ YS+CG I + +F + P+
Sbjct: 386 ILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPD 445
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
++SW +++ A+A HG ++ + F +M + PD + FL +LSAC H G V E + F
Sbjct: 446 IISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFN 505
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
LM+ VY I+P SEHYTC++D+L RAG L++A + MP E + G+ L AC ++ NV
Sbjct: 506 LMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVHRNV 565
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
L A++K+ ++P A Y ++SN+YA+ G W DV RVR LM+E+ K SW+EI
Sbjct: 566 GLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMEI 625
Query: 550 GNKVHYFLGGDMSHP 564
+VH F+ D +HP
Sbjct: 626 AGEVHTFVSRDKTHP 640
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 187/650 (28%), Positives = 303/650 (46%), Gaps = 121/650 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V A + S K+ A +F +M ++ + W+A+I GY +N E L++ M
Sbjct: 205 VVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLD 264
Query: 108 --------------------------------------PVKNIVSWNC--MIAGCIDNDR 127
NIV M A C DR
Sbjct: 265 EGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKC---DR 321
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR--------------- 172
+ DA F P ++NA+I G+ + ++ EA +F + +
Sbjct: 322 MVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTA 381
Query: 173 ------------------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
N+ +LD + K G + +A + D M K+ VSW
Sbjct: 382 CSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSW 441
Query: 209 TVMITGYVKNERFCEARELFYRM------PD------------------YDKNV------ 238
+I + +NE E LF M PD Y V
Sbjct: 442 NAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIK 501
Query: 239 -------FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
FV +A+I +CK GML A + ER++ + VS+N++I+G++ E AL
Sbjct: 502 SGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSY 561
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
FS M+++ + PD+ T +V C+ L + G+Q H +++ ++V + + ++ MYS+
Sbjct: 562 FSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSK 621
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG + DS + F + + V+W+ +I A+A HG E A+ F +M L P+ F+S+
Sbjct: 622 CGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISV 681
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L AC H G V++ + F M YG+ P EHY+C+VD+L R+GQ+ +A ++ + MPFEA
Sbjct: 682 LRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEA 741
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
D +W +LL C + NVE+ E AA + +LDPQ+S+ YV+LSN+YA AGMW +V ++R
Sbjct: 742 DDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRS 801
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
MK + K+ SWI++ ++VH FL GD +HP ++I+ + +MK
Sbjct: 802 FMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMK 851
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 232/478 (48%), Gaps = 47/478 (9%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV+N + + ++ A +FD+M +DVI+WN +I GY G ++ ++ LF SMP
Sbjct: 73 VFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPE 132
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMI---SGFLKHGRLEEA 162
+++VSWN M++ + N + + F M + + AT+ ++ +G +G +
Sbjct: 133 RDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQV 192
Query: 163 TRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
L QM +V++ TA++D + ++D A + M +N V W+ +I GYV+N+RF
Sbjct: 193 HCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRF 252
Query: 222 CEARELFYRMPDYDKNV-------------------------------------FVVTAM 244
E +L+ M D V V TA
Sbjct: 253 TEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTAT 312
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
+ + K + +AR +F S NA+I GYA+ EAL +F + K + D+
Sbjct: 313 LDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDE 372
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
+L TACSA++ EG Q H L ++ G + N+ V N ++ MY++CG ++++ L F
Sbjct: 373 ISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDD 432
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ + VSWN IIAA Q+ H E+ L F M + +PD TF S++ AC +N
Sbjct: 433 MEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYG 492
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
M++ ++K G+ + ++D+ + G L +A +I + + E T W S+++
Sbjct: 493 MEVHGRVIKS-GMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLE-ERTTVSWNSIISG 548
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 220/495 (44%), Gaps = 52/495 (10%)
Query: 7 FHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKI 66
H+T L R+L PIL +TP + + + + ++F + + A I
Sbjct: 2 LHRT-LSRVLHLPILNSQTTPPYAIHSISSNQMNPTKKLTFSHIFQKCSNLKA------I 54
Query: 67 SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND 126
+ +Q Q+T +TG+ V + NC++
Sbjct: 55 NPGKQAHAQIT----------VTGF-----------------VPTVFVSNCLLQFYCKCL 87
Query: 127 RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
++ AF+ F MP+R+ ++N MI G+ G +E A LF+ MP R+V+S+ +ML +++
Sbjct: 88 NLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQ 147
Query: 187 KG------EV-DKARALS---DYMSFKNVVSWTVMITGY-VKNERFCEARELFYRMPDYD 235
G E+ K R L DY +F V+ I Y + + C A ++ +D
Sbjct: 148 NGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQM-----GFD 202
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+V TA++ + L++A +F + ++ V ++A+IAGY +N E L+L+ M
Sbjct: 203 SDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVM 262
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ M AT S F +C+ L G Q H ++ F + V A + MY++C +
Sbjct: 263 LDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRM 322
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+D+ F +P S N +I +A+ +AL F + + D D I+ L+AC
Sbjct: 323 VDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTAC 382
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
E + L L VK G+ + ++D+ ++ G L +A I M + D
Sbjct: 383 SAIKGYLEGIQLHGLAVKC-GLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DAVS 440
Query: 476 WGSLLAACVINLNVE 490
W +++AA N +VE
Sbjct: 441 WNAIIAAHEQNEHVE 455
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 282/525 (53%), Gaps = 43/525 (8%)
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
+ DV NA + + +G + ++ LF P +++VSWN +I G + + +A + F
Sbjct: 153 SADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWR 212
Query: 138 MPERNTA------TYNAMISGFLKHGRLEEATRLFE----QMPRRNVISYTAMLDGFMKK 187
+ E A T +SG + G LE RL E + R V A++D ++K
Sbjct: 213 LVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKC 272
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
G ++ A+++ + + K VVSWT MI G
Sbjct: 273 GSLELAKSVFERIDNKTVVSWTT---------------------------------MIVG 299
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
++GM+E+AR+LF+ + +D +NA++AGY QN +EA+ LF M + + P++ T+
Sbjct: 300 HARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITM 359
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
V++ +ACS L L G H + R+ +V++ +++ MY++CG I + F++I
Sbjct: 360 VNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPD 419
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N ++W +I A HGH ++A+ +F +M G PD ITF+ +LSAC HAG V E
Sbjct: 420 KNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQF 479
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
F LM + Y + +HY+C++D+L RAG L++A Q+ MP + D VWG+L AC ++
Sbjct: 480 FSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHG 539
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
N+ LGE AA K+ ELDP +S +YV+L+N+YA A M + +VR++M+ GV K S I
Sbjct: 540 NITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCI 599
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATS 592
E+ VH F+ D SH I+ L ++QMK + ++I+ +
Sbjct: 600 ELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMKHTANLIDISET 644
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 205/440 (46%), Gaps = 57/440 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
VFV NA + S +G + AR+LFD+ +DV++WN +I GY ++G +E+ LF +
Sbjct: 156 VFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVE 215
Query: 108 ----PVKNIVSWNCMIAGCI---DNDRIDDAFDYFQAMPERNTATY-NAMISGFLKHGRL 159
+ V+ ++GC D + ++ + R T NA++ ++K G L
Sbjct: 216 DGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSL 275
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
E A +FE++ + V+S+T M+ G + G ++ AR L D M ++V W ++ GYV+N+
Sbjct: 276 ELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNK 335
Query: 220 RFCEARELFYRMPD--YDKN-----------------------------------VFVVT 242
+ EA LF+ M + D N V + T
Sbjct: 336 QGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGT 395
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
+++ + K G ++ A +F+ I K+ +++ AMI G A +G A+EA+ F MI + +QP
Sbjct: 396 SLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQP 455
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVI-RNGFEANVSVCNAVITMYSRCGGILDSE-L 360
D+ T + V +AC L+ EGRQ L+ + E + + +I + R G + ++E L
Sbjct: 456 DEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQL 515
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHY---EKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
P+ V W + A HG+ EKA M L DP LL+
Sbjct: 516 VNTMPMDPDAVVWGALFFACRMHGNITLGEKA-----AMKLVELDPSDSGIYVLLANMYA 570
Query: 418 AGKVNESMDLFELMVKVYGI 437
+ + D +M++ G+
Sbjct: 571 EANMRKKADKVRVMMRHLGV 590
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 35/280 (12%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ +VFVV A + + G + AR LF+ +D VS+N +I GY ++G+ EAL LF
Sbjct: 152 FSADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFW 211
Query: 294 GMIK--MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+++ ++PD+ T++ + C+ + L G++ H V G V + NAV+ MY +
Sbjct: 212 RLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVK 271
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG----------LNGF 401
CG + ++ F +I + +VSW T+I A+ G E A + F +M + G+
Sbjct: 272 CGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGY 331
Query: 402 ---------------------DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
DP+ IT ++LLSAC G + M + + + + + S
Sbjct: 332 VQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR-HQLYLS 390
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
T LVD+ ++ G ++KA I + +P + + W +++
Sbjct: 391 VALGTSLVDMYAKCGNIKKAICIFKEIP-DKNALTWTAMI 429
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 135/293 (46%), Gaps = 30/293 (10%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
C +RL NA + + G + A+ +F+++ K V++W +I G+ + G ++
Sbjct: 256 RCTVRLM--------NAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMME 307
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFL 154
+++ LF MP +++ WN ++AG + N + +A F M E N T ++S
Sbjct: 308 DARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACS 367
Query: 155 KHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
+ G LE + + R +V T+++D + K G + KA + + KN ++WT
Sbjct: 368 QLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTA 427
Query: 211 MITGYVKNERFCEARELFYRMPDY----DKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
MI G + EA E F RM D D+ F+ +++ C G+++ R F +
Sbjct: 428 MICGLANHGHADEAIEYFQRMIDLGLQPDEITFI--GVLSACCHAGLVKEGRQFFSLMHE 485
Query: 267 K-----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
K ++ MI + G +EA +L + M M PD ++F AC
Sbjct: 486 KYHLERKMKHYSCMIDLLGRAGHLDEAEQLVN---TMPMDPDAVVWGALFFAC 535
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 123/296 (41%), Gaps = 48/296 (16%)
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+F A+ ++ V L L+ ++ +PD T + AC+ LQ G
Sbjct: 87 AFRALSLCPHRHLVDRHCLPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGH 146
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
V + GF A+V V NA + +S G ++ + F + + ++VSWNT+I + + G +A
Sbjct: 147 VQKLGFSADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREA 206
Query: 390 LIFFSQMGLNG--FDPDGITFLSLLSACGHAGKV----------------------NESM 425
L F ++ +G PD +T + +S C G + N M
Sbjct: 207 LELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVM 266
Query: 426 DLF------ELMVKVYGIIPSSE--HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
D++ EL V+ I + +T ++ +R G +E A + MP E D W
Sbjct: 267 DMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMP-ERDVFPWN 325
Query: 478 SLLAACVINLNVELGELAAKKMRE--LDPQNSAVYVMLSNLYAAA--------GMW 523
+L+A V N + +M+E +DP + + NL +A GMW
Sbjct: 326 ALMAGYVQNKQGKEAIALFHEMQESKVDPNE----ITMVNLLSACSQLGALEMGMW 377
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 288/523 (55%), Gaps = 34/523 (6%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----E 140
N ++ Y + G + +++ +F+ M V++ VSWN M++G N A + F+ M E
Sbjct: 174 NELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLE 233
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV--------------ISYTAMLDGFMK 186
N T+ +++S + G+ E LF +M R + + A +G +
Sbjct: 234 PNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVI 293
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
G V K +Y+ KN +I Y K+ AR LF + KN+ A+I+
Sbjct: 294 HGYVVKG-GFENYLFVKNS-----LICLYGKHGNVNAARILFLEIKT--KNIVSWNALIS 345
Query: 247 GFCKVGMLENARLLFERIQPKD--------CVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
+ +G + A +F +++ D VS++A+I G+A G EEAL LF M
Sbjct: 346 SYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLA 405
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++ + T+ SV + C+ L L+ GR+ H V+R+ + N+ V N +I MY++ G +
Sbjct: 406 KVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEG 465
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
L F +I + +L+SWNT++A + HG E A+ F QM +GF+PDG+TF+++LSAC HA
Sbjct: 466 NLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHA 525
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E +LF+ M+K + + P EHY C+VD+L RAG L++A ++ + MP E + VWG+
Sbjct: 526 GLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGA 585
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL +C ++ N E+ E A ++ L+ + + Y++LSN+YAA+G W D +VR+ K +G+
Sbjct: 586 LLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGL 645
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
K SWI++ KV+ F G+ H +++++ LK +QM+
Sbjct: 646 KKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQME 688
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 195/473 (41%), Gaps = 97/473 (20%)
Query: 17 FPPILR---ILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLF 73
FP ++R ++ + C + H ++ + + V N + + G++ AR++F
Sbjct: 138 FPLVIRACALMGSRKLCRSVHGH----VVEMGFQWNLHVGNELMGMYGKIGRMDDARKVF 193
Query: 74 DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNCMIAGCIDNDRID 129
++M + ++WN +++GY N + +F+ M N+V+W +++ +
Sbjct: 194 ERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHV 253
Query: 130 DAFDYFQAMPERNTATY---------------------------------------NAMI 150
+ + F M R N++I
Sbjct: 254 ETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLI 313
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL-------SDY-MSF 202
+ KHG + A LF ++ +N++S+ A++ + G D+A A+ +Y M
Sbjct: 314 CLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 373
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM------------------------------- 231
NVVSW+ +I G+ + EA ELF RM
Sbjct: 374 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 433
Query: 232 ------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
D N+ V +I + K G + L+FE+I+ KD +S+N M+AGY +G+
Sbjct: 434 HGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLG 493
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNA 344
E A+R F MIK +PD T V+V +ACS L+ EGR+ +I+ E +
Sbjct: 494 ENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYAC 553
Query: 345 VITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
++ + R G + ++ + + PN W ++ + H + E A SQ+
Sbjct: 554 MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQI 606
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 116/219 (52%), Gaps = 6/219 (2%)
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS----FNAMIAGYAQNGVAEEALRL 291
++ F+ +++ + G++ +A+ +FE + P +C S +N+++ +G EEAL +
Sbjct: 64 RSAFLAARVVSVYAGFGLVSDAQRVFE-VSPIECFSNLLLWNSILRANVAHGYCEEALEI 122
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+ M K+ + D T V AC+ + R H V+ GF+ N+ V N ++ MY +
Sbjct: 123 YCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGK 182
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G + D+ F ++ + VSWNT+++ +A + A F MG G +P+ +T+ SL
Sbjct: 183 IGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSL 242
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
LS+ G+ E+M+LF M ++ GI ++E ++ +
Sbjct: 243 LSSHARCGQHVETMELFGRM-RMRGIGATAEALAVVLSV 280
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 145/350 (41%), Gaps = 75/350 (21%)
Query: 128 IDDAFDYFQAMPER---NTATYNAMISGFLKHGRLEEATRLFEQMPRRN----------V 174
+ DA F+ P N +N+++ + HG EEA ++ +M + V
Sbjct: 82 VSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLV 141
Query: 175 ISYTAMLD---------------GFM--------------KKGEVDKARALSDYMSFKNV 205
I A++ GF K G +D AR + + M+ ++
Sbjct: 142 IRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSC 201
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
VSW M++GY N A E+F M ++
Sbjct: 202 VSWNTMVSGYALNYDCHGASEMFRMMGSAG----------------------------LE 233
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
P + V++ ++++ +A+ G E + LF M + L V + L +EG+
Sbjct: 234 P-NLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKV 292
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H V++ GFE + V N++I +Y + G + + + F +I + N+VSWN +I+++A G
Sbjct: 293 IHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGW 352
Query: 386 YEKALIFFSQMGLNG----FDPDGITFLSLLSACGHAGKVNESMDLFELM 431
++A F Q+ P+ +++ +++ G+ E+++LF M
Sbjct: 353 CDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRM 402
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 261/452 (57%), Gaps = 8/452 (1%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RA 195
E N +A++ + K + +A R+F+ M + + +S+T+++ GF K G +A +
Sbjct: 133 EDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKE 192
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP---DYDKNVFVVTAMITGFCKVG 252
+ N V++ +I+ E + L + + FVV+ +I + K G
Sbjct: 193 MLGSQIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCG 252
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
++ A LLF +D + FN+MI+GY+QN EEAL+LF M + P D TL S+
Sbjct: 253 RIDQAVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILN 312
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
AC +L +L +GRQ H LV + G E+NV V +A++ MYS+CG I ++ F Q N V
Sbjct: 313 ACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVL 372
Query: 373 WNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
W ++I +AQ G + L F ++ GF PD I F ++L+AC HAG +++ +D F M
Sbjct: 373 WTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQM 432
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
+ YG++P + Y CLVD+ R G L KA ++ + +P E ++ +WGS L++C + EL
Sbjct: 433 RRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAEL 492
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
G AA K+ +++P ++A YV ++++YA AG+W +V +R LMK++G+ K +SW+E+
Sbjct: 493 GREAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDK 552
Query: 552 KVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+VH FL D SHP I +EL+R +++MK V
Sbjct: 553 RVHVFLVADASHPRSRDICVELERLNLEMKEV 584
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 139/250 (55%), Gaps = 3/250 (1%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ N+F+ +A++ + K + +A+ +F+ ++ D VS+ ++I+G+++NG +EA+ F
Sbjct: 132 FEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFK 191
Query: 294 GMIKMDMQPDDATLVSVFTACSALQ-LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M+ ++P+ T VSV +AC+ L+ + ++ H V++ GF V + +I YS+C
Sbjct: 192 EMLGSQIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKC 251
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I + L F + + +N++I+ ++Q+ E+AL F +M NG +P T S+L
Sbjct: 252 GRIDQAVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSIL 311
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
+ACG + + + L+ K+ G + + L+D+ S+ G +++A + E +
Sbjct: 312 NACGSLTILQQGRQVHSLVAKM-GSESNVFVVSALLDMYSKCGSIDEA-RCVFDQAVEKN 369
Query: 473 TGVWGSLLAA 482
T +W S++
Sbjct: 370 TVLWTSMITG 379
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 125/240 (52%), Gaps = 9/240 (3%)
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
A++ EAL F M +P L + +C+ L G Q H +I+ GFE N+
Sbjct: 77 AKHANVREALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL 136
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
+ +A++ +Y++C I+D++ F + + VSW +II+ F+++G ++A++FF +M +
Sbjct: 137 FLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 196
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
P+ +T++S++SAC + + L V G + +CL+D S+ G++++
Sbjct: 197 QIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQ 256
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAK---KMRE--LDPQNSAVYVMLS 514
A + G E D ++ S+++ NL GE A K +MR L+P + + +L+
Sbjct: 257 A-VLLFGTTIERDNILFNSMISGYSQNL---FGEEALKLFVEMRNNGLNPTDHTLTSILN 312
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 144/364 (39%), Gaps = 90/364 (24%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES----KNLFQ 105
+F+N+A + ++ I A+++FD M D ++W +II+G+ +NG +E+ K +
Sbjct: 136 LFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLG 195
Query: 106 SMPVKNIVSWNCMIAGCIDND------------------------------------RID 129
S N V++ +I+ C + RID
Sbjct: 196 SQIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRID 255
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM-------------------- 169
A F ER+ +N+MISG+ ++ EEA +LF +M
Sbjct: 256 QAVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACG 315
Query: 170 -------------------PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
NV +A+LD + K G +D+AR + D KN V WT
Sbjct: 316 SLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTS 375
Query: 211 MITGYVKNERFCEARELFYRM---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP- 266
MITGY ++ R E LF R+ + + TA++T G L+ F +++
Sbjct: 376 MITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRD 435
Query: 267 ----KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
D + ++ Y +NG +A L M + +P+ S ++C
Sbjct: 436 YGLVPDLDQYACLVDLYVRNGHLRKAKEL---MEAIPCEPNSVMWGSFLSSCKLYGEAEL 492
Query: 323 GRQS 326
GR++
Sbjct: 493 GREA 496
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 16 LFPPILRILSTPDSCGNFT-----PHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAAR 70
L P + S ++CG+ T + + ++ S VFV +A + S+ G I AR
Sbjct: 300 LNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEAR 359
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK-----NIVSWNCMIAGCIDN 125
+FDQ K+ + W ++ITGY Q+G E LF+ + + + + + ++ C
Sbjct: 360 CVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHA 419
Query: 126 DRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTA 179
+D DYF M + Y ++ ++++G L +A L E +P N + + +
Sbjct: 420 GFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGS 479
Query: 180 MLDGFMKKGEVDKARALSDYM 200
L GE + R +D +
Sbjct: 480 FLSSCKLYGEAELGREAADKL 500
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 195/605 (32%), Positives = 320/605 (52%), Gaps = 40/605 (6%)
Query: 5 SYFHQTYLKR-ILFPPILRILSTPDSCGNFTPHSSNCLIRLFS---TQYVFVNNAKISAL 60
S H LK I P ++I S + G+ +IR+FS TQ + ++ + +
Sbjct: 29 SQAHAHILKTGISLPETIQIFSKLNHFGH--------VIRVFSYMLTQGIVPDSRVLPTV 80
Query: 61 SRAGKISAARQLFDQMTT--------KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+ +A Q QM D + ++++ Y Q L++++N+F +P +
Sbjct: 81 IKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGV 140
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V+ + +I+ R+ + + F E N ++N MISGF + G +A +F+
Sbjct: 141 VTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQN 200
Query: 169 MPRR----------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
M +V+ LD + ++ K VVS +I Y K
Sbjct: 201 MHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVS--ALIDMYGKC 258
Query: 219 ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD--CVSFNAMI 276
E +F M + D V A++TG + G+++NA +F++ + D VS+ +MI
Sbjct: 259 ACASEMSGVFNEMDEVD--VGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMI 316
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
A +QNG EAL LF M ++P+ T+ + AC + L G+ +H +RNG
Sbjct: 317 ASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIF 376
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+V V +A+I MY++CG +L S L F + + NLVSWN+++A +A HG +A+ F M
Sbjct: 377 NDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELM 436
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G PD ++F +LSAC G E F+ M + +G+ EHY+C+V +L R+G+
Sbjct: 437 QRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGR 496
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
LE+A+ + + MPFE D+ VWG+LL++C ++ V+LGE+AAK++ EL+P+N Y++LSN+
Sbjct: 497 LEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNI 556
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
YA+ MW +V VR +M+ +G+ K YSWIEI NKVH L GD SHP + +I +L +
Sbjct: 557 YASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKL 616
Query: 577 SVQMK 581
+V+MK
Sbjct: 617 TVEMK 621
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 270/472 (57%), Gaps = 13/472 (2%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
M A C RI+ A + F M R+ T+N MI + + G ++EA +LFE+M NV+
Sbjct: 155 MYASC---GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 178 TAMLDGFM----KKGEVDKARALSDYMSFKNVVS----WTVMITGYVKNERFCEARELFY 229
+L + + G + RA+ +++ +V T ++T Y ARE F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+M +N+FV TAM++G+ K G L++A+++F++ + KD V + MI+ Y ++ +EAL
Sbjct: 272 KMSV--RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEAL 329
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
R+F M ++PD ++ SV +AC+ L +L++ + H + NG E+ +S+ NA+I MY
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++CGG+ + F ++ N+VSW+++I A + HG AL F++M +P+ +TF+
Sbjct: 390 AKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
+L C H+G V E +F M Y I P EHY C+VD+ RA L +A ++ + MP
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV 509
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
++ +WGSL++AC I+ +ELG+ AAK++ EL+P + V++SN+YA W DV +
Sbjct: 510 ASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNI 569
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
R +M+E+ V K+ S I+ K H FL GD H ++I+ +L ++K
Sbjct: 570 RRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLK 621
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 191/410 (46%), Gaps = 49/410 (11%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV + + G+I+ AR +FD+M+ +DV+TWN +I Y + G + E+ LF+ M
Sbjct: 147 FVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDS 206
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--------RNTATYNAMISGFLKHGRLEEA 162
N++ ++ + Y +A+ E +T A+++ + G ++ A
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA 266
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
F +M RN+ TAM+ G+ K G +D A+ + D K++V WT MI+ YV+++
Sbjct: 267 REFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQ 326
Query: 223 EARELFYRM------PD----------------YDKNVFVVT---------------AMI 245
EA +F M PD DK +V + A+I
Sbjct: 327 EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALI 386
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K G L+ R +FE++ ++ VS+++MI + +G A +AL LF+ M + +++P++
Sbjct: 387 NMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEV 446
Query: 306 TLVSVFTACSALQLLNEGRQSHV-LVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFR 363
T V V CS L+ EG++ + + ++ ++ R + ++ E+
Sbjct: 447 TFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIES 506
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ N+V W ++++A HG E L F+ + +PD L L+S
Sbjct: 507 MPVASNVVIWGSLMSACRIHGELE--LGKFAAKRILELEPDHDGALVLMS 554
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 128/275 (46%), Gaps = 33/275 (12%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
FV T + + G + AR +F+ + +D V++N MI Y + G+ +EA +LF M
Sbjct: 147 FVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDS 206
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM---------- 348
++ PD+ L ++ +AC + R + +I N + + A++TM
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA 266
Query: 349 ---------------------YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
YS+CG + D+++ F Q +LV W T+I+A+ + + +
Sbjct: 267 REFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQ 326
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+AL F +M +G PD ++ S++SAC + G ++++ + V G+ L
Sbjct: 327 EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNAL 385
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+++ ++ G L+ + + MP + W S++ A
Sbjct: 386 INMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINA 419
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 141/285 (49%), Gaps = 23/285 (8%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
R S + +FV+ A +S S+ G++ A+ +FDQ KD++ W +I+ Y ++ + QE+
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 103 LFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFL 154
+F+ M ++VS +I+ C + +D A + E + NA+I+ +
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA 390
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTV 210
K G L+ +FE+MPRRNV+S+++M++ GE A +L M +NV V++
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGF-CKVGMLENARLLFERIQPKDC 269
++ G + E +++F M D + +T + + C V + A LL E ++ +
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDE----YNITPKLEHYGCMVDLFGRANLLREALEVIES 506
Query: 270 --VSFNAMIAGYAQNGV---AEEALRLFSGMIKMDMQPD-DATLV 308
V+ N +I G + E L F+ ++++PD D LV
Sbjct: 507 MPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALV 551
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 94/202 (46%), Gaps = 1/202 (0%)
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
P + + FN + +++ + + + + + D + + + A S + L EG +
Sbjct: 73 PPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H + + + V + MY+ CG I + F ++ ++V+WNT+I + + G
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL 192
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
++A F +M + PD + +++SACG G + + ++E +++ + + T
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE-NDVRMDTHLLT 251
Query: 446 CLVDILSRAGQLEKAWQITQGM 467
LV + + AG ++ A + + M
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKM 273
>gi|223948849|gb|ACN28508.1| unknown [Zea mays]
gi|413937254|gb|AFW71805.1| hypothetical protein ZEAMMB73_337002 [Zea mays]
Length = 608
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 274/508 (53%), Gaps = 27/508 (5%)
Query: 104 FQSMPVKNIVSWNCMIAGCIDN-DRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLE 160
F +P KN S+N ++A + D + DAF F MP RN +YN ++S HGR
Sbjct: 90 FYDLPHKNAHSYNTLLAALLRRPDTLPDAFRLFDTMPADSRNLVSYNTLMSSLAHHGRQV 149
Query: 161 EATRLFEQMPRRNVISYTAMLDGFM------KKGEVDKARALSDY--------MSFKNVV 206
EA R+ ++ R + +D F + AR L + M F V+
Sbjct: 150 EALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIGAARPLREMHGAVVVSGMEF-TVI 208
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
M+ Y K R +AR LF ++ D + T+MI+G+C+V L A +F+ +
Sbjct: 209 MANAMLNAYSKARRVEDARHLFDQVSIRDNVTW--TSMISGYCQVKKLHEAVQVFDMMPD 266
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
KD +++ A+I+G+ QNG + AL LF M+ + P LVS AC+ L L+ G++
Sbjct: 267 KDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLVTRGKEL 326
Query: 327 HVLVIRNGFEA---NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
H ++R + N+ + NA++ MYS+CG ++ + F + + +SWN+++ F+ +
Sbjct: 327 HCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHN 386
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +++L F +M + G P +TFL++L+AC H+G V+ + E M + +G+ P +EH
Sbjct: 387 GLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLVLESM-EDHGVEPRAEH 445
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFE---ADTGVWGSLLAACVINLNVELGELAAKKMR 500
Y +D L R QLE+A + + +P G WG+LL AC ++ N+EL E A+ +
Sbjct: 446 YAAFIDALGRNHQLEEATEFIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEEVAEFLF 505
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
L+P NS YVM+SN+YAAAG W D RVR LMKE+G+ K AYSWIE+ + H F+ D
Sbjct: 506 RLEPGNSGRYVMMSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWIEVRSAKHVFVADD 565
Query: 561 MSHPCIDKIHLELKRASVQMKSVDDFVE 588
+SH DKI+ L + M +D E
Sbjct: 566 ISHCEADKIYEMLGKLLDHMSVAEDPTE 593
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 19/257 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + NA ++A S+A ++ AR LFDQ++ +D +TW ++I+GY Q L E+ +F MP
Sbjct: 207 VIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPD 266
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN-TATYNAMISGFLKHGRLEEATRLFEQ 168
K+ ++W +I+G N D A + F+ M + + T ++S +L TR E
Sbjct: 267 KDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLVTRGKEL 326
Query: 169 ---MPRRNVIS-------YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
+ RRN+ S + A++D + K G++ A A+ D+M ++ +SW M+TG+ N
Sbjct: 327 HCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHN 386
Query: 219 ERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFER-----IQPKDCVS 271
++ +F M VT A++T G++ N RL+ E ++P+
Sbjct: 387 GLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLVLESMEDHGVEPR-AEH 445
Query: 272 FNAMIAGYAQNGVAEEA 288
+ A I +N EEA
Sbjct: 446 YAAFIDALGRNHQLEEA 462
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 171/491 (34%), Positives = 278/491 (56%), Gaps = 15/491 (3%)
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATYNAMISGFLK 155
N F S P NI ++N ++ ++ YF P + T+ +++
Sbjct: 82 NHFLSFP--NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG 139
Query: 156 HGRLEEATRLFEQMPR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
++ E ++ + + N+ +++D + K G A+ L D M ++VVSW +
Sbjct: 140 LAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTL 199
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
I+GY + +AR +F M +KN+ + MI+G+ +VG LE AR LFE + ++ VS
Sbjct: 200 ISGYCFSGMVDKARMVFDGM--MEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVS 257
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+NAMIAGYAQN +A+ LF M + + P+D TLVSV +AC+ L L+ G+ H +
Sbjct: 258 WNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFI 317
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
RN E + + NA+ MY++CG +L+++ F ++H +++SW+ II A +G+ +A
Sbjct: 318 RRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAF 377
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
FF++M +G +P+ I+F+ LL+AC HAG V++ ++ F++M +VYGI P EHY C+VD+
Sbjct: 378 NFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDL 437
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
LSRAG+L++A + MP + + VWG+LL C I + E GE ++ ELD +S
Sbjct: 438 LSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSL 497
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V L+N+YA+ G D RL M++ K SWIEI N V+ F GD SHP +I+
Sbjct: 498 VYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIY 557
Query: 571 LELKRASVQMK 581
++ +MK
Sbjct: 558 SMIRELKWKMK 568
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 178/388 (45%), Gaps = 42/388 (10%)
Query: 5 SYFH-QTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKIS 58
SYF+ Q L P S +C + F T+Y +FV N+ +
Sbjct: 111 SYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVD 170
Query: 59 ALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCM 118
+ G A++LFD+M +DV++WN +I+GY +G + +++ +F M KN+VSW+ M
Sbjct: 171 LYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTM 230
Query: 119 IAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR-----N 173
I+G +++A F+ MP RN ++NAMI+G+ ++ + +A LF QM N
Sbjct: 231 ISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPN 290
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
++ ++L G +D + W F R
Sbjct: 291 DVTLVSVLSACAHLGALDLGK-------------WI----------------HRFIRRNK 321
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ +F+ A+ + K G + A+ +F + +D +S++ +I G A G A EA F+
Sbjct: 322 IEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFA 381
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRC 352
MI+ ++P+D + + + TAC+ L+++G + ++ + G + V+ + SR
Sbjct: 382 EMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRA 441
Query: 353 GGILDSELAFRQIH-SPNLVSWNTIIAA 379
G + +E + PN++ W ++
Sbjct: 442 GRLDQAESLINSMPMQPNVIVWGALLGG 469
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 274/490 (55%), Gaps = 15/490 (3%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N +I Y + G ++ +F M ++N+ SWN M++G + + + A F +MPER+
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVV 145
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARA----- 195
++N M+ G+ + G L EA F+++ R N S+ +L +K ++ +
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQV 205
Query: 196 -LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
++ ++S NVV +I Y K + A+ F M K++ + T +I+G+ K+G +
Sbjct: 206 LVAGFLS--NVVLSCSIIDAYAKCGQMESAKRCFDEMTV--KDIHIWTTLISGYAKLGDM 261
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E A LF + K+ VS+ A+IAGY + G + AL LF MI M ++P+ T S A
Sbjct: 262 EAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCAS 321
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLVSW 373
+++ L G+Q H +IR N V +++I MYS+ G + SE FR + + V W
Sbjct: 322 ASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLW 381
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
NT+I+A AQHG KAL M P+ T + +L+AC H+G V E + FE M
Sbjct: 382 NTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSGLVEEGVRWFESMTV 441
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+GI+P EHY CL+D+L RAG ++ + MPFE D +W ++L C I+ N ELG+
Sbjct: 442 QHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMPFEPDKHIWNAILGVCRIHGNEELGK 501
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
AA+++ +LDP++SA Y++LS++YA G W V ++R +MK++ V K+ A SWIEI NKV
Sbjct: 502 KAAEELIKLDPESSAPYILLSSIYADHGKWELVEKLRGIMKKRRVNKEKAVSWIEIENKV 561
Query: 554 HYFLGGDMSH 563
F D SH
Sbjct: 562 KAFTVSDGSH 571
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 210/479 (43%), Gaps = 99/479 (20%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F ++N I + GK A ++FDQM +++ +WN +++G+ ++G L ++ +F
Sbjct: 77 FKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVVF 136
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN----------------- 147
SMP +++VSWN M+ G + + +A +F+ + R+ +N
Sbjct: 137 DSMPERDVVSWNTMVIGYAQDGNLHEALWFFKEL-RRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 148 ---------AMISGFL--------------KHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+++GFL K G++E A R F++M +++ +T ++ G+
Sbjct: 196 QLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGY 255
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------- 231
K G+++ A L M KN VSWT +I GYV+ A +LF +M
Sbjct: 256 AKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFS 315
Query: 232 ------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERI--Q 265
+ N V +++I + K G LE + +F RI
Sbjct: 316 SCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVF-RICYD 374
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-R 324
+DCV +N MI+ AQ+G+ +AL++ MIK + P+ TLV + ACS L+ EG R
Sbjct: 375 KQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSGLVEEGVR 434
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILD-----SELAFRQIHSPNLVSWNTIIAA 379
+ +++G + +I + R G + E+ F P+ WN I+
Sbjct: 435 WFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMPF----EPDKHIWNAILGV 490
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
HG+ E L + L DP+ LLS+ + +EL+ K+ GI+
Sbjct: 491 CRIHGNEE--LGKKAAEELIKLDPESSAPYILLSS------IYADHGKWELVEKLRGIM 541
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 297/557 (53%), Gaps = 24/557 (4%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q + V+ A SA +R G + A+++FD+ +DV++WNA++ Y Q+G + E+ LF M
Sbjct: 258 QTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317
Query: 108 -----PVKNIVSWNCMIAGC--IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
P + N GC + R+ A + + +R+ NA++ + + G E
Sbjct: 318 LHEGIPPSKVTLVNAST-GCSSLRFGRMIHACALEKGL-DRDIVLGNALLDMYTRCGSPE 375
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGYV 216
EA LFE +P N +S+ M+ G +KG++ +A L M + + ++ ++
Sbjct: 376 EARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVA 434
Query: 217 KNER----FCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFER---IQPK 267
N E R+L R+ Y + TA++ + G ++ A F+R
Sbjct: 435 SNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRH 494
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D VS+NA+I+ +Q+G + AL F M + P+ T V+V AC+ L EG H
Sbjct: 495 DVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVH 554
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHY 386
+ +G E+NV V A+ +MY RCG + + F ++ ++V +N +IAA++Q+G
Sbjct: 555 DHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLA 614
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
+AL F +M G PD +F+S+LSAC H G +E ++F M + YGI PS +HY C
Sbjct: 615 GEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYAC 674
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
VD+L RAG L A ++ + M + VW +LL AC +V+ G LA +RELDP +
Sbjct: 675 AVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGD 734
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
+ YV+LSN+ A AG W + VR M+ +G+ KQ SWIEI ++VH F+ GD SHP
Sbjct: 735 ESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRS 794
Query: 567 DKIHLELKRASVQMKSV 583
++I+ EL+R +++ +
Sbjct: 795 EEIYRELERLHAEIREI 811
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 224/439 (51%), Gaps = 28/439 (6%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVSWNC 117
G +++A LF++M +D+++WNA I Q+G L + LFQ M P + +
Sbjct: 177 GCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITL 235
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
+ I R + ++ E+ A+ S + + G L++A +F++ R+V+S+
Sbjct: 236 SVCAKIRQARAIHSI-VRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSW 294
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------ 231
AML + + G + +A L M + + V + V C + F RM
Sbjct: 295 NAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL---VNASTGCSSLR-FGRMIHACAL 350
Query: 232 -PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
D+++ + A++ + + G E AR LFE I P + VS+N MIAG +Q G + AL
Sbjct: 351 EKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI-PGNAVSWNTMIAGSSQKGQMKRALE 409
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSA----LQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
LF M M P AT +++ A ++ + + EGR+ H ++ G+ + ++ AV+
Sbjct: 410 LFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVV 469
Query: 347 TMYSRCGGILDSELAFRQ---IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
MY+ CG I ++ +F++ ++VSWN II++ +QHGH ++AL FF +M L+G P
Sbjct: 470 KMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAP 529
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ IT +++L AC A + E + + + ++ G+ + T L + R G LE A +I
Sbjct: 530 NQITCVAVLDACAGAAALTEGVIVHD-HLRHSGMESNVFVATALASMYGRCGSLESAREI 588
Query: 464 TQGMPFEADTGVWGSLLAA 482
+ + E D ++ +++AA
Sbjct: 589 FEKVAVERDVVIFNAMIAA 607
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 179/356 (50%), Gaps = 18/356 (5%)
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI---------VSWNCMIAG 121
++F ++ +D +W IIT Y ++G + + +F M + + V C G
Sbjct: 83 EVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLG 142
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
+ R A+ ++ E + N ++ + G + A LFE+M R +++S+ A +
Sbjct: 143 DLSQGRSIHAW-IVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMER-DLVSWNAAI 200
Query: 182 DGFMKKGEVDKARALSDYMSFKNV--VSWTVMITGYVKNE-RFCEARELFYRMPDYDKNV 238
+ G++D A L M + V T++IT V + R A R ++ +
Sbjct: 201 AANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTL 260
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
V TA+ + + ++G L+ A+ +F+R +D VS+NAM+ YAQ+G EA LF+ M+
Sbjct: 261 VVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE 320
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ P TLV+ T CS+L+ GR H + G + ++ + NA++ MY+RCG ++
Sbjct: 321 GIPPSKVTLVNASTGCSSLRF---GRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEA 377
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
F I N VSWNT+IA +Q G ++AL F +M L G P T+L+LL A
Sbjct: 378 RHLFEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 177/369 (47%), Gaps = 59/369 (15%)
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAML 181
+ + D + F + R+ A++ +I+ + +HG+ + A +F +M + V +++ A+L
Sbjct: 76 ESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVL 135
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
+ G++ + R++ +W V E E + + N+ +
Sbjct: 136 KACARLGDLSQGRSIH---------AWIV--------ESGLEGKSVL-------ANLLL- 170
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
I G C G + +A LLFER++ +D VS+NA IA AQ+G + AL LF M ++
Sbjct: 171 --HIYGSC--GCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVR 225
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P TLV + C+ ++ + R H +V +G E + V A+ + Y+R G + ++
Sbjct: 226 PARITLVITLSVCAKIR---QARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEV 282
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG----- 416
F + ++VSWN ++ A+AQHGH +A + F++M G P +T ++ + C
Sbjct: 283 FDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRFG 342
Query: 417 ---HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
HA + + +D ++ L+D+ +R G E+A + +G+P A +
Sbjct: 343 RMIHACALEKGLDRDIVL------------GNALLDMYTRCGSPEEARHLFEGIPGNAVS 390
Query: 474 GVWGSLLAA 482
W +++A
Sbjct: 391 --WNTMIAG 397
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 6/235 (2%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K L + +F R++ +D S+ +I Y ++G A+ A+ +F M + ++ D T
Sbjct: 72 YLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTF 131
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
++V AC+ L L++GR H ++ +G E + N ++ +Y CG + + L F ++
Sbjct: 132 LAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMER 191
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+LVSWN IAA AQ G + AL F +M L G P IT + LS C K+ ++ +
Sbjct: 192 -DLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVC---AKIRQARAI 247
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ V+ G+ + T L +R G L++A ++ E D W ++L A
Sbjct: 248 HSI-VRESGLEQTLVVSTALASAYARLGHLDQAKEVFD-RAAERDVVSWNAMLGA 300
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
A LV + A +LL++GR+ H ++ G E + N ++ +Y +C + D E F +
Sbjct: 30 AHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSR 87
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ + SW TII A+ +HG ++A+ F +M G D +TFL++L AC G +++
Sbjct: 88 LEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+ +V+ G+ S L+ I G + A + + M E D W + +AA
Sbjct: 148 RSIHAWIVE-SGLEGKSVLANLLLHIYGSCGCVASAMLLFERM--ERDLVSWNAAIAA-- 202
Query: 485 INLNVELGEL 494
N + G+L
Sbjct: 203 ---NAQSGDL 209
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 274/506 (54%), Gaps = 25/506 (4%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
A +S S A I A +F ++ + WN II Y + + + +F M
Sbjct: 47 ASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQM------- 99
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
+ + D + + A+ ++ +++ + G HG + + T L + + +N
Sbjct: 100 --------LHASVLPDKYTFTFAL--KSCGSFSGVEEGRQIHGHVLK-TGLGDDLFIQNT 148
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
+ + + G ++ AR L D M ++VVSW +++ Y + A LF M +
Sbjct: 149 LIHL-----YASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTE- 202
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+NV MI+G+ VG+LE AR +F K+ VS+NAMI GY+ G E L LF
Sbjct: 203 -RNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFED 261
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M ++PD+ TLVSV +AC+ + L++G H + +NG + V A++ MYS+CG
Sbjct: 262 MQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGS 321
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I + F ++ +WN+II+ + HG + AL FS+M + GF P+ +TF+ +LSA
Sbjct: 322 IEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSA 381
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C AG ++E ++F LMV V+GI P+ EHY C+VD+L R G LE+A ++ Q MP + +
Sbjct: 382 CSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASV 441
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VW SLL AC + NVEL E A+K+ EL PQ S+ +V LSN+YA+ G W+DV VR M+
Sbjct: 442 VWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMR 501
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGD 560
QGV K S IE+ V+ FL G+
Sbjct: 502 AQGVRKDPGCSMIEVDGTVYEFLAGE 527
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 170/346 (49%), Gaps = 35/346 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N I + G I AR L D+M +DV++WNA+++ Y + G ++ + +LF M
Sbjct: 143 LFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTE 202
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+N+ SWN MI+G + +++A F P +N ++NAMI+G+ GR E LFE M
Sbjct: 203 RNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDM 262
Query: 170 PRRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
V + ++L G + + + Y+ KN +S I G
Sbjct: 263 QHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYID-KNGIS----IDG----------- 306
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
FV TA++ + K G +E A +F KD ++N++I+G + +G
Sbjct: 307 -------------FVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSG 353
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNA 344
+ AL++FS M+ +P++ T V V +ACS LL+EGR+ L++ +G + +
Sbjct: 354 QHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGC 413
Query: 345 VITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
++ + R G + ++ EL + V W +++ A HG+ E A
Sbjct: 414 MVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELA 459
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 8/213 (3%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCN---AVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
++E Q+H ++++G + + A ++ S I + F +I +PN WNTI
Sbjct: 20 ISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTI 79
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I A+A E AL F QM PD TF L +CG V E + ++K G
Sbjct: 80 IRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKT-G 138
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
+ L+ + + G +E A + M E D W +LL+A L ELA
Sbjct: 139 LGDDLFIQNTLIHLYASCGCIEDARHLLDRM-LERDVVSWNALLSAYA---ERGLMELAC 194
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
E+ +N + + + Y G+ + RV
Sbjct: 195 HLFDEMTERNVESWNFMISGYVGVGLLEEARRV 227
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/556 (30%), Positives = 301/556 (54%), Gaps = 35/556 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ I A S G I+ ARQ+FD + + WNAII GY +N Q++ ++ +M +
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLA 113
Query: 111 NI----VSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ ++ ++ C + R A F+ + + N +I+ + K RL
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHA-QVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 162 ATRLFE--QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV-VSWTVMITGYVKN 218
A +FE +P R ++S+TA++ + + GE +A + M +V W +++ V N
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVS--VLN 230
Query: 219 ERFC-----EARELFYRM--------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
C + R + + PD ++ ++ T + K G + A++LF++++
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPD------LLISLNTMYAKCGQVATAKILFDKMK 284
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+ + +NAMI+GYA+NG A EA+ +F MI D++PD ++ S +AC+ + L + R
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+ V R+ + +V + +A+I M+++CG + + L F + ++V W+ +I + HG
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGR 404
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+A+ + M G P+ +TFL LL AC H+G V E F M + I P +HY
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYA 463
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C++D+L RAG L++A+++ + MP + VWG+LL+AC + +VELGE AA+++ +DP
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS 523
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
N+ YV LSNLYAAA +W V VR+ MKE+G+ K SW+E+ ++ F GD SHP
Sbjct: 524 NTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPR 583
Query: 566 IDKIHLELKRASVQMK 581
++I +++ ++K
Sbjct: 584 YEEIERQVEWIESRLK 599
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+++A I ++ G + AR +FD+ +DV+ W+A+I GY +G +E+ +L+++M
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 110 ----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEE 161
N V++ ++ C + + + + +F M + Y +I + G L++
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 162 ATRLFEQMP-RRNVISYTAMLDGFMKKGEVD 191
A + + MP + V + A+L K V+
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+Q H ++ G + + + +I S G I + F + P + WN II ++++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
H++ AL+ +S M L PD TF LL AC +G + M F + +V+ + ++
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKAC--SGLSHLQMGRF-VHAQVFRLGFDADV 154
Query: 444 YT--CLVDILSRAGQLEKAWQITQGMPFEADTGV-WGSLLAACVINLNVELGELAAKKMR 500
+ L+ + ++ +L A + +G+P T V W ++++A N +MR
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 501 ELD 503
++D
Sbjct: 215 KMD 217
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 295/562 (52%), Gaps = 37/562 (6%)
Query: 46 STQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQ 105
++ VFV+ A ++ + G I A+ +FD+M ++ ++W A++ GY QE+ LF+
Sbjct: 149 ASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFR 208
Query: 106 SMPVKNIVSWNCMIAGCI----------------DNDRIDDAFDYFQAMPERNTATYNAM 149
M + + N +A + + D F + N++
Sbjct: 209 QMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGF-------VSVENSL 261
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
++ + K G ++ A +FE RN I+++AM+ G+ + G + A + M
Sbjct: 262 VTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTE 321
Query: 210 VMITGYVKNERFC----------EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
+ G + C +A L ++ ++ V+V +A++ + K G + +A+
Sbjct: 322 FTLVGVLNA---CSDVGTLMEGKQAHGLMVKL-GFEVQVYVKSALVDMYAKCGCIGDAKE 377
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
F + D V + AM+ G+ QNG E+AL L++ M K + P+ T+ S+ AC+ L
Sbjct: 378 CFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAA 437
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L G+Q H +++ GF SV +A+ TMYS+CG + D + FR++ ++++WN+II+
Sbjct: 438 LEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISG 497
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
F+Q+G A+ F +M L G PD +TF+++L AC H G V+ F M+K YG+ P
Sbjct: 498 FSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTP 557
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HY C+VDILSRAG L +A + + + T +W +L AC + ++G A +K+
Sbjct: 558 RLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKL 617
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
+L +SA Y++LSN+YAA W DV RVR LMK GV+K SW+E+ ++VH F+ G
Sbjct: 618 MDLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVG 677
Query: 560 DMSHPCIDKIHLELKRASVQMK 581
+ HP + I+ EL+R MK
Sbjct: 678 EQQHPDAEIINTELRRLGKHMK 699
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 226/484 (46%), Gaps = 56/484 (11%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY--WQNGFLQESKNLFQSMP 108
F+ + + ++ R G+ A L ++ ++ N++IT Y + FL + +F +P
Sbjct: 18 FIEHLRRASRPRDGEALHAWALKSGSSSHAPVS-NSLITFYSSFPRLFLPAAFAVFADIP 76
Query: 109 V--KNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAMISGFLKHGRL 159
+++ SWN ++ + + R A +F++M P ++ +
Sbjct: 77 AAARDVASWNSLL-NPLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASA 135
Query: 160 EEATRLFE-QMPR--RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
++P NV TA+L+ + K G + A+ + D M +N VSW M+ GY
Sbjct: 136 GAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYA 195
Query: 217 KNERFCEARELFYRMP---DYDKNVFVVTA------------------------------ 243
+ EA ELF +M KN FV TA
Sbjct: 196 ARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFV 255
Query: 244 -----MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
++T + K G ++ A +FE + ++ ++++AMI GY+QNG AE A+R+FS M
Sbjct: 256 SVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAA 315
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
P + TLV V ACS + L EG+Q+H L+++ GFE V V +A++ MY++CG I D+
Sbjct: 316 GFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDA 375
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+ F Q ++V W ++ Q+G +E+AL+ +++M G P+ +T SLL AC
Sbjct: 376 KECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGL 435
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ L ++K +G + + L + S+ G LE + + MP D W S
Sbjct: 436 AALEPGKQLHTQILK-FGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHR-DVIAWNS 493
Query: 479 LLAA 482
+++
Sbjct: 494 IISG 497
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 141/262 (53%), Gaps = 3/262 (1%)
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
++P NVFV TA++ +CK+G++ +A+L+F+ + ++ VS+ AM+AGYA ++EA
Sbjct: 145 KLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAF 204
Query: 290 RLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
LF M+ + + ++ +V +A S L G Q H LV+++G VSV N+++TM
Sbjct: 205 ELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTM 264
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y++ G + + F N ++W+ +I ++Q+G+ E A+ FSQM GF P T
Sbjct: 265 YAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTL 324
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+ +L+AC G + E LMVK+ G + LVD+ ++ G + A +
Sbjct: 325 VGVLNACSDVGTLMEGKQAHGLMVKL-GFEVQVYVKSALVDMYAKCGCIGDAKECFNQFS 383
Query: 469 FEADTGVWGSLLAACVINLNVE 490
E D +W +++ V N E
Sbjct: 384 -ELDIVLWTAMVTGHVQNGEFE 404
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 96/203 (47%), Gaps = 14/203 (6%)
Query: 17 FPP----ILRILSTPDSCGNFT--PHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAAR 70
FPP ++ +L+ G + +++L V+V +A + ++ G I A+
Sbjct: 317 FPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAK 376
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDND 126
+ F+Q + D++ W A++TG+ QNG +++ L+ M + N ++ ++ C
Sbjct: 377 ECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLA 436
Query: 127 RIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD 182
++ + + + +A+ + + K G LE+ +F +MP R+VI++ +++
Sbjct: 437 ALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIIS 496
Query: 183 GFMKKGEVDKARALSDYMSFKNV 205
GF + G + A L + M +
Sbjct: 497 GFSQNGRGNDAINLFEEMKLEGT 519
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/554 (31%), Positives = 288/554 (51%), Gaps = 69/554 (12%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA-GCIDNDR 127
A +FD + ++ WN + G+ S PV + + CM++ G + N
Sbjct: 56 AISVFDTIQEPXLLIWNTMFRGH-----------ALSSDPVSALKLYVCMVSLGLLPNSY 104
Query: 128 I----------DDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEEATRLFEQM 169
AF Q + + + + ++IS ++++GRLE+A ++ ++
Sbjct: 105 TFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKS 164
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
R+V+SYTA++ G+ +G ++ A + D + K+VVSW I+GY + + EA ELF
Sbjct: 165 SHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFK 224
Query: 230 RM------PD-------------------------------YDKNVFVVTAMITGFCKVG 252
+M PD + N+ +V A+I + K G
Sbjct: 225 KMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCG 284
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
LE A LF+ + KD +S+N +I GY + +EAL LF M++ +P+D T++S+ +
Sbjct: 285 ELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILS 344
Query: 313 ACSALQLLNEGRQSHVLVIR--NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
AC+ L ++ GR HV + + G S+ ++I MY++CG I ++ F + + +L
Sbjct: 345 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
SWN +I FA HG A FS+M NG +PD ITF+ LLSAC H+G ++ +F
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M + Y ++P EHY C++D+ +G ++A ++ M E D +W SLL AC ++ NVE
Sbjct: 465 MTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVE 524
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
LGE A+ + +++P+N YV+LSN+YA A W +V + R L+ ++G+ K S IEI
Sbjct: 525 LGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEID 584
Query: 551 NKVHYFLGGDMSHP 564
+ VH F+ GD HP
Sbjct: 585 SVVHEFIIGDKFHP 598
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 203/452 (44%), Gaps = 82/452 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++++ + IS + G++ A+++ D+ + +DV+++ A+ITGY G ++ + +F +PV
Sbjct: 138 LYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPV 197
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
K++VSWN I+G + +A + F+ M + N +T ++S + G +E ++
Sbjct: 198 KDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQV 257
Query: 166 FEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ A++D + K GE++ A L +S K+V+SW +I GY +
Sbjct: 258 HSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLY 317
Query: 222 CEARELFYRM------PD--------------------------YDKNVFVV-------T 242
EA LF M P+ DK + V T
Sbjct: 318 KEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 377
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A+ +F+ + + S+NAMI G+A +G A A +FS M K ++P
Sbjct: 378 SLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 437
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD T V + +ACS +L+ GR + R D +L
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRHIFRSMTR------------------------DYKLM- 472
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
P L + +I G +++A + M + +PDG+ + SLL AC G V
Sbjct: 473 -----PKLEHYGCMIDLXGHSGLFKEAEKMINTMEM---EPDGVIWCSLLKACKMHGNVE 524
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+ ++K+ P S Y L +I + A
Sbjct: 525 LGESYAQNLIKIEPENPGS--YVLLSNIYATA 554
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/455 (33%), Positives = 268/455 (58%), Gaps = 7/455 (1%)
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE-VDKA 193
Q++ + N +++ + K G LEEA ++FE+MP+R+ +++T ++ G+ + D
Sbjct: 87 LQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL 146
Query: 194 RALSDYMSF---KNVVSWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGF 248
+ + F N + + +I R C +L F +D NV V +A++ +
Sbjct: 147 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
+ G++++A+L+F+ ++ ++ VS+NA+IAG+A+ E+AL LF GM++ +P +
Sbjct: 207 TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYA 266
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
S+F ACS+ L +G+ H +I++G + N ++ MY++ G I D+ F ++
Sbjct: 267 SLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
++VSWN+++ A+AQHG ++A+ +F +M G P+ I+FLS+L+AC H+G ++E +
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
ELM K GI+P + HY +VD+L RAG L +A + + MP E +W +LL AC ++ N
Sbjct: 387 ELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
ELG AA+ + ELDP + +V+L N+YA+ G W D RVR MKE GV K+ A SW+E
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Query: 549 IGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
I N +H F+ D HP ++I + + ++K +
Sbjct: 506 IENAIHMFVANDERHPQREEIARKWEEVLAKIKEL 540
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 172/390 (44%), Gaps = 55/390 (14%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G+I A + + D++ N ++ Y + G L+E++ +F+ MP ++ V+W +I+G
Sbjct: 79 GRIVHA-HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP--------RRNVI 175
+DR DA +F M + +S +K E Q+ NV
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF------- 228
+A+LD + + G +D A+ + D + +N VSW +I G+ + +A ELF
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 229 -----------------------------YRMPDYDKNV-FVVTAMITGFCKVGMLENAR 258
Y + +K V F ++ + K G + +AR
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F+R+ +D VS+N+++ YAQ+G +EA+ F M ++ ++P++ + +SV TACS
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH----SPNLVSWN 374
LL+EG + L+ ++G V+ + R G D A R I P W
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG---DLNRALRFIEEMPIEPTAAIWK 434
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ A H + E L ++ + DPD
Sbjct: 435 ALLNACRMHKNTE--LGAYAAEHVFELDPD 462
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 37/277 (13%)
Query: 289 LRLFSGMIKMDMQPDDATLV-SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
LR S ++ P D ++ C+ +LL +GR H ++++ F ++ + N ++
Sbjct: 44 LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN 103
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY++CG + ++ F ++ + V+W T+I+ ++QH AL+FF+QM G+ P+ T
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 408 FLSLLSA-------------------CGHAGKVNESMDLFELMVKVYGIIPSSE------ 442
S++ A CG V+ L +L + YG++ ++
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR-YGLMDDAQLVFDAL 222
Query: 443 ------HYTCLVDILSRAGQLEKAWQITQGM---PFEADTGVWGSLLAACVINLNVELGE 493
+ L+ +R EKA ++ QGM F + SL AC +E G+
Sbjct: 223 ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK 282
Query: 494 -LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ A ++ + + L ++YA +G D ++
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
F N + +++G I AR++FD++ +DV++WN+++T Y Q+GF +E+ F+ M
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 109 ---VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT----YNAMISGFLKHGRLEE 161
N +S+ ++ C + +D+ + Y++ M + Y ++ + G L
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 162 ATRLFEQMP 170
A R E+MP
Sbjct: 417 ALRFIEEMP 425
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 114/272 (41%), Gaps = 34/272 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V +A + +R G + A+ +FD + +++ ++WNA+I G+ + +++ LFQ M
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM-- 253
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS-GFLKHGRLEEATRLFEQ 168
D F+ + + A S GFL+ G+ A + +
Sbjct: 254 ---------------------LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY-MIKS 291
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
+ + +LD + K G + AR + D ++ ++VVSW ++T Y ++ EA F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 229 YRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS----FNAMIAGYAQN 282
M N +++T G+L+ +E ++ V + ++ +
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
G ALR +M ++P A ++ AC
Sbjct: 412 GDLNRALRFIE---EMPIEPTAAIWKALLNAC 440
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 261/452 (57%), Gaps = 7/452 (1%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E + T N +I+ + K ++ A + F +MP ++++S+ ++ + E +A L
Sbjct: 75 EMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQ 134
Query: 200 MSFKNVVSWTVMITGYVKNERF------CEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
M + I+ + N F C F D N FV TA++ + K
Sbjct: 135 MQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSS 194
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+++A +FE + K+ V++++M+AGY QNG EEAL +F M D + S +A
Sbjct: 195 IKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSA 254
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVS 372
C+ L L EG+Q H + ++GF +N+ V +++I MY++CG I ++ L F+ + ++V
Sbjct: 255 CAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVL 314
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WN +I+ FA+H +A+I F +M GF PD +T++ +L+AC H G E F+LMV
Sbjct: 315 WNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMV 374
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
+ + + PS HY+C++DIL RAG + KA+ + + MPF A + +WGSLLA+C I N+E
Sbjct: 375 RQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFA 434
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNK 552
E+AAK + E++P N+ +++L+N+YAA W +V R R L++E V K+ SWIEI NK
Sbjct: 435 EIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKERGTSWIEIKNK 494
Query: 553 VHYFLGGDMSHPCIDKIHLELKRASVQMKSVD 584
+H F G+ +HP ID I+ +L V++K ++
Sbjct: 495 IHSFTVGERNHPQIDDIYAKLDNLVVELKKLN 526
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 185/388 (47%), Gaps = 29/388 (7%)
Query: 26 TPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWN 85
T S G H+ +IR+ + +N I+ S+ + +AR+ F++M K +++WN
Sbjct: 56 TRSSMGGRACHAQ--IIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWN 113
Query: 86 AIITGYWQNGFLQESKNL----------FQSMPVKNIV---SWNCMIAGCIDNDRIDDAF 132
+I QN +E+ L F + +++ ++ C I C+ AF
Sbjct: 114 TVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQ----LHAF 169
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
+A + N A++ + K +++A+++FE MP +N +++++M+ G+++ G ++
Sbjct: 170 S-IKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKN----ERFCEAREL--FYRMPDYDKNVFVVTAMIT 246
A + MI+ V E +++ + N++V +++I
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLID 288
Query: 247 GFCKVGMLENARLLFERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K G + A L+F+ + + + V +NAMI+G+A++ A EA+ LF M + PDD
Sbjct: 289 MYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDV 348
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDS-ELAFR 363
T V V ACS + L EG++ L++R + +V + +I + R G + + +L R
Sbjct: 349 TYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIER 408
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ W +++A+ +G+ E A I
Sbjct: 409 MPFNATSSMWGSLLASCKIYGNIEFAEI 436
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GR H +IR G E ++ N +I MYS+C + + F ++ +LVSWNT+I A Q
Sbjct: 62 GRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQ 121
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+ +AL QM G + T S+L C + E M L +K I +
Sbjct: 122 NAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKA-AIDSNCF 180
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
T L+ + ++ ++ A Q+ + MP E + W S++A V N
Sbjct: 181 VGTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMAGYVQN 223
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/501 (34%), Positives = 269/501 (53%), Gaps = 45/501 (8%)
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAML 181
DRI DA F MP+R+ ++AMI+G+ + G +EEA LF +M N++S+ ML
Sbjct: 153 DRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGML 212
Query: 182 DGFMKKGEVDKARALSDYMSFKNV-------------------VSWTVMITGYVKNERFC 222
GF G D+A + M + V + GYV +
Sbjct: 213 AGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLG 272
Query: 223 EARELFYRMPD-YDK-----------------NVFVVTAMITGFCKVGMLENARLLFERI 264
+ + M D Y K + + A +TG + GM++ A +F +
Sbjct: 273 SDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKF 332
Query: 265 QPK----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
+ + + V++ ++IA +QNG EAL LF M ++P+ T+ S+ AC + L
Sbjct: 333 KDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISAL 392
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
G++ H +R G +V V +A+I MY++CG I + F ++ + NLVSWN ++ +
Sbjct: 393 MHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGY 452
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A HG ++ + F M +G PD +TF +LSAC G E + M + +GI P
Sbjct: 453 AMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPK 512
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
EHY CLV +LSR G+LE+A+ I + MPFE D VWG+LL++C ++ N+ LGE+AA+K+
Sbjct: 513 MEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLF 572
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
L+P N Y++LSN+YA+ G+W + R+R +MK +G+ K YSWIE+G+KVH L GD
Sbjct: 573 FLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGD 632
Query: 561 MSHPCIDKIHLELKRASVQMK 581
SHP + I +L + ++QMK
Sbjct: 633 QSHPQMKDILEKLDKLNMQMK 653
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 204/461 (44%), Gaps = 95/461 (20%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKI-SALS----RAGKISAAR 70
L P + S SC + + F+ F+ ++ + S+L+ + +I AR
Sbjct: 100 LIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDAR 159
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNCMIAGCIDND 126
+LFD+M +DV+ W+A+I GY + G ++E+K LF M N+VSWN M+AG +N
Sbjct: 160 KLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNG 219
Query: 127 RIDDAFDYFQAM------PERNTAT---------------------------------YN 147
D+A F+ M P+ +T + +
Sbjct: 220 FYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVS 279
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK---- 203
AM+ + K G ++E +R+F+++ + S A L G + G VD AL + FK
Sbjct: 280 AMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDT--ALEVFNKFKDQKM 337
Query: 204 --NVVSWTVMITGYVKNERFCEARELFYRMPDYD-------------------------- 235
NVV+WT +I +N + EA ELF M Y
Sbjct: 338 ELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKE 397
Query: 236 -----------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+V+V +A+I + K G ++ AR F+++ + VS+NA++ GYA +G
Sbjct: 398 IHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGK 457
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCN 343
A+E + +F M++ +PD T V +AC+ L EG R + + +G E +
Sbjct: 458 AKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYA 517
Query: 344 AVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQH 383
++T+ SR G + ++ +++ P+ W ++++ H
Sbjct: 518 CLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVH 558
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
SF+++I +A++ L FS + + + PD L S +C++L+ L+ G+Q H
Sbjct: 71 SFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFA 130
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+GF + V +++ MY +C ILD+ F ++ ++V W+ +IA +++ G E+A
Sbjct: 131 AASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAK 190
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F +M G +P+ +++ +L+ G+ G +E++ +F +M+ V G P +C +
Sbjct: 191 ELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMML-VQGFWPDGSTVSC---V 246
Query: 451 LSRAGQLE 458
L G LE
Sbjct: 247 LPAVGCLE 254
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF---RQIHSPNLVSWNTI 376
L++ RQ+H L++R ++ + ++++ Y+ + +L+ + P L S++++
Sbjct: 16 LSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSL 75
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I AFA+ H+ L FS + PD S + +C ++ L G
Sbjct: 76 IHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAF-AAASG 134
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ S + L + + ++ A ++ MP + D VW +++A
Sbjct: 135 FLTDSIVASSLTHMYLKCDRILDARKLFDRMP-DRDVVVWSAMIAG 179
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 188/597 (31%), Positives = 295/597 (49%), Gaps = 72/597 (12%)
Query: 29 SCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAII 88
SC H L+RL + ++ N + G + + ++ DQ ++ +N +I
Sbjct: 21 SCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMI 80
Query: 89 TGYWQNGFLQESKNLFQSMPVKNI-----------------------VSWNCMI--AGCI 123
G N QES ++ SM + + V + ++ AGC
Sbjct: 81 RGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCE 140
Query: 124 DN--------------DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEAT----RL 165
+ ID+AF F +P++N A++ A ISG++ G+ EA RL
Sbjct: 141 ADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRL 200
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
E R + S +L + G++ + +Y++ +V
Sbjct: 201 LEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMV------------------- 241
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+NVFV TA++ + K G +E AR +F+ + K+ VS+++MI GYA NG+
Sbjct: 242 ----------RNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLP 291
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+EAL LF M+ ++PD +V V +C+ L L G + L+ N F N + A+
Sbjct: 292 KEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTAL 351
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I MY++CG + + FR + + V WN I+ A GH + AL F QM +G PD
Sbjct: 352 IDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDR 411
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
TF+ LL AC HAG V E F M V+ + P EHY C+VD+L RAG L++A Q+ +
Sbjct: 412 NTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIK 471
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
MP EA+ VWG+LL C ++ + +L E+ KK+ L+P +S YV+LSN+YAA+ W +
Sbjct: 472 SMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEE 531
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
++R +M E+GV K YSWIE+ VH FL GD SHP +KI+ +L + +K+
Sbjct: 532 AAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKA 588
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 257/424 (60%), Gaps = 6/424 (1%)
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALSDYMSFKNVVSWTVMITGYVKNE 219
++FE MP+R+++S+ ++ G + G + A R + + + + + ++ + +
Sbjct: 191 KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYV 250
Query: 220 RFCEARELF-YRMPD-YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ +E+ Y + + YD +VF+ +++I + K ++++ +F + D +S+N++IA
Sbjct: 251 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 310
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
G QNG+ +E L+ F M+ ++P+ + S+ AC+ L L+ G+Q H +IR+ F+
Sbjct: 311 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 370
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
NV + +A++ MY++CG I + F ++ ++VSW +I +A HGH A+ F +M
Sbjct: 371 NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME 430
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
+ G P+ + F+++L+AC HAG V+E+ F M + Y IIP EHY + D+L R G+L
Sbjct: 431 VEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRL 490
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
E+A++ M E VW +LLAAC ++ N+EL E +KK+ +DPQN YV+LSN+Y
Sbjct: 491 EEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIY 550
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
+AAG W+D ++R+ M+++G+ K+ A SWIEI NKVH F+ GD SHP D+I+ LK
Sbjct: 551 SAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLL 610
Query: 578 VQMK 581
QM+
Sbjct: 611 EQME 614
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 125/233 (53%), Gaps = 14/233 (6%)
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L + R +FE + +D VS+N +I+G AQNG+ E+AL + M D++PD TL SV
Sbjct: 186 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 245
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
+ L +G++ H IRNG++A+V + +++I MY++C + DS F + + +SW
Sbjct: 246 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 305
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N+IIA Q+G +++ L FF QM + P+ ++F S++ AC H + L +
Sbjct: 306 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAH-------LTTLHLGKQ 358
Query: 434 VYGIIPSSEH------YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
++G I S + LVD+ ++ G + A I M D W +++
Sbjct: 359 LHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMEL-YDMVSWTAMI 410
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 226/515 (43%), Gaps = 119/515 (23%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSR---AGKISAARQL 72
+FP +L+ + F C+IRL ++ NA ++ S+ +++ +++
Sbjct: 108 VFPSVLKSCTLMKDL-RFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKV 166
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF 132
FD+ T DV + ++ +L + +F+ MP ++IVSWN +I+G N +DA
Sbjct: 167 FDEGKTSDVYSKKEK-----ESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDAL 221
Query: 133 DYFQAM------PERNT--------ATYNAMISGFLKHG--------------------- 157
+ M P+ T A Y ++ G HG
Sbjct: 222 MMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMY 281
Query: 158 ----RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK----------ARALSDYMSFK 203
R++++ R+F +P+ + IS+ +++ G ++ G D+ A+ +++SF
Sbjct: 282 AKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFS 341
Query: 204 NVVSWTVMIT---------GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
+++ +T GY+ RF D NVF+ +A++ + K G +
Sbjct: 342 SIMPACAHLTTLHLGKQLHGYIIRSRF-------------DGNVFIASALVDMYAKCGNI 388
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
AR +F++++ D VS+ AMI GYA +G A +A+ LF M ++P+ ++V TAC
Sbjct: 389 RTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTAC 448
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
S L++E + + ++ +R I P L +
Sbjct: 449 SHAGLVDEAWKYFNSMTQD----------------------------YRII--PGLEHYA 478
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE-LMVK 433
+ + G E+A F S M + +P G + +LL+AC +V+++++L E + K
Sbjct: 479 AVADLLGRVGRLEEAYEFISDMHI---EPTGSVWSTLLAAC----RVHKNIELAEKVSKK 531
Query: 434 VYGIIPSS-EHYTCLVDILSRAGQLEKAWQITQGM 467
++ + P + Y L +I S AG+ + A ++ M
Sbjct: 532 LFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAM 566
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 123/277 (44%), Gaps = 32/277 (11%)
Query: 240 VVTAMITGFCKVGMLENARLLFERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
+++ +++ + + +L ++ L+F + P +++ ++I Y +G+ +L F M+
Sbjct: 41 LLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLAS 100
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
PD SV +C+ ++ L G H +IR G ++ CNA++ MYS+ + +
Sbjct: 101 GKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEV 160
Query: 359 EL-----------------------------AFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
F + ++VSWNT+I+ AQ+G +E A
Sbjct: 161 NTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDA 220
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L+ +MG PD T S+L + + ++ ++ G + L+D
Sbjct: 221 LMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIR-NGYDADVFIGSSLID 279
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ ++ +++ + ++ +P + D W S++A CV N
Sbjct: 280 MYAKCTRVDDSCRVFYMLP-QHDGISWNSIIAGCVQN 315
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+ +A + ++ G I AR +FD+M D+++W A+I GY +G ++ +LF+ M V
Sbjct: 372 VFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEV 431
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
+ N V++ ++ C +D+A+ YF +M + Y A+ + GRLE
Sbjct: 432 EGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLE 491
Query: 161 EATRLFEQM---PRRNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVSWTVMITG 214
EA M P +V ++ +L ++ A +S + +N+ ++ ++
Sbjct: 492 EAYEFISDMHIEPTGSV--WSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNI 549
Query: 215 YVKNERFCEARELFYRMPD 233
Y R+ +AR+L M D
Sbjct: 550 YSAAGRWKDARKLRIAMRD 568
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLVSW 373
S+++ ++ +Q H ++R + S+ + ++++YS + DS L F + SP ++W
Sbjct: 16 SSVKSKSQAKQLHAQILRTSLPSP-SLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAW 74
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+II + HG + +L FF QM +G PD F S+L +C
Sbjct: 75 KSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSC 116
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 312/566 (55%), Gaps = 23/566 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV NA + S+ G I A+ LF + KD I+WNA+ G QN +E+ + + M +
Sbjct: 471 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRL 530
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
I VS++ I C N R + + + N A +++I + KHG +E
Sbjct: 531 HGITPDDVSFSTAINAC-SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE 589
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMSFKNVVSWTVMITGY 215
+ ++F Q+ +++ A++ GF++ D+A + L D + + V+++ +++G
Sbjct: 590 SSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLK-PSSVTFSSILSGC 648
Query: 216 VKNERFCEARELF-YRMPD---YDKNVFVVTAMITGFCKVGMLENA-RLLFERIQPKDCV 270
+ +++ Y + YD + V+ + + K MLE+A +LL E K+
Sbjct: 649 SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVS-LAGIYLKSKMLEDANKLLTEMPDHKNLF 707
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+ A+I+GYAQNG + +L F M +++ D+AT SV ACS + +G++ H L+
Sbjct: 708 EWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLI 767
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKA 389
++GF + + +A+I MYS+CG ++ S AF+++ + +++ WN++I FA++G+ ++A
Sbjct: 768 TKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEA 827
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L+ F +M PD +TFL +L AC H+G ++E F M KVYG+ P +HY C +D
Sbjct: 828 LLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFID 887
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L R G L++A + +PF D VW + LAAC ++ + E G++AA+K+ EL+PQ S+
Sbjct: 888 LLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSST 947
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
YV+LS+L+AA G W + R M+E+GV K SWI +GNK FL D HP +I
Sbjct: 948 YVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRI 1007
Query: 570 HLELKRASVQMKSVDDFVEIATSWSS 595
+ L + MK +D E +S+
Sbjct: 1008 YEMLGDLTGMMKKDNDIDEYGLLYSA 1033
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 208/425 (48%), Gaps = 44/425 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF A + ++ G + AR++FD + D I W+++I Y + G QE+ LF M
Sbjct: 203 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM-- 260
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
D++ A D T +IS GRL+ AT L ++M
Sbjct: 261 ----------------DKMGSAPD---------QVTLVTIISTLASSGRLDHATALLKKM 295
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV---------MITGYVKNER 220
P + +++ A++ G + G L +K++ SW + M++ +
Sbjct: 296 PTPSTVAWNAVISGHAQSGLEFNVLGL-----YKDMRSWGLWPTRSTFASMLSAAANMKA 350
Query: 221 FCEARELFYR--MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
F E +++ M D NVFV +++I + K G +A+ +F+ K+ V +NAM+ G
Sbjct: 351 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 410
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
+ QN + EEA+R+F M++ +Q D+ T VS+ AC+ L G+Q H + I+N + +
Sbjct: 411 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDIS 470
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+ V NA + MYS+ G I D++ F I + +SWN + AQ+ E+A+ +M L
Sbjct: 471 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRL 530
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+G PD ++F + ++AC + + L +K YGI + + L+D+ S+ G +E
Sbjct: 531 HGITPDDVSFSTAINACSNIRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVE 589
Query: 459 KAWQI 463
+ +I
Sbjct: 590 SSRKI 594
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 18/305 (5%)
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQ 301
+++ +CK G + A + + +++++ +A++G + L F + +
Sbjct: 106 SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGR 165
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD L V +ACS + +L GRQ H V+++GF ++V A++ MY++CG + ++
Sbjct: 166 PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRV 225
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F I P+ + W+++IA + + G Y++AL FS+M G PD +T ++++S +G++
Sbjct: 226 FDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRL 285
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS--- 478
+ + L + M PS+ + ++ +++G + + M G+W +
Sbjct: 286 DHATALLKKMP-----TPSTVAWNAVISGHAQSGLEFNVLGLYKDM---RSWGLWPTRST 337
Query: 479 ----LLAACVINLNVELGEL-AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
L AA + VE ++ AA M LD N V L NLYA G D V L
Sbjct: 338 FASMLSAAANMKAFVEGQQMHAAAVMHGLD-ANVFVGSSLINLYAKCGCPSDAKNVFDLS 396
Query: 534 KEQGV 538
E+ +
Sbjct: 397 CEKNI 401
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 271/472 (57%), Gaps = 37/472 (7%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +++ + K G+ + + LF MPRRNV+S+ +++G+++ G+++ A+ L D MS +N+
Sbjct: 101 NHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIA 160
Query: 207 SWTVMITGYVKNERFCEARELFYRM------PD--------------------------- 233
+W MI G + E +A LF M PD
Sbjct: 161 TWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACL 220
Query: 234 ----YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
++ + V +++ + K G L + L + + + V++N +IAG AQNG EE L
Sbjct: 221 LKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVL 280
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
++ M +PD T VSV +ACS L L +G+Q H VI+ G + ++V +++I+MY
Sbjct: 281 NQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMY 340
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
SR G + DS AF + ++V W+++IAA+ HG E+AL F QM + + +TFL
Sbjct: 341 SRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFL 400
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
SLL AC H+G + + F+LMVK Y + P EHYTC+VD+L RAG+LE+A + + MP
Sbjct: 401 SLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPV 460
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ D +W +LLAAC ++ E+ E ++++ +LDP ++A YV+LSN++A+A W +V+++
Sbjct: 461 QPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQI 520
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
R M+++ V K+ SW+E+ N VH F GD SHP +I L LK ++K
Sbjct: 521 RKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELK 572
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 179/386 (46%), Gaps = 47/386 (12%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F++N ++ S+ G+ ++ LF M ++V+++N +I GY Q G L+ ++ LF M +
Sbjct: 98 FISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSER 157
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAM------PE--------RNTATYNAMISG---- 152
NI +WN MIAG + A F+ M P+ R A ++++G
Sbjct: 158 NIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVH 217
Query: 153 ---------------------FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG--- 188
++K G L + +L + MP R V+++ ++ G + G
Sbjct: 218 ACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPE 277
Query: 189 EVDKARALSDYMSFK-NVVSWTVMITGYVKNERFCEARELFYRMPDYDKN--VFVVTAMI 245
EV + F+ + +++ +++ + + +++ + + + VV+++I
Sbjct: 278 EVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLI 337
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ + + G LE++ F + D V +++MIA Y +G EEAL LF M + M+ ++
Sbjct: 338 SMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEV 397
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
T +S+ ACS L +G + L+++ + + V+ + R G + ++E R
Sbjct: 398 TFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRS 457
Query: 365 IH-SPNLVSWNTIIAAFAQHGHYEKA 389
+ P+ + W T++AA H E A
Sbjct: 458 MPVQPDGIIWKTLLAACKLHKEAEMA 483
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 85/215 (39%), Gaps = 33/215 (15%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG--------- 353
D + + +C L L G+Q H L+I +G + + N ++ YS+ G
Sbjct: 61 DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120
Query: 354 ---------------------GILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
G L+S + F ++ N+ +WN +IA Q ++AL
Sbjct: 121 SNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALS 180
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F +M GF PD T S+L C + ++ ++K G SS + L +
Sbjct: 181 LFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKC-GFELSSVVGSSLAHMY 239
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
++G L ++ + MP W +L+A N
Sbjct: 240 IKSGSLSDGEKLIKSMPIRTVVA-WNTLIAGKAQN 273
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+ ++ + V ++ IS SR+G + + + F DV+ W+++I Y +G +E+
Sbjct: 321 VIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEA 380
Query: 101 KNLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
LF M N V++ ++ C + + +YF M ++ Y ++
Sbjct: 381 LELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVD 440
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ GRLEEA + MP
Sbjct: 441 LLGRAGRLEEAEGMIRSMP 459
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 300/558 (53%), Gaps = 17/558 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A + + + AR++FD M +D + WN +I+G+ +N + ++S +F M
Sbjct: 148 LFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLD 207
Query: 110 KNIVSWNCMIAGC------IDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEE 161
+ + +A + R+ + ++ Y +IS + K G+ +
Sbjct: 208 VGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCK 267
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM--SFKNVVSWTV--MITGYVK 217
LF+Q+ + ++ISY AM+ G+ E + A L + S + V S T+ +I Y+
Sbjct: 268 GRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLP 327
Query: 218 NERFCEARELFYRMPDYDKNVF---VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+R L + + V TA+ T +C++ ++ AR LF+ K S+NA
Sbjct: 328 FNHLQLSR-LIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNA 386
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI+GY QNG+ + A+ LF M+ + P+ T+ S+ +AC+ L L+ G+ H L+
Sbjct: 387 MISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
E+NV V A++ MY++CG I+++ F + N+V+WN +I + HGH ++AL F
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFY 505
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M +G P G+TFLS+L AC H+G V+E ++F M YG P SEHY C+VDIL RA
Sbjct: 506 EMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRA 565
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
GQL A + + MP E VWG+LL AC+I+ N E+ +A+K++ +LDP+N YV+LS
Sbjct: 566 GQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLS 625
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+Y+ + VR ++K++ + K + IEI ++ + F GD SHP I L+
Sbjct: 626 NIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLE 685
Query: 575 RASVQMKSVDDFVEIATS 592
+ + +M+ E T+
Sbjct: 686 KLTGKMREAGYQAETVTT 703
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 172/374 (45%), Gaps = 12/374 (3%)
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN-------V 205
F G + +LF ++ + ++ + ++ GF G + L ++ K
Sbjct: 56 FFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFT 115
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
++ + +++ER + N+FV +A++ + K E AR +F+ +
Sbjct: 116 YAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP 175
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+D V +N MI+G+++N E+++R+F M+ + + D TL +V TA + LQ G
Sbjct: 176 ERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMG 235
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
L + G ++V V +I++YS+CG + F QI P+L+S+N +I+ + +
Sbjct: 236 IQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHE 295
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E A+ F ++ +G + T + L+ + S + L +K+ GII T
Sbjct: 296 TESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKI-GIILQPSVST 354
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
L + R +++ A Q+ P E W ++++ N L + A +E+ PQ
Sbjct: 355 ALTTVYCRLNEVQFARQLFDESP-EKSLASWNAMISGYTQN---GLTDRAISLFQEMMPQ 410
Query: 506 NSAVYVMLSNLYAA 519
S V ++++ +A
Sbjct: 411 LSPNPVTVTSILSA 424
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMD 299
+T + F +G + + R LF ++ D FN +I G++ NG+ + ++ L++ + K +
Sbjct: 49 ITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTN 108
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++PD+ T +A S L+ G H I +G +N+ V +A++ +Y + +
Sbjct: 109 LRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAR 168
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + + V WNT+I+ F+++ ++E ++ F M G D T ++L+A
Sbjct: 169 KVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQ 228
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
+ M + + + G+ T L+ + S+ G+
Sbjct: 229 EYRLGMGI-QCLASKKGLHSDVYVLTGLISLYSKCGK 264
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/535 (31%), Positives = 277/535 (51%), Gaps = 45/535 (8%)
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-- 138
V +A++ Y +NG + E + +F MP++N+VSW +I G + +A YF M
Sbjct: 151 VFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWR 210
Query: 139 --PERNTATYNAMISGFLKHGRLEEATRLFEQMPRR--NVISYTA--MLDGFMKKGEVDK 192
E ++ T+ + G L + Q ++ +V S+ A + + K G+++
Sbjct: 211 SRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEY 270
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITG--- 247
L + MS ++VVSWT +IT V+ + A + F RM + D N + A+I+G
Sbjct: 271 GLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCAN 330
Query: 248 --------------------------------FCKVGMLENARLLFERIQPKDCVSFNAM 275
+ K G L ++ ++F + +D VS++ +
Sbjct: 331 LARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTI 390
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAGY+Q G EA L S M +P + L SV +AC + +L G+Q H V+ G
Sbjct: 391 IAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGL 450
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E V +A+I MY +CG I ++ F + ++VSW +I +A+HG+ + + F +
Sbjct: 451 EHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEK 510
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
+ G PD +TF+ +LSAC HAG V+ F M K Y I PS EHY C++D+L RAG
Sbjct: 511 IPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAG 570
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L A + + MPF D VW +LL AC ++ +VE G A+++ +L+P + ++ L+N
Sbjct: 571 RLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLAN 630
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
+YA+ G WR+ +R LMK +GV K+ +SWI++ + V F+ GD SHP + I+
Sbjct: 631 IYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIY 685
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 222/429 (51%), Gaps = 22/429 (5%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N ++ L + G + AR++FD+M+ KD I+W +I+GY E+ LF++M V++
Sbjct: 52 SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111
Query: 113 VSWNCMIAGCIDND-RIDDAFDYFQAMPERNTAT--------YNAMISGFLKHGRLEEAT 163
+ + I ++ +Y + + T +A++ + K+G++ E
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKA--------RALSDYMSFKNVVSWTVMI-TG 214
R+F +MP RNV+S+TA++ G ++ G +A R+ +Y S+ ++ +G
Sbjct: 172 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+ R A+ + +D + FV + T + K G LE LFE++ +D VS+
Sbjct: 232 ALNYGREIHAQAM---KKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTT 288
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+I Q G E A++ F M + D+ P++ T +V + C+ L + G Q H L++ G
Sbjct: 289 IITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLG 348
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
A++SV N+++TMY++CG + S + F ++ ++VSW+TIIA ++Q GH +A S
Sbjct: 349 LAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLS 408
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
M + G P S+LSACG+ + L ++ + G+ ++ + L+++ +
Sbjct: 409 WMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSI-GLEHTAMVLSALINMYCKC 467
Query: 455 GQLEKAWQI 463
G +E+A +I
Sbjct: 468 GSIEEASRI 476
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 172/377 (45%), Gaps = 23/377 (6%)
Query: 122 CID-------NDRIDDAFDYFQA--MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
CID ND + + +PE N + +K G L A R+F++M ++
Sbjct: 24 CIDLQVLERSNDNLSQNIHFISQTDLPESNK-----QLKELVKTGHLGNARRMFDKMSQK 78
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKN-------VVSWTVMITGYVKNERFCEAR 225
+ IS+T ++ G++ + +A L M ++ ++S G + + E
Sbjct: 79 DEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELL 138
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ +VFV +A++ + K G + R +F + ++ VS+ A+I G + G
Sbjct: 139 HGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYN 198
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+EAL FS M + ++ D T AC+ LN GR+ H ++ GF+ + V N +
Sbjct: 199 KEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTL 258
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
TMY++CG + F ++ ++VSW TII Q G E A+ F +M + P+
Sbjct: 259 ATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNE 318
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
TF +++S C + ++ L L++ + G+ S ++ + ++ GQL + I
Sbjct: 319 YTFAAVISGCANLARIEWGEQLHALILHL-GLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 466 GMPFEADTGVWGSLLAA 482
M D W +++A
Sbjct: 378 EMT-RRDIVSWSTIIAG 393
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/434 (37%), Positives = 254/434 (58%), Gaps = 35/434 (8%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+ ++N++I G ++ G E+A F++M R+ MK E L+ + S
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKMRSRD-----------MKIDEYTLPSVLNSFAS 53
Query: 202 FK---NVVSWTVMI--TGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
K N +S +I TG+ EA +L V A+I + K G L+
Sbjct: 54 MKVMQNAISVHCLIIKTGF-------EAYKL------------VNNALIDMYAKQGKLDC 94
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A ++F ++ KD VS+ +++ GY+ NG EEA++LF M + PD + SV +AC+
Sbjct: 95 AIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAE 154
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L +++ G+Q H ++++G E+++SV N+++TMY++CG I+D+ AF + + +++SW +
Sbjct: 155 LTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTAL 214
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I +AQ+G + +L F+ QM G PD ITF+ LL AC H G + FE M KVYG
Sbjct: 215 IVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYG 274
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
I P EHY C++D+L R+G+L +A + M D VW +LLAAC ++ +ELGE+AA
Sbjct: 275 IKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAA 334
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
K + EL+P NS YVMLSN+Y+AAG W D R+R LM+ +G+ K+ YSWIE +KV F
Sbjct: 335 KNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTF 394
Query: 557 LGGDMSHPCIDKIH 570
+ D +HP ++I+
Sbjct: 395 MSEDRNHPLRNEIY 408
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 189/434 (43%), Gaps = 105/434 (24%)
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF 135
M D ++WN++I G + GF +++ + FQ M +++ ID + + F
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMK---------IDEYTLPSVLNSF 51
Query: 136 QAMP-ERNTATYNAMI--SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
+M +N + + +I +GF EA +L A++D + K+G++D
Sbjct: 52 ASMKVMQNAISVHCLIIKTGF-------EAYKLVNN----------ALIDMYAKQGKLDC 94
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------- 233
A + M K+VVSWT ++TGY N + EA +LF +M PD
Sbjct: 95 AIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAE 154
Query: 234 ------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ ++ V +++T + K G + +A F+ + +D +S+ A+
Sbjct: 155 LTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTAL 214
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I GYAQNG + +L+ + MI +PD T + + ACS LL GR F
Sbjct: 215 IVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAY--------F 266
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
EA +D + P + +I + G +A +Q
Sbjct: 267 EA------------------MDKVYGIK----PGPEHYACMIDLLGRSGKLAEAKGLLNQ 304
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-VYGIIP-SSEHYTCLVDILSR 453
M + PD + + +LL+AC +V++ ++L E+ K ++ + P +S Y L ++ S
Sbjct: 305 MVVA---PDAVVWKALLAAC----RVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSA 357
Query: 454 AGQLEKAWQITQGM 467
AG+ E A +I + M
Sbjct: 358 AGKWEDAARIRRLM 371
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 132/315 (41%), Gaps = 52/315 (16%)
Query: 37 SSNCLI-RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
S +CLI + Y VNNA I ++ GK+ A +F +M KDV++W +++TGY NG
Sbjct: 62 SVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNG 121
Query: 96 FLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYN 147
+E+ LF M + + +A + D+ Q + E + + N
Sbjct: 122 SYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDN 181
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
++++ + K G + +A R F+ MP R+VIS+TA++ G+ + G + D M
Sbjct: 182 SLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQM------- 234
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER---- 263
+ TG PDY ++ G+L + R FE
Sbjct: 235 ---IATG---------------TKPDY----ITFIGLLFACSHNGLLGSGRAYFEAMDKV 272
Query: 264 --IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
I+P + MI ++G EA L + M+ + PD ++ AC + L
Sbjct: 273 YGIKPGP-EHYACMIDLLGRSGKLAEAKGLLNQMV---VAPDAVVWKALLAACRVHKELE 328
Query: 322 EGRQSHVLVIRNGFE 336
G + +N FE
Sbjct: 329 LGE----MAAKNLFE 339
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 187/562 (33%), Positives = 301/562 (53%), Gaps = 42/562 (7%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQES 100
+++ S + +F + +++ R + LF++ K DV +WN++I ++G E+
Sbjct: 1 MKVPSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEA 60
Query: 101 KNLFQSM------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY-------N 147
F SM P ++ S+ C I C + D F Q + Y +
Sbjct: 61 LRAFSSMRKLSLYPTRS--SFPCAIKAC---SSLLDIFSGKQTHQQAFVFGYQSDIFVSS 115
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV----------------D 191
A+I + G+LE+A ++F+++P+RN++S+T+M+ G+ G D
Sbjct: 116 ALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDD 175
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
A D M +V+S V + E+ F +D+ V V ++ + K
Sbjct: 176 DATMFLDSMGMVSVIS----ACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKG 231
Query: 252 GM--LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA-TLV 308
G + AR +F++I KD VS+N++++ YAQ+G++ EA +F +IK + + TL
Sbjct: 232 GEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLS 291
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
+V A S L G+ H VIR G E +V V ++I MY +CG + + LAF ++ +
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNK 351
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
N+ SW +IA + HGH KAL F M +G P+ ITF+S+L+AC HAG + F
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWF 411
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
M +G+ P EHY C+VD+L RAG L+KA+ + Q M E D+ +W SLLAAC I+ N
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKN 471
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
VEL E++ ++ ELDP N Y++LS++YA +G W+DV RVR+ MK +G+ K +S +E
Sbjct: 472 VELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLE 531
Query: 549 IGNKVHYFLGGDMSHPCIDKIH 570
+ +VH FL GD HP +KI+
Sbjct: 532 LNGEVHVFLIGDEEHPQREKIY 553
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR+ V V + I + G++ AR FD+M K+V +W A+I GY +G ++
Sbjct: 313 VIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKA 372
Query: 101 KNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
LF +M N +++ ++A C D + +F AM R Y M+
Sbjct: 373 LELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVD 432
Query: 152 GFLKHGRLEEATRLFEQM 169
+ G L++A L ++M
Sbjct: 433 LLGRAGFLQKAYDLIQKM 450
>gi|302780000|ref|XP_002971775.1| hypothetical protein SELMODRAFT_60139 [Selaginella moellendorffii]
gi|300160907|gb|EFJ27524.1| hypothetical protein SELMODRAFT_60139 [Selaginella moellendorffii]
Length = 516
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 283/517 (54%), Gaps = 37/517 (7%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N I+A + + ++ LFD+M +D ITWN++++ Y Q G L+E+ +LF MP ++ +
Sbjct: 3 NIIITACIQNNAVGESKGLFDRMPERDTITWNSLLSAYAQRGHLEEANDLFYMMPERDYM 62
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWN +I ++ +D A + + MPE + +++ M++ + G L++ LF+ MP RN
Sbjct: 63 SWNTLIQASASSN-LDLAQEIYHYMPEHSHVSWSVMLTAYANFGHLDKTRSLFDSMPERN 121
Query: 174 VISYTAMLDGFMKKGEVDKARA-LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+IS+TAM G+ + G + ++ + + M ++V SWT MIT Y + + +AR F MP
Sbjct: 122 LISWTAMAAGYAQNGYLQESYSEIFSTMPERDVFSWTAMITVYGEFDDPHKARRCFDLMP 181
Query: 233 DYDKNVFVVTAMI-TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
KNV +AM + G LE+A++ FER+ +D VS+N++IA ++Q G EEA L
Sbjct: 182 H--KNVVSWSAMFQAAYAHNGHLESAKIAFERMPSRDVVSWNSIIAFFSQKGKLEEAKDL 239
Query: 292 F--------------------SGMIKMDMQ-----------PDDATLVSVFTACSALQLL 320
F SG + + M PD T +++F ACS +
Sbjct: 240 FHLMPEPNTAAWNVMIQAHAQSGHLDLAMDVFRLMDLHGVSPDSVTYIAIFDACSRIANA 299
Query: 321 NEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
EG ++ G + +V+V NA +TMY R G + F+Q+ + VSWN ++ A
Sbjct: 300 EEGSAFIASIVHPGILQDSVAVGNAALTMYGRSGLAAGAWSVFQQMPVRDSVSWNAMLTA 359
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
FA++GH E AL F M L G PD ITF+++LSAC HAG ++ + F + YG+ P
Sbjct: 360 FARNGHGEAALDVFLAMELEGLVPDIITFVNVLSACSHAGLLHRARGYFHSISCDYGLTP 419
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HY CL D+L+R+G+L +A ++ MPFE + W +LL AC + +V G AA
Sbjct: 420 IYDHYVCLTDLLARSGRLVEAEELVNSMPFEPNYEAWMALLGACRSHGDVRRGNRAAGFF 479
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
+ + YV+LS+LYA AG DV +R M+ +
Sbjct: 480 VQAGVDAESPYVLLSHLYAEAGSKDDVLVIRKAMRRK 516
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 172/374 (45%), Gaps = 41/374 (10%)
Query: 43 RLFST---QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAII-TGYWQNGFLQ 98
+FST + VF A I+ AR+ FD M K+V++W+A+ Y NG L+
Sbjct: 144 EIFSTMPERDVFSWTAMITVYGEFDDPHKARRCFDLMPHKNVVSWSAMFQAAYAHNGHLE 203
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
+K F+ MP +++VSWN +IA ++++A D F MPE NTA +N MI + G
Sbjct: 204 SAKIAFERMPSRDVVSWNSIIAFFSQKGKLEEAKDLFHLMPEPNTAAWNVMIQAHAQSGH 263
Query: 159 LEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
L+ A +F M V ++Y A+ D + ++ A +++ G
Sbjct: 264 LDLAMDVFRLMDLHGVSPDSVTYIAIFDACSRIANAEEGSAFIA----------SIVHPG 313
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+++ +V V A +T + + G+ A +F+++ +D VS+NA
Sbjct: 314 ILQD------------------SVAVGNAALTMYGRSGLAAGAWSVFQQMPVRDSVSWNA 355
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRN 333
M+ +A+NG E AL +F M + PD T V+V +ACS LL+ R H +
Sbjct: 356 MLTAFARNGHGEAALDVFLAMELEGLVPDIITFVNVLSACSHAGLLHRARGYFHSISCDY 415
Query: 334 GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE---KA 389
G + + +R G ++++ EL PN +W ++ A HG +A
Sbjct: 416 GLTPIYDHYVCLTDLLARSGRLVEAEELVNSMPFEPNYEAWMALLGACRSHGDVRRGNRA 475
Query: 390 LIFFSQMGLNGFDP 403
FF Q G++ P
Sbjct: 476 AGFFVQAGVDAESP 489
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 289/527 (54%), Gaps = 15/527 (2%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF-----QSMP-VKNIVSWNCMI 119
I+ AR+ F+ T+D N++I ++ + LF Q+ P + ++ ++
Sbjct: 73 INHARRFFNATHTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALV 132
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYN-----AMISGFLKHGRLEEATRLFEQMPRRNV 174
GC + M +N ++ A++ ++K G L A ++F++M R+
Sbjct: 133 KGCATRVATGEG-TLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSK 191
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
+S+TA++ G+ + G++ +AR L D M +++V++ MI GYVK ARELF M
Sbjct: 192 VSWTAVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEM--R 249
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
++NV T+M++G+C G +ENA+L+F+ + K+ ++NAMI GY QN + +AL LF
Sbjct: 250 ERNVVSWTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFRE 309
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M ++P++ T+V V A + L L+ GR H +R + + + A+I MY++CG
Sbjct: 310 MQTASVEPNEVTVVCVLPAVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGE 369
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I ++LAF + SWN +I FA +G ++AL F++M GF P+ +T + +LSA
Sbjct: 370 ITKAKLAFEGMTERETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSA 429
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V E F M + +GI P EHY C+VD+L RAG L++A + Q MP++A+
Sbjct: 430 CNHCGLVEEGRRWFNAMER-FGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGI 488
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+ S L AC +V E K++ ++D + YVML NLYA W DV V+ +MK
Sbjct: 489 ILSSFLFACGYFNDVLRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMK 548
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
++G +K+ A S IEIG F GD H ++ I L L + S MK
Sbjct: 549 KRGTSKEVACSVIEIGGSFIEFAAGDYLHSHLEVIQLTLGQLSKHMK 595
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 312/566 (55%), Gaps = 23/566 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV NA + S+ G I A+ LF + KD I+WNA+ G QN +E+ + + M +
Sbjct: 461 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRL 520
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
I VS++ I C N R + + + N A +++I + KHG +E
Sbjct: 521 HGITPDDVSFSTAINAC-SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE 579
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMSFKNVVSWTVMITGY 215
+ ++F Q+ +++ A++ GF++ D+A + L D + + V+++ +++G
Sbjct: 580 SSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLK-PSSVTFSSILSGC 638
Query: 216 VKNERFCEARELF-YRMPD---YDKNVFVVTAMITGFCKVGMLENA-RLLFERIQPKDCV 270
+ +++ Y + YD + V+ + + K MLE+A +LL E K+
Sbjct: 639 SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVS-LAGIYLKSKMLEDANKLLTEMPDHKNLF 697
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+ A+I+GYAQNG + +L F M +++ D+AT SV ACS + +G++ H L+
Sbjct: 698 EWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLI 757
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKA 389
++GF + + +A+I MYS+CG ++ S AF+++ + +++ WN++I FA++G+ ++A
Sbjct: 758 TKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEA 817
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L+ F +M PD +TFL +L AC H+G ++E F M KVYG+ P +HY C +D
Sbjct: 818 LLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFID 877
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L R G L++A + +PF D VW + LAAC ++ + E G++AA+K+ EL+PQ S+
Sbjct: 878 LLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSST 937
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
YV+LS+L+AA G W + R M+E+GV K SWI +GNK FL D HP +I
Sbjct: 938 YVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRI 997
Query: 570 HLELKRASVQMKSVDDFVEIATSWSS 595
+ L + MK +D E +S+
Sbjct: 998 YEMLGDLTGMMKKDNDIDEYGLLYSA 1023
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 208/425 (48%), Gaps = 44/425 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF A + ++ G + AR++FD + D I W+++I Y + G QE+ LF M
Sbjct: 193 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM-- 250
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
D++ A D T +IS GRL+ AT L ++M
Sbjct: 251 ----------------DKMGSAPD---------QVTLVTIISTLASSGRLDHATALLKKM 285
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV---------MITGYVKNER 220
P + +++ A++ G + G L +K++ SW + M++ +
Sbjct: 286 PTPSTVAWNAVISGHAQSGLEFNVLGL-----YKDMRSWGLWPTRSTFASMLSAAANMKA 340
Query: 221 FCEARELFYR--MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
F E +++ M D NVFV +++I + K G +A+ +F+ K+ V +NAM+ G
Sbjct: 341 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 400
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
+ QN + EEA+R+F M++ +Q D+ T VS+ AC+ L G+Q H + I+N + +
Sbjct: 401 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDIS 460
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+ V NA + MYS+ G I D++ F I + +SWN + AQ+ E+A+ +M L
Sbjct: 461 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRL 520
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+G PD ++F + ++AC + + L +K YGI + + L+D+ S+ G +E
Sbjct: 521 HGITPDDVSFSTAINACSNIRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVE 579
Query: 459 KAWQI 463
+ +I
Sbjct: 580 SSRKI 584
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 18/305 (5%)
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQ 301
+++ +CK G + A + + +++++ +A++G + L F + +
Sbjct: 96 SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGR 155
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD L V +ACS + +L GRQ H V+++GF ++V A++ MY++CG + ++
Sbjct: 156 PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRV 215
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F I P+ + W+++IA + + G Y++AL FS+M G PD +T ++++S +G++
Sbjct: 216 FDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRL 275
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS--- 478
+ + L + M PS+ + ++ +++G + + M G+W +
Sbjct: 276 DHATALLKKMP-----TPSTVAWNAVISGHAQSGLEFNVLGLYKDM---RSWGLWPTRST 327
Query: 479 ----LLAACVINLNVELGEL-AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
L AA + VE ++ AA M LD N V L NLYA G D V L
Sbjct: 328 FASMLSAAANMKAFVEGQQMHAAAVMHGLD-ANVFVGSSLINLYAKCGCPSDAKNVFDLS 386
Query: 534 KEQGV 538
E+ +
Sbjct: 387 CEKNI 391
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 250/426 (58%), Gaps = 3/426 (0%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +IS + + G A +F+ ++++S+ +ML G++ GE++ A+ + D M ++VV
Sbjct: 149 NGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVV 208
Query: 207 SWTVMITGYVKN-ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
SW++MI GY K AR F MP D + +MI G+ KVG +E AR +F+++
Sbjct: 209 SWSIMIDGYGKKMGEVNRARVFFDSMPTRD--LVSWNSMIDGYAKVGEMEVAREIFDKML 266
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
K+ +S++ MI GYAQ+ ++EAL LF M+ ++PD ++V +ACS L L++GR
Sbjct: 267 QKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRW 326
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H+ + RN ++ V A++ MY +CG ++ F + N+VSWN +I +G
Sbjct: 327 IHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGF 386
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
++AL F+QM + D + FL +L AC HA V E + +F M VY + P EHY
Sbjct: 387 GKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYG 446
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
CLVD+L RAGQL++ I Q MP + + +WGSLL AC I+ NV L E+ +++ EL
Sbjct: 447 CLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKAD 506
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
+S VYV++SN+YA GMW + R+R LMKE+ + K S IE+ V F+ G+ SH
Sbjct: 507 DSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHIL 566
Query: 566 IDKIHL 571
++I L
Sbjct: 567 REEIEL 572
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 13/371 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV N IS R G+ AR +FD + KD+++WN+++ GY G ++ ++N+F MP
Sbjct: 145 VFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPE 204
Query: 110 KNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
+++VSW+ MI G ++ A +F +MP R+ ++N+MI G+ K G +E A +F++
Sbjct: 205 RDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDK 264
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE-- 226
M ++NVIS++ M+DG+ + + +A L M + + V + G V A +
Sbjct: 265 MLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQG 324
Query: 227 ----LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
L+ + ++ V TA++ + K G + AR +F + ++ VS+N MI G N
Sbjct: 325 RWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMN 384
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG---FEANV 339
G +EAL F+ M + DD + V ACS L+ EG H+ G E +
Sbjct: 385 GFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGL--HIFNQMKGVYRLEPKL 442
Query: 340 SVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
++ + R G + + + + PN W +++ A H + A I ++
Sbjct: 443 EHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAE 502
Query: 399 NGFDPDGITFL 409
D G+ L
Sbjct: 503 LKADDSGVYVL 513
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 11/254 (4%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ +VFVV +I+ +C+ G AR +F+ KD VS+N+M+ GY G E A +F
Sbjct: 141 FGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFD 200
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC-NAVITMYSRC 352
+M D S+ ++ G + V + V N++I Y++
Sbjct: 201 -----EMPERDVVSWSIMIDGYGKKM---GEVNRARVFFDSMPTRDLVSWNSMIDGYAKV 252
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + + F ++ N++SW+ +I +AQH ++AL F QM G PD ++ + +
Sbjct: 253 GEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAV 312
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SAC G +++ L +K ++ T LVD+ + G ++A +I MP E +
Sbjct: 313 SACSQLGALDQG-RWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMP-ERN 370
Query: 473 TGVWGSLLAACVIN 486
W ++ +N
Sbjct: 371 VVSWNVMIVGLGMN 384
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 14/214 (6%)
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A L+F +I + N M+ Y ++ E ALR ++ M + + D+ T V AC A
Sbjct: 63 AELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGA 122
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
+ L EG ++ GF +V V N +I+MY RCG + F +LVSWN++
Sbjct: 123 MCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSM 182
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA-GKVNESMDLFELMVKVY 435
+ + G E A F +M + D +++ ++ G G+VN + F+ M
Sbjct: 183 LGGYVWCGEMENAQNMFDEMP----ERDVVSWSIMIDGYGKKMGEVNRARVFFDSM---- 234
Query: 436 GIIPSSE--HYTCLVDILSRAGQLEKAWQITQGM 467
P+ + + ++D ++ G++E A +I M
Sbjct: 235 ---PTRDLVSWNSMIDGYAKVGEMEVAREIFDKM 265
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 300/558 (53%), Gaps = 17/558 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A + + + AR++FD M +D + WN +I+G+ +N + ++S +F M
Sbjct: 148 LFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLD 207
Query: 110 KNIVSWNCMIAGC------IDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEE 161
+ + +A + R+ + ++ Y +IS + K G+ +
Sbjct: 208 VGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCK 267
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM--SFKNVVSWTV--MITGYVK 217
LF+Q+ + ++ISY AM+ G+ E + A L + S + V S T+ +I Y+
Sbjct: 268 GRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLP 327
Query: 218 NERFCEARELFYRMPDYDKNVF---VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+R L + + V TA+ T +C++ ++ AR LF+ K S+NA
Sbjct: 328 FNHLQLSR-LIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNA 386
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MI+GY QNG+ + A+ LF M+ + P+ T+ S+ +AC+ L L+ G+ H L+
Sbjct: 387 MISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
E+NV V A++ MY++CG I+++ F + N+V+WN +I + HGH ++AL F
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFY 505
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M +G P G+TFLS+L AC H+G V+E ++F M YG P SEHY C+VDIL RA
Sbjct: 506 EMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRA 565
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
GQL A + + MP E VWG+LL AC+I+ N E+ +A+K++ +LDP+N YV+LS
Sbjct: 566 GQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLS 625
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+Y+ + VR ++K++ + K + IEI ++ + F GD SHP I L+
Sbjct: 626 NIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLE 685
Query: 575 RASVQMKSVDDFVEIATS 592
+ + +M+ E T+
Sbjct: 686 KLTGKMREAGYQAETVTT 703
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 171/374 (45%), Gaps = 12/374 (3%)
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-------RALSDYMSFKNV 205
F G + +LF ++ + ++ + ++ GF G + R ++
Sbjct: 56 FFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFT 115
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
++ + +++ER + N+FV +A++ + K E AR +F+ +
Sbjct: 116 YAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP 175
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+D V +N MI+G+++N E+++R+F M+ + + D TL +V TA + LQ G
Sbjct: 176 ERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMG 235
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
L + G ++V V +I++YS+CG + F QI P+L+S+N +I+ + +
Sbjct: 236 IQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHE 295
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E A+ F ++ +G + T + L+ + S + L +K+ GII T
Sbjct: 296 TESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKI-GIILQPSVST 354
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
L + R +++ A Q+ P E W ++++ N L + A +E+ PQ
Sbjct: 355 ALTTVYCRLNEVQFARQLFDESP-EKSLASWNAMISGYTQN---GLTDRAISLFQEMMPQ 410
Query: 506 NSAVYVMLSNLYAA 519
S V ++++ +A
Sbjct: 411 LSPNPVTVTSILSA 424
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-D 299
+T + F +G + + R LF ++ D FN +I G++ NG+ + ++ L++ + K +
Sbjct: 49 ITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTN 108
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++PD+ T +A S L+ G H I +G +N+ V +A++ +Y + +
Sbjct: 109 LRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAR 168
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + + V WNT+I+ F+++ ++E ++ F M G D T ++L+A
Sbjct: 169 KVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQ 228
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
+ M + + + G+ T L+ + S+ G+
Sbjct: 229 EYRLGMGI-QCLASKKGLHSDVYVLTGLISLYSKCGK 264
>gi|18481717|gb|AAL73539.1|AF466200_18 hypothetical protein S250_18C08.29 [Sorghum bicolor]
Length = 679
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 296/534 (55%), Gaps = 43/534 (8%)
Query: 55 AKISALSRAGKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
A I+ L+RAG + A+ ++ +M + D + NA+I GY + G L + +F M +++
Sbjct: 139 AIITGLARAGMLREAQAVYWEMPPRWRDPVGSNAMIWGYLRGGELGMALRVFDGMAARDV 198
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
+SW+ M+ G + +A F+AMPERN ++ +MI G++KHG + LF M R
Sbjct: 199 ISWSAMVDGLCKYGTVSEARRLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRRE 258
Query: 173 ----NVISYTAMLDGFMKKGEVDK-----------------------------------A 193
N+I+ + +LDG + VD+ A
Sbjct: 259 GVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADA 318
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
R+L +M+ K++VSW +ITGYV+N+ +A LF MP+ K+ T+M+ GF G
Sbjct: 319 RSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHVLFKLMPE--KDAISWTSMVVGFANRGW 376
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ + LFE++ KD +++ A+++ NG A+R F M + +P+ + +A
Sbjct: 377 MRESVELFEQMPVKDEIAWAAVMSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSA 436
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
++L +LN+G Q+H + G+ + +V +++TMY++CG + ++ F I P+L++
Sbjct: 437 LASLAMLNQGLQAHAYAVNMGWIFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIAT 496
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N++I AFAQHG E A F++M +G P+ +TFL +L+AC AG V + FE M
Sbjct: 497 NSMITAFAQHGLAEDAFKLFNRMQYDGQRPNHVTFLGILTACARAGLVQHGYNYFESMRS 556
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
VYGI P+ +HYTC+VD+L RAG L +A ++T MP + W +LL++ ++ N++L +
Sbjct: 557 VYGIQPNPDHYTCMVDLLGRAGFLNEALEMTNSMPQKDYPDAWKALLSSSSLHSNLDLAK 616
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
LAA+++ E+DP ++ Y +LSN++++AGM D V++ +K YS I
Sbjct: 617 LAAQRLLEIDPYDATAYTVLSNMFSSAGMKEDEEMVKVAQLSNMASKSPGYSLI 670
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 202/380 (53%), Gaps = 39/380 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA +++ R G+I A+QLFD+M +DVI+W A++T Y G L ++ +F MP++N
Sbjct: 45 NALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNAA 104
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR-- 171
SWN +++ + R A F P +N +Y A+I+G + G L EA ++ +MP
Sbjct: 105 SWNALVSLYLRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAVYWEMPPRW 164
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
R+ + AM+ G+++ GE+ A + D M+ ++V+SW+ M+ G K EAR LF M
Sbjct: 165 RDPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEARRLFEAM 224
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P ++NV T+MI G+ K GM + LLF ++ ++ V N
Sbjct: 225 P--ERNVVSWTSMIRGYVKHGMYRDGLLLFLDMR-REGVQVN------------------ 263
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
MI + + V C+ L++EG Q H L+IR GF ++ + +++I MYSR
Sbjct: 264 ---MITLSV---------VLDGCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSR 311
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G + D+ F ++ ++VSWN++I + Q+ E A + F M + D I++ S+
Sbjct: 312 FGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHVLFKLMP----EKDAISWTSM 367
Query: 412 LSACGHAGKVNESMDLFELM 431
+ + G + ES++LFE M
Sbjct: 368 VVGFANRGWMRESVELFEQM 387
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 168/370 (45%), Gaps = 47/370 (12%)
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+A+P R A NA+++ + + GR+++A +LF++MP R+VIS+TA+L + G + AR
Sbjct: 36 RALPNR--AHLNALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARF 93
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
+ D M +N SW +++ Y++ R A LF + P KN A+ITG + GML
Sbjct: 94 VFDDMPLRNAASWNALVSLYLRAGRPAAAHALFCKAP--AKNAVSYGAIITGLARAGMLR 151
Query: 256 NARLLFERIQP--KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
A+ ++ + P +D V NAMI GY + G ALR+F GM D
Sbjct: 152 EAQAVYWEMPPRWRDPVGSNAMIWGYLRGGELGMALRVFDGMAARD-------------- 197
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
V +A++ + G + ++ F + N+VSW
Sbjct: 198 -------------------------VISWSAMVDGLCKYGTVSEARRLFEAMPERNVVSW 232
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
++I + +HG Y L+ F M G + IT +L C A V+E + LM++
Sbjct: 233 TSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIR 292
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+ G L+ + SR G + A + M + D W SL+ V N +E
Sbjct: 293 M-GFAEDIFLGDSLIIMYSRFGSMADARSLFSFMN-QKDIVSWNSLITGYVQNDMIEDAH 350
Query: 494 LAAKKMRELD 503
+ K M E D
Sbjct: 351 VLFKLMPEKD 360
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 148/300 (49%), Gaps = 18/300 (6%)
Query: 39 NCL-IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CL IR+ + +F+ ++ I SR G ++ AR LF M KD+++WN++ITGY QN +
Sbjct: 287 HCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMI 346
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
+++ LF+ MP K+ +SW M+ G + + ++ + F+ MP ++ + A++S + +G
Sbjct: 347 EDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAVMSSLVANG 406
Query: 158 RLEEATRLFEQMP----RRNVISYTAMLDGF-----MKKGEVDKARALSDYMSFKNVVSW 208
A R F QM R N ++++ +L + +G A A++ F + V
Sbjct: 407 NYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAVH- 465
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI---- 264
++T Y K R EA +F + ++ +MIT F + G+ E+A LF R+
Sbjct: 466 ASLVTMYAKCGRLAEAHRVFSCIS--HPSLIATNSMITAFAQHGLAEDAFKLFNRMQYDG 523
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEG 323
Q + V+F ++ A+ G+ + F M + +QP+ + LNE
Sbjct: 524 QRPNHVTFLGILTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVDLLGRAGFLNEA 583
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 107/250 (42%), Gaps = 23/250 (9%)
Query: 38 SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
++ L +L + + + + G + + +LF+QM KD I W A+++ NG
Sbjct: 349 AHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAVMSSLVANGNY 408
Query: 98 QESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAM 149
+ F M + N V+++C+++ ++ ++A + ++
Sbjct: 409 VSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAVHASL 468
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF----KNV 205
++ + K GRL EA R+F + ++I+ +M+ F + G + A L + M + N
Sbjct: 469 VTMYAKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLFNRMQYDGQRPNH 528
Query: 206 VSWTVMIT-----GYVKN--ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
V++ ++T G V++ F R ++ P+ D T M+ + G L A
Sbjct: 529 VTFLGILTACARAGLVQHGYNYFESMRSVYGIQPNPDH----YTCMVDLLGRAGFLNEAL 584
Query: 259 LLFERIQPKD 268
+ + KD
Sbjct: 585 EMTNSMPQKD 594
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/572 (31%), Positives = 295/572 (51%), Gaps = 59/572 (10%)
Query: 57 ISALSRAGKISAARQLFDQMTTK-----DVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
+ A + G + +Q+ Q+ K D+ NA++ Y NG L+ S LF+S+P ++
Sbjct: 262 VQACAELGSLKLGKQIH-QLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRD 320
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMP-------ERNTATYNAMI----SGFLKHGRLE 160
WN MI+ ++A D F M ER +M SG LK L
Sbjct: 321 APLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLH 380
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ + R + A+L + + V+ + + D M +++SW MI +N
Sbjct: 381 --AHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTL 438
Query: 221 FCEARELFYRMP------------------------DYDKNVF-------------VVTA 243
+A ELF RM D+ +++ + TA
Sbjct: 439 RAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTA 498
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+ + G AR LFE +D +S+NAMIA Y +N A +AL LF MI + +P+
Sbjct: 499 LADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMIS-EAEPN 557
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA--NVSVCNAVITMYSRCGGILDSELA 361
T+++V ++ + L L +G+ H V R GF ++S+ NA ITMY+RCG + +E
Sbjct: 558 SVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENI 617
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F+ + N++SWN +IA + +G A++ FSQM +GF P+G+TF+S+LSAC H+G +
Sbjct: 618 FKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFI 677
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ LF MV+ + + P HY+C+VD+L+R G +++A + MP E D VW +LL+
Sbjct: 678 EMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLS 737
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
+C + + + +K+ +L+P N+ YV+LSN+YA AG+W +V R+R +KE+G+ K
Sbjct: 738 SCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKP 797
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SWI + N+VH F GD SHP DKI+ +L
Sbjct: 798 PGISWIIVKNQVHCFSAGDRSHPQSDKIYAKL 829
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 234/509 (45%), Gaps = 53/509 (10%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
A +A+ R I + Q D M DV A++ Y + GF+++++ +F +M +++V
Sbjct: 64 AAQNAVERGKSIHRSIQGTDLM--DDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVL 121
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERN----TATYNAMI-----SGFLKHGRLEEATRL 165
WN M+ G + ++A + M N + T A++ + L+ GR L
Sbjct: 122 WNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCL 181
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
M N TA++ GF + ++ L D M +N+VSW MI+GY + +A
Sbjct: 182 RNGMFDSNPHVATALI-GFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKAL 240
Query: 226 ELFYRMP-------------------------------------DYDKNVFVVTAMITGF 248
ELF +M ++ ++++++ A++ +
Sbjct: 241 ELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMY 300
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
G LE++ LFE + +D +N+MI+ YA G EEA+ LF M ++ D+ T+V
Sbjct: 301 SNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVV 360
Query: 309 SVFTACSALQL-LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
+ + C L L +G+ H VI++G + S+ NA+++MY+ + + F ++
Sbjct: 361 IMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKG 420
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+++SWNT+I A A++ +A F +M + P+ T +S+L+AC ++ +
Sbjct: 421 VDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSI 480
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
++K + I + T L D+ G A + +G P + D W +++A+ V N
Sbjct: 481 HGYVMK-HSIEINQPLRTALADMYMNCGDEATARDLFEGCP-DRDLISWNAMIASYVKNN 538
Query: 488 NVELGELAAKKM-RELDPQNSAVYVMLSN 515
L +M E +P + + +LS+
Sbjct: 539 QAHKALLLFHRMISEAEPNSVTIINVLSS 567
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 185/420 (44%), Gaps = 52/420 (12%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
+ NA +S + + + +++FD+M D+I+WN +I +N ++ LF+ M
Sbjct: 394 LGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESE 453
Query: 112 I---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
I + C C+D R + ++ E N A+ ++ G A
Sbjct: 454 IKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSI-EINQPLRTALADMYMNCGDEATA 512
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVSWTVMITGYVKNE 219
LFE P R++IS+ AM+ ++K + KA L M + N V+ +++ +
Sbjct: 513 RDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEAEPNSVTIINVLSSFTHLA 572
Query: 220 RFCEARELF----YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ + L R ++ + A IT + + G L++A +F+ + ++ +S+NAM
Sbjct: 573 TLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAM 632
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAGY NG +A+ FS M++ +P+ T VSV +ACS + G Q F
Sbjct: 633 IAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQL--------F 684
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ V N +P LV ++ I+ A+ G ++A F
Sbjct: 685 HSMVQDFNV----------------------TPELVHYSCIVDLLARGGCIDEAREFIDS 722
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M + +PD + +LLS+C ++ +FE + K+ + ++ +Y L ++ + AG
Sbjct: 723 MPI---EPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPM--NAGNYVLLSNVYATAG 777
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%)
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+IQ KD +N++I A + L ++ M + + P++ TL V AC+A +
Sbjct: 12 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+ H + +V V AV+ Y +CG + D+ F + ++V WN ++ +
Sbjct: 72 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
G YE+A++ +MG P+ T ++LL AC A ++
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASEL 170
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 148/354 (41%), Gaps = 42/354 (11%)
Query: 86 AIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM---PERN 142
A+ Y G +++LF+ P ++++SWN MIA + N++ A F M E N
Sbjct: 498 ALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEAEPN 557
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRR------NVISYTAMLDGFMKKGEVDKARAL 196
+ T ++S F L + L + RR ++ A + + + G + A +
Sbjct: 558 SVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENI 617
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGML 254
+ +N++SW MI GY N R +A F +M + + N ++++ G +
Sbjct: 618 FKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFI 677
Query: 255 ENARLLFE------RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
E LF + P + V ++ ++ A+ G +EA M ++PD +
Sbjct: 678 EMGLQLFHSMVQDFNVTP-ELVHYSCIVDLLARGGCIDEAREFID---SMPIEPDASVWR 733
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI--TMYSRCGGILDSE-----LA 361
++ ++C A ++ +Q+ + + ++ N V+ +Y+ G L+ L
Sbjct: 734 ALLSSCRAY---SDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLK 790
Query: 362 FRQIHSPNLVSWNTI---IAAFA--QHGH------YEKALIFFSQMGLNGFDPD 404
+ + P +SW + + F+ H Y K I S M G+DPD
Sbjct: 791 EKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPD 844
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 268/534 (50%), Gaps = 45/534 (8%)
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL 154
G SK +F + NI WN MI G + D DDA + +M N I L
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 155 KHGRLEEATRLFEQMPR--------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
K + RL ++ +V T++L ++K D A + D + KNVV
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181
Query: 207 SWTVMITGYVKNERFCEARELFYRM------PD--------------------------- 233
SWT +ITGY+ + F EA F ++ PD
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241
Query: 234 ----YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+NVFV T+++ + K G LE A L+F + KD VS++ MI GYA NG+ ++AL
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF M +++PD T+V V +AC+ L L+ G + L+ RN F +N + A+I MY
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMY 361
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
S+CG + + F + + V WN ++ + +GH + FS + +G PD TF+
Sbjct: 362 SKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFI 421
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
LL C H G VNE F M +V+ + PS EHY C+VD+L RAG L +A Q+ MP
Sbjct: 422 GLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPM 481
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ + VWG+LL C ++ + L E KK+ EL+P NS YV LSN+Y+ W + ++
Sbjct: 482 KPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKI 541
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
R MKEQ + K A SWIEI VH FL GD SH +KI+ +L ++K+V
Sbjct: 542 RSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAV 595
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 16/357 (4%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+++ N ++ L G + +F Q+ N+ + M+ G + K D A L
Sbjct: 45 DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGS 104
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRM----------PDYDKNVFVVTAMITGFC 249
M + I +K C AR+L R+ YD +VFV T++++ +
Sbjct: 105 MRGGGFLPNNFTIPFVLKA---C-ARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYV 160
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K ++A +F+ I K+ VS+ A+I GY +G EA+ F +++M ++PD +LV
Sbjct: 161 KCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVK 220
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
V AC+ L G + +G NV V +++ MY +CG + + L F + +
Sbjct: 221 VLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKD 280
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+VSW+T+I +A +G ++AL F QM PD T + +LSAC G ++ +
Sbjct: 281 IVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASS 340
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LM + + + T L+D+ S+ G + +AW+I M + D VW +++ +N
Sbjct: 341 LMDR-NEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-KKDRVVWNAMMVGLSMN 395
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 156/352 (44%), Gaps = 49/352 (13%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV ++++ Y + ++ +F +P KN+VSW +I G I + +A F+ +
Sbjct: 148 DVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLL 207
Query: 140 ERNTATYN-AMISGFLKHGRLEEATRLFEQMPR--------RNVISYTAMLDGFMKKGEV 190
E + +++ RL + T E + R RNV T++LD ++K G +
Sbjct: 208 EMGLKPDSFSLVKVLAACARLGDCTS-GEWIDRYISDSGMGRNVFVATSLLDMYVKCGNL 266
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----------- 233
++A + M K++VSW+ MI GY N +A +LF++M PD
Sbjct: 267 ERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC 326
Query: 234 ---------------YDKNVFVV-----TAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
D+N F+ TA+I + K G + A +F ++ KD V +N
Sbjct: 327 ATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWN 386
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AM+ G + NG A+ LFS + K ++PD+ T + + C+ +NEGRQ + R
Sbjct: 387 AMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRV 446
Query: 334 -GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
++ ++ + R G + ++ +L PN V W ++ H
Sbjct: 447 FSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 2/188 (1%)
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ L N+ + H ++R + + + N ++ G S+L F Q+ PN+ WN
Sbjct: 24 NGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWN 83
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+I ++ A+ + M GF P+ T +L AC V + + L+VK
Sbjct: 84 TMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKA 143
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
G T L+ + + + A ++ +P + + W +++ + + +
Sbjct: 144 -GYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKNVVSWTAIITGYISSGHFREAIG 201
Query: 495 AAKKMREL 502
A KK+ E+
Sbjct: 202 AFKKLLEM 209
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 312/566 (55%), Gaps = 23/566 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV NA + S+ G I A+ LF + KD I+WNA+ G QN +E+ + + M +
Sbjct: 461 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRL 520
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
I VS++ I C N R + + + N A +++I + KHG +E
Sbjct: 521 HGITPDDVSFSTAINAC-SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE 579
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMSFKNVVSWTVMITGY 215
+ ++F Q+ +++ A++ GF++ D+A + L D + + V+++ +++G
Sbjct: 580 SSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLK-PSSVTFSSILSGC 638
Query: 216 VKNERFCEARELF-YRMPD---YDKNVFVVTAMITGFCKVGMLENA-RLLFERIQPKDCV 270
+ +++ Y + YD + V+ + + K MLE+A +LL E K+
Sbjct: 639 SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVS-LAGIYLKSKMLEDANKLLTEMPDHKNLF 697
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+ A+I+GYAQNG + +L F M +++ D+AT SV ACS + +G++ H L+
Sbjct: 698 EWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLI 757
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKA 389
++GF + + +A+I MYS+CG ++ S AF+++ + +++ WN++I FA++G+ ++A
Sbjct: 758 TKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEA 817
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L+ F +M PD +TFL +L AC H+G ++E F M KVYG+ P +HY C +D
Sbjct: 818 LLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFID 877
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L R G L++A + +PF D VW + LAAC ++ + E G++AA+K+ EL+PQ S+
Sbjct: 878 LLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSST 937
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
YV+LS+L+AA G W + R M+E+GV K SWI +GNK FL D HP +I
Sbjct: 938 YVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRI 997
Query: 570 HLELKRASVQMKSVDDFVEIATSWSS 595
+ L + MK +D E +S+
Sbjct: 998 YEMLGDLTGMMKKDNDIDEYGLLYSA 1023
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 208/425 (48%), Gaps = 44/425 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF A + ++ G + AR++FD + D I W+++I Y + G QE+ LF M
Sbjct: 193 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM-- 250
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
D++ A D T +IS GRL+ AT L ++M
Sbjct: 251 ----------------DKMGSAPD---------QVTLVTIISTLASSGRLDHATALLKKM 285
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV---------MITGYVKNER 220
P + +++ A++ G + G L +K++ SW + M++ +
Sbjct: 286 PTPSTVAWNAVISGHAQSGLEFNVLGL-----YKDMRSWGLWPTRSTFASMLSAAANMKA 340
Query: 221 FCEARELFYR--MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
F E +++ M D NVFV +++I + K G +A+ +F+ K+ V +NAM+ G
Sbjct: 341 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 400
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
+ QN + EEA+R+F M++ +Q D+ T VS+ AC+ L G+Q H + I+N + +
Sbjct: 401 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDIS 460
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+ V NA + MYS+ G I D++ F I + +SWN + AQ+ E+A+ +M L
Sbjct: 461 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRL 520
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+G PD ++F + ++AC + + L +K YGI + + L+D+ S+ G +E
Sbjct: 521 HGITPDDVSFSTAINACSNIRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVE 579
Query: 459 KAWQI 463
+ +I
Sbjct: 580 SSRKI 584
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 18/305 (5%)
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQ 301
+++ +CK G + A + + +++++ +A++G + L F + +
Sbjct: 96 SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGR 155
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD L V +ACS + +L GRQ H V+++GF ++V A++ MY++CG + ++
Sbjct: 156 PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRV 215
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F I P+ + W+++IA + + G Y++AL FS+M G PD +T ++++S +G++
Sbjct: 216 FDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRL 275
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS--- 478
+ + L + M PS+ + ++ +++G + + M G+W +
Sbjct: 276 DHATALLKKMP-----TPSTVAWNAVISGHAQSGLEFNVLGLYKDM---RSWGLWPTRST 327
Query: 479 ----LLAACVINLNVELGEL-AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
L AA + VE ++ AA M LD N V L NLYA G D V L
Sbjct: 328 FASMLSAAANMKAFVEGQQMHAAAVMHGLD-ANVFVGSSLINLYAKCGCPSDAKNVFDLS 386
Query: 534 KEQGV 538
E+ +
Sbjct: 387 CEKNI 391
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 285/549 (51%), Gaps = 48/549 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
+V +++ Y + G + +++ +F MP +N SW+ M+AG ++AFD F+ M
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 211
Query: 140 ERN----------------------------------------TATYNAMISGFLKHGRL 159
E + N++++ + K G +
Sbjct: 212 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 271
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
A +FE RN I+++AM+ G+ + GE D A ++ M G +
Sbjct: 272 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331
Query: 220 RFC-------EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+A L ++ ++ ++V +A++ + K G + +A+ F+++ D V +
Sbjct: 332 SDLGALAVGKQAHGLMVKL-GFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLW 390
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
AM++G+ QNG EEAL L++ M K + P +T+ S AC+ + L G+Q H +++
Sbjct: 391 TAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK 450
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
G V +A+ TMYS+CG + D FR+I ++++WN+II+ F+Q+G AL
Sbjct: 451 YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDL 510
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M + G PD ITF+++L AC H G V+ + F LM K YG+ P +HY C+VDILS
Sbjct: 511 FEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILS 570
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG L++A + + + T +W +L AC + ++G A +++ EL +S+ Y++
Sbjct: 571 RAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYIL 630
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
LSN+YA+ W DV RVR LM+ +GV K SW+E+ ++VH F+ G+ HP + I+ +
Sbjct: 631 LSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQ 690
Query: 573 LKRASVQMK 581
L+R + MK
Sbjct: 691 LRRLAKHMK 699
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 154/296 (52%), Gaps = 8/296 (2%)
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
++P NV+V T+++ +CK+G++ +AR +F+ + ++ S++ M+AGYA +EEA
Sbjct: 145 KIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAF 204
Query: 290 RLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
LF M++ + + +V +A S L G Q H L++++G VSV N+++TM
Sbjct: 205 DLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTM 264
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y++ G + + F N ++W+ +I +AQ+G + A+ FSQM GF P TF
Sbjct: 265 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 324
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+ +L+A G + LMVK+ G + LVD+ ++ G + A + +
Sbjct: 325 VGVLNASSDLGALAVGKQAHGLMVKL-GFEVQIYVKSALVDMYAKCGCIADAKEGFDQL- 382
Query: 469 FEADTGVWGSLLAACVINLNVELG-ELAAKKMRE-LDPQNSAVYVMLSNLYAAAGM 522
+E D +W ++++ V N E L A+ +E + P S + S L A AG+
Sbjct: 383 YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTI---ASGLRACAGI 435
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 156/324 (48%), Gaps = 23/324 (7%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
+V V N+ ++ ++AG + AA +F+ ++ ITW+A+ITGY QNG + ++F M
Sbjct: 254 FVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMH 313
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLE 160
G ++ A + E +A++ + K G +
Sbjct: 314 AAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIA 373
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV-SWTVMITGYVKNE 219
+A F+Q+ +++ +TAM+ G ++ GE ++A L M + ++ S + + +G
Sbjct: 374 DAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGL---- 429
Query: 220 RFC-------EARELFYRMPDYDKNVF--VVTAMITGFCKVGMLENARLLFERIQPKDCV 270
R C ++L ++ Y + V +A+ T + K G LE+ +F RI +D +
Sbjct: 430 RACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVI 489
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++N++I+G++QNG AL LF M PD+ T +++ ACS + L++ G + L+
Sbjct: 490 AWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLM 549
Query: 331 IRN-GFEANVSVCNAVITMYSRCG 353
++ G + ++ + SR G
Sbjct: 550 TKDYGLTPRLDHYACMVDILSRAG 573
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L ++V +A + ++ G I+ A++ FDQ+ D++ W A+++G+ QNG +E+
Sbjct: 347 MVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEA 406
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER--------NTATYNAMISG 152
L+ M + I+ IA + A + + + + +A+ +
Sbjct: 407 LTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTM 466
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
+ K G LE+ +F ++P R+VI++ +++ GF + G + A L + M + +
Sbjct: 467 YSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTI 520
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V +A + S+ G + +F ++ +DVI WN+II+G+ QNG + +LF+ M ++
Sbjct: 459 VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEG 518
Query: 112 IVSWNC----MIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
+ N ++ C +D ++YF M + T Y M+ + G L+EA
Sbjct: 519 TIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA 578
Query: 163 TRLFEQM 169
E +
Sbjct: 579 KDFIESI 585
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 290/565 (51%), Gaps = 49/565 (8%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---------------- 107
G AR+LFD++ ++ WN +I GY + F Q +L+ M
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 108 ------------------PVKNIVSWNCMIAGCIDN-----DRIDDAFDYFQAMPERNTA 144
+K+ + +N + + ++D A F P+ +
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 206
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA----MLDGFMKKGEVDKARALSDYM 200
T+N +IS + K G+ EE+ RLF M + V+ T +L K ++ + + Y+
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266
Query: 201 S----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
N+V MI Y A +F M + D + T +++GF +G ++
Sbjct: 267 KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRD--IISWTTIVSGFTNLGEIDV 324
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR F+++ KD VS+ AMI GY ++ +EAL LF M +++PD+ T+VSV TAC+
Sbjct: 325 ARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAH 384
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L G + RN + ++ V NA+I MY +CG + +E FR++ + +W +
Sbjct: 385 LGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAM 444
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I A +GH EKAL FS M PD IT++ +LSAC H G V++ F M +G
Sbjct: 445 IVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHG 504
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
I P+ HY CLVD+L+RAG+L++A+++ + MP +A++ VWG+LLA C + ++ E+
Sbjct: 505 IEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVV 564
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
K++ EL+P N AVYV+L N+YAA W D+ +R +M ++G+ K S IE+ +VH F
Sbjct: 565 KQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEF 624
Query: 557 LGGDMSHPCIDKIHLELKRASVQMK 581
+ GD SHP I +L + + +K
Sbjct: 625 VAGDRSHPQTKNIDAKLDKMTQDLK 649
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 209/434 (48%), Gaps = 51/434 (11%)
Query: 48 QY-VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
QY VFV+ A + G++ AR +FD DVITWN II+ Y + G +ES+ LF
Sbjct: 171 QYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLV 230
Query: 107 MPVKNI----VSWNCMIAGC--IDNDRIDDAFDYF--QAMPERNTATYNAMISGFLKHGR 158
M K + V+ +++ C + + R + E N NAMI + G
Sbjct: 231 MEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGE 290
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
++ A +F M R++IS+T ++ GF GE+D AR D M K+ VSWT MI GY+++
Sbjct: 291 MDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS 350
Query: 219 ERFCEARELFYRM------PD--------------------------YDKN-----VFVV 241
RF EA ELF M PD D+N +FV
Sbjct: 351 NRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR 410
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
A+I + K G ++ A +F + +D ++ AMI G A NG E+AL +FS M+K +
Sbjct: 411 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 470
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHV-LVIRNGFEANVSVCNAVITMYSRCGGILDS-E 359
PD+ T + V +AC+ L+++GR+ + + ++G E N++ ++ + +R G + ++ E
Sbjct: 471 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 530
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD-GITFLSLLSACGHA 418
+ N + W ++A + + A + Q + +PD G ++ L +
Sbjct: 531 VIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ--ILELEPDNGAVYVLLCNIYAAC 588
Query: 419 GKVNESMDLFELMV 432
+ N+ +L ++M+
Sbjct: 589 KRWNDLRELRQMMM 602
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 198/448 (44%), Gaps = 68/448 (15%)
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTV 210
++G + A RLF+++P N+ + M+ G+ + +L M + V ++
Sbjct: 85 EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPF 144
Query: 211 MITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+ G+ ++ R+L + + NVFV TA++ + G L+ AR +F+ D
Sbjct: 145 LFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKAD 204
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
+++N +I+ Y + G EE+ RLF M + P TLV V +ACS L+ L G++ H
Sbjct: 205 VITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 264
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELA-FRQIHSPNLVSWNTIIAAFAQHGH-- 385
V E+N+ + NA+I MY+ CG +DS L FR +++ +++SW TI++ F G
Sbjct: 265 YVKNCKVESNLVLENAMIDMYADCGE-MDSALGIFRSMNNRDIISWTTIVSGFTNLGEID 323
Query: 386 -----------------------------YEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+++AL F M PD T +S+L+AC
Sbjct: 324 VARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACA 383
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
H G + E + + I L+D+ + G ++KA I + M + D W
Sbjct: 384 HLGAL-ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTW 441
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
+++ +N + E + LD M SN+ A+ + ++T +
Sbjct: 442 TAMIVGLAVNGHGE---------KALD--------MFSNMLKASILPDEITYI------- 477
Query: 537 GVTKQCAYS-WIEIGNKVHYFLGGDMSH 563
GV C ++ ++ G K YFL H
Sbjct: 478 GVLSACTHTGLVDKGRK--YFLRMTSQH 503
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 268/534 (50%), Gaps = 45/534 (8%)
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL 154
G SK +F + NI WN MI G + D DDA + +M N I L
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 155 KHGRLEEATRLFEQMPR--------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
K + RL ++ +V T++L ++K D A + D + KNVV
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181
Query: 207 SWTVMITGYVKNERFCEARELFYRM------PD--------------------------- 233
SWT +ITGY+ + F EA F ++ PD
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241
Query: 234 ----YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+NVFV T+++ + K G LE A L+F + KD VS++ MI GYA NG+ ++AL
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
LF M +++PD T+V V +AC+ L L+ G + L+ RN F +N + A+I MY
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMY 361
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
S+CG + + F + + V WN ++ + +GH + FS + +G PD TF+
Sbjct: 362 SKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFI 421
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
LL C H G VNE F M +V+ + PS EHY C+VD+L RAG L +A Q+ MP
Sbjct: 422 GLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPM 481
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ + VWG+LL C ++ + L E KK+ EL+P NS YV LSN+Y+ W + ++
Sbjct: 482 KPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKI 541
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
R MKEQ + K A SWIEI VH FL GD SH +KI+ +L ++K+V
Sbjct: 542 RSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAV 595
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 169/357 (47%), Gaps = 16/357 (4%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+++ N ++ L G + +F Q+ N+ + M+ G + K D A L
Sbjct: 45 DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGS 104
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRM----------PDYDKNVFVVTAMITGFC 249
M + I +K C AR+L R+ YD +VFV T++++ +
Sbjct: 105 MRGGGFLPNNFTIPFVLKA---C-ARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYV 160
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K ++A +F+ I K+ VS+ A+I GY +G EA+ F +++M ++PD +LV
Sbjct: 161 KCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVK 220
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
V AC+ L G + +G NV V +++ MY +CG + + L F + +
Sbjct: 221 VLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKD 280
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+VSW+T+I +A +G ++AL F QM PD T + +LSAC G ++ +
Sbjct: 281 IVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASS 340
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LM + + + T L+D+ S+ G + +AW+I M D VW +++ +N
Sbjct: 341 LMDR-NEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-RKDRVVWNAMMVGLSMN 395
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 156/352 (44%), Gaps = 49/352 (13%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV ++++ Y + ++ +F +P KN+VSW +I G I + +A F+ +
Sbjct: 148 DVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLL 207
Query: 140 ERNTATYN-AMISGFLKHGRLEEATRLFEQMPR--------RNVISYTAMLDGFMKKGEV 190
E + +++ RL + T E + R RNV T++LD ++K G +
Sbjct: 208 EMGLKPDSFSLVKVLAACARLGDCTS-GEWIDRYISDSGMGRNVFVATSLLDMYVKCGNL 266
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----------- 233
++A + M K++VSW+ MI GY N +A +LF++M PD
Sbjct: 267 ERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC 326
Query: 234 ---------------YDKNVFVV-----TAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
D+N F+ TA+I + K G + A +F ++ KD V +N
Sbjct: 327 ATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWN 386
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AM+ G + NG A+ LFS + K ++PD+ T + + C+ +NEGRQ + R
Sbjct: 387 AMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRV 446
Query: 334 -GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
++ ++ + R G + ++ +L PN V W ++ H
Sbjct: 447 FSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 2/188 (1%)
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ L N+ + H ++R + + + N ++ G S+L F Q+ PN+ WN
Sbjct: 24 NGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWN 83
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+I ++ A+ + M GF P+ T +L AC V + + L+VK
Sbjct: 84 TMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKA 143
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
G T L+ + + + A ++ +P + + W +++ + + +
Sbjct: 144 -GYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKNVVSWTAIITGYISSGHFREAIG 201
Query: 495 AAKKMREL 502
A KK+ E+
Sbjct: 202 AFKKLLEM 209
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/535 (31%), Positives = 276/535 (51%), Gaps = 45/535 (8%)
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-- 138
V +A++ Y +NG + E + +F MP++N+VSW +I G + +A YF M
Sbjct: 151 VFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWR 210
Query: 139 --PERNTATYNAMISGFLKHGRLEEATRLFEQMPRR--NVISYTA--MLDGFMKKGEVDK 192
E ++ T+ + G L + Q ++ +V S+ A + + K G+++
Sbjct: 211 SRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEY 270
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITG--- 247
L + MS ++VVSWT +IT V+ + A + F RM + D N + A+I+G
Sbjct: 271 GLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCAN 330
Query: 248 --------------------------------FCKVGMLENARLLFERIQPKDCVSFNAM 275
+ K G L ++ ++F + +D VS++ +
Sbjct: 331 LARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTI 390
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAGY Q G EA L S M +P + L SV +AC + +L G+Q H V+ G
Sbjct: 391 IAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGL 450
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E V +A+I MY +CG I ++ F + ++VSW +I +A+HG+ + + F +
Sbjct: 451 EHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEK 510
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
+ G PD +TF+ +LSAC HAG V+ F M K Y I PS EHY C++D+L RAG
Sbjct: 511 IPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAG 570
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L A + + MPF D VW +LL AC ++ +VE G A+++ +L+P + ++ L+N
Sbjct: 571 RLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLAN 630
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
+YA+ G WR+ +R LMK +GV K+ +SWI++ + V F+ GD SHP + I+
Sbjct: 631 IYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIY 685
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 220/430 (51%), Gaps = 24/430 (5%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN- 111
+N ++ L + G + AR++FD+M+ KD I+W +I+GY E+ LF++M V++
Sbjct: 52 SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111
Query: 112 ------IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEAT 163
I+S G + + + + + +A++ + K+G++ E
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKA--------RALSDYMSFKNVVSWTVMITGY 215
R+F +MP RNV+S+TA++ G ++ G +A R+ +Y S+ ++ + +
Sbjct: 172 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSY----TFAIALKAC 227
Query: 216 VKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ RE+ + +D + FV + T + K G LE LFE++ +D VS+
Sbjct: 228 ADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWT 287
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+I Q G E A++ F M + D+ P++ T +V + C+ L + G Q H L++
Sbjct: 288 TIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHL 347
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G A++SV N+++TMY++CG + S + F ++ ++VSW+TIIA + Q GH +A
Sbjct: 348 GLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELL 407
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
S M + G P S+LSACG+ + L ++ + G+ ++ + L+++ +
Sbjct: 408 SWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSI-GLEHTAMVLSALINMYCK 466
Query: 454 AGQLEKAWQI 463
G +E+A +I
Sbjct: 467 CGSIEEASRI 476
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 172/377 (45%), Gaps = 23/377 (6%)
Query: 122 CID-------NDRIDDAFDYFQA--MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
CID ND + + +PE N + +K G L A R+F++M ++
Sbjct: 24 CIDLQVLERSNDNLSQNIHFISQTDLPESNK-----QLKELVKTGHLGNARRMFDKMSQK 78
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKN-------VVSWTVMITGYVKNERFCEAR 225
+ IS+T ++ G++ + +A L M ++ ++S G + + E
Sbjct: 79 DEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELL 138
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ +VFV +A++ + K G + R +F + ++ VS+ A+I G + G
Sbjct: 139 HGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYN 198
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+EAL FS M + ++ D T AC+ LN GR+ H ++ GF+ + V N +
Sbjct: 199 KEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTL 258
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
TMY++CG + F ++ ++VSW TII Q G E A+ F +M + P+
Sbjct: 259 ATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNE 318
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
TF +++S C + ++ L L++ + G+ S ++ + ++ GQL + I
Sbjct: 319 YTFAAVISGCANLARIEWGEQLHALILHL-GLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 466 GMPFEADTGVWGSLLAA 482
M D W +++A
Sbjct: 378 EMT-RRDIVSWSTIIAG 393
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/417 (37%), Positives = 242/417 (58%), Gaps = 37/417 (8%)
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
T+++ + K GE++ A + D M+ ++V SW ++ GY K+
Sbjct: 173 TSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKS------------------- 213
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
G ++ A +FER+ ++ VS+ MI+GY+Q+G+A++AL LF M+K
Sbjct: 214 --------------GCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVK 259
Query: 298 MD--MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
D ++P+ T++SV AC+ L L GRQ H L R G +N SV A+ MY++CG +
Sbjct: 260 EDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSL 319
Query: 356 LDSELAFRQIH--SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+D+ F +++ NL++WNT+I A+A +GH +A+ F +M G PD ITF LLS
Sbjct: 320 VDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLS 379
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
C H+G V+ + F M Y I P EHY C+ D+L RAG+L +A ++ MP A
Sbjct: 380 GCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGP 439
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+WGSLLAAC + N+E+ E AA+K+ L+P+N+ YV+LSN+YA AG W++V ++R ++
Sbjct: 440 SIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIV 499
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIA 590
K QG K SWIEI K H FLGGD SHP +I++ L+ +MK+ F + +
Sbjct: 500 KSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTS 556
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 149/315 (47%), Gaps = 29/315 (9%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ ++I Y + G + ++ +F +M ++++ SWN ++AG + ID A F+ MP
Sbjct: 168 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP 227
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
RN ++ MISG+ + G ++A LF++M + + + ++
Sbjct: 228 WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKED-------------------SGVRPNW 268
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
++ +V+ ++ ER + EL RM + N V+ A+ + K G L +AR
Sbjct: 269 VTIMSVLPACAQLSTL---ERGRQIHELACRM-GLNSNASVLIALTAMYAKCGSLVDARN 324
Query: 260 LFERI--QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
F+++ K+ +++N MI YA G +A+ F MI+ +QPDD T + + CS
Sbjct: 325 CFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHS 384
Query: 318 QLLNEGRQ--SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS-WN 374
L++ G + +H+ + V V + R G + ++ ++ P S W
Sbjct: 385 GLVDVGLKYFNHMSTTYS-INPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWG 443
Query: 375 TIIAAFAQHGHYEKA 389
+++AA +H + E A
Sbjct: 444 SLLAACRKHRNLEMA 458
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 35/255 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V + I + G+I+ A ++FD MT +DV +WNA++ GY ++G + + +F+ MP
Sbjct: 169 LYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPW 228
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+NIVSW MI+G + A F M + ++
Sbjct: 229 RNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGV------------------------ 264
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDY---MSFKNVVSWTVMITG-YVKNERFCEAR 225
R N ++ ++L + +++ R + + M + S + +T Y K +AR
Sbjct: 265 -RPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDAR 323
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER-----IQPKDCVSFNAMIAGYA 280
F ++ +KN+ MIT + G A F IQP D ++F +++G +
Sbjct: 324 NCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDD-ITFTGLLSGCS 382
Query: 281 QNGVAEEALRLFSGM 295
+G+ + L+ F+ M
Sbjct: 383 HSGLVDVGLKYFNHM 397
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 127/279 (45%), Gaps = 47/279 (16%)
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K+G +A +L +QP V + M+A YA +G + ++ +F+G+ P
Sbjct: 87 KLGHQVHAHMLLRGLQPTALVG-SKMVAFYASSGDIDSSVSVFNGIGDYFTFP------- 138
Query: 310 VFTACSALQLLN--EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
F S+++LL+ G+ H L++R G + ++ V ++I +Y +CG I D+ F +
Sbjct: 139 -FVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTI 197
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
++ SWN ++A + + G + AL F +M +++ +++S +G +++ L
Sbjct: 198 RDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI----VSWTTMISGYSQSGLAQQALSL 253
Query: 428 FELMVKV-YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
F+ MVK G+ P+ ++ ++ LE+ QI + AC +
Sbjct: 254 FDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE---------------LACRMG 298
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
LN N++V + L+ +YA G D
Sbjct: 299 LN----------------SNASVLIALTAMYAKCGSLVD 321
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 17/148 (11%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT--TKDVITWNAIITGYWQ 93
H C + L S V + A + ++ G + AR FD++ K++I WN +IT Y
Sbjct: 291 HELACRMGLNSNASVLI--ALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYAS 348
Query: 94 NGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
G ++ + F+ M I +++ +++GC + +D YF M T + N
Sbjct: 349 YGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM--STTYSINPR 406
Query: 150 ISGFL-------KHGRLEEATRLFEQMP 170
+ + + GRL EA++L +MP
Sbjct: 407 VEHYACVADLLGRAGRLAEASKLVGEMP 434
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 289/540 (53%), Gaps = 18/540 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+ V+N I+ S+ G + AR++FD+M+ +++++W+AII+GY Q G + NLF M
Sbjct: 38 IIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMRI 97
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLEEATR 164
V N + +I+ C + + + NA+IS ++K G +A
Sbjct: 98 VPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALL 157
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+ M N +SY A++ GF++ + +K M K +G + C +
Sbjct: 158 VHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLG---ICTS 214
Query: 225 RELFYR---------MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ F+R + + + F+ +IT + K ++E A +F I+ KD +S+N +
Sbjct: 215 YDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTL 274
Query: 276 IAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+ E ALR+F M+ + ++PDD T V AC+ L + G+Q H +IR
Sbjct: 275 VTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTR 334
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+V V NA++ MY++CG I +S FR+ NLVSWNTIIAAF HG +AL F
Sbjct: 335 QYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFE 394
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M G PD +TF+ LL+AC HAG V E F M + YGI P+ EH++CL+D+L RA
Sbjct: 395 KMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRA 454
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G+L++A + + +PF D + GSLL+AC ++ ++ +GE A ++ +L P ++ YV+LS
Sbjct: 455 GRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLS 514
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
NLYA+ MW V ++K G+ K+ +S I++ F GD+SH I++I +K
Sbjct: 515 NLYASDEMWGGVAEAWKMLKYSGLKKEPGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIK 574
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 5/247 (2%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
++ V +I + K G + AR +F+ + ++ VS++A+I+GY Q G AL LFS
Sbjct: 37 DIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQPLLALNLFS--- 93
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+M + P++ SV +AC++L L++G Q H ++ G + V NA+I+MY +CG
Sbjct: 94 QMRIVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCT 153
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ L + PN VS+N +IA F ++ EK + F M GF PD TF LL C
Sbjct: 154 DALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICT 213
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
M L M+K+ + S+ ++ + S+ +E+A ++ G+ E D W
Sbjct: 214 SYDDFWRGMQLHCQMIKL-NLEDSAFIGNVIITMYSKFNLIEEAEKVF-GLIKEKDLISW 271
Query: 477 GSLLAAC 483
+L+ AC
Sbjct: 272 NTLVTAC 278
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 171/376 (45%), Gaps = 51/376 (13%)
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
A I FL HG A L M ++I +++ + K G V AR + D MS +N+VS
Sbjct: 14 AKIKAFL-HGLSLHAAALKTGM-LSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVS 71
Query: 208 WTVMITGYVKNERFCEARELFYRM---PD-----------------------YDKNV--- 238
W+ +I+GY + + A LF +M P+ + +++
Sbjct: 72 WSAIISGYDQTGQPLLALNLFSQMRIVPNEYVFASVISACASLTALSQGLQVHAQSLKLG 131
Query: 239 -----FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
FV A+I+ + K G+ +A L+ + + VS+NA+IAG+ +N E+ + F
Sbjct: 132 CVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFK 191
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + PD T + C++ G Q H +I+ E + + N +ITMYS+
Sbjct: 192 VMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFN 251
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL-IFFSQMGLNGFDPDGITFLSLL 412
I ++E F I +L+SWNT++ A +E+AL +F + + PD TF +L
Sbjct: 252 LIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVL 311
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHY------TCLVDILSRAGQLEKAWQITQG 466
+AC + +++G + + Y LV++ ++ G ++ ++ + +
Sbjct: 312 AACAGLASIRHGK-------QIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRR 364
Query: 467 MPFEADTGVWGSLLAA 482
+ + W +++AA
Sbjct: 365 TS-DRNLVSWNTIIAA 379
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 204/489 (41%), Gaps = 75/489 (15%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
++L FV+NA IS + G + A + + M+ + +++NA+I G+ +N ++
Sbjct: 128 LKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGI 187
Query: 102 NLFQSMPVKNIV----SWNCMIAGCIDNDRIDDAFDYFQAMP----------ERNTATYN 147
F+ M K +++ ++ C D D+++ M E + N
Sbjct: 188 EAFKVMRQKGFAPDRFTFSGLLGICTSYD------DFWRGMQLHCQMIKLNLEDSAFIGN 241
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG--FMKKGE---------VDKARAL 196
+I+ + K +EEA ++F + +++IS+ ++ F K E +D
Sbjct: 242 VIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVK 301
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
D +F V++ G + R Y ++V V A++ + K G ++N
Sbjct: 302 PDDFTFAGVLA---ACAGLASIRHGKQIHGHLIRTRQY-QDVGVSNALVNMYAKCGSIKN 357
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
+ +F R ++ VS+N +IA + +G+ AL F M + + PD T V + TAC+
Sbjct: 358 SYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNH 417
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L+ EG+ V N E + PN+ ++ +
Sbjct: 418 AGLVEEGQ-----VYFNSMEEAYGI-------------------------FPNIEHFSCL 447
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I + G ++A + ++ G DP I SLLSAC G + L ++K+
Sbjct: 448 IDLLGRAGRLQEAEEYMEKLPF-GHDP--IILGSLLSACRLHGDMVIGEHLATQLLKLQP 504
Query: 437 IIPSSEHYTCLVDILSRA---GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+ S Y L ++ + G + +AW++ + + + G SL+ + +G+
Sbjct: 505 VTTSP--YVLLSNLYASDEMWGGVAEAWKMLKYSGLKKEPG--HSLIDVMGMFEKFTMGD 560
Query: 494 LAAKKMREL 502
L+ ++ E+
Sbjct: 561 LSHSRIEEI 569
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
S+ C+ ++ G H ++ G +++ V N VI +YS+CG ++ + F ++
Sbjct: 8 SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR 67
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
NLVSW+ II+ + Q G AL FSQM + P+ F S++SAC +++ + +
Sbjct: 68 NLVSWSAIISGYDQTGQPLLALNLFSQMRIV---PNEYVFASVISACASLTALSQGLQVH 124
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
+K+ G + S L+ + + G A + M E + + +L+A V N
Sbjct: 125 AQSLKL-GCVSVSFVSNALISMYMKCGLCTDALLVHNVMS-EPNAVSYNALIAGFVENQQ 182
Query: 489 VELGELAAKKMRE 501
E G A K MR+
Sbjct: 183 PEKGIEAFKVMRQ 195
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LIR Q V V+NA ++ ++ G I + +F + + +++++WN II + +G +
Sbjct: 330 LIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARA 389
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
F+ M I V++ ++ C +++ YF +M E N ++ +I
Sbjct: 390 LEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLID 449
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ GRL+EA E++P
Sbjct: 450 LLGRAGRLQEAEEYMEKLP 468
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 285/549 (51%), Gaps = 48/549 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
+V +++ Y + G + +++ +F MP +N SW+ M+AG ++AFD F+ M
Sbjct: 46 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 105
Query: 140 ERN----------------------------------------TATYNAMISGFLKHGRL 159
E + N++++ + K G +
Sbjct: 106 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 165
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
A +FE RN I+++AM+ G+ + GE D A ++ M G +
Sbjct: 166 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 225
Query: 220 RFC-------EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+A L ++ ++ ++V +A++ + K G + +A+ F+++ D V +
Sbjct: 226 SDLGALAVGKQAHGLMVKL-GFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLW 284
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
AM++G+ QNG EEAL L++ M K + P +T+ S AC+ + L G+Q H +++
Sbjct: 285 TAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK 344
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
G V +A+ TMYS+CG + D FR+I ++++WN+II+ F+Q+G AL
Sbjct: 345 YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDL 404
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M + G PD ITF+++L AC H G V+ + F LM K YG+ P +HY C+VDILS
Sbjct: 405 FEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILS 464
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG L++A + + + T +W +L AC + ++G A +++ EL +S+ Y++
Sbjct: 465 RAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYIL 524
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
LSN+YA+ W DV RVR LM+ +GV K SW+E+ ++VH F+ G+ HP + I+ +
Sbjct: 525 LSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQ 584
Query: 573 LKRASVQMK 581
L+R + MK
Sbjct: 585 LRRLAKHMK 593
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 154/296 (52%), Gaps = 8/296 (2%)
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
++P NV+V T+++ +CK+G++ +AR +F+ + ++ S++ M+AGYA +EEA
Sbjct: 39 KIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAF 98
Query: 290 RLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
LF M++ + + +V +A S L G Q H L++++G VSV N+++TM
Sbjct: 99 DLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTM 158
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y++ G + + F N ++W+ +I +AQ+G + A+ FSQM GF P TF
Sbjct: 159 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 218
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+ +L+A G + LMVK+ G + LVD+ ++ G + A + +
Sbjct: 219 VGVLNASSDLGALAVGKQAHGLMVKL-GFEVQIYVKSALVDMYAKCGCIADAKEGFDQL- 276
Query: 469 FEADTGVWGSLLAACVINLNVELG-ELAAKKMRE-LDPQNSAVYVMLSNLYAAAGM 522
+E D +W ++++ V N E L A+ +E + P S + S L A AG+
Sbjct: 277 YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTI---ASGLRACAGI 329
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 156/324 (48%), Gaps = 23/324 (7%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
+V V N+ ++ ++AG + AA +F+ ++ ITW+A+ITGY QNG + ++F M
Sbjct: 148 FVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMH 207
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLE 160
G ++ A + E +A++ + K G +
Sbjct: 208 AAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIA 267
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV-SWTVMITGYVKNE 219
+A F+Q+ +++ +TAM+ G ++ GE ++A L M + ++ S + + +G
Sbjct: 268 DAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGL---- 323
Query: 220 RFC-------EARELFYRMPDYDKNVF--VVTAMITGFCKVGMLENARLLFERIQPKDCV 270
R C ++L ++ Y + V +A+ T + K G LE+ +F RI +D +
Sbjct: 324 RACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVI 383
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++N++I+G++QNG AL LF M PD+ T +++ ACS + L++ G + L+
Sbjct: 384 AWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLM 443
Query: 331 IRN-GFEANVSVCNAVITMYSRCG 353
++ G + ++ + SR G
Sbjct: 444 TKDYGLTPRLDHYACMVDILSRAG 467
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L ++V +A + ++ G I+ A++ FDQ+ D++ W A+++G+ QNG +E+
Sbjct: 241 MVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEA 300
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER--------NTATYNAMISG 152
L+ M + I+ IA + A + + + + +A+ +
Sbjct: 301 LTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTM 360
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
+ K G LE+ +F ++P R+VI++ +++ GF + G + A L + M + +
Sbjct: 361 YSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTI 414
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V +A + S+ G + +F ++ +DVI WN+II+G+ QNG + +LF+ M ++
Sbjct: 353 VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEG 412
Query: 112 IVSWNC----MIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
+ N ++ C +D ++YF M + T Y M+ + G L+EA
Sbjct: 413 TIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA 472
Query: 163 TRLFEQM 169
E +
Sbjct: 473 KDFIESI 479
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 278/529 (52%), Gaps = 64/529 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV A I S + AR++FD +V+TWN +++GY + ++SK LF M
Sbjct: 142 LFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEK 201
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ + N+ T M+S K LE +++ +
Sbjct: 202 RGV---------------------------SPNSVTLVLMLSACSKLKDLEGGKHIYKYI 234
Query: 170 P----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
RN+I ++D F GE+D+A+++ D M ++V+SWT
Sbjct: 235 NGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWT---------------- 278
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+++TGF +G ++ AR F++I +D VS+ AMI GY +
Sbjct: 279 -----------------SIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRF 321
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EAL LF M +++PD+ T+VS+ TAC+ L L G + +N + + V NA+
Sbjct: 322 IEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNAL 381
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I MY +CG + ++ F+++H + +W +I A +GH E+AL FS M PD
Sbjct: 382 IDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDE 441
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
IT++ +L AC HAG V + F M +GI P+ HY C+VD+L RAG+LE+A ++
Sbjct: 442 ITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIV 501
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
MP + ++ VWGSLL AC ++ NV+L E+AAK++ EL+P+N AVYV+L N+YAA W +
Sbjct: 502 NMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWEN 561
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
+ +VR LM E+G+ K S +E+ V+ F+ GD SHP +I+ +L+
Sbjct: 562 LRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLE 610
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 118/249 (47%), Gaps = 21/249 (8%)
Query: 245 ITGFC---KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
+ FC + G + AR +F+ I +N MI GY++ + + ++ M+ +++
Sbjct: 45 VIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIK 104
Query: 302 PDDAT---LVSVFTACSALQ----LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
PD T L+ FT ALQ LLN +++GF++N+ V A I M+S C
Sbjct: 105 PDRFTFPFLLKGFTRNMALQYGKVLLNHA-------VKHGFDSNLFVQKAFIHMFSLCRL 157
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ + F + +V+WN +++ + + ++K+ + F +M G P+ +T + +LSA
Sbjct: 158 VDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSA 217
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDILSRAGQLEKAWQITQGMPFEADT 473
C + +++ + GI+ + L+D+ + G++++A + M D
Sbjct: 218 CSKLKDLEGGKHIYKYING--GIVERNLILENVLIDMFAACGEMDEAQSVFDNMK-NRDV 274
Query: 474 GVWGSLLAA 482
W S++
Sbjct: 275 ISWTSIVTG 283
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 194/671 (28%), Positives = 320/671 (47%), Gaps = 128/671 (19%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV + A S + AAR +FDQ + NA++ GY Q+G +E+ LF M +
Sbjct: 65 FVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSR 124
Query: 111 NIVSWNC---------------------------------------MIAGCIDNDRIDDA 131
N+ +C MI+ + +I +A
Sbjct: 125 NLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEA 184
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PR-------------- 171
F MP ++ +N++I G+++ G + A +LF +M P
Sbjct: 185 QRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGI 244
Query: 172 -------------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+++ T+ +D + K G+++ AR + M +N+VSW MI
Sbjct: 245 GNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMI 304
Query: 213 TGYVKNERFCEARELFYRM------------------------------------PDYDK 236
+G V+N E+ +LF+R+ ++
Sbjct: 305 SGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFES 364
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N+ + TA++ + K G L+ A +F R++ ++ +++ AM+ G AQNG AE+ALRLF+ M
Sbjct: 365 NLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQ 424
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ + + T VS+ +C+ L L GR H + R GF ++ A++ MY++CG I
Sbjct: 425 EEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKIN 484
Query: 357 DSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+E F S ++V WN++I + HGH +A+ + +M G P+ TFLSLLSAC
Sbjct: 485 LAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSAC 544
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
H+ V + + LF M + + I P +HY CLVD+LSRAG+ E+A + + MPF+ T V
Sbjct: 545 SHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAV 604
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
+LL+ C + N+ LG + K+ LD N +Y+MLSN+YA A W V +R LM+
Sbjct: 605 LEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRN 664
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH--LELKRASVQ-----------MKS 582
+G+ K YS +E GN VH F GD SHP ++I+ LE R++V+ ++
Sbjct: 665 RGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRD 724
Query: 583 VDDFVEIATSW 593
VD+ +++ W
Sbjct: 725 VDEEMKVRMLW 735
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 147/296 (49%), Gaps = 30/296 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
+ V + + S+ G I +AR +F +M T+++++WNA+I+G +NG + ES +LF +
Sbjct: 266 ILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVR 325
Query: 108 -----PVKNIVSWNCMIAGCIDNDRIDD-------AFDYFQAMPERNTATYNAMISGFLK 155
+ IVS ++ GC + A F E N A++ + K
Sbjct: 326 SSGGFDLTTIVS---LLQGCSQTASLATGKILHGCAIRSF----ESNLILSTAIVDLYSK 378
Query: 156 HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
G L++AT +F +M RNVI++TAML G + G + A L M + + + +V
Sbjct: 379 CGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSL 438
Query: 216 VKN-------ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ-PK 267
V + +R +R+ + ++ +TA++ + K G + A +F K
Sbjct: 439 VHSCAHLGSLKRGRSIHGHLFRL-GFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISK 497
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
D V +N+MI GY +G +A+ ++ MI+ ++P+ T +S+ +ACS +L+ +G
Sbjct: 498 DVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQG 553
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 2/161 (1%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+ +H +I N + V ++ YS + + F Q P + N ++ + Q
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G Y + L F M + D + L AC + M++ V+ G+ +
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVE-KGMEKNRFV 167
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+ ++ L + G++ +A ++ GMP D W S++ V
Sbjct: 168 GSSMISFLVKFGKIGEAQRVFDGMP-NKDVVCWNSIIGGYV 207
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 263/481 (54%), Gaps = 39/481 (8%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E + + ++IS ++++ RLE+A ++F++ R+V+SYTA++ G+ +G ++ AR + D
Sbjct: 95 ELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDE 154
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD-------------------- 233
+ K+VVSW MI+GYV+ + EA ELF M PD
Sbjct: 155 IPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELG 214
Query: 234 -----------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+ N+ +V A+I + K G +E A LF + KD +S+N +I GY
Sbjct: 215 RQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHL 274
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR--NGFEANVS 340
+ +EAL LF M++ P+D T++S+ AC+ L ++ GR HV + + G S
Sbjct: 275 NLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASS 334
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
+ ++I MYS+CG I + F + +L +WN +I FA HG A FS+M N
Sbjct: 335 LRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNE 394
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
PD ITF+ LLSAC HAG ++ +F M Y I P EHY C++D+L +G ++A
Sbjct: 395 IKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEA 454
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
++ M E D +W SLL AC ++ NVELGE A+ + +++P N YV+LSN+YA A
Sbjct: 455 EEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATA 514
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
G W +V R+R L+ ++G+ K S IEI + VH F+ GD HP +I+ L+ V +
Sbjct: 515 GRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 574
Query: 581 K 581
+
Sbjct: 575 Q 575
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 238/537 (44%), Gaps = 91/537 (16%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ + IS + ++ A ++FD+ + +DV+++ A++TGY G+++ ++N+F +PV
Sbjct: 98 LYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPV 157
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
K++VSWN MI+G ++ +A + F+ M + N +T +IS + G +E ++
Sbjct: 158 KDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQV 217
Query: 166 FEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ A++D + K GE++ A L +S+K+V+SW ++I GY +
Sbjct: 218 HSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLY 277
Query: 222 CEARELFYRM------PD--------------------------YDKNVFVV-------T 242
EA LF M P+ DK + V T
Sbjct: 278 KEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 337
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A +F + K ++NAMI G+A +G A A +FS M K +++P
Sbjct: 338 SLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKP 397
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD T V + +ACS +L+ GR I N +
Sbjct: 398 DDITFVGLLSACSHAGMLDLGRH-----IFRSMTHNYKI--------------------- 431
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+P L + +I G +++A S M + +PDG+ + SLL AC G V
Sbjct: 432 ----TPKLEHYGCMIDLLGHSGLFKEAEEMISTMTM---EPDGVIWCSLLKACKMHGNVE 484
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + K+ P S Y L +I + AG+ + +I + + V G
Sbjct: 485 LGEKFAQNLFKIEPNNPGS--YVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPG----C 538
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSN---LYAAAGMWRDVTRVRLLMKEQ 536
I ++ + E + P+N +Y ML L AG D + V M+E+
Sbjct: 539 SSIEIDSVVHEFIIGD--KFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEE 593
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 160/323 (49%), Gaps = 36/323 (11%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE------- 286
Y+ +++V T++I+ + + LE+A +F+R +D VS+ A++ GYA G E
Sbjct: 94 YELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFD 153
Query: 287 ------------------------EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
EAL LF M+K +++PD++T+V+V +A + +
Sbjct: 154 EIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIEL 213
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GRQ H + +GF +N+ + NA+I YS+CG + + F + +++SWN +I +
Sbjct: 214 GRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTH 273
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-VYGIIPSS 441
Y++AL+ F +M +G P+ +T LS+L AC H G ++ + + K + G+ +S
Sbjct: 274 LNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNAS 333
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN--LNVELGELAAKKM 499
T L+D+ S+ G +E A Q+ M W +++ ++ N + +
Sbjct: 334 SLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRK 392
Query: 500 RELDPQNSAVYVMLSNLYAAAGM 522
E+ P + +V L + + AGM
Sbjct: 393 NEIKPDD-ITFVGLLSACSHAGM 414
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 38/296 (12%)
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+FE IQ + + +N M G+A + AL+L+ MI + + P+ T + +C+ L+
Sbjct: 19 VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMY------------------------------ 349
EG Q H V++ G+E ++ V ++I+MY
Sbjct: 79 SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138
Query: 350 --SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
SR G I + F +I ++VSWN +I+ + + G+Y++AL F +M PD T
Sbjct: 139 YASR-GYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDEST 197
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
++++SA +G + + + +G + + L+D S+ G++E A + G+
Sbjct: 198 MVTVISASARSGSIELGRQVHSWIAD-HGFGSNLKIVNALIDFYSKCGEMETACGLFLGL 256
Query: 468 PFEADTGVWGSLLAACV-INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
++ D W L+ +NL E L + +R + N MLS L+A A +
Sbjct: 257 SYK-DVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDV--TMLSILHACAHL 309
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 290/565 (51%), Gaps = 49/565 (8%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---------------- 107
G AR+LFD++ ++ WN +I GY + F Q +L+ M
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 108 ------------------PVKNIVSWNCMIAGCIDN-----DRIDDAFDYFQAMPERNTA 144
+K+ + +N + + ++D A F P+ +
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 185
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA----MLDGFMKKGEVDKARALSDYM 200
T+N +IS + K G+ EE+ RLF M + V+ T +L K ++ + + Y+
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245
Query: 201 S----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
N+V MI Y A +F M + D + T +++GF +G ++
Sbjct: 246 KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRD--IISWTTIVSGFTNLGEIDV 303
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR F+++ KD VS+ AMI GY ++ +EAL LF M +++PD+ T+VSV TAC+
Sbjct: 304 ARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAH 363
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L G + RN + ++ V NA+I MY +CG + +E FR++ + +W +
Sbjct: 364 LGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAM 423
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I A +GH EKAL FS M PD IT++ +LSAC H G V++ F M +G
Sbjct: 424 IVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHG 483
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
I P+ HY CLVD+L+RAG+L++A+++ + MP +A++ VWG+LLA C + ++ E+
Sbjct: 484 IEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVV 543
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
K++ EL+P N AVYV+L N+YAA W D+ +R +M ++G+ K S IE+ +VH F
Sbjct: 544 KQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEF 603
Query: 557 LGGDMSHPCIDKIHLELKRASVQMK 581
+ GD SHP I +L + + +K
Sbjct: 604 VAGDRSHPQTKNIDAKLDKMTQDLK 628
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 209/434 (48%), Gaps = 51/434 (11%)
Query: 48 QY-VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
QY VFV+ A + G++ AR +FD DVITWN II+ Y + G +ES+ LF
Sbjct: 150 QYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLV 209
Query: 107 MPVKNI----VSWNCMIAGC--IDNDRIDDAFDYF--QAMPERNTATYNAMISGFLKHGR 158
M K + V+ +++ C + + R + E N NAMI + G
Sbjct: 210 MEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGE 269
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
++ A +F M R++IS+T ++ GF GE+D AR D M K+ VSWT MI GY+++
Sbjct: 270 MDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS 329
Query: 219 ERFCEARELFYRM------PD--------------------------YDKN-----VFVV 241
RF EA ELF M PD D+N +FV
Sbjct: 330 NRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR 389
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
A+I + K G ++ A +F + +D ++ AMI G A NG E+AL +FS M+K +
Sbjct: 390 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 449
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHV-LVIRNGFEANVSVCNAVITMYSRCGGILDS-E 359
PD+ T + V +AC+ L+++GR+ + + ++G E N++ ++ + +R G + ++ E
Sbjct: 450 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 509
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD-GITFLSLLSACGHA 418
+ N + W ++A + + A + Q + +PD G ++ L +
Sbjct: 510 VIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ--ILELEPDNGAVYVLLCNIYAAC 567
Query: 419 GKVNESMDLFELMV 432
+ N+ +L ++M+
Sbjct: 568 KRWNDLRELRQMMM 581
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 198/448 (44%), Gaps = 68/448 (15%)
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTV 210
++G + A RLF+++P N+ + M+ G+ + +L M + V ++
Sbjct: 64 EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPF 123
Query: 211 MITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+ G+ ++ R+L + + NVFV TA++ + G L+ AR +F+ D
Sbjct: 124 LFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKAD 183
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
+++N +I+ Y + G EE+ RLF M + P TLV V +ACS L+ L G++ H
Sbjct: 184 VITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 243
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELA-FRQIHSPNLVSWNTIIAAFAQHGH-- 385
V E+N+ + NA+I MY+ CG +DS L FR +++ +++SW TI++ F G
Sbjct: 244 YVKNCKVESNLVLENAMIDMYADCGE-MDSALGIFRSMNNRDIISWTTIVSGFTNLGEID 302
Query: 386 -----------------------------YEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+++AL F M PD T +S+L+AC
Sbjct: 303 VARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACA 362
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
H G + E + + I L+D+ + G ++KA I + M + D W
Sbjct: 363 HLGAL-ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTW 420
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
+++ +N + E + LD M SN+ A+ + ++T +
Sbjct: 421 TAMIVGLAVNGHGE---------KALD--------MFSNMLKASILPDEITYI------- 456
Query: 537 GVTKQCAYS-WIEIGNKVHYFLGGDMSH 563
GV C ++ ++ G K YFL H
Sbjct: 457 GVLSACTHTGLVDKGRK--YFLRMTSQH 482
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 266/469 (56%), Gaps = 38/469 (8%)
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
G ++ GR+ A + +++ +++ + K G +D AR + D M K++V+WT +
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160
Query: 212 ITGYVKNERFCEARELFYRM------PD-------------------------------Y 234
I G+ +N R +A LF +M P+ Y
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY 220
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+V+V +A++ + + G ++ A+L F+ + K VS+NA+I+G+A+ G E AL L
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + + QP T SV +AC+++ L +G+ H +I++G + + N ++ MY++ G
Sbjct: 281 MQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGS 340
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
I D++ F ++ P++VSWNT++ AQHG ++ L F QM G +P+ I+FL +L+A
Sbjct: 341 IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H+G ++E + FELM K Y + P HY VD+L R G L++A + + MP E
Sbjct: 401 CSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAA 459
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VWG+LL AC ++ N+ELG AA++ ELDP +S ++LSN+YA+AG WRDV +VR +MK
Sbjct: 460 VWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMK 519
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
E GV KQ A SW+EI N VH F+ D +HP I +I + + S ++K +
Sbjct: 520 ESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEI 568
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 170/379 (44%), Gaps = 53/379 (13%)
Query: 61 SRAGKISAAR----QLFD-QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
+R GK+ R L D ++ N I+ Y + G L +++ +F MP K++V+W
Sbjct: 98 TRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTW 157
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK-----HGRLEEATRL----F 166
+IAG N+R DA F M + +S LK HG L+ T+L
Sbjct: 158 TALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG-LDPGTQLHAFCL 216
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ + +V +A++D + + G +D A+ D M K+ VSW +I+G+ + A
Sbjct: 217 KYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALH 276
Query: 227 LFYRM--PDYDKNVFVVTAMITG-----------------------------------FC 249
L ++M ++ F +++++ +
Sbjct: 277 LLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYA 336
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K G +++A+ +F+R+ D VS+N M+ G AQ+G+ +E L F M+++ ++P++ + +
Sbjct: 337 KAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLC 396
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SP 368
V TACS LL+EG L+ + E +V + + R G + +E R++ P
Sbjct: 397 VLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEP 456
Query: 369 NLVSWNTIIAAFAQHGHYE 387
W ++ A H + E
Sbjct: 457 TAAVWGALLGACRMHKNME 475
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 136/329 (41%), Gaps = 74/329 (22%)
Query: 15 ILFPPILRILSTPD---------SCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISAL 60
+LFP +LR+ P+ + G+ + F +Y V+V +A +
Sbjct: 175 LLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMY 234
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA 120
+R G + AA+ FD M TK ++WNA+I+G+ + G + + +L M KN
Sbjct: 235 ARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN--------- 285
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR--NVISY- 177
FQ TY++++S G LE+ + M + +I++
Sbjct: 286 --------------FQP----THFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFI 327
Query: 178 -TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+LD + K G +D A+ + D + +VVSW M+TG ++ E + F +M
Sbjct: 328 GNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQM----- 382
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
++G I+P + +SF ++ + +G+ +E L F M
Sbjct: 383 ------------LRIG-----------IEPNE-ISFLCVLTACSHSGLLDEGLYYFELMK 418
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQ 325
K ++PD V+ + LL+ +
Sbjct: 419 KYKVEPDVPHYVTFVDLLGRVGLLDRAER 447
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
F+ N + ++AG I A+++FD++ DV++WN ++TG Q+G +E+ + F+ M
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEE 161
N +S+ C++ C + +D+ YF+ M E + Y + + G L+
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDR 444
Query: 162 ATRLFEQMP 170
A R +MP
Sbjct: 445 AERFIREMP 453
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/463 (35%), Positives = 259/463 (55%), Gaps = 7/463 (1%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALS 197
+T ++ + G++ A RLF+ MP+RNV + ++ + ++G + A R +
Sbjct: 96 DTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMV 155
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLE 255
++ + ++ +++ RE+ R+ + ++VFV ++ + K G ++
Sbjct: 156 EHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVD 215
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+AR +F+ I +D V +N+MIA Y QNG EAL L M + P ATLVS +A +
Sbjct: 216 DARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAA 275
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L GR+ H R GF + +++ MY++ G + + + F Q+ LVSWN
Sbjct: 276 DAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNA 335
Query: 376 IIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I + HGH ++AL F++M G PD ITF+ +LSAC H G V E+ + F LMV
Sbjct: 336 MICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNA 395
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
Y I P+ +HYTC++D+L G+ E+A+ + +GM E D+G+WG+LL C I+ NVELGEL
Sbjct: 396 YSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGEL 455
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
A +K+ EL+P+++ YV LSN+YA +G W RVR LM +G+ K A SWIE+ K H
Sbjct: 456 ALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTH 515
Query: 555 YFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSWSSFD 597
FL GD SHP D+I+ EL+R M +I + + D
Sbjct: 516 GFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDIIPVFHNVD 558
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 216/505 (42%), Gaps = 100/505 (19%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKI-SALSRAGKISAARQLFDQ 75
PP ++P P S+N RL S+ + + ++ I + +G + A RQL +
Sbjct: 36 LPPNTGFAASP------PPPSTN--PRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGR 87
Query: 76 MTTK----DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA 131
+ D + ++ Y G + ++ LF MP +N+ WN +I + A
Sbjct: 88 LLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAA 147
Query: 132 FDYFQAMPERNTA----TYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDG 183
++ M E TY ++ LE + +++ ++V ++D
Sbjct: 148 VRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDM 207
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA------------------- 224
+ K G VD ARA+ D ++ ++ V W MI Y +N R EA
Sbjct: 208 YAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATL 267
Query: 225 ----------------REL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
REL F + + T+++ + K G ++ AR+LFE++
Sbjct: 268 VSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMK 327
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ--PDDATLVSVFTACSALQLLNEGR 324
++ VS+NAMI GY +G A+EAL LF+ M K D Q PD+ T V V +AC+ ++ E +
Sbjct: 328 RELVSWNAMICGYGMHGHADEALALFNKM-KGDAQVTPDNITFVGVLSACNHGGMVEEAK 386
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
+ L++ N + P + + +I G
Sbjct: 387 EFFYLMV-NAYSIK-----------------------------PTVQHYTCVIDVLGHTG 416
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIPS-SE 442
+E+A M + +PD + +LL+ C K++++++L EL + K+ + P +
Sbjct: 417 RFEEAYDLIKGMSI---EPDSGIWGALLNGC----KIHKNVELGELALQKLIELEPEDAG 469
Query: 443 HYTCLVDILSRAGQLEKAWQITQGM 467
+Y L +I +++G+ EKA ++ + M
Sbjct: 470 NYVHLSNIYAQSGKWEKAARVRKLM 494
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
S+ +C A L GRQ H ++ +G + + ++ +Y+ CG + + F +
Sbjct: 66 TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N+ WN +I A+A+ G E A+ + M +G +PD T+ +L AC + ++
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREV 185
Query: 428 FELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ +V G + + C +VD+ ++ G ++ A + G+ D VW S++AA
Sbjct: 186 HQ---RVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVR-DAVVWNSMIAA 238
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 264/465 (56%), Gaps = 12/465 (2%)
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
N +D A F+ MP ++ N +I+G+ K G +EEA RLF+ MPRR S+ +M+ +
Sbjct: 222 NGDMDSALMAFKEMPVKDPIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACY 281
Query: 185 MKKGEVDKARALSDYM----SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD-KNVF 239
GE +A L D M + N ++ T + + K R + + D +NV
Sbjct: 282 AHGGEFREALTLFDQMLREGASPNAITITTVFSICAKTGDLDTGRRARAWIREEDLQNVI 341
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V TA++ + K ++ AR F+R+ +D V+++ MIAGY+QNG E+L LF M +
Sbjct: 342 VHTALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATN 401
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+P++ TLV V +AC+ L G Q + + +A+I MY++CG + +
Sbjct: 402 CKPNEVTLVGVLSACAQLGSDELGEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARAR 461
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F ++ +V+WN++I A +G E A+ + +M +G P+ +TF++LL+AC HAG
Sbjct: 462 SVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAG 521
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
V++ + FE M K + P EH C+VD+L ++G+L +A++ M E + +W +L
Sbjct: 522 LVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTL 581
Query: 480 LAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
L+AC + +VEL +LAA K+ L+P NS++YV+LSN+YA AG+W DV +R LM+ + +
Sbjct: 582 LSACRAHADVELAKLAAGKLVALEPNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQ 641
Query: 540 KQCAYSWIEIGNKVHYFLGGDMSHP-------CIDKIHLELKRAS 577
K AYSWIE+ +VH FL D HP +D + L+L+R S
Sbjct: 642 KLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQLERTS 686
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 205/439 (46%), Gaps = 72/439 (16%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A + ++ G + +A F +M KD I N +ITGY ++G ++E++ LF SMP
Sbjct: 209 VFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMNCLITGYSKSGDVEEARRLFDSMPR 268
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI----------SGFLKHGRL 159
+ SWN MIA +A F M R A+ NA+ +G L GR
Sbjct: 269 RTSASWNSMIACYAHGGEFREALTLFDQM-LREGASPNAITITTVFSICAKTGDLDTGRR 327
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
A E + +NVI +TA+++ ++K +D+AR D M ++VV+W+ MI GY +N
Sbjct: 328 ARAWIREEDL--QNVIVHTALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNG 385
Query: 220 RFCEARELFYRM------PDYDKNVFVV-------------------------------T 242
R E+ ELF RM P+ V V+ +
Sbjct: 386 RPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYIESQTLPLTSYLGS 445
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
A+I + K G + AR +F R++ K V++N+MI G A NG AE+A+ L+ M+ +QP
Sbjct: 446 ALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQP 505
Query: 303 DDATLVSVFTACSALQLLNEG--------RQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
++ T V++ TAC+ L+++G ++ HV V C ++ + + G
Sbjct: 506 NEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHV-------SPQVEHCACIVDLLCKSGR 558
Query: 355 ILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ ++ + PN V W+T+++A H E A + + L +P+ + LLS
Sbjct: 559 LWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGK--LVALEPNNSSIYVLLS 616
Query: 414 ----ACGHAGKVNESMDLF 428
G G V E DL
Sbjct: 617 NIYADAGLWGDVREIRDLM 635
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 33/282 (11%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR Q V V+ A + + I AR FD+M +DV+ W+ +I GY QNG ES
Sbjct: 332 IREEDLQNVIVHTALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESL 391
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
LF+ M N + G + A + + I +++ L
Sbjct: 392 ELFERMKATNCKPNEVTLVGVL------------SACAQLGSDELGEQIGNYIESQTLPL 439
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ L +A++D + K G V +AR++ + M K VV+W MI G N
Sbjct: 440 TSYLG-----------SALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFA 488
Query: 222 CEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA----- 274
+A L+ +M N A++T G+++ FE ++ K VS
Sbjct: 489 EDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCAC 548
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
++ ++G EA + + M+++P+ ++ +AC A
Sbjct: 549 IVDLLCKSGRLWEAYKF---ICDMEVEPNAVIWSTLLSACRA 587
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR LF+ + A ++G ++ + +E + + S + + + V +C+
Sbjct: 127 ARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGCIPLVLKSCAQ 186
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
+G Q+H + G +V V A++ Y++ G + + +AF+++ + + N +
Sbjct: 187 SAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMNCL 246
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I +++ G E+A F M ++ S+++ H G+ E++ LF+ M++ G
Sbjct: 247 ITGYSKSGDVEEARRLFDSMPRR----TSASWNSMIACYAHGGEFREALTLFDQMLR-EG 301
Query: 437 IIPSSEHYTCLVDILSRAGQLE-----KAW 461
P++ T + I ++ G L+ +AW
Sbjct: 302 ASPNAITITTVFSICAKTGDLDTGRRARAW 331
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 181/647 (27%), Positives = 317/647 (48%), Gaps = 115/647 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V +A + S+ K+ A ++F +M ++++ W+A+I GY QN E LF+ M
Sbjct: 173 VVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLK 232
Query: 108 --------------------------------PVKNIVSWNCMIAGCIDN-----DRIDD 130
+K+ +++ +I + +R+ D
Sbjct: 233 VGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFD 292
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTA------- 179
A+ F +P +YNA+I G+ + + +A +F+ + R N+ IS +
Sbjct: 293 AWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSV 352
Query: 180 ----------------------------MLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+LD + K G + +A + + M ++ VSW +
Sbjct: 353 IKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAI 412
Query: 212 ITGYVKNERFCEARELFYRM------PD------------------YDKNV--------- 238
I + +NE + LF M PD Y +
Sbjct: 413 IAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGM 472
Query: 239 ----FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
FV +A++ + K GML A + R++ K VS+N++I+G++ +E A R FS
Sbjct: 473 GLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQ 532
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M++M + PD+ T +V C+ + + G+Q H +++ ++V + + ++ MYS+CG
Sbjct: 533 MLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGN 592
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ DS L F + + V+W+ +I A+A HG EKA+ F +M L P+ F+S+L A
Sbjct: 593 MQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRA 652
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V++ + F+ M+ YG+ P EHY+C+VD+L R+GQ+ +A ++ + MPFEAD
Sbjct: 653 CAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDV 712
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+W +LL+ C + NVE+ E A + +LDPQ+S+ YV+L+N+YA GMW +V ++R +MK
Sbjct: 713 IWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMK 772
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+ K+ SWIE+ ++VH FL GD +HP ++I+ + +MK
Sbjct: 773 NCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMK 819
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 232/478 (48%), Gaps = 47/478 (9%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V N + ++ K++ A ++FD+M +DVI+WN +I GY G + +++LF SMP
Sbjct: 41 IYVANCLLQFYCKSSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPE 100
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMI---SGFLKHGRLEEA 162
+++VSWN +++ + N + + F M + AT+ ++ SG +G +
Sbjct: 101 RDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQV 160
Query: 163 TRLFEQMPRRN-VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
L QM N V++ +A++D + K ++D A + M +N+V W+ +I GYV+N+RF
Sbjct: 161 HCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRF 220
Query: 222 CEARELFYRM-------------------------------------PDYDKNVFVVTAM 244
E +LF M D+ + + TA
Sbjct: 221 IEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTAT 280
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
+ + K + +A +F + S+NA+I GYA+ +AL +F + + ++ D+
Sbjct: 281 LDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDE 340
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
+L TACS ++ EG Q H L ++ G N+ V N ++ MY +CG ++++ L F +
Sbjct: 341 ISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEE 400
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ + VSWN IIAA Q+ K L F M + +PD T+ S++ AC +N
Sbjct: 401 MERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYG 460
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ ++K G+ + LVD+ + G L +A +I + E T W S+++
Sbjct: 461 TEIHGRIIKS-GMGLDWFVGSALVDMYGKCGMLMEAEKIHARLE-EKTTVSWNSIISG 516
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 186/385 (48%), Gaps = 18/385 (4%)
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V I NC++ + +++ AF F MP+R+ ++N +I G+ G + A LF+
Sbjct: 38 VPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDS 97
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKA-------RALS---DYMSFKNVVSWTVMITGY-VK 217
MP R+V+S+ ++L ++ G K+ R+L DY +F ++ I Y +
Sbjct: 98 MPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLG 157
Query: 218 NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ C A ++ ++ +V +A++ + K L++A +F + ++ V ++A+IA
Sbjct: 158 LQVHCLAIQM-----GFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIA 212
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GY QN E L+LF M+K+ M +T SVF +C+ L G Q H +++ F
Sbjct: 213 GYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAY 272
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ + A + MY++C + D+ F + +P S+N II +A+ KAL F +
Sbjct: 273 DSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQ 332
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
N D I+ L+AC + E + L L VK G+ + ++D+ + G L
Sbjct: 333 RNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKC-GLGFNICVANTILDMYGKCGAL 391
Query: 458 EKAWQITQGMPFEADTGVWGSLLAA 482
+A I + M D W +++AA
Sbjct: 392 MEACLIFEEME-RRDAVSWNAIIAA 415
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 6 YFHQTYLKRILFPPILRILSTPDSCGNFTP-------HSSNCLIRLFSTQYVFVNNAKIS 58
YF Q L+ + P + D C N H+ ++L S V++ + +
Sbjct: 529 YFSQM-LEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSD--VYIASTLVD 585
Query: 59 ALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VS 114
S+ G + +R +F++ +D +TW+A+I Y +G +++ NLF+ M + N+
Sbjct: 586 MYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTI 645
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAM-----PERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ ++ C +D YFQ M + Y+ M+ + G++ EA +L E M
Sbjct: 646 FISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESM 705
Query: 170 P-RRNVISYTAMLDGFMKKGEVDKAR 194
P + + + +L +G V+ A
Sbjct: 706 PFEADDVIWRTLLSNCKMQGNVEVAE 731
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 39/215 (18%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T + CS L+ LN G+Q H +I GF + V N ++ Y + + + F ++
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+++SWNT+I +A G+ A F M + D +++ SLLS H G +S+
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMP----ERDVVSWNSLLSCYLHNGVNRKSI 123
Query: 426 DLFELMVKV--------YGIIPSS----EHY----------------------TCLVDIL 451
++F M + + +I + E Y + LVD+
Sbjct: 124 EIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
S+ +L+ A+++ + MP E + W +++A V N
Sbjct: 184 SKCKKLDDAFRVFREMP-ERNLVCWSAVIAGYVQN 217
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 281/548 (51%), Gaps = 48/548 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV N I Y++ +Q + LF M KN+VSW +IAGC+ N DA D F M
Sbjct: 276 DVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMA 335
Query: 140 ERN--------TATYNAMISGF-LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
T+ N+ S L+ GR A + + + + ++D + K +
Sbjct: 336 RMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVK-NGLIDMYAKCDSL 394
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------------------ 232
AR + + M+ ++VS+ MI GY + ++ CEA +LF M
Sbjct: 395 TDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVS 454
Query: 233 -------------------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ F +A+I + K + +ARL+FE IQ KD V +
Sbjct: 455 ASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWT 514
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AM +GY Q EE+L+L+ + ++P++ T +V TA S + L G+Q H VI+
Sbjct: 515 AMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKM 574
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GF+ + V N ++ MY++ G I ++ AF + + WN++IA +AQHG EKAL F
Sbjct: 575 GFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVF 634
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
M + G P+ +TF+ +LSAC H G ++ D F+ M + +GI P EHY C+V +L R
Sbjct: 635 EDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ-FGIEPGIEHYVCMVSLLGR 693
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
AG+L +A + + MP + VW SLL+AC ++ NVELG AA+ +P +S YV+L
Sbjct: 694 AGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLL 753
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SN++A+ GMW +V R+R M GV K+ SWIE+ N++H F+ D +H I L L
Sbjct: 754 SNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVL 813
Query: 574 KRASVQMK 581
+Q+K
Sbjct: 814 DNLLLQIK 821
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 228/525 (43%), Gaps = 72/525 (13%)
Query: 4 NSYFHQTYLKRILFPPILRILSTPDSCGNF--TPHSSNC-------LIRLFSTQYVFVNN 54
++ HQ RI PPI+ N +PH C ++ F +F+ N
Sbjct: 21 STLLHQFLEPRI--PPIIEQRKIGRELANLLQSPHIPCCKKIHSKIVVFGFHKHDIFLVN 78
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
+ A S+ ++ A +LFD M+ K+++TW+++++ Y + E+ LF V+ + S
Sbjct: 79 TLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLF----VQFMRS 134
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
N + +Y A R + + HG + + + ++V
Sbjct: 135 CN------------EKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYV------QDV 176
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--- 231
T+++D + K +D AR L D + K +WT +I GY K R + +LF +M
Sbjct: 177 YVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEG 236
Query: 232 ---PD---------------------------YDKNVFVVTAMITGFC----KVGMLENA 257
PD + + +M+ GF K ++
Sbjct: 237 HVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLG 296
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
R LF+R+ K+ VS+ +IAG QN +AL LF M +M PD SV +C +L
Sbjct: 297 RKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSL 356
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
L +GRQ H I+ + + V N +I MY++C + D+ F + + +LVS+N +I
Sbjct: 357 VALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMI 416
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
+++ +AL F +M L+ P + F+SLL + S + L++K YG+
Sbjct: 417 EGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIK-YGV 475
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ L+D+ S+ ++ A + + + + D VW ++ +
Sbjct: 476 SLDEFAGSALIDVYSKCSRVGDARLVFEEIQ-DKDIVVWTAMFSG 519
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 125/303 (41%), Gaps = 58/303 (19%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV- 109
F +A I S+ ++ AR +F+++ KD++ W A+ +GY Q +ES L++ + +
Sbjct: 480 FAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMS 539
Query: 110 ----------------KNIVSW-------NCMIAGCIDND---------------RIDDA 131
NI S N +I D+D I++A
Sbjct: 540 RLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEA 599
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKK 187
F + ++TA +N+MI+ + +HG E+A ++FE M + N +++ +L
Sbjct: 600 HKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHT 659
Query: 188 GEVDKARALSDYMS----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTA 243
G +D D MS + + M++ + + EA+E +MP K VV
Sbjct: 660 GLLDLGFDHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMP--IKQAAVVWR 717
Query: 244 MITGFCKV-GMLENARLLFE---RIQPKDCVSFNAMIAGYAQNGVAEEALRL-----FSG 294
+ C+V G +E E P D S+ + +A G+ RL SG
Sbjct: 718 SLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISG 777
Query: 295 MIK 297
++K
Sbjct: 778 VVK 780
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 178/513 (34%), Positives = 268/513 (52%), Gaps = 41/513 (7%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ NAII G L ++ LF V+++VSWN +I G + D+AFD + M
Sbjct: 189 DLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMG 248
Query: 140 ERNT----ATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVD 191
E N T ++S + L +L + + V A++D ++K ++
Sbjct: 249 ELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIE 308
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
A+ L + M+ K VVSWT M+ G+ K
Sbjct: 309 AAKILFENMTKKTVVSWT---------------------------------TMVIGYAKF 335
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G+LE+A LF + KD V +NA+I G+ Q ++EAL LF M + PD T+V+
Sbjct: 336 GLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCL 395
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
+ACS L L+ G H V ++ NV++ A++ MY++CG I + F ++ N +
Sbjct: 396 SACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSL 455
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+W II A HG A+ +FS+M G PD ITF+ +LSAC H G V++ D F M
Sbjct: 456 TWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQM 515
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
YGI P +HY+CLVD+L RAG LE+A ++ + MPFE D VWG+L I+ NV +
Sbjct: 516 TSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHM 575
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
GE AA K+ ELDP + +YV+L+N+Y A MW +VR +M+E+GV K S IE+
Sbjct: 576 GERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNG 635
Query: 552 KVHYFLGGDMSHPCIDKIHLELKRASVQMKSVD 584
V+ F+ D SHP +KI+ L R + Q++ ++
Sbjct: 636 LVYDFIIRDKSHPQSEKIYECLTRLTRQIEVIE 668
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 188/392 (47%), Gaps = 47/392 (11%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+L +FV+NA I L G++ AAR+LFD+ +D+++WN+II GY + G E+
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEA 240
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDN----DRIDDAFDYFQAMPER----NTATYNAMISG 152
+L+ M N++ + G + + + Q++ E NA++
Sbjct: 241 FDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDM 300
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
++K +E A LFE M ++ V+S+T M+ G+ K G ++ A L + M K+VV W +I
Sbjct: 301 YIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALI 360
Query: 213 TGYVKNERFCEARELFYRM------PD--------------------------YDK---- 236
G+V+ +R EA LF+ M PD DK
Sbjct: 361 GGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLT 420
Query: 237 -NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
NV + TA++ + K G ++ A +FE + ++ +++ A+I G A +G A+ FS M
Sbjct: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEM 480
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGG 354
I + + PD+ T + V +AC L+++GR + + + G + + ++ + R G
Sbjct: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGF 540
Query: 355 ILDSELAFRQI-HSPNLVSWNTIIAAFAQHGH 385
+ ++E R + P+ V W + HG+
Sbjct: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGN 572
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 152/334 (45%), Gaps = 70/334 (20%)
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRM-------PD----------------------- 233
NV SW + I GYV++E A L+ M PD
Sbjct: 118 NVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 234 --------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+D ++FV A+I G L AR LF+ +D VS+N++I GY + G+A
Sbjct: 178 LGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLA 237
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+EA L+ M ++++ PD+ T++ V +A + L+ L GR+ H + G V + NA+
Sbjct: 238 DEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANAL 297
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG-------- 397
+ MY +C I +++ F + +VSW T++ +A+ G E A+ F++M
Sbjct: 298 MDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWN 357
Query: 398 --LNGF---------------------DPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+ GF PD IT ++ LSAC G ++ + + + K
Sbjct: 358 ALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK- 416
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+ + + T LVD+ ++ G ++KA Q+ + MP
Sbjct: 417 HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMP 450
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 178/513 (34%), Positives = 268/513 (52%), Gaps = 41/513 (7%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ NAII G L ++ LF V+++VSWN +I G + D+AFD + M
Sbjct: 189 DLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMG 248
Query: 140 ERNT----ATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVD 191
E N T ++S + L +L + + V A++D ++K ++
Sbjct: 249 ELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIE 308
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
A+ L + M+ K VVSWT M+ G+ K
Sbjct: 309 AAKILFENMTKKTVVSWTT---------------------------------MVIGYAKF 335
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G+LE+A LF + KD V +NA+I G+ Q ++EAL LF M + PD T+V+
Sbjct: 336 GLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCL 395
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
+ACS L L+ G H V ++ NV++ A++ MY++CG I + F ++ N +
Sbjct: 396 SACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSL 455
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+W II A HG A+ +FS+M G PD ITF+ +LSAC H G V++ D F M
Sbjct: 456 TWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQM 515
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
YGI P +HY+CLVD+L RAG LE+A ++ + MPFE D VWG+L I+ NV +
Sbjct: 516 TSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHM 575
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
GE AA K+ ELDP + +YV+L+N+Y A MW +VR +M+E+GV K S IE+
Sbjct: 576 GERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNG 635
Query: 552 KVHYFLGGDMSHPCIDKIHLELKRASVQMKSVD 584
V+ F+ D SHP +KI+ L R + Q++ ++
Sbjct: 636 LVYDFIIRDKSHPQSEKIYECLTRLTRQIEVIE 668
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 188/392 (47%), Gaps = 47/392 (11%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+L +FV+NA I L G++ AAR+LFD+ +D+++WN+II GY + G E+
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEA 240
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDN----DRIDDAFDYFQAMPER----NTATYNAMISG 152
+L+ M N++ + G + + + Q++ E NA++
Sbjct: 241 FDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDM 300
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
++K +E A LFE M ++ V+S+T M+ G+ K G ++ A L + M K+VV W +I
Sbjct: 301 YIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALI 360
Query: 213 TGYVKNERFCEARELFYRM------PD--------------------------YDK---- 236
G+V+ +R EA LF+ M PD DK
Sbjct: 361 GGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLT 420
Query: 237 -NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
NV + TA++ + K G ++ A +FE + ++ +++ A+I G A +G A+ FS M
Sbjct: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEM 480
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGG 354
I + + PD+ T + V +AC L+++GR + + + G + + ++ + R G
Sbjct: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGF 540
Query: 355 ILDSELAFRQI-HSPNLVSWNTIIAAFAQHGH 385
+ ++E R + P+ V W + HG+
Sbjct: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGN 572
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 151/334 (45%), Gaps = 70/334 (20%)
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRM-------PD----------------------- 233
N SW + I GYV++E A L+ M PD
Sbjct: 118 NXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 234 --------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+D ++FV A+I G L AR LF+ +D VS+N++I GY + G+A
Sbjct: 178 LGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLA 237
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+EA L+ M ++++ PD+ T++ V +A + L+ L GR+ H + G V + NA+
Sbjct: 238 DEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANAL 297
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG-------- 397
+ MY +C I +++ F + +VSW T++ +A+ G E A+ F++M
Sbjct: 298 MDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWN 357
Query: 398 --LNGF---------------------DPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+ GF PD IT ++ LSAC G ++ + + + K
Sbjct: 358 ALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK- 416
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+ + + T LVD+ ++ G ++KA Q+ + MP
Sbjct: 417 HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMP 450
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 297/591 (50%), Gaps = 68/591 (11%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
YV + NA S S + Q+ Q DV A+I Y + G ++ + + F+ +
Sbjct: 108 YVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE 167
Query: 109 VKNIVSWNCMIAGCIDNDRIDDA-------------------FDYFQAMPERNTATYNAM 149
+++VSW MIA C+ +D+ A + F A + N +
Sbjct: 168 HRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKF 227
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+ G + G +E R+ + ++ F G + AR L + M ++VV+W
Sbjct: 228 VYGLVSSGVMESDVRVM-----------NSAVNMFGNAGLLGDARRLFEDMVDRDVVTWN 276
Query: 210 VMITGYVKNERFCEARELFYRMPD------------------------------------ 233
++IT YV+NE F EA LF R+
Sbjct: 277 IVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEA 336
Query: 234 -YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
YD++ V TA+++ + + A +F + KD +++ M YAQNG +EAL+LF
Sbjct: 337 GYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLF 396
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M +P ATLV+V C+ L L +GRQ H +I N F + V A+I MY +C
Sbjct: 397 QEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKC 456
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + ++ F ++ +++ WN+++ A+AQHG+Y++ L F+QM L+G D ++F+S+L
Sbjct: 457 GKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVL 516
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SA H+G V + F M++ + I P+ E Y C+VD+L RAG++++A I +
Sbjct: 517 SALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLP 576
Query: 473 TGV-WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
G+ W +LL AC + + + AA+++ E DP +S YV+LSN+YAAAG W V R+R
Sbjct: 577 DGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRK 636
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
LM+ +GV K+ S IEI N+VH FL GD SHP I+ EL + +M++
Sbjct: 637 LMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRA 687
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 212/444 (47%), Gaps = 24/444 (5%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI---- 112
I ++ G + A+Q+F+ + KDV W +I Y Q G + +F M +++
Sbjct: 46 IQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTK 105
Query: 113 VSWNCMIAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V++ ++ C + + D + Q E + A+I+ + K G + A F++
Sbjct: 106 VTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKR 165
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI----TGYVKNERFCEA 224
+ R+V+S+TAM+ ++ + AR L M VV + + Y E
Sbjct: 166 LEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEG 225
Query: 225 RELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
+ ++ + + +V V+ + + F G+L +AR LFE + +D V++N +I Y QN
Sbjct: 226 KFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQN 285
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
EA+RLF + + ++ +D T V + ++L L +G+ H LV G++ + V
Sbjct: 286 ENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVA 345
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
A++++Y RC + F + S ++++W + A+AQ+G ++AL F +M L G
Sbjct: 346 TALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRR 405
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMV----KVYGIIPSSEHYTCLVDILSRAGQLE 458
P T +++L C H + + + ++ ++ ++ T L+++ + G++
Sbjct: 406 PTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVE-----TALINMYGKCGKMA 460
Query: 459 KAWQITQGMPFEADTGVWGSLLAA 482
+A + + M + D VW S+L A
Sbjct: 461 EAMSVFEKMA-KRDILVWNSMLGA 483
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 160/322 (49%), Gaps = 7/322 (2%)
Query: 223 EARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
R + + + D +++N V +I + + G + A+ +FE ++ KD ++ MI Y
Sbjct: 22 HGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYC 81
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
Q G + AL +F M + D+ P T V++ AC++ + L +G + H +++ GFE +V
Sbjct: 82 QQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVF 141
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
V A+I MY++CG + + +F+++ ++VSW +IAA QH + A + +M L+G
Sbjct: 142 VGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDG 201
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDILSRAGQLEK 459
P+ IT ++ +A G ++E ++ L+ G++ S V++ AG L
Sbjct: 202 VVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSS--GVMESDVRVMNSAVNMFGNAGLLGD 259
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNV-ELGELAAKKMRELDPQNSAVYVMLSNLYA 518
A ++ + M + D W ++ V N N E L + ++ N +V++ N+Y
Sbjct: 260 ARRLFEDM-VDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYT 318
Query: 519 AAGMWRDVTRVRLLMKEQGVTK 540
+ + L+KE G +
Sbjct: 319 SLTSLAKGKVIHELVKEAGYDR 340
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 165/330 (50%), Gaps = 7/330 (2%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E+N +I + + G + EA ++FE + R++V ++T M+ + ++G+ D+A +
Sbjct: 36 EQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQ 95
Query: 200 MSFKNV----VSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGM 253
M ++V V++ ++ E + E+ ++ ++ +VFV TA+I + K G
Sbjct: 96 MQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGS 155
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ A F+R++ +D VS+ AMIA Q+ A L+ M + P+ TL +VF A
Sbjct: 156 VRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNA 215
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
L+EG+ + LV E++V V N+ + M+ G + D+ F + ++V+W
Sbjct: 216 YGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTW 275
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N +I + Q+ ++ +A+ F ++ +G + ITF+ +L+ + + + EL VK
Sbjct: 276 NIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHEL-VK 334
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
G + T L+ + R +AW+I
Sbjct: 335 EAGYDRDAVVATALMSLYGRCEAPGQAWKI 364
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 110/217 (50%), Gaps = 6/217 (2%)
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+PD A V++ CS+ + ++ GR+ H V GFE N VC +I MY++CG + +++
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + ++ +W +I + Q G Y++AL F QM P +T++++L+AC
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + M++ +++ G T L+++ ++ G + AW + + D W +++
Sbjct: 121 LKDGMEIHGQILQ-QGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMI 178
Query: 481 AACVINLNVELGELAAKKMRELD---PQNSAVYVMLS 514
AACV + L ++M +LD P +Y + +
Sbjct: 179 AACVQHDQFALARWLYRRM-QLDGVVPNKITLYTVFN 214
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 184/658 (27%), Positives = 314/658 (47%), Gaps = 119/658 (18%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPV 109
F+ A I + G+ + AR LF ++ + +++ WN +I G+ +NG + S +
Sbjct: 175 FLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKT 234
Query: 110 KNI----VSWNCMIAGC--------------------IDND---------------RIDD 130
+N+ S+ C ++ C ++D I+
Sbjct: 235 ENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIES 294
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS-------------- 176
A F +P++ +NA+IS ++ +G +A R+++QM V+S
Sbjct: 295 AEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSM 354
Query: 177 -------------------------YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+A+L + K G+ + A ++ M ++VV+W +
Sbjct: 355 AGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSV 414
Query: 212 ITGYVKNERFCEARELFYRM------PDYD------------------------------ 235
I+G+ +N ++ EA + F M PD D
Sbjct: 415 ISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGL 474
Query: 236 -KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+VFV ++++ + K G E A +F + K+ V++N++I+ Y +N + + ++ LFS
Sbjct: 475 QLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQ 534
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+++ D+ PD + SV A S++ L +G+ H ++R ++ V N +I MY +CG
Sbjct: 535 VLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGL 594
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ ++ F +I NLV+WN++I + HG KA+ F +M +G PD +TFLSLLS+
Sbjct: 595 LKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSS 654
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H+G + E + LFE+M +GI P EHY +VD+ RAG L A+ + MP E D
Sbjct: 655 CNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRS 714
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+W SLL +C I+LN+ELGE+ A K+ ++P + YV L NLY A +W +R MK
Sbjct: 715 IWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMK 774
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH---LELKRASVQMKSVDDFVEI 589
E+G+ K SWIE+ NKV F GD S P +I+ LKR ++ + +E+
Sbjct: 775 EKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNMIKKGAKHGIIEV 832
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 258/534 (48%), Gaps = 41/534 (7%)
Query: 11 YLKRILFPPILRILSTPDSCG-NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAA 69
Y R +P +L+ ++ + T HSS L S QY+ ++ I+ + G + A
Sbjct: 50 YTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYI--TSSLINIYVKCGTFTDA 107
Query: 70 RQLFDQM-----TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
++FDQ+ + DV WN+II GY++ G L+E F M +G +
Sbjct: 108 VKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQS----------SGYKE 157
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLDG 183
+I + M + A+I + K GR EA LF+++ R N++++ M+ G
Sbjct: 158 GKQIHSYI--VRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGG 215
Query: 184 FMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNE-------RFCEARELFYRMP 232
F + G + + +NV S+T ++ + E C+A ++
Sbjct: 216 FGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKV----- 270
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
++ + +V T+++T + K M+E+A +F + K+ +NA+I+ Y NG A +ALR++
Sbjct: 271 GFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIY 330
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M + D T+++V T+ S L + GR H +++ ++++++ +A++TMYS+
Sbjct: 331 KQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKF 390
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + F + ++V+W ++I+ F Q+ Y++AL FF M + PD S++
Sbjct: 391 GDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASII 450
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SAC KV+ + ++K G+ + L+D+ S+ G E+A I MP + +
Sbjct: 451 SACTGLEKVDLGCTIHGFVIKS-GLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK-N 508
Query: 473 TGVWGSLLAA-CVINLNVELGELAAKKMR-ELDPQNSAVYVMLSNLYAAAGMWR 524
W S+++ C NL L ++ +R +L P + + +L+ + + A + +
Sbjct: 509 LVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLK 562
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 190/392 (48%), Gaps = 31/392 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
+ + +A ++ S+ G + A +F M +DV+ W ++I+G+ QN +E+ + F++M
Sbjct: 377 ITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEA 436
Query: 108 ----PVKNIVSWNCMIAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRL 159
P +I++ +I+ C +++D ++ + + ++++ + K G
Sbjct: 437 DLVKPDSDIMA--SIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFP 494
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDYMSFKNVVSWT 209
E A +F MP +N++++ +++ + + D + L D +SF +V++
Sbjct: 495 ERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAI 554
Query: 210 VMITGYVKNERFCEARELFYRM-PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+ +K + R+ +D + V +I + K G+L+ A+ +FERI K+
Sbjct: 555 SSVAALLKGK---SVHGYLVRLWIPFD--LQVENTLIDMYIKCGLLKYAQHIFERISEKN 609
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-H 327
V++N+MI GY +G +A+ LF M ++PDD T +S+ ++C+ L+ EG
Sbjct: 610 LVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFE 669
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHY 386
++ ++ G E + ++ +Y R G + D+ + + P+ W +++ + H +
Sbjct: 670 MMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNL 729
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
E + +++ LN G ++ LL+ G A
Sbjct: 730 ELGEMVANKL-LNMEPSKGSNYVQLLNLYGEA 760
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
EAL+L++ K + T S+ AC++L L G+ H +I G ++ + +++I
Sbjct: 39 EALKLYT---KSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLI 95
Query: 347 TMYSRCGGILDSELAFRQIHSP-----NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
+Y +CG D+ F Q+ ++ WN+II + + G E+ ++ F +M +G+
Sbjct: 96 NIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGY 155
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+RL+ + V N I + G + A+ +F++++ K+++ WN++I GY +G ++
Sbjct: 570 LVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKA 629
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
LF M I V++ +++ C + I++ F+ M E Y ++
Sbjct: 630 IELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVD 689
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ + G L +A + MP
Sbjct: 690 LYGRAGCLGDAYSFVKNMP 708
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 282/520 (54%), Gaps = 31/520 (5%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNG--------FLQESKNLFQSMPVKNIVSW--NCM 118
A +LFD+M +DVI+W+ +I GY Q G FL+ + N + +VS C
Sbjct: 189 AEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACA 248
Query: 119 IAGCIDNDR------IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
G I R I DY + N++I + K E A + F +MP R
Sbjct: 249 NTGDISMGRSVHGVVICRGLDY-------DLFVGNSIIDMYSKCDDHESAFKAFNEMPCR 301
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF------CEARE 226
N +S+ +++ G ++ + +A +L M + V + +++ ++ C+
Sbjct: 302 NTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIH 361
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
Y+ N FV+ ++I + K ++E A LF+R++ KD VS++AMIAG+ G +
Sbjct: 362 SIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPD 421
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
EA+ LF M + +P+ T++S+ A S L + +H + IR G A V+V A++
Sbjct: 422 EAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAIL 481
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MY++CG I S AF QI N+VSW +IAA +G AL S+M L+G P+ +
Sbjct: 482 DMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVV 541
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
T LS+LSAC H G V E + FE MV+ +G+ P EHY+C+VD+LSRAG+L A + +
Sbjct: 542 TTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEK 601
Query: 467 MP--FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
MP G+WG+LL+AC + N LG AA ++ EL+PQ+SA Y + S++YAA+G+W
Sbjct: 602 MPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWA 661
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
D R+R L+K +GV YS + + +K F+ GD SHP
Sbjct: 662 DAARMRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHP 701
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 219/489 (44%), Gaps = 53/489 (10%)
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF 132
FD +T+ T N+++ Y + G L + +F SM ++ VSWN MI G + D
Sbjct: 66 FDSLTS----TGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGL 121
Query: 133 DYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK-- 186
+F+ E N +T I G +EE ++ + R + ++ + +
Sbjct: 122 WWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMY 181
Query: 187 -KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD------------ 233
++++A L D M ++V+SW+VMI GYV+ A +LF M
Sbjct: 182 ADNDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMV 241
Query: 234 --------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
D ++FV ++I + K E+A F + +
Sbjct: 242 SVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCR 301
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ VS+N++I+G + EAL LF M K + D+ TLV++ +C + + H
Sbjct: 302 NTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIH 361
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+VIR G+E N V N++I YS+C I + F ++ + + VSW+ +IA F G +
Sbjct: 362 SIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPD 421
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+A+ F +M P+G+T LSLL A + + S + ++ G+ T +
Sbjct: 422 EAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIR-RGLAAEVAVGTAI 480
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN--LNVELGELAAKKMRELDPQ 505
+D+ ++ G++ + + +P E + WG+++AAC +N L L+ K+ L P
Sbjct: 481 LDMYAKCGEIGLSRKAFDQIP-EKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPN 539
Query: 506 NSAVYVMLS 514
+LS
Sbjct: 540 VVTTLSVLS 548
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 133/255 (52%), Gaps = 4/255 (1%)
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+P +D +++ + K G L++A +F+ ++ +D VS+N MI G+ G +++ L
Sbjct: 63 LPGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLW 122
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
F + +P+ +TLV AC +L + EG + H +IR+GF SV N++++MY+
Sbjct: 123 WFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYA 182
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFL 409
+ +E F ++ +++SW+ +I + Q G + AL F +M N + DGIT +
Sbjct: 183 D-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMV 241
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
S+L AC + G ++ + +++ G+ ++D+ S+ E A++ MP
Sbjct: 242 SVLKACANTGDISMGRSVHGVVI-CRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPC 300
Query: 470 EADTGVWGSLLAACV 484
+T W S+++ V
Sbjct: 301 R-NTVSWNSIISGLV 314
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 156/326 (47%), Gaps = 25/326 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV N+ I S+ +A + F++M ++ ++WN+II+G + E+ +LF SM
Sbjct: 272 LFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGK 331
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM----------PERNTATYNAMISGFLKHGRL 159
+ + + + + D FQ E N N++I + K +
Sbjct: 332 AGFRADEVTLVNLLQSCKY--FVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLI 389
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS----FKNVVSWTVMITGY 215
E A +LF+++ ++ +S++AM+ GF G+ D+A AL M+ N V+ ++ +
Sbjct: 390 ELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAF 449
Query: 216 -----VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+K ++ + + V V TA++ + K G + +R F++I K+ V
Sbjct: 450 SVSADLKRSKWAHGIAIRRGLA---AEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIV 506
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVL 329
S+ AMIA NG+A +AL L S M ++P+ T +SV +ACS L+ EG +
Sbjct: 507 SWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENM 566
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGI 355
V +G E + + ++ M SR G +
Sbjct: 567 VQDHGVEPGLEHYSCMVDMLSRAGKL 592
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V A + ++ G+I +R+ FDQ+ K++++W A+I NG +++ L M +
Sbjct: 474 VAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKL 533
Query: 110 ----KNIVSWNCMIAGCIDNDRIDDAFDYFQAM-----PERNTATYNAMISGFLKHGRLE 160
N+V+ +++ C +++ +F+ M E Y+ M+ + G+L
Sbjct: 534 HGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLN 593
Query: 161 EATRLFEQMPRR 172
A L E+MP R
Sbjct: 594 SAMNLIEKMPER 605
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 286/557 (51%), Gaps = 56/557 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV T N+++ Y + G +++++ +F MPV++IV+WN M+ G + N A FQ M
Sbjct: 141 DVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMH 200
Query: 140 ERNTATYNAM-ISGFLKHGRLEEATRLFEQMPRRNVISY-------------TAMLDGFM 185
+ ++++ I L LE F M + + Y T++LD +
Sbjct: 201 DALEVQHDSVGIIAALAACCLE-----FSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYC 255
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTA-- 243
K GEV AR++ M + VV+W MI GY NER EA + F +M V VVTA
Sbjct: 256 KCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAIN 315
Query: 244 -----------------------------------MITGFCKVGMLENARLLFERIQPKD 268
++ + KVG +E++ +F +I K
Sbjct: 316 LLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKT 375
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
VS+N MIA Y + EA+ LF ++ + PD T+ +V A L L RQ H
Sbjct: 376 LVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHS 435
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
+I G+ N + NAV+ MY+R G ++ S F ++ S +++SWNT+I +A HG +
Sbjct: 436 YIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKT 495
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL F +M NG P+ TF+S+L+AC +G V+E F LM++ YG+IP EHY C+
Sbjct: 496 ALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMT 555
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
D+L R G L + Q + MP + + VWGSLL A ++++ E AA+++ +L+ N+
Sbjct: 556 DLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTG 615
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDK 568
Y++LS++YA AG W DV RVRLLMKE+G+ + S +E+ + F GDMSH
Sbjct: 616 CYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRT 675
Query: 569 IHLELKRASVQMKSVDD 585
IH S ++K DD
Sbjct: 676 IHEVSDILSRKIKETDD 692
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 143/296 (48%), Gaps = 57/296 (19%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
+D+ +++ Y + G + ++++F +MP++ +V+WNCMI G N+R D+AFD F M
Sbjct: 242 QDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQM 301
Query: 139 PERN--------------TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
A + + G HG + R F +P +V+ TA+L+ +
Sbjct: 302 RAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYV--VRRQF--LP--HVVLETALLEMY 355
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----- 233
K G+V+ + + ++ K +VSW MI Y+ E + EA LF + PD
Sbjct: 356 GKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMS 415
Query: 234 --------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
Y +N ++ A++ + + G + +R +F+++ K
Sbjct: 416 TVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSK 475
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
D +S+N MI GYA +G + AL +F M +QP+++T VSV TACS L++EG
Sbjct: 476 DVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 157/337 (46%), Gaps = 20/337 (5%)
Query: 139 PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK-----------K 187
P+R ++ +++ GR++EA + + + M+ GF +
Sbjct: 39 PKRGSS--KSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYR 96
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
G ++ A D +F VV + G + A + ++ + +V+ +++
Sbjct: 97 GMLEDG-ARPDRFTFPVVVKCCARLGGLDEGR---AAHGMVIKL-GLEHDVYTCNSLVAF 151
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDAT 306
+ K+G++E+A +F+ + +D V++N M+ GY NG+ AL F M +++Q D
Sbjct: 152 YAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVG 211
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+++ AC +G++ H VIR+G E ++ V +++ MY +CG + + F +
Sbjct: 212 IIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMP 271
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+V+WN +I +A + ++A F QM G + +T ++LL+AC
Sbjct: 272 LRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRS 331
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ +V+ +P T L+++ + G++E + +I
Sbjct: 332 VHGYVVR-RQFLPHVVLETALLEMYGKVGKVESSEKI 367
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 115/245 (46%), Gaps = 3/245 (1%)
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
+++ G ++ A ++ D N MI G+A G+ AL + GM++ +P
Sbjct: 46 SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D T V C+ L L+EGR +H +VI+ G E +V CN+++ Y++ G + D+E F
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKV 421
+ ++V+WN ++ + +G AL F +M D + ++ L+AC
Sbjct: 166 DGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSS 225
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ ++ +++ +G+ + T L+D+ + G++ A + MP W ++
Sbjct: 226 MQGKEIHGYVIR-HGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVV-TWNCMIG 283
Query: 482 ACVIN 486
+N
Sbjct: 284 GYALN 288
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 13/178 (7%)
Query: 2 LCNSYFHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALS 61
L N + Y P +L + C HS +I L + + NA + +
Sbjct: 402 LLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQI--HSY--IIGLGYAENTLIMNAVLHMYA 457
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNC 117
R+G + A+R++FD+M +KDVI+WN +I GY +G + + +F M N ++
Sbjct: 458 RSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVS 517
Query: 118 MIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMP 170
++ C + +D+ + +F M + Y M + G L E + E MP
Sbjct: 518 VLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMP 575
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 294/544 (54%), Gaps = 59/544 (10%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----E 140
N ++ Y + G L SK L S +++V+WN +++ N+++ +A +Y + M E
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 141 RNTATYNAMISG-----FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+ T ++++ L+ G+ A L N +A++D + +V R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD---------------------- 233
+ D M + + W MI GY +NE EA LF M +
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 234 ----------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
D++ FV ++ + ++G ++ A +F +++ +D V++N MI
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 278 GYAQNGVAEEALRLF-----------SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
GY + E+AL L G ++ ++P+ TL+++ +C+AL L +G++
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H I+N +V+V +A++ MY++CG + S F QI N+++WN II A+ HG+
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++A+ M + G P+ +TF+S+ +AC H+G V+E + +F +M YG+ PSS+HY C
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 447 LVDILSRAGQLEKAWQITQGMPFEAD-TGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
+VD+L RAG++++A+Q+ MP + + G W SLL A I+ N+E+GE+AA+ + +L+P
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
++ YV+L+N+Y++AG+W T VR MKEQGV K+ SWIE G++VH F+ GD SHP
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 566 IDKI 569
+K+
Sbjct: 780 SEKL 783
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 171/379 (45%), Gaps = 29/379 (7%)
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
+ F + ERN ++N++IS + E A F M NV
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV----------------- 195
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF-YRMPDYDKNVFVVTAMITGFCK 250
+ SF +VS + E +++ Y + + N F++ ++ + K
Sbjct: 196 ------EPSSF-TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGK 248
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+G L ++++L +D V++N +++ QN EAL M+ ++PD+ T+ SV
Sbjct: 249 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 308
Query: 311 FTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
ACS L++L G++ H ++NG + N V +A++ MY C +L F +
Sbjct: 309 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 368
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSACGHAGKVNESMDLF 428
+ WN +IA ++Q+ H ++AL+ F M + G + T ++ AC +G + +
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 428
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
+VK G+ L+D+ SR G+++ A +I M + D W +++ V + +
Sbjct: 429 GFVVK-RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEH 486
Query: 489 VELGELAAKKMRELDPQNS 507
E L KM+ L+ + S
Sbjct: 487 HEDALLLLHKMQNLERKVS 505
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 5/249 (2%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+V V ++ + K G +F+RI ++ VS+N++I+ E AL F M+
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 297 KMDMQPDDATLVSVFTACSALQL---LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
+++P TLVSV TACS L + L G+Q H +R G E N + N ++ MY + G
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 250
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ S++ +LV+WNT++++ Q+ +AL + +M L G +PD T S+L
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H + +L +K + +S + LVD+ Q+ ++ GM F+
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKI 369
Query: 474 GVWGSLLAA 482
G+W +++A
Sbjct: 370 GLWNAMIAG 378
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/523 (20%), Positives = 229/523 (43%), Gaps = 38/523 (7%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+ V V N ++ + G A ++FD+++ ++ ++WN++I+ + + F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 105 QSMPVKNI----VSWNCMIAGCIDNDRID------DAFDYFQAMPERNTATYNAMISGFL 154
+ M +N+ + ++ C + + Y E N+ N +++ +
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYG 247
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
K G+L + L R+++++ +L + ++ +A M + V I+
Sbjct: 248 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 215 YVKN----ERFCEARELF-YRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ E +EL Y + + D+N FV +A++ +C + + R +F+ + +
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQS 326
+NAMIAGY+QN +EAL LF GM + + + T+ V AC +
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H V++ G + + V N ++ MYSR G I + F ++ +LV+WNT+I + H+
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 387 EKALIFFSQM-----------GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
E AL+ +M P+ IT +++L +C + + ++ +K
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-N 546
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
+ + LVD+ ++ G L+ + ++ +P + + W ++ A ++ N G+ A
Sbjct: 547 NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQEA 602
Query: 496 AKKMRELDPQ----NSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+R + Q N ++ + + +GM + R+ +MK
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
++ ++ + EA+ + MI + ++PD+ ++ A + LQ + G+Q H V + G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 335 FEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
+ + V+V N ++ +Y +CG F +I N VSWN++I++ +E AL F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 394 SQMGLNGFDPDGITFLSLLSAC 415
M +P T +S+++AC
Sbjct: 188 RCMLDENVEPSSFTLVSVVTAC 209
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V +A + ++ G + +R++FDQ+ K+VITWN II Y +G QE+ +L + M V
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 611
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLE 160
+ N V++ + A C + +D+ F M E ++ Y ++ + GR++
Sbjct: 612 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 671
Query: 161 EATRLFEQMPR 171
EA +L MPR
Sbjct: 672 EAYQLMNMMPR 682
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 196/644 (30%), Positives = 302/644 (46%), Gaps = 116/644 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R Q V+V + I S+ G I AR +FDQ+ K +TW II GY + G S
Sbjct: 63 VVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVS 122
Query: 101 KNLFQSMPVKNIVS---------------------------------------WNCMIAG 121
LF M N+V N +I
Sbjct: 123 LELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDF 182
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR---------- 171
+R+ F M +N ++ MISG++++ EA +LF +M R
Sbjct: 183 YTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFAC 242
Query: 172 ----------------RNVISYT-------------AMLDGFMKKGEVDKARALSDYMSF 202
R V +YT ++D + K + A+ + D M+
Sbjct: 243 TSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAE 302
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRM------------------------------- 231
+NV+S+ MI GY E+ EA ELF+ M
Sbjct: 303 QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQI 362
Query: 232 ------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
++F +A+I + K +++AR +FE + KD V +NAM GY Q+
Sbjct: 363 HGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLEN 422
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EEAL+L+S + +P++ T ++ TA S L L G+Q H +++ G + V NA+
Sbjct: 423 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 482
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ MY++CG I ++ F ++V WN++I+ AQHG E+AL F +M G P+
Sbjct: 483 VDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNY 542
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
+TF+++LSAC HAG V + ++ F M +GI P +EHY C+V +L R+G+L +A + +
Sbjct: 543 VTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIE 601
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
MP E VW SLL+AC I NVELG+ AA+ DP++S Y++LSN++A+ GMW D
Sbjct: 602 KMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWAD 661
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
V +VR M V K+ SWIE+ NKV+ F+ +H D I
Sbjct: 662 VKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMI 705
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
Query: 283 GVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
G +EEAL +F + K P++ L SV AC+ L ++ +G Q H V+R+GF+ +V V
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
++I YS+ G I + L F Q+ V+W TIIA + + G +L F+QM
Sbjct: 75 GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134
Query: 402 DPDGITFLSLLSAC 415
PD S+LSAC
Sbjct: 135 VPDRYVVSSVLSAC 148
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 270/472 (57%), Gaps = 13/472 (2%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
M A C RI+ A + F M +R+ T+N MI + + G L+EA +LFE+M NV+
Sbjct: 158 MYAAC---GRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPD 214
Query: 178 TAMLDGFM----KKGEVDKARALSDYMSFKNVVS----WTVMITGYVKNERFCEARELFY 229
+L + + G + RA+ D++ +V T ++T Y A E F
Sbjct: 215 EMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFR 274
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+M +N+FV TAM++G+ K G L++AR++F++ + KD V + MI+ YA++ +EAL
Sbjct: 275 KMSV--RNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEAL 332
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
R+F M ++PD T++SV +AC L L++ + H NG E+ + + NA+I MY
Sbjct: 333 RVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMY 392
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++CGG+ + F ++ + N+VSW+++I AFA HG +L F+QM +P+ +TF+
Sbjct: 393 AKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFV 452
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
+L C H+G V E +F M Y I P EHY C+VD+ RA L +A ++ + MP
Sbjct: 453 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPM 512
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ +WGSL++AC ++ +ELGELAAK++ +L+P + V++SN+YA W V +
Sbjct: 513 APNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRII 572
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
R +M+++ V K+ S I++ K H FL GD H ++I+ +L ++K
Sbjct: 573 RWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLK 624
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 198/422 (46%), Gaps = 50/422 (11%)
Query: 14 RILFPPILRILSTPDSC-GNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQL 72
RI FPPIL+ +S + H I S FV + + G+I+ AR +
Sbjct: 114 RISFPPILKAVSKVSALFEGMELHGFAFKIATLSDP--FVETGLMDMYAACGRINYARNV 171
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI------AGCIDND 126
FD+M+ +DV+TWN +I Y + G L E+ LF+ M N++ ++ G N
Sbjct: 172 FDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 231
Query: 127 RIDDA-FDYFQAMPER-NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
R + A +D+ R +T A+++ + G ++ A F +M RN+ TAM+ G+
Sbjct: 232 RYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGY 291
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDYDKNV 238
K G +D AR + D K++V WT MI+ Y +++ EA +F M PD +
Sbjct: 292 SKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTML 351
Query: 239 FVVT-------------------------------AMITGFCKVGMLENARLLFERIQPK 267
V++ A+I + K G L+ AR +FE++ +
Sbjct: 352 SVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTR 411
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ VS+++MI +A +G A ++L LF+ M + +++P++ T V V CS L+ EG++
Sbjct: 412 NVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 471
Query: 328 V-LVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+ + ++ ++ R + ++ E+ +PN+V W ++++A HG
Sbjct: 472 ASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGE 531
Query: 386 YE 387
E
Sbjct: 532 LE 533
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 133/277 (48%), Gaps = 37/277 (13%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
FV T ++ + G + AR +F+ + +D V++N MI Y + G+ +EA +LF M
Sbjct: 150 FVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDS 209
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM---------- 348
++ PD+ L ++ +AC + R + +I N + + A++TM
Sbjct: 210 NVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMA 269
Query: 349 ---------------------YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
YS+ G + D+ + F Q +LV W T+I+A+A+ H +
Sbjct: 270 MEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQ 329
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES--MDLFELMVKVYGIIPSSEHYT 445
+AL F +M +G PD +T LS++SAC + G ++++ + + + + ++P
Sbjct: 330 EALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPID---N 386
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+++ ++ G L+ A + + MP + W S++ A
Sbjct: 387 ALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINA 422
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 260 LFERIQP-KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
LF I P + + FN+++ +++G + + + + + D + + A S +
Sbjct: 69 LFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVS 128
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L EG + H + ++ V ++ MY+ CG I + F ++ ++V+WNT+I
Sbjct: 129 ALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIE 188
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+ + G ++A F +M + PD + +++SACG G + + +++ +++ +
Sbjct: 189 RYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIE-NDVR 247
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+ T LV + + AG ++ A + + M
Sbjct: 248 MDTHLLTALVTMYAGAGCMDMAMEFFRKM 276
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/472 (34%), Positives = 270/472 (57%), Gaps = 28/472 (5%)
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
F+ + T +++I+ + + GR+ A ++F+++PRR+++S+ +M+ G+ K G +A
Sbjct: 143 FKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAV 202
Query: 195 AL-----------SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTA 243
+ D MS +V+ G + + E F N ++ +A
Sbjct: 203 EVFGEMGRRDGFEPDEMSLVSVLG----ACGELGDLELGRWVEGFVVERGMTLNSYIGSA 258
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+I+ + K G L +AR +F+ + +D +++NA+I+GYAQNG+A+EA+ LF M + + +
Sbjct: 259 LISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTEN 318
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
TL +V +AC+ + L+ G+Q + GF+ ++ V A+I MY++CG + ++ F+
Sbjct: 319 KITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFK 378
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG--LNGFDPDGITFLSLLSACGHAGKV 421
++ N SWN +I+A A HG ++AL F M G P+ ITF+ LLSAC HAG V
Sbjct: 379 EMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLV 438
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
NE LF++M ++G++P EHY+C+VD+L+RAG L +AW + + MP + D G+LL
Sbjct: 439 NEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLG 498
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC NV++GE + + E+DP NS Y++ S +YA MW D R+RLLM+++G+TK
Sbjct: 499 ACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKT 558
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHL---------ELKRASVQMKSVD 584
SWIE+ N +H F GD C+D I L ELKR K V+
Sbjct: 559 PGCSWIEVENHLHEFHAGD--GLCLDSIDLSNIIDLLYEELKREGYVPKVVE 608
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 52/250 (20%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
++ +A IS ++ G + +AR++FD M +DVITWNA+I+GY QNG E+ +LF +M
Sbjct: 254 YIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKED 313
Query: 109 --VKNIVSWNCMIAGC-----------IDNDRIDDAFDY--------------------- 134
+N ++ +++ C ID F +
Sbjct: 314 CVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASA 373
Query: 135 ---FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRRNVISYTAMLDGFM 185
F+ MP++N A++NAMIS HG+ +EA LF+ M R N I++ +L +
Sbjct: 374 QRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACV 433
Query: 186 KKGEVDKARALSDYMS-----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
G V++ L D MS + ++ M+ + EA +L +MP +K V
Sbjct: 434 HAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMP--EKPDKV 491
Query: 241 VTAMITGFCK 250
+ G C+
Sbjct: 492 TLGALLGACR 501
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 121/233 (51%), Gaps = 5/233 (2%)
Query: 257 ARLLFERIQPK-DCVSFNAMIAGYAQNGVAEE-ALRLFSGMIKMDMQPDDATLVSVFTAC 314
A LLF I P + +FN MI AL LF M+ + + P++ T F +C
Sbjct: 67 ASLLFSHIAPHPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSC 126
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ L +L+ R +H LV + ++ +++ITMYSRCG + + F +I +LVSWN
Sbjct: 127 ANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWN 186
Query: 375 TIIAAFAQHGHYEKALIFFSQMG-LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
++IA +A+ G +A+ F +MG +GF+PD ++ +S+L ACG G + E E V
Sbjct: 187 SMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDL-ELGRWVEGFVV 245
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
G+ +S + L+ + ++ G L A +I GM D W ++++ N
Sbjct: 246 ERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAAR-DVITWNAVISGYAQN 297
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV A I ++ G +++A+++F +M K+ +WNA+I+ +G +E+ +LFQ M
Sbjct: 354 IFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSD 413
Query: 110 K------NIVSWNCMIAGCIDNDRIDDAFDYFQAMPE-----RNTATYNAMISGFLKHGR 158
+ N +++ +++ C+ +++ + F M Y+ M+ + G
Sbjct: 414 EGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGH 473
Query: 159 LEEATRLFEQMPRR-NVISYTAMLDGFMKKGEVD 191
L EA L E+MP + + ++ A+L K VD
Sbjct: 474 LYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVD 507
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 294/544 (54%), Gaps = 59/544 (10%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----E 140
N ++ Y + G L SK L S +++V+WN +++ N+++ +A +Y + M E
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 141 RNTATYNAMISG-----FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+ T ++++ L+ G+ A L N +A++D + +V R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD---------------------- 233
+ D M + + W MI GY +NE EA LF M +
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 234 ----------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
D++ FV ++ + ++G ++ A +F +++ +D V++N MI
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 278 GYAQNGVAEEALRLF-----------SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
GY + E+AL L G ++ ++P+ TL+++ +C+AL L +G++
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H I+N +V+V +A++ MY++CG + S F QI N+++WN II A+ HG+
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++A+ M + G P+ +TF+S+ +AC H+G V+E + +F +M YG+ PSS+HY C
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 447 LVDILSRAGQLEKAWQITQGMPFEAD-TGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
+VD+L RAG++++A+Q+ MP + + G W SLL A I+ N+E+GE+AA+ + +L+P
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
++ YV+L+N+Y++AG+W T VR MKEQGV K+ SWIE G++VH F+ GD SHP
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 566 IDKI 569
+K+
Sbjct: 780 SEKL 783
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 171/379 (45%), Gaps = 29/379 (7%)
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
+ F + ERN ++N++IS + E A F M NV
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV----------------- 195
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF-YRMPDYDKNVFVVTAMITGFCK 250
+ SF +VS + E +++ Y + + N F++ ++ + K
Sbjct: 196 ------EPSSF-TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGK 248
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+G L ++++L +D V++N +++ QN EAL M+ ++PD+ T+ SV
Sbjct: 249 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 308
Query: 311 FTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
ACS L++L G++ H ++NG + N V +A++ MY C +L F +
Sbjct: 309 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 368
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSACGHAGKVNESMDLF 428
+ WN +IA ++Q+ H ++AL+ F M + G + T ++ AC +G + +
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 428
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
+VK G+ L+D+ SR G+++ A +I M + D W +++ V + +
Sbjct: 429 GFVVK-RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEH 486
Query: 489 VELGELAAKKMRELDPQNS 507
E L KM+ L+ + S
Sbjct: 487 HEDALLLLHKMQNLERKVS 505
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 5/249 (2%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+V V ++ + K G +F+RI ++ VS+N++I+ E AL F M+
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 297 KMDMQPDDATLVSVFTACSALQL---LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
+++P TLVSV TACS L + L G+Q H +R G E N + N ++ MY + G
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 250
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ S++ +LV+WNT++++ Q+ +AL + +M L G +PD T S+L
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H + +L +K + +S + LVD+ Q+ ++ GM F+
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKI 369
Query: 474 GVWGSLLAA 482
G+W +++A
Sbjct: 370 GLWNAMIAG 378
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/523 (20%), Positives = 229/523 (43%), Gaps = 38/523 (7%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+ V V N ++ + G A ++FD+++ ++ ++WN++I+ + + F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 105 QSMPVKNI----VSWNCMIAGCIDNDRID------DAFDYFQAMPERNTATYNAMISGFL 154
+ M +N+ + ++ C + + Y E N+ N +++ +
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYG 247
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
K G+L + L R+++++ +L + ++ +A M + V I+
Sbjct: 248 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 215 YVKN----ERFCEARELF-YRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ E +EL Y + + D+N FV +A++ +C + + R +F+ + +
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQS 326
+NAMIAGY+QN +EAL LF GM + + + T+ V AC +
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H V++ G + + V N ++ MYSR G I + F ++ +LV+WNT+I + H+
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 387 EKALIFFSQM-----------GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
E AL+ +M P+ IT +++L +C + + ++ +K
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-N 546
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
+ + LVD+ ++ G L+ + ++ +P + + W ++ A ++ N G+ A
Sbjct: 547 NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQEA 602
Query: 496 AKKMRELDPQ----NSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+R + Q N ++ + + +GM + R+ +MK
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
++ ++ + EA+ + MI + ++PD+ ++ A + LQ + G+Q H V + G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 335 FEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
+ + V+V N ++ +Y +CG F +I N VSWN++I++ +E AL F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 394 SQMGLNGFDPDGITFLSLLSAC 415
M +P T +S+++AC
Sbjct: 188 RCMLDENVEPSSFTLVSVVTAC 209
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V +A + ++ G + +R++FDQ+ K+VITWN II Y +G QE+ +L + M V
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 611
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLE 160
+ N V++ + A C + +D+ F M E ++ Y ++ + GR++
Sbjct: 612 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 671
Query: 161 EATRLFEQMPR 171
EA +L MPR
Sbjct: 672 EAYQLMNMMPR 682
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 290/546 (53%), Gaps = 20/546 (3%)
Query: 54 NAKISAL-SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV--- 109
N K++A + G +S A +FD + K+ WN +I GY NG +S L++ M
Sbjct: 98 NTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQ 157
Query: 110 -KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATR 164
+ ++ ++ C D ++ + E + N++++ + K G + A
Sbjct: 158 RADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARM 217
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY--------- 215
+F++M R++ S+ M+ G+ K + A + D M + + + G
Sbjct: 218 VFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKA 277
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
VK + + + +Y+K F ++I +C + +AR LFER++ KD VS+N+M
Sbjct: 278 VKEGKVIHGYAVRNSIGNYNK--FFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSM 335
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I GYA+NG A E+LRLF M PD T ++V AC + L G H +++ GF
Sbjct: 336 ILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGF 395
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+AN V A++ MYS+CG + S F ++ +LVSW+ ++A + HG +A+
Sbjct: 396 DANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDG 455
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M N PD F S+LSAC HAG V E ++F M K Y + P+ HY+C+VD+L RAG
Sbjct: 456 MKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAG 515
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
L++A+ I + M + + +W +LL A ++ N++L E++A+K+ +++P+ + Y+ LSN
Sbjct: 516 HLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSN 575
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+YAA W DV RVR +++ +G+ K S+IE+ N VH FL GD SH + I+ +L
Sbjct: 576 IYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNE 635
Query: 576 ASVQMK 581
Q+K
Sbjct: 636 LKQQLK 641
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 112/216 (51%), Gaps = 3/216 (1%)
Query: 211 MITGYVKNERFCEARELFYRMPDY---DKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
++ + + F + ++L M + + N ++ T + + G++ A ++F+ I K
Sbjct: 65 LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ +N MI GYA NG+ ++L L+ M+ + D+ T V AC L L+ GR+ H
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVH 184
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
V+ G E+++ V N+++ MY++ G + + + F ++ +L SWNT+I+ +A++
Sbjct: 185 SEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSG 244
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
A + F MG G D T L LLSAC V E
Sbjct: 245 TAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKE 280
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 196/430 (45%), Gaps = 60/430 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V N+ ++ ++ G + AR +FD+M +D+ +WN +I+GY +N + +F M
Sbjct: 196 IYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGK 255
Query: 110 KNIVSWNC-----MIAGCID-----NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+ + +C +++ C D ++ + ++ N N++I + +
Sbjct: 256 AGLFA-DCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCM 314
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITG- 214
+A RLFE++ ++ +S+ +M+ G+ + G+ ++ L M+ + V++ ++
Sbjct: 315 VDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGAC 374
Query: 215 -YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ R+ + + +D N V TA++ + K G L +R +F+ + K VS++
Sbjct: 375 DQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWS 434
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AM+AGY +G EA+ + GM + PD+ S+ +ACS L+ EG++ + +
Sbjct: 435 AMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKE---IFYKM 491
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
E NV P L ++ ++ + GH ++A +
Sbjct: 492 EKEYNV---------------------------KPALSHYSCMVDLLGRAGHLDEAYVII 524
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIPS-SEHYTCLVDIL 451
M + P + +LL+ A ++++++ L E+ KV+ + P Y CL +I
Sbjct: 525 RTMEIK---PTSDIWAALLT----ASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIY 577
Query: 452 SRAGQLEKAW 461
+ EK W
Sbjct: 578 A----AEKRW 583
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 127/267 (47%), Gaps = 38/267 (14%)
Query: 12 LKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQ 71
LK + ++ + +S GN+ +N LI ++ V+ AR+
Sbjct: 275 LKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVD---------------ARR 319
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDNDR 127
LF+++ KD ++WN++I GY +NG ES LF+ M + + V++ ++ C D+
Sbjct: 320 LFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGAC---DQ 376
Query: 128 IDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
I A Y ++ + NT A++ + K G L + R+F++MP ++++S++A
Sbjct: 377 I-AALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSA 435
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVS----WTVMITGYVKNERFCEARELFYRMPDYD 235
M+ G+ G +A ++ D M +V+ +T +++ E +E+FY+M +
Sbjct: 436 MVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKM---E 492
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFE 262
K V A+ C V +L A L E
Sbjct: 493 KEYNVKPALSHYSCMVDLLGRAGHLDE 519
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 186/566 (32%), Positives = 287/566 (50%), Gaps = 88/566 (15%)
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNC--------MIAGCIDNDRIDDAFDYFQAMPERNTA 144
N L+ K + S+ + + SWN M A C +I+DA++ F MPER+
Sbjct: 42 DNSDLKRGKEIHGSV-ITSGFSWNLFAMTGVVNMYAKC---RQINDAYNMFDRMPERDLV 97
Query: 145 TYNAMISGFLKHGRLEEAT----RLFEQMPRRNVISY----------------------- 177
+N MISG+ ++G + A R+ E+ R + I+
Sbjct: 98 CWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYV 157
Query: 178 ------------TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
TA++D + K G V AR + D M + VVSW MI GYV++ A
Sbjct: 158 LRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAM 217
Query: 226 ELFYRMPD-------------------------------------YDKNVFVVTAMITGF 248
+F +M D D +V V+ ++I+ +
Sbjct: 218 LIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMY 277
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K ++ A +F+ ++ K VS+NAMI GYAQNG EAL F M +++PD T+V
Sbjct: 278 SKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMV 337
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
SV A + L + + + H LVIR + NV V A++ MY++CG I + F +++
Sbjct: 338 SVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNAR 397
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
++++WN +I + HG + ++ F +M P+ ITFL LSAC H+G V E + F
Sbjct: 398 HVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFF 457
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
E M K YGI P+ +HY +VD+L RAG+L +AW Q MP + V+G++L AC I+ N
Sbjct: 458 ESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKN 517
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
V+LGE AA ++ +L+P + +V+L+N+YA A MW V +VR +M++ G+ K S +E
Sbjct: 518 VDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVE 577
Query: 549 IGNKVHYFLGGDMSHPCIDKIHLELK 574
IGN+VH F G SHP KI+ L+
Sbjct: 578 IGNEVHSFYSGTTSHPQSKKIYSYLE 603
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 132/258 (51%), Gaps = 6/258 (2%)
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELFYRM--PD 233
ML G+ K +D A + M +V ++T ++ N +E+ +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ N+F +T ++ + K + +A +F+R+ +D V +N MI+GYAQNG A+ AL L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + +PD T+VS+ A + +LL G H V+R GFE+ V+V A++ MYS+CG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ + + F + +VSWN++I + Q G E A++ F +M G P +T + L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 414 ACGHAGKVNESMDLFELM 431
AC G + + +L+
Sbjct: 241 ACADLGDLERGKFVHKLV 258
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 142/362 (39%), Gaps = 88/362 (24%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V+ A + S+ G +S AR +FD M + V++WN++I GY Q+G + + +FQ M
Sbjct: 166 VNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLD 225
Query: 110 KNIVSWNCMIAGC------------------------IDND---------------RIDD 130
+ + N + G +D+D R+D
Sbjct: 226 EGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDI 285
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM--------------------- 169
A D F+ + + ++NAMI G+ ++G + EA F +M
Sbjct: 286 AADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAE 345
Query: 170 ---PR---------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
PR +NV TA++D + K G + AR L D M+ ++V++W M
Sbjct: 346 LSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAM 405
Query: 212 ITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
I GY + + ELF M N ++ G++E FE ++
Sbjct: 406 IDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYG 465
Query: 270 VS-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ + AM+ + G +A KM ++P ++ AC + ++ G
Sbjct: 466 IEPTMDHYGAMVDLLGRAGRLNQAWDFIQ---KMPIKPGITVYGAMLGACKIHKNVDLGE 522
Query: 325 QS 326
++
Sbjct: 523 KA 524
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR F + VFV A + ++ G I AR+LFD M + VITWNA+I GY +G + S
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS 418
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
LF+ M I +++ C ++ C + +++ +F++M E Y AM+
Sbjct: 419 VELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVD 478
Query: 152 GFLKHGRLEEATRLFEQMP-RRNVISYTAML 181
+ GRL +A ++MP + + Y AML
Sbjct: 479 LLGRAGRLNQAWDFIQKMPIKPGITVYGAML 509
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/464 (35%), Positives = 261/464 (56%), Gaps = 47/464 (10%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV 205
+ ++IS + ++GRLE+A ++F++ R+V+SYTA++ G+ +G ++ A+ + D + K+V
Sbjct: 113 HTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDV 172
Query: 206 VSWTVMITGYVKNERFCEARELFYRM------PD-------------------------- 233
VSW MI+GY + + +A ELF M PD
Sbjct: 173 VSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSW 232
Query: 234 -----YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+ N+ +V A+I + K G +E A L E + KD +S+N +I GY + +EA
Sbjct: 233 INDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEA 292
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA---- 344
L LF M++ P+D T++S+ AC+ L ++ GR HV + + V V NA
Sbjct: 293 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK--LKGVVVTNASSLR 350
Query: 345 --VITMYSRCGGI-LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
+I MY++CG I +++ + +L +WN +I FA HG A FS+M NG
Sbjct: 351 TSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGI 410
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
+PD ITF+ LLSAC H+G ++ ++F M + Y I P EHY C++D+L +G ++A
Sbjct: 411 EPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAE 470
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
++ MP E D +W SLL AC I+ N+ELGE AKK+ +++P+N YV+LSN+YA AG
Sbjct: 471 EMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAG 530
Query: 522 MWRDVTRVRLLMKEQGVTKQC-AYSWIEIGNKVHYFLGGDMSHP 564
W +V ++R L+ ++G+ K+ S IEI + VH F+ GD HP
Sbjct: 531 KWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHP 574
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 180/364 (49%), Gaps = 44/364 (12%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS------FKNVVSWTVMI 212
L A +FE +P N + + M G D AL Y+ N ++ ++
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSS--DPVSALKLYVVMISLGLLPNFFTFPFLL 82
Query: 213 TGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
K++ F E +++ + +D +++V T++I+ + + G LE+A+ +F+R +D V
Sbjct: 83 KSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVV 142
Query: 271 SFNAMIAGYAQNGVAE-------------------------------EALRLFSGMIKMD 299
S+ A+I GYA G E +AL LF M+K +
Sbjct: 143 SYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN 202
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++PD++T+ +V +AC+ + GRQ H + +GF +N+ + NA+I +YS+CG + +
Sbjct: 203 VKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETAC 262
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
+ + +++SWNT+I + Y++AL+ F +M +G P+ +T LS+L AC H G
Sbjct: 263 ELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 322
Query: 420 KVNESMDLFELM-VKVYGIIPS--SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
++ + + K+ G++ + S T L+D+ ++ G ++ A Q++ F W
Sbjct: 323 AIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTW 382
Query: 477 GSLL 480
+++
Sbjct: 383 NAMI 386
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 240/542 (44%), Gaps = 97/542 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ + IS ++ G++ A+++FD+ + +DV+++ A+ITGY G+++ ++ +F +P+
Sbjct: 110 LYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPI 169
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
K++VSWN MI+G + A + F+ M + N +T ++S + G +E ++
Sbjct: 170 KDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQV 229
Query: 166 FEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ A++D + K GEV+ A L + +S K+V+SW +I GY +
Sbjct: 230 HSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLY 289
Query: 222 CEARELFYRM------PD--------------------------YDKNVFVV-------- 241
EA LF M P+ DK + V
Sbjct: 290 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSL 349
Query: 242 -TAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
T++I + K G ++ A + + + ++NAMI G+A +G A A +FS M K
Sbjct: 350 RTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNG 409
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++PDD T V + +ACS +L+ GR + R
Sbjct: 410 IEPDDITFVGLLSACSHSGMLDLGRN----IFR--------------------------- 438
Query: 360 LAFRQIH--SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ RQ + +P L + +I G +++A + M + +PDG+ + SLL AC
Sbjct: 439 -SMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPM---EPDGVIWCSLLKACKI 494
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
G + + ++K+ P S Y L +I + AG+ + +I + D G+
Sbjct: 495 HGNLELGESFAKKLIKIEPENPGS--YVLLSNIYATAGKWNEVXKIRTLL---NDKGMKK 549
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVY---VMLSNLYAAAGMWRDVTRVRLLMK 534
+ I ++ + E +L PQN +Y + L AG D + V M+
Sbjct: 550 KVPGCSSIEIDSVVHEFIIGD--KLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEME 607
Query: 535 EQ 536
E+
Sbjct: 608 EE 609
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 36/295 (12%)
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+FE I + + +N M G+A + AL+L+ MI + + P+ T + +C+ +
Sbjct: 31 VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA------------------ 361
EG+Q H V++ GF+ ++ V ++I+MY++ G + D++
Sbjct: 91 FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150
Query: 362 -------------FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
F +I ++VSWN +I+ +A+ G+Y+KAL F +M PD T
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+++SAC +G + + + +G + + L+D+ S+ G++E A ++ +G+
Sbjct: 211 ATVVSACAQSGSIELGRQVHS-WINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLS 269
Query: 469 FEADTGVWGSLLAACV-INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
D W +L+ +NL E L + +R + N MLS L A A +
Sbjct: 270 -NKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV--TMLSILPACAHL 321
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 296/566 (52%), Gaps = 42/566 (7%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q + V+ A SA +R G + A+++FD+ +DV++WNA++ Y Q+G + E+ LF M
Sbjct: 258 QTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317
Query: 108 PVKNI---------VSWNC-------MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
+ I S C MI GC +D R+ NA++
Sbjct: 318 LHEGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLD-----------RDIVLGNALLD 366
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV----S 207
+ + G EEA LF+++P N +S+ M+ G +KG++ +A L M + + +
Sbjct: 367 MYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRAT 425
Query: 208 WTVMITGYVKNER----FCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLF 261
+ ++ N E R+L R+ Y + TA++ + G ++ A F
Sbjct: 426 YLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASF 485
Query: 262 ER---IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+R D VS+NA+I+ +Q+G + AL F M + P+ T V+V AC+
Sbjct: 486 QRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTII 377
L EG H + +G E+N+ V A+ +MY RCG + + F ++ ++V +N +I
Sbjct: 546 ALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
AA++Q+G +AL F +M G PD +F+S+LSAC H G +E ++F M + YGI
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAK 497
PS +HY C VD+L RAG L A ++ + M + VW +LL AC +V+ G LA
Sbjct: 666 APSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANS 725
Query: 498 KMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
+RELDP + + YV+LSN+ A AG W + VR M+ +G+ K+ SWIEI ++VH F+
Sbjct: 726 MVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFV 785
Query: 558 GGDMSHPCIDKIHLELKRASVQMKSV 583
GD SHP ++I+ EL+R +++ +
Sbjct: 786 AGDRSHPRSEEIYRELERLHAEIREI 811
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 226/439 (51%), Gaps = 28/439 (6%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMI 119
G +++A LF++M +D+++WNA I Q+G L + LFQ M ++ + ++ +
Sbjct: 177 GCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIAL 235
Query: 120 AGCIDNDRIDDAFDYF--QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
C R A + ++ E+ A+ S + + G L +A +F++ R+V+S+
Sbjct: 236 TVCA-TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSW 294
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------ 231
AML + + G + +A L M + + V + V C + F RM
Sbjct: 295 NAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTL---VNASTGCSSLR-FGRMIHGCAL 350
Query: 232 -PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
D+++ + A++ + + G E AR LF+RI P + VS+N MIAG +Q G + A+
Sbjct: 351 EKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVE 409
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSA----LQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
LF M M P AT +++ A ++ + + EGR+ H ++ G+ + ++ AV+
Sbjct: 410 LFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVV 469
Query: 347 TMYSRCGGILDSELAFRQ---IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
MY+ CG I ++ +F++ ++VSWN II++ +QHGH ++AL FF +M L+G P
Sbjct: 470 KMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAP 529
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ IT +++L AC A + E ++ ++ G+ + T L + R G LE A +I
Sbjct: 530 NQITCVAVLDACAGAAALTEG-EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREI 588
Query: 464 TQGMPFEADTGVWGSLLAA 482
+ + E D ++ +++AA
Sbjct: 589 FEKVAVERDVVIFNAMIAA 607
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 177/357 (49%), Gaps = 20/357 (5%)
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI---------VSWNCMIAG 121
++F ++ +D +W IIT Y ++G + + +F M + + V C G
Sbjct: 83 EVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLG 142
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
+ R A+ + ++ N ++ + G + A LFE+M R +++S+ A +
Sbjct: 143 DLSQGRSIHAWIVESGLKGKSVLA-NLLLHIYGSCGCVASAMLLFEKMER-DLVSWNAAI 200
Query: 182 DGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
+ G++ A L M + V ++ + +T R +A R ++
Sbjct: 201 AANAQSGDLGIALELFQRMQLEGVRPARITLVIALT-VCATIRQAQAIHFIVRESGLEQT 259
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ V TA+ + + ++G L A+ +F+R +D VS+NAM+ YAQ+G EA LF+ M+
Sbjct: 260 LVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLH 319
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+ P TLV+ T CS+L+ GR H + G + ++ + NA++ MY+RCG +
Sbjct: 320 EGISPSKVTLVNASTGCSSLRF---GRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEE 376
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ F++I N VSWNT+IA +Q G ++A+ F +M L G P T+L+LL A
Sbjct: 377 ARHLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 173/369 (46%), Gaps = 59/369 (15%)
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAML 181
+ + D + F + R+ A++ +I+ + +HG+ + A +F +M + V +++ A+L
Sbjct: 76 ESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVL 135
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
+ G++ + R++ ++ + +V+ N+ +
Sbjct: 136 KACARLGDLSQGRSIHAWIVESGLKGKSVL------------------------ANLLL- 170
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
I G C G + +A LLFE+++ +D VS+NA IA AQ+G AL LF M ++
Sbjct: 171 --HIYGSC--GCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVR 225
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P TLV T C+ ++ + + H +V +G E + V A+ + Y+R G + ++
Sbjct: 226 PARITLVIALTVCATIR---QAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEV 282
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG----- 416
F + ++VSWN ++ A+AQHGH +A + F++M G P +T ++ + C
Sbjct: 283 FDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRFG 342
Query: 417 ---HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
H + + +D ++ L+D+ +R G E+A + + +P A +
Sbjct: 343 RMIHGCALEKGLDRDIVL------------GNALLDMYTRCGSPEEARHLFKRIPCNAVS 390
Query: 474 GVWGSLLAA 482
W +++A
Sbjct: 391 --WNTMIAG 397
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
A LV + A +LL++GR+ H ++ G E + N ++ +Y +C + D E F +
Sbjct: 30 AHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSR 87
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ + SW TII A+ +HG ++A+ F +M G D +TFL++L AC G +++
Sbjct: 88 LEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+ +V+ G+ S L+ I G + A + + M E D W + +AA
Sbjct: 148 RSIHAWIVE-SGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM--ERDLVSWNAAIAA-- 202
Query: 485 INLNVELGELA 495
N + G+L
Sbjct: 203 ---NAQSGDLG 210
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 280/545 (51%), Gaps = 45/545 (8%)
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE 140
V+ N ++ Y + GF+ ++ +F MP ++ +++N MI GC R +A + F AM
Sbjct: 168 VVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRR 227
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQM--------PRRNVISYTAMLDGFMKKGEVDK 192
T + S L L Q+ P NV A+LD + K +
Sbjct: 228 EGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGD 287
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNV------------ 238
+ L D MS ++ VS+ VMI+ N A +LF M +D+
Sbjct: 288 LKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGA 347
Query: 239 -----------------------FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
FV A+I + K GML+ A+ +F K +S+ A+
Sbjct: 348 LPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTAL 407
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I G QNG EEAL+LF M + + PD AT S+ + S+L ++ GRQ H + ++G
Sbjct: 408 ITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGH 467
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+V +A++ MY++CG + ++ F ++ N ++WN +I+A+AQ+G + A+ F
Sbjct: 468 MPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDS 527
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G PD +TFLS+L+ACGH G E M F+LM Y + P EHY+C++D L RAG
Sbjct: 528 MLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTLGRAG 587
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+K ++ MPFE D +W S+L +C I N +L +AA+K+ + P ++ YV+LSN
Sbjct: 588 CFDKIQKVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAEKLFTMVPTDATAYVILSN 647
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+YA AG W RV+ +M+++GV K+ SW+EI K++ F D ++P ID+I EL+R
Sbjct: 648 IYAKAGNWEGAARVKKIMRDRGVKKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKKELER 707
Query: 576 ASVQM 580
+M
Sbjct: 708 LYEEM 712
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 167/372 (44%), Gaps = 42/372 (11%)
Query: 153 FLKHGRLEEATRLFEQMPRRNVISY---TAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+ GRL A ++ +Q+P ++ + +L G + ++ A+AL + +N +WT
Sbjct: 47 LVSSGRLAAARKVLDQVPEKSTLYLRFLNRILLGCSRSCDLSAAKALFSAAARRNAKTWT 106
Query: 210 VMITGYVKNERFCEARELFYRM-------PD--------------------------YDK 236
+M+ + R +A LF M PD +
Sbjct: 107 IMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNVPGCDVGTLHPVVTKLGFGA 166
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+V V ++ +CK G + AR +F + +D +++NAMI G ++ G EAL LF+ M
Sbjct: 167 SVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMR 226
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ + T S+ T + + L+ GRQ H L +R NV V NA++ YS+C +
Sbjct: 227 REGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLG 286
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D + F ++ + VS+N +I+A + + AL F M GFD + + SLLS G
Sbjct: 287 DLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAG 346
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV- 475
+ + ++ ++G+ L+D+ S+ G L+ A I +++D
Sbjct: 347 ALPHIKIGRQIHAQLI-LHGLTLEDFVGNALIDMYSKCGMLDAAKTI---FAYKSDKTAI 402
Query: 476 -WGSLLAACVIN 486
W +L+ CV N
Sbjct: 403 SWTALITGCVQN 414
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 190/644 (29%), Positives = 314/644 (48%), Gaps = 116/644 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------ 107
N IS + GK+S AR+LFD M + ++W +I GY Q+ +E+ L+ M
Sbjct: 78 NMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIE 137
Query: 108 ----------------PVKNIV------------SWNCMIAGCIDNDRIDD-----AFDY 134
KN++ +N M+ + + A
Sbjct: 138 PDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQL 197
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR---------------------- 172
F+ M ++T T+N++++G+ G EEA LF ++
Sbjct: 198 FKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDT 257
Query: 173 -----------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
NV A+LD + K +VD+ L M + +S+ V+IT Y
Sbjct: 258 KFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSY 317
Query: 216 VKNERFCEARELFYRM--PDYDKNVF---------------------------------- 239
N +F E+ +LF ++ +D+ F
Sbjct: 318 AWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFES 377
Query: 240 -VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
V A++ + K + A+ +F+ I K V + AMI+ Y Q G EE + +FS M +
Sbjct: 378 RVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ D AT S+ AC+ L ++ GRQ H L+IR+GF +NV +A++ Y++CG + D+
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+F ++ N VSWN +I+A+AQ+G+ + L F QM +G+ PD ++FLS+LSAC H
Sbjct: 498 IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHC 557
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E++ F M ++Y + P EHYT +VD+L R G+ ++A ++ MPFE +W S
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617
Query: 479 LLAACVINLNVELGELAAKKMREL-DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+L +C I+ N EL + AA ++ + D +++A Y+ +SN+YA AG W +V +V+ M+++G
Sbjct: 618 VLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRG 677
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
V K AYSW+EI ++ H F D SHP + KI ++ S +M+
Sbjct: 678 VRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEME 721
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 224/489 (45%), Gaps = 59/489 (12%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N +++ G + A Q+FDQM K+ I+ N +I+G+ + G L +++ LF M +
Sbjct: 46 SNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTA 105
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEA------ 162
VSW +I G + +++ +AF + M E + T ++SGF G LE
Sbjct: 106 VSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGF---GELETKNVIVQI 162
Query: 163 -TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
T + + N++ +++D + K + A L +M K+ V++ ++TGY
Sbjct: 163 HTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLN 222
Query: 222 CEARELFYRM-------------------------------------PDYDKNVFVVTAM 244
EA ELF + ++ NVFV A+
Sbjct: 223 EEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNAL 282
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM--IKMD-MQ 301
+ + K ++ LF + D +S+N +I YA NG +E+ LF + + D Q
Sbjct: 283 LDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQ 342
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
ATL+S+ T+ L++ GRQ H I G V NA++ MY++C G +++
Sbjct: 343 FPFATLLSIATSSLNLRM---GRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKI 399
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F I + V W +I+A+ Q G +E+ + FS M G D TF S+L AC + +
Sbjct: 400 FDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASI 459
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ L L+++ G + + + L+D ++ G + A + MP E ++ W +L++
Sbjct: 460 SLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALIS 517
Query: 482 ACVINLNVE 490
A N NV+
Sbjct: 518 AYAQNGNVD 526
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 154/309 (49%), Gaps = 37/309 (11%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
NT N ++ FL+ G L A ++F+QMP +N IS M+ G +K G++ KAR L D M
Sbjct: 42 NTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMV 101
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------------- 233
+ VSWT++I GY+++ + EA L+ M PD
Sbjct: 102 ERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQ 161
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
Y+ N+ V +++ +CK L A LF+ + KD V+FN+++ GY+ G+
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EEA+ LF + ++P D T ++ +A L G+Q H V++ F NV V NA
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNA 281
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ YS+ + + F ++ + +S+N +I ++A +G ++++ F ++ FD
Sbjct: 282 LLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341
Query: 405 GITFLSLLS 413
F +LLS
Sbjct: 342 QFPFATLLS 350
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 135/271 (49%), Gaps = 15/271 (5%)
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
N + +++ A ++F +MP KN + MI+G K G L AR LF+
Sbjct: 42 NTCRSNFQVNNFLERGDLVHAHQVFDQMPA--KNTISLNMMISGHLKFGKLSKARELFDG 99
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ + VS+ +I GY Q+ ++EA RL++ M + ++PD TLV++ + L+ N
Sbjct: 100 MVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVI 159
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
Q H VI+ G+E N+ VCN+++ Y + + + F+ + + + V++N+++ ++
Sbjct: 160 VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNE 219
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G E+A+ F ++ +G P TF +LLSA +D + +V+G + +
Sbjct: 220 GLNEEAIELFLELHNSGIKPSDFTFAALLSAA-------VGLDDTKFGQQVHGFVLKTNF 272
Query: 444 Y------TCLVDILSRAGQLEKAWQITQGMP 468
L+D S+ Q+++ ++ MP
Sbjct: 273 VWNVFVGNALLDYYSKHDQVDEVGKLFXEMP 303
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 257/424 (60%), Gaps = 6/424 (1%)
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALSDYMSFKNVVSWTVMITGYVKNE 219
++FE MP+R+++S+ ++ G + G + A R + + + + + ++ + +
Sbjct: 151 KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYV 210
Query: 220 RFCEARELF-YRMPD-YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ +E+ Y + + YD +VF+ +++I + K ++++ +F + D +S+N++IA
Sbjct: 211 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 270
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
G QNG+ +E L+ F M+ ++P+ + S+ AC+ L L+ G+Q H +IR+ F+
Sbjct: 271 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 330
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
NV + +A++ MY++CG I + F ++ ++VSW +I +A HGH A+ F +M
Sbjct: 331 NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME 390
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
+ G P+ + F+++L+AC HAG V+E+ F M + Y IIP EHY + D+L R G+L
Sbjct: 391 VEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRL 450
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
E+A++ M E VW +LLAAC ++ N+EL E +KK+ +DPQN YV+LSN+Y
Sbjct: 451 EEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIY 510
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
+AAG W+D ++R+ M+++G+ K+ A SWIEI NKVH F+ GD SHP D+I+ LK
Sbjct: 511 SAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLL 570
Query: 578 VQMK 581
QM+
Sbjct: 571 EQME 574
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 120/220 (54%), Gaps = 13/220 (5%)
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L + R +FE + +D VS+N +I+G AQNG+ E+AL + M D++PD TL SV
Sbjct: 146 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 205
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
+ L +G++ H IRNG++A+V + +++I MY++C + DS F + + +SW
Sbjct: 206 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 265
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N+IIA Q+G +++ L FF QM + P+ ++F S++ AC H + L +
Sbjct: 266 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAH-------LTTLHLGKQ 318
Query: 434 VYGIIPSSEH------YTCLVDILSRAGQLEKAWQITQGM 467
++G I S + LVD+ ++ G + A I M
Sbjct: 319 LHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKM 358
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 20/251 (7%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM- 138
DV +++I Y + + +S +F +P + +SWN +IAGC+ N D+ +FQ M
Sbjct: 230 DVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQML 289
Query: 139 ---PERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVD 191
+ N ++++++ L +L + R NV +A++D + K G +
Sbjct: 290 IAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIR 349
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFC 249
AR + D M ++VSWT MI GY + +A LF RM N A++T
Sbjct: 350 TARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS 409
Query: 250 KVGMLENARLLFE------RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
G+++ A F RI P + A+ + G EEA S M ++P
Sbjct: 410 HAGLVDEAWKYFNSMTQDYRIIP-GLEHYAAVADLLGRVGRLEEAYEFIS---DMHIEPT 465
Query: 304 DATLVSVFTAC 314
+ ++ AC
Sbjct: 466 GSVWSTLLAAC 476
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+ +A + ++ G I AR +FD+M D+++W A+I GY +G ++ +LF+ M V
Sbjct: 332 VFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEV 391
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
+ N V++ ++ C +D+A+ YF +M + Y A+ + GRLE
Sbjct: 392 EGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLE 451
Query: 161 EATRLFEQM---PRRNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVSWTVMITG 214
EA M P +V ++ +L ++ A +S + +N+ ++ ++
Sbjct: 452 EAYEFISDMHIEPTGSV--WSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNI 509
Query: 215 YVKNERFCEARELFYRMPD 233
Y R+ +AR+L M D
Sbjct: 510 YSAAGRWKDARKLRIAMRD 528
>gi|242080473|ref|XP_002445005.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
gi|241941355|gb|EES14500.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
Length = 679
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 295/534 (55%), Gaps = 43/534 (8%)
Query: 55 AKISALSRAGKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
A I+ L+RAG + A+ ++ +M + D + NA+I GY + G L + +F M +++
Sbjct: 139 AIITGLARAGMLREAQAVYWEMPPRWRDPVGSNAMIWGYLRGGELGMALRVFDGMAARDV 198
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
+SW+ M+ G + +A F+AMPERN ++ +MI G++KHG + LF M R
Sbjct: 199 ISWSAMVDGLCKYGTVSEARRLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRRE 258
Query: 173 ----NVISYTAMLDGFMKKGEVDK-----------------------------------A 193
N+I+ + +LDG + VD+ A
Sbjct: 259 GVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADA 318
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
R+L +M+ K++VSW +ITGYV+N+ +A LF MP+ K+ T+M+ GF G
Sbjct: 319 RSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHVLFKLMPE--KDAISWTSMVVGFANRGW 376
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ + LFE++ KD +++ A+++ NG A+R F M + +P+ + +A
Sbjct: 377 MRESVELFEQMPVKDEIAWAAVMSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSA 436
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
++L +LN+G Q+H + G+ + +V +++TMY++CG + ++ F I P+L++
Sbjct: 437 LASLAMLNQGLQAHAYAVNMGWIFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIAT 496
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N++I AFAQHG E A F++M +G P+ +TFL +L+AC AG V + FE M
Sbjct: 497 NSMITAFAQHGLAEDAFKLFNRMQYDGQRPNHVTFLGILTACARAGLVQHGYNYFESMRS 556
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
VYGI P+ +HYTC+VD+L RAG L +A ++T MP + W LL++ ++ N++L +
Sbjct: 557 VYGIQPNPDHYTCMVDLLGRAGFLNEALEMTNSMPQKDYPDAWKVLLSSSSLHSNLDLAK 616
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
LAA+++ E+DP ++ Y +LSN++++AGM D V++ +K YS I
Sbjct: 617 LAAQRLLEIDPYDATAYTVLSNMFSSAGMKEDEEMVKVAQLSNMASKSPGYSLI 670
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 202/380 (53%), Gaps = 39/380 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA +++ R G+I A+QLFD+M +DVI+W A++T Y G L ++ +F MP++N
Sbjct: 45 NALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNAA 104
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR-- 171
SWN +++ + R A F P +N +Y A+I+G + G L EA ++ +MP
Sbjct: 105 SWNALVSLYLRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAVYWEMPPRW 164
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
R+ + AM+ G+++ GE+ A + D M+ ++V+SW+ M+ G K EAR LF M
Sbjct: 165 RDPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEARRLFEAM 224
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P ++NV T+MI G+ K GM + LLF ++ ++ V N
Sbjct: 225 P--ERNVVSWTSMIRGYVKHGMYRDGLLLFLDMR-REGVQVN------------------ 263
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
MI + + V C+ L++EG Q H L+IR GF ++ + +++I MYSR
Sbjct: 264 ---MITLSV---------VLDGCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSR 311
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G + D+ F ++ ++VSWN++I + Q+ E A + F M + D I++ S+
Sbjct: 312 FGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHVLFKLMP----EKDAISWTSM 367
Query: 412 LSACGHAGKVNESMDLFELM 431
+ + G + ES++LFE M
Sbjct: 368 VVGFANRGWMRESVELFEQM 387
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 168/370 (45%), Gaps = 47/370 (12%)
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+A+P R A NA+++ + + GR+++A +LF++MP R+VIS+TA+L + G + AR
Sbjct: 36 RALPNR--AHLNALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARF 93
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
+ D M +N SW +++ Y++ R A LF + P KN A+ITG + GML
Sbjct: 94 VFDDMPLRNAASWNALVSLYLRAGRPAAAHALFCKAP--AKNAVSYGAIITGLARAGMLR 151
Query: 256 NARLLFERIQP--KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
A+ ++ + P +D V NAMI GY + G ALR+F GM D
Sbjct: 152 EAQAVYWEMPPRWRDPVGSNAMIWGYLRGGELGMALRVFDGMAARD-------------- 197
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
V +A++ + G + ++ F + N+VSW
Sbjct: 198 -------------------------VISWSAMVDGLCKYGTVSEARRLFEAMPERNVVSW 232
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
++I + +HG Y L+ F M G + IT +L C A V+E + LM++
Sbjct: 233 TSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIR 292
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+ G L+ + SR G + A + M + D W SL+ V N +E
Sbjct: 293 M-GFAEDIFLGDSLIIMYSRFGSMADARSLFSFMN-QKDIVSWNSLITGYVQNDMIEDAH 350
Query: 494 LAAKKMRELD 503
+ K M E D
Sbjct: 351 VLFKLMPEKD 360
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 144/280 (51%), Gaps = 18/280 (6%)
Query: 39 NCL-IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+CL IR+ + +F+ ++ I SR G ++ AR LF M KD+++WN++ITGY QN +
Sbjct: 287 HCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMI 346
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
+++ LF+ MP K+ +SW M+ G + + ++ + F+ MP ++ + A++S + +G
Sbjct: 347 EDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAVMSSLVANG 406
Query: 158 RLEEATRLFEQMP----RRNVISYTAMLDGF-----MKKGEVDKARALSDYMSFKNVVSW 208
A R F QM R N ++++ +L + +G A A++ F + V
Sbjct: 407 NYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAVH- 465
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI---- 264
++T Y K R EA +F + ++ +MIT F + G+ E+A LF R+
Sbjct: 466 ASLVTMYAKCGRLAEAHRVFSCIS--HPSLIATNSMITAFAQHGLAEDAFKLFNRMQYDG 523
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPD 303
Q + V+F ++ A+ G+ + F M + +QP+
Sbjct: 524 QRPNHVTFLGILTACARAGLVQHGYNYFESMRSVYGIQPN 563
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 107/250 (42%), Gaps = 23/250 (9%)
Query: 38 SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
++ L +L + + + + G + + +LF+QM KD I W A+++ NG
Sbjct: 349 AHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAVMSSLVANGNY 408
Query: 98 QESKNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAM 149
+ F M + N V+++C+++ ++ ++A + ++
Sbjct: 409 VSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAVHASL 468
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF----KNV 205
++ + K GRL EA R+F + ++I+ +M+ F + G + A L + M + N
Sbjct: 469 VTMYAKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLFNRMQYDGQRPNH 528
Query: 206 VSWTVMIT-----GYVKN--ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
V++ ++T G V++ F R ++ P+ D T M+ + G L A
Sbjct: 529 VTFLGILTACARAGLVQHGYNYFESMRSVYGIQPNPDH----YTCMVDLLGRAGFLNEAL 584
Query: 259 LLFERIQPKD 268
+ + KD
Sbjct: 585 EMTNSMPQKD 594
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 146/352 (41%), Positives = 222/352 (63%), Gaps = 2/352 (0%)
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
MP+ K++ +TAMIT + K GM++ AR+LF+ ++ +D + +N MI GYAQ+G+ E L
Sbjct: 1 MPE--KSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLL 58
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
LF M+ ++P++ T+++V +AC L GR H + NG NV V ++I MYS
Sbjct: 59 LFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYS 118
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG + D+ L F +I + ++V+WN+++ +A HG + AL F +M + G+ P ITF+
Sbjct: 119 KCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIG 178
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+L+AC HAG V+E F M YGI P EHY C+V++L RAG LE+A+++ + M +
Sbjct: 179 VLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEID 238
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
D +WG+LL AC ++ N+ LGE A+ + + NS YV+LSN+YAAAG W V RVR
Sbjct: 239 QDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVR 298
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
LMKE G K+ S IE+ NKVH FL GD+ HP +I+ L+ + +K+
Sbjct: 299 TLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKT 350
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 175/417 (41%), Gaps = 80/417 (19%)
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
MP K++VS MI ID+A F + ER+ +N MI G+ +HG E LF
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 167 EQM----PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
QM R N ++ A+L + G ++ R + Y+ +
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGI----------------- 103
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
NV V T++I + K G LE+ARL+FERI KD V++N+M+ GYA +
Sbjct: 104 ------------GINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMH 151
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G +++ALRLF M + QP D T + V ACS L++EG +
Sbjct: 152 GFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWK----------------- 194
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
YS + E P + + ++ + G+ E+A M + D
Sbjct: 195 ----FFYS-----MKDEYGIE----PKVEHYGCMVNLLGRAGYLEEAYELVKNMEI---D 238
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
D + + +LL AC G + + E +V + +S Y L +I + AG E +
Sbjct: 239 QDPVLWGTLLGACRLHGNIALGEQIAEYLVSQN--LANSGTYVLLSNIYAAAGNWEGVAR 296
Query: 463 ITQGMP---FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
+ M FE + G I +N ++ E A +R P++ +Y ML +
Sbjct: 297 VRTLMKESGFEKEPG-------CSSIEVNNKVHEFLAGDLRH--PKSREIYEMLEEI 344
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 82/168 (48%), Gaps = 10/168 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V + I S+ G + AR +F++++ KDV+ WN+++ GY +GF Q++ LF+ M +
Sbjct: 107 VRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCM 166
Query: 110 ----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLE 160
+++ ++ C + + + +F +M E Y M++ + G LE
Sbjct: 167 IGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLE 226
Query: 161 EATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
EA L + M ++ + + +L G + +++Y+ +N+ +
Sbjct: 227 EAYELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLAN 274
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 17/227 (7%)
Query: 55 AKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---PVK- 110
A I+ ++ G I AR LFD + +D I WN +I GY Q+G E LF+ M V+
Sbjct: 11 AMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRP 70
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN-----AMISGFLKHGRLEEATRL 165
N V+ +++ C ++ + + E N N ++I + K G LE+A +
Sbjct: 71 NEVTVLAVLSACGQTGALETG-RWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK----NERF 221
FE++ ++V+++ +M+ G+ G A L M + G +
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLV 189
Query: 222 CEARELFYRMPD---YDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
E + FY M D + V M+ + G LE A L + ++
Sbjct: 190 SEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNME 236
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 271/448 (60%), Gaps = 6/448 (1%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T T N +++ + K G +E A +LF++MP R+++S+ M+ + G+ +KA L M
Sbjct: 81 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 140
Query: 202 FKNVVSWTVMITGYVKN--ERFC--EAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLE 255
+ ++ V + C E ++L F D NVFV TA++ + K G+++
Sbjct: 141 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 200
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A L+FE + + V++++M+AGY QN + EEAL LF M ++ + T+ S +AC+
Sbjct: 201 DANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACA 260
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
A L EG+Q + + G +N+ V +++I MY++CG I ++ F + N+V WN
Sbjct: 261 ARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNA 320
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
I++ F++H +A+I+F +M G P+ IT++S+LSAC H G V + F+LM++V+
Sbjct: 321 ILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVH 380
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
+ P+ HY+C+VDIL RAG L +A MPF+A +WGSLLA+C I N+EL E+A
Sbjct: 381 NVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVA 440
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
AK + E++P N+ +V+LSN+YAA W +V R R L+KE K+ SWIEI +KVH
Sbjct: 441 AKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHS 500
Query: 556 FLGGDMSHPCIDKIHLELKRASVQMKSV 583
F+ G+ +HP I +I+L+L+ +MK +
Sbjct: 501 FMVGERNHPRIVEIYLKLEDLVGEMKKI 528
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 186/408 (45%), Gaps = 87/408 (21%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D IT N ++ Y + G ++ ++ LF MPV+++VSWN M+ N + A F M
Sbjct: 81 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 140
Query: 140 ERNTA----TYNAMISGFLKHGRLEEATRL----FEQMPRRNVISYTAMLDGFMKKGEVD 191
+ T+ T ++++ + E +L + NV TA+LD + K G V
Sbjct: 141 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 200
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------------------- 231
A + + M ++ V+W+ M+ GYV+NE + EA LF+R
Sbjct: 201 DANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACA 260
Query: 232 -----------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
N+FV++++I + K G++E A +F ++ K+ V +NA
Sbjct: 261 ARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNA 320
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+++G++++ + EA+ F M +M + P+D T +SV +ACS L L+ +GR+ L+IR
Sbjct: 321 ILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIR-- 378
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIAAFAQHGHYEKALIF 392
+H SPN++ ++ ++ + G +A F
Sbjct: 379 ------------------------------VHNVSPNVLHYSCMVDILGRAGLLHEAKDF 408
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-VYGIIP 439
+M FD + SLL++C ++ +++L E+ K ++ I P
Sbjct: 409 IDRM---PFDATASMWGSLLASC----RIYRNLELAEVAAKHLFEIEP 449
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
EG H +IR G A+ N ++ MYS+CG + + F ++ +LVSWNT++ +
Sbjct: 65 EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 124
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
Q+G EKAL+ F QM G T S++ AC V E L +K + +
Sbjct: 125 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKT-ALDSNV 183
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
T L+D+ ++ G ++ A + + MP +D W S++A V N
Sbjct: 184 FVGTALLDVYAKCGLVKDANLVFECMPERSDV-TWSSMVAGYVQN 227
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 56/294 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF---QS 106
VFV A + ++ G + A +F+ M + +TW++++ GY QN +E+ LF Q+
Sbjct: 183 VFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQA 242
Query: 107 MPV-----------------------KNIVSWNC---------MIAGCIDN----DRIDD 130
M + K + + +C +I+ ID I++
Sbjct: 243 MGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEE 302
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMK 186
A+ F ++ E+N +NA++SGF +H R EA FE+M + N I+Y ++L
Sbjct: 303 AYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSH 362
Query: 187 KGEVDKARALSDYM-----SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
G V+K R D M NV+ ++ M+ + EA++ RMP +D +
Sbjct: 363 LGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMP-FDATASMW 421
Query: 242 TAMITGFCKVGM-LE----NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+++ C++ LE A+ LFE I+P + + + YA N EE R
Sbjct: 422 GSLLAS-CRIYRNLELAEVAAKHLFE-IEPHNAGNHVLLSNIYAANDRWEEVAR 473
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 190/636 (29%), Positives = 295/636 (46%), Gaps = 116/636 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N + A S+ +ARQ+FD++ K V +W ++ G +NGF ++ + F + +IV
Sbjct: 102 NQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIV 161
Query: 114 ----SWNCMIAGCIDND-----------------------------------RIDDAFDY 134
+ + I CI D RI D+
Sbjct: 162 PDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKV 221
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEA----TRLFEQMPRRNVISYTAMLDGFMKKGEV 190
F ++ RN ++NAMISGF+ +G EA R+ + R NV + ++ + G+V
Sbjct: 222 FNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDV 281
Query: 191 DKAR-------------------ALSDYMSFKNVVS------------------WTVMIT 213
+K R AL D + V+ W MI+
Sbjct: 282 EKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMIS 341
Query: 214 GYVKNERFCEARELFYRMP------------------------DYDKN------------ 237
G+ + EA LF RM +Y K
Sbjct: 342 GFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSIG 401
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
V + A++ + K G L+ R LF+ + + +S+ ++ Y+Q+ E+AL +FS M +
Sbjct: 402 VSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMRE 461
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
M QP+ T V +C++L L G+Q H L + GF + V + +I MY++CG + D
Sbjct: 462 MGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRD 521
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F + P+++SW +I+ +AQHG + AL F +M L +P+ TFL LL AC H
Sbjct: 522 AIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSH 581
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
G V+E + F LM + YG++P EHY C+VDIL R G+L +AW+ MP E D VW
Sbjct: 582 GGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWS 641
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+LL AC ++ N++L ++AA+K+ +P + A V+LSN Y AG VR +MK Q
Sbjct: 642 TLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMMKSQA 701
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
+ K+ SWI IG K+H F GD HP D I+ L
Sbjct: 702 MRKETGMSWICIGGKIHKFCSGDQYHPQKDDIYKTL 737
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 128/559 (22%), Positives = 238/559 (42%), Gaps = 65/559 (11%)
Query: 33 FTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYW 92
T + NC S + +A L +A I F + + N ++ Y
Sbjct: 50 LTVNDGNCCYSETSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYS 109
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF------QAMPERNTAT- 145
+ ++ +F +P K++ SW ++ G +N D DYF +P+ +
Sbjct: 110 KCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSA 169
Query: 146 -------YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD 198
++++ G + H ++ TR F N T++L + K G + + + +
Sbjct: 170 AIQACIGVDSIVVGEMVHAQV--ITRGFSSRTFVN----TSLLGMYAKLGRIGDSCKVFN 223
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRM----------------------PDYDK 236
+ +N VSW MI+G+V N + EA F RM D +K
Sbjct: 224 SLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEK 283
Query: 237 ---------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDC---VSFNAMIAG 278
N+ V TA+I F K G + + +F C + +NAMI+G
Sbjct: 284 GRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVS-NFSGCGVNLPWNAMISG 342
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
+ +G EEA+ LF M + +++ D T S + + ++ L +Q H ++ ++G
Sbjct: 343 FTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-SIG 401
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
VS+CNA++ Y++CG + F N +SW T++ A++Q +E AL FSQM
Sbjct: 402 VSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMRE 461
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
GF P+ +TF +L++C + + L K G + L+D+ ++ G +
Sbjct: 462 MGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKT-GFARDKCVESVLIDMYAKCGSVR 520
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ-NSAVYVMLSNLY 517
A ++ + + + D W ++++ + + +KM + P NSA ++ L
Sbjct: 521 DAIKVFESLK-DPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFAC 579
Query: 518 AAAGMWRDVTRVRLLMKEQ 536
+ G+ + R LM+E+
Sbjct: 580 SHGGLVDEGLRYFHLMEER 598
>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/452 (34%), Positives = 258/452 (57%), Gaps = 8/452 (1%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RA 195
E N +A++ + K + +A R+F+ M + + +S+T+++ GF K G +A +
Sbjct: 1348 EDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKE 1407
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP---DYDKNVFVVTAMITGFCKVG 252
+ N V++ I+ E + L + + FVV+ +I + K G
Sbjct: 1408 MLGSQIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCG 1467
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
++ A LLF +D + FN+MI+GY+QN EEAL+LF M + P D TL S+
Sbjct: 1468 RIDQAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILN 1527
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
AC +L +L +GRQ H LV + G E+NV V +A++ MYS+CG I ++ F Q N V
Sbjct: 1528 ACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVL 1587
Query: 373 WNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
W ++I +AQ G + L F ++ GF PD I F ++L+AC HAG +++ +D F M
Sbjct: 1588 WTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQM 1647
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
+ YG++P + Y CLVD+ R G L KA ++ + P E ++ +WGS L++C + EL
Sbjct: 1648 RRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAEL 1707
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
G AA K+ +++P ++A YV ++++YA AG+W +V +R LMK++G+ K +SW+E+
Sbjct: 1708 GREAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDK 1767
Query: 552 KVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+VH F D SHP I +EL+R +++MK V
Sbjct: 1768 RVHVFXVADASHPRSRDICVELERLNLEMKEV 1799
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 137/250 (54%), Gaps = 3/250 (1%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ N+F+ +A++ + K + +A+ +F+ ++ D VS+ ++I+G+++NG +EA+ F
Sbjct: 1347 FEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFK 1406
Query: 294 GMIKMDMQPDDATLVSVFTACSALQ-LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M+ ++P+ T VS +AC+ L+ + ++ H V++ GF V + +I YS+C
Sbjct: 1407 EMLGSQIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKC 1466
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I + L F + + +N++I+ ++Q+ E+AL F ZM NG P T S+L
Sbjct: 1467 GRIDQAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSIL 1526
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
+ACG + + + L+ K+ G + + L+D+ S+ G +++A + E +
Sbjct: 1527 NACGSLTILQQGRQVHSLVAKM-GSESNVFVVSALLDMYSKCGSIDEA-RCVFXQAVEKN 1584
Query: 473 TGVWGSLLAA 482
T +W S++
Sbjct: 1585 TVLWTSMITG 1594
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
A++ EAL F M +P L + +C+ L G Q H +I+ GFE N+
Sbjct: 1292 AKHANVREALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL 1351
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
+ +A++ +Y++C I+D++ F + + VSW +II+ F+++G ++A++FF +M +
Sbjct: 1352 FLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 1411
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
P+ +T++S +SAC + + L V G + +CL+D S+ G++++
Sbjct: 1412 QIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQ 1471
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVE 490
A + G E D ++ S+++ NL E
Sbjct: 1472 A-VLLFGTTIERDNILFNSMISGYSQNLXGE 1501
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 142/368 (38%), Gaps = 98/368 (26%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES----KNLFQ 105
+F+N+A + ++ I A+++FD M D ++W +II+G+ +NG +E+ K +
Sbjct: 1351 LFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLG 1410
Query: 106 SMPVKNIVSWNCMIAGCIDND------------------------------------RID 129
S N V++ I+ C + RID
Sbjct: 1411 SQIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRID 1470
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM-------------------- 169
A F ER+ +N+MISG+ ++ EEA +LF ZM
Sbjct: 1471 QAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACG 1530
Query: 170 -------------------PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
NV +A+LD + K G +D+AR + KN V WT
Sbjct: 1531 SLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTS 1590
Query: 211 MITGYVKNERFCEARELFYRM-------PDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
MITGY ++ R E LF R+ PD+ TA++T G L+ F +
Sbjct: 1591 MITGYAQSGRGPEGLGLFERLVXEEGFTPDH----ICFTAVLTACNHAGFLDKGIDYFNQ 1646
Query: 264 IQPK-----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
++ D + ++ Y +NG +A L M +P+ S ++C
Sbjct: 1647 MRRDYGLVPDLDQYACLVDLYVRNGHLRKAKEL---MEAXPXEPNSVMWGSFLSSCKLYG 1703
Query: 319 LLNEGRQS 326
GR++
Sbjct: 1704 EAELGREA 1711
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 16 LFPPILRILSTPDSCGNFT-----PHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAAR 70
L P + S ++CG+ T + + ++ S VFV +A + S+ G I AR
Sbjct: 1515 LXPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEAR 1574
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK-----NIVSWNCMIAGCIDN 125
+F Q K+ + W ++ITGY Q+G E LF+ + + + + + ++ C
Sbjct: 1575 CVFXQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHA 1634
Query: 126 DRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMPRR-NVISYTA 179
+D DYF M + Y ++ ++++G L +A L E P N + + +
Sbjct: 1635 GFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGS 1694
Query: 180 MLDGFMKKGEVDKARALSDYM 200
L GE + R +D +
Sbjct: 1695 FLSSCKLYGEAELGREAADKL 1715
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 195/651 (29%), Positives = 306/651 (47%), Gaps = 123/651 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMT---TKDVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
N+ IS S++G + A +F+ M +DV++W+A++ Y NG ++ +F
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 109 --VKNIVSWNCMIAGCIDNDRI-------------------------------------D 129
V N + +I C ++D + +
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF----------EQMPRRNVISYTA 179
+A+ F M E N T+ MI+ ++ G EA R F ++ +V S A
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 180 ---------------------------MLDGFMK---KGEVDKARALSDYMSFKNVVSWT 209
++D + K G VD R + D M +V+SWT
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 210 VMITGYVKNERFC-EARELFYRM-------------------------PDYDKNVF---- 239
+ITGY+KN EA LF M P K V
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 240 ---------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
V ++I+ F K +E+A+ FE + K+ VS+N + G +N E+A +
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
L S + + ++ T S+ + + + + +G Q H V++ G N VCNA+I+MYS
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG I + F + + N++SW ++I FA+HG + L F+QM G P+ +T+++
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+LSAC H G V+E F M + + I P EHY C+VD+L RAG L A++ MPF+
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
AD VW + L AC ++ N ELG+LAA+K+ ELDP A Y+ LSN+YA AG W + T +R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
MKE+ + K+ SWIE+G+K+H F GD +HP +I+ EL R ++K
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 175/367 (47%), Gaps = 20/367 (5%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPR---RNVISYTAMLDGFMKKG-EVDKARA 195
E ++ YN++IS + K G +A +FE M R R+V+S++AM+ + G E+D +
Sbjct: 94 EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 196 LSDYMSF---KNVVSWTVMITGYVKNERFCEAR---ELFYRMPDYDKNVFVVTAMITGFC 249
+++ N +T +I ++ R + ++ +V V ++I F
Sbjct: 154 FVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 250 K-VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K ENA +F+++ + V++ MI Q G EA+R F M+ + D TL
Sbjct: 214 KGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC---GGILDSELAFRQI 365
SVF+AC+ L+ L+ G+Q H IR+G +V +++ MY++C G + D F ++
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 366 HSPNLVSWNTIIAAFAQHGHY-EKALIFFSQMGLNG-FDPDGITFLSLLSACGHAGKVNE 423
+++SW +I + ++ + +A+ FS+M G +P+ TF S ACG+
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ K G+ +S ++ + ++ ++E A + + + E + + + L
Sbjct: 392 GKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGT 449
Query: 484 VINLNVE 490
NLN E
Sbjct: 450 CRNLNFE 456
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 143/294 (48%), Gaps = 14/294 (4%)
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFE- 262
V+++ ++ ++ F + + R+ ++D + + ++I+ + K G A +FE
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 263 --RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
R +D VS++AM+A Y NG +A+++F +++ + P+D +V ACS +
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFV 182
Query: 321 NEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSEL-AFRQIHSPNLVSWNTIIA 378
GR + +++ G FE++V V ++I M+ + ++ F ++ N+V+W +I
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
Q G +A+ FF M L+GF+ D T S+ SAC ++ L ++ G++
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIR-SGLV 301
Query: 439 PSSEHYTCLVDILSRA---GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
E LVD+ ++ G ++ ++ M + W +L+ + N N+
Sbjct: 302 DDVE--CSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITGYMKNCNL 352
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF----LQESKNLFQSM 107
V NA IS S+ G I A ++F+ M ++VI+W ++ITG+ ++GF L+ + +
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
N V++ +++ C + + + +F +M E + Y M+ + G L +A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 163 TRLFEQMP 170
MP
Sbjct: 631 FEFINTMP 638
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 271/448 (60%), Gaps = 6/448 (1%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T T N +++ + K G +E A +LF++MP R+++S+ M+ + G+ +KA L M
Sbjct: 54 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 113
Query: 202 FKNVVSWTVMITGYVKN--ERFC--EAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLE 255
+ ++ V + C E ++L F D NVFV TA++ + K G+++
Sbjct: 114 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 173
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A L+FE + + V++++M+AGY QN + EEAL LF M ++ + T+ S +AC+
Sbjct: 174 DANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACA 233
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
A L EG+Q + + G +N+ V +++I MY++CG I ++ F + N+V WN
Sbjct: 234 ARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNA 293
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
I++ F++H +A+I+F +M G P+ IT++S+LSAC H G V + F+LM++V+
Sbjct: 294 ILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVH 353
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
+ P+ HY+C+VDIL RAG L +A MPF+A +WGSLLA+C I N+EL E+A
Sbjct: 354 NVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVA 413
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
AK + E++P N+ +V+LSN+YAA W +V R R L+KE K+ SWIEI +KVH
Sbjct: 414 AKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHS 473
Query: 556 FLGGDMSHPCIDKIHLELKRASVQMKSV 583
F+ G+ +HP I +I+L+L+ +MK +
Sbjct: 474 FMVGERNHPRIVEIYLKLEDLVGEMKKI 501
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 186/408 (45%), Gaps = 87/408 (21%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D IT N ++ Y + G ++ ++ LF MPV+++VSWN M+ N + A F M
Sbjct: 54 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 113
Query: 140 ERNTA----TYNAMISGFLKHGRLEEATRL----FEQMPRRNVISYTAMLDGFMKKGEVD 191
+ T+ T ++++ + E +L + NV TA+LD + K G V
Sbjct: 114 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 173
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------------------- 231
A + + M ++ V+W+ M+ GYV+NE + EA LF+R
Sbjct: 174 DANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACA 233
Query: 232 -----------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
N+FV++++I + K G++E A +F ++ K+ V +NA
Sbjct: 234 ARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNA 293
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+++G++++ + EA+ F M +M + P+D T +SV +ACS L L+ +GR+ L+IR
Sbjct: 294 ILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIR-- 351
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIAAFAQHGHYEKALIF 392
+H SPN++ ++ ++ + G +A F
Sbjct: 352 ------------------------------VHNVSPNVLHYSCMVDILGRAGLLHEAKDF 381
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-VYGIIP 439
+M FD + SLL++C ++ +++L E+ K ++ I P
Sbjct: 382 IDRM---PFDATASMWGSLLASC----RIYRNLELAEVAAKHLFEIEP 422
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
EG H +IR G A+ N ++ MYS+CG + + F ++ +LVSWNT++ +
Sbjct: 38 EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 97
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
Q+G EKAL+ F QM G T S++ AC V E L +K + +
Sbjct: 98 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKT-ALDSNV 156
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
T L+D+ ++ G ++ A + + MP +D W S++A V N
Sbjct: 157 FVGTALLDVYAKCGLVKDANLVFECMPERSDV-TWSSMVAGYVQN 200
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 56/294 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF---QS 106
VFV A + ++ G + A +F+ M + +TW++++ GY QN +E+ LF Q+
Sbjct: 156 VFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQA 215
Query: 107 MPV-----------------------KNIVSWNC---------MIAGCIDN----DRIDD 130
M + K + + +C +I+ ID I++
Sbjct: 216 MGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEE 275
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMK 186
A+ F ++ E+N +NA++SGF +H R EA FE+M + N I+Y ++L
Sbjct: 276 AYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSH 335
Query: 187 KGEVDKARALSDYM-----SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
G V+K R D M NV+ ++ M+ + EA++ RMP +D +
Sbjct: 336 LGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMP-FDATASMW 394
Query: 242 TAMITGFCKVGM-LE----NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+++ C++ LE A+ LFE I+P + + + YA N EE R
Sbjct: 395 GSLLAS-CRIYRNLELAEVAAKHLFE-IEPHNAGNHVLLSNIYAANDRWEEVAR 446
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 195/651 (29%), Positives = 306/651 (47%), Gaps = 123/651 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMT---TKDVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
N+ IS S++G + A +F+ M +DV++W+A++ Y NG ++ +F
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 109 --VKNIVSWNCMIAGCIDNDRI-------------------------------------D 129
V N + +I C ++D + +
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF----------EQMPRRNVISYTA 179
+A+ F M E N T+ MI+ ++ G EA R F ++ +V S A
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 180 ---------------------------MLDGFMK---KGEVDKARALSDYMSFKNVVSWT 209
++D + K G VD R + D M +V+SWT
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 210 VMITGYVKNERFC-EARELFYRM-------------------------PDYDKNVF---- 239
+ITGY+KN EA LF M P K V
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 240 ---------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
V ++I+ F K +E+A+ FE + K+ VS+N + G +N E+A +
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
L S + + ++ T S+ + + + + +G Q H V++ G N VCNA+I+MYS
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG I + F + + N++SW ++I FA+HG + L F+QM G P+ +T+++
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+LSAC H G V+E F M + + I P EHY C+VD+L RAG L A++ MPF+
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
AD VW + L AC ++ N ELG+LAA+K+ ELDP A Y+ LSN+YA AG W + T +R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
MKE+ + K+ SWIE+G+K+H F GD +HP +I+ EL R ++K
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 175/367 (47%), Gaps = 20/367 (5%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPR---RNVISYTAMLDGFMKKG-EVDKARA 195
E ++ YN++IS + K G +A +FE M R R+V+S++AM+ + G E+D +
Sbjct: 94 EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 196 LSDYMSF---KNVVSWTVMITGYVKNERFCEAR---ELFYRMPDYDKNVFVVTAMITGFC 249
+++ N +T +I ++ R + ++ +V V ++I F
Sbjct: 154 FVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 250 K-VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K ENA +F+++ + V++ MI Q G EA+R F M+ + D TL
Sbjct: 214 KGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC---GGILDSELAFRQI 365
SVF+AC+ L+ L+ G+Q H IR+G +V +++ MY++C G + D F ++
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 366 HSPNLVSWNTIIAAFAQHGHY-EKALIFFSQMGLNG-FDPDGITFLSLLSACGHAGKVNE 423
+++SW +I + ++ + +A+ FS+M G +P+ TF S ACG+
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ K G+ +S ++ + ++ ++E A + + + E + + + L
Sbjct: 392 GKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGT 449
Query: 484 VINLNVE 490
NLN E
Sbjct: 450 CRNLNFE 456
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 113/219 (51%), Gaps = 7/219 (3%)
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFE- 262
V+++ ++ ++ F + + R+ ++D + + ++I+ + K G A +FE
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 263 --RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
R +D VS++AM+A Y NG +A+++F +++ + P+D +V ACS +
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFV 182
Query: 321 NEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSEL-AFRQIHSPNLVSWNTIIA 378
GR + +++ G FE++V V ++I M+ + ++ F ++ N+V+W +I
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
Q G +A+ FF M L+GF+ D T S+ SAC
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF----LQESKNLFQSM 107
V NA IS S+ G I A ++F+ M ++VI+W ++ITG+ ++GF L+ + +
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
N V++ +++ C + + + +F +M E + Y M+ + G L +A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 163 TRLFEQMP 170
MP
Sbjct: 631 FEFINTMP 638
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 160/416 (38%), Positives = 249/416 (59%), Gaps = 5/416 (1%)
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
F M ERN ++N+M++G+LK G L A R+F+++P+++VIS+ +M+ G+ + G+++KA
Sbjct: 166 FDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKAL 225
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
+L M +N SW MI+GYV+ AR F MP +N MI+G+ K G +
Sbjct: 226 SLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMPQ--RNNVSWMTMISGYSKCGDV 283
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM--QPDDATLVSVFT 312
++A LF+++ KD + FNAMIA YAQN +EAL+LF+ M+ D+ QPD+ TL SV +
Sbjct: 284 DSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVIS 343
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
ACS L L G + R G E + + A++ +Y++CG I + F + +LV+
Sbjct: 344 ACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVA 403
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
+ +I +G A+ F +M P+ ITF+ LL+A HAG V E F M
Sbjct: 404 YTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMK 463
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
K Y ++PS +HY +VD+ RAG+L++A ++ + MP + GVWG+LL AC ++ NVE G
Sbjct: 464 K-YNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFG 522
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
E+AA+ EL+P + +LSN+YA+ W DV R+R + KE+G +K SW+E
Sbjct: 523 EIAAQHCFELEPDTTGYCSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 201/404 (49%), Gaps = 42/404 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V A + + G + AR++FD+M ++V++WN+++ GY ++G L ++ +F +P
Sbjct: 143 IYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQ 202
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K+++SWN MI+G ++ A FQ MPERN A++NAMISG+++ G ++ A F+ M
Sbjct: 203 KDVISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAM 262
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P+RN +S+ M+ G+ K G+VD A L D + K+++ + MI Y +N R EA +LF
Sbjct: 263 PQRNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFN 322
Query: 230 RMPDYDKNV---------------------------------------FVVTAMITGFCK 250
M + D NV + TA++ + K
Sbjct: 323 NMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAK 382
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G ++ A LF ++ KD V++ AMI G NG A +A++LF M+ + P+ T + +
Sbjct: 383 CGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGL 442
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPN 369
TA + L+ EG + + +V ++ ++ R G + ++ EL P+
Sbjct: 443 LTAYNHAGLVEEGYHCFTSMKKYNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPH 502
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
W ++ A H + E I + +PD + SLLS
Sbjct: 503 AGVWGALLLACRLHNNVEFGEI--AAQHCFELEPDTTGYCSLLS 544
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ D S+ I Q+G +EA L+ M + + P L S AC+ + G
Sbjct: 66 KSPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGL 125
Query: 325 QSHVLVIRNGFEA---NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
H V + GF + V A++ Y + G + + F ++ N+VSWN+++A +
Sbjct: 126 SIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 185
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ G A F ++ D I++ S++S AG + +++ LF+ M
Sbjct: 186 KSGDLVVAQRVFDEIP----QKDVISWNSMISGYARAGDMEKALSLFQQM 231
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 9/180 (5%)
Query: 310 VFTACSALQL-LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-- 366
+F+ S + L + + +Q H L++ +G + I + + ++ +H
Sbjct: 6 LFSKLSTISLSVKQAKQVHALILIHGLSHLEPILARQILLSASNYSATVAQYVHSVLHHS 65
Query: 367 -SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
SP+ SW I QHG +++A + QM G P S L AC +
Sbjct: 66 KSPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGL 125
Query: 426 DLFELMVKVYGIIPSSEHY---TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ V+ +G + T LVD + G +E A ++ M E + W S+LA
Sbjct: 126 SIHG-QVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMA-ERNVVSWNSMLAG 183
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/479 (32%), Positives = 272/479 (56%), Gaps = 39/479 (8%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
NT + L GR+ A + + + R +++ +L+ + K G +++AR + + M
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHA-HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------------- 233
++ V+WT +I+GY +++R C+A F +M P+
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+D NV V +A++ + + G++++A+L+F+ ++ ++ VS+NA+IAG+A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
E+AL LF GM++ +P + S+F ACS+ L +G+ H +I++G + N
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ MY++ G I D+ F ++ ++VSWN+++ A+AQHG ++A+ +F +M G P+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
I+FLS+L+AC H+G ++E +ELM K GI+P + HY +VD+L RAG L +A +
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
+ MP E +W +LL AC ++ N ELG AA+ + ELDP + +V+L N+YA+ G W
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
D RVR MKE GV K+ A SW+EI N +H F+ D HP ++I + + ++K +
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKEL 540
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 172/390 (44%), Gaps = 55/390 (14%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G+I A + + D++ N ++ Y + G L+E++ +F+ MP ++ V+W +I+G
Sbjct: 79 GRIVHA-HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP--------RRNVI 175
+DR DA +F M + +S +K E Q+ NV
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF------- 228
+A+LD + + G +D A+ + D + +N VSW +I G+ + +A ELF
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 229 -----------------------------YRMPDYDKNV-FVVTAMITGFCKVGMLENAR 258
Y + +K V F ++ + K G + +AR
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F+R+ +D VS+N+++ YAQ+G +EA+ F M ++ ++P++ + +SV TACS
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH----SPNLVSWN 374
LL+EG + L+ ++G V+ + R G D A R I P W
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG---DLNRALRFIEEMPIEPTAAIWK 434
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ A H + E L ++ + DPD
Sbjct: 435 ALLNACRMHKNTE--LGAYAAEHVFELDPD 462
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
F N + +++G I AR++FD++ +DV++WN+++T Y Q+GF +E+ F+ M
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 109 --VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT----YNAMISGFLKHGRLEEA 162
N +S+ ++ C + +D+ + Y++ M + Y ++ + G L A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 163 TRLFEQMP 170
R E+MP
Sbjct: 418 LRFIEEMP 425
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 114/272 (41%), Gaps = 34/272 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V +A + +R G + A+ +FD + +++ ++WNA+I G+ + +++ LFQ M
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM-- 253
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS-GFLKHGRLEEATRLFEQ 168
D F+ + + A S GFL+ G+ A + +
Sbjct: 254 ---------------------LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY-MIKS 291
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
+ + +LD + K G + AR + D ++ ++VVSW ++T Y ++ EA F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 229 YRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS----FNAMIAGYAQN 282
M N +++T G+L+ +E ++ V + ++ +
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
G ALR +M ++P A ++ AC
Sbjct: 412 GDLNRALRFIE---EMPIEPTAAIWKALLNAC 440
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 303/578 (52%), Gaps = 71/578 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V A I +R G + AAR++F+ + + V+ W +IT Y Q G ++ LF M
Sbjct: 183 VSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM-- 240
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
++D F E + T ++M+S + G +L +
Sbjct: 241 ------------------LEDGF-------EPDGYTMSSMVSACAEQGSAGLGQQLHSLV 275
Query: 170 PRRNVISYT----AMLDGFMK---KGEVDKARALSDYMSFKNVVSWTVMITGYVK-NERF 221
R ++S T ++D + K + ++ AR + M NV+SWT +I+GYV+ +
Sbjct: 276 LRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQE 335
Query: 222 CEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC----VSFNAM 275
A EL M + N ++++ + ++ R + R+ V NA+
Sbjct: 336 NNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNAL 395
Query: 276 IAGYAQNGVAEEALRLF--------------------------SGMIKMDMQPDDATLVS 309
++ YA++G EEA + F S + MD+ T S
Sbjct: 396 VSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFAS 455
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP- 368
+ +A + + L +G+Q H L I+ GFE++ + N++++MYSRCG + D+ AF ++
Sbjct: 456 LLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDH 515
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
N++SW +II+A A+HGH E+AL F M L+G P+ +T++++LSAC H G V E + F
Sbjct: 516 NVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYF 575
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
M K + +IP EHY C+VD+L+R+G +++A + MP +AD VW +LL AC N
Sbjct: 576 RSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYEN 635
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
+E+GE+AA+ + +L+PQ+ A YV+LSNLYA G+W +V R+R LM+ + ++K+ SW+
Sbjct: 636 IEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMH 695
Query: 549 IGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDF 586
+GN +H F GD SHP +I+ +L +V ++ + D
Sbjct: 696 VGNTIHEFRAGDTSHPRAQEIYAKL---AVLIREIKDI 730
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 129/256 (50%), Gaps = 8/256 (3%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQP-KDCVSFNAMIAGYAQNGVAEEALRLFS 293
D + V +++T + K G + AR +F+ ++ +D VS+ AM +NG +EAL L
Sbjct: 76 DADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLG 135
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLL-NEGRQSHVLVIRNGF-EANVSVCNAVITMYSR 351
M++ ++P+ TL + AC +L + G I+ GF +VSV A+I M++R
Sbjct: 136 EMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFAR 195
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G ++ + F + +V W +I + Q G KA+ F M +GF+PDG T S+
Sbjct: 196 NGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSM 255
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR---AGQLEKAWQITQGMP 468
+SAC G L L++++ G++ + LVD+ ++ +E A ++ + MP
Sbjct: 256 VSACAEQGSAGLGQQLHSLVLRL-GLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMP 314
Query: 469 FEADTGVWGSLLAACV 484
+ W +L++ V
Sbjct: 315 TH-NVMSWTALISGYV 329
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 294/544 (54%), Gaps = 59/544 (10%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----E 140
N ++ Y + G L SK L S +++V+WN +++ N+++ +A +Y + M E
Sbjct: 153 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 212
Query: 141 RNTATYNAMISG-----FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+ T ++++ L+ G+ A L N +A++D + +V R
Sbjct: 213 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 272
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD---------------------- 233
+ D M + + W MI GY +NE EA LF M +
Sbjct: 273 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 332
Query: 234 ----------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
D++ FV ++ + ++G ++ A +F +++ +D V++N MI
Sbjct: 333 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 392
Query: 278 GYAQNGVAEEALRLF-----------SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
GY + E+AL L G ++ ++P+ TL+++ +C+AL L +G++
Sbjct: 393 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 452
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H I+N +V+V +A++ MY++CG + S F QI N+++WN II A+ HG+
Sbjct: 453 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 512
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++A+ M + G P+ +TF+S+ +AC H+G V+E + +F +M YG+ PSS+HY C
Sbjct: 513 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 572
Query: 447 LVDILSRAGQLEKAWQITQGMPFEAD-TGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
+VD+L RAG++++A+Q+ MP + + G W SLL A I+ N+E+GE+AA+ + +L+P
Sbjct: 573 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 632
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
++ YV+L+N+Y++AG+W T VR MKEQGV K+ SWIE G++VH F+ GD SHP
Sbjct: 633 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 692
Query: 566 IDKI 569
+K+
Sbjct: 693 SEKL 696
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 171/379 (45%), Gaps = 29/379 (7%)
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
+ F + ERN ++N++IS + E A F M NV
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV----------------- 108
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF-YRMPDYDKNVFVVTAMITGFCK 250
+ SF +VS + E +++ Y + + N F++ ++ + K
Sbjct: 109 ------EPSSF-TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGK 161
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+G L ++++L +D V++N +++ QN EAL M+ ++PD+ T+ SV
Sbjct: 162 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 221
Query: 311 FTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
ACS L++L G++ H ++NG + N V +A++ MY C +L F +
Sbjct: 222 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 281
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSACGHAGKVNESMDLF 428
+ WN +IA ++Q+ H ++AL+ F M + G + T ++ AC +G + +
Sbjct: 282 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 341
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
+VK G+ L+D+ SR G+++ A +I M + D W +++ V + +
Sbjct: 342 GFVVK-RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEH 399
Query: 489 VELGELAAKKMRELDPQNS 507
E L KM+ L+ + S
Sbjct: 400 HEDALLLLHKMQNLERKVS 418
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 5/249 (2%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+V V ++ + K G +F+RI ++ VS+N++I+ E AL F M+
Sbjct: 45 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 104
Query: 297 KMDMQPDDATLVSVFTACSALQL---LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
+++P TLVSV TACS L + L G+Q H +R G E N + N ++ MY + G
Sbjct: 105 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 163
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ S++ +LV+WNT++++ Q+ +AL + +M L G +PD T S+L
Sbjct: 164 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 223
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H + +L +K + +S + LVD+ Q+ ++ GM F+
Sbjct: 224 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKI 282
Query: 474 GVWGSLLAA 482
G+W +++A
Sbjct: 283 GLWNAMIAG 291
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 108/523 (20%), Positives = 229/523 (43%), Gaps = 38/523 (7%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+ V V N ++ + G A ++FD+++ ++ ++WN++I+ + + F
Sbjct: 41 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 100
Query: 105 QSMPVKNI----VSWNCMIAGCIDNDRID------DAFDYFQAMPERNTATYNAMISGFL 154
+ M +N+ + ++ C + + Y E N+ N +++ +
Sbjct: 101 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYG 160
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
K G+L + L R+++++ +L + ++ +A M + V I+
Sbjct: 161 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 220
Query: 215 YVKN----ERFCEARELF-YRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ E +EL Y + + D+N FV +A++ +C + + R +F+ + +
Sbjct: 221 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 280
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQS 326
+NAMIAGY+QN +EAL LF GM + + + T+ V AC +
Sbjct: 281 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 340
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H V++ G + + V N ++ MYSR G I + F ++ +LV+WNT+I + H+
Sbjct: 341 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 400
Query: 387 EKALIFFSQM-----------GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
E AL+ +M P+ IT +++L +C + + ++ +K
Sbjct: 401 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-N 459
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
+ + LVD+ ++ G L+ + ++ +P + + W ++ A ++ N G+ A
Sbjct: 460 NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQEA 515
Query: 496 AKKMRELDPQ----NSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+R + Q N ++ + + +GM + R+ +MK
Sbjct: 516 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 558
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRAGKISAAR 70
L P + +++ SC + + I ++ + V V +A + ++ G + +R
Sbjct: 426 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 485
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDND 126
++FDQ+ K+VITWN II Y +G QE+ +L + M V+ N V++ + A C +
Sbjct: 486 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 545
Query: 127 RIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
+D+ F M E ++ Y ++ + GR++EA +L MPR
Sbjct: 546 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 595
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN-VSVCNAVITMYSRCG 353
MI + ++PD+ ++ A + LQ + G+Q H V + G+ + V+V N ++ +Y +CG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
F +I N VSWN++I++ +E AL F M +P T +S+++
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 414 AC 415
AC
Sbjct: 121 AC 122
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 190/644 (29%), Positives = 314/644 (48%), Gaps = 116/644 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------ 107
N IS + GK+S AR+LFD M + ++W +I GY Q+ +E+ L+ M
Sbjct: 78 NMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIE 137
Query: 108 ----------------PVKNIV------------SWNCMIAGCIDNDRIDD-----AFDY 134
KN++ +N M+ + + A
Sbjct: 138 PDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQL 197
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR---------------------- 172
F+ M ++T T+N++++G+ G EEA LF ++
Sbjct: 198 FKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDT 257
Query: 173 -----------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
NV A+LD + K +VD+ L M + +S+ V+IT Y
Sbjct: 258 KFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSY 317
Query: 216 VKNERFCEARELFYRM--PDYDKNVF---------------------------------- 239
N +F E+ +LF ++ +D+ F
Sbjct: 318 AWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFES 377
Query: 240 -VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
V A++ + K + A+ +F+ I K V + AMI+ Y Q G EE + +FS M +
Sbjct: 378 RVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ D AT S+ AC+ L ++ GRQ H L+IR+GF +NV +A++ Y++CG + D+
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+F ++ N VSWN +I+A+AQ+G+ + L F QM +G+ PD ++FLS+LSAC H
Sbjct: 498 IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHC 557
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V E++ F M ++Y + P EHYT +VD+L R G+ ++A ++ MPFE +W S
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617
Query: 479 LLAACVINLNVELGELAAKKMREL-DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+L +C I+ N EL + AA ++ + D +++A Y+ +SN+YA AG W +V +V+ M+++G
Sbjct: 618 VLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRG 677
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
V K AYSW+EI ++ H F D SHP + KI ++ S +M+
Sbjct: 678 VRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEME 721
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 224/489 (45%), Gaps = 59/489 (12%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N +++ G + A Q+FDQM K+ I+ N +I+G+ + G L +++ LF M +
Sbjct: 46 SNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTA 105
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEA------ 162
VSW +I G + +++ +AF + M E + T ++SGF G LE
Sbjct: 106 VSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGF---GELETKNVIVQI 162
Query: 163 -TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
T + + N++ +++D + K + A L +M K+ V++ ++TGY
Sbjct: 163 HTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLN 222
Query: 222 CEARELFYRM-------------------------------------PDYDKNVFVVTAM 244
EA ELF + ++ NVFV A+
Sbjct: 223 EEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNAL 282
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM--IKMD-MQ 301
+ + K ++ LF + D +S+N +I YA NG +E+ LF + + D Q
Sbjct: 283 LDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQ 342
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
ATL+S+ T+ L++ GRQ H I G V NA++ MY++C G +++
Sbjct: 343 FPFATLLSIATSSLNLRM---GRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKI 399
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F I + V W +I+A+ Q G +E+ + FS M G D TF S+L AC + +
Sbjct: 400 FDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASI 459
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ L L+++ G + + + L+D ++ G + A + MP E ++ W +L++
Sbjct: 460 SLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALIS 517
Query: 482 ACVINLNVE 490
A N NV+
Sbjct: 518 AYAQNGNVD 526
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 154/309 (49%), Gaps = 37/309 (11%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
NT N ++ FL+ G L A ++F+QMP +N IS M+ G +K G++ KAR L D M
Sbjct: 42 NTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMV 101
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------------- 233
+ VSWT++I GY+++ + EA L+ M PD
Sbjct: 102 ERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQ 161
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
Y+ N+ V +++ +CK L A LF+ + KD V+FN+++ GY+ G+
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EEA+ LF + ++P D T ++ +A L G+Q H V++ F NV V NA
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNA 281
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ YS+ + + F ++ + +S+N +I ++A +G ++++ F ++ FD
Sbjct: 282 LLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341
Query: 405 GITFLSLLS 413
F +LLS
Sbjct: 342 QFPFATLLS 350
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 185/627 (29%), Positives = 312/627 (49%), Gaps = 82/627 (13%)
Query: 29 SCGNFTPHSSNCLIRLFSTQYVFVNNAKISA-----LSRAGKISAARQLFDQMTTKDVIT 83
SCG H + T++ F + ++ R G + A + F Q+ V
Sbjct: 171 SCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFC 230
Query: 84 WNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-- 141
N+++ GY ++ + + LF+SMP +++VSWN M++ + R +A M R
Sbjct: 231 RNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGV 290
Query: 142 --NTATYNAMISGFLKHGRLEEATRLFEQ----MPRRNVISYTAMLDGFMKKGEVDKARA 195
++ TY + ++ K L +L Q +P + +AM++ + K G +AR
Sbjct: 291 RLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARR 350
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------------------ 231
+ + +N VSWTV+I G+++ F E+ ELF +M
Sbjct: 351 VFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMD 410
Query: 232 -------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS------- 271
+ + V + ++I+ + K G L+NA +F ++ +D VS
Sbjct: 411 MCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTA 470
Query: 272 ------------------------FNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDAT 306
+NAM+ Y Q+G E+ L+++S M+ + D+ PD T
Sbjct: 471 YSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVT 530
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
V++F C+ + G Q ++ G + SV NAVITMYS+CG I ++ F +
Sbjct: 531 YVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLS 590
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+LVSWN +I ++QHG ++A+ F M G PD I+++++LS+C H+G V E
Sbjct: 591 RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKF 650
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
F+++ + + + P EH++C+VD+L+RAG L +A + MP + VWG+LL+AC +
Sbjct: 651 YFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTH 710
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
N EL ELAAK + +LD +S Y++L+ +YA AG D +VR LM+++G+ K YSW
Sbjct: 711 GNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSW 770
Query: 547 IEIGNKVHYFLGGDMSHPCIDKIHLEL 573
+E+ NKVH F D+SHP + I +L
Sbjct: 771 MEVKNKVHVFKAEDVSHPQVIAIREKL 797
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 213/495 (43%), Gaps = 86/495 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLF-DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
VF+ N + A G + AR L +T +VIT N ++ GY + G L +++ LF MP
Sbjct: 63 VFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMP 122
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG---------------- 152
+++ SWN +++G + R DA + F +M + NA G
Sbjct: 123 RRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVAL 182
Query: 153 ------------------------FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
F++ G ++ A++ F Q+ R V +ML G+ K
Sbjct: 183 QLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSY 242
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA------------------------ 224
VD A L + M ++VVSW +M++ ++ R EA
Sbjct: 243 GVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLT 302
Query: 225 ---------------RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
++ +P D +V +AM+ + K G + AR +F ++ ++
Sbjct: 303 ACAKLSSLGWGKQLHAQVIRSLPCIDP--YVASAMVELYAKCGCFKEARRVFSSLRDRNT 360
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+ +I G+ Q G E+L LF+ M M D L ++ + CS + RQ H L
Sbjct: 361 VSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSL 420
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+++G V + N++I+MY++CG + ++E F + ++VSW ++ A++Q G+ KA
Sbjct: 421 SLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKA 480
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
FF M IT+ ++L A G + + ++ M+ +IP Y L
Sbjct: 481 REFFDGMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFR 536
Query: 450 ILSRAGQLEKAWQIT 464
+ G + QIT
Sbjct: 537 GCADMGANKLGDQIT 551
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 161/379 (42%), Gaps = 52/379 (13%)
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
++ Y+ +AR L R + NV M+ G+ K+G L +A LF R+ +D
Sbjct: 68 TLLHAYLSCGALPDARGLL-RGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDV 126
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSHV 328
S+N +++GY Q+G +A+ F M + D P+ T +C AL Q
Sbjct: 127 TSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLG 186
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
L+ + GF+ + V ++ M+ RCG + + F QI P + N+++A +A+ +
Sbjct: 187 LLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDH 246
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL F M + D +++ ++SA +G+ E++ + V
Sbjct: 247 ALELFESMP----ERDVVSWNMMVSALSQSGRAREALSV-------------------AV 283
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG-ELAAKKMRELDPQNS 507
D+ +R +L D+ + S L AC ++ G +L A+ +R L +
Sbjct: 284 DMHNRGVRL--------------DSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDP 329
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
V + LYA G +++ RV ++++ SW +GG + + C
Sbjct: 330 YVASAMVELYAKCGCFKEARRVFSSLRDRNTV-----SWT-------VLIGGFLQYGCFS 377
Query: 568 KIHLELKRASVQMKSVDDF 586
+ + ++ +VD F
Sbjct: 378 ESLELFNQMRAELMTVDQF 396
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 73/187 (39%), Gaps = 34/187 (18%)
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR-QI 365
L +C A L R H ++ G + V + N ++ Y CG + D+ R I
Sbjct: 31 LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDI 90
Query: 366 HSPNLV-------------------------------SWNTIIAAFAQHGHYEKALIFFS 394
PN++ SWNT+++ + Q G + A+ F
Sbjct: 91 TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFV 150
Query: 395 QMGLNGFD-PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
M +G P+ TF + +CG G ++ L L+ K +G + T +VD+ R
Sbjct: 151 SMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTK-FGFQGDPDVATGIVDMFVR 209
Query: 454 AGQLEKA 460
G ++ A
Sbjct: 210 CGAVDFA 216
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 168/564 (29%), Positives = 304/564 (53%), Gaps = 46/564 (8%)
Query: 35 PHS--------SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNA 86
PHS + CL + + FV+N+ I R G + AR+ FD++ KD + W
Sbjct: 119 PHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTM 178
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY 146
+I+G + G L +++ L PV++++SW +IA +R +A F+ M
Sbjct: 179 LISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTM-------- 230
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
L HG + ++ A+L K +++ R+L + K +
Sbjct: 231 -------LSHGIAPDE------------VTVIAVLSACAKLKDLELGRSLHLLVEEKGMP 271
Query: 207 S----WTVMITGYVKNERFCEARELF---YRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
+ +I Y K F A+++F R P A+I G+CK G ++ AR
Sbjct: 272 TSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQS----WNAIIDGYCKHGHVDVARS 327
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LF+ ++ +D ++FN+M+ GY +G EAL LF M + D++ D+ T+V++ TAC++L
Sbjct: 328 LFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGA 387
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L +GR H + + EA++ + A++ MY +CG + ++ + F+++ ++ +W +IA
Sbjct: 388 LQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAG 447
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
A +G + AL F QM +GF P+ ++++++L+AC H+ +NE F+ M +Y I P
Sbjct: 448 LAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHP 507
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
EHY C++D+L R+G L++A + + MP + + +W S+L+AC ++ +++L + AA+ +
Sbjct: 508 QIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHL 567
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
+L+P VYV L N+Y + W + +++R+LM+E+ V K YS I + +VH F+
Sbjct: 568 LKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVS 627
Query: 560 DMSHPCIDKIHLELKRASVQMKSV 583
D SHP I +I L+ S ++KS+
Sbjct: 628 DKSHPRILEIIAMLEEISHRLKSL 651
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 182/638 (28%), Positives = 303/638 (47%), Gaps = 122/638 (19%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----- 107
N IS + G +S+AR LFD M + V+TW ++ Y +N E+ LF+ M
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 108 -PVKNIVSWNCMIAGCIDN-------------------------------------DRID 129
+ + V++ ++ GC D R+D
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR------------------ 171
A F+ +PE+++ T+N +I+G+ K G E+ LF +M +
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 172 ---------------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
R+ +LD + K V + R L D M + VS+ V
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321
Query: 211 MITGYVKNERFCEARELFYR--------------------------------------MP 232
+I+ Y + +++ EA F+R +
Sbjct: 322 VISSYSQADQY-EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
D + V +++ + K M E A L+F+ + + VS+ A+I+GY Q G+ L+LF
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ M +++ D +T +V A ++ L G+Q H +IR+G NV + ++ MY++C
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC 500
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I D+ F ++ N VSWN +I+A A +G E A+ F++M +G PD ++ L +L
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVL 560
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
+AC H G V + + F+ M +YGI P +HY C++D+L R G+ +A ++ MPFE D
Sbjct: 561 TACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD 620
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDP-QNSAVYVMLSNLYAAAGMWRDVTRVRL 531
+W S+L AC I+ N L E AA+K+ ++ +++A YV +SN+YAAAG W V V+
Sbjct: 621 EIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKK 680
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
M+E+G+ K AYSW+E+ +K+H F D +HP D+I
Sbjct: 681 AMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEI 718
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 187/388 (48%), Gaps = 47/388 (12%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+ +T N ++ L+ G++ A +++++MP +N +S M+ G +K G+V AR L D
Sbjct: 45 DTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDA 104
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRM--------PD------------------ 233
M + VV+WT+++ Y +N F EA +LF +M PD
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 234 -------------YDKNVFVVTA--MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+D N F+ + ++ +C+V L+ A +LFE I KD V+FN +I G
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
Y ++G+ E++ LF M + QP D T V A L G+Q H L + GF +
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
SV N ++ YS+ +L++ + F ++ + VS+N +I++++Q YE +L FF +M
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLF--ELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
GFD F ++LS + + L L+ I+ LVD+ ++
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG---NSLVDMYAKCEM 401
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACV 484
E+A I + +P + T W +L++ V
Sbjct: 402 FEEAELIFKSLP-QRTTVSWTALISGYV 428
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 235/517 (45%), Gaps = 67/517 (12%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N + L R G++SAAR+++D+M K+ ++ N +I+G+ + G + +++LF +MP + +
Sbjct: 51 SNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTV 110
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAM--------PERNTATY------------------ 146
V+W ++ N D+AF F+ M P+ T T
Sbjct: 111 VTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVH 170
Query: 147 -----------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
N ++ + + RL+ A LFE++P ++ +++ ++ G+ K G
Sbjct: 171 AFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGL 230
Query: 190 VDKARAL-----------SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV 238
++ L SD+ +F V+ V + + ++ + ++
Sbjct: 231 YTESIHLFLKMRQSGHQPSDF-TFSGVLKAVVGLHDFALGQQL----HALSVTTGFSRDA 285
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
V ++ + K + R+LF+ + D VS+N +I+ Y+Q E +L F M M
Sbjct: 286 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 345
Query: 299 DMQPDD---ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ AT++S+ S+LQ+ GRQ H + ++ + V N+++ MY++C
Sbjct: 346 GFDRRNFPFATMLSIAANLSSLQM---GRQLHCQALLATADSILHVGNSLVDMYAKCEMF 402
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++EL F+ + VSW +I+ + Q G + L F++M + D TF ++L A
Sbjct: 403 EEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKAS 462
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ L +++ G + + + LVD+ ++ G ++ A Q+ + MP + +
Sbjct: 463 ASFASLLLGKQLHAFIIR-SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVS 520
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
W +L++A N + E A KM E Q +V ++
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 109/272 (40%), Gaps = 33/272 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V N+ + ++ A +F + + ++W A+I+GY Q G LF M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
N+ + A + + +A++ +++ G H + + L
Sbjct: 446 SNLRADQSTFATVL-----------------KASASFASLLLGKQLHAFIIRSGNL---- 484
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
NV S + ++D + K G + A + + M +N VSW +I+ + N A F
Sbjct: 485 --ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 230 RMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----FNAMIAGYAQN 282
+M + + + ++T G +E F+ + P ++ + M+ +N
Sbjct: 543 KMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRN 602
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
G EA +L M +M +PD+ SV AC
Sbjct: 603 GRFAEAEKL---MDEMPFEPDEIMWSSVLNAC 631
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR + + VF + + ++ G I A Q+F++M ++ ++WNA+I+ + NG + +
Sbjct: 478 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAM 149
F M + VS ++ C ++ +YFQAM P++ Y M
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK--HYACM 595
Query: 150 ISGFLKHGRLEEATRLFEQMP 170
+ ++GR EA +L ++MP
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMP 616
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 259/440 (58%), Gaps = 8/440 (1%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM----SFKNVVSWTVMITG 214
L +A R+ ++MP RNV+S+TAM+ G+ ++G +A L M + N ++ ++T
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
Query: 215 YVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ F R++ + ++ ++FV ++++ + K G + AR +F+ + +D VS
Sbjct: 121 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSC 180
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
A+I+GYAQ G+ EEAL LF + + M+ + T SV TA S L L+ GRQ H V+R
Sbjct: 181 TAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR 240
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
V + N++I MYS+CG + S F + ++SWN ++ +++HG +A+
Sbjct: 241 AKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVEL 300
Query: 393 FSQMGL-NGFDPDGITFLSLLSACGHAGKVNESMDLF-ELMVKVYGIIPSSEHYTCLVDI 450
F M N PD +TFL++LS C H G + +++F E++ + G P EHY C+VD+
Sbjct: 301 FKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDL 360
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
RAG++E+A++ + MPFE +WGSLL AC ++ NV +GE A+++ E++ +N+ Y
Sbjct: 361 FGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNY 420
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V+LSNLYA+AG W DV VR LMKE+ V K+ SWIE+ +H F D SHP +++
Sbjct: 421 VILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVF 480
Query: 571 LELKRASVQMKSVDDFVEIA 590
+++ S+++K E++
Sbjct: 481 AKVRELSIKIKEAGYVPELS 500
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 135/253 (53%), Gaps = 10/253 (3%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y+ V++ T +I + K L +AR + + + ++ VS+ AMI+GY+Q G A EAL LF
Sbjct: 41 YEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFV 100
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ P++ T +V T+C++ GRQ H LVI+ FE+++ V ++++ MY++ G
Sbjct: 101 EMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAG 160
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ F + ++VS II+ +AQ G E+AL F ++ G + +T+ S+L+
Sbjct: 161 KICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLT 220
Query: 414 ACGHAGKVNESMDLFELMVKV----YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
A ++ + +++ Y ++ +S L+D+ S+ G L + +I MP
Sbjct: 221 ALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS-----LIDMYSKCGSLTYSRRIFDSMP- 274
Query: 470 EADTGVWGSLLAA 482
E W ++L
Sbjct: 275 ERTVISWNAMLVG 287
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 180/356 (50%), Gaps = 26/356 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V++ I ++ + AR++ D+M ++V++W A+I+GY Q G+ E+ +LF M
Sbjct: 45 VYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLM 104
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLEE 161
N ++ ++ C + + + + ++ ++++ + K G++ E
Sbjct: 105 SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICE 164
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDYMSFKNVVSWTVM 211
A R+F+ +P R+V+S TA++ G+ + G ++A L S+Y+++ +V++
Sbjct: 165 ARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSG 224
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ + + R + L ++P Y V + ++I + K G L +R +F+ + + +S
Sbjct: 225 LAA-LDHGRQVHSHVLRAKLPFY---VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVIS 280
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+NAM+ GY+++G+ EA+ LF M + + ++PD T ++V + CS + + G + +
Sbjct: 281 WNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEM 340
Query: 331 I--RNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
+ ++GFE + V+ ++ R G + ++ E + P W +++ A H
Sbjct: 341 VNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 396
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 47/290 (16%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
++FV ++ + ++AGKI AR++FD + +DV++ AII+GY Q G +E+ +LF+ +
Sbjct: 145 HIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQ 204
Query: 109 VK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLE 160
+ N V++ ++ +D + Y N++I + K G L
Sbjct: 205 REGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLT 264
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ R+F+ MP R VIS+ AML G+ K G +A L M +N V
Sbjct: 265 YSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK------------- 311
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL--LFERIQPKDCVS-----FN 273
PD A+++G C G +E+ L +E + KD +
Sbjct: 312 -----------PD----SVTFLAVLSG-CSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG 355
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++ + + G EEA F + KM +P A S+ AC Q ++ G
Sbjct: 356 CVVDLFGRAGRVEEA---FEFIKKMPFEPTAAIWGSLLGACRVHQNVHIG 402
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 107/218 (49%), Gaps = 11/218 (5%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
SV T C + + EG++ H +I+ +E V + +I +Y++C + D+ ++
Sbjct: 15 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
N+VSW +I+ ++Q G+ +AL F +M ++G P+ TF ++L++C + +
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134
Query: 429 ELMVKVYGIIPSSEHY----TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
L++K S E + + L+D+ ++AG++ +A ++ G+P +
Sbjct: 135 SLVIKT-----SFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 189
Query: 485 INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ L+ E +L + RE N Y S L A +G+
Sbjct: 190 LGLDEEALDLFRRLQREGMRSNYVTYA--SVLTALSGL 225
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 190/602 (31%), Positives = 311/602 (51%), Gaps = 23/602 (3%)
Query: 1 MLCNSYFHQTYLKRILFPPIL---RILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKI 57
++ H Y K ++ P CG+ H++ L VF N I
Sbjct: 25 LITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSL--HNAQTSFHLTQYPNVFSYNTLI 82
Query: 58 SALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----V 113
+A ++ I AR++FD++ D++++N +I Y G + LF+ + +
Sbjct: 83 NAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGF 142
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERN--TATYNAMISGFLKHGRLEEATRLFEQMPR 171
+ + +I C D+ + F + + + NA+++ + + G L EA R+F +M
Sbjct: 143 TLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGE 202
Query: 172 ---RNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNERFCEA 224
R+ +S+ AM+ + E +A L M + ++ + ++T + +
Sbjct: 203 GGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGG 262
Query: 225 RELFYRM--PDYDKNVFVVTAMITGFCK-VGMLENARLLFERIQPKDCVSFNAMIAGYA- 280
R+ M + N V + +I + K G + R +FE I D V +N MI+G++
Sbjct: 263 RQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSL 322
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN-V 339
++E+ L F M + +PDD + V V +ACS L + G+Q H L I++ N V
Sbjct: 323 YEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRV 382
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
SV NA++ MYS+CG + D+ F + N VS N++IA +AQHG ++L F M
Sbjct: 383 SVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEK 442
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
P+ ITF+++LSAC H GKV E F +M + + I P +EHY+C++D+L RAG+L++
Sbjct: 443 DIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKE 502
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
A +I + MPF + W +LL AC + NVEL AA + L+P N+A YVMLSN+YA+
Sbjct: 503 AERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYAS 562
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQ 579
A W + V+ LM+E+GV K+ SWIEI KVH F+ D SHP I +IH+ + + +
Sbjct: 563 AARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKK 622
Query: 580 MK 581
MK
Sbjct: 623 MK 624
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T ++ AC A + L G+ H L ++ + + N +YS+CG + +++ +F
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
PN+ S+NT+I A+A+H A F ++ PD +++ +L++A G+ ++
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHIARRVFDEIP----QPDIVSYNTLIAAYADRGECGPTL 126
Query: 426 DLFE 429
LFE
Sbjct: 127 RLFE 130
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 149/458 (32%), Positives = 257/458 (56%), Gaps = 33/458 (7%)
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDG 183
ID F+ MP ++ +YN +I+G+ + G E+A R+ +M + + + +++L
Sbjct: 156 IDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPI 215
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTA 243
F + +V K + + Y+ K + D +V++ ++
Sbjct: 216 FSEYVDVLKGKEIHGYVIRKGI-----------------------------DSDVYIGSS 246
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
++ + K +E++ +F + +D +S+N+++AGY QNG EALRLF M+ ++P
Sbjct: 247 LVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPG 306
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
SV AC+ L L+ G+Q H V+R GF N+ + +A++ MYS+CG I + F
Sbjct: 307 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFD 366
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+++ + VSW II A HGH +A+ F +M G P+ + F+++L+AC H G V+E
Sbjct: 367 RMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 426
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ F M KVYG+ EHY + D+L RAG+LE+A+ M E VW +LL++C
Sbjct: 427 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSC 486
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
++ N+EL E A+K+ +D +N YV++ N+YA+ G W+++ ++RL ++++G+ K+ A
Sbjct: 487 SVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPA 546
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
SWIE+ NK H F+ GD SHP +D+I+ LK QM+
Sbjct: 547 CSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQME 584
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 171/330 (51%), Gaps = 12/330 (3%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK--------NVVSWTV 210
L EA +F+ + V+++ +++ F + +RAL+ ++ + NV +
Sbjct: 55 LHEALLVFKTLESPPVLAWKSVIRCFTDQSLF--SRALASFVEMRASGRCPDHNVFPSVL 112
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ + RF E+ F D +++ A++ + K+ +++ R +FE + KD V
Sbjct: 113 KSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVV 172
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+N +IAGYAQ+G+ E+ALR+ M D++PD TL SV S + +G++ H V
Sbjct: 173 SYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYV 232
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
IR G +++V + ++++ MY++ I DSE F ++ + +SWN+++A + Q+G Y +AL
Sbjct: 233 IRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEAL 292
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F QM P + F S++ AC H ++ L +++ G + + LVD+
Sbjct: 293 RLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLR-GGFGRNIFIASALVDM 351
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
S+ G ++ A +I M D W +++
Sbjct: 352 YSKCGNIQAARKIFDRMNLH-DEVSWTAII 380
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+I+ + + +L A L+F+ ++ +++ ++I + + AL F M PD
Sbjct: 45 VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPD 104
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
SV +C+ + L G H ++R G + ++ NA++ MYS+ GI F
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFE 164
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
+ ++VS+NT+IA +AQ G YE AL +MG + PD T S+L V +
Sbjct: 165 LMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLK 224
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
++ +++ GI + LVD+ +++ ++E + ++ + + D+ W SL+A
Sbjct: 225 GKEIHGYVIR-KGIDSDVYIGSSLVDMYAKSARIEDSERVFSHL-YRRDSISWNSLVAGY 282
Query: 484 VIN 486
V N
Sbjct: 283 VQN 285
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 175/433 (40%), Gaps = 110/433 (25%)
Query: 16 LFPPILRILSTPDSCG-----NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAAR 70
+FP +L+ SC F ++RL ++ NA ++ S+ I + R
Sbjct: 107 VFPSVLK------SCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVR 160
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----------------PV----- 109
++F+ M KDV+++N +I GY Q+G +++ + + M P+
Sbjct: 161 KVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYV 220
Query: 110 -----KNIVSWNCMIAGCIDND---------------RIDDAFDYFQAMPERNTATYNAM 149
K I + +I ID+D RI+D+ F + R++ ++N++
Sbjct: 221 DVLKGKEIHGY--VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSL 278
Query: 150 ISGFLKHGRLEEATRLFEQMPR-------------------------------------- 171
++G++++GR EA RLF QM
Sbjct: 279 VAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 338
Query: 172 -RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
RN+ +A++D + K G + AR + D M+ + VSWT +I G+ + EA LF
Sbjct: 339 GRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEE 398
Query: 231 MP--DYDKNVFVVTAMITGFCKVGMLENARLLFERIQP-----KDCVSFNAMIAGYAQNG 283
M N A++T VG+++ A F + ++ + A+ + G
Sbjct: 399 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 458
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSA---LQLLNEGRQSHVLVIRNGFEANVS 340
EEA S KM ++P + ++ ++CS L+L + + + A V
Sbjct: 459 KLEEAYDFIS---KMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVL 515
Query: 341 VCNAVITMYSRCG 353
+CN MY+ G
Sbjct: 516 MCN----MYASNG 524
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ +A + S+ G I AAR++FD+M D ++W AII G+ +G E+ +LF+ M
Sbjct: 342 IFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 401
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPE-----RNTATYNAMISGFLKHGRLE 160
+ N V++ ++ C +D+A+ YF +M + + Y A+ + G+LE
Sbjct: 402 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 461
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK-------NVVSWTVMIT 213
EA +M V ++ + V K L++ ++ K N+ ++ +M
Sbjct: 462 EAYDFISKM---RVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCN 518
Query: 214 GYVKNERFCEARELFYRM 231
Y N R+ E +L R+
Sbjct: 519 MYASNGRWKEMAKLRLRV 536
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 294/553 (53%), Gaps = 45/553 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
FV NA I ++ + ++FD+M ++ +TWN+II+ Q G ++ LF M
Sbjct: 210 TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 269
Query: 110 K------NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH-----GR 158
+ ++ ++ C N R D+ A R T N ++ L H GR
Sbjct: 270 SEDGIQPDQFTFTTLLTLCA-NQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGR 328
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITG 214
L A +F +M RN S+ +M++G+ + GE +A L M + S + M++
Sbjct: 329 LNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSS 388
Query: 215 YVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD--CV 270
V + REL F ++ + ++ + K G ++ A ++++ KD
Sbjct: 389 CVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTA 448
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+N+++AGYA G+ +E+ F M++ D++ D T+V++ ++LV
Sbjct: 449 LWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV---------------NLLV 493
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+ A++ MYS+CG I + F ++ N+VSWN +I+ +++HG ++AL
Sbjct: 494 LET----------ALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEAL 543
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
I + +M G P+ +TFL++LSAC H G V E + +F M + Y I +EHYTC+VD+
Sbjct: 544 ILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDL 603
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L RAG+LE A + + MP E + WG+LL AC ++ ++++G LAA+++ ELDPQN Y
Sbjct: 604 LGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPY 663
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V++SN+YAAAG W++V +R +MK +GV K SWIEI +++ F G +HP ++I+
Sbjct: 664 VIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIY 723
Query: 571 LELKRASVQMKSV 583
L+ ++Q K +
Sbjct: 724 NNLRHLTLQSKGL 736
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 171/351 (48%), Gaps = 21/351 (5%)
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLEN---AR 258
N + ++ +I + + F + + +M Y+ + +++T ++ + + G L++ AR
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
LFE + ++ ++N MI YA+ EA +F M+K+ + PD+ T S C AL+
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALR 189
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
+ G+Q H +I GF+ + V NA+I MY++C F ++ N V+WN+II+
Sbjct: 190 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIIS 249
Query: 379 AFAQHGHYEKALIFFSQM--GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK--- 433
A AQ GH+ AL+ F +M +G PD TF +LL+ C + N+ + +++
Sbjct: 250 AEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANI 309
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
II +E LV + S G+L A +I M E + W S++ N +
Sbjct: 310 TKNIIVETE----LVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQEAL 364
Query: 494 LAAKKMR--ELDPQNSAVYVMLSNLYAAAGMWRDVTR----VRLLMKEQGV 538
K+M+ + P ++ MLS+ + + + VR M+E+G+
Sbjct: 365 RLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 415
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 155/346 (44%), Gaps = 65/346 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LIR T+ + V + S G+++ A+++F++M ++ +WN++I GY QNG QE+
Sbjct: 304 LIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEA 363
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCI---DNDR-------------------------- 127
LF+ M + I S + M++ C+ D+ +
Sbjct: 364 LRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDM 423
Query: 128 ------IDDAFDYFQAM--PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----- 174
+D A+ + +RNTA +N++++G+ G +E+ F +M ++
Sbjct: 424 YAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVL 483
Query: 175 ---------ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
+ TA++D + K G + KAR + D M+ KN+VSW MI+GY K+ EA
Sbjct: 484 TMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEAL 543
Query: 226 ELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----FNAMIAG 278
L+ MP N A+++ G++E +F +Q + + M+
Sbjct: 544 ILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDL 603
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ G E+A KM ++P+ +T ++ AC + ++ GR
Sbjct: 604 LGRAGRLEDAKEFVE---KMPIEPEVSTWGALLGACRVHKDMDMGR 646
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 300/571 (52%), Gaps = 78/571 (13%)
Query: 80 DVITWNAIITGYWQNGFLQESKNL----FQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF 135
D IT+N+I+ G ++ NL ++ + N+ SWN +IA D R D+ +
Sbjct: 1946 DGITYNSILFGVPSG--REDHSNLATWFYKYVDKSNVHSWNSVIA---DLARGGDSVEAL 2000
Query: 136 QA---------MPERNT--------ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYT 178
+A +P R++ + ++SG + H + F ++ +
Sbjct: 2001 RAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH------QQAFVFGFETDLFVSS 2054
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD----- 233
A++D + K G++ ARAL D + +NVVSWT MITGYV+NE+ A LF +
Sbjct: 2055 ALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEV 2114
Query: 234 ----------------------------------------YDKNVFVVTAMITGFCKVGM 253
+D ++ V ++ + K G
Sbjct: 2115 EDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQ 2174
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFT 312
++ +F+ ++ KD +S+N+MIA YAQ+G++ EAL +F GM++ + ++ + TL +V
Sbjct: 2175 PLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLL 2234
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
AC+ L G+ H VI+ E NV V ++I MY +CG + ++ F ++ N+ S
Sbjct: 2235 ACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKS 2294
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
W ++A + HG ++AL F +M G P+ ITF+S+L+AC HAG V E F M
Sbjct: 2295 WTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMK 2354
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
Y I P EHY C+VD+ RAG L +A+ + + M + D VWGSLL AC I+ NV+LG
Sbjct: 2355 HKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLG 2414
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNK 552
E+AA+K+ ELDP N YV+LSNLYA AG W DV R+R+LMK + + K +S +E+ +
Sbjct: 2415 EIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGR 2474
Query: 553 VHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
VH FL GD HP + I+ L++ +++++ +
Sbjct: 2475 VHVFLVGDKEHPHHEMIYKYLEKLTLELQKI 2505
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 190/409 (46%), Gaps = 56/409 (13%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
I S G+I+ A LF Q+ TWN II NG +++ L+++M + I +
Sbjct: 66 IHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAA-- 123
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
D F + + + + ++ G + HG L + +V
Sbjct: 124 -------------DKFTFPFVI--KACTNFLSIDLGKVVHGSL------IKYGFSGDVFV 162
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
++D + K G A + + M +NVVSWT
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWT--------------------------- 195
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+I+G G L+ AR +F+ I K+ VS+ AMI GY +N EEAL LF M
Sbjct: 196 ------TVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ 249
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
++ P++ T+VS+ AC+ + +L GR H I+N E V + A+I MYS+CG I
Sbjct: 250 AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK 309
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F + +L +WN++I + HG ++AL FS+M PD ITF+ +L AC
Sbjct: 310 DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACV 369
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
H V E F M + YGI P EHY C+ ++ +R+ L++A++ T+
Sbjct: 370 HIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTK 418
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 34/289 (11%)
Query: 14 RILFPPILRILSTPDSCGNFTP-------HSSNCLIRLFSTQYVFVNNAKISALSRAGKI 66
+ FP +++ +C NF H S LI+ + VFV N I + G
Sbjct: 125 KFTFPFVIK------ACTNFLSIDLGKVVHGS--LIKYGFSGDVFVQNNLIDFYFKCGHT 176
Query: 67 SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND 126
A ++F++M ++V++W +I+G G LQE++ +F +P KN+VSW MI G I N
Sbjct: 177 RFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQ 236
Query: 127 RIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY----- 177
+ ++A + F+ M N T ++I + G L R +N I
Sbjct: 237 QPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGIL-TLGRGIHDYAIKNCIEIGVYLG 295
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
TA++D + K G + A + + M K++ +W MIT + EA LF M +
Sbjct: 296 TALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVK 355
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+T I C ++N + + C F M Y + E
Sbjct: 356 PDAIT-FIGVLCACVHIKNVK--------EGCAYFTRMTQHYGIAPIPE 395
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 39/257 (15%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
RQ H +IR+G + + +I +YS G I + L F QI +P +WN II A +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSAC-------------------GHAGKV--- 421
G E+AL+ + M G D TF ++ AC G +G V
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 422 NESMDLF------ELMVKVYGI--IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
N +D + +KV+ + + +T ++ L G L++A +I +P +
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP-SKNV 222
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
W +++ + N + E A + + + +N + N Y + + T + +L
Sbjct: 223 VSWTAMINGYIRN---QQPEEALELFKRMQAEN-----IFPNEYTMVSLIKACTEMGILT 274
Query: 534 KEQGVTKQCAYSWIEIG 550
+G+ + IEIG
Sbjct: 275 LGRGIHDYAIKNCIEIG 291
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V++ A I S+ G I A ++F+ M K + TWN++IT +G QE+ NLF M
Sbjct: 292 VYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMER 351
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERN-----TATYNAMISGFLKHGRLE 160
N+ +++ ++ C+ + + YF M + Y M + + L+
Sbjct: 352 VNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLD 411
Query: 161 EA 162
EA
Sbjct: 412 EA 413
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 273/527 (51%), Gaps = 40/527 (7%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----PVKNIVSWNCMIA 120
++ AR+LFD++ VI WN II Y NG + +L+ SM N ++ ++
Sbjct: 58 QVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLK 117
Query: 121 GCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
C I+D + E + A++ + K G L EA RLF M R+V++
Sbjct: 118 ACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA 177
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+ AM+ G G D A L M + + + I G + C+ L Y
Sbjct: 178 WNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT---CQC--LLY------- 225
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
AR +F+ + ++ VS++AMI GY + +EAL +F M
Sbjct: 226 --------------------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQ 265
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ PD T++ V ACS L L G SH +I GF + +CNA+I MYS+CG I
Sbjct: 266 LSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKIS 325
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F ++ ++VSWN +I + HG +AL F + G PD ITF+ LLS+C
Sbjct: 326 FAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS 385
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
H+G V E F+ M + + I+P EH C+VDIL RAG +++A + MPFE D +W
Sbjct: 386 HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIW 445
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
+LL+AC I+ N+ELGE +KK++ L P+++ +V+LSN+Y+AAG W D +R+ K+
Sbjct: 446 SALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDW 505
Query: 537 GVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
G+ K SWIEI VH F+GGD SH + +I+ +L+ V+MK +
Sbjct: 506 GLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRL 552
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 135/323 (41%), Gaps = 72/323 (22%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF----------LQE 99
VFV A + ++ G + A++LF M+ +DV+ WNA+I G G +QE
Sbjct: 144 VFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQE 203
Query: 100 ----------------------SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
++ +F M V+N VSW+ MI G + +D + +A D F+
Sbjct: 204 EGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRM 263
Query: 138 M------PERNT--------ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
M P+ T + A+ GF HG L R F + + A++D
Sbjct: 264 MQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYL--IVRGFAT----DTLICNALIDM 317
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY----DKNVF 239
+ K G++ AR + + M ++VSW MI GY + EA LF+ + D F
Sbjct: 318 YSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITF 377
Query: 240 VVTAMITGFCKVGMLENARLLFE------RIQPK--DCVSFNAMIAGYAQNGVAEEALRL 291
+ +++ G++ RL F+ I P+ C+ M+ + G+ +EA
Sbjct: 378 I--CLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI---CMVDILGRAGLIDEAHHF 432
Query: 292 FSGMIKMDMQPDDATLVSVFTAC 314
M +PD ++ +AC
Sbjct: 433 IR---NMPFEPDVRIWSALLSAC 452
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 87/176 (49%), Gaps = 2/176 (1%)
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
+ + AC + L E ++ H ++N A+ SV + + +Y C ++ + F +I +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
P+++ WN II A+A +G ++ A+ + M G P+ T+ +L AC + + +++
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
K++G+ T LVD ++ G L +A ++ M D W +++A C
Sbjct: 132 HS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++R F+T + NA I S+ GKIS AR++F++M D+++WNA+I GY +G E+
Sbjct: 300 IVRGFATD-TLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEA 358
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN-----AMIS 151
LF + + +++ C+++ C + + + +F AM + M+
Sbjct: 359 LGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVD 418
Query: 152 GFLKHGRLEEATRLFEQMP-RRNVISYTAML 181
+ G ++EA MP +V ++A+L
Sbjct: 419 ILGRAGLIDEAHHFIRNMPFEPDVRIWSALL 449
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 301/582 (51%), Gaps = 69/582 (11%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
+S + G + R++FD M K+V WN +++ Y + G +ES LF+ M K I
Sbjct: 141 VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI---- 196
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------- 169
+ R + A + F + +R+ ++N+MISG++ +G E +++QM
Sbjct: 197 -------EGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDV 249
Query: 170 ---------------------------------PRRNVISYTAMLDGFMKKGEVDKARAL 196
RR S T +LD + K G++D A +
Sbjct: 250 DLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNT-LLDMYSKCGDLDGALRV 308
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGML 254
+ M +NVVSWT MI GY ++ A L +M +V +T+++ + G L
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 368
Query: 255 ENARLLFERIQPKDCVS----FNAMIAGYAQNGVAEEALRLFSGMIKMD----------M 300
+N + + + I+ + S NA++ YA+ G E A +FS M+ D +
Sbjct: 369 DNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL 428
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+PD T+ + AC++L L G++ H ++RNG+ ++ V NA++ +Y +CG + + L
Sbjct: 429 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F I S +LVSW +IA + HG+ +A+ F++M G +PD ++F+S+L AC H+G
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + F +M + I P EHY C+VD+LSR G L KA++ + +P D +WG+LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 608
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
C I ++EL E A+++ EL+P+N+ YV+L+N+YA A +V R+R + ++G+ K
Sbjct: 609 CGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRK 668
Query: 541 QCAYSWIEIGNKVHYFLGG-DMSHPCIDKIHLELKRASVQMK 581
SWIEI +V+ F+ G + SHP KI LK+ +MK
Sbjct: 669 NPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 710
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 163/348 (46%), Gaps = 61/348 (17%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
++S + G L+E R+F+ M ++NV + M+ + K G+ ++ L +
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICL-----------F 188
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+M+ ++ +R A ELF ++ D D
Sbjct: 189 KIMVEKGIEGKRPESASELFDKLCDRD--------------------------------- 215
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
+S+N+MI+GY NG+ E L ++ M+ + + D AT++SV C+ L+ G+ H
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
L I++ FE ++ N ++ MYS+CG + + F ++ N+VSW ++IA + + G +
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDG 335
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC-- 446
A+I QM G D + S+L AC +G ++ D+ + +K + +S + C
Sbjct: 336 AIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKANNM--ASNLFVCNA 392
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
L+D+ ++ G +E A V+ +++ +I+ N +GEL
Sbjct: 393 LMDMYAKCGSMEGA------------NSVFSTMVVKDIISWNTMVGEL 428
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 188/425 (44%), Gaps = 66/425 (15%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N + S+ G + A ++F++M ++V++W ++I GY ++G+ + L Q M + +
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGV 348
Query: 113 ---------VSWNCMIAGCIDNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEA 162
+ C +G +DN + D DY +A N NA++ + K G +E A
Sbjct: 349 KLDVVAITSILHACARSGSLDNGK--DVHDYIKANNMASNLFVCNALMDMYAKCGSMEGA 406
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+F M +++IS+ M+ G +K A L S + + I GY+
Sbjct: 407 NSVFSTMVVKDIISWNTMV-GELKPDSRTMACILPACASL-SALERGKEIHGYILRN--- 461
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
Y + V A++ + K G+L ARLLF+ I KD VS+ MIAGY +
Sbjct: 462 ----------GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMH 511
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G EA+ F+ M ++PD+ + +S+ ACS LL +G + +++N F
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR-FFYIMKNDFNI----- 565
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
P L + ++ ++ G+ KA F + +
Sbjct: 566 ------------------------EPKLEHYACMVDLLSRTGNLSKAYKFIETLPIA--- 598
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMV-KVYGIIP-SSEHYTCLVDILSRAGQLEKA 460
PD + +LL C ++ ++L E + +V+ + P ++ +Y L +I + A + E+
Sbjct: 599 PDATIWGALLCGC----RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEV 654
Query: 461 WQITQ 465
++ +
Sbjct: 655 KRMRE 659
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 103/262 (39%), Gaps = 55/262 (20%)
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+NA I + Q G E A+ L K +++ T SV C+ L+ L +G++ H ++
Sbjct: 69 YNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDGKKVHSIIK 126
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN---------------------- 369
N + ++ +++ Y+ CG + + F + N
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 370 -----------------------------LVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
++SWN++I+ + +G E+ L + QM G
Sbjct: 187 LFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
D D T +S+L C ++G ++ + L +K L+D+ S+ G L+ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS-SFERRINFSNTLLDMYSKCGDLDGA 305
Query: 461 WQITQGMPFEADTGVWGSLLAA 482
++ + M E + W S++A
Sbjct: 306 LRVFEKMG-ERNVVSWTSMIAG 326
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V NA + + G + AR LFD + +KD+++W +I GY +G+ E+ F M
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEA 162
I VS+ ++ C + ++ + +F M E Y M+ + G L +A
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588
Query: 163 TRLFEQMP 170
+ E +P
Sbjct: 589 YKFIETLP 596
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 282/532 (53%), Gaps = 34/532 (6%)
Query: 56 KISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV-- 113
++ A S A + AR +FD++ + D WN +I Y + QES +LF M + +
Sbjct: 44 RLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPI 103
Query: 114 ---SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
S + +I C R+ D P + ++ ++ + LF +
Sbjct: 104 DSYSLSLVIQAC---GRLKD--------PGNGQKLHTQVL-------KIGLGSDLFVE-- 143
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
TA+++ + K G+++ AR + D M+ ++V + V++ YV+ A +LF R
Sbjct: 144 -------TALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDR 196
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
MP+ D + MI G +G + A+ LF+R +D +S+++MIA YA+ + EALR
Sbjct: 197 MPERD--LVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALR 254
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
LF M ++ PD T+VSV +AC + L G+ H + RN E ++ + +++ MY+
Sbjct: 255 LFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYA 314
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG I +S F +++ ++ +W+ +I A HG E AL FS+M P+ +TF+
Sbjct: 315 KCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIG 374
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+LSAC H G V+E F M KVY + P EHY C+VDIL RAG+L++A ++ + MPF
Sbjct: 375 VLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFA 434
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
D VW +LL AC I NVE+ E A + EL+P YV+LSN+Y+ A W V VR
Sbjct: 435 PDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVR 494
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
+MK + K S IE+ N VH F+ GD SHP KI L + ++K+
Sbjct: 495 RMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKA 546
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 205/475 (43%), Gaps = 78/475 (16%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV A I ++ G I AR + D+M D++ +N ++ Y + G + + +LF MP
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPE 199
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+++VSWN MI G + A F ER+ ++++MI+ + K + EA RLF +M
Sbjct: 200 RDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEM 259
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS--WTVMITGYVKNERFCEAREL 227
NV L D ++ +V+S V G K C R
Sbjct: 260 QLANV---------------------LPDKVTMVSVLSACGDVGALGMGKMIHECIERNR 298
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
+ ++ + T+++ + K G ++N+ +F + +D +++AMI G A +G E
Sbjct: 299 I------EIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGEL 352
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL FS MI D++P+D T + V +ACS + L++EG T
Sbjct: 353 ALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEG----------------------WT 390
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
++ + D SP + + ++ + G ++A+ M F PD I
Sbjct: 391 YFTSMSKVYDV--------SPKIEHYGCVVDILGRAGRLQEAMELIKSM---PFAPDAIV 439
Query: 408 FLSLLSACGHAGKV----NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ +LL AC V +++L EL V G +Y L +I S+A + +K +
Sbjct: 440 WRALLGACRIYKNVEIAEEATVNLLELEPHVDG------NYVLLSNIYSQAKEWDKVVNV 493
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+ M V GS I ++ + E A P++ + MLS + A
Sbjct: 494 RRMMKNINIQKVPGS----SSIEVDNAVHEFVAGDQSH--PESKKILRMLSEITA 542
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 6/188 (3%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG---ILDSELAFRQIHSPNLVSWNTI 376
LN+ Q H L+I+ + N V ++ C +L + F +I SP+ WNT+
Sbjct: 16 LNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTM 75
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDP-DGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
I A+ + ++++ F QM P D + ++ ACG L ++K+
Sbjct: 76 IRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKI- 134
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
G+ T L+++ ++ G +E A I M D + LLA V + L
Sbjct: 135 GLGSDLFVETALIEMYAKFGDIEIARNILDEMA-HPDLVPYNVLLAEYVRVGEINLAHDL 193
Query: 496 AKKMRELD 503
+M E D
Sbjct: 194 FDRMPERD 201
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 175/533 (32%), Positives = 283/533 (53%), Gaps = 54/533 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV NA I A + + AR++FD + +DV++W ++ + Y + GF ++ ++F+ M
Sbjct: 199 VFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGW 258
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF-LKHGRLEEATRLFEQ 168
V N M I A E I GF ++HG +
Sbjct: 259 SG-VKPNPMTVSSI-----------LPACAELKDLKSGKEIHGFAVRHGMVV-------- 298
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
N+ +A++ + K V +AR + D M ++VVSW ++T Y KN+ + + LF
Sbjct: 299 ----NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 354
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+M + R D ++NA+I G +NG +EEA
Sbjct: 355 LKMSR---------------------DGVR--------ADEATWNAVIGGCMENGRSEEA 385
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
+ +F M KM +P++ T+ S+ ACS + L G++ H V R+ +++ A++ M
Sbjct: 386 VEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYM 445
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y++CG + S F + ++V+WNT+I A A HG+ ++AL F +M L+ P+ +TF
Sbjct: 446 YAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTF 505
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+LS C H+ V E + +F M + + + P + HY+C+VDI SRAG+L +A++ QGMP
Sbjct: 506 TGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMP 565
Query: 469 FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTR 528
E WG+LLAAC + NVEL +++AKK+ E++P N YV L N+ A MW + ++
Sbjct: 566 MEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQ 625
Query: 529 VRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
VR+LMKE+G+TK SW+++GNKVH F+ GD S+ DKI+ L +MK
Sbjct: 626 VRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMK 678
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 147/310 (47%), Gaps = 33/310 (10%)
Query: 129 DDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS----YTAMLDGF 184
+ A F +P+ + T + +IS HG EA +++ + R + + A
Sbjct: 115 NRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKAC 174
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAM 244
G+ + + + D + V+S +VFV A+
Sbjct: 175 AVSGDALRVKEVHDDATRCGVMS-----------------------------DVFVGNAL 205
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
I + K +E AR +F+ + +D VS+ ++ + Y + G + + +F M ++P+
Sbjct: 206 IHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNP 265
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
T+ S+ AC+ L+ L G++ H +R+G N+ VC+A++++Y++C + ++ + F
Sbjct: 266 MTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDL 325
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ ++VSWN ++ A+ ++ YEK F +M +G D T+ +++ C G+ E+
Sbjct: 326 MPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEA 385
Query: 425 MDLFELMVKV 434
+++F M K+
Sbjct: 386 VEMFRKMQKM 395
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 114/242 (47%), Gaps = 2/242 (0%)
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
VG AR LF+ I D + + +I+ +G++ EA++++S + + ++PD ++
Sbjct: 111 VGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAA 170
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
AC+ ++ H R G ++V V NA+I Y +C + + F + ++
Sbjct: 171 AKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDV 230
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
VSW ++ + + + G K + F +MG +G P+ +T S+L AC + ++
Sbjct: 231 VSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGF 290
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
V+ +G++ + + LV + ++ + +A + MP D W +L A N E
Sbjct: 291 AVR-HGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTAYFKNKEYE 348
Query: 491 LG 492
G
Sbjct: 349 KG 350
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 303/561 (54%), Gaps = 40/561 (7%)
Query: 35 PHS--------SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNA 86
PHS + CL + + FV+N+ I R G + AR+ FD++ KD + W
Sbjct: 119 PHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTM 178
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY 146
+I+G + G L +++ L PV++++SW +IA +R +A F+ M
Sbjct: 179 LISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTM-------- 230
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
L HG + ++ A+L K +++ R+L + K +
Sbjct: 231 -------LSHGIAPDE------------VTVIAVLSACAKLKDLELGRSLHLLVEEKGMP 271
Query: 207 S----WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
+ +I Y K F A+++F + A+I G+CK G ++ AR LF+
Sbjct: 272 TSENLVVALIDMYAKCGDFGHAQQVFDAL-GRGPRPQSWNAIIDGYCKHGHVDVARSLFD 330
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
++ +D ++FN+M+ GY +G EAL LF M + D++ D+ T+V++ TAC++L L +
Sbjct: 331 EMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQ 390
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GR H + + EA++ + A++ MY +CG + ++ + F+++ ++ +W +IA A
Sbjct: 391 GRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAF 450
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+G + AL F QM +GF P+ ++++++L+AC H+ +NE F+ M +Y I P E
Sbjct: 451 NGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIE 510
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HY C++D+L R+G L++A + + MP + + +W S+L+AC ++ +++L + AA+ + +L
Sbjct: 511 HYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKL 570
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P VYV L N+Y + W + +++R+LM+E+ V K YS I + +VH F+ D S
Sbjct: 571 EPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKS 630
Query: 563 HPCIDKIHLELKRASVQMKSV 583
HP I +I L+ S ++KS+
Sbjct: 631 HPRILEIIAMLEEISHRLKSL 651
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 259/440 (58%), Gaps = 8/440 (1%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM----SFKNVVSWTVMITG 214
L +A R+ ++MP RNV+S+TAM+ G+ ++G +A L M + N ++ ++T
Sbjct: 528 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 587
Query: 215 YVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ F R++ + ++ ++FV ++++ + K G + AR +F+ + +D VS
Sbjct: 588 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSC 647
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
A+I+GYAQ G+ EEAL LF + + M+ + T SV TA S L L+ GRQ H V+R
Sbjct: 648 TAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR 707
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
V + N++I MYS+CG + S F + ++SWN ++ +++HG +A+
Sbjct: 708 AKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVEL 767
Query: 393 FSQMGL-NGFDPDGITFLSLLSACGHAGKVNESMDLF-ELMVKVYGIIPSSEHYTCLVDI 450
F M N PD +TFL++LS C H G + +++F E++ + G P EHY C+VD+
Sbjct: 768 FKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDL 827
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
RAG++E+A++ + MPFE +WGSLL AC ++ NV +GE A+++ E++ +N+ Y
Sbjct: 828 FGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNY 887
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V+LSNLYA+AG W DV VR LMKE+ V K+ SWIE+ +H F D SHP +++
Sbjct: 888 VILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVF 947
Query: 571 LELKRASVQMKSVDDFVEIA 590
+++ S+++K E++
Sbjct: 948 AKVRELSIKIKEAGYVPELS 967
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 135/253 (53%), Gaps = 10/253 (3%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y+ V++ T +I + K L +AR + + + ++ VS+ AMI+GY+Q G A EAL LF
Sbjct: 508 YEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFV 567
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ P++ T +V T+C++ GRQ H LVI+ FE+++ V ++++ MY++ G
Sbjct: 568 EMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAG 627
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ F + ++VS II+ +AQ G E+AL F ++ G + +T+ S+L+
Sbjct: 628 KICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLT 687
Query: 414 ACGHAGKVNESMDLFELMVKV----YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
A ++ + +++ Y ++ +S L+D+ S+ G L + +I MP
Sbjct: 688 ALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS-----LIDMYSKCGSLTYSRRIFDSMP- 741
Query: 470 EADTGVWGSLLAA 482
E W ++L
Sbjct: 742 ERTVISWNAMLVG 754
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 180/356 (50%), Gaps = 26/356 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V++ I ++ + AR++ D+M ++V++W A+I+GY Q G+ E+ +LF M
Sbjct: 512 VYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLM 571
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLEE 161
N ++ ++ C + + + + ++ ++++ + K G++ E
Sbjct: 572 SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICE 631
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----------SDYMSFKNVVSWTVM 211
A R+F+ +P R+V+S TA++ G+ + G ++A L S+Y+++ +V++
Sbjct: 632 ARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSG 691
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ + + R + L ++P Y V + ++I + K G L +R +F+ + + +S
Sbjct: 692 LAA-LDHGRQVHSHVLRAKLPFY---VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVIS 747
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+NAM+ GY+++G+ EA+ LF M + + ++PD T ++V + CS + + G + +
Sbjct: 748 WNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEM 807
Query: 331 I--RNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
+ ++GFE + V+ ++ R G + ++ E + P W +++ A H
Sbjct: 808 VNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 863
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 47/290 (16%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
++FV ++ + ++AGKI AR++FD + +DV++ AII+GY Q G +E+ +LF+ +
Sbjct: 612 HIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQ 671
Query: 109 VK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLE 160
+ N V++ ++ +D + Y N++I + K G L
Sbjct: 672 REGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLT 731
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ R+F+ MP R VIS+ AML G+ K G +A L M +N V
Sbjct: 732 YSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK------------- 778
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL--LFERIQPKDCVS-----FN 273
PD A+++G C G +E+ L +E + KD +
Sbjct: 779 -----------PD----SVTFLAVLSG-CSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG 822
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++ + + G EEA F + KM +P A S+ AC Q ++ G
Sbjct: 823 CVVDLFGRAGRVEEA---FEFIKKMPFEPTAAIWGSLLGACRVHQNVHIG 869
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 107/218 (49%), Gaps = 11/218 (5%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
SV T C + + EG++ H +I+ +E V + +I +Y++C + D+ ++
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
N+VSW +I+ ++Q G+ +AL F +M ++G P+ TF ++L++C + +
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601
Query: 429 ELMVKVYGIIPSSEHY----TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
L++K S E + + L+D+ ++AG++ +A ++ G+P +
Sbjct: 602 SLVIKT-----SFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 656
Query: 485 INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ L+ E +L + RE N Y S L A +G+
Sbjct: 657 LGLDEEALDLFRRLQREGMRSNYVTYA--SVLTALSGL 692
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 185/657 (28%), Positives = 313/657 (47%), Gaps = 122/657 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N + + G+ A++LFD+M ++V++WN++I+GY Q GF E NLF+ +
Sbjct: 54 LFLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARM 113
Query: 110 KN---------------------------------------IVSWNCMIAGCIDNDRIDD 130
+ ++ N +I RID
Sbjct: 114 SDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDW 173
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR------------------ 172
A F++ E ++ ++N++I+G+++ G +E RL +M R
Sbjct: 174 ARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGS 233
Query: 173 -----------------------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+V+ TA+LD + K G+++ A + M NVV +
Sbjct: 234 NFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYN 293
Query: 210 VMITGYVKNERFC-----EARELFYRMP-------------------------------- 232
MI G+++ E EA LF+ M
Sbjct: 294 AMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHA 353
Query: 233 -----DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
+ + F+ A++ + G +E+ F D VS+ ++I G+ QNG E
Sbjct: 354 QIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEG 413
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
L LF ++ +PD+ T+ + +AC+ L + G Q H I+ G + N+ I
Sbjct: 414 GLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQIC 473
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY++CG I + + F++ +P++VSW+ +I++ AQHG ++A+ F M +G P+ IT
Sbjct: 474 MYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHIT 533
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
FL +L AC H G V E + FE+M K +GI P+ +H C+VD+L RAG+L +A
Sbjct: 534 FLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDS 593
Query: 468 PFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVT 527
FE D +W SLL+AC ++ + G+ A+++ EL+P+ +A YV+L N+Y AG+ T
Sbjct: 594 GFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPAT 653
Query: 528 RVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVD 584
+R LMK++GV K+ SWIE+GN VH F+ GD SHP I+++L+ ++K +D
Sbjct: 654 EIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLD 710
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 182/414 (43%), Gaps = 65/414 (15%)
Query: 134 YFQAMPERNTATYNAMI-----SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
Y+ +P ++ TY ++ +G L HG+L + + + + +L + K G
Sbjct: 11 YYLGLP-LDSVTYTKLVQCSTRTGSLIHGKLAH-MHMIKTCFKPCLFLLNNLLYMYCKCG 68
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY--RMPD--YDK-------- 236
E D A+ L D M +NVVSW +I+GY + + E LF RM D DK
Sbjct: 69 ETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALS 128
Query: 237 -------------------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
V + ++I +CK G ++ ARL+FE D VS
Sbjct: 129 VCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVS 188
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA--LQLLNEGRQSHVL 329
+N++IAGY + G +E LRL M++ + + L S AC + + G+ H
Sbjct: 189 WNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGC 248
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ-----HG 384
++ G + +V V A++ Y++ G + D+ F+ + PN+V +N +IA F Q
Sbjct: 249 AVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADE 308
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII----PS 440
+A+ F +M G P TF S+L AC +++ FE +++ I
Sbjct: 309 FANEAMYLFFEMQSRGMKPSEFTFSSILKAC-------STIEAFECGKQIHAQIFKYNLQ 361
Query: 441 SEHY--TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
S+ + LV++ S +G +E + P + D W SL+ V N E G
Sbjct: 362 SDEFIGNALVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGG 414
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 302 PDDATLVSVFTACSA-LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
P D+ + CS L G+ +H+ +I+ F+ + + N ++ MY +CG ++
Sbjct: 16 PLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKK 75
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++ N+VSWN++I+ + Q G Y + + F + ++ D TF + LS CG
Sbjct: 76 LFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLD 135
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ L ++ V G+ L+D+ + G+++ A + + E D+ W SL+
Sbjct: 136 LRLGR-LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESAD-ELDSVSWNSLI 193
Query: 481 AACV-INLNVELGELAAKKMRE 501
A V I N E+ L K +R
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRH 215
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 29 SCGNFTPHSSNCLIRLFSTQ-----YVFVNNAKISALSRAGKISAARQLFDQMTTKDVIT 83
+C N S I ++ + + + N++I ++ G I +A F + D+++
Sbjct: 439 ACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVS 498
Query: 84 WNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
W+ +I+ Q+G +E+ +LF+ M N +++ ++ C +++ YF+ M
Sbjct: 499 WSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMK 558
Query: 140 ERNTATYNAMISGFL-----KHGRLEEA 162
+ + T N S + + GRL EA
Sbjct: 559 KDHGITPNVKHSACIVDLLGRAGRLAEA 586
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 182/581 (31%), Positives = 290/581 (49%), Gaps = 72/581 (12%)
Query: 64 GKISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
G ++ R + Q+ + + + A+ Y + +++ +F MPV++ V+WN ++
Sbjct: 73 GDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALV 132
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNAMI--------------------SGFLKHGRL 159
AG N A + M E +++ F L
Sbjct: 133 AGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGL 192
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
EE + TA+LD + K G++ AR + D+M KN VSW MI GY +N
Sbjct: 193 EELVNV-----------ATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 220 RFCEARELFYRMPD-------------------------------------YDKNVFVVT 242
EA LF RM + D NV V+
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMN 301
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
A+IT + K ++ A +F+ + + VS+NAMI G AQNG +E+A+RLF+ M +++P
Sbjct: 302 ALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKP 361
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D TLVSV A + + + R H IR + +V V A+I MY++CG + + + F
Sbjct: 362 DSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILF 421
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
++++WN +I + HG + A+ F +M G P+ TFLS+LSAC HAG V+
Sbjct: 422 NSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVD 481
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
E + F M + YG+ P EHY +VD+L RAG+L++AW Q MP + V+G++L A
Sbjct: 482 EGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGA 541
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
C ++ NVEL E +A+K+ EL PQ +V+L+N+YA A MW+DV RVR M++ G+ K
Sbjct: 542 CKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTP 601
Query: 543 AYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+S I++ N++H F G +H +I+ L + ++K+V
Sbjct: 602 GWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAV 642
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 184/365 (50%), Gaps = 18/365 (4%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR + V V A + A + G I AAR +FD M TK+ ++WNA+I GY QNG +E+
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 102 NLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGF 153
LF M + + VS + C + +D+ + + + N + NA+I+ +
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV--SWTV- 210
K R++ A+ +F+++ RR +S+ AM+ G + G + A L M +NV S+T+
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 211 -MITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+I +AR + + D++V+V+TA+I + K G + AR+LF + +
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+++NAMI GY +G + A+ LF M + + P++ T +SV +ACS L++EGR+
Sbjct: 428 HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYF 487
Query: 328 VLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQ--IHSPNLVSWNTIIAAFAQHG 384
+ + G E + ++ + R G LD AF Q P L + ++ A H
Sbjct: 488 TSMKEDYGLEPGMEHYGTMVDLLGRAGK-LDEAWAFIQKMPMDPGLSVYGAMLGACKLHK 546
Query: 385 HYEKA 389
+ E A
Sbjct: 547 NVELA 551
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 58/315 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+R+ V V NA I+ S+ ++ A +FD++ + ++WNA+I G QNG +++
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347
Query: 101 KNLFQSMPVKNIVSWNCMIAGCI------------------------DND---------- 126
LF M ++N+ + + I D D
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407
Query: 127 -----RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI----SY 177
R++ A F + ER+ T+NAMI G+ HG + A LFE+M ++ ++
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 178 TAMLDGFMKKGEVDKARAL-----SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
++L G VD+ R DY + + M+ + + EA +MP
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527
Query: 233 DYDKNVFVVTAMITGFCKVG-----MLENARLLFERIQPKDCVSFNAMIAG-YAQNGVAE 286
D + V AM+ G CK+ E+A+ +FE + P++ V ++ ++A YA + +
Sbjct: 528 -MDPGLSVYGAML-GACKLHKNVELAEESAQKIFE-LGPQEGV-YHVLLANIYANASMWK 583
Query: 287 EALRLFSGMIKMDMQ 301
+ R+ + M K +Q
Sbjct: 584 DVARVRTAMEKNGLQ 598
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL F M P T S+ C+A L GR H + G ++ A+
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG-LNGFDPDGI 406
MY++C D+ F ++ + V+WN ++A +A++G A+ +M G PD I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 407 TFLSLL 412
T +S+L
Sbjct: 163 TLVSVL 168
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 185/641 (28%), Positives = 312/641 (48%), Gaps = 99/641 (15%)
Query: 16 LFPPILRILSTPDSCGNFTP-------HSSNCLIRLFSTQYVFVNNAKISALSRAGKISA 68
L P + S +CG H + L + Q FV NA + ++ G +
Sbjct: 137 LLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQ--FVENALLGMYTKCGSVGD 194
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-----PVKNIVSWNCMIAGC- 122
A +LF M + +++ A++ G Q G + ++ LF M PV + VS + ++ C
Sbjct: 195 AVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPV-DPVSVSSVLGACA 253
Query: 123 ---------------------------------IDNDRID---------DAFDYFQAMPE 140
+ N ID +A F+++P
Sbjct: 254 QACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPS 313
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARAL 196
++N +I+GF + G +A + M N ++Y+ +L +K +V ARA+
Sbjct: 314 VTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAM 373
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----------------- 233
D +S +V +W +++GY + E+ + ELF RM PD
Sbjct: 374 FDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGIL 433
Query: 234 --------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
++FV + ++ + K G + AR +F ++ +D V +N++I+G
Sbjct: 434 DFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGL 493
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
+ + +EA F M + + P +++ S+ +CS L + GRQ H V+++G++ NV
Sbjct: 494 TIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNV 553
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
V +A+I MY++CG + D+ L F + N+V+WN +I +AQ+G +KA+ F M
Sbjct: 554 YVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTT 613
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
PD +TF+++L+ C H+G V+++M F M YGIIP +EHYTCL+D L RAG+ +
Sbjct: 614 EQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVE 673
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
+ MP + D +W LLAACV++ N ELG+ AA+ + +DP+N + YV+LSN+YA+
Sbjct: 674 VEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYAS 733
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
G D + VR LM +GV K YSWI+ + V F+ D
Sbjct: 734 LGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVAD 774
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 167/359 (46%), Gaps = 34/359 (9%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D N ++ Y + G + + F+++P N S+N ++ +D A D MP
Sbjct: 42 DTFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMP 101
Query: 140 ERNTATYNAMISGFLKH-GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD 198
RN ++N +IS + G EA ++ +M + L
Sbjct: 102 RRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGL---------------------LPT 140
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
+ + +V+S + + + R C + + D N FV A++ + K G + +A
Sbjct: 141 HFTLASVLSACGGLAA-LGDGRRCHGVAVKVGL---DANQFVENALLGMYTKCGSVGDAV 196
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC---- 314
LF + + VSF AM+ G AQ G ++ALRLF+ M + + D ++ SV AC
Sbjct: 197 RLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQAC 256
Query: 315 ----SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
S + G+ H LV+R GF ++ V N++I MY++C + ++ F + S +
Sbjct: 257 ATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTI 316
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
VSWN +I F Q G KA+ S M GF+P+ +T+ +LL++C A V+ + +F+
Sbjct: 317 VSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFD 375
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 131/249 (52%), Gaps = 10/249 (4%)
Query: 228 FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN-GVAE 286
F +P N + A ++ C+ G L+ AR L + ++ VS+N +I+ A++ G
Sbjct: 66 FRALPS--PNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGG 123
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
EA+ ++ M + P TL SV +AC L L +GR+ H + ++ G +AN V NA++
Sbjct: 124 EAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALL 183
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MY++CG + D+ F + PN VS+ ++ AQ G + AL F++M +G D +
Sbjct: 184 GMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPV 243
Query: 407 TFLSLLSACGHAGKVNESM-DLFELMVKVYGII-----PSSEHY-TCLVDILSRAGQLEK 459
+ S+L AC A + S+ F L ++ ++ S +H L+D+ ++ ++++
Sbjct: 244 SVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDE 303
Query: 460 AWQITQGMP 468
A ++ + +P
Sbjct: 304 AVKVFESLP 312
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 210/511 (41%), Gaps = 72/511 (14%)
Query: 35 PHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQN 94
P + R + + NA +SA RAG + AAR L M ++ ++WN +I+ ++
Sbjct: 59 PRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARS 118
Query: 95 -GFLQESKNLFQSMPVKNIVSWNCMIAGCI----------DNDRIDDAFDYFQAMPERNT 143
G E+ ++ M + ++ + +A + D R + + N
Sbjct: 119 PGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGV--AVKVGLDANQ 176
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
NA++ + K G + +A RLF M R N +S+TAM+ G + G +D A L M
Sbjct: 177 FVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRS 236
Query: 204 NVVSWTVMITGYV--------------KNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
V V ++ + + R +A + + V ++I +
Sbjct: 237 GVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYT 296
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K ++ A +FE + VS+N +I G+ Q G +A+ + S M + +P++ T +
Sbjct: 297 KCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSN 356
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ +C + ++ R F +I P+
Sbjct: 357 LLASCIKARDVHSARA-----------------------------------MFDKISRPS 381
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ +WNT+++ + Q ++ + F +M PD T +LS+C G ++ +
Sbjct: 382 VTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHS 441
Query: 430 LMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN- 486
V+ + ++ + LVD+ S+ GQ+ A I M E D W S+++ I+
Sbjct: 442 ASVR---FLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMT-ERDVVCWNSIISGLTIHS 497
Query: 487 LNVELGELAAKKMRE--LDPQNSAVYVMLSN 515
LN E + K+MRE + P S+ M+++
Sbjct: 498 LNKEAFDF-FKQMRENGIMPTESSYASMINS 527
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 36/199 (18%)
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSP-------------------------------N 369
+ N ++ +YSR G + LAFR + SP N
Sbjct: 45 LANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRN 104
Query: 370 LVSWNTIIAAFAQH-GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
VSWNT+I+A A+ G +A+ + +M G P T S+LSACG + +
Sbjct: 105 AVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCH 164
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM--PFEAD-TGVWGSLLAACVI 485
+ VKV G+ + L+ + ++ G + A ++ GM P E T + G L I
Sbjct: 165 GVAVKV-GLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSI 223
Query: 486 NLNVELGELAAKKMRELDP 504
+ + L + +DP
Sbjct: 224 DDALRLFARMCRSGVPVDP 242
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 171/557 (30%), Positives = 311/557 (55%), Gaps = 18/557 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV NA + +++G + ARQ F+ + +D ++WN II GY Q E+ +LF+ M +
Sbjct: 463 LFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNL 522
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEE 161
I VS +++ C ++ + E + +++I + K G ++
Sbjct: 523 LGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDS 582
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A ++ MP R+V+S A++ G+ + +++A L M + + +++ ++ +
Sbjct: 583 AHKILACMPERSVVSMNALIAGYAQI-NLEQAVNLFRDMLVEGINSTEITFASLLDACHE 641
Query: 218 NERFCEARE---LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF-ERIQPKDCVSFN 273
++ R+ L +M + F+ +++ + +A +LF E PK V +
Sbjct: 642 QQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWT 701
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AMI+G +QN + AL+L+ M ++ PD AT VS AC+ + + +G ++H L+
Sbjct: 702 AMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHT 761
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIF 392
GF+++ +A++ MY++CG + S F+++ +++SWN++I FA++G+ E AL
Sbjct: 762 GFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRV 821
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M + PD +TFL +L+AC H+G+V+E +F++MV +YG+ P ++H C+VD+L
Sbjct: 822 FDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLG 881
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
R G L++A + + FE D VW ++L AC I+ + G+ AA+K+ EL+PQNS+ YV+
Sbjct: 882 RWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVL 941
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
LSN+YAA+G W +V +R M+E+GV K SWI +G + + F+ GD SH +I
Sbjct: 942 LSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAI 1001
Query: 573 LKRASVQMKSVDDFVEI 589
LK + M+ D V++
Sbjct: 1002 LKDLTPLMRENDYVVQL 1018
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 216/464 (46%), Gaps = 81/464 (17%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV- 109
+ A I ++ ++ AR +FD D ++W ++I GY + G +E+ +FQ M
Sbjct: 196 YCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKV 255
Query: 110 ---KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+ V++ +I +D R+D+A D F MP RN +N MISG K G EA F
Sbjct: 256 GQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFF 315
Query: 167 EQMPR---------------------------------------RNVISYTAMLDGFMKK 187
+ M + NV ++++ + K
Sbjct: 316 QNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKC 375
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD-------- 233
G+++ A+ + D ++ +NVV W M+ GYV+N E ELF+ M PD
Sbjct: 376 GKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSIL 435
Query: 234 -----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ N+FV A++ + K G LE+AR FE I+ +D V
Sbjct: 436 SACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNV 495
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+N +I GY Q EA LF M + + PD+ +L S+ +AC++++ L +G+Q H L
Sbjct: 496 SWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLS 555
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ G E + +++I MY++CG I + + ++VS N +IA +AQ + E+A+
Sbjct: 556 VKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQI-NLEQAV 614
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
F M + G + ITF SLL AC K+N + L++K+
Sbjct: 615 NLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKM 658
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 218/459 (47%), Gaps = 30/459 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
V+V ++ +S ++ GK+ AA+++FD + ++V+ WNA++ GY QNG+ E LF +M
Sbjct: 362 VYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKS 421
Query: 109 ---VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLEE 161
+ +++ +++ C +D + + A+ NA++ + K G LE+
Sbjct: 422 CGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALED 481
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA------------LSDYMSFKNVVSWT 209
A + FE + R+ +S+ ++ G+++ E D+ A L D +S +++S
Sbjct: 482 ARQQFELIRNRDNVSWNVIIVGYVQ--EEDEVEAFHLFRRMNLLGILPDEVSLASILSAC 539
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
+ G + ++ + ++ +++I + K G +++A + + +
Sbjct: 540 ASVRGLEQGKQV----HCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSV 595
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS NA+IAGYAQ + E+A+ LF M+ + + T S+ AC Q LN GRQ H L
Sbjct: 596 VSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSL 654
Query: 330 VIRNGFEANVSVCN-AVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFAQHGHYE 387
+++ G + + +++ MY D+ + F + +P + V W +I+ +Q+
Sbjct: 655 ILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSV 714
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
AL + +M PD TF+S L AC + + + L+ G + L
Sbjct: 715 VALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHT-GFDSDELTSSAL 773
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
VD+ ++ G ++ + Q+ + M + D W S++ N
Sbjct: 774 VDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKN 812
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 205/423 (48%), Gaps = 46/423 (10%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
+ N + ++ + A + F Q+ KD++ WN+I++ + + GF F +
Sbjct: 96 LGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLL---- 151
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
WN +G N+ + A+ + A + G H + + FE
Sbjct: 152 ---WN---SGVWPNE-------FTFAIVLSSCARLEMVKCGRQVHCNVVKMG--FES--- 193
Query: 172 RNVISYT--AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
ISY A++ + K + AR++ D + VSWT MI GY+K EA ++F
Sbjct: 194 ---ISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQ 250
Query: 230 RMP----DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
M + D+ FV +I + +G L+NA LF R+ ++ V++N MI+G+A+ G
Sbjct: 251 EMEKVGQEPDQVAFVT--VINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYG 308
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EA+ F M K ++ +TL SV +A ++L L+ G H ++ G +NV V +++
Sbjct: 309 VEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSL 368
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
++MY++CG + ++ F ++ N+V WN ++ + Q+G+ + + F M GF PD
Sbjct: 369 VSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDD 428
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT------CLVDILSRAGQLEK 459
T+ S+LSAC + +L +++ +I ++ + LVD+ +++G LE
Sbjct: 429 FTYSSILSACA-------CLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALED 481
Query: 460 AWQ 462
A Q
Sbjct: 482 ARQ 484
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 149/297 (50%), Gaps = 11/297 (3%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K ++ A F++++ KD +++N++++ +++ G ++ F + + P++ T
Sbjct: 104 YAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTF 163
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN-AVITMYSRCGGILDSELAFRQIH 366
V ++C+ L+++ GRQ H V++ GFE+ +S C A+I MY++C + D+ F
Sbjct: 164 AIVLSSCARLEMVKCGRQVHCNVVKMGFES-ISYCEGALIGMYAKCNFLTDARSIFDGAV 222
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+ VSW ++I + + G E+A+ F +M G +PD + F+++++A G+++ + D
Sbjct: 223 ELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASD 282
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM---PFEADTGVWGSLLAAC 483
LF M + + ++ ++ G +A + Q M ++ GS+L+A
Sbjct: 283 LFSRMPNRNVVA-----WNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAI 337
Query: 484 VINLNVELGELA-AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVT 539
++ G L A+ +++ N V L ++YA G +V + EQ V
Sbjct: 338 ASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVV 394
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 181/622 (29%), Positives = 301/622 (48%), Gaps = 109/622 (17%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F + +S +AG I++AR+LF M K V+++ ++ + G ++++ L++ P+
Sbjct: 150 FTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLH 209
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAM------P------------------------- 139
++ + MI+G + N+ DAF F+ M P
Sbjct: 210 SVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVV 269
Query: 140 ---------ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
E++ +N++I+ +L+ G A R+F+ M R+V+S+TA+LD + G++
Sbjct: 270 GLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDL 329
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY---------- 234
D AR + D M +N VSW +I + + EA +L+ +M P+
Sbjct: 330 DGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSAC 389
Query: 235 ---------------------DKNVFVVTAMITGFCKV---------------------- 251
N+FV +++I +CK
Sbjct: 390 ATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWN 449
Query: 252 ---------GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
G + A LF ++ ++ VS+N MI+GYA+N +AL F M+ P
Sbjct: 450 SLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIP 509
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
+ TL SV AC+ L L GR H +++ G E N+ + A+ MY++ G + S F
Sbjct: 510 GEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVF 569
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
Q+ N ++W ++ A++G E+++ F M NG P+ TFL++L AC H G V
Sbjct: 570 YQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVE 629
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+++ FE M + +GI P S+HYTC+VD+L+RAG L +A ++ + E DT W SLL+A
Sbjct: 630 QAIHYFETM-QAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSA 688
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
C N E+GE AAKK+ EL+ N+A YV+LSN+YA+ G W+D R+LM+ + K
Sbjct: 689 CSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGASLKKDA 748
Query: 543 AYSWIEIGNKVHYFLGGDMSHP 564
SW+++ + H F HP
Sbjct: 749 GCSWLQLRGQYHAFFSWKEKHP 770
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 205/455 (45%), Gaps = 103/455 (22%)
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
DR D AF A ++ TY+ M+S +K G + A RLF MP ++V+SYT M+D M
Sbjct: 133 DR-DQAFRDCVAADAASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALM 191
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------ 233
K+G V A L + +V +T MI+G+V+NE +A +F +M P+
Sbjct: 192 KRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLIC 251
Query: 234 --------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
++K++ V ++IT + ++G AR +F+ ++ +
Sbjct: 252 VIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVR 311
Query: 268 DCVSFNAMIAGYA-------------------------------QNGVAEEALRLFSGMI 296
D VS+ A++ YA Q G EAL+L+S M+
Sbjct: 312 DVVSWTALLDVYADLGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQML 371
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC---- 352
+P+ + SV +AC+ LQ L G + H ++ G N+ V +++I MY +C
Sbjct: 372 ADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCT 431
Query: 353 ---------------------------GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
G ++++E F ++ + N VSWNT+I+ +A++
Sbjct: 432 YAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRR 491
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+ AL +F M +G P IT S+L AC + + + +VK+ GI + T
Sbjct: 492 FGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKL-GIEDNIFMGT 550
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
L D+ +++G L+ + ++ MP E + W +++
Sbjct: 551 ALCDMYAKSGDLDSSRRVFYQMP-EKNNITWTAMV 584
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 143/289 (49%), Gaps = 19/289 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
+++ S+ +FV+++ I + + + A+++F+ + K+ + WN++I+GY NG + E++
Sbjct: 406 LKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAE 465
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF-------- 153
LF MP +N VSWN MI+G +N R DA +YF AM +S
Sbjct: 466 GLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLC 525
Query: 154 -LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
L+ GR+ A + + N+ TA+ D + K G++D +R + M KN ++WT M+
Sbjct: 526 SLEMGRMVHA-EIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKNNITWTAMV 584
Query: 213 TGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQ----P 266
G +N E+ LF M + N A++ G++E A FE +Q P
Sbjct: 585 QGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIP 644
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+ M+ A+ G EA L ++K+ + D ++ S+ +ACS
Sbjct: 645 PKSKHYTCMVDVLARAGCLPEAEEL---LMKVSSELDTSSWSSLLSACS 690
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 152/376 (40%), Gaps = 93/376 (24%)
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
+ F + G ++A R + +Y M+ +K G++ AR L M K+VVS+T
Sbjct: 126 AAFARAGDRDQAFRDCVAADAASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTT 185
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
M+ +K +A EL+ R P + F TAMI+GF +
Sbjct: 186 MVDALMKRGSVRDAVELYERCPLHSVAFF--TAMISGFVR-------------------- 223
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
N + ++A +F M+ ++P+ TL+ V AC + L
Sbjct: 224 -----------NELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLA 272
Query: 331 IR-NGFEANVSVCNAVITMYSRCG------------------------------GILD-S 358
++ N FE ++ V N++IT+Y R G G LD +
Sbjct: 273 VKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGA 332
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG-- 416
+ + N VSW T+IA Q G +AL +SQM +G P+ F S+LSAC
Sbjct: 333 RRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATL 392
Query: 417 ---------HAG--KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
HA K+ S +LF + SS L+D+ + Q A ++
Sbjct: 393 QDLRGGTRIHANALKMGSSTNLF---------VSSS-----LIDMYCKCKQCTYAQRVFN 438
Query: 466 GMPFEADTGVWGSLLA 481
+P E +T W SL++
Sbjct: 439 SLP-EKNTVCWNSLIS 453
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 283/552 (51%), Gaps = 48/552 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPV--KNIVSWNCMIAG----CIDNDRIDDAFD 133
D+ A++ Y + G L +++ LF S+ ++IV+WN MIA + I
Sbjct: 141 DLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQ 200
Query: 134 YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGE 189
QA N++T +++ + L + + R NV+ TA+LD + K
Sbjct: 201 MQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHL 260
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------------ 231
+ AR + + ++ KN V W+ MI GYV ++ +A L+ M
Sbjct: 261 LFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLR 320
Query: 232 --------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
D + V ++I+ + K G+++NA + + KD VS
Sbjct: 321 ACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVS 380
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
++A+I+G QNG AE+AL +F M + P T++++ ACS L L G H +
Sbjct: 381 YSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTV 440
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
GF + S+CNA+I MYS+CG I S F ++ + +++SWNT+I + HG +AL
Sbjct: 441 VRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALS 500
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F ++ G PD +T +++LSAC H+G V E F M + + I P HY C+VD+L
Sbjct: 501 LFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLL 560
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
+RAG L++A+ Q MPF + +WG+LLAAC + N+E+GE +KK++ L P+ + +V
Sbjct: 561 ARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFV 620
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHL 571
++SN+Y++ G W D +R + + G K SW+EI +H F+GG SHP I+
Sbjct: 621 LMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINK 680
Query: 572 ELKRASVQMKSV 583
+L+ VQMK +
Sbjct: 681 KLQELLVQMKKL 692
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 160/352 (45%), Gaps = 11/352 (3%)
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
++ A +F+Q+P+ +V+ + M+ + G ++ L +M V +K
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 219 ERFCEARELFYRMPDY------DKNVFVVTAMITGFCKVGMLENARLLFERI--QPKDCV 270
+A +L + + +++V TA++ + K G L A+ LF I Q +D V
Sbjct: 117 CSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIV 176
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++NAMIA ++ + + + + + M + + P+ +TLVS+ L++G+ H
Sbjct: 177 AWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYY 236
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
IRN F NV + A++ MY++C + + F ++ N V W+ +I + H AL
Sbjct: 237 IRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDAL 296
Query: 391 IFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
+ M + G +P T ++L AC + L M+K G+ + L+
Sbjct: 297 ALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS-GMDLDTTVGNSLIS 355
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
+ ++ G ++ A M DT + ++++ CV N E L ++M+
Sbjct: 356 MYAKCGIMDNAVGFLDEM-IAKDTVSYSAIISGCVQNGYAEKALLIFRQMQS 406
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
+ NA I S+ GKI+ +R++FD+M +D+I+WN +I GY +G E+ +LFQ +
Sbjct: 450 ICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALG 509
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEA 162
+ V+ +++ C + + + +F +M + A Y M+ + G L+EA
Sbjct: 510 LKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEA 569
Query: 163 TRLFEQMP 170
++MP
Sbjct: 570 YTFIQRMP 577
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N+ IS ++ G + A D+M KD ++++AII+G QNG+ +++ +F+ M
Sbjct: 349 VGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSG 408
Query: 112 IVSW-NCMIA--------GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
I + MIA + + + + +T+ NA+I + K G++ +
Sbjct: 409 IAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTN-DTSICNAIIDMYSKCGKITIS 467
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
+F++M R++IS+ M+ G+ G +A +L
Sbjct: 468 REIFDRMQNRDIISWNTMIIGYGIHGLCVEALSL 501
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 182/581 (31%), Positives = 290/581 (49%), Gaps = 72/581 (12%)
Query: 64 GKISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
G ++ R + Q+ + + + A+ Y + +++ +F MPV++ V+WN ++
Sbjct: 73 GDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALV 132
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNAMI--------------------SGFLKHGRL 159
AG N A + M E +++ F L
Sbjct: 133 AGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGL 192
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
EE + TA+LD + K G++ AR + D+M KN VSW MI GY +N
Sbjct: 193 EELVNV-----------ATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 220 RFCEARELFYRMPD-------------------------------------YDKNVFVVT 242
EA LF RM + D NV V+
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMN 301
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
A+IT + K ++ A +F+ + + VS+NAMI G AQNG +E+A+RLF+ M +++P
Sbjct: 302 ALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKP 361
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D TLVSV A + + + R H IR + +V V A+I MY++CG + + + F
Sbjct: 362 DSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILF 421
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
++++WN +I + HG + A+ F +M G P+ TFLS+LSAC HAG V+
Sbjct: 422 NSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVD 481
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
E + F M + YG+ P EHY +VD+L RAG+L++AW Q MP + V+G++L A
Sbjct: 482 EGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGA 541
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
C ++ NVEL E +A+K+ EL PQ +V+L+N+YA A MW+DV RVR M++ G+ K
Sbjct: 542 CKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTP 601
Query: 543 AYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+S I++ N++H F G +H +I+ L + ++K+V
Sbjct: 602 GWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAV 642
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 184/365 (50%), Gaps = 18/365 (4%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR + V V A + A + G I AAR +FD M TK+ ++WNA+I GY QNG +E+
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 102 NLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGF 153
LF M + + VS + C + +D+ + + + N + NA+I+ +
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV--SWTV- 210
K R++ A+ +F+++ RR +S+ AM+ G + G + A L M +NV S+T+
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 211 -MITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+I +AR + + D++V+V+TA+I + K G + AR+LF + +
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+++NAMI GY +G + A+ LF M + + P++ T +SV +ACS L++EGR+
Sbjct: 428 HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYF 487
Query: 328 VLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQ--IHSPNLVSWNTIIAAFAQHG 384
+ + G E + ++ + R G LD AF Q P L + ++ A H
Sbjct: 488 TSMKEDYGLEPGMEHYGTMVDLLGRAGK-LDEAWAFIQKMPMDPGLSVYGAMLGACKLHK 546
Query: 385 HYEKA 389
+ E A
Sbjct: 547 NVELA 551
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 58/315 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+R+ V V NA I+ S+ ++ A +FD++ + ++WNA+I G QNG +++
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347
Query: 101 KNLFQSMPVKNIVSWNCMIAGCI------------------------DND---------- 126
LF M ++N+ + + I D D
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407
Query: 127 -----RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI----SY 177
R++ A F + ER+ T+NAMI G+ HG + A LFE+M ++ ++
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 178 TAMLDGFMKKGEVDKARAL-----SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
++L G VD+ R DY + + M+ + + EA +MP
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527
Query: 233 DYDKNVFVVTAMITGFCKVG-----MLENARLLFERIQPKDCVSFNAMIAG-YAQNGVAE 286
D + V AM+ G CK+ E+A+ +FE + P++ V ++ ++A YA + +
Sbjct: 528 -MDPGLSVYGAML-GACKLHKNVELAEESAQKIFE-LGPQEGV-YHVLLANIYANASMWK 583
Query: 287 EALRLFSGMIKMDMQ 301
+ R+ + M K +Q
Sbjct: 584 DVARVRTAMEKNGLQ 598
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL F M P T S+ C+A L GR H + G ++ A+
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG-LNGFDPDGI 406
MY++C D+ F ++ + V+WN ++A +A++G A+ +M G PD I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 407 TFLSLL 412
T +S+L
Sbjct: 163 TLVSVL 168
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/426 (37%), Positives = 248/426 (58%), Gaps = 3/426 (0%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +IS + + G A +F+ ++++S+ +ML G++ GE++ A+ + D M ++VV
Sbjct: 149 NGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVV 208
Query: 207 SWTVMITGYVKN-ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
SW++MI GY K AR F MP D + +MI G+ KVG +E AR +F+++
Sbjct: 209 SWSIMIDGYGKKMGEVNRARVFFDSMPTRD--LVSWNSMIDGYAKVGEMEVAREIFBKML 266
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
K+ +S++ MI GYA + ++EAL LF M+ ++PD ++V +ACS L L++GR
Sbjct: 267 QKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRW 326
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H+ + RN ++ V A++ MY +CG ++ F + N+VSWN +I +G
Sbjct: 327 IHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGF 386
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
++AL F QM + D + FL +L AC HA V E + +F M VY + P EHY
Sbjct: 387 GKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYG 446
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
CLVD+L RAGQL++ I Q MP + + +WGSLL AC I+ NV L E+ +++ EL
Sbjct: 447 CLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKAD 506
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
+S VYV++SN+YA GMW + R+R LMKE+ + K S IE+ V F+ G+ SH
Sbjct: 507 DSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHIL 566
Query: 566 IDKIHL 571
++I L
Sbjct: 567 REEIEL 572
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 13/371 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV N IS R G+ AR +FD + KD+++WN+++ GY G ++ ++N+F MP
Sbjct: 145 VFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPE 204
Query: 110 KNIVSWNCMIAGCIDN-DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
+++VSW+ MI G ++ A +F +MP R+ ++N+MI G+ K G +E A +F++
Sbjct: 205 RDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBK 264
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE-- 226
M ++NVIS++ M+DG+ + +A L M + + V + G V A +
Sbjct: 265 MLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQG 324
Query: 227 ----LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
L+ + ++ V TA++ + K G + AR +F + ++ VS+N MI G N
Sbjct: 325 RWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMN 384
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG---FEANV 339
G +EAL F M + DD + V ACS L+ EG H+ G E +
Sbjct: 385 GFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGL--HIFNQMKGVYRLEPKL 442
Query: 340 SVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
++ + R G + + + + PN W +++ A H + A I ++
Sbjct: 443 EHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAE 502
Query: 399 NGFDPDGITFL 409
D G+ L
Sbjct: 503 LKADDSGVYVL 513
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 189/618 (30%), Positives = 315/618 (50%), Gaps = 94/618 (15%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTK---DVITWNAIITGYWQNGFLQESKNLFQS 106
VF+ NA ++ SR G + A +FD++T + DVI+WN+I++ + ++ + +LF
Sbjct: 197 VFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSK 256
Query: 107 MPVKNIVSWNCMIAGCIDNDRID--------DAFDYFQAMPE---------RNTA----- 144
M + ++ N+R D A +A+P+ RN
Sbjct: 257 MTL--------IVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVF 308
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
NA+I + K G +E A ++F M ++V+S+ AM+ G+ + G + A L M +N
Sbjct: 309 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN 368
Query: 205 ----VVSWTVMITGYVKNERFC--EARELFYRM------PD------------------- 233
VV+WT +I GY ++R C EA LF +M P+
Sbjct: 369 IPLDVVTWTAVIAGY--SQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQ 426
Query: 234 ----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERI--QPKDC 269
D+++ V A+I + K + AR +F+ I + ++
Sbjct: 427 GTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNV 486
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIK--MDMQPDDATLVSVFTACSALQLLNEGRQSH 327
V++ MI G+AQ G + +AL+LF MI + P+ T+ + AC+ L + G+Q H
Sbjct: 487 VTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIH 546
Query: 328 VLVIRNG-FEANVS-VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
V+R+ +E++ V N +I MYS+CG + + F + + +SW +++ + HG
Sbjct: 547 AYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGR 606
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+AL F +M GF PD ITFL +L AC H G V++ + F+ M YG+ P +EHY
Sbjct: 607 GSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYA 666
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C +D+L+R+G+L+KAW+ + MP E VW +LL+AC ++ NVEL E A K+ E++ +
Sbjct: 667 CAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE 726
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
N Y ++SN+YA AG W+DV R+R LMK+ G+ K+ SW++ F GD SHP
Sbjct: 727 NDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPL 786
Query: 566 IDKIHLELKRASVQMKSV 583
+I+ L+ ++K++
Sbjct: 787 SPQIYALLESLIDRIKAM 804
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 218/520 (41%), Gaps = 109/520 (20%)
Query: 20 ILRILSTPDSCGNF-----TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
I+ I++ +CG+ T IR + VFV NA I A ++ G + A ++F+
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 331
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDD 130
M KDV++WNA++ GY Q+G + + LF++M +NI V+W +IAG +
Sbjct: 332 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 391
Query: 131 AFDYFQAM----PERNTATYNAMISGFLKHGRLEEATRLFEQMPR--------------R 172
A + F+ M N T +++S G + T + +
Sbjct: 392 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 451
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSF--KNVVSWTVMITGYVKNERFCEARELFYR 230
+++ Y A++D + K AR++ D + +NVV+WTVMI G+ + +A +LF
Sbjct: 452 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 511
Query: 231 M--------PD--------------------------------YDKNV-FVVTAMITGFC 249
M P+ Y+ + FV +I +
Sbjct: 512 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 571
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K G ++ AR +F+ + K +S+ +M+ GY +G EAL +F M K PDD T +
Sbjct: 572 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 631
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
V ACS ++++G L + A+ + +P
Sbjct: 632 VLYACSHCGMVDQG-----LSYFDSMSADYGL-------------------------TPR 661
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ I A+ G +KA M + +P + +++LLSAC +V+ +++L E
Sbjct: 662 AEHYACAIDLLARSGRLDKAWRTVKDMPM---EPTAVVWVALLSAC----RVHSNVELAE 714
Query: 430 LMVK--VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+ V + YT + +I + AG+ + +I M
Sbjct: 715 HALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLM 754
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 11/269 (4%)
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
T ++ + G + A L+ ER+ P V +N +I + + G + A+ + M++ +
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD TL V AC L G H L+ NGFE+NV +CNA++ MYSRCG + ++ +
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 219
Query: 362 FRQIHS---PNLVSWNTIIAAFAQHGHYEKALIFFSQMGL------NGFDPDGITFLSLL 412
F +I +++SWN+I++A + + AL FS+M L D I+ +++L
Sbjct: 220 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 279
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
ACG V ++ ++ ++ G P L+D ++ G +E A ++ M F+ D
Sbjct: 280 PACGSLKAVPQTKEVHGNAIR-NGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK-D 337
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRE 501
W +++A + N E K MR+
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRK 366
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 15/157 (9%)
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
S+ V+ Y CG + L ++ V WN +I + G + A+ +M
Sbjct: 97 SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 156
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP----SSEHYTC--LVDILSR 453
G PD T +L ACG + + +G+I S + C LV + SR
Sbjct: 157 GTRPDHFTLPHVLKACG-------ELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSR 209
Query: 454 AGQLEKAWQITQGMPFEA--DTGVWGSLLAACVINLN 488
G LE+A I + D W S+++A V + N
Sbjct: 210 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSN 246
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/578 (29%), Positives = 305/578 (52%), Gaps = 45/578 (7%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
+V+ N + A + +S A +L M V+++N I++GY++ G + E+ LF
Sbjct: 49 HVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTS 108
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMIS----GFLKH---- 156
++ SWN +++GC+ N ++ + +F M + TY +I GF +
Sbjct: 109 KRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCCDLGFGQQVHAD 168
Query: 157 -----------------------GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
G + +A ++F+ MP R ++++ AM+ + K G DK+
Sbjct: 169 IVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKS 228
Query: 194 RALSDYMSFKNV----VSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITG 247
L + + + ++ +++ + + EA ++ + + + + F A++
Sbjct: 229 IGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNL 288
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K G + +A LFE I +D VS+ +I G+ Q+G EEA+ LF M D++P+ T
Sbjct: 289 YSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTF 348
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGF-EANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+ AC+ +GR H LV++ G A+V V +AV+ MYS+CG + D+ AF+++
Sbjct: 349 GGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMP 408
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQM---GLNGFDPDGITFLSLLSACGHAGKVNE 423
++ SWN II +AQ+G KAL +++M G +G P+ +TF+ +L AC H G + E
Sbjct: 409 ERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKE 468
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
F+ MV + I P++EHYTC+VD+L RAG L++A + +P + D +WG+LL AC
Sbjct: 469 GYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGAC 528
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
++ +V++ A+ + +P+NS+ YV+L+N Y G W + +R +M+ +GV K
Sbjct: 529 KLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEKTAG 588
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
SW+EIG +H FL GD HP I+ L R +QM+
Sbjct: 589 CSWVEIGTCMHSFLAGDXLHPQIEVASQVLPRLYLQMR 626
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 193/386 (50%), Gaps = 9/386 (2%)
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+L ++ + ++ N ++ I++ + DA MP+ + +YN ++SG+ K G + E
Sbjct: 40 SLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGLVSE 99
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVK 217
A +LF+ +R+ S+ +L G +K ++ L+ +M + ++T I
Sbjct: 100 AIKLFDGTSKRDCHSWNIVLSGCVKNHKL--GEGLTHFMKMRCSSVRPDNFTYAIIIPCC 157
Query: 218 NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ F + D + F+ T ++ + +VG + +AR +F+ + + V++NAMI+
Sbjct: 158 DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMIS 217
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
Y++ G ++++ LF + + + D+ T V +A + E Q H L+I GF +
Sbjct: 218 CYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCS 277
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ NA++ +YS+CG + + F +I ++VSW II F Q GH E+A+ F QM
Sbjct: 278 DRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQ 337
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDILSRAGQ 456
L +P+ TF LL AC A + L++K +G++ + + +VD+ S+ G+
Sbjct: 338 LGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLK-FGLLGADVVVGSAVVDMYSKCGE 396
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAA 482
+ A + Q MP E D W ++
Sbjct: 397 MGDALRAFQEMP-ERDIASWNGIICG 421
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 179/366 (48%), Gaps = 24/366 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++++ S F+ + + G+I AR++FD M ++ ++TWNA+I+ Y + G +S
Sbjct: 169 IVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKS 228
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP------ER----NTATYNAMI 150
LF+ + + I + A I + + F+AM ER + T NA++
Sbjct: 229 IGLFRQLXREGISADEYTYA--IVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALV 286
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF----KNVV 206
+ + K G + A+RLFE++P ++V+S+T ++ GF++ G +++A L M N
Sbjct: 287 NLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSF 346
Query: 207 SWTVMITGYVKNERFCEARE---LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
++ ++ F + R L + +V V +A++ + K G + +A F+
Sbjct: 347 TFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQE 406
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM---DMQPDDATLVSVFTACSALQLL 320
+ +D S+N +I GYAQNG +AL+L++ M+ + + P++ T V V ACS LL
Sbjct: 407 MPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLL 466
Query: 321 NEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSE-LAFRQIHSPNLVSWNTIIA 378
EG +V ++ + ++ + R G + ++E L P+ V W ++
Sbjct: 467 KEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLG 526
Query: 379 AFAQHG 384
A HG
Sbjct: 527 ACKLHG 532
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 141/294 (47%), Gaps = 9/294 (3%)
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
G M K V A + + + +V +++ Y+ ++ +A +L + MP +V
Sbjct: 29 GHMYKAPVLHASLVKNGL-IAHVYQCNILLQAYINSQALSDAHKLLHFMPQ--PSVVSYN 85
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
+++G+ K G++ A LF+ +DC S+N +++G +N E L F M ++P
Sbjct: 86 TILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRP 145
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D+ T + C L G+Q H +++ + + + ++ MY+ G I D+ F
Sbjct: 146 DNFTYAIIIPCCD----LGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVF 201
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+ S LV+WN +I+ ++++G +K++ F Q+ G D T+ +L+ +V
Sbjct: 202 DGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVF 261
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
E+M + L+++ G LV++ S+ G + A ++ + +P + D W
Sbjct: 262 EAMQVHSLIIE-RGFCSDRFTNNALVNLYSKCGYVASASRLFEEIP-DQDVVSW 313
>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 274/448 (61%), Gaps = 6/448 (1%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T T N +++ + K G +E A +LF++MP R+++S+ M+ + G+ +KA L M
Sbjct: 81 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQ 140
Query: 202 FKNVVSWTVMITGYVKN--ERFC--EAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLE 255
+ + ++ V + C E ++L F D NVFV TA++ + K G+++
Sbjct: 141 KEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 200
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A L+FE + + V++++M+AGY QN + EEAL LF M ++ + T+ S +AC+
Sbjct: 201 DASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACA 260
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
A L EG+Q ++ + G +N+ V +++I MY++CG I ++ + F + N+V WN
Sbjct: 261 ARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLWNA 320
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+++ F++H +A+I+F +M G P+ IT++S+L+AC H G V + F+LM++V+
Sbjct: 321 MLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVEKGRKYFDLMIRVH 380
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
+ P+ HY+C+VDIL RAG L +A + MPF+A +WGSLLA+C I N+E E+A
Sbjct: 381 NVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGSLLASCRIYRNLEXAEVA 440
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
AK + E++P N+ +V+LSN+YAA W +V R R L+KE K+ SWIEI +KVH
Sbjct: 441 AKHLFEIEPHNAGNHVLLSNIYAANNRWEEVARARNLLKESKAKKERGKSWIEIKHKVHS 500
Query: 556 FLGGDMSHPCIDKIHLELKRASVQMKSV 583
F+ G+ +HP I +I+L+L+ +MK +
Sbjct: 501 FMVGERNHPRIVEIYLKLEDLVGEMKKI 528
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 176/387 (45%), Gaps = 80/387 (20%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR+ +N ++ S+ G + +AR+LFD+M + +++WN ++ + QNG +++
Sbjct: 73 IIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDSEKA 132
Query: 101 KNLFQSMPVKNI---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS 151
LF M + I V C C+ + F A+ + N A++
Sbjct: 133 LVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTAL-DSNVFVGTALLD 191
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ K G +++A+ +FE MP R SD V+W+ M
Sbjct: 192 VYAKCGLVKDASLVFECMPER------------------------SD-------VTWSSM 220
Query: 212 ITGYVKNERFCEARELFYRM-------------------------------------PDY 234
+ GYV+NE + EA LF+R
Sbjct: 221 VAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGI 280
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
N+FV++++I + K G++E A ++F ++ K+ V +NAM++G++++ + EA+ F
Sbjct: 281 GSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEK 340
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCG 353
M +M + P++ T +SV TACS L L+ +GR+ L+IR + NV + ++ + R G
Sbjct: 341 MQQMGICPNEITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAG 400
Query: 354 GILDS-ELAFRQIHSPNLVSWNTIIAA 379
+ ++ +L R W +++A+
Sbjct: 401 LLHEAKDLIDRMPFDATASMWGSLLAS 427
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
EG H +IR G A+ N ++ MYS+CG + + F ++ +LVSWNT++ +
Sbjct: 65 EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 124
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
Q+G EKAL+ F QM G T S++ AC V E L +K + +
Sbjct: 125 QNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKT-ALDSNV 183
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
T L+D+ ++ G ++ A + + MP +D W S++A V N
Sbjct: 184 FVGTALLDVYAKCGLVKDASLVFECMPERSDV-TWSSMVAGYVQN 227
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/533 (32%), Positives = 283/533 (53%), Gaps = 54/533 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV NA I A + + AR++FD + +DV++W ++ + Y + GF ++ ++F+ M
Sbjct: 113 VFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGW 172
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF-LKHGRLEEATRLFEQ 168
V N M I A E I GF ++HG +
Sbjct: 173 SG-VKPNPMTVSSI-----------LPACAELKDLKSGKEIHGFAVRHGMVV-------- 212
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
N+ +A++ + K V +AR + D M ++VVSW ++T Y KN+ + + LF
Sbjct: 213 ----NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 268
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+M + R D ++NA+I G +NG +EEA
Sbjct: 269 LKMSR---------------------DGVR--------ADEATWNAVIGGCMENGRSEEA 299
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
+ +F M KM +P++ T+ S+ ACS + L G++ H V R+ +++ A++ M
Sbjct: 300 VEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYM 359
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y++CG + S F + ++V+WNT+I A A HG+ ++AL F +M L+ P+ +TF
Sbjct: 360 YAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTF 419
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+LS C H+ V E + +F M + + + P + HY+C+VDI SRAG+L +A++ QGMP
Sbjct: 420 TGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMP 479
Query: 469 FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTR 528
E WG+LLAAC + NVEL +++AKK+ E++P N YV L N+ A MW + ++
Sbjct: 480 MEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQ 539
Query: 529 VRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
VR+LMKE+G+TK SW+++GNKVH F+ GD S+ DKI+ L +MK
Sbjct: 540 VRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMK 592
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 149/314 (47%), Gaps = 34/314 (10%)
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS----YTAMLDGFMK 186
A F +P+ + T + +IS HG EA +++ + R + + A
Sbjct: 31 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 90
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
G+ + + + D + V+S +VFV A+I
Sbjct: 91 SGDALRVKEVHDDATRCGVMS-----------------------------DVFVGNALIH 121
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ K +E AR +F+ + +D VS+ ++ + Y + G + + +F M ++P+ T
Sbjct: 122 AYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMT 181
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+ S+ AC+ L+ L G++ H +R+G N+ VC+A++++Y++C + ++ + F +
Sbjct: 182 VSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMP 241
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
++VSWN ++ A+ ++ YEK F +M +G D T+ +++ C G+ E+++
Sbjct: 242 HRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVE 301
Query: 427 LFELMVKVYGIIPS 440
+F M K+ G P+
Sbjct: 302 MFRKMQKM-GFKPN 314
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 114/242 (47%), Gaps = 2/242 (0%)
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
VG AR LF+ I D + + +I+ +G++ EA++++S + + ++PD ++
Sbjct: 25 VGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAA 84
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
AC+ ++ H R G ++V V NA+I Y +C + + F + ++
Sbjct: 85 AKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDV 144
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
VSW ++ + + + G K + F +MG +G P+ +T S+L AC + ++
Sbjct: 145 VSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGF 204
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
V+ +G++ + + LV + ++ + +A + MP D W +L A N E
Sbjct: 205 AVR-HGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTAYFKNKEYE 262
Query: 491 LG 492
G
Sbjct: 263 KG 264
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 189/618 (30%), Positives = 315/618 (50%), Gaps = 94/618 (15%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTK---DVITWNAIITGYWQNGFLQESKNLFQS 106
VF+ NA ++ SR G + A +FD++T + DVI+WN+I++ + ++ + +LF
Sbjct: 190 VFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSK 249
Query: 107 MPVKNIVSWNCMIAGCIDNDRID--------DAFDYFQAMPE---------RNTA----- 144
M + ++ N+R D A +A+P+ RN
Sbjct: 250 MTL--------IVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVF 301
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
NA+I + K G +E A ++F M ++V+S+ AM+ G+ + G + A L M +N
Sbjct: 302 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN 361
Query: 205 ----VVSWTVMITGYVKNERFC--EARELFYRM------PD------------------- 233
VV+WT +I GY ++R C EA LF +M P+
Sbjct: 362 IPLDVVTWTAVIAGY--SQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQ 419
Query: 234 ----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERI--QPKDC 269
D+++ V A+I + K + AR +F+ I + ++
Sbjct: 420 GTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNV 479
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIK--MDMQPDDATLVSVFTACSALQLLNEGRQSH 327
V++ MI G+AQ G + +AL+LF MI + P+ T+ + AC+ L + G+Q H
Sbjct: 480 VTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIH 539
Query: 328 VLVIRNG-FEANVS-VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
V+R+ +E++ V N +I MYS+CG + + F + + +SW +++ + HG
Sbjct: 540 AYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGR 599
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+AL F +M GF PD ITFL +L AC H G V++ + F+ M YG+ P +EHY
Sbjct: 600 GSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYA 659
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C +D+L+R+G+L+KAW+ + MP E VW +LL+AC ++ NVEL E A K+ E++ +
Sbjct: 660 CAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE 719
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
N Y ++SN+YA AG W+DV R+R LMK+ G+ K+ SW++ F GD SHP
Sbjct: 720 NDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPL 779
Query: 566 IDKIHLELKRASVQMKSV 583
+I+ L+ ++K++
Sbjct: 780 SPQIYALLESLIDRIKAM 797
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 218/520 (41%), Gaps = 109/520 (20%)
Query: 20 ILRILSTPDSCGNF-----TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
I+ I++ +CG+ T IR + VFV NA I A ++ G + A ++F+
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 324
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDD 130
M KDV++WNA++ GY Q+G + + LF++M +NI V+W +IAG +
Sbjct: 325 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 384
Query: 131 AFDYFQAM----PERNTATYNAMISGFLKHGRLEEATRLFEQMPR--------------R 172
A + F+ M N T +++S G + T + +
Sbjct: 385 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 444
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSF--KNVVSWTVMITGYVKNERFCEARELFYR 230
+++ Y A++D + K AR++ D + +NVV+WTVMI G+ + +A +LF
Sbjct: 445 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 504
Query: 231 M--------PD--------------------------------YDKNV-FVVTAMITGFC 249
M P+ Y+ + FV +I +
Sbjct: 505 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 564
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K G ++ AR +F+ + K +S+ +M+ GY +G EAL +F M K PDD T +
Sbjct: 565 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 624
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
V ACS ++++G L + A+ + +P
Sbjct: 625 VLYACSHCGMVDQG-----LSYFDSMSADYGL-------------------------TPR 654
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ I A+ G +KA M + +P + +++LLSAC +V+ +++L E
Sbjct: 655 AEHYACAIDLLARSGRLDKAWRTVKDMPM---EPTAVVWVALLSAC----RVHSNVELAE 707
Query: 430 LMVK--VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+ V + YT + +I + AG+ + +I M
Sbjct: 708 HALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLM 747
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 11/269 (4%)
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
T ++ + G + A L+ ER+ P V +N +I + + G + A+ + M++ +
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD TL V AC L G H L+ NGFE+NV +CNA++ MYSRCG + ++ +
Sbjct: 153 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 212
Query: 362 FRQIHS---PNLVSWNTIIAAFAQHGHYEKALIFFSQMGL------NGFDPDGITFLSLL 412
F +I +++SWN+I++A + + AL FS+M L D I+ +++L
Sbjct: 213 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 272
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
ACG V ++ ++ ++ G P L+D ++ G +E A ++ M F+ D
Sbjct: 273 PACGSLKAVPQTKEVHGNAIR-NGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK-D 330
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRE 501
W +++A + N E K MR+
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRK 359
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 15/157 (9%)
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
S+ V+ Y CG + L ++ V WN +I + G + A+ +M
Sbjct: 90 SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 149
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP----SSEHYTC--LVDILSR 453
G PD T +L ACG + + +G+I S + C LV + SR
Sbjct: 150 GTRPDHFTLPHVLKACG-------ELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSR 202
Query: 454 AGQLEKAWQITQGMPFEA--DTGVWGSLLAACVINLN 488
G LE+A I + D W S+++A V + N
Sbjct: 203 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSN 239
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 293/544 (53%), Gaps = 59/544 (10%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----E 140
N ++ Y + G L SK L S +++V+WN +++ N++ +A +Y + M E
Sbjct: 236 NTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVE 295
Query: 141 RNTATYNAMISG-----FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+ T ++++ L+ G+ A L N +A++D + +V
Sbjct: 296 PDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCR 355
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD---------------------- 233
+ D M + + W MITGY +NE EA LF M +
Sbjct: 356 VFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSG 415
Query: 234 ----------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
D++ FV A++ + ++G ++ A+ +F +++ +D V++N +I
Sbjct: 416 AFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIIT 475
Query: 278 GYAQNGVAEEALRLFSGM-----------IKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
GY + E+AL + M ++ ++P+ TL+++ +C+AL L +G++
Sbjct: 476 GYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEI 535
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H I+N +V+V +A++ MY++CG + S F QI N+++WN I+ A+ HG+
Sbjct: 536 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNS 595
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
+ A+ M + G P+ +TF+S+ +AC H+G VNE + +F M K YG+ PSS+HY C
Sbjct: 596 QDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYAC 655
Query: 447 LVDILSRAGQLEKAWQITQGMPFEAD-TGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
+VD+L RAG++++A+Q+ +P D G W SLL AC I+ N+E+GE+AA+ + +L+P
Sbjct: 656 VVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPN 715
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
++ YV+L+N+Y++AG+W T VR MK QGV K+ SWIE G++VH F+ GD SHP
Sbjct: 716 VASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 775
Query: 566 IDKI 569
+K+
Sbjct: 776 SEKL 779
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 125/253 (49%), Gaps = 5/253 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+V V ++ + K G +F+RI ++ VS+N++I+ E AL F M+
Sbjct: 128 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 187
Query: 297 KMDMQPDDATLVSVFTACSALQL---LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
D++P TLVSV ACS + L G+Q H +R G E N + N ++ MY + G
Sbjct: 188 DEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMG 246
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ S++ +LV+WNT++++ Q+ + +AL + +M L G +PDG T S+L
Sbjct: 247 KLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLP 306
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H + +L +K + +S + LVD+ Q+ ++ GM F+
Sbjct: 307 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGM-FDRKI 365
Query: 474 GVWGSLLAACVIN 486
G+W +++ N
Sbjct: 366 GLWNAMITGYAQN 378
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 180/371 (48%), Gaps = 12/371 (3%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF--MKKGE--VDKARALSDY--- 199
N +++ + K G ++F+++ RN +S+ +++ +K E ++ R + D
Sbjct: 133 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVE 192
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELF-YRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
S +VS + + + E +++ Y + + N F++ ++ + K+G L +++
Sbjct: 193 PSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVAMYGKMGKLASSK 252
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+L + +D V++N +++ QN EAL M+ ++PD T+ SV ACS L+
Sbjct: 253 VLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLE 312
Query: 319 LLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
+L G++ H ++NG + N V +A++ MY C +L F + + WN +I
Sbjct: 313 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMI 372
Query: 378 AAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
+AQ+ + E+AL+ F +M + G + T ++ AC +G ++ + +VK G
Sbjct: 373 TGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVK-RG 431
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
+ L+D+ SR G+++ A +I M + D W +++ V + E L
Sbjct: 432 LDRDRFVQNALMDMYSRLGKIDIAKRIFGKME-DRDLVTWNTIITGYVFSERHEDALLML 490
Query: 497 KKMRELDPQNS 507
KM+ L+ + S
Sbjct: 491 HKMQILERKAS 501
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 211/446 (47%), Gaps = 66/446 (14%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-PV 109
FV +A + ++ + ++FD M + + WNA+ITGY QN + +E+ LF M
Sbjct: 335 FVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEES 394
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEE 161
+++ + +AG + AF +A+ +R+ NA++ + + G+++
Sbjct: 395 AGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDI 454
Query: 162 ATRLFEQMPRRNVISYTAMLDGF------------MKKGEV--DKARALSDYMSFK-NVV 206
A R+F +M R+++++ ++ G+ + K ++ KA + +S K N +
Sbjct: 455 AKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSI 514
Query: 207 SWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
+ ++ + +E+ + + +V V +A++ + K G L+ +R +F++I
Sbjct: 515 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 574
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
++ +++N ++ Y +G +++A+ + M+ ++P++ T +SVF ACS ++NEG
Sbjct: 575 PIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGL 634
Query: 325 QSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+ + ++ G E + V+ + R G + + A++ I NL+ N
Sbjct: 635 KIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKE---AYQLI---NLIPRN--------- 679
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-VYGIIPS-S 441
FD G + SLL AC +++ ++++ E+ + + + P+ +
Sbjct: 680 -----------------FDKAG-AWSSLLGAC----RIHNNLEIGEIAAQNLIQLEPNVA 717
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGM 467
HY L +I S AG KA ++ + M
Sbjct: 718 SHYVLLANIYSSAGLWYKATEVRRNM 743
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
++ ++ + EA+ + MI + ++PD+ ++ A + LQ ++ G+Q H V + G
Sbjct: 64 LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123
Query: 335 FEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
+ + V+V N ++ +Y +CG F +I N VSWN++I++ +E AL F
Sbjct: 124 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 183
Query: 394 SQMGLNGFDPDGITFLSLLSACGH 417
M +P T +S+ AC +
Sbjct: 184 RCMLDEDVEPSSFTLVSVALACSN 207
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V +A + ++ G + +R++FDQ+ ++VITWN I+ Y +G Q++ ++ + M V
Sbjct: 548 VAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMV 607
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLE 160
+ N V++ + A C + +++ F M E ++ Y ++ + GR++
Sbjct: 608 QGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVK 667
Query: 161 EATRLFEQMPR 171
EA +L +PR
Sbjct: 668 EAYQLINLIPR 678
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 265/474 (55%), Gaps = 38/474 (8%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N ++ + K G L +A LF++M R++ S+ M+ G+ K G +++AR L D M ++
Sbjct: 126 NRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNF 185
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDK---NVF------------------------ 239
SW I+GYV + + EA ELF M +++ N F
Sbjct: 186 SWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGY 245
Query: 240 -----------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
V +A++ + K G L+ AR +F++++ +D VS+ MI ++G EE
Sbjct: 246 LIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEG 305
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
LF +++ ++P++ T V AC+ + G++ H ++ G++ +A++ M
Sbjct: 306 FLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHM 365
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
YS+CG + F ++H P+LVSW ++I +AQ+G ++AL FF + +G PD +T+
Sbjct: 366 YSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTY 425
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+ +LSAC HAG V++ ++ F + + +G++ +++HY C++D+L+R+G+ ++A I MP
Sbjct: 426 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMP 485
Query: 469 FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTR 528
+ D +W SLL C I+ N+EL + AAK + E++P+N A Y+ L+N+YA AG+W +V
Sbjct: 486 VKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVAN 545
Query: 529 VRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
VR M G+ K+ SWIEI +VH FL GD SHP IH L S ++K
Sbjct: 546 VRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKE 599
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 196/420 (46%), Gaps = 53/420 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF++N + ++ G + A+ LFD+M +D+ +WN +I GY + G L++++ LF MP
Sbjct: 122 VFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQ 181
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF----------LKHGRL 159
++ SWN I+G + +++ +A + F+ M ++ N L+ G+
Sbjct: 182 RDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKE 241
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
+ ++ V+ ++A+LD + K G +D+AR + D M ++VVSWT MI ++
Sbjct: 242 IHGYLIRTELNLDEVV-WSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDG 300
Query: 220 RFCEARELFYRM------PD-------------------------------YDKNVFVVT 242
R E LF + P+ YD F ++
Sbjct: 301 RREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAIS 360
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
A++ + K G AR +F + D VS+ ++I GYAQNG +EAL F +++ +P
Sbjct: 361 ALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKP 420
Query: 303 DDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
D T V V +AC+ L+++G + H + ++G VI + +R G ++E
Sbjct: 421 DQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENI 480
Query: 362 FRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG-ITFLSLLSACGHAG 419
+ P+ W +++ HG+ E L + L +P+ T+++L + +AG
Sbjct: 481 IDNMPVKPDKFLWASLLGGCRIHGNLE--LAKRAAKALYEIEPENPATYITLANIYANAG 538
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 34/281 (12%)
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
VF+ ++ + K G L +A++LF+ + +D S+N MI GYA+ G E+A +LF M +
Sbjct: 122 VFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQ 181
Query: 298 MD--------------------------MQPDDATLVSVFT------ACSALQLLNEGRQ 325
D MQ + + + FT A +A+ L G++
Sbjct: 182 RDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKE 241
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H +IR + V +A++ +Y +CG + ++ F Q+ ++VSW T+I + G
Sbjct: 242 IHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGR 301
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E+ + F + +G P+ TF +L+AC + ++ M+ G P S +
Sbjct: 302 REEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHA-GYDPGSFAIS 360
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LV + S+ G A ++ M + D W SL+ N
Sbjct: 361 ALVHMYSKCGNTRVARRVFNEM-HQPDLVSWTSLIVGYAQN 400
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 264 IQPKDCVS----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+ PKD VS F + Q +EA+ L + D +P ++ AC +
Sbjct: 46 LNPKDLVSEDNKFEEAVDVLCQQKRVKEAVELLH---RTDHRPSARVYSTLIAACVRHRA 102
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L GR+ H + F V + N ++ MY++CG ++D+++ F ++ +L SWNT+I
Sbjct: 103 LELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVG 162
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+A+ G E+A F +M D ++ + +S + E+++LF +M +
Sbjct: 163 YAKLGRLEQARKLFDEMPQR----DNFSWNAAISGYVTHNQPREALELFRVMQR 212
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 191/621 (30%), Positives = 298/621 (47%), Gaps = 119/621 (19%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNC 117
+ G + +A +FD M ++D ++WN +I G+ G + F+ V N+ +
Sbjct: 96 KTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVL 155
Query: 118 MIAGC-----------------------------------IDNDRIDDAFDYFQAMPERN 142
I C DND ++ A + F M ER+
Sbjct: 156 AIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERD 214
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRR-----NVISYTAMLDGFMKKGEVDKARALS 197
+++ MI G+++ G + A +LF +M + I+ ++L G++ R++
Sbjct: 215 VISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVH 274
Query: 198 --------DY---------------------------MSFKNVVSWTVMITGYVKNERFC 222
DY M +N VSW +I+G V+ E+
Sbjct: 275 GVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHS 334
Query: 223 EARELFYRMPD-------------------------------------YDKNVFVVTAMI 245
EA LFY M Y+ N FV+ ++I
Sbjct: 335 EALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLI 394
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K ++E A LF+R++ KD VS++AMIAG+ G +EA+ LF M + +P+
Sbjct: 395 DAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGV 454
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T++S+ A S L + +H + IR G A V+V A++ MY++CG I S AF QI
Sbjct: 455 TILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQI 514
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
N+VSW +IAA +G AL S+M L+G P+ +T LS+LSAC H G V E +
Sbjct: 515 PEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGL 574
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP--FEADTGVWGSLLAAC 483
FE MV+ +G+ P EHY+C+VD+LSRAG+L A + + MP G+WG+LL+AC
Sbjct: 575 SFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSAC 634
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
+ N LG AA ++ EL+PQ+SA Y + S++YAA+G+W D R+R L+K +GV
Sbjct: 635 RSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAG 694
Query: 544 YSWIEIGNKVHYFLGGDMSHP 564
YS + + +K F+ GD SHP
Sbjct: 695 YSLVHVEDKAWRFVAGDESHP 715
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 226/505 (44%), Gaps = 60/505 (11%)
Query: 62 RAGK---ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCM 118
R GK S +Q FD +T+ T N+++ Y + G L + +F SM ++ VSWN M
Sbjct: 66 RHGKSIHASLLKQGFDSLTS----TGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIM 121
Query: 119 IAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
I G + D +F+ E N +T I G +EE ++ + R
Sbjct: 122 IHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGF 181
Query: 175 ISYTAMLDGFMK---KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
+ ++ + + ++++A L D M ++V+SW+VMI GYV+ A +LF M
Sbjct: 182 LDIPSVQNSLLSMYADNDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEM 241
Query: 232 P----------------------------------------DYDKNVFVVTAMITGFCKV 251
DYD +FV ++I + K
Sbjct: 242 TSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYD--LFVGNSIIDMYSKC 299
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
E+A F + ++ VS+N++I+G + EAL LF M K + D+ TLV++
Sbjct: 300 DDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLL 359
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
+C + + H +VIR G+E N V N++I YS+C I + F ++ + + V
Sbjct: 360 QSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTV 419
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SW+ +IA F G ++A+ F +M P+G+T LSLL A + + S +
Sbjct: 420 SWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIA 479
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN--LNV 489
++ G+ T ++D+ ++ G++ + + +P E + WG+++AAC +N
Sbjct: 480 IR-RGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIP-EKNIVSWGAMIAACGMNGLARD 537
Query: 490 ELGELAAKKMRELDPQNSAVYVMLS 514
L L+ K+ L P +LS
Sbjct: 538 ALALLSEMKLHGLKPNVVTTLSVLS 562
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 156/326 (47%), Gaps = 25/326 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV N+ I S+ +A + F++M ++ ++WN+II+G + E+ +LF SM
Sbjct: 286 LFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGK 345
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM----------PERNTATYNAMISGFLKHGRL 159
+ + + + + D FQ E N N++I + K +
Sbjct: 346 AGFRADEVTLVNLLQSCKY--FVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLI 403
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS----FKNVVSWTVMITGY 215
E A +LF+++ ++ +S++AM+ GF G+ D+A AL M+ N V+ ++ +
Sbjct: 404 ELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAF 463
Query: 216 -----VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+K ++ + + V V TA++ + K G + +R F++I K+ V
Sbjct: 464 SVSADLKRSKWAHGIAIRRGLA---AEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIV 520
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVL 329
S+ AMIA NG+A +AL L S M ++P+ T +SV +ACS L+ EG +
Sbjct: 521 SWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENM 580
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGI 355
V +G E + + ++ M SR G +
Sbjct: 581 VQDHGVEPGLEHYSCMVDMLSRAGKL 606
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 287 EALRLFSGMIKMDMQPDDATLV-SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EA + M K Q D TLV S+ ACS+L + G+ H +++ GF++ S N+V
Sbjct: 32 EACSRYHQMKKAGAQLTDPTLVHSILKACSSLPV-RHGKSIHASLLKQGFDSLTSTGNSV 90
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ Y + G + + F + S + VSWN +I G +K L +F Q + F+P+
Sbjct: 91 LDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNV 150
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVK 433
T + + AC G + E + + +++
Sbjct: 151 STLVLAIHACRSLGAMEEGLKMHGYIIR 178
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR V V A + ++ G+I +R+ FDQ+ K++++W A+I NG +++
Sbjct: 480 IRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDAL 539
Query: 102 NLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAM-----PERNTATYNAMISG 152
L M + N+V+ +++ C +++ +F+ M E Y+ M+
Sbjct: 540 ALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDM 599
Query: 153 FLKHGRLEEATRLFEQMPRR 172
+ G+L A L E+MP R
Sbjct: 600 LSRAGKLNSAMNLIEKMPER 619
>gi|354805159|gb|AER41579.1| CRR4 [Oryza brachyantha]
Length = 626
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/443 (35%), Positives = 256/443 (57%), Gaps = 2/443 (0%)
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
C R+ A F M +R+ ++N++I ++ G A LFE MP RNV+S+ ++
Sbjct: 153 CGGPGRVAAARQVFDEMVDRDVVSWNSIIGVYMSSGDYTGAMELFEAMPERNVVSWNTLV 212
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
GF + G++ A+ + D M +N +SW +MI+GY + AR +F RM D K+V
Sbjct: 213 AGFARVGDMVTAQTVFDRMPSRNAISWNLMISGYASSGDVEAARSMFDRM-DQKKDVVSW 271
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS-GMIKMDM 300
TAM++ + K+G L+ A+ LF+ + K+ VS+NAMI GY N EALR F M++
Sbjct: 272 TAMVSAYAKIGDLDTAKELFDHMPLKNLVSWNAMITGYNHNSRYGEALRTFQLMMLEGRF 331
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+PD+ATLVSV +AC+ L + + ++ +++ NA+I M+++CG + ++
Sbjct: 332 RPDEATLVSVVSACAQLGSVEYCNWISSFIRKSNVHLTIALGNALIDMFAKCGDVGRAQS 391
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++ + +++W T+I+ FA +G +AL+ ++ M G + D + F++ L+AC H G
Sbjct: 392 IFYEMKTRCIITWTTMISGFAFNGLCREALLVYNNMCREGVELDDMVFIAALAACVHGGL 451
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ E +F MV+ Y I P EHY C+VD+L RAG L++A + MP E +W +LL
Sbjct: 452 LQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQEAVLFIESMPLEPSVVIWATLL 511
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
++CV + N E + +KK+ EL+P NS+ V++SN A G W V R +M+ G+ K
Sbjct: 512 SSCVAHGNAEFIDYVSKKITELEPFNSSYQVLVSNSSALEGRWDGVIGARTIMRNWGIEK 571
Query: 541 QCAYSWIEIGNKVHYFLGGDMSH 563
S I++G++VH FL D H
Sbjct: 572 VPGSSSIQVGSEVHEFLAKDTMH 594
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 202/401 (50%), Gaps = 48/401 (11%)
Query: 35 PHSSNC----LIRLFSTQYVFVNNAKISALSR---AGKISAARQLFDQMTTKDVITWNAI 87
P C ++R VFV N + R G+++AARQ+FD+M +DV++WN+I
Sbjct: 121 PRPCRCVHGQIVRWGFGSEVFVQNTLLDVYYRCGGPGRVAAARQVFDEMVDRDVVSWNSI 180
Query: 88 ITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN 147
I Y +G + LF++MP +N+VSWN ++AG + A F MP RN ++N
Sbjct: 181 IGVYMSSGDYTGAMELFEAMPERNVVSWNTLVAGFARVGDMVTAQTVFDRMPSRNAISWN 240
Query: 148 AMISGFLKHGRLEEATRLFEQM-PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
MISG+ G +E A +F++M +++V+S+TAM+ + K G++D A+ L D+M KN+V
Sbjct: 241 LMISGYASSGDVEAARSMFDRMDQKKDVVSWTAMVSAYAKIGDLDTAKELFDHMPLKNLV 300
Query: 207 SWTVMITGYVKNERFCEARELFYRM-------PDYDKNVFVVT----------------- 242
SW MITGY N R+ EA F M PD V VV+
Sbjct: 301 SWNAMITGYNHNSRYGEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSF 360
Query: 243 --------------AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
A+I F K G + A+ +F ++ + +++ MI+G+A NG+ EA
Sbjct: 361 IRKSNVHLTIALGNALIDMFAKCGDVGRAQSIFYEMKTRCIITWTTMISGFAFNGLCREA 420
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVIT 347
L +++ M + ++ DD ++ AC LL EG + +V + + + V+
Sbjct: 421 LLVYNNMCREGVELDDMVFIAALAACVHGGLLQEGWSIFNEMVEQYNIQPRMEHYGCVVD 480
Query: 348 MYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYE 387
+ R G + ++ L + P++V W T++++ HG+ E
Sbjct: 481 LLGRAGNLQEAVLFIESMPLEPSVVIWATLLSSCVAHGNAE 521
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 16/220 (7%)
Query: 270 VSFNAMIAGYA----QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
VS N +I A V +AL ++ M+ + P+ T + AC+ L R
Sbjct: 67 VSHNTLIERLAGARGHRPVPADALAAYTAMLAAGVPPNGFTFTFLLRACALLGFPRPCRC 126
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGG---ILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
H ++R GF + V V N ++ +Y RCGG + + F ++ ++VSWN+II +
Sbjct: 127 VHGQIVRWGFGSEVFVQNTLLDVYYRCGGPGRVAAARQVFDEMVDRDVVSWNSIIGVYMS 186
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G Y A+ F M + + +++ +L++ G + + +F+ M I
Sbjct: 187 SGDYTGAMELFEAMP----ERNVVSWNTLVAGFARVGDMVTAQTVFDRMPSRNAI----- 237
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ ++ + +G +E A + M + D W ++++A
Sbjct: 238 SWNLMISGYASSGDVEAARSMFDRMDQKKDVVSWTAMVSA 277
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 238/426 (55%), Gaps = 38/426 (8%)
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY------------------ 234
A L D +S +N+ W VMI GY N + A L+Y+M DY
Sbjct: 55 AHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSA 114
Query: 235 -------------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ +VFV A+I + K G +E+AR +F++I +D V +N+M
Sbjct: 115 LSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSM 174
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
+A Y+QNG +E+L L M ++P + T V A + LL +G++ H R+GF
Sbjct: 175 LATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGF 234
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E+N V A++ MY++ G + + F + +VSWN +I +A HGH +AL F +
Sbjct: 235 ESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKE 294
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M PD ITF+ +L+AC H G +NE F M+ + I P+ +HYTC++D+L G
Sbjct: 295 MK-GKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCG 353
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+LE+A+++ M E D GVWG+LL +C I+ NVE+GELA +K+ EL+P + YV+LSN
Sbjct: 354 RLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSN 413
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+YA AG W V R+R LM +G+ K A SWIE+GNKVH FL D SHP + I+ ELKR
Sbjct: 414 MYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKR 473
Query: 576 ASVQMK 581
MK
Sbjct: 474 TGKLMK 479
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 122/224 (54%), Gaps = 1/224 (0%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N + T ++ +C L NA LLF+RI ++ +N MI GYA NG E A+ L+ M
Sbjct: 35 NPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMR 94
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ PD T V ACSAL + EG++ H VIR+G E++V V A+I MY++CG +
Sbjct: 95 DYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVE 154
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F +I ++V WN+++A ++Q+G +++L M NG P TF+ ++A
Sbjct: 155 SARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASA 214
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
G + + +L + +G + + T L+D+ +++G + A
Sbjct: 215 DNGLLPQGKELHGYSWR-HGFESNDKVKTALMDMYAKSGSVNVA 257
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 186/384 (48%), Gaps = 20/384 (5%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAG 121
++ A LFD+++ +++ WN +I GY NG + + +L+ M V + ++ ++
Sbjct: 52 LTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKA 111
Query: 122 CIDNDRIDDA----FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
C +++ D ++ E + A+I + K G +E A ++F+++ R+V+ +
Sbjct: 112 CSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCW 171
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGYVKNERFCEAREL--FYRM 231
+ML + + G+ D++ AL M+F + ++ + I N + +EL +
Sbjct: 172 NSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWR 231
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
++ N V TA++ + K G + AR LFE ++ K VS+NAMI GYA +G A EAL L
Sbjct: 232 HGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDL 291
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYS 350
F M K + PD T V V ACS LLNEG+ +I + V +I +
Sbjct: 292 FKEM-KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLG 350
Query: 351 RCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP-DGITF 408
CG + ++ +L P+ W ++ + HG+ E + + L +P DG +
Sbjct: 351 HCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEK--LVELEPDDGGNY 408
Query: 409 LSLLSACGHAGKVNESMDLFELMV 432
+ L + AGK + L +LM+
Sbjct: 409 VILSNMYAQAGKWDGVARLRDLMM 432
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 29/289 (10%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F+ +V + +SA+ KI + + DV A+I Y + G ++ ++ +F
Sbjct: 103 FTFPFVLKACSALSAMEEGKKIH--KDVIRSGLESDVFVGAALIDMYAKCGCVESARQVF 160
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLE 160
+ +++V WN M+A N + D++ + M + T+ I+ +G L
Sbjct: 161 DKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLP 220
Query: 161 EATRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
+ L R S TA++D + K G V+ AR+L + + K VVSW MITGY
Sbjct: 221 QGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYA 280
Query: 217 KNERFCEARELFYRM-----PDYDKNVFVVTAMITGFCKVGMLENARLLFE------RIQ 265
+ EA +LF M PD+ V V+ A G G+L ++ F I
Sbjct: 281 MHGHANEALDLFKEMKGKVLPDHITFVGVLAACSHG----GLLNEGKMHFRSMISDFNIW 336
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
P + MI G EEA +L +++M ++PD ++ +C
Sbjct: 337 PT-VQHYTCMIDLLGHCGRLEEAYKL---IMEMRVEPDAGVWGALLHSC 381
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 136/330 (41%), Gaps = 73/330 (22%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A I ++ G + +ARQ+FD++ +DV+ WN+++ Y QNG ES L + M
Sbjct: 137 VFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAF 196
Query: 110 KNI----------------------------VSWNCMIAGCIDNDRIDDAF--------- 132
+ SW G ND++ A
Sbjct: 197 NGLKPTEGTFVISIAASADNGLLPQGKELHGYSWR---HGFESNDKVKTALMDMYAKSGS 253
Query: 133 -----DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR---NVISYTAML--- 181
F+ + E+ ++NAMI+G+ HG EA LF++M + + I++ +L
Sbjct: 254 VNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLPDHITFVGVLAAC 313
Query: 182 --DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM---PDYDK 236
G + +G++ +SD+ + V +T MI R EA +L M PD
Sbjct: 314 SHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAG- 372
Query: 237 NVFVVTAMITGFCKV-GMLENARLLFER---IQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
V + CK+ G +E L E+ ++P D ++ + YAQ G + RL
Sbjct: 373 ----VWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLR 428
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNE 322
M+ ++ ACS +++ N+
Sbjct: 429 DLMMNKGLKKS--------IACSWIEVGNK 450
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
S+ +C + + G+Q H + + G N + ++ +Y C + ++ L F +I
Sbjct: 6 SLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKR 65
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
NL WN +I +A +G YE A+ + QM G PD TF +L AC + E +
Sbjct: 66 NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ +++ G+ L+D+ ++ G +E A Q+ + E D W S+LA
Sbjct: 126 KDVIRS-GLESDVFVGAALIDMYAKCGCVESARQVFDKID-ERDVVCWNSMLA 176
>gi|255551609|ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/611 (30%), Positives = 299/611 (48%), Gaps = 78/611 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F +KISAL +G I AR+LFD+M +D + WN++IT Y Q GF QE+ ++F M
Sbjct: 5 LFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMRN 64
Query: 110 KNI----VSWNCMIAGC--------------------------IDNDRID------DAFD 133
N ++ ++ C ++N ID DAF
Sbjct: 65 TNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAFS 124
Query: 134 ---YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
F+ M + N ++ +++ + GR EA+ +F MPR+ I++ M+ G + GE+
Sbjct: 125 AGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGEI 184
Query: 191 ----DKARALSDYMSFKNVVSWTVMITGYVKNERFC------------------EAR--- 225
D R + + + + +++ +I+ ++ F EA+
Sbjct: 185 ELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSI 244
Query: 226 -ELFYRMPDYDKNVFVV-----------TAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
L+ + + + VV A+I + KVG + A L+F+ + K+ VS+
Sbjct: 245 LSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWT 304
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+MI GYA+NG EEALR F M PDD T +V ACS+L +L GR H IRN
Sbjct: 305 SMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIRN 364
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GF + V N ++ MY++CG + S LAF I + +LVS+N ++ AF HG +AL +
Sbjct: 365 GFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASEALQLY 424
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
M G PD +TF+ LL C H+G + E F M V+G+ ++H C+VD+L R
Sbjct: 425 EDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVDMLGR 484
Query: 454 AGQLEKAWQITQGMPFEADTGVWG--SLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
G L +A ++ + +D +LL AC + VE+G K ++ L+P YV
Sbjct: 485 GGYLAEAKELVKKYSKTSDVEASSCEALLGACSAHGEVEMGTYLGKTLKTLEPNKEISYV 544
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHL 571
+ SNLY G W++ VR M ++G+ K SWIE+ NKV F+ G+ +P D+++
Sbjct: 545 LQSNLYCVRGQWKEAEMVRKAMVDEGLKKMPGCSWIEVRNKVTAFVAGNHLYPYTDELYK 604
Query: 572 ELKRASVQMKS 582
L +M+S
Sbjct: 605 TLYFLEFEMRS 615
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 32/260 (12%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N+F +T+ I+ G + +AR LF+ + +D V++N+MI Y+Q G +EAL +F M
Sbjct: 4 NLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMR 63
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ +PD T + +AC+ G + H LVI G+ +++ V N++I MY +C
Sbjct: 64 NTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAF 123
Query: 357 DSELAFRQIHSPNLVS-------------------------------WNTIIAAFAQHGH 385
+ F+++ N VS WNT+IA ++G
Sbjct: 124 SAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGE 183
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E L F +M + +PD T+ +L+SAC + + L L+++ G + E
Sbjct: 184 IELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRS-GWSSAMEAKN 242
Query: 446 CLVDILSRAGQLEKAWQITQ 465
++ + ++ G L A ++ +
Sbjct: 243 SILSLYAKFGSLNDALKVVE 262
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
C IR + Y++V N ++ ++ G + + F + KD++++NA++ + +G
Sbjct: 359 GCAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKAS 418
Query: 99 ESKNLFQSMPV----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA-----M 149
E+ L++ M + +++ ++ C + I++ +F +M + +Y A M
Sbjct: 419 EALQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACM 478
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVI---SYTAMLDGFMKKGEVDKARAL 196
+ + G L EA L ++ + + + S A+L GEV+ L
Sbjct: 479 VDMLGRGGYLAEAKELVKKYSKTSDVEASSCEALLGACSAHGEVEMGTYL 528
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 299/552 (54%), Gaps = 18/552 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF N + A ++ KI ARQLFD+ D +++N +I+GY + LF+ M
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRE 133
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEAT 163
+ + +IA C D + F + ++ NA ++ + K G L EA
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 164 RLFEQMPR-RNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKN 218
+F M R+ +S+ +M+ + + E KA AL M FK ++ + ++
Sbjct: 194 SVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL 253
Query: 219 ERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGM---LENARLLFERIQPKDCVSFN 273
+ R+ ++ + +N V + +I + K G + ++ +F+ I D V +N
Sbjct: 254 DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWN 313
Query: 274 AMIAGYAQNGV-AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
MI+GY+ N +EEA++ F M ++ +PDD + V V +ACS L ++G+Q H L I+
Sbjct: 314 TMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIK 373
Query: 333 NGFEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ +N +SV NA+I++Y + G +LD+ F ++ N VS+N +I +AQHGH +AL
Sbjct: 374 SNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALR 433
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
+ +M +G P+ ITF+++LSAC H GKV+E F M + + I P +EHY+C++D+L
Sbjct: 434 LYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLL 493
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
RAG+LE+A + MP++ + W +LL AC + N+ L E AAK++ + P + YV
Sbjct: 494 GRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYV 553
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHL 571
ML+N+YA AG W ++ VR M+ + + K+ SWIE+ K H F+ D SHP I +++
Sbjct: 554 MLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNE 613
Query: 572 ELKRASVQMKSV 583
L+ +MK V
Sbjct: 614 YLEEMMKKMKKV 625
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E NV N ++ Y++ I + F + P+ VS+NT+I+ +A A++ F +
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKR 130
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M GF+ DG T L++AC + + + F + G S V S+ G
Sbjct: 131 MRELGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSG---GFDSYSSVNNAFVTYYSKGG 187
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAA 482
L +A + GM D W S++ A
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVA 214
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 189/620 (30%), Positives = 315/620 (50%), Gaps = 66/620 (10%)
Query: 34 TPHSSNCLIRLFSTQYVFVNNAKISALSR--AGKISA--ARQLFDQMTTK----DVITWN 85
+PH + +LF + ++ L + A ++S RQL + DV N
Sbjct: 85 SPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRN 144
Query: 86 AIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT 145
++ Y G + ++ +F+ PV ++VSWN ++AG + +++A F+ MPERNT
Sbjct: 145 TLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIA 204
Query: 146 YNAMISGFLKHGRLEEATRLFEQMP--RRNVISYTAMLDGFMKK--GE------------ 189
N+MI+ F + G +E+A R+F + R+++S++AM+ + + GE
Sbjct: 205 SNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGS 264
Query: 190 ---------------------VDKAR---------ALSDYMSFKNVVSWTVMITGYVKNE 219
V+ R + DY+S KN +I Y
Sbjct: 265 GVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNA-----LIHLYSSCG 319
Query: 220 RFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+AR +F D + + +++ +MI+G+ + G +++A +LF + KD VS++AMI+
Sbjct: 320 EIVDARRIF---DDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMIS 376
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
GYAQ+ EAL LF M ++PD+ LVS +AC+ L L+ G+ H + RN +
Sbjct: 377 GYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQV 436
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
NV + +I MY +CG + ++ F + + +WN +I A +G E++L F+ M
Sbjct: 437 NVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMK 496
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
G P+ ITF+ +L AC H G VN+ F M+ + I + +HY C+VD+L RAG L
Sbjct: 497 KTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLL 556
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
++A ++ MP D WG+LL AC + + E+GE +K+ +L P + +V+LSN+Y
Sbjct: 557 KEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIY 616
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
A+ G W +V +R +M + GV K S IE VH FL GD +HP I+ I L +
Sbjct: 617 ASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVA 676
Query: 578 VQMKSVDDFVEIATSWSSFD 597
++K ++ +V TS S D
Sbjct: 677 AKLK-IEGYVP-TTSEVSLD 694
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 20/279 (7%)
Query: 260 LFERIQPKDCVSFNAMIAG--YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
+F ++ + ++N ++ Y QN +AL + + +PD T + C+A
Sbjct: 60 IFNHLRNPNTFTWNTIMRAHLYLQNS-PHQALLHYKLFLASHAKPDSYTYPILLQCCAAR 118
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
EGRQ H + +GF+ +V V N ++ +Y+ CG + + F + +LVSWNT++
Sbjct: 119 VSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLL 178
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGI 437
A + Q G E+A F M + + I S+++ G G V ++ +F V G
Sbjct: 179 AGYVQAGEVEEAERVFEGMP----ERNTIASNSMIALFGRKGCVEKARRIFN---GVRGR 231
Query: 438 IPSSEHYTCLVDILSRAGQLEKAWQI---TQGMPFEADTGVWGSLLAACVINLNVELGEL 494
++ +V + E+A + +G D V S L+AC LNVE+G
Sbjct: 232 ERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRW 291
Query: 495 AAKKMRELDPQNSAVYVMLSN----LYAAAGMWRDVTRV 529
++ ++ YV L N LY++ G D R+
Sbjct: 292 VHGLAVKVGVED---YVSLKNALIHLYSSCGEIVDARRI 327
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 268/450 (59%), Gaps = 8/450 (1%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD- 198
E + N +++ + K G LEEA LF++MP ++++S+T ++ G+ + G+ +A AL
Sbjct: 137 EDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPK 196
Query: 199 --YMSFKN---VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
++ F+ +S + +G ++ F YD NV V ++++ + +
Sbjct: 197 MLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAH 256
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ A+++F + K+ VS+NA+IAG+A+ G E +RLF M++ +P T SV A
Sbjct: 257 MREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-A 315
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C++ L +G+ H VI++G + + N +I MY++ G I D++ FR++ ++VSW
Sbjct: 316 CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSW 375
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N+II+ +AQHG +AL F QM P+ ITFLS+L+AC H+G ++E FELM K
Sbjct: 376 NSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK 435
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+ I H+ +VD+L RAG+L +A + + MP + VWG+LL AC ++ N++LG
Sbjct: 436 -HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGV 494
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
AA+++ ELDP +S +V+LSN+YA+AG D +VR +MKE GV K+ A SW+EI N+V
Sbjct: 495 YAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEV 554
Query: 554 HYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
H F+ D SHP ++I ++ S ++K +
Sbjct: 555 HVFVANDDSHPMREEIQRMWEKISGKIKEI 584
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 167/312 (53%), Gaps = 4/312 (1%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ ++ ++ ++ + K G LE A+ LF+++ KD VS+ +I+GY+Q+G A EAL LF
Sbjct: 136 FEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFP 195
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ + QP++ TL S+ A + GRQ H ++ G++ NV V ++++ MY+R
Sbjct: 196 KMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWA 255
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ ++++ F + + N+VSWN +IA A+ G E + F QM GF+P T+ S+L
Sbjct: 256 HMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL- 314
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC +G + + + ++K G P + L+D+ +++G ++ A ++ + + + D
Sbjct: 315 ACASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDI 372
Query: 474 GVWGSLLAACVIN-LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
W S+++ + L E +L + ++ N ++ + + +G+ + L
Sbjct: 373 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFEL 432
Query: 533 MKEQGVTKQCAY 544
MK+ + Q A+
Sbjct: 433 MKKHKIEAQVAH 444
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 187/399 (46%), Gaps = 50/399 (12%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D++ N I+ Y + G L+E+++LF MP K++VSW +I+G + + +A F M
Sbjct: 139 DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKML 198
Query: 140 ERNTATYNAMISGFLK---------HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
+S LK HGR A L + NV +++LD + + +
Sbjct: 199 HLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSL-KYGYDMNVHVGSSLLDMYARWAHM 257
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY---------- 234
+A+ + + ++ KNVVSW +I G+ + LF +M P +
Sbjct: 258 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACA 317
Query: 235 --------------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
++ +I + K G +++A+ +F R+ +D VS+N+
Sbjct: 318 SSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNS 377
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+I+GYAQ+G+ EAL+LF M+K +QP++ T +SV TACS LL+EG+ L+ ++
Sbjct: 378 IISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK 437
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFF 393
EA V+ V+ + R G + ++ ++ P W ++ A H + + +
Sbjct: 438 IEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAA 497
Query: 394 SQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
Q+ L+ D LS + A AG+++++ + ++M
Sbjct: 498 EQIFELDPHDSGPHVLLSNIYAS--AGRLSDAAKVRKMM 534
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
++P+ + C+ L+ L +GR H + + FE ++ + N ++ MY++CG + +++
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F ++ + ++VSW +I+ ++Q G +AL F +M GF P+ T SLL A G
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ L +K YG + + L+D+ +R + +A I + + + W +L
Sbjct: 221 SDHHGRQLHAFSLK-YGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNAL 278
Query: 480 LAA 482
+A
Sbjct: 279 IAG 281
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
++ N I +++G I A+++F ++ +D+++WN+II+GY Q+G E+ LF+ M
Sbjct: 342 YIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA 401
Query: 108 -PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEA 162
N +++ ++ C + +D+ YF+ M E A + ++ + GRL EA
Sbjct: 402 KVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEA 461
Query: 163 TRLFEQMP 170
+ E+MP
Sbjct: 462 NKFIEEMP 469
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/601 (29%), Positives = 301/601 (50%), Gaps = 81/601 (13%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V A + L R G + A + F ++ +I N+++ GY ++ + + +F+SMP ++
Sbjct: 196 VQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERD 255
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATYN------------------ 147
+VSWN +I+ + R+ +A D M P+ T T +
Sbjct: 256 VVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHV 315
Query: 148 ---------------AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
AM+ + K G +EA R+F + RN +S+T ++ GF++ G +
Sbjct: 316 QVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSE 375
Query: 193 ARALSDYM---------------------------------------SFKNVVSWTVMIT 213
+ L + M + VV +I+
Sbjct: 376 SVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLIS 435
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
Y K A +F M + D + T MIT + +VG + AR F+ + ++ +++N
Sbjct: 436 MYAKCGNLQNAELIFNFMAERD--IVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWN 493
Query: 274 AMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
AM+ Y Q+G E+ L+++S M+ + D+ PD T V++F C+ + G Q ++
Sbjct: 494 AMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVK 553
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
G + SV NAVITMYS+CG I ++ AF + +LVSWN +I ++QHG ++A+
Sbjct: 554 VGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEI 613
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F + G PD I+++++LS C H+G V E F++M + + I P EH++C+VD+L
Sbjct: 614 FDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLG 673
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG L +A + MP + VWG+LL+AC + N +L ELAAK + +LD S Y++
Sbjct: 674 RAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYML 733
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
L+ +YA AG D +VR LM+++G+ K YSW+E+ N+VH F D+SHP + I +
Sbjct: 734 LAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREK 793
Query: 573 L 573
L
Sbjct: 794 L 794
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 210/457 (45%), Gaps = 27/457 (5%)
Query: 46 STQYVFVNNAKISALSRAGKISA---ARQLFDQMTTKD----VITWNAIITGYWQNGFLQ 98
+T ++ + A AL G SA AR L ++ V N ++ Y G L
Sbjct: 18 ATSHMAITQALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALS 77
Query: 99 ESKNLFQ-SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
+++NL + + N+++ N M+ G + DA + F MP R+ A++N ++SG+ + G
Sbjct: 78 DARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSG 137
Query: 158 RLEEATRLFEQMPRR-----NVISYTAMLDGFMKKGEVDKARAL----SDYMSFKNVVSW 208
+ A +F M + N ++ ++ G + A L S + S +
Sbjct: 138 QFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQ 197
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
T ++ V+ A + F R+ + + +M+ G+ K +++A +F+ + +D
Sbjct: 198 TALVDMLVRCGAMDFASKQFSRIKN--PTIICRNSMLVGYAKSHGVDHALEIFKSMPERD 255
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
VS+N +I+ +++G EAL + M ++PD T S TAC+ L L G+Q HV
Sbjct: 256 VVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHV 315
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
VIRN + V +A++ +Y++CG +++ F + N VSW +I F Q+G + +
Sbjct: 316 QVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSE 375
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK---VYGIIPSSEHYT 445
++ F+QM D +L+S C + + L L +K ++ S+
Sbjct: 376 SVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNS--- 432
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+ + ++ G L+ A I M E D W ++ A
Sbjct: 433 -LISMYAKCGNLQNAELIFNFMA-ERDIVSWTGMITA 467
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 139/288 (48%), Gaps = 27/288 (9%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T+ V V+N+ IS ++ G + A +F+ M +D+++W +IT Y Q G + +++ F
Sbjct: 424 TRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDD 483
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-PERNT----ATYNAMISGFLKHGRLEE 161
M +N+++WN M+ I + +D + M E++ TY + G G +
Sbjct: 484 MSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKL 543
Query: 162 ATRLFEQMPRRNVISYTAMLDG----FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
++ + +I T++++ + K G + +AR D++S K++VSW MITGY +
Sbjct: 544 GDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQ 603
Query: 218 NERFCEARELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ +A E+F + PDY V A+++G G++E + F+ ++ +S
Sbjct: 604 HGMGKQAIEIFDDILNKGAKPDYISYV----AVLSGCSHSGLVEEGKFYFDMMKRDHNIS 659
Query: 272 -----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
F+ M+ + G EA L +M M+P ++ +AC
Sbjct: 660 PGLEHFSCMVDLLGRAGHLIEAKNLID---EMPMKPTAEVWGALLSAC 704
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 291/546 (53%), Gaps = 22/546 (4%)
Query: 19 PILRILSTPDSCGN---FTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
PILR L + CG+ F + ++ Q + A + S + A LF+
Sbjct: 60 PILRTLES--CCGSTKEFNQIHTQLIVSGLLQQPLAAGRAVKTLCSFPDSVQHAVSLFEG 117
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN----------CMIAGCI-D 124
+ D N I+ Y + + V+ V+ N C G I D
Sbjct: 118 LEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGD 177
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
++I F E + N++I + GR+ +A +FE +++++ +M+DG+
Sbjct: 178 GEKIHARILKFGF--ELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGY 235
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAM 244
+K GE+ AR L + M +++ SW MI GYV N A +LF +MP D + M
Sbjct: 236 VKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRD--IVSWNCM 293
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
I G+ +V +E A LF + ++ VS+N M+A Y + +E LR+F M+ M P++
Sbjct: 294 IDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETM-PNE 352
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFR 363
ATLVSV TAC+ L L+ G+ H + N E +V + A++TMY++CG + + F
Sbjct: 353 ATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFD 412
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
++ + ++VSWN++I + HG +KAL F M G P+ TF+ +LSAC H+G + E
Sbjct: 413 KMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILE 472
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
F+LM + Y I P EHY C+VD+L RAG ++ ++ + MP E T +WG+LL+AC
Sbjct: 473 GWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSAC 532
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
+ N EL E+ AK++ EL+P++ Y++LSN+YAA G W DV VR +MKE+G+TK
Sbjct: 533 RTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTG 592
Query: 544 YSWIEI 549
+SW+ I
Sbjct: 593 FSWVHI 598
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 284/531 (53%), Gaps = 17/531 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A + + + A ++F++M +D TWNA+++G+ Q+G ++ +LF+ M +
Sbjct: 693 VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRL 752
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEE 161
I + + I + + + +AM + N IS + K G L+
Sbjct: 753 NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS 812
Query: 162 ATRLFEQMPR--RNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVSWTVMITGYV 216
A +FE + R R V+S+ +M + GE A L M FK +S + +
Sbjct: 813 AKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASC 872
Query: 217 KNERFCEARELFYRMPDY---DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+N L + + D+++ + I+ + K +ARLLF+ + + CVS+
Sbjct: 873 QNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWT 932
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV-IR 332
MI+GYA+ G +EAL LF MIK +PD TL+S+ + C L G+ I
Sbjct: 933 VMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIY 992
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
NV +CNA+I MYS+CG I ++ F +V+W T+IA +A +G + +AL
Sbjct: 993 GCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKL 1052
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
FS+M + P+ ITFL++L AC H+G + + + F +M +VY I P +HY+C+VD+L
Sbjct: 1053 FSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLG 1112
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
R G+LE+A ++ + M + D G+WG+LL AC I+ NV++ E AA+ + L+PQ +A YV
Sbjct: 1113 RKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVE 1172
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
++N+YAAAGMW R+R +MK++ + K S I++ K H F G+ H
Sbjct: 1173 MANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGH 1223
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+VFV TA + F K ++ A +FER+ +D ++NAM++G+ Q+G ++A LF M
Sbjct: 692 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 751
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
++ PD T++++ + S + L H + IR G + V+V N I+ Y +CG +
Sbjct: 752 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 811
Query: 357 DSELAFRQIHSPN--LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
++L F I + +VSWN++ A++ G A + M F PD TF++L ++
Sbjct: 812 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 871
Query: 415 C 415
C
Sbjct: 872 C 872
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 158/392 (40%), Gaps = 67/392 (17%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I L + Q + N IS S++ +AR LFD MT++ ++W +I+GY + G + E+
Sbjct: 889 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEAL 948
Query: 102 NLFQSM----PVKNIVSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISG 152
LF +M ++V+ +I+GC ++ + DA N NA+I
Sbjct: 949 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDM 1008
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+ K G + EA +F+ P + V++ WT MI
Sbjct: 1009 YSKCGSIHEARDIFDNTPEKTVVT-------------------------------WTTMI 1037
Query: 213 TGYVKNERFCEARELFYRMP--DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
GY N F EA +LF +M DY N A++ G LE F ++ +
Sbjct: 1038 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 1097
Query: 271 S-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC----------- 314
S ++ M+ + G EEAL L M +PD ++ AC
Sbjct: 1098 SPGLDHYSCMVDLLGRKGKLEEALELIRN---MSAKPDAGIWGALLNACKIHRNVKIAEQ 1154
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+A L N Q + AN+ + ++R I+ + ++ +++ N
Sbjct: 1155 AAESLFNLEPQMAAPYVEM---ANIYAAAGMWDGFARIRSIM-KQRNIKKYPGESVIQVN 1210
Query: 375 TIIAAF--AQHGHYEKALIFFSQMGLNGFDPD 404
+F +HGH E +I+F+ GL+ F D
Sbjct: 1211 GKNHSFTVGEHGHVENEVIYFTLNGLSLFAKD 1242
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
E+L LF M + +P++ T V AC+ L + H +I++ F ++V V A +
Sbjct: 641 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 700
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
M+ +C + + F ++ + +WN +++ F Q GH +KA F +M LN PD +
Sbjct: 701 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 760
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKV 434
T ++L+ + +S+ L E M V
Sbjct: 761 TVMTLIQSAS----FEKSLKLLEAMHAV 784
>gi|297735121|emb|CBI17483.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/544 (30%), Positives = 293/544 (53%), Gaps = 29/544 (5%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N ++ L + G + AR++FD+M+ KD I+W +I+GY E+ LF++M V++
Sbjct: 59 SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 118
Query: 113 VSWNCMIAGCIDND-RIDDAFDYFQAMPERNTAT--------YNAMISGFLKHGRLEEAT 163
+ + I ++ +Y + + T +A++ + K+G++ E
Sbjct: 119 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 178
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKA--------RALSDYMSFKNVVSWTVMI-TG 214
R+F +MP RNV+S+TA++ G ++ G +A R+ +Y S+ ++ +G
Sbjct: 179 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 238
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+ R A+ + +D + FV + T + K G LE LFE++ +D VS+
Sbjct: 239 ALNYGREIHAQAM---KKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTT 295
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+I Q G E A++ F M + D+ P++ T +V + C+ L + G Q H L++ G
Sbjct: 296 IITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLG 355
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
A++SV N+++TMY++CG + S + F ++ ++VSW+TIIA ++Q GH +A S
Sbjct: 356 LAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLS 415
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV--------YGIIPSSEHYTC 446
M + G P S+LSACG+ + L ++ + Y I PS EHY C
Sbjct: 416 WMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMKYQISPSKEHYGC 475
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
++D+L RAG+L A + + MPF D VW +LL AC ++ +VE G A+++ +L+P
Sbjct: 476 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNC 535
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
+ ++ L+N+YA+ G WR+ +R LMK +GV K+ +SWI++ + V F+ GD SHP
Sbjct: 536 AGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQG 595
Query: 567 DKIH 570
+ I+
Sbjct: 596 EDIY 599
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 216/472 (45%), Gaps = 52/472 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV +A + ++ GKI R++F +M ++V++W AIITG + G+ +E+ F M
Sbjct: 158 VFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWR 217
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFD-YFQAMP---ERNTATYNAMISGFLKHGRLEE 161
+ ++ + C D+ ++ + + QAM + ++ N + + + K G+LE
Sbjct: 218 SRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEY 277
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
LFE+M R+V+S+T ++ ++ G+ + A M +V ++ +I+G
Sbjct: 278 GLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCAN 337
Query: 218 NERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
R +L + ++ V +++T + K G L ++ ++F + +D VS++ +
Sbjct: 338 LARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTI 397
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAGY+Q G EA L S M +P + L SV +AC + +L G+Q H V+ G
Sbjct: 398 IAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGL 457
Query: 336 EANV---------SVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAFAQHG 384
E +I + R G + D+E + H ++V W+T++ A HG
Sbjct: 458 EHTAMKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV-WSTLLRACRVHG 516
Query: 385 HYEKALIFFSQMGLNGFDPD-GITFLSLLSACGHAGKVNESMDLFELM------------ 431
E+ + + +P+ T ++L + GK E+ D+ +LM
Sbjct: 517 DVERGRRTAER--ILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWS 574
Query: 432 -VKVYGII----------PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
+KV ++ P E ++D+L+ +L Q T +P++ +
Sbjct: 575 WIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLPYDLE 626
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 289/552 (52%), Gaps = 46/552 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
DV T N+++ Y + G +++++ +F MPV++IV+WN M+ G + N A FQ M
Sbjct: 141 DVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMH 200
Query: 140 ERNTATYNAM-ISGFLKHGRLEEATRLFEQMP--------RRNVISYTAMLDGFMKKGEV 190
+ ++++ I L LE ++ +++ +++ T++LD + K GEV
Sbjct: 201 DALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEV 260
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTA------- 243
AR++ M + VV+W MI GY NER EA + F +M V VVTA
Sbjct: 261 AYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAAC 320
Query: 244 ------------------------------MITGFCKVGMLENARLLFERIQPKDCVSFN 273
++ + KVG +E++ +F +I K VS+N
Sbjct: 321 AQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWN 380
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
MIA Y + EA+ LF ++ + PD T+ +V A L L RQ H +I
Sbjct: 381 NMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGL 440
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G+ N + NAV+ MY+R G ++ S F ++ S +++SWNT+I +A HG + AL F
Sbjct: 441 GYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMF 500
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M NG P+ TF+S+L+AC +G V+E F LM++ YG+IP EHY C+ D+L R
Sbjct: 501 DEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGR 560
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
G L + Q + MP + + VWGSLL A ++++ E AA+++ +L+ N+ Y++L
Sbjct: 561 EGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVL 620
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
S++YA AG W DV RVRLLMKE+G+ + S +E+ + F GDMSH IH
Sbjct: 621 SSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVS 680
Query: 574 KRASVQMKSVDD 585
S +++ DD
Sbjct: 681 NILSRKIEETDD 692
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 143/296 (48%), Gaps = 57/296 (19%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
+D+ +++ Y + G + ++++F +MP++ +V+WNCMI G N+R D+AFD F M
Sbjct: 242 QDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQM 301
Query: 139 PERN--------------TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
A + + G HG + R F +P +V+ TA+L+ +
Sbjct: 302 RAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYV--VRRQF--LP--HVVLETALLEMY 355
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----- 233
K G+V+ + + ++ K +VSW MI Y+ E + EA LF + PD
Sbjct: 356 GKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMS 415
Query: 234 --------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
Y +N ++ A++ + + G + +R +F+++ K
Sbjct: 416 TVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSK 475
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
D +S+N MI GYA +G + AL +F M +QP+++T VSV TACS L++EG
Sbjct: 476 DVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 157/337 (46%), Gaps = 20/337 (5%)
Query: 139 PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK-----------K 187
P+R ++ +++ GR++EA + + + M+ GF +
Sbjct: 39 PKRGSS--KSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYR 96
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
G ++ A D +F VV + G + A + ++ + +V+ +++
Sbjct: 97 GMLEDG-ARPDRFTFPVVVKCCARLGGLDEGR---AAHGMVIKL-GLEHDVYTCNSLVAF 151
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDAT 306
+ K+G++E+A +F+ + +D V++N M+ GY NG+ AL F M +++Q D
Sbjct: 152 YAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVG 211
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+++ AC +G++ H VIR+G E ++ V +++ MY +CG + + F +
Sbjct: 212 IIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMP 271
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+V+WN +I +A + ++A F QM G + +T ++LL+AC
Sbjct: 272 LRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRS 331
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ +V+ +P T L+++ + G++E + +I
Sbjct: 332 VHGYVVR-RQFLPHVVLETALLEMYGKVGKVESSEKI 367
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 116/245 (47%), Gaps = 3/245 (1%)
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
+++ G ++ A ++ D N MI G+A G+ AL + GM++ +P
Sbjct: 46 SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D T V C+ L L+EGR +H +VI+ G E +V CN+++ Y++ G + D+E F
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKV 421
+ ++V+WNT++ + +G AL F +M D + ++ L+AC
Sbjct: 166 DGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSS 225
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ ++ +++ +G+ + T L+D+ + G++ A + MP W ++
Sbjct: 226 MQGKEIHGYVIR-HGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVV-TWNCMIG 283
Query: 482 ACVIN 486
+N
Sbjct: 284 GYALN 288
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 13/178 (7%)
Query: 2 LCNSYFHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALS 61
L N + Y P +L + C HS +I L + + NA + +
Sbjct: 402 LLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQI--HSY--IIGLGYAENTLIMNAVLHMYA 457
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNC 117
R+G + A+R++FD+M +KDVI+WN +I GY +G + + +F M N ++
Sbjct: 458 RSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVS 517
Query: 118 MIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMP 170
++ C + +D+ + +F M + Y M + G L E + E MP
Sbjct: 518 VLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMP 575
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 263/480 (54%), Gaps = 10/480 (2%)
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM---PERNTATYNAMISGFLKHGR 158
+F S+P N+ WN +I GC++N+++ A ++ M N TY +
Sbjct: 88 KVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQA 147
Query: 159 LEEATRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
++E ++ + + + S +A + + G ++ AR + Y +VV W MI G
Sbjct: 148 VQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF-YSGESDVVCWNTMIDG 206
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
Y+K A+ LF +MP KN+ MI G K G L +AR LF+ + +D +S+++
Sbjct: 207 YLKCGVLEAAKGLFAQMPV--KNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSS 264
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
M+ GY G +EAL +F M + + +P L SV ACS + +++GR H + RN
Sbjct: 265 MVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNS 324
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ + + A++ MY++CG + F ++ + +WN +I A HG E AL FS
Sbjct: 325 IKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFS 384
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
++ P+GIT + +L+AC HAG V++ + +F+ M + YG+ P EHY C+VD+L R+
Sbjct: 385 KLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRS 444
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G +A + MP + + VWG+LL AC I+ N +L E K + EL+PQNS YV+LS
Sbjct: 445 GLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLS 504
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+YA G + DV+++R LMK++G+ S +++ VH F GD SHP + +I+ +LK
Sbjct: 505 NIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLK 564
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 159/350 (45%), Gaps = 44/350 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + +A I + G++ AR++F + DV+ WN +I GY + G L+ +K LF MPV
Sbjct: 167 VHIKSAGIHMYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLKCGVLEAAKGLFAQMPV 225
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
KNI SWN MI G + DA F M ER+ ++++M+ G++ GR +EA +F+QM
Sbjct: 226 KNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQM 285
Query: 170 PRRNVISYTAMLDGFMKK----GEVDKARALSDYMSFKNV----VSWTVMITGYVKNERF 221
R +L + G +D+ R + Y+ ++ V T ++ Y K R
Sbjct: 286 QREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRL 345
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
E+F M ++ +F AMI G A
Sbjct: 346 DMGWEVFEEMK--EREIFTWNAMIGGL-------------------------------AI 372
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVS 340
+G AE+AL LFS + + M+P+ TLV V TAC+ +++G R + G + +
Sbjct: 373 HGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELE 432
Query: 341 VCNAVITMYSRCGGILDSE-LAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
++ + R G ++E L PN W ++ A HG+++ A
Sbjct: 433 HYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLA 482
>gi|354805230|gb|AER41645.1| CRR4 [Oryza punctata]
Length = 632
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 252/430 (58%), Gaps = 3/430 (0%)
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
F M +++ ++N+++ ++ G A LFE MP RNV+S+ ++ GF + G++ AR
Sbjct: 173 FDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVSWNTVVAGFARTGDMVTAR 232
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
+ D M +N VSW +MI+GY + AR +F RM K+V TAM++ + K+G L
Sbjct: 233 TVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQ--KDVVSWTAMVSAYAKIGDL 290
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS-GMIKMDMQPDDATLVSVFTA 313
+ A+ LF+ + K+ VS+NAMI GY N +EALR F M++ +PD+ATLVSV +A
Sbjct: 291 DTAKELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSA 350
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C+ L + + ++ V++ NA+I M+++CG + ++ F ++ + +++W
Sbjct: 351 CAQLGSVEYCNWISSFIGKSNTHLTVALGNALIDMFAKCGDVGRAQSIFYKMETRCIITW 410
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
T+I+ FA +G +AL+ ++ M G + DG F++ L+AC H G + E +F MV+
Sbjct: 411 TTMISGFAFNGLCREALLVYNNMCREGVELDGTVFIAALAACTHGGLLQEGWSIFNEMVE 470
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
Y I P EHY C+VD+L RAG L++A + MP E +W +LL++CV + N EL E
Sbjct: 471 QYNIQPRMEHYGCVVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLSSCVAHGNAELIE 530
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
+KK+ EL+P NS+ V++SN A G W V R M+ G+ K S I++G++V
Sbjct: 531 YVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIGARTSMRNWGIEKVPGSSLIQVGSEV 590
Query: 554 HYFLGGDMSH 563
H FL D H
Sbjct: 591 HEFLAKDTRH 600
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 215/438 (49%), Gaps = 51/438 (11%)
Query: 23 ILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAA-----RQLFDQMT 77
+L P CG ++R VFV NA + R G A RQ+FD+M
Sbjct: 122 LLGLPRPCGCVHGQ----IVRCGFGSDVFVQNALMDVYYRCGGGGAGGVGAARQVFDEMV 177
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
KDV++WN+I+ Y +G + LF++MP +N+VSWN ++AG + A F
Sbjct: 178 DKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVSWNTVVAGFARTGDMVTARTVFDR 237
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
MP RN ++N MISG+ G +E A +F++M +++V+S+TAM+ + K G++D A+ L
Sbjct: 238 MPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKIGDLDTAKELF 297
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------PDYDKNVFVVT-------- 242
D+M KN+VSW MITGY N R+ EA F M PD V VV+
Sbjct: 298 DHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSV 357
Query: 243 -----------------------AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
A+I F K G + A+ +F +++ + +++ MI+G+
Sbjct: 358 EYCNWISSFIGKSNTHLTVALGNALIDMFAKCGDVGRAQSIFYKMETRCIITWTTMISGF 417
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEAN 338
A NG+ EAL +++ M + ++ D ++ AC+ LL EG + +V + +
Sbjct: 418 AFNGLCREALLVYNNMCREGVELDGTVFIAALAACTHGGLLQEGWSIFNEMVEQYNIQPR 477
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ V+ + R G + ++ L + P++V W T++++ HG+ E LI +
Sbjct: 478 MEHYGCVVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLSSCVAHGNAE--LIEYVSKK 535
Query: 398 LNGFDPDGITFLSLLSAC 415
+ +P ++ L+S C
Sbjct: 536 ITELEPFNSSYQVLVSNC 553
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 45/215 (20%)
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
+ M + P+ T + AC+ L L H ++R GF ++V V NA++ +Y R
Sbjct: 98 YVAMRAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYYR 157
Query: 352 CGG---------------ILDSELA---------------------FRQIHSPNLVSWNT 375
CGG ++D ++ F + N+VSWNT
Sbjct: 158 CGGGGAGGVGAARQVFDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVSWNT 217
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
++A FA+ G A F +M + +++ ++S +G V + +F+ M +
Sbjct: 218 VVAGFARTGDMVTARTVFDRMP----SRNAVSWNLMISGYATSGDVEAARSVFDRMDQ-- 271
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+T +V ++ G L+ A ++ MP +
Sbjct: 272 ---KDVVSWTAMVSAYAKIGDLDTAKELFDHMPVK 303
>gi|357482291|ref|XP_003611431.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512766|gb|AES94389.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 735
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 302/568 (53%), Gaps = 51/568 (8%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N+ + L R G + AR++FD K+V++WNA+I GY +NG + ++K+LF + +N++
Sbjct: 169 NSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVI 228
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM---- 169
+W MI+G +++AF FQ MPE+N ++ AMI GF +G EA LF M
Sbjct: 229 TWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLS 288
Query: 170 -PRRNVISYTAM--------------------------LDGFMKK------------GEV 190
+ N ++ ++ LD + + G +
Sbjct: 289 DAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLM 348
Query: 191 DKARALSDY-MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
D AR++ + M + S+ MI GYV+ + +A+ELF +P +N T MI+G+
Sbjct: 349 DSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPI--RNKIAWTCMISGYL 406
Query: 250 KVGMLENARLLFERI--QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
G + A LF+ + KD +++ MI GY QN + EA+ LF+ M+ P ++T
Sbjct: 407 SAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTY 466
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRN--GFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
+F A ++ L+ G Q H + ++ +E +V + N++I+MY++CG I D+ F +
Sbjct: 467 AVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNM 526
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+ + +SWN++I + HG +AL + M G PD +TFL +L+AC HAG V++
Sbjct: 527 NCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGC 586
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
+LF +M+ Y + P EHY +++IL RAG+++ A + +P E + +WG+L+ C +
Sbjct: 587 ELFSVMLNDYALQPGLEHYVSIINILGRAGRVKDAEEFVLRLPVEPNHTIWGALIGVCGL 646
Query: 486 N-LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAY 544
+ + ++ AA ++ ELDP N+ +V L N+YAA + T +R M+ +GV K
Sbjct: 647 SKTDADIARRAATRLLELDPLNAPGHVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGC 706
Query: 545 SWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
SWI + KVH F GD P +++ L+
Sbjct: 707 SWILVKGKVHAFSSGDRLDPLAEEMLLQ 734
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 206/381 (54%), Gaps = 44/381 (11%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
++ ++ G + AR LFD M ++++T+NA+++ Y Q+G +++K F MP +N+VSW
Sbjct: 79 LTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNVVSWT 138
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
M++G IDDA F MPERN ++N+M+ G +++G LEEA ++F+ P +NV+S
Sbjct: 139 AMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVS 198
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+ AM++G+++ G +D A+ L D + +NV++WT MI+GY + EA LF MP +K
Sbjct: 199 WNAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDVNEAFRLFQIMP--EK 256
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
NV TAMI GF A NG EAL LF M+
Sbjct: 257 NVVSWTAMIGGF-------------------------------AWNGFYREALLLFLDMM 285
Query: 297 KM-DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC---NAVITMYSRC 352
+ D +P++ T VS+ AC+ + G+Q H +I N ++ + C +++ MYS C
Sbjct: 286 TLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVC 345
Query: 353 GGILDSELAFRQIHSPNL--VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
G++DS + + N S+N++I + Q G KA F + + + I +
Sbjct: 346 -GLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIR----NKIAWTC 400
Query: 411 LLSACGHAGKVNESMDLFELM 431
++S AG+V ++ +LF+ M
Sbjct: 401 MISGYLSAGQVLKASNLFDDM 421
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 15/206 (7%)
Query: 41 LIRLFSTQY-VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
L ++ +Y V++ N+ IS ++ G+I A ++F M +D I+WN++I G +G E
Sbjct: 490 LKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSDHGRANE 549
Query: 100 SKNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-----PERNTATYNAMI 150
+ N++++M + V++ ++ C +D + F M + Y ++I
Sbjct: 550 ALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHYVSII 609
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF--MKKGEVDKA-RALSDYMSFK--NV 205
+ + GR+++A ++P + L G + K + D A RA + + N
Sbjct: 610 NILGRAGRVKDAEEFVLRLPVEPNHTIWGALIGVCGLSKTDADIARRAATRLLELDPLNA 669
Query: 206 VSWTVMITGYVKNERFCEARELFYRM 231
+ Y N+R E L M
Sbjct: 670 PGHVTLCNIYAANDRHLEETSLRREM 695
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 193/678 (28%), Positives = 318/678 (46%), Gaps = 112/678 (16%)
Query: 19 PILRILSTPDSCGNFTPHSSNCLIRLFSTQY--VFVNNAKISALSRAGKISAARQLFDQM 76
P LR+L P S P ++ +RL + V ++ ++ AL ++G++S A LFD+M
Sbjct: 9 PTLRLLPAPTSHVIARPPTAAANVRLGAPPPPDVVLDCKRLDALMKSGRLSDALDLFDRM 68
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLF-------------------------------- 104
K+V+ W I+G +NG + + +F
Sbjct: 69 PRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNAALAACAAAGAGALSL 128
Query: 105 ----QSMPVKNIVSWNCMIAGCIDN-----DRIDDAFDYFQAMPERNTATYNAMISGFLK 155
S+ V+ + + I C+ + A + F+ M + Y +++S +
Sbjct: 129 GEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCR 188
Query: 156 HGRLEEATRLFEQM-------------------PR----------------RNVISYTAM 180
+G L A + QM PR ++V + TA+
Sbjct: 189 NGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRMIGEQIHGYMLKVMGSQSVYASTAL 248
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNV 238
+D + + G+ D A + + + KNVVSW M+ +++ R +A +F M + N
Sbjct: 249 IDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNE 308
Query: 239 F--------------------------------VVTAMITGFCKVGMLENARLLFERIQP 266
F V A+++ + + G + + +I+
Sbjct: 309 FAFSIALGACGSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIEN 368
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
D VS+ A I+ QNG +E+A+ L M P+D S ++C+ L LL++GRQ
Sbjct: 369 PDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQL 428
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H L ++ G + V NA+I MYS+CG I + LAF ++ +++SWN++I AQHG
Sbjct: 429 HCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAA 488
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
L FS+M +G+ PD TF+++L C HAG V E F LM YG+ P+ HY C
Sbjct: 489 NLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYAC 548
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
++D+L R G+ ++A + + MPFE D +W +LLA+C ++ N+++G+LA K+ EL ++
Sbjct: 549 MIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERD 608
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
SA YV++SNLYA W+D RVR M E GV K +SWIE+ N+V F+ D SH
Sbjct: 609 SASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDAGWSWIEVKNEVSTFVARDTSHSDS 668
Query: 567 DKIHLELKRASVQMKSVD 584
I+ L V M+ +
Sbjct: 669 ASIYQMLAELVVVMQDTE 686
>gi|325260825|gb|ADZ04643.1| hypothetical protein [Oryza punctata]
Length = 674
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 279/511 (54%), Gaps = 45/511 (8%)
Query: 54 NAKISALSRAGKISAARQLFDQMTT--KDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
A IS L++AG + A ++++M +D + NA++ GY + G L + +F+ M V++
Sbjct: 135 GAIISGLAKAGMLREAELVYEEMPQQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRD 194
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
++SW+ M+ G + + +A F AMPER+ ++ +MI G++K G + LF M R
Sbjct: 195 VISWSAMVDGLCKHGSVSEARRVFDAMPERSVVSWTSMIRGYVKRGMCSDGLLLFLNMRR 254
Query: 172 RNV------------------------------ISYTAMLDGFMKKGEV----------D 191
V IS LD F+ + D
Sbjct: 255 EGVQVNATTLSVVLDACAGASLAREGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMAD 314
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
RA + M K++VSW +ITGYV+++ EA LF MP K+ T+M+ GF
Sbjct: 315 AQRAF-NCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMPQ--KDAVSWTSMVVGFANR 371
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G + + LFE++ KD V++ A+I+ + NG A+R F M + +P+ T +
Sbjct: 372 GWMRESVELFEQMPVKDVVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTITFSCLL 431
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
+A ++L +LN+GRQ+H I G+ + +V ++I+MY++CG + ++ F I +P+L+
Sbjct: 432 SALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLISMYAKCGRLAEAHHVFSSISNPSLI 491
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ N++I AF QHG E AL F++M G+ P+ +TFL +L+ C AG V + + FE M
Sbjct: 492 AINSMITAFVQHGFAEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESM 551
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
VYG+ P+ EHYTC+VD+L RAG L +A ++ MP + W +LL+A ++ N+
Sbjct: 552 RPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAF 611
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
++AA+K+ E DP ++ Y +LS ++++AGM
Sbjct: 612 AKIAAQKLLEKDPYDATAYTVLSKMFSSAGM 642
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 204/380 (53%), Gaps = 39/380 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA ++A R G++ A+ LFDQM ++DVI+W A++T Y G L ++ +F MP +N
Sbjct: 42 NALLTAYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR-- 171
SWN +++ + R A F MP +N +Y A+ISG K G L EA ++E+MP+
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAGMLREAELVYEEMPQQW 161
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
R+ + A++ G+++ GE+ A + + M+ ++V+SW+ M+ G K+ EAR +F M
Sbjct: 162 RDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAM 221
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P +++V T+MI G+ K GM + LLF ++ ++ V NA
Sbjct: 222 P--ERSVVSWTSMIRGYVKRGMCSDGLLLFLNMR-REGVQVNA----------------- 261
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
TL V AC+ L EG Q H L+I GFE ++ + ++VI MYSR
Sbjct: 262 -------------TTLSVVLDACAGASLAREGIQIHNLIISMGFELDIFLGDSVIIMYSR 308
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G + D++ AF + ++VSWN++I + QH E+A + F M D +++ S+
Sbjct: 309 FGWMADAQRAFNCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMP----QKDAVSWTSM 364
Query: 412 LSACGHAGKVNESMDLFELM 431
+ + G + ES++LFE M
Sbjct: 365 VVGFANRGWMRESVELFEQM 384
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 185/387 (47%), Gaps = 39/387 (10%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
N +I + +F+ ++ I SR G ++ A++ F+ M KD+++WN++ITGY Q+ ++
Sbjct: 285 NLIISMGFELDIFLGDSVIIMYSRFGWMADAQRAFNCMQQKDIVSWNSLITGYVQHDMVE 344
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
E+ LF+ MP K+ VSW M+ G + + ++ + F+ MP ++ + A+IS F+ +G
Sbjct: 345 EAHVLFKLMPQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDVVAWTAIISSFITNGD 404
Query: 159 LEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
A R F +M + N I+++ +L +++ R Y + G
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTITFSCLLSALASLAMLNQGRQAHAY----------SINMG 454
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+V +D V T++I+ + K G L A +F I ++ N+
Sbjct: 455 WV-----------------FDSAVH--TSLISMYAKCGRLAEAHHVFSSISNPSLIAINS 495
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN- 333
MI + Q+G AE+AL+LF+ M +P+ T + + T C+ + +G ++ +R
Sbjct: 496 MITAFVQHGFAEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQG-YNYFESMRPV 554
Query: 334 -GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
G E N ++ + R G + ++ E+ + + +W +++A + H + A I
Sbjct: 555 YGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKI 614
Query: 392 FFSQ-MGLNGFDPDGITFLS-LLSACG 416
+ + + +D T LS + S+ G
Sbjct: 615 AAQKLLEKDPYDATAYTVLSKMFSSAG 641
>gi|356518777|ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 737
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 264/446 (59%), Gaps = 8/446 (1%)
Query: 129 DDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ A F +P + T ++N +IS + K G +EA LF++MP+RNV+SY +++ G ++
Sbjct: 62 ESAHKTFGDLPNKTTRSWNTLISFYSKTGFFDEAHNLFDKMPQRNVVSYNSLISGNLQWL 121
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGF 248
A+ M + NV+ +I Y K + +F MP+ +NV T+M+ +
Sbjct: 122 RQVHGVAVIVGMEW-NVILNNALIDAYGKCGEPNLSFSVFCYMPE--RNVVSWTSMVVAY 178
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
+ L+ A +F+ + K+ VS+ A++ G+ +NG +EA +F M++ ++P T V
Sbjct: 179 TRACRLDEACRVFKDMPVKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFV 238
Query: 309 SVFTACSALQLLNEGRQSHVLVIR---NGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
SV AC+ L+ G+Q H +IR +G NV VCNA+I MY++CG + +E F
Sbjct: 239 SVIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMA 298
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
++V+WNT+I FAQ+GH E++L F +M +P+ +TFL +LS C HAG NE +
Sbjct: 299 PMRDVVTWNTLITGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGLDNEGL 358
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP--FEADTGVWGSLLAAC 483
L +LM + YG+ P +EHY L+D+L R +L +A + + +P + VWG++L AC
Sbjct: 359 QLVDLMERQYGVKPKAEHYALLIDLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGAVLGAC 418
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
++ N++L AA+K+ EL+P+N+ YVML+N+YAA+G W R+R +MKE+ + K+ A
Sbjct: 419 RVHGNLDLARKAAEKLFELEPENTGRYVMLANIYAASGKWGGAKRIRNVMKERCLEKEPA 478
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKI 569
S IE+ N H F+ D HP +++I
Sbjct: 479 CSRIELRNARHEFVAKDKFHPQVEEI 504
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 187/382 (48%), Gaps = 43/382 (11%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ N I A S+ G +A + F + K +WN +I+ Y + GF E+ NLF MP +
Sbjct: 46 FLANGLIDAYSKCGCEESAHKTFGDLPNKTTRSWNTLISFYSKTGFFDEAHNLFDKMPQR 105
Query: 111 NIVSWNCMIAG--------------------CIDNDRIDDA----------FDYFQAMPE 140
N+VS+N +I+G I N+ + DA F F MPE
Sbjct: 106 NVVSYNSLISGNLQWLRQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVFCYMPE 165
Query: 141 RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
RN ++ +M+ + + RL+EA R+F+ MP +N +S+TA+L GF++ G D+A + M
Sbjct: 166 RNVVSWTSMVVAYTRACRLDEACRVFKDMPVKNTVSWTALLTGFVRNGGCDEAFDVFKQM 225
Query: 201 SFKNV----VSWTVMITGYVKNERFCEARELFYRMPDYDK-----NVFVVTAMITGFCKV 251
+ V ++ +I + +++ ++ DK NV+V A+I + K
Sbjct: 226 LEEGVRPSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKC 285
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G +++A LFE +D V++N +I G+AQNG EE+L +F MI+ ++P+ T + V
Sbjct: 286 GDMKSAENLFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVL 345
Query: 312 TACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-- 368
+ C+ L NEG Q L+ R G + +I + R ++++ ++
Sbjct: 346 SGCNHAGLDNEGLQLVDLMERQYGVKPKAEHYALLIDLLGRRNRLMEAMSLIEKVPDGIK 405
Query: 369 -NLVSWNTIIAAFAQHGHYEKA 389
++ W ++ A HG+ + A
Sbjct: 406 NHIAVWGAVLGACRVHGNLDLA 427
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 164/394 (41%), Gaps = 100/394 (25%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V +NNA I A + G+ + + +F M ++V++W +++ Y + L E+ +F+ MPV
Sbjct: 137 VILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSMVVAYTRACRLDEACRVFKDMPV 196
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER---------------------------- 141
KN VSW ++ G + N D+AFD F+ M E
Sbjct: 197 KNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVSVIDACAQEALIGRGKQV 256
Query: 142 --------------NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
N NA+I + K G ++ A LFE P R+V+++ ++ GF +
Sbjct: 257 HGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAPMRDVVTWNTLITGFAQN 316
Query: 188 GEVD----------KARALSDYMSFKNVVS------------------------------ 207
G + +A+ ++++F V+S
Sbjct: 317 GHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGLDNEGLQLVDLMERQYGVKPKAEH 376
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV-GMLENARLLFER--- 263
+ ++I + R EA L ++PD KN V + G C+V G L+ AR E+
Sbjct: 377 YALLIDLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGAVLGACRVHGNLDLARKAAEKLFE 436
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++P++ + + YA +G A R+ + M + ++ + ACS ++L N
Sbjct: 437 LEPENTGRYVMLANIYAASGKWGGAKRIRNVMKERCLEKE--------PACSRIELRN-- 486
Query: 324 RQSHVLVIRNGFEANV-SVC--NAVITMYSRCGG 354
H V ++ F V +C N+ + ++S+ G
Sbjct: 487 -ARHEFVAKDKFHPQVEEICEVNSKLVLHSKDAG 519
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 81/186 (43%), Gaps = 32/186 (17%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H +I+ + + N +I YS+CG + F + + SWNT+I+ +++ G +
Sbjct: 33 HGHLIKTALFFDAFLANGLIDAYSKCGCEESAHKTFGDLPNKTTRSWNTLISFYSKTGFF 92
Query: 387 EKALIFFSQMG--------------------------LNGFDPDGITFLSLLSACGHAGK 420
++A F +M + G + + I +L+ A G G+
Sbjct: 93 DEAHNLFDKMPQRNVVSYNSLISGNLQWLRQVHGVAVIVGMEWNVILNNALIDAYGKCGE 152
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
N S +F M + + +T +V +RA +L++A ++ + MP + +T W +LL
Sbjct: 153 PNLSFSVFCYMPERNVV-----SWTSMVVAYTRACRLDEACRVFKDMPVK-NTVSWTALL 206
Query: 481 AACVIN 486
V N
Sbjct: 207 TGFVRN 212
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 284/550 (51%), Gaps = 53/550 (9%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
++ ++ G+I AR++F+ MT ++V++WNA+I+GY QNG L+ ++ LF MP KN+ SWN
Sbjct: 108 LTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWN 167
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR-RNVI 175
++ G R+ +A + F MPERN+ ++ MISG++ EA +F +M R RN
Sbjct: 168 SVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTRNEY 227
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMITGYVKNERFCEARELFYRMPDY 234
S+T M+ F + G +D A L + + + N SW MI G+V+NE EA EL +
Sbjct: 228 SWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESREALELLIELHRS 287
Query: 235 DK-------------------------------------NVFVVTAMITGFCKVGMLENA 257
N +V+ +I+ + K G +E+
Sbjct: 288 GSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDG 347
Query: 258 RLLFE--RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+F R+ +D VS+ A+I+ Y Q G E AL LF M+ ++P+ T+ S+ +AC
Sbjct: 348 SHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACG 407
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L + G Q H L+ + GF+ + V N++ITMY +CG D F ++ +L++WN
Sbjct: 408 NLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNA 466
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
++ AQ+G ++A+ F QM + G PD ++FL +L AC HAG V+E F M + Y
Sbjct: 467 VLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKY 526
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL---G 492
GI+P HYTC+VD+L RAG L +A + + MP + D+ +W +LL AC I+ N EL
Sbjct: 527 GIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNNELLYHS 586
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNK 552
E A L N + ++ NL D M + + K I GN+
Sbjct: 587 EKLAVVFGILSTPNGSPIQIIKNLRICG----DCHTFMKFMSKVTLRKII----IRDGNR 638
Query: 553 VHYFLGGDMS 562
H+F G S
Sbjct: 639 FHHFRDGSCS 648
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/464 (35%), Positives = 267/464 (57%), Gaps = 18/464 (3%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
++F N +I L R G++ AR++F++M +DV++WN++I GY QNG + E++ LF +
Sbjct: 38 HLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFV 97
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
KNI +W ++ G RI++A + F++M ERN ++NAMISG++++G L+ A +LF++
Sbjct: 98 GKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDE 157
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
MP +NV S+ +++ G+ + +AR L D M +N VSW VMI+GYV + EA ++F
Sbjct: 158 MPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVF 217
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI-QPKDCVSFNAMIAGYAQNGVAEE 287
+M +N + T MI F + G L++A L+ER+ + + S+ AMIAG+ QN + E
Sbjct: 218 VKMCR-TRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESRE 276
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL L + + P D++ S +AC+ + + GR H L I+ G + N V N +I+
Sbjct: 277 ALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLIS 336
Query: 348 MYSRCGGILDSELAFRQIHSP--NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
MY++CG + D FR I P ++VSW II+A+ Q GH E AL F M G P+
Sbjct: 337 MYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQ 396
Query: 406 ITFLSLLSACGHAG--KVNESMD--LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
+T SLLSACG+ G K+ E +F+L + + +S L+ + + G E +
Sbjct: 397 LTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNS-----LITMYFKCG-YEDGF 450
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
+ + MP E D W ++L C N LG+ A K +++ +
Sbjct: 451 CVFEEMP-EHDLITWNAVLVGCAQN---GLGKEAIKIFEQMEVE 490
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
L I+ + ++ CN I R G + ++ F ++ ++VSWN++I ++Q+G ++
Sbjct: 29 LPIQETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDE 88
Query: 389 ALIFFSQMGLNGFDPDGI-TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
A + F + F I T+ LL+ G++ E+ ++FE M + + + +
Sbjct: 89 ARLLF-----DAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVV-----SWNAM 138
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + G L+ A ++ MP E + W S++
Sbjct: 139 ISGYVQNGDLKNARKLFDEMP-EKNVASWNSVVTG 172
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 245/436 (56%), Gaps = 6/436 (1%)
Query: 127 RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
R+ +A F MPER+ + M+ + E L +M R V+ +L +
Sbjct: 43 RVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLLNKMKRSRVVPDQVILATVLS 102
Query: 187 K----GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD--YDKNVFV 240
+ + + Y+ ++ + + + C E+ ++ K++
Sbjct: 103 TCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMADKIYSGMQRKDLVS 162
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
TAM+ G+ K G +E AR +F + KD VS++AMI+ YA+N E L LF+ M +
Sbjct: 163 STAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGV 222
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
PD+ T++SV +AC+ + L++ R H +V +GF +S+CNA+I M+S+CG + +
Sbjct: 223 SPDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKILSICNALIDMFSKCGSLTLALN 282
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + N+++W ++IAAFA HG AL F QM G +P+G+TFL LL AC HAG
Sbjct: 283 MFNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGL 342
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
V E LFE M++ Y I P EHY C+VD++ RA +++A + + M + +WGSLL
Sbjct: 343 VYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRPNVAIWGSLL 402
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
AAC ++ ++ELGE AAKK+ ELDP + YV+LSN++A +G W + ++R++MK GV+K
Sbjct: 403 AACWMHGDIELGEFAAKKILELDPNHDGAYVLLSNIHAKSGNWNNAQKLRVMMKVHGVSK 462
Query: 541 QCAYSWIEIGNKVHYF 556
+ YSW+E+ VH F
Sbjct: 463 ETGYSWLELNCTVHGF 478
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 201/444 (45%), Gaps = 51/444 (11%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
+R+ + + FV A + A + +++ AR++FD M +D++ W ++ Y+ +E+
Sbjct: 20 VRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETL 79
Query: 102 NLFQSMPVKNIVSWNCMIA------GCIDNDRIDDAFDYFQAMPE--RNTATYNAMISGF 153
L M +V ++A G + R + + + + +A+I+ +
Sbjct: 80 LLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMY 139
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
+E A +++ M R++++S TAM+ G+ K G+++ AR++ ++M+ K+VVSW+ MI+
Sbjct: 140 ASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMIS 199
Query: 214 GYVKNERFCEARELFYRM------PD-------------------------------YDK 236
Y +N + E LF +M PD + K
Sbjct: 200 AYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIVGNHGFYK 259
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+ + A+I F K G L A +F + K+ +++ +MIA +A +G AL LF M
Sbjct: 260 ILSICNALIDMFSKCGSLTLALNMFNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMK 319
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGI 355
++P+ T + + AC L+ EGR +++ E ++ + R +
Sbjct: 320 GEGVEPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLM 379
Query: 356 LDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
++ +H PN+ W +++AA HG E L F+ + DP+ LLS
Sbjct: 380 QEAVDLIESMHIRPNVAIWGSLLAACWMHGDIE--LGEFAAKKILELDPNHDGAYVLLSN 437
Query: 415 C-GHAGKVNESMDLFELMVKVYGI 437
+G N + L +M+KV+G+
Sbjct: 438 IHAKSGNWNNAQKL-RVMMKVHGV 460
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 39/282 (13%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D++ FV TA++ + + AR +F+ + +D V++ M+ Y E L L +
Sbjct: 25 DEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLLNK 84
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + + PD L +V + C + L G+ H + + + + +A+I MY+ C
Sbjct: 85 MKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASC-- 142
Query: 355 ILDSELA----------------------------------FRQIHSPNLVSWNTIIAAF 380
+D E+A F + ++VSW+ +I+A+
Sbjct: 143 -MDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAY 201
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A++ + L F++M G PD IT LS++SAC + G ++++ + + V +G
Sbjct: 202 AENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSI-VGNHGFYKI 260
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+D+ S+ G L A + MP + W S++AA
Sbjct: 261 LSICNALIDMFSKCGSLTLALNMFNAMP-RKNVITWTSMIAA 301
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 157/346 (45%), Gaps = 36/346 (10%)
Query: 1 MLCNSYFH-QTY---------LKRILFPPILRILSTPDSCGNFTPH--SSNCLIRLFSTQ 48
++ +SYF+ Q Y +KR P IL+T S T H S +
Sbjct: 64 VMLDSYFNTQNYRETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVS 123
Query: 49 YVFVN----NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+FV+ +A I+ + + A +++ M KD+++ A++ GY +NG ++ ++++F
Sbjct: 124 DIFVDARLSSALINMYASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIF 183
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLE 160
M K++VSW+ MI+ +N++ + + F M + T ++IS G L+
Sbjct: 184 NHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLD 243
Query: 161 EATRLFEQMPRR---NVISY-TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
+A + + ++S A++D F K G + A + + M KNV++WT MI +
Sbjct: 244 KARWIHSIVGNHGFYKILSICNALIDMFSKCGSLTLALNMFNAMPRKNVITWTSMIAAFA 303
Query: 217 KNERFCEARELFYRMP--DYDKNVFVVTAMITGFCKVGMLENARLLFE------RIQPKD 268
+ A LF +M + N ++ C G++ R LFE RI+PK
Sbjct: 304 MHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYRIEPKH 363
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ M+ + + +EA+ L M ++P+ A S+ AC
Sbjct: 364 -EHYGCMVDLMGRAKLMQEAVDLIE---SMHIRPNVAIWGSLLAAC 405
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
R +H + +R G + + V A++ Y+ C + ++ F + +LV+W ++ ++
Sbjct: 13 RGTHGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNT 72
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
+Y + L+ ++M + PD + ++LS CGH + + ++V I +
Sbjct: 73 QNYRETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSY-IQVSDIFVDARL 131
Query: 444 YTCLVDILSRAGQLEKAWQITQGM 467
+ L+++ + +E A +I GM
Sbjct: 132 SSALINMYASCMDMEMADKIYSGM 155
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/476 (34%), Positives = 266/476 (55%), Gaps = 43/476 (9%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMS 201
NA++ + L +A +LF++M R+V+S+T ++DG+ + G D+A R +
Sbjct: 170 NALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGG 229
Query: 202 FKNVVSWTV-----------------------------------MITGYVKNERFCEARE 226
+ N V+ ++ + K A+E
Sbjct: 230 WPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKE 289
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+F MP K+V+ T+M++ + K G LENA LF+ I ++ VS++ M+A Y+Q + E
Sbjct: 290 IFDGMPI--KDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPE 347
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH-VLVIRNGFEANVSVCNAV 345
EA+R+F+ MI ++P DATLVSV +AC+ L L+ GR + ++ + E V++ NA
Sbjct: 348 EAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAF 407
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I M+++CG + + FR + N+VSWNT+I A A HG E+AL F + G PD
Sbjct: 408 IDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDE 467
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
IT++ +LSAC H+G V+E F+ M VYGI P +EHY C++D+L + G LE+A+++ +
Sbjct: 468 ITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVAR 527
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
MP AD WG+LL AC ++ NVE+G+ AA K+ LDP +S +YV++S +YA+ W
Sbjct: 528 SMPVGADEAGWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQ 587
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
V +R +M+++GV K S IE+ K H FL D+SH + I+ L+ + K
Sbjct: 588 VKMIRTVMRDRGVKKNPGCSSIEVDGKFHEFLAADVSHAHSEDIYAALENIYLHSK 643
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 176/420 (41%), Gaps = 51/420 (12%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
R F Q V V NA + + + + AR+LFD+M +DV++W ++ GY + G E+
Sbjct: 159 RGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWR 218
Query: 103 LFQSMPV-----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGF 153
+F M V N V+ + + Q + E NA++ F
Sbjct: 219 VFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMF 278
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
K G + A +F+ MP ++V S+T+M+ + K G+++ A L + +N VSW+ M+
Sbjct: 279 GKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVA 338
Query: 214 GYVKNERFCEARELFYRMPD-----------------------------YDK-------- 236
Y + EA +F M YD
Sbjct: 339 AYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVE 398
Query: 237 -NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
V + A I F K G + A LF ++ K+ VS+N MI +A +G +EEAL LF
Sbjct: 399 LTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKF 458
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGR-QSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ + PD+ T + V +ACS L++EGR + I G E +I + + G
Sbjct: 459 KAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGL 518
Query: 355 ILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ ++ E+A + W ++ A HG+ E + L G DP L+S
Sbjct: 519 LEEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADK--LVGLDPSDSGIYVLMS 576
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 165/364 (45%), Gaps = 41/364 (11%)
Query: 158 RLEEATRLFEQMPR-RNVISYTAMLDGFMKKGEVDKA-----RALSDYMSFKNVVSWTVM 211
RL A + Q N M+ GF++ G+ A R L D + + +
Sbjct: 80 RLAHAAAVLAQCAEGPNAYMLATMMRGFLRAGKPAHALALFRRVLRDRLP-ADARTIVFA 138
Query: 212 ITGYVKNERFCEARE-LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+ + EA + ++ ++V V A++ + L +AR LF+ + +D V
Sbjct: 139 VKAATTSSSPAEAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVV 198
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ-PDDATLVSVFTACSALQLLNEGRQSHVL 329
S+ ++ GYA+ G+ +EA R+F M+ P++ TLV+ +A + LL GR H
Sbjct: 199 SWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQC 258
Query: 330 VIRNGFEANVSVCNAVITM-------------------------------YSRCGGILDS 358
V+ +G +V++ NA++ M Y++CG + ++
Sbjct: 259 VVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENA 318
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F++I + N VSW+ ++AA++Q E+A+ F+ M G +P T +S+LSAC
Sbjct: 319 GKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQL 378
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G ++ L++ + + + + +D+ ++ G + A ++ + M + + W +
Sbjct: 379 GCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNME-DKNVVSWNT 437
Query: 479 LLAA 482
++ A
Sbjct: 438 MIVA 441
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 29/297 (9%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
C++ V + NA + + G +++A+++FD M KDV +W ++++ Y + G L+
Sbjct: 257 QCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLE 316
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISGFL 154
+ LF+ +P +N VSW+CM+A + ++A F M E AT +++S
Sbjct: 317 NAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACA 376
Query: 155 KHGRLEEATRLFEQMPRRNVISYT-----AMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+ G L+ L++ + + T A +D F K G+V A L M KNVVSW
Sbjct: 377 QLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWN 436
Query: 210 VMITGYVKNERFCEARELFYR------MPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
MI + + + EA LF + PD + V++A G++ R F+
Sbjct: 437 TMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSAC----SHSGLVSEGRYHFKE 492
Query: 264 ------IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
I+P+ + MI + G+ EEA F M + D+A ++ AC
Sbjct: 493 MKIVYGIEPR-AEHYACMIDLLGKVGLLEEA---FEVARSMPVGADEAGWGALLNAC 545
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 189/615 (30%), Positives = 307/615 (49%), Gaps = 93/615 (15%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT--TKDVITWNAIITGYWQNGFLQ 98
L RL F A + A + G A Q+FD+M + DV++W A+I+ Y NG +
Sbjct: 78 LTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVD 137
Query: 99 ESKNLFQSMPVK-----------NIVSWNCMIA----GCIDN------------------ 125
E+ F M ++VS +++ GC N
Sbjct: 138 EAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFG 197
Query: 126 ----------------DRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEATRLFE 167
+ A+ F +P +R+ ++N++ISGF +G E A R FE
Sbjct: 198 VSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFE 257
Query: 168 QMPRR-------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
M N ++ A+L + G V+ + + +Y+S ++ ++++
Sbjct: 258 DMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHS---SLLVA------- 307
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
K+V V+TA++ + G L AR +F+ ++ K+ V ++AMIAGY
Sbjct: 308 ---------------KDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYE 352
Query: 281 QNGVAEEALRLF------SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
Q EEALRLF M+ ++++P+ TLVSV ACS L H + G
Sbjct: 353 QGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATG 412
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAFAQHGHYEKALIF 392
+ + + +A+I M ++CG I F ++ + +VSW+++I A HG ++AL
Sbjct: 413 LDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALEL 472
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
FS+M G++P+ IT++S+LSAC HAG V + F M K YG+ P+ +HY CLVD+L
Sbjct: 473 FSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLG 532
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG L++A + MP +AD +WGSLLAAC ++ N +LGE+ KK+ LD + +V+
Sbjct: 533 RAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVL 592
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
L+N+Y AG W DV R+R+ ++ G+ K S+IEIGN+V+ F+ D SHP + I+ E
Sbjct: 593 LANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKE 652
Query: 573 LKRASVQMKSVDDFV 587
L +++ +V
Sbjct: 653 LDGLDERVRKAAKYV 667
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 22/271 (8%)
Query: 264 IQPKDCVSFNAMIAGYA-QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
I KD +N++IA A QN + AL F+ M + ++ T ++ AC+AL+ L
Sbjct: 13 ISHKDTFHWNSLIAKNATQN--PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAF 380
Q H + R G A+ A++ Y +CG + F ++ S ++VSW +I+A+
Sbjct: 71 TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130
Query: 381 AQHGHYEKALIFFSQM----GLNGFDPDGITFLS---LLSACGHAGKVN---ESMDLFEL 430
+ +G ++A F +M G +G + G+ +S L+SAC N + L
Sbjct: 131 SSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA-DTGVWGSLLAACVINLNV 489
+VK YG S+ +V + S + AW++ G+P E D W SL++ +N
Sbjct: 191 VVK-YGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEA 249
Query: 490 ELG-----ELAAKKMRELDPQNSAVYVMLSN 515
E ++ ++ ++P V +L +
Sbjct: 250 ERALRTFEDMVSEGTSAVEPNRVTVIALLKS 280
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 234/376 (62%), Gaps = 4/376 (1%)
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
T ++ Y K A+++F RMP+ +++ TAMIT + K G +E AR LF+ + +D
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPE--RSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
VS+N MI GYAQ+G +AL LF ++ + +PD+ T+V+ +ACS + L GR H
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
V V + NV VC +I MYS+CG + ++ L F ++V+WN +IA +A HG+ +
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342
Query: 388 KALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
AL F++M G+ G P ITF+ L AC HAG VNE + +FE M + YGI P EHY C
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC 402
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
LV +L RAGQL++A++ + M +AD+ +W S+L +C ++ + LG+ A+ + L+ +N
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
S +YV+LSN+YA+ G + V +VR LMKE+G+ K+ S IEI NKVH F GD H
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKS 522
Query: 567 DKIHLELKRASVQMKS 582
+I+ L++ S ++KS
Sbjct: 523 KEIYTMLRKISERIKS 538
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 178/393 (45%), Gaps = 55/393 (13%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES--- 100
L +Y +N A + GKI + LF Q D+ + A I NG ++
Sbjct: 58 LLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLL 117
Query: 101 -KNLFQSMPVKNIVSWNCMIAGCI--DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
L S N +++ ++ C I F + AT ++ + K G
Sbjct: 118 YVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVAT--GLVDVYAKGG 175
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
+ A ++F++MP R+++S TAM+ + K+G V+ ARAL D M +++VSW VMI GY +
Sbjct: 176 DVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQ 235
Query: 218 NERFCEARELFYRM-----PDYDK---------------------------------NVF 239
+ +A LF ++ P D+ NV
Sbjct: 236 HGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK 295
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V T +I + K G LE A L+F KD V++NAMIAGYA +G +++ALRLF+ M +
Sbjct: 296 VCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGIT 355
Query: 300 -MQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+QP D T + AC+ L+NEG R + G + + ++++ R G +
Sbjct: 356 GLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQL-- 413
Query: 358 SELAFRQIHSPNL----VSWNTIIAAFAQHGHY 386
+ A+ I + N+ V W++++ + HG +
Sbjct: 414 -KRAYETIKNMNMDADSVLWSSVLGSCKLHGDF 445
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 266/454 (58%), Gaps = 7/454 (1%)
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
Q++ + N +++ + K G LEEA ++F++MP R+ +++T ++ G+ + A
Sbjct: 79 QSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALV 138
Query: 196 LSDYM---SFK-NVVSWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFC 249
L + M F N + + +I R C +L F +D NV V +A++ +
Sbjct: 139 LFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT 198
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
+ G++++A+L+F+ ++ ++ VS+NA+IAG+A+ E+AL LF GM++ +P + S
Sbjct: 199 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYAS 258
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+F ACS+ L +G+ H +I++G + N ++ MY++ G I D+ F ++ +
Sbjct: 259 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRD 318
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+VSWN+++ A+AQHG +A+ +F +M G P+ I+FLS+L+AC H+G ++E +E
Sbjct: 319 VVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYE 378
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
LM K GI+ + HY +VD+L RAG L +A + + MP E +W +LL AC ++ N
Sbjct: 379 LMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNT 437
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
ELG AA+ + ELDP + +V+L N+YA+ G W D RVR MKE GV K+ A SW+EI
Sbjct: 438 ELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEI 497
Query: 550 GNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
N +H F+ D HP ++I + + ++K +
Sbjct: 498 ENAIHMFVANDERHPQREEIARKWEEVLAKIKEL 531
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 164/383 (42%), Gaps = 54/383 (14%)
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDD 130
L + D++ N ++ Y + G L+E++ +F MP ++ V+W +I+G +DR D
Sbjct: 76 HLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFD 135
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP--------RRNVISYTAMLD 182
A F M + +S +K E Q+ NV +A+LD
Sbjct: 136 ALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 195
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF-------------- 228
+ + G +D A+ + D + +N VSW +I G+ + +A ELF
Sbjct: 196 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFS 255
Query: 229 ----------------------YRMPDYDKNV-FVVTAMITGFCKVGMLENARLLFERIQ 265
Y + +K V F ++ + K G + +AR +F+R+
Sbjct: 256 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 315
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+D VS+N+++ YAQ+G EA+ F M + ++P++ + +SV TACS LL+EG
Sbjct: 316 KRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWH 375
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH----SPNLVSWNTIIAAFA 381
+ L+ ++G ++ + R G D A R I P W ++ A
Sbjct: 376 YYELMKKDGIVLEAWHYVTIVDLLGRAG---DLNRALRFIEEMPIEPTAAIWKALLNACR 432
Query: 382 QHGHYEKALIFFSQMGLNGFDPD 404
H + E L ++ + DPD
Sbjct: 433 MHKNTE--LGAYAAEHVFELDPD 453
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 125/280 (44%), Gaps = 37/280 (13%)
Query: 286 EEALRLFSGMIKMDMQPDDATLV-SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
+E+L+ S ++ P D ++ C+ +LL +GR H +I++ F ++ + N
Sbjct: 32 DESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNT 91
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ MY++CG + ++ F ++ + V+W T+I+ ++QH AL+ F+QM GF P+
Sbjct: 92 LLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPN 151
Query: 405 GITFLSLLSA-------------------CGHAGKVNESMDLFELMVKVYGIIPSSE--- 442
T S++ A CG V+ L +L + YG++ ++
Sbjct: 152 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR-YGLMDDAQLVF 210
Query: 443 ---------HYTCLVDILSRAGQLEKAWQITQGM---PFEADTGVWGSLLAACVINLNVE 490
+ L+ +R EKA ++ QGM F + SL AC +E
Sbjct: 211 DALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLE 270
Query: 491 LGE-LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
G+ + A ++ + + L ++YA +G D ++
Sbjct: 271 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 310
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
F N + +++G I AR++FD++ +DV++WN+++T Y Q+GF E+ F+ M
Sbjct: 288 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRR 347
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEE 161
I +S+ ++ C + +D+ + Y++ M + Y ++ + G L
Sbjct: 348 GGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNR 407
Query: 162 ATRLFEQMP 170
A R E+MP
Sbjct: 408 ALRFIEEMP 416
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 115/278 (41%), Gaps = 46/278 (16%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V +A + +R G + A+ +FD + +++ ++WNA+I G+ + +++ LFQ M
Sbjct: 187 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLR 246
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL 165
+ S+ + C +GFL+ G+ A +
Sbjct: 247 EGFRPSHFSYASLFGACSS--------------------------TGFLEQGKWVHAY-M 279
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK----NERF 221
+ + + +LD + K G + AR + D ++ ++VVSW ++T Y + NE
Sbjct: 280 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAV 339
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA-----MI 276
C E+ R N +++T G+L+ +E + KD + A ++
Sbjct: 340 CWFEEM--RRGGIRPNEISFLSVLTACSHSGLLDEGWHYYE-LMKKDGIVLEAWHYVTIV 396
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ G ALR +M ++P A ++ AC
Sbjct: 397 DLLGRAGDLNRALRFIE---EMPIEPTAAIWKALLNAC 431
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 252/429 (58%), Gaps = 12/429 (2%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +++ ++K LEEA LF++MP RNV+S+T M+ + K + L + F+ V
Sbjct: 94 NTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCL--ILMFREGV 151
Query: 207 SWTVMITGYVKNERFCEA----RELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLL 260
+ Y R C+ R+L + + +VFV +A+I + K L+NA +
Sbjct: 152 RPNMFT--YSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGV 209
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ + +D V +N++I G+AQN EAL LF M + D ATL SV AC+ L LL
Sbjct: 210 FDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALL 269
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
GRQ HV V++ F+ ++ + NA+I MY +CG + D+ AF ++ +++SW+T++A
Sbjct: 270 ELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGL 327
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
AQ+G+ +AL F M +G P+ IT L +L AC HAG V + F M K++G+ P
Sbjct: 328 AQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPG 387
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
EHY CL+D+L RAG+L++A ++ M E D+ W +LL AC ++ NV+L AAKK+
Sbjct: 388 REHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKII 447
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
EL+P+++ Y++LSN+YA W DV VR M +G+ K SWIE+ ++H F+ GD
Sbjct: 448 ELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGD 507
Query: 561 MSHPCIDKI 569
SHP I++I
Sbjct: 508 TSHPKIEEI 516
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 184/436 (42%), Gaps = 71/436 (16%)
Query: 19 PILRILSTPDS--------CGNFTPHSSNCLIRLFSTQYVFVNNAKISAL----SRAGKI 66
P LR ++ P C + H + + VF + S L S G +
Sbjct: 12 PPLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAV 71
Query: 67 SAARQLFDQMTTK----DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGC 122
+++ + + K + N ++ Y + L+E+++LF MP +N+VSW MI+
Sbjct: 72 QEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISA- 130
Query: 123 IDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEE-ATRLFEQMPRRNVISY 177
N D A F+ N TY++++ L + + + +V
Sbjct: 131 YSNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVR 190
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP----- 232
+A++D + K ++D A + D M +++V W +I G+ +N EA LF RM
Sbjct: 191 SALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFL 250
Query: 233 ------------------------------DYDKNVFVVTAMITGFCKVGMLENARLLFE 262
+D+++ + A+I +CK G LE+A F
Sbjct: 251 ADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFS 310
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
R+ KD +S++ M+AG AQNG + +AL LF M + +P+ T++ V ACS L+ +
Sbjct: 311 RMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEK 370
Query: 323 G----RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH----SPNLVSWN 374
G R L G + +I + R G + + A + IH P+ V+W
Sbjct: 371 GWYYFRSMKKLF---GVDPGREHYGCLIDLLGRAGRL---DEAVKLIHEMECEPDSVTWR 424
Query: 375 TIIAAFAQHGHYEKAL 390
T++ A H + + A+
Sbjct: 425 TLLGACRVHRNVDLAI 440
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
A+R M + + D T + CSA + EG++ H + G+E + V N ++
Sbjct: 39 AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLN 98
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY + + ++E F ++ N+VSW T+I+A++ + +KAL M G P+ T
Sbjct: 99 MYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILMFREGVRPNMFT 157
Query: 408 FLSLLSACG--------HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
+ S+L AC H G + ++ ++ V+ + L+D+ S+ L+
Sbjct: 158 YSSVLRACDGLPNLRQLHCGIIKTGLE-SDVFVR-----------SALIDVYSKWSDLDN 205
Query: 460 AWQITQGMPFEADTGVWGSLLAA 482
A + MP D VW S++
Sbjct: 206 ALGVFDEMPTR-DLVVWNSIIGG 227
>gi|242059435|ref|XP_002458863.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
gi|241930838|gb|EES03983.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
Length = 544
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/429 (37%), Positives = 253/429 (58%), Gaps = 9/429 (2%)
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ DA F MP+RN +YNA+++G+ G ++ A LF M +++ ++ GF KK
Sbjct: 107 LADARRAFDEMPDRNVISYNALLAGYAAAGDMDGALALFGGMRSWTYVTWATLIRGFAKK 166
Query: 188 GEVDKARALSDYM--SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
G++ +AR + + VV+WTV++ GYV ARE+F RMP +N FV ++M+
Sbjct: 167 GDMAEARRWFETTPPGMRTVVTWTVLVHGYVSAGDMEAAREVFDRMPA--RNAFVWSSMV 224
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
TG+ K G E A+ +F RI ++ V++NA+IAGYAQ G +E+AL F M++ ++PD+
Sbjct: 225 TGYFKAGNAEEAQAVFHRIPTRNLVNWNALIAGYAQIGCSEKALEAFDSMLQERVKPDEF 284
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T+ S+ +AC+ L L +G++ H + R N V N +I MY++CG ++ + F +
Sbjct: 285 TMASLLSACAQLGSLEQGKKVHDFINREHIRKNHFVLNGLIDMYAKCGDLVYARYIFDGM 344
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
N WNT+I+A A HG ++AL F QM +G P+ IT L++L AC H G V+E +
Sbjct: 345 RWKNTECWNTMISALASHGRSDEALHLFFQMEHSGQTPNTITVLAVLGACTHGGFVDEGL 404
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
+F + YG+ EHY CLVD+L RAG+L++A++I + MP E + +WGSLL AC +
Sbjct: 405 RIFNKL-DAYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVKNMPEEPNEVIWGSLLGACRV 463
Query: 486 NLNVELGELAAKKMRELD----PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
+ + E+ L ++ L N A Y+MLSN+ AA+ W ++R M GV K
Sbjct: 464 HGDAEMSRLVTDEIHRLHSVHASSNDAEYIMLSNIMAASKRWEQAEQIRRKMARHGVEKT 523
Query: 542 CAYSWIEIG 550
A S +E+G
Sbjct: 524 PACSSLELG 532
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 191/421 (45%), Gaps = 47/421 (11%)
Query: 13 KRILFPPILRIL------STPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKI 66
+R P+L IL ++P G + L F+ + V +S + G +
Sbjct: 49 RRTHHQPLLPILLKAAATASPAEPGLGKSLHAEALKSAFARD-LLVGTTIVSMYCKCGAL 107
Query: 67 SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND 126
+ AR+ FD+M ++VI++NA++ GY G + + LF M V+W +I G
Sbjct: 108 ADARRAFDEMPDRNVISYNALLAGYAAAGDMDGALALFGGMRSWTYVTWATLIRGFAKKG 167
Query: 127 RIDDAFDYFQAMPE--RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+ +A +F+ P R T+ ++ G++ G +E A +F++MP RN +++M+ G+
Sbjct: 168 DMAEARRWFETTPPGMRTVVTWTVLVHGYVSAGDMEAAREVFDRMPARNAFVWSSMVTGY 227
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGY--------------------VKNERFCEA 224
K G ++A+A+ + +N+V+W +I GY VK + F A
Sbjct: 228 FKAGNAEEAQAVFHRIPTRNLVNWNALIAGYAQIGCSEKALEAFDSMLQERVKPDEFTMA 287
Query: 225 REL-----------------FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
L F KN FV+ +I + K G L AR +F+ ++ K
Sbjct: 288 SLLSACAQLGSLEQGKKVHDFINREHIRKNHFVLNGLIDMYAKCGDLVYARYIFDGMRWK 347
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ +N MI+ A +G ++EAL LF M P+ T+++V AC+ ++EG +
Sbjct: 348 NTECWNTMISALASHGRSDEALHLFFQMEHSGQTPNTITVLAVLGACTHGGFVDEGLRIF 407
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
+ G EA V ++ + R G + ++ E+ PN V W +++ A HG
Sbjct: 408 NKLDAYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVKNMPEEPNEVIWGSLLGACRVHGDA 467
Query: 387 E 387
E
Sbjct: 468 E 468
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 41/281 (14%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ +++ V T +++ +CK G L +AR F+ + ++ +S+NA++AGYA G + AL LF
Sbjct: 87 FARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVISYNALLAGYAAAGDMDGALALFG 146
Query: 294 GM----------------IKMDM----------QPDDATLVS----VFTACSALQLLNEG 323
GM K DM P T+V+ V SA +
Sbjct: 147 GMRSWTYVTWATLIRGFAKKGDMAEARRWFETTPPGMRTVVTWTVLVHGYVSAGDMEAAR 206
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+ RN F V ++++T Y + G +++ F +I + NLV+WN +IA +AQ
Sbjct: 207 EVFDRMPARNAF-----VWSSMVTGYFKAGNAEEAQAVFHRIPTRNLVNWNALIAGYAQI 261
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G EKAL F M PD T SLLSAC G + + + + + + + H
Sbjct: 262 GCSEKALEAFDSMLQERVKPDEFTMASLLSACAQLGSLEQGKKVHDFINREH---IRKNH 318
Query: 444 YTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ L+D+ ++ G L A I GM ++ +T W ++++A
Sbjct: 319 FVLNGLIDMYAKCGDLVYARYIFDGMRWK-NTECWNTMISA 358
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+ H +++ F ++ V +++MY +CG + D+ AF ++ N++S+N ++A +A
Sbjct: 75 GKSLHAEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVISYNALLAGYAA 134
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G + AL F M + +T+ +L+ G + E+ FE + +
Sbjct: 135 AGDMDGALALFGGMRSWTY----VTWATLIRGFAKKGDMAEARRWFETTPPGMRTVVT-- 188
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
+T LV AG +E A ++ MP + VW S++ N E
Sbjct: 189 -WTVLVHGYVSAGDMEAAREVFDRMPAR-NAFVWSSMVTGYFKAGNAE 234
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 255/435 (58%), Gaps = 7/435 (1%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMS 201
+ ++S + K G E+A RLF++MP ++++S+ +++ G +G + R ++
Sbjct: 158 DRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 217
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARL 259
N V+ +++ E + L + VV ++I + K+G L+ A
Sbjct: 218 QPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 277
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LFE + + VS+N+M+ + NG AE+ + LF+ M + + PD AT+V++ AC+ L
Sbjct: 278 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGL 337
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
+ H + R GF A++ + A++ +Y++ G + SE F +I + ++W ++A
Sbjct: 338 GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAG 397
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+A H +A+ F M G + D +TF LLSAC H+G V E FE+M +VY + P
Sbjct: 398 YAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 457
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HY+C+VD+L R+G+LE A+++ + MP E +GVWG+LL AC + NVELG+ A+++
Sbjct: 458 RLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL 517
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
LDP + Y+MLSN+Y+AAG+WRD ++VR LMKE+ +T+ S+IE GNK+H F+ G
Sbjct: 518 LSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVG 577
Query: 560 DMSHPCIDKIHLELK 574
D HP D+IH +L+
Sbjct: 578 DQLHPRSDEIHTKLE 592
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 172/354 (48%), Gaps = 17/354 (4%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ + +S + G A++LFD+M KD+++WN++++G G+L N F M +
Sbjct: 155 FIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTE 214
Query: 111 -----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEE 161
N V+ +++ C D +D+ + + + N++I+ + K G L+
Sbjct: 215 SGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDA 274
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN--- 218
A++LFE+MP R+++S+ +M+ G +K L + M + + ++
Sbjct: 275 ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTD 334
Query: 219 ---ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
R E+ + ++ ++ + TA++ + K+G L + +FE I+ +D +++ AM
Sbjct: 335 TGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAM 394
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNG 334
+AGYA + EA++LF M+K ++ D T + +ACS L+ EG++ ++
Sbjct: 395 LAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYR 454
Query: 335 FEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
E + + ++ + R G + D+ EL P+ W ++ A +G+ E
Sbjct: 455 VEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 508
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 140/270 (51%), Gaps = 7/270 (2%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IK 297
F+ +++ + K+G E+A+ LF+ + KD VS+N++++G + G L F M +
Sbjct: 155 FIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTE 214
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
QP++ TL+SV +AC+ + L+EG+ H +V++ G V N++I MY + G +
Sbjct: 215 SGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDA 274
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F ++ +LVSWN+++ +G+ EK + F+ M G +PD T ++LL AC
Sbjct: 275 ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTD 334
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
G + + + G T L+++ ++ G+L + I + + + D W
Sbjct: 335 TG-LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRDRIAWT 392
Query: 478 SLLAACVINL----NVELGELAAKKMRELD 503
++LA ++ ++L +L K+ E+D
Sbjct: 393 AMLAGYAVHACGREAIKLFDLMVKEGVEVD 422
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ + A ++ ++ G+++A+ +F+++ +D I W A++ GY + +E+ LF M
Sbjct: 357 IIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVK 416
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLE 160
+ + V++ +++ C + +++ YF+ M E Y+ M+ + GRLE
Sbjct: 417 EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLE 476
Query: 161 EATRLFEQMP 170
+A L + MP
Sbjct: 477 DAYELIKSMP 486
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 188/573 (32%), Positives = 290/573 (50%), Gaps = 55/573 (9%)
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA 120
S+ G + A+ FD +V ++N +I Y ++ + ++ +F +P +IVS+N +IA
Sbjct: 55 SKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIA 114
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS---- 176
D A F + E +SG + + L Q+ V+
Sbjct: 115 AYADRGECRPALRLFAEVRELRFGLDGFTLSGVII--ACGDDVGLVRQLHCFVVVCGYDC 172
Query: 177 ----YTAMLDGFMKKGEVDKARALSDYMS---FKNVVSWTVMITGYVKNERFCEARELFY 229
A+L + +KG +++AR + M ++ VSW MI ++ EA ELF
Sbjct: 173 YASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFR 232
Query: 230 RMPDYDKNV--FVVTAMITGF-------------------------------------CK 250
M V F + +++T F C
Sbjct: 233 EMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCA 292
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQ-NGVAEEALRLFSGMIKMDMQPDDATLVS 309
GM+E R +FE I D V +N MI+G++Q ++E+ + F M PDD + V
Sbjct: 293 GGMVE-CRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVC 351
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSP 368
V +ACS L + G+Q H L I++ N VSV NA++ MYS+CG + D+ F +
Sbjct: 352 VTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEH 411
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
N+VS N++IA +AQHG ++L F M P+ ITF+++LSAC H GKV E F
Sbjct: 412 NMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYF 471
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
+M + + I P +EHY+C++D+L RAG+L++A +I + MPF + W +LL AC + N
Sbjct: 472 NMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGN 531
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
VEL AA + +L+P N+A YVMLSN+YA+A W + V+ LM+E+GV K+ SWIE
Sbjct: 532 VELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIE 591
Query: 549 IGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
I KVH F+ D SHP I +IH+ + +MK
Sbjct: 592 IDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMK 624
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 13/188 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V VNNA ++ S+ G + AR++FD M ++++ N++I GY Q+G ES LF+ M
Sbjct: 382 VSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQ 441
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
K+I +++ +++ C+ ++++ YF M ER Y+ MI + G+L+
Sbjct: 442 KDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLK 501
Query: 161 EATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKA-RALSDYMSFK--NVVSWTVMITGYV 216
EA R+ E MP I + +L K G V+ A +A ++++ + N + ++ Y
Sbjct: 502 EAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYA 561
Query: 217 KNERFCEA 224
R+ EA
Sbjct: 562 SAARWEEA 569
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T ++ AC A + L G+ H L ++ + + N +YS+CG + +++ +F
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
PN+ S+NT+I A+A+H A F ++ PD +++ +L++A G+ ++
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHLARQVFDEIP----QPDIVSYNTLIAAYADRGECRPAL 126
Query: 426 DLF 428
LF
Sbjct: 127 RLF 129
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 262/480 (54%), Gaps = 10/480 (2%)
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM---PERNTATYNAMISGFLKHGR 158
+F S+P N+ WN +I GC++N+++ A ++ M N TY +
Sbjct: 88 KVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQA 147
Query: 159 LEEATRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
++E ++ + + + S +A + + G ++ AR + Y +VV W MI G
Sbjct: 148 VQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF-YSGESDVVCWNTMIDG 206
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
Y+K A+ LF +MP KN+ MI G K G L +AR LF+ + +D +S+++
Sbjct: 207 YLKCGVLEAAKGLFAQMPV--KNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSS 264
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
M+ GY G +EAL +F M + + +P L SV ACS + +++GR H + RN
Sbjct: 265 MVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNS 324
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ + + A++ MY++CG + F ++ + +WN +I A HG E AL FS
Sbjct: 325 IKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFS 384
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
++ P+GIT + +L+AC HAG V++ + +F+ M + YG+ P EHY C+VD+L R+
Sbjct: 385 KLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRS 444
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G +A + MP + + VWG+LL AC I+ N +L E K + EL+PQNS YV+LS
Sbjct: 445 GLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLS 504
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+YA G + DV+++R LMK +G+ S +++ VH F GD SHP + +I+ +LK
Sbjct: 505 NIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLK 564
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 159/350 (45%), Gaps = 44/350 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + +A I + G++ AR++F + DV+ WN +I GY + G L+ +K LF MPV
Sbjct: 167 VHIKSAGIQMYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLKCGVLEAAKGLFAQMPV 225
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
KNI SWN MI G + DA F M ER+ ++++M+ G++ GR +EA +F+QM
Sbjct: 226 KNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQM 285
Query: 170 PRRNVISYTAMLDGFMKK----GEVDKARALSDYMSFKNV----VSWTVMITGYVKNERF 221
R +L + G +D+ R + Y+ ++ V T ++ Y K R
Sbjct: 286 QREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRL 345
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
E+F M ++ +F AMI G A
Sbjct: 346 DMGWEVFEEMK--EREIFTWNAMIGGL-------------------------------AI 372
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVS 340
+G AE+AL LFS + + M+P+ TLV V TAC+ +++G R + G + +
Sbjct: 373 HGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELE 432
Query: 341 VCNAVITMYSRCGGILDSE-LAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
++ + R G ++E L PN W ++ A HG+++ A
Sbjct: 433 HYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLA 482
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 306 TLVSVFTACS--ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG-GILDSEL-A 361
T++ +F + S +LQ L Q H LV+R+G + V A++ Y+ D L
Sbjct: 33 TVLKLFDSKSITSLQYLT---QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKV 89
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F I +PN+ WN +I ++ KA+ F+ +M ++ P+ T+ +L AC A V
Sbjct: 90 FSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAV 148
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
E + +VK +GI + + + + G+LE A ++ E+D W ++
Sbjct: 149 QEGRQIHGHVVK-HGIGSDVHIKSAGIQMYASFGRLEDARKMF--YSGESDVVCWNTM-- 203
Query: 482 ACVINLNVELGELAAKK--MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
I+ ++ G L A K ++ +N + ++ N A G D ++ M E+
Sbjct: 204 ---IDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSER 257
>gi|125539877|gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 268/495 (54%), Gaps = 26/495 (5%)
Query: 104 FQSMPVKNIVSWNCMIAGCI-DNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLE 160
F +P KN S+N ++A + DA MP RN +YN +IS +HGR
Sbjct: 87 FDDLPHKNAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRES 146
Query: 161 EATRLFEQMPR-RNVISYTAMLDGFMKKGEVDKARALSDYMSFK-------------NVV 206
EA R+F Q+ R R + +D F L D + V+
Sbjct: 147 EALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVI 206
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
M+ Y K R +AR LF +M D + T+MI G+C+ ML++A +F+ +
Sbjct: 207 MANAMVDAYSKAGRVEDARGLFDQMTIRDSVSW--TSMIAGYCRASMLDDAVQVFDMMPA 264
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+D +++ A+I+G+ QNG E AL LF M + P LVS AC+ + L+ G++
Sbjct: 265 QDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEV 324
Query: 327 HVLVIRNGFEA---NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
H ++R + NV + NA+I MYS+CG ++ + F ++ +++SWN+++ F+ +
Sbjct: 325 HGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHN 384
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +++L F +M + P +TFL++L+AC HAG V++ + E M + +G+ P +EH
Sbjct: 385 GQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESM-QDHGVEPRAEH 443
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFE---ADTGVWGSLLAACVINLNVELGELAAKKMR 500
Y +D L R QLE+A + +G+ + TG WG+LL AC ++ N+E+ E A+ +
Sbjct: 444 YAAFIDALGRNHQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALF 503
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
+L+P+NS YVMLSN+Y+AAG W D +VR LMK +G+ K AYSWIE+ H F+ D
Sbjct: 504 QLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADD 563
Query: 561 MSHPCIDKIHLELKR 575
SH ++I+ L +
Sbjct: 564 TSHHEANEIYEMLDK 578
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 131/264 (49%), Gaps = 19/264 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + NA + A S+AG++ AR LFDQMT +D ++W ++I GY + L ++ +F MP
Sbjct: 205 VIMANAMVDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPA 264
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-ERNTATYNAMISGF---LKHGRLEEATRL 165
++ ++W +I+G N + A + F+ M E T A++S K G + +
Sbjct: 265 QDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEV 324
Query: 166 FEQMPRR-------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
+ RR NV + A++D + K G++ A A+ D M ++++SW M+TG+ N
Sbjct: 325 HGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHN 384
Query: 219 ERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQ-----PKDCVS 271
+ ++ +F RM + VT A++T G++ + R + E +Q P+
Sbjct: 385 GQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQDHGVEPR-AEH 443
Query: 272 FNAMIAGYAQNGVAEEALRLFSGM 295
+ A I +N EEA G+
Sbjct: 444 YAAFIDALGRNHQLEEASEFIKGL 467
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 187/605 (30%), Positives = 304/605 (50%), Gaps = 82/605 (13%)
Query: 31 GNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISA--ARQLFDQMTTKDVITWNAII 88
G+ T S+ +R+ Q++ S+ R +S+ A + + +V +WN++I
Sbjct: 1058 GSLTTRFSSVFLRVAEDQFLL---GFPSSRRRPVSLSSNLATWFYKYVDKSNVHSWNSVI 1114
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIV----SWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
+ G E+ F S+ ++ S+ C I C +
Sbjct: 1115 ADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC---------------------S 1153
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
++SG + H + F ++ +A++D + K G++ ARAL D + +N
Sbjct: 1154 ALCDLVSGRMSH------QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRN 1207
Query: 205 VVSWTVMITGYVKNER-------------------------------------------- 220
VVSWT MITGYV+NE+
Sbjct: 1208 VVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGK 1267
Query: 221 -FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
E F +D ++ V ++ + K G ++ +F+ ++ KD +S+N+MIA Y
Sbjct: 1268 GITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVY 1327
Query: 280 AQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
AQ+G++ EAL +F GM++ + ++ + TL +V AC+ L G+ H VI+ E N
Sbjct: 1328 AQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYN 1387
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V V ++I MY +CG + ++ F ++ N+ SW ++A + HG ++AL F +M
Sbjct: 1388 VCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVR 1447
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
G P+ ITF+S+L+AC HAG V E F M Y I P EHY C+VD+ RAG L
Sbjct: 1448 AGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLN 1507
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+A+ + + M + D VWGSLL AC I+ NV+LGE+AA+K+ ELDP N YV+LSNLYA
Sbjct: 1508 EAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYA 1567
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASV 578
AG W DV R+R+LMK + + K +S +E+ +VH FL GD HP + I+ L++ ++
Sbjct: 1568 DAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTL 1627
Query: 579 QMKSV 583
+++ +
Sbjct: 1628 ELQKI 1632
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 191/409 (46%), Gaps = 56/409 (13%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
I S G+I+ A LF Q+ TWN II NG +++ L+++M + I +
Sbjct: 66 IHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAA-- 123
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
D F + + + + ++ G + HG L + + + N+I
Sbjct: 124 -------------DKFTFPFVI--KACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLI- 167
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
D + K G A + + M +NVVSWT +I+
Sbjct: 168 -----DFYFKCGHTRFALKVFEKMRVRNVVSWTTVIS----------------------- 199
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
G G L+ AR +F+ I K+ VS+ AMI GY +N EEAL LF M
Sbjct: 200 ----------GLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ 249
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
++ P++ T+VS+ AC+ + +L GR H I+N E V + A+I MYS+CG I
Sbjct: 250 AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK 309
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F + +L +WN++I + HG ++AL FS+M PD ITF+ +L AC
Sbjct: 310 DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACV 369
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
H V E F M + YGI P EHY C+ ++ +R+ L++A++ T+
Sbjct: 370 HIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTK 418
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 19/256 (7%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LI+ + VFV N I + G A ++F++M ++V++W +I+G G LQE+
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKH 156
+ +F +P KN+VSW MI G I N + ++A + F+ M N T ++I +
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270
Query: 157 GRLEEATRLFEQMPRRNVISY-----TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
G L R +N I TA++D + K G + A + + M K++ +W M
Sbjct: 271 GILTLG-RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
IT + EA LF M + +T I C ++N + + C
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAIT-FIGVLCACVHIKNVK--------EGCAY 380
Query: 272 FNAMIAGYAQNGVAEE 287
F M Y + E
Sbjct: 381 FTRMTQHYGIAPIPEH 396
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 39/257 (15%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
RQ H +IR+G + + +I +YS G I + L F QI +P +WN II A +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSAC-------------------GHAGKV--- 421
G E+AL+ + M G D TF ++ AC G +G V
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 422 NESMDLF------ELMVKVYGI--IPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
N +D + +KV+ + + +T ++ L G L++A +I +P +
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP-SKNV 222
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
W +++ + N + E A + + + +N + N Y + + T + +L
Sbjct: 223 VSWTAMINGYIRN---QQPEEALELFKRMQAEN-----IFPNEYTMVSLIKACTEMGILT 274
Query: 534 KEQGVTKQCAYSWIEIG 550
+G+ + IEIG
Sbjct: 275 LGRGIHDYAIKNCIEIG 291
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V++ A I S+ G I A ++F+ M K + TWN++IT +G QE+ NLF M
Sbjct: 292 VYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMER 351
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERN-----TATYNAMISGFLKHGRLE 160
N+ +++ ++ C+ + + YF M + Y M + + L+
Sbjct: 352 VNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLD 411
Query: 161 EA 162
EA
Sbjct: 412 EA 413
>gi|195651797|gb|ACG45366.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 252/429 (58%), Gaps = 9/429 (2%)
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ DA F MP+RN +YNA+++G+ G ++ A LF M +++ ++ GF +K
Sbjct: 107 LADARRAFDEMPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVTWATLIRGFAEK 166
Query: 188 GEVDKARALSDYM--SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
G++ +AR + + VV+WTV++ GYV ARE+F RMP +N FV ++M+
Sbjct: 167 GDMAEARRWFEATPPGMRTVVTWTVLVQGYVCAGDMETAREVFDRMPA--RNAFVWSSMV 224
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
TG+ K G E AR +F+RI ++ V++NA+IAGYAQ G +E+AL F M++ ++PD+
Sbjct: 225 TGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEF 284
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T+ S+ +AC+ L L +G++ H + + N V N +I MY++CG + + F +
Sbjct: 285 TMASLLSACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSM 344
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
N WNT+I+A A HG ++AL F QM +G P+ IT L++L AC H G V+E +
Sbjct: 345 RWKNNECWNTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGL 404
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
+F + YG+ EHY CLVD+L RAG+L++A++I M E + +WGSLL AC +
Sbjct: 405 QIFNKL-DAYGVGAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLGACRV 463
Query: 486 NLNVELGELAAKKMRELD----PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
+ + E+ L +++ L N A Y+ML+N+ AA+ W ++R M +GV K
Sbjct: 464 HRDAEMSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQAEQMRRKMARRGVEKT 523
Query: 542 CAYSWIEIG 550
S +E+G
Sbjct: 524 PGCSSLELG 532
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 199/417 (47%), Gaps = 47/417 (11%)
Query: 13 KRILFPPILRIL------STPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKI 66
+R P+L +L S+P G + L F+ + V +S + G +
Sbjct: 49 RRTHHQPLLPVLLKAAAASSPTELGLGKSLHAEALKSAFARD-LLVGTTIVSMYCKCGAL 107
Query: 67 SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND 126
+ AR+ FD+M ++VI++NA++ GY G + + LF M V+W +I G +
Sbjct: 108 ADARRAFDEMPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVTWATLIRGFAEKG 167
Query: 127 RIDDAFDYFQAMPE--RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+ +A +F+A P R T+ ++ G++ G +E A +F++MP RN +++M+ G+
Sbjct: 168 DMAEARRWFEATPPGMRTVVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVWSSMVTGY 227
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----- 233
K G+ ++ARA+ D + +N+V+W +I GY + +A E F+ M PD
Sbjct: 228 FKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEFTMA 287
Query: 234 ------------------YD--------KNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+D KN FV+ +I + K G L +AR +F+ ++ K
Sbjct: 288 SLLSACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWK 347
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ +N MI+ A +G ++EAL LF M + +P+ T+++V AC+ ++EG Q
Sbjct: 348 NNECWNTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGLQIF 407
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
+ G A V ++ + R G + ++ E+ PN V W +++ A H
Sbjct: 408 NKLDAYGVGAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLGACRVH 464
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 27/274 (9%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ +++ V T +++ +CK G L +AR F+ + ++ +S+NA++AGYA G + AL LF
Sbjct: 87 FARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVISYNALLAGYAVAGDMDGALALFG 146
Query: 294 GMI----------------KMDM---------QPDDATLVSVFTACSALQLLNEGRQSHV 328
GM K DM P V +T + ++
Sbjct: 147 GMRSWTHVTWATLIRGFAEKGDMAEARRWFEATPPGMRTVVTWTVLVQGYVCAGDMETAR 206
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
V N V ++++T Y + G ++ F +I + NLV+WN +IA +AQ G E+
Sbjct: 207 EVFDRMPARNAFVWSSMVTGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQ 266
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL F M PD T SLLSAC G + + + + + + + I + L+
Sbjct: 267 ALEAFHLMLQERVKPDEFTMASLLSACAQLGSLEQGKKVHDFINQEH-IRKNHFVMNGLI 325
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
D+ ++ G L A I M ++ + W ++++A
Sbjct: 326 DMYAKCGDLAHARYIFDSMRWK-NNECWNTMISA 358
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 275 MIAGYAQNGVAEEALRLFSGMI--KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
++ YA + EA +++ + + QP L+ A S +L G+ H ++
Sbjct: 26 LVKEYASQSLLREAALVYARNLPRRTHHQPLLPVLLKAAAASSPTEL-GLGKSLHAEALK 84
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+ F ++ V +++MY +CG + D+ AF ++ N++S+N ++A +A G + AL
Sbjct: 85 SAFARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVISYNALLAGYAVAGDMDGALAL 144
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F G+ + +T+ +L+ G + E+ FE + + +T LV
Sbjct: 145 FG--GMRSWTH--VTWATLIRGFAEKGDMAEARRWFEATPPGMRTVVT---WTVLVQGYV 197
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLL 480
AG +E A ++ MP + VW S++
Sbjct: 198 CAGDMETAREVFDRMPAR-NAFVWSSMV 224
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 297/547 (54%), Gaps = 15/547 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+FV A +S ++ +I A ++F++M KD+++W ++ GY QNG + + L M
Sbjct: 180 LFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQE 239
Query: 109 ---VKNIVSWNCMIAGCIDND--RIDDAFD--YFQAMPERNTATYNAMISGFLKHGRLEE 161
+ V+ ++ D RI + F++ E NA++ + K G
Sbjct: 240 AGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARI 299
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV---KN 218
A +F+ M + V+S+ M+DG + GE ++A A M + V V + G + N
Sbjct: 300 ARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACAN 359
Query: 219 ERFCEARELFYRMPD---YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E +++ D D NV V+ ++I+ + K ++ A +F ++ K V++NAM
Sbjct: 360 LGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTNVTWNAM 418
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I GYAQNG +EAL LF M ++ D TLV V TA + + + + H L +R
Sbjct: 419 ILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACM 478
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ NV V A++ MY++CG I + F + ++++WN +I + HG ++ L F++
Sbjct: 479 DNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNE 538
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M P+ ITFLS++SAC H+G V E + LF+ M + Y + P+ +HY+ +VD+L RAG
Sbjct: 539 MQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAG 598
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
QL+ AW Q MP + V G++L AC I+ NVELGE AA+K+ +LDP +V+L+N
Sbjct: 599 QLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLAN 658
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+YA+ MW V +VR M+++G+ K SW+E+ N++H F G +HP KI+ L+
Sbjct: 659 IYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLET 718
Query: 576 ASVQMKS 582
++K+
Sbjct: 719 LGDEIKA 725
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 159/293 (54%), Gaps = 8/293 (2%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMSFK 203
+IS F K G EA R+FE + + + Y ML G+ K + A R + D +
Sbjct: 85 VISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLV 144
Query: 204 NVVSWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
V + ++ +N + RE+ ++ N+FV+TA+++ + K ++NA +F
Sbjct: 145 -VGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMF 203
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
ER+Q KD VS+ ++AGYAQNG A+ AL+L M + +PD TLVS+ A + ++ L
Sbjct: 204 ERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALR 263
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
GR H R+GFE+ V+V NA++ MY +CG + L F+ + S +VSWNT+I A
Sbjct: 264 IGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCA 323
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
Q+G E+A F +M G P +T + +L AC + G + + +L+ K+
Sbjct: 324 QNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKL 376
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 186/384 (48%), Gaps = 16/384 (4%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F +++F IS + G S A ++F+ + K + ++ ++ GY +N L ++ F
Sbjct: 75 FYNEHLFQTKV-ISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFF 133
Query: 105 QSM---PVKNIVS-WNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKH 156
M V+ +V + C++ C +N + + + E N A++S + K
Sbjct: 134 LRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKC 193
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
+++ A ++FE+M ++++S+T ++ G+ + G +A L M +V + +
Sbjct: 194 RQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSIL 253
Query: 217 ------KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
K R + + ++ V V A++ + K G ARL+F+ ++ K V
Sbjct: 254 PAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVV 313
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+N MI G AQNG +EEA F M+ P T++ V AC+ L L G H L+
Sbjct: 314 SWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLL 373
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+ ++NVSV N++I+MYS+C + + F + N V+WN +I +AQ+G ++AL
Sbjct: 374 DKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEAL 432
Query: 391 IFFSQMGLNGFDPDGITFLSLLSA 414
F M G D T + +++A
Sbjct: 433 NLFCMMQSQGIKLDCFTLVGVITA 456
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 278/520 (53%), Gaps = 29/520 (5%)
Query: 66 ISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
+S +QL + T D N ++ Y + G L + LF MP KNI+S N +I G
Sbjct: 68 LSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILING 127
Query: 122 CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAML 181
+ A F MPERN AT+NAM++G ++ EE LF +M
Sbjct: 128 YFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNEL--------- 178
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
GF+ E L + +V+ + GYV R ++ N+ VV
Sbjct: 179 -GFLPD-EFALGSVLRGCAGLRALVAGR-QVHGYV-------------RKCGFEFNLVVV 222
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
+++ + K G L L + ++ V++N +IAG AQNG EE L ++ M +
Sbjct: 223 SSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFR 282
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD T VSV ++CS L L +G+Q H VI+ G VSV +++I+MYSRCG + S
Sbjct: 283 PDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKV 342
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F + + ++V W+++IAA+ HG +A+ F+QM + + +TFLSLL AC H G
Sbjct: 343 FLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLK 402
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ + F+LMV+ YG+ P EHYTC+VD+L R G +E+A + + MP +AD W +LL+
Sbjct: 403 EKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLS 462
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC I+ E+ ++++ LDP++ YV+LSN++A+ W DV+ VR M+++ + K+
Sbjct: 463 ACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKE 522
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
SW+E+ N++H F GD SHP +I L+ + +MK
Sbjct: 523 PGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMK 562
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 187/418 (44%), Gaps = 60/418 (14%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F++N ++ S+ G++ A LF M K++++ N +I GY+++G ++ +F MP +
Sbjct: 88 FISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPER 147
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--------------RNTATYNAMISGFLKH 156
N+ +WN M+AG I + ++ F M E R A A+++G H
Sbjct: 148 NVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVH 207
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
G + + F N++ +++ +MK G + + L M +NVV+W +I G
Sbjct: 208 GYVRKCGFEF------NLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRA 261
Query: 217 KNERFCEARELFYRMP----DYDKNVF--------------------------------- 239
+N E + + M DK F
Sbjct: 262 QNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVS 321
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V++++I+ + + G LE + +F + D V +++MIA Y +G EA+ LF+ M +
Sbjct: 322 VISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEK 381
Query: 300 MQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++ +D T +S+ ACS L +G + ++V + G + + ++ + R G + ++
Sbjct: 382 LEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEA 441
Query: 359 ELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSA 414
E R + ++++W T+++A H E A ++ L+ DP LS + A
Sbjct: 442 EALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHA 499
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I+ ++ V V ++ IS SR G + + ++F + DV+ W+++I Y +G E+
Sbjct: 311 VIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEA 370
Query: 101 KNLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
+LF M + N V++ ++ C + +F M E+ Y M+
Sbjct: 371 IDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVD 430
Query: 152 GFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSD---YMSFKNVVS 207
++G +EEA L MP + +VI++ +L + + AR +S+ + ++ V
Sbjct: 431 LLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVP 490
Query: 208 WTVMITGYVKNERFCEARELFYRMPD 233
+ ++ + ++R+ + ++ M D
Sbjct: 491 YVLLSNIHASDKRWDDVSDVRKAMRD 516
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 37/183 (20%)
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
P A G ++A FS I + + + +C + L+ G+Q
Sbjct: 18 PSSGSELTAEFTNLCSKGHLKQAFDRFSSHI----WSEPSLFSHLLQSCISENSLSLGKQ 73
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA------------------------ 361
H L+I +G ++ + N ++ +YS+CG LD+ +
Sbjct: 74 LHSLIITSGCSSDKFISNHLLNLYSKCGQ-LDTAITLFGVMPRKNIMSCNILINGYFRSG 132
Query: 362 --------FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
F ++ N+ +WN ++A Q E+ L FS+M GF PD S+L
Sbjct: 133 DWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLR 192
Query: 414 ACG 416
C
Sbjct: 193 GCA 195
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 189/615 (30%), Positives = 307/615 (49%), Gaps = 93/615 (15%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT--TKDVITWNAIITGYWQNGFLQ 98
L RL F A + A + G A Q+FD+M + DV++W A+I+ Y NG +
Sbjct: 78 LTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVD 137
Query: 99 ESKNLFQSMPVK-----------NIVSWNCMIA----GCIDN------------------ 125
E+ F M ++VS +++ GC N
Sbjct: 138 EAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFG 197
Query: 126 ----------------DRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEATRLFE 167
+ A+ F +P +R+ ++N++ISGF +G E A R FE
Sbjct: 198 VSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFE 257
Query: 168 QMPRR-------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
M N ++ A+L + G V+ + + +Y+S ++ ++++
Sbjct: 258 DMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHS---SLLVA------- 307
Query: 221 FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
K+V V+TA++ + G L AR +F+ ++ K+ V ++AMIAGY
Sbjct: 308 ---------------KDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYE 352
Query: 281 QNGVAEEALRLF------SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
Q EEALRLF M+ ++++P+ TLVSV ACS L H + G
Sbjct: 353 QGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATG 412
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAFAQHGHYEKALIF 392
+ + + +A+I M ++CG I F ++ + +VSW+++I A HG ++AL
Sbjct: 413 LDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALEL 472
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
FS+M G++P+ IT++S+LSAC HAG V + F M K YG+ P+ +HY CLVD+L
Sbjct: 473 FSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLG 532
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG L++A + MP +AD +WGSLLAAC ++ N +LGE+ KK+ LD + +V+
Sbjct: 533 RAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVL 592
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
L+N+Y AG W DV R+R+ ++ G+ K S+IEIGN+V+ F+ D SHP + I+ E
Sbjct: 593 LANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKE 652
Query: 573 LKRASVQMKSVDDFV 587
L +++ +V
Sbjct: 653 LDGLDERVRKAAKYV 667
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 22/271 (8%)
Query: 264 IQPKDCVSFNAMIAGYA-QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
I KD +N++IA A QN + AL F+ M + ++ T ++ AC+AL+ L
Sbjct: 13 ISHKDTFHWNSLIAKNATQN--PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAF 380
Q H + R G A+ A++ Y +CG + F ++ S ++VSW +I+A+
Sbjct: 71 TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130
Query: 381 AQHGHYEKALIFFSQM----GLNGFDPDGITFLS---LLSACGHAGKVN---ESMDLFEL 430
+ +G ++A F +M G +G + G+ +S L+SAC N + L
Sbjct: 131 SSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA-DTGVWGSLLAACVINLNV 489
+VK YG S+ +V + S + AW++ G+P E D W SL++ +N
Sbjct: 191 VVK-YGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEA 249
Query: 490 ELG-----ELAAKKMRELDPQNSAVYVMLSN 515
E ++ ++ ++P V +L +
Sbjct: 250 ERALRTFEDMVSEGTSAVEPNRVTVIALLKS 280
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 301/561 (53%), Gaps = 40/561 (7%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQES 100
+++ S + +F + +++ R + LF++ K DV +WN++I ++G E+
Sbjct: 1 MKVRSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEA 60
Query: 101 KNLFQSM------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA---------- 144
F SM P ++ S+ C I C FD F A
Sbjct: 61 LLAFSSMRKLSLYPTRS--SFPCAIKAC------SSLFDIFSGKQTHQQAFVFGYQSDIF 112
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL-------- 196
+A+I + G+LE+A ++F+++P+RN++S+T+M+ G+ G A +L
Sbjct: 113 VSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDE 172
Query: 197 --SDYMSFKNVVSWTVMITG--YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
D F + + +I+ V + E+ F +D+ V V ++ + K G
Sbjct: 173 NDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG 232
Query: 253 M--LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA-TLVS 309
+ AR +F++I KD VS+N++++ YAQ+G++ EA +F ++K + +A TL +
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
V A S L G+ H VIR G E +V V ++I MY +CG + + AF ++ + N
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKN 352
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ SW +IA + HGH KAL F M +G P+ ITF+S+L+AC HAG E F
Sbjct: 353 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 412
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
M +G+ P EHY C+VD+L RAG L+KA+ + Q M + D+ +W SLLAAC I+ NV
Sbjct: 413 AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNV 472
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
EL E++ ++ ELD N Y++LS++YA AG W+DV RVR++MK +G+ K +S +E+
Sbjct: 473 ELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLEL 532
Query: 550 GNKVHYFLGGDMSHPCIDKIH 570
+VH FL GD HP +KI+
Sbjct: 533 NGEVHVFLIGDEEHPQREKIY 553
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR+ V V + I + G++ AR+ FD+M K+V +W A+I GY +G ++
Sbjct: 313 VIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKA 372
Query: 101 KNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
LF +M N +++ ++A C + + +F AM R Y M+
Sbjct: 373 LELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVD 432
Query: 152 GFLKHGRLEEATRLFEQM 169
+ G L++A L ++M
Sbjct: 433 LLGRAGFLQKAYDLIQRM 450
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/510 (31%), Positives = 286/510 (56%), Gaps = 15/510 (2%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N II Y + G +++ F +PVK+ V+W +I+G +DDA+ + P RN
Sbjct: 144 NPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVI 203
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDY- 199
++ +ISG+ + GR EA F M + ++ +L + ++ R+L
Sbjct: 204 SWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLV 263
Query: 200 ------MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
MS K VV+ +I Y K A E+F + + AMI G+CK+G
Sbjct: 264 GEKGMLMSGKLVVA---LIDMYAKCGDIGRAWEVFDAL-GRGRRPQSWNAMIDGYCKLGH 319
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
++ AR LF++++ +D V+FN++I GY G EAL LF M + D++ D+ T+VS+ TA
Sbjct: 320 VDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTA 379
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C++L L +GR H + + E ++ + A++ MY +CG + ++ L F+ + ++ +W
Sbjct: 380 CASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTW 439
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+ +IA A +G + AL +F M ++GF P+ +T++++L+AC H+ ++E FE M
Sbjct: 440 SAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRL 499
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
++ I P EHY C++D+L R+G L++A + + MP + + +W S+L+AC ++ + L
Sbjct: 500 LHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLAR 559
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
AA+ + +L+P AVYV L N+Y + W D +++R LM+E+GV K YS I + +V
Sbjct: 560 NAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQV 619
Query: 554 HYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
H F+ D +HP I +I ++ + ++KSV
Sbjct: 620 HKFIVCDRTHPQIMEITAMMEEITRRLKSV 649
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 181/424 (42%), Gaps = 81/424 (19%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C + + V+N I G AR+ FD + KD + W +I+G + G L +
Sbjct: 130 CFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDD 189
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTAT-------- 145
+ L + P +N++SW +I+G R +A D F +M P+ T
Sbjct: 190 AWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQ 249
Query: 146 -------------------------YNAMISGFLKHGRLEEATRLFEQMPR-RNVISYTA 179
A+I + K G + A +F+ + R R S+ A
Sbjct: 250 LKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNA 309
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD---- 235
M+DG+ K G VD AR L D M +++V++ +ITGY+ R EA LF +M +D
Sbjct: 310 MIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRAD 369
Query: 236 ---------------------------------KNVFVVTAMITGFCKVGMLENARLLFE 262
++++ TA++ + K G +E A L+F+
Sbjct: 370 NFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQ 429
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ +D +++AMIAG A NG+ + AL F M QP+ T +++ TACS LL+E
Sbjct: 430 AMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDE 489
Query: 323 GRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDS--ELAFRQIHSPNLVSWNTIIAA 379
GR + + + + +I + R G+LD +L PN V W +I++A
Sbjct: 490 GRLYFEEMRLLHNIRPLIEHYGCMIDLLGR-SGLLDEAMDLVRTMPMQPNAVIWASILSA 548
Query: 380 FAQH 383
H
Sbjct: 549 CRVH 552
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 289/566 (51%), Gaps = 32/566 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A + + +++ AR++FD+M +D + WN +ITG +N +S +F+ M
Sbjct: 138 LFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVA 197
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA-----------------TYNAMISG 152
+ + +D+ + M E +IS
Sbjct: 198 QGVR---------LDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISV 248
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-RALSDYMSFKNVVSWTVM 211
F K ++ A LF + + +++SY A++ GF GE + A + + + VS + M
Sbjct: 249 FSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTM 308
Query: 212 ITGYVKNERFCEAR-----ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
+ + F + F V TA+ T + ++ ++ AR LF+
Sbjct: 309 VGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSE 368
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K ++NAMI+GYAQ+G+ E A+ LF M+ + P+ T+ S+ +AC+ L L+ G+
Sbjct: 369 KTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSV 428
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H L+ E N+ V A+I MY++CG I ++ F N V+WNT+I + HG+
Sbjct: 429 HQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYG 488
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++AL F++M GF P +TFLS+L AC HAG V E ++F MV Y I P +EHY C
Sbjct: 489 DEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYAC 548
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VDIL RAGQLEKA + + MP E VWG+LL AC+I+ + L +A++++ ELDP N
Sbjct: 549 MVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGN 608
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
YV+LSN+Y+ + VR +K++ ++K + IE+ H F+ GD SH
Sbjct: 609 VGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQT 668
Query: 567 DKIHLELKRASVQMKSVDDFVEIATS 592
I+ +L+ + +M+ + E T+
Sbjct: 669 TSIYAKLEELTGKMREMGYQSETVTA 694
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 223/498 (44%), Gaps = 62/498 (12%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNL-FQSMPVKNIV--------- 113
G AR LF + D+ +N +I G+ F ++ ++ F + +KN
Sbjct: 54 GATRHARALFFSVPKPDIFLFNVLIKGF---SFSPDASSISFYTHLLKNTTLSPDNFTYA 110
Query: 114 -----SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
S + + C+ + D FD N +A++ + K R+ A ++F++
Sbjct: 111 FAISASPDDNLGMCLHAHAVVDGFD-------SNLFVASALVDLYCKFSRVAYARKVFDK 163
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF------- 221
MP R+ + + M+ G ++ D + + FK++V+ V +
Sbjct: 164 MPDRDTVLWNTMITGLVRNCCYDDSVQV-----FKDMVAQGVRLDSTTVATVLPAVAEMQ 218
Query: 222 ---------CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
C A +L + DY V+T +I+ F K ++ ARLLF I+ D VS+
Sbjct: 219 EVKVGMGIQCLALKLGFHFDDY-----VLTGLISVFSKCEDVDTARLLFGMIRKPDLVSY 273
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NA+I+G++ NG E A++ F ++ + +T+V + S L+ ++
Sbjct: 274 NALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVK 333
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+G SV A+ T+YSR I + F + + +WN +I+ +AQ G E A+
Sbjct: 334 SGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISL 393
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M F P+ +T S+LSAC G ++ + +L +K + + T L+D+ +
Sbjct: 394 FQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQL-IKSKNLEQNIYVSTALIDMYA 452
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAK---KMRELDPQNSAV 509
+ G + +A Q+ + E +T W +++ ++ G+ A K +M L Q S+V
Sbjct: 453 KCGNISEASQLFD-LTSEKNTVTWNTMIFGYGLH---GYGDEALKLFNEMLHLGFQPSSV 508
Query: 510 YVMLSNLYAA--AGMWRD 525
LS LYA AG+ R+
Sbjct: 509 -TFLSVLYACSHAGLVRE 525
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q ++V+ A I ++ G IS A QLFD + K+ +TWN +I GY +G+ E+ LF M
Sbjct: 439 QNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEM 498
Query: 108 P----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGR 158
+ V++ ++ C + + + F AM E Y M+ + G+
Sbjct: 499 LHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQ 558
Query: 159 LEEATRLFEQMP 170
LE+A +MP
Sbjct: 559 LEKALEFIRKMP 570
>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 277/537 (51%), Gaps = 61/537 (11%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ ++ ++ L + G I A+ F QM KDV+ WN +I G+ Q G +E NLF M
Sbjct: 191 FLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYN 250
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
I + I Q+ E T+ + GF+ + TR+
Sbjct: 251 KIEPSAVTMISLI------------QSCGEMRNLTFGKCMHGFVLGFGMSRDTRVL---- 294
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
T ++D + K G+V+ AR + + M +N+VSW VMI+GYV+N E LF +
Sbjct: 295 -------TTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQK 347
Query: 231 --MPD-----------------------------------YDKNVFVVTAMITGFCKVGM 253
M D D N+ + TA++ + K G
Sbjct: 348 LIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGS 407
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L A +FER++ K+ +S+ AM+ G AQNG A +AL+LF M + + TLVS+
Sbjct: 408 LAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYC 467
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLVS 372
C+ L LL EGR H + R F + V V A+I MY++C I +E+ F+ +P +++
Sbjct: 468 CTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVIL 527
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
+N++I+ + HG KAL + +M G P+ TF+SLLSAC H+G V E + LF+ MV
Sbjct: 528 YNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMV 587
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
K + P+ + Y C+VD+LSRAG+L +A ++ MPF +G+ +LL C+++ ++ELG
Sbjct: 588 KDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELG 647
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
A ++ L+ +N ++Y+ LSN+YA A W V VR LM EQ + K YS IE+
Sbjct: 648 VKLADRLLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEV 704
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 6/246 (2%)
Query: 225 RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
RE+ P Y F+V ++ + +G LENAR +F+ I V NAM+ GY QN
Sbjct: 77 REIIITNPIYGDQ-FLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNER 135
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
+ + L M + ++ D T AC L G + L + G + ++
Sbjct: 136 YNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSS 195
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ + G I+ ++ F Q+ ++V WN +I F Q G + + F M N +P
Sbjct: 196 ILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPS 255
Query: 405 GITFLSLLSACGHAGKVN--ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
+T +SL+ +CG + + M F V +G+ + T L+D+ ++G +E A
Sbjct: 256 AVTMISLIQSCGEMRNLTFGKCMHGF---VLGFGMSRDTRVLTTLIDMYCKSGDVESARW 312
Query: 463 ITQGMP 468
I + MP
Sbjct: 313 IFENMP 318
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 298/584 (51%), Gaps = 51/584 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F N I S+ ++ A F QM +D ++WN II+ + +G +S F M +
Sbjct: 59 LFSWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWI 118
Query: 110 K----NIVSWNCMIAGCID-----------------------------------NDRIDD 130
+ N +++ +++ C + ID
Sbjct: 119 QGCQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDA 178
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
+ F + E N T+ ++ISG G EE +F QM + VI +L + E
Sbjct: 179 SKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEG 238
Query: 191 DKARALSDYM---SFKNVVSWTV-----MITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
+ ++ + + + K ++ +V ++ Y K F +A F M +D V T
Sbjct: 239 ETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHD--VISWT 296
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
MIT F G +E AR F R+ ++ +S+NAM+ Y QN EE L+L+ M++ +++P
Sbjct: 297 TMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRP 356
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D T V++ ACS L + G Q ++ G ++VSV N+ IT+YSRCG I +++ F
Sbjct: 357 DWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLF 416
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
I NL+SWN+I+ +AQ+G K + F M + G PD IT++++LS C H+G V
Sbjct: 417 DSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVK 476
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
E+ F M K +GI + EH+ C+VD+ RAG L+ A + MPF+ + +WG+LL+A
Sbjct: 477 EAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSA 536
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
C I+ + E+ ELA K + EL+ +N Y++L+N Y++ G V+ VR +MKE+ V K
Sbjct: 537 CRIHHDTEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDP 596
Query: 543 AYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDF 586
SWIE+ N+VH F D SHP + I+ L+ ++K DD+
Sbjct: 597 GCSWIEVCNRVHVFTANDTSHPQVKDIYKALEDIVKKIK--DDY 638
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 217/502 (43%), Gaps = 89/502 (17%)
Query: 18 PPILRILSTPDSCGN-----FTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQL 72
P + S +C N + H ++R+ V V N + ++ G I A++++
Sbjct: 123 PNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRV 182
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI------DND 126
F+ + +V+TW ++I+G G +E ++F M ++ N ++A + N
Sbjct: 183 FNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNI 242
Query: 127 RIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
I + F N++ NA +S + K G E+A+ FE M +VIS+T M+ F
Sbjct: 243 SIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSF 302
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY---- 234
G V++AR + M +NV+SW M+ Y +N + E +L+ M PD+
Sbjct: 303 SHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFV 362
Query: 235 ---------------------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+V VV + IT + + G +E A+ LF+ IQ K
Sbjct: 363 TMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEK 422
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ +S+N+++ GYAQNG + + +F M+ +PD T +++ + CS L+ E + H
Sbjct: 423 NLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKY-H 481
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ F +V++ + V ++ F + G +
Sbjct: 482 FNSMTKDFGISVTLEHFV-----------------------------CMVDLFGRAGLLK 512
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS--EHYT 445
AL QM F P+ + +LLSAC +++ ++ EL +K + + E Y
Sbjct: 513 LALDMIDQM---PFKPNASIWGALLSAC----RIHHDTEMAELAMKNLLELNTENFESYI 565
Query: 446 CLVDILSRAGQLEKAWQITQGM 467
L + S G+LE ++ Q M
Sbjct: 566 LLANTYSSFGRLECVSEVRQVM 587
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 205/464 (44%), Gaps = 72/464 (15%)
Query: 59 ALSRAGKISAARQLFDQMTTK-----DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
A S G I A QL ++ K + + N+II Y + + ++ +F + ++
Sbjct: 2 ACSSVGYIRIAHQLHG-LSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLF 60
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM---- 169
SWNCMI G + A D F+ MPER++ ++N +IS F HG ++ F +M
Sbjct: 61 SWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQG 120
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
+ N ++Y ++L + D+ K++ + V + ++
Sbjct: 121 CQPNSMTYASVLSA---------CANIYDFQWGKHLHARIVRVEPFL------------- 158
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+V V ++ + K G+++ ++ +F ++ + V++ ++I+G A G EE
Sbjct: 159 -------DVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVY 211
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
+F M K + D+ L ++ C ++ G Q H ++ G ++V V NA ++MY
Sbjct: 212 DIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMY 271
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM------------- 396
++CG + LAF + + +++SW T+I +F+ G+ E+A +F++M
Sbjct: 272 AKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLG 331
Query: 397 ----------GLNGF--------DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
GL + PD ITF++++ AC + VKV G+
Sbjct: 332 AYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKV-GLG 390
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + SR G++E+A + + E + W S++
Sbjct: 391 SDVSVVNSAITLYSRCGRIEEAQNLFDSIQ-EKNLISWNSIMGG 433
>gi|414879404|tpg|DAA56535.1| TPA: pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 252/429 (58%), Gaps = 9/429 (2%)
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ DA F MP+RN +YNA+++G+ G ++ A LF M +++ ++ GF +K
Sbjct: 107 LADARRAFDEMPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVTWATLIRGFAEK 166
Query: 188 GEVDKARALSDYM--SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
G++ +AR + + VV+WTV++ GYV ARE+F RMP +N FV ++M+
Sbjct: 167 GDMAEARRWFEATPPGMRTVVTWTVLVQGYVCAGDMETAREVFDRMPA--RNAFVWSSMV 224
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
TG+ K G E AR +F+RI ++ V++NA+IAGYAQ G +E+AL F M++ ++PD+
Sbjct: 225 TGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEF 284
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T+ S+ +AC+ L L +G++ H + + N V N +I MY++CG + + F +
Sbjct: 285 TMASLLSACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSM 344
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
N WNT+I+A A HG ++AL F QM +G P+ IT L++L AC H G V+E +
Sbjct: 345 RWKNNECWNTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGL 404
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
+F + YG+ EHY CLVD+L RAG+L++A++I M E + +WGSLL AC +
Sbjct: 405 QIFN-KLDAYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLGACRV 463
Query: 486 NLNVELGELAAKKMRELD----PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
+ + E+ L +++ L N A Y+ML+N+ AA+ W ++R M +GV K
Sbjct: 464 HRDAEMSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQAEQMRRKMARRGVEKT 523
Query: 542 CAYSWIEIG 550
S +E+G
Sbjct: 524 PGCSSLELG 532
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 200/417 (47%), Gaps = 47/417 (11%)
Query: 13 KRILFPPILRIL------STPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKI 66
+R P+L +L S+P G + L F+ + V +S + G +
Sbjct: 49 RRTHHQPLLPVLLKAAAASSPAELGLGKSLHAEALKSAFARD-LLVGTTIVSMYCKCGAL 107
Query: 67 SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND 126
+ AR+ FD+M ++VI++NA++ GY G + + LF M V+W +I G +
Sbjct: 108 ADARRAFDEMPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVTWATLIRGFAEKG 167
Query: 127 RIDDAFDYFQAMPE--RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+ +A +F+A P R T+ ++ G++ G +E A +F++MP RN +++M+ G+
Sbjct: 168 DMAEARRWFEATPPGMRTVVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVWSSMVTGY 227
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----- 233
K G+ ++ARA+ D + +N+V+W +I GY + +A E F+ M PD
Sbjct: 228 FKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEFTMA 287
Query: 234 ------------------YD--------KNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+D KN FV+ +I + K G L +AR +F+ ++ K
Sbjct: 288 SLLSACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWK 347
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ +N MI+ A +G ++EAL LF M + +P+ T+++V AC+ ++EG Q
Sbjct: 348 NNECWNTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGLQIF 407
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
+ G EA V ++ + R G + ++ E+ PN V W +++ A H
Sbjct: 408 NKLDAYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLGACRVH 464
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 27/274 (9%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ +++ V T +++ +CK G L +AR F+ + ++ +S+NA++AGYA G + AL LF
Sbjct: 87 FARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVISYNALLAGYAVAGDMDGALALFG 146
Query: 294 GMI----------------KMDM---------QPDDATLVSVFTACSALQLLNEGRQSHV 328
GM K DM P V +T + ++
Sbjct: 147 GMRSWTHVTWATLIRGFAEKGDMAEARRWFEATPPGMRTVVTWTVLVQGYVCAGDMETAR 206
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
V N V ++++T Y + G ++ F +I + NLV+WN +IA +AQ G E+
Sbjct: 207 EVFDRMPARNAFVWSSMVTGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQ 266
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL F M PD T SLLSAC G + + + + + + + I + L+
Sbjct: 267 ALEAFHLMLQERVKPDEFTMASLLSACAQLGSLEQGKKVHDFINQEH-IRKNHFVMNGLI 325
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
D+ ++ G L A I M ++ + W ++++A
Sbjct: 326 DMYAKCGDLAHARYIFDSMRWK-NNECWNTMISA 358
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 275 MIAGYAQNGVAEEALRLFSGMI--KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
++ YA + EA +++ + + QP L+ A S +L G+ H ++
Sbjct: 26 LVKEYASQSLVREAALVYARNLPRRTHHQPLLPVLLKAAAASSPAEL-GLGKSLHAEALK 84
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+ F ++ V +++MY +CG + D+ AF ++ N++S+N ++A +A G + AL
Sbjct: 85 SAFARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVISYNALLAGYAVAGDMDGALAL 144
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F G+ + +T+ +L+ G + E+ FE + + +T LV
Sbjct: 145 FG--GMRSWTH--VTWATLIRGFAEKGDMAEARRWFEATPPGMRTVVT---WTVLVQGYV 197
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLL 480
AG +E A ++ MP + VW S++
Sbjct: 198 CAGDMETAREVFDRMPAR-NAFVWSSMV 224
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 287/542 (52%), Gaps = 46/542 (8%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM----PE 140
NA++ Y ++ +++ +F MP ++++SWN MI+GC N D A + F M E
Sbjct: 235 NALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEE 294
Query: 141 RNTATYNAMI---------------------SGFLKHGRL--------------EEATRL 165
++AT +++ +GF+ L ++
Sbjct: 295 LDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKI 354
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNERF 221
F M ++NV+S+TAM+ + + G DK L M + ++ + T + + NE
Sbjct: 355 FRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELL 414
Query: 222 CEARELF-YRMPDYDKNVFVVT-AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
+ + Y + + + V VT A++ + K G +E A+L+F+ + KD +S+N +I GY
Sbjct: 415 KHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGY 474
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
++N +A EA LF+ M+ + ++P+ T+ + A ++L L GR+ H +R G+ +
Sbjct: 475 SRNNLANEAFSLFTEML-LQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDD 533
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
V NA+I MY +CG +L + F ++ + NL+SW ++A + HG A+ F QM ++
Sbjct: 534 FVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVS 593
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
G PD +F ++L AC H+G +E F+ M K + I P +HYTC+VD+L G L++
Sbjct: 594 GIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKE 653
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
A++ MP E D+ +W SLL C I+ NV+L E A+++ EL+P+N+ YV+L+N+YA
Sbjct: 654 AYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAE 713
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQ 579
A W V +++ + +G+ + SWIE KVH F+ + +HP +I L + +
Sbjct: 714 AERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKR 773
Query: 580 MK 581
M+
Sbjct: 774 MQ 775
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 19/342 (5%)
Query: 153 FLKHGRLEEATRLFEQMPR-RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+LK G LE A R+F++MP+ +V +TA++ G+ K G++ + L M V
Sbjct: 139 YLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYT 198
Query: 212 ITGYVK---NERFCEARELFYRMPD---YDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
I+ +K E E+ + + + + V A++ + K ++A L+F+ +
Sbjct: 199 ISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMP 258
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+D +S+N+MI+G NG+ ++A+ LF M + D ATL+SV AC+ L LL GR
Sbjct: 259 HRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRV 318
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H ++ GF + S+ N ++ MYS C + FR + N+VSW +I ++ + G
Sbjct: 319 VHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGL 378
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACG-----HAGKVNESMDLFELMVKVYGIIPS 440
Y+K F +MGL G PD S L A GK + M KV +
Sbjct: 379 YDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVT-- 436
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+++ + G +E+A I G+ D W +L+
Sbjct: 437 ----NALMEMYVKCGNMEEAKLIFDGV-VSKDMISWNTLIGG 473
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR + + V NA + + G + A+ +FD + +KD+I+WN +I GY +N E+
Sbjct: 425 IRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAF 484
Query: 102 NLFQSMPVK---NIVSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
+LF M ++ N V+ C++ ++ R A+ + E + NA+I +
Sbjct: 485 SLFTEMLLQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVA-NALIDMY 543
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV 205
+K G L A RLF+++ +N+IS+T M+ G+ G A AL + M +
Sbjct: 544 VKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGI 595
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 13/190 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV NA I + G + AR+LFD+++ K++I+W ++ GY +G +++ LF+ M V
Sbjct: 534 FVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVS 593
Query: 111 NI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEE 161
I S++ ++ C + D+ + +F AM E Y M+ + G L+E
Sbjct: 594 GIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKE 653
Query: 162 ATRLFEQMPRRNVIS-YTAMLDGFMKKGEVDKARALSDY---MSFKNVVSWTVMITGYVK 217
A + MP S + ++L G V A +++ + +N + ++ Y +
Sbjct: 654 AYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAE 713
Query: 218 NERFCEAREL 227
ER+ R+L
Sbjct: 714 AERWEAVRKL 723
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI- 331
N I ++G EEAL G++ D DD + +V CS ++ L G+++H LV
Sbjct: 65 NLHIQRLCRSGDLEEAL----GLLGSD-GVDDRSYGAVLQLCSEVRSLEGGKRAHFLVRA 119
Query: 332 ----RNGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHY 386
R+G + NV + ++ MY +CG + ++ F ++ ++ W +++ +A+ G
Sbjct: 120 SSLGRDGMD-NV-LGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDL 177
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
+ ++ F +M G PD T +L G + + + L+ K+ G
Sbjct: 178 REGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKL-GFGSQCAVGNA 236
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
L+ +++ + + A + GMP D W S+++ C N
Sbjct: 237 LMAFYAKSNRTKDAILVFDGMPHR-DVISWNSMISGCTSN 275
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 264/476 (55%), Gaps = 43/476 (9%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA------------- 193
NA++ + H L A LF++MP R+V+S+T ++DG+ ++G D+A
Sbjct: 180 NALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGL 239
Query: 194 -------RALSDYMSFKNVVSWTVMITGYVKNE-----------------RF---CEARE 226
A+ M ++++ M+ YV + +F ARE
Sbjct: 240 QPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASARE 299
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+F M K+V+ T M+ + K G LE+A LF+ + ++ VS++ MIA Y+Q E
Sbjct: 300 VFDSMAV--KDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPE 357
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH-VLVIRNGFEANVSVCNAV 345
EA+RLF MI+ ++P +A LVSV +AC+ L L+ GR + VI V++ NA
Sbjct: 358 EAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAF 417
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I +Y++CG + F ++ N+VSWN++I A A HG E+ L F Q+ PD
Sbjct: 418 IDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDE 477
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
ITFL LLSAC H+G V+E F+ M +YGI P SEHY C++D+L + G LE+A+++ +
Sbjct: 478 ITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVAK 537
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
GMP E D WG+LL AC + NVE+GE AA K+ +L+P +S +YV++S +YA+ W
Sbjct: 538 GMPMETDEAGWGALLNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYASKNKWDQ 597
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
V +R+LM+E+GV K S IE+ K H FL D+SH + I+ LK +K
Sbjct: 598 VKILRVLMRERGVKKNPGCSSIEVDGKFHEFLVADVSHVHSEDIYAALKNIYFHLK 653
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 145/326 (44%), Gaps = 47/326 (14%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
Q V V NA + + ++ AR LFD+M +DV++W ++ GY + G E+ +F
Sbjct: 173 AQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCR 232
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT---------YNAMISGFLKHG 157
M V + N + + + F M R A NA+I F K G
Sbjct: 233 MVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFG 292
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
A +F+ M ++V S+T M++ + K G+++ A L D M +N VSW+ MI Y +
Sbjct: 293 CAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQ 352
Query: 218 NERFCEARELFYRMPD-----------------------------YD------KNVFVV- 241
+ EA LF M + YD K V V
Sbjct: 353 ANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVN 412
Query: 242 --TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
A I + K G + A LF + ++ VS+N+MI +A +G +EE LRLF +
Sbjct: 413 LGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTC 472
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQ 325
+ PD+ T + + +ACS L++EGR+
Sbjct: 473 IVPDEITFLGLLSACSHSGLVSEGRR 498
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 25/284 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + NA I + G ++AR++FD M KDV +W ++ Y + G L+ + LF MP
Sbjct: 278 VNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPR 337
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNA----MISGFLKHGRLEEATRL 165
+N VSW+CMIA ++ ++A F+AM E NA ++S + G L+ +
Sbjct: 338 RNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWI 397
Query: 166 FEQ--MPRRNVISY---TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
++ + + V++ A +D + K G+ D A L M+ +NVVSW MI + + +
Sbjct: 398 YDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQ 457
Query: 221 FCEARELFYRMPDY----DKNVFVVTAMITGFCKVGMLENARLLFER------IQPKDCV 270
E LF ++ D+ F+ +++ G++ R F+ I+PK
Sbjct: 458 SEEVLRLFEQLKGTCIVPDEITFL--GLLSACSHSGLVSEGRRYFKEMKLIYGIEPKS-E 514
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ MI + G+ EEA + G M M+ D+A ++ AC
Sbjct: 515 HYACMIDLLGKIGLLEEAFEVAKG---MPMETDEAGWGALLNAC 555
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 307/582 (52%), Gaps = 37/582 (6%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVF-----VNNAKISALSRAGKISAARQ 71
FP +LR +CG + + L +Y F V NA I+ + G I +AR
Sbjct: 198 FPCVLR------TCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARL 251
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNCMIAGC--IDN 125
+FD+M +D I+WNA+I+GY++N E LF M ++++ +I+ C + +
Sbjct: 252 VFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGD 311
Query: 126 DRIDDAFDYF--QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
+R+ + + + N++I G +EA +F +M ++++S+TAM+ G
Sbjct: 312 ERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISG 371
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL---------FYRMPDY 234
+ K G +KA M + VV + I + C L F
Sbjct: 372 YEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSA---CAGLGLLDKGIMLHEFADRTGL 428
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
V V ++I + K ++ A +F RI K+ +S+ ++I G N + EAL F
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQ 488
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
MI + ++P+ TLVSV +AC+ + L+ G++ H +R G + + NA++ MY RCG
Sbjct: 489 MI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGR 547
Query: 355 ILDSELAFRQIHS--PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
+ E A+ Q +S ++ SWN ++ +AQ G A+ F +M + +PD ITF SLL
Sbjct: 548 M---EPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLL 604
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC +G V + ++ FE M + I P+ +HY +VD+L RAG+LE A++ + MP + D
Sbjct: 605 CACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPD 664
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
+WG+LL AC I NVELGELAA+ + E+D ++ Y++L NLYA +G W +V RVR +
Sbjct: 665 PAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKI 724
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
M+E +T SW+E+ +VH FL GD HP I +I+ L+
Sbjct: 725 MRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLE 766
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 228/451 (50%), Gaps = 26/451 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V + NA +S R G + A +F +M +D+ +WN ++ GY + G+ E+ NL+ M
Sbjct: 129 VRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188
Query: 108 --PVKNIVSWNCMIAGC---IDNDRIDDA-FDYFQAMPERNTATYNAMISGFLKHGRLEE 161
++ ++ C++ C D R + + E + NA+I+ ++K G +
Sbjct: 189 VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----SDYMSFKNVVSWTVMITG--Y 215
A +F++MPRR+ IS+ AM+ G+ + + L ++ ++++ T +I+
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ +ER + + V V ++I VG + A ++F +++ KD VS+ AM
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+GY +NG+ E+A+ ++ M + PD+ T+ SV +AC+ L LL++G H R G
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGL 428
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ V V N++I MYS+C I + F +I + N++SW +II + +AL FF Q
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQ 488
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY----GIIPSSEHYTCLVDIL 451
M L+ P+ +T +S+LSAC G ++ ++ ++ G +P++ L+D+
Sbjct: 489 MILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNA-----LLDMY 542
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
R G++E AW Q E D W LL
Sbjct: 543 VRCGRMEPAWN--QFNSCEKDVASWNILLTG 571
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 149/305 (48%), Gaps = 14/305 (4%)
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE---ARELFYRMPDYDKN------ 237
KG+++KA D M V +V Y+ R CE A R+ Y
Sbjct: 72 KGDLEKALIHLDSMQELQV---SVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLG 128
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
V + A+++ F + G L A +F ++ +D S+N ++ GYA+ G +EAL L+ M+
Sbjct: 129 VRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+ ++PD T V C L L GR+ H+ VIR GFE++V V NA+ITMY +CG I
Sbjct: 189 VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ L F ++ + +SWN +I+ + ++ + L F M DPD +T S++SAC
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
G ++ ++K G + L+ + S G ++A + M F+ D W
Sbjct: 309 LGDERLGREVHGYVIKT-GFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK-DLVSWT 366
Query: 478 SLLAA 482
++++
Sbjct: 367 AMISG 371
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 2/210 (0%)
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N++I G E+AL M ++ + ++ T +++ C + +EG + H V +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
V + NA+++M+ R G ++++ F ++ +L SWN ++ +A+ G++++AL
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
+ +M G PD TF +L CG + ++ L V YG + L+ +
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREV-HLHVIRYGFESDVDVVNALITMYV 241
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ G + A + MP D W ++++
Sbjct: 242 KCGDIFSARLVFDRMP-RRDRISWNAMISG 270
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/416 (38%), Positives = 248/416 (59%), Gaps = 5/416 (1%)
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
F M ERN ++N+M++G+LK G L A R+F+++P+++VIS+ +M+ G+ + G+++KA
Sbjct: 166 FDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKAS 225
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
+L M +N SW MI+G+V+ AR F MP KN MI+G+ K G +
Sbjct: 226 SLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQ--KNNVSWMTMISGYSKCGDV 283
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK--MDMQPDDATLVSVFT 312
++A LF+++ KD + FNAMIA YAQN EAL LF+ M+ +++QPD+ TL SV +
Sbjct: 284 DSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVIS 343
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
ACS L L G + R G E + + A++ +Y++CG I + F + +LV+
Sbjct: 344 ACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVA 403
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
+ +I +G A+ F +M P+ ITF+ LL+A HAG V E F M
Sbjct: 404 YTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMK 463
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
K Y ++PS +HY +VD+ RAG+L++A ++ + MP + GVWG+LL AC ++ NVE G
Sbjct: 464 K-YNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFG 522
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
E+AA+ EL+P + +LSN+YA+ W DV R+R + KE+G +K SW+E
Sbjct: 523 EIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 200/404 (49%), Gaps = 42/404 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V A + + G + AR++FD+M ++V++WN+++ GY ++G L ++ +F +P
Sbjct: 143 IYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQ 202
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K+++SWN MI+G ++ A FQ MPERN A++NAMISG ++ G ++ A F+ M
Sbjct: 203 KDVISWNSMISGYARAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAM 262
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P++N +S+ M+ G+ K G+VD A L D + K+++ + MI Y +N R EA LF
Sbjct: 263 PQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFN 322
Query: 230 RM--------PD-------------------------------YDKNVFVVTAMITGFCK 250
M PD + + + TA++ + K
Sbjct: 323 NMLNPYVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAK 382
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G ++ A LF ++ KD V++ AMI G NG A +A++LF M+ + P+ T + +
Sbjct: 383 CGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGL 442
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPN 369
TA + L+ EG + + + +V ++ ++ R G + ++ EL P+
Sbjct: 443 LTAYNHAGLVEEGYRCFTSMKKYNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPH 502
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
W ++ A H + E I + +PD + SLLS
Sbjct: 503 AGVWGALLLACRLHNNVEFGEI--AAQHCFELEPDTTGYRSLLS 544
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ D S+ I Q+G +EA L+ M + + P L S AC+ + G
Sbjct: 66 KSPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGI 125
Query: 325 QSHVLVIRNGFEA---NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
H V + GF + V A++ Y + G + + F ++ N+VSWN+++A +
Sbjct: 126 SIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 185
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ G A F ++ D I++ S++S AG + ++ LF+ M
Sbjct: 186 KSGDLVVAQRVFDEIP----QKDVISWNSMISGYARAGDMEKASSLFQQM 231
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 9/180 (5%)
Query: 310 VFTACSALQL-LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-- 366
+F+ S + L + + +Q H L++ +G + I + + ++ +H
Sbjct: 6 LFSKLSTISLSVKQAKQVHALILIHGLSHLEPILARQILISASNYSATVAQYVHSVLHHS 65
Query: 367 -SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
SP+ SW I QHG +++A + QM G P S L AC +
Sbjct: 66 KSPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGI 125
Query: 426 DLFELMVKVYGIIPSSEHY---TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ V+ +G + T LVD + G +E A ++ M E + W S+LA
Sbjct: 126 SIHG-QVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMA-ERNVVSWNSMLAG 183
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 190/590 (32%), Positives = 311/590 (52%), Gaps = 37/590 (6%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVF-----VNNAKISALSRAGKISAARQ 71
FP +LR +CG + + L +Y F V NA I+ + G I +AR
Sbjct: 198 FPCVLR------TCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARL 251
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNCMIAGC--IDN 125
+FD+M +D I+WNA+I+GY++N E LF M ++++ +I+ C + +
Sbjct: 252 VFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGD 311
Query: 126 DRIDDAFDYF--QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
+R+ + + + N++I G +EA +F +M ++++S+TAM+ G
Sbjct: 312 ERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISG 371
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL---------FYRMPDY 234
+ K G +KA M + VV + I + C L F
Sbjct: 372 YEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSA---CAGLGLLDKGIMLHEFADRTGL 428
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
V V ++I + K ++ A +F RI K+ +S+ ++I G N + EAL F
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQ 488
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
MI + ++P+ TLVSV +AC+ + L+ G++ H +R G + + NA++ MY RCG
Sbjct: 489 MI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGR 547
Query: 355 ILDSELAFRQIHS--PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
+ E A+ Q +S ++ SWN ++ +AQ G A+ F +M + +PD ITF SLL
Sbjct: 548 M---EPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLL 604
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC +G V + ++ FE M + I P+ +HY +VD+L RAG+LE A++ + MP + D
Sbjct: 605 CACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPD 664
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
+WG+LL AC I NVELGELAA+ + E+D ++ Y++L NLYA +G W +V RVR +
Sbjct: 665 PAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKI 724
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
M+E +T SW+E+ +VH FL GD HP I +I+ L+ +M++
Sbjct: 725 MRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEA 774
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 228/451 (50%), Gaps = 26/451 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V + NA +S R G + A +F +M +D+ +WN ++ GY + G+ E+ NL+ M
Sbjct: 129 VRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188
Query: 108 --PVKNIVSWNCMIAGC---IDNDRIDDA-FDYFQAMPERNTATYNAMISGFLKHGRLEE 161
++ ++ C++ C D R + + E + NA+I+ ++K G +
Sbjct: 189 VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL----SDYMSFKNVVSWTVMITG--Y 215
A +F++MPRR+ IS+ AM+ G+ + + L ++ ++++ T +I+
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ +ER + + V V ++I VG + A ++F +++ KD VS+ AM
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+GY +NG+ E+A+ ++ M + PD+ T+ SV +AC+ L LL++G H R G
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGL 428
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ V V N++I MYS+C I + F +I + N++SW +II + +AL FF Q
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQ 488
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY----GIIPSSEHYTCLVDIL 451
M L+ P+ +T +S+LSAC G ++ ++ ++ G +P++ L+D+
Sbjct: 489 MILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNA-----LLDMY 542
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
R G++E AW Q E D W LL
Sbjct: 543 VRCGRMEPAWN--QFNSCEKDVASWNILLTG 571
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 2/210 (0%)
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N++I G E+AL M ++ + ++ T +++ C + +EG + H V +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
V + NA+++M+ R G ++++ F ++ +L SWN ++ +A+ G++++AL
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
+ +M G PD TF +L CG + ++ L V YG + L+ +
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREV-HLHVIRYGFESDVDVVNALITMYV 241
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ G + A + MP D W ++++
Sbjct: 242 KCGDIFSARLVFDRMP-RRDRISWNAMISG 270
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 296/548 (54%), Gaps = 16/548 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A I S+ G+++ A ++F + +DV+ W +IITGY QNG + + F M V
Sbjct: 140 MFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVV 199
Query: 110 KNIVSWNCMI-----AGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLE 160
VS + + + C + + R T N++++ + K G +
Sbjct: 200 LEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIR 259
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYV 216
A LF +MP +++IS+++M+ + G A L + M K N V+ +
Sbjct: 260 SAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACA 319
Query: 217 KNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+ E + + +Y + ++ V TA++ + K +NA LF R+ KD VS+
Sbjct: 320 SSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAV 379
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+ +GYA+ G+A ++L +F M+ +PD LV + A S L ++ + H V ++G
Sbjct: 380 LFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSG 439
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F+ N + ++I +Y++C I ++ F+ + ++V+W++IIAA+ HG E+AL F
Sbjct: 440 FDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFY 499
Query: 395 QMGLNG-FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
QM + P+ +TF+S+LSAC HAG + E + +F +MV Y ++P++EHY +VD+L R
Sbjct: 500 QMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGR 559
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
G+L+KA + MP +A VWG+LL AC I+ N+++GELAA + LDP ++ Y +L
Sbjct: 560 MGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLL 619
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SN+Y W D ++R L+KE K S +EI N+VH F+ D H D+I+ L
Sbjct: 620 SNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYGML 679
Query: 574 KRASVQMK 581
++ +MK
Sbjct: 680 RKLDARMK 687
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 211/451 (46%), Gaps = 42/451 (9%)
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI-------- 112
+R + A +LF++ K V WNA++ Y+ G E+ +LF M I
Sbjct: 47 ARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNY 106
Query: 113 --------------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
+ MI G + +ID+ D F +A+I + K G+
Sbjct: 107 TVSIALKSCSGLQKLELGKMIHGFLKKKKIDN--DMFVG---------SALIELYSKCGQ 155
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF-----KNVVSWTVMIT 213
+ +A ++F + P+++V+ +T+++ G+ + G + A A M + V+ +
Sbjct: 156 MNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAAS 215
Query: 214 GYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ F R + F + +D + + +++ + K G + +A LF + KD +S
Sbjct: 216 ACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIIS 275
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+++M+A YA NG AL LF+ MI ++ + T++S AC++ L EG+ H L +
Sbjct: 276 WSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAV 335
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
GFE +++V A++ MY +C ++ F ++ ++VSW + + +A+ G K+L
Sbjct: 336 NYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLG 395
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
F M G PD I + +L+A G V +++ L + K G + L+++
Sbjct: 396 VFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKS-GFDNNEFIGASLIELY 454
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ ++ A ++ +GM D W S++AA
Sbjct: 455 AKCSSIDNANKVFKGMR-RKDVVTWSSIIAA 484
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 18/253 (7%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM--- 295
FVVT + + + L +A LFE K +NA++ Y G E L LF M
Sbjct: 37 FVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNAD 96
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ +PD+ T+ +CS LQ L G+ H + + + ++ V +A+I +YS+CG +
Sbjct: 97 AITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQM 156
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSA 414
D+ F + ++V W +II + Q+G E AL FFS+M L PD +T +S SA
Sbjct: 157 NDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASA 216
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYT--CL----VDILSRAGQLEKAWQITQGMP 468
C + F L V+G + T CL +++ + G + A + + MP
Sbjct: 217 CAQ-------LSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMP 269
Query: 469 FEADTGVWGSLLA 481
++ D W S++A
Sbjct: 270 YK-DIISWSSMVA 281
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 81/202 (40%), Gaps = 21/202 (10%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
M+ D + + T CS + + Q H ++ G + V + +Y+R + +
Sbjct: 1 MKRRDLLVKLLETCCSKISI----PQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAH 56
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD---PDGITFLSLLSACG 416
F + + WN ++ ++ G + + L F QM + PD T L +C
Sbjct: 57 KLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCS 116
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSE------HYTCLVDILSRAGQLEKAWQITQGMPFE 470
K+ EL ++G + + + L+++ S+ GQ+ A ++ P +
Sbjct: 117 GLQKL-------ELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYP-K 168
Query: 471 ADTGVWGSLLAACVINLNVELG 492
D +W S++ N + EL
Sbjct: 169 QDVVLWTSIITGYEQNGSPELA 190
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 285/548 (52%), Gaps = 52/548 (9%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN--------- 116
I AR + DQ + +WN++I Y +G Q S L+ M + N
Sbjct: 43 IDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKA 102
Query: 117 CMIAGCI-DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
C G + + ++I + + N++I + K RL+ A ++ M R+ +
Sbjct: 103 CSTLGSVLEGEQIHT--HVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEV 160
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMITGYVKNERFCEARELFYRM--- 231
S+ +++ G+++ G+V+KAR L + M + NVV WT MI GY K F E LF +M
Sbjct: 161 SWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVS 220
Query: 232 -----P----------------------------DYDK---NVFVVTAMITGFCKVGMLE 255
P D +K N +VTA+I + K G +E
Sbjct: 221 ADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVE 280
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A +F+ + K+ S+NA+I G Q G+ EEA+ L+ M ++P++ TLV+V +AC+
Sbjct: 281 KAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACA 340
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L L GR+ H+ + RNG + NV + A++ MY++CG I D+ L F + ++ WN
Sbjct: 341 GLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNA 400
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+I A HG +L FSQM G P+ +TF+ +LSAC H+G V E F M +
Sbjct: 401 MILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKH 460
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
G+ P EHY C+VD+L RAG L++A+++ Q M D+ +WG+LL+AC I+ N+EL +
Sbjct: 461 GLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKI 520
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
++ + N ++LSN+YA++G W+DV RVR +KE+ + K SW+E+ VH
Sbjct: 521 SETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHR 580
Query: 556 FLGGDMSH 563
F+ D +H
Sbjct: 581 FVVEDTTH 588
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 213/448 (47%), Gaps = 55/448 (12%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQM 76
FP +L+ ST S ++ L RL +FV N+ I + ++ +AR +D M
Sbjct: 96 FPFVLKACSTLGSVLEGEQIHTHVL-RLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDM 154
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPV-KNIVSWNCMIAGCIDNDRIDDAFDYF 135
+D ++WN+II+GY Q G ++++++LF+ MP+ +N+V W MI G + F
Sbjct: 155 GFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLF 214
Query: 136 QAM------PERNTATYNAMISGF-----LKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+ M + N AT ++S + GR ++P N I TA++D +
Sbjct: 215 RQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIP-LNTILVTALIDMY 273
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----- 233
K G+V+KA + D +S KN+ SW +ITG V+ EA +L+ M P+
Sbjct: 274 SKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLV 333
Query: 234 --------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
D NV + TA++ + K G +++A L+F + K
Sbjct: 334 NVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEK 393
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR-QS 326
D +NAMI G A +G ++L +FS M++ +QP+D T + V +AC+ L+ EGR Q
Sbjct: 394 DVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQF 453
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+ ++G + ++ + R G + ++ EL + P+ + W +++A H +
Sbjct: 454 SSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRN 513
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLS 413
E A S+ + DP+ I F LLS
Sbjct: 514 LELA-DKISETIMASQDPN-IGFCILLS 539
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 152/351 (43%), Gaps = 59/351 (16%)
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
T +I + ++ AR + ++ S+N++I Y +G + +L L+ M++ +
Sbjct: 31 THLIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTK 90
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
P + T V ACS L + EG Q H V+R GF +++ VCN++I MY +C + +
Sbjct: 91 PSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNF 150
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL-----------NGF--------- 401
+ + + VSWN+II+ + Q G EKA F +M + NG+
Sbjct: 151 WDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEM 210
Query: 402 --------------DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
P+ T + LLSAC E + + V I ++ T L
Sbjct: 211 LSLFRQMLVSADEVQPNAATMVCLLSACSTLCNY-EVGRFLSVFIDVNKIPLNTILVTAL 269
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
+D+ S+ G +EKAW+I G+ + + W +++ CV L E A R + Q+
Sbjct: 270 IDMYSKCGDVEKAWRIFDGVSCK-NLPSWNAIITGCV---QGGLLEEAIDLYRHMKAQSV 325
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
++T V +L G+ +E+G +VH +LG
Sbjct: 326 KP--------------NEITLVNVLSACAGLGA------LELGREVHLYLG 356
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 296/566 (52%), Gaps = 56/566 (9%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
CL++ + V ++ + ++ + A +LFD+M KDV WN +I+ Y+Q+G +E
Sbjct: 131 CLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEE 190
Query: 100 SKNLFQSMP----VKNIVSWNCMIAGC---IDNDRIDDAFDYFQAMPER-NTATYNAMIS 151
+ F M + V+ I+ C +D DR + R ++ A++
Sbjct: 191 ALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVD 250
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV- 210
+ K G+LE A +FEQMP + V+++ +M++G+ KG+ +S FK + S V
Sbjct: 251 MYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGD-----GISCIQLFKRMYSEGVK 305
Query: 211 -----------------------MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
+ GY+ R PD +F+ ++++
Sbjct: 306 PTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRI---------QPD----IFLNSSLMDL 352
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K G +E+A +F+ + VS+N MI+GY G +ALRLF M K ++PD T
Sbjct: 353 YFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITF 412
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
SV ACS L L +GR+ H L++ N V A++ MY++CG + ++ F+ +
Sbjct: 413 TSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPE 472
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+LVSW ++I A+ HG +AL F++M + PD +TFL++LSAC HAG V++ +
Sbjct: 473 RDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYH 532
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP-FEADTGVWGSLLAACVIN 486
F M+ VYGIIP EHY+CL+ +L RAG+L +A++I Q P D + +L +AC ++
Sbjct: 533 FNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLH 592
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
N++LG A+ + + DP +S+ Y++LSN+YA+ G W +V VR MK+ G+ K SW
Sbjct: 593 KNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSW 652
Query: 547 IEIGNKVHYFLGGDMSHPCIDKIHLE 572
IEI K+ F D SH HLE
Sbjct: 653 IEINEKIVPFFVEDNSH-----YHLE 673
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 131/246 (53%), Gaps = 4/246 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+V+V +I+ + + + A+ +F+ I+ P + N ++AGY +N + +EAL LF +
Sbjct: 37 DVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKL 96
Query: 296 IKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
+ ++PD T SV AC L+ + G+ H +++ G ++ V ++++ MY++C
Sbjct: 97 MCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNE 156
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ F ++ ++ WNT+I+ + Q G +E+AL +F M GF+PD +T + +S+
Sbjct: 157 FECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISS 216
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C ++ ++ + +V G S LVD+ + GQLE A ++ + MP +
Sbjct: 217 CARLLDLDRGREIHKELVNS-GFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVA 275
Query: 475 VWGSLL 480
W S++
Sbjct: 276 -WNSMI 280
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 284/538 (52%), Gaps = 53/538 (9%)
Query: 60 LSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
L R G+ R L D NA+I+ Y G + ++ +F +M + +VSWN +I
Sbjct: 123 LGRHGRAVHCRALAAGFG-GDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVI 181
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH---------GRLEEATRLFEQMP 170
AGC+ N + A + F M A + L GR RL E
Sbjct: 182 AGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGR--AVHRLVEDKG 239
Query: 171 RRNVISY-TAMLDGFMKKGEVDKARALSDYMSF-KNVVSWTVMITGYVKNERFCEARELF 228
+ ++ A++D + K ++ AR + D+ K+VVSWT MI YV N+R EA L
Sbjct: 240 LGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLG 299
Query: 229 YRM-------PD-------------------------------YDKNVFVVTAMITGFCK 250
+M P+ ++ V TA+I + +
Sbjct: 300 CQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYAR 359
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G ++ RL ER + ++NA ++GY +G ++A+ LF MI ++PD AT+ S+
Sbjct: 360 CGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASI 418
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
A + L EG+ H ++ GF + + +I +YS+ G + + F+ + ++
Sbjct: 419 LPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDV 478
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
V+W TIIA ++ HGH A++ + +M +G P+ +T +LL AC HAG ++E + +F+
Sbjct: 479 VAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKD 538
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M V+G++P+ EHY+CLVD+L RAG++E+A ++ Q MPFE T VWG+LL ACV++ NVE
Sbjct: 539 MRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVE 598
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
GE+AAK++ +LDP+N+ YV+L N+YAAA WRDV VR +M E+G+ K+ S +E
Sbjct: 599 FGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVE 656
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 6/240 (2%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSF-NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+C G +A L ++ VSF N+++ Y G EAL ++S M D T
Sbjct: 55 YCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFD----HLT 110
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
AC+ L+L GR H + GF + V NA+I+MY CG + +E F +
Sbjct: 111 FPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMR 170
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+ +VSWN +IA ++G+ E+AL F +M +G D T +S+L AC A +N
Sbjct: 171 NRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRA 230
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ L V+ G+ L+D+ + LE A ++ + D W +++ A V+N
Sbjct: 231 VHRL-VEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLN 289
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 160/362 (44%), Gaps = 29/362 (8%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMT-TKDVITWNAIITGYWQNGFLQESKNLFQSM 107
YV V NA I + + AR++FD KDV++W A+I Y N E+ +L M
Sbjct: 243 YVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQM 302
Query: 108 PVK-----NIVSWNCMIAGCID-----NDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
+ N V+ +++ C + + A + + + A A+I + + G
Sbjct: 303 LMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGL-KSDIAVETALIDAYARCG 361
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMIT 213
+++ E+ R ++ A L G+ G KA L M ++V + ++
Sbjct: 362 KMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILP 420
Query: 214 GYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
Y ++ E + + F + ++ + T +I + K G L+ A LF+ + KD V+
Sbjct: 421 AYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVA 480
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ +IAGY+ +G A A+ L+ M++ +P+ T+ ++ ACS +++EG + +
Sbjct: 481 WTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKV-FKDM 539
Query: 332 RN--GFEANVSVCNAVITMYSRCGGILDSELAFRQIH----SPNLVSWNTIIAAFAQHGH 385
RN G N + ++ M R G I E A R I P+ W ++ A H +
Sbjct: 540 RNVHGLMPNGEHYSCLVDMLGRAGRI---EEAHRLIQDMPFEPSTSVWGALLGACVLHKN 596
Query: 386 YE 387
E
Sbjct: 597 VE 598
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 184/593 (31%), Positives = 311/593 (52%), Gaps = 57/593 (9%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F+ +V + A IS+L KI A + DV N++I+ Y + G +++ +F
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHA--MVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFD---YFQAM------PERNTATYNAMISGFLK 155
+ MP ++IVSWN MI+G + + D F F+ M P+R +T +A+ G
Sbjct: 189 EEMPERDIVSWNSMISGYLA---LGDGFSSLMLFKEMLKCGFKPDR-FSTMSAL--GACS 242
Query: 156 H------GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
H G+ + ++ +V+ T++LD + K GEV A + + M +N+V+W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 210 VMITGYVKNERFCEARELFYRM-------PD---------------------------YD 235
VMI Y +N R +A F +M PD +
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFL 362
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
++ + TA+I + + G L++A ++F+R+ K+ +S+N++IA Y QNG AL LF +
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ PD T+ S+ A + L+EGR+ H ++++ + +N + N+++ MY+ CG +
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
D+ F I ++VSWN+II A+A HG ++ FS+M + +P+ TF SLL+AC
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+G V+E + FE M + YGI P EHY C++D++ R G A + + MPF +
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WGSLL A + ++ + E AA+++ +++ N+ YV+L N+YA AG W DV R++LLM+
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVE 588
+G+++ + S +E K H F GD SH +KI+ L S + D +V
Sbjct: 663 KGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVH 715
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 172/362 (47%), Gaps = 14/362 (3%)
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
D ++ + N + GF +E+A +LF++M + + + M+ GF G +
Sbjct: 54 DRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIE 113
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------DYDKNVFVVTAMIT 246
A M F V + T +K+ + E ++ + +V+V ++I+
Sbjct: 114 AVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLIS 173
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ K+G +A +FE + +D VS+N+MI+GY G +L LF M+K +PD +
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFE-ANVSVCNAVITMYSRCGGILDSELAFRQI 365
+S ACS + G++ H +R+ E +V V +++ MYS+ G + +E F +
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG-LNGFDPDGITFLSLLSACGHAGKVNES 424
N+V+WN +I +A++G A + F +M NG PD IT ++LL A + E
Sbjct: 294 IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEG 349
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+ ++ G +P T L+D+ GQL+ A I M E + W S++AA V
Sbjct: 350 RTIHGYAMR-RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYV 407
Query: 485 IN 486
N
Sbjct: 408 QN 409
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 1/280 (0%)
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
+T + GF ++E+A LF+ + D +N MI G+ G+ EA++ +S M+ +
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+ D T V + + + L EG++ H +VI+ GF ++V VCN++I++Y + G D+E
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++ ++VSWN++I+ + G +L+ F +M GF PD + +S L AC H
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
++ V+ T ++D+ S+ G++ A +I GM + + W ++
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMI 305
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
N V L +KM E + V ++ L A+A
Sbjct: 306 GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA 345
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 266/477 (55%), Gaps = 39/477 (8%)
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V ++S+ C I CI ++ FD + R+ ++N+M++G++ G + A LF++
Sbjct: 151 VNALISFYCRILDCISGRKV---FDEAGGV-SRDLVSWNSMVAGYVGCGEMGLAQELFDE 206
Query: 169 MPRRNVISYTAMLDGFMKKGE--VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
MP+R+ S+ A++DG+ K+G VD+AR L D M+ +++V W
Sbjct: 207 MPQRDAFSWGALIDGYGKQGGAGVDRARELFDQMTERDLVCWN----------------- 249
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+MI G+ + G ++ AR LFE + ++ +S++ +I G+ + G A+
Sbjct: 250 ----------------SMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAK 293
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
EAL F M++ ++PD V +AC+ L L +GR H + + ++V V A+I
Sbjct: 294 EALEHFQSMLRCGIRPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALI 353
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MY +CG + + L F + ++V+WN +I HG+ A++ F +M D +
Sbjct: 354 DMYMKCGRMDLAMLIFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDDL 413
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
+ L++L+AC HAG V+E +++F M K +GI P EHY LVD+L RAG+L++A +
Sbjct: 414 SLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIET 473
Query: 467 MPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
MP E +WGSLLAAC + VEL EL+ +++ L +S VYV+LSN+YA GMW DV
Sbjct: 474 MPMEPTPELWGSLLAACRSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGMWGDV 533
Query: 527 TRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
R+R LM ++G+ K S IE+ ++H F+ G SH C D+I+L L S + S+
Sbjct: 534 LRIRKLMSDEGMRKDIGRSVIEVDGEIHEFVNGGGSHLCTDEIYLMLWNLSKMVASI 590
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 194/406 (47%), Gaps = 15/406 (3%)
Query: 17 FPPILRILSTPDSC-GNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQ 75
FP +L+ C H+ +R +F NA IS R + R++FD+
Sbjct: 116 FPAVLKACGCAPGCRAGLLVHAEA--VRRGLGADLFTVNALISFYCRILDCISGRKVFDE 173
Query: 76 M--TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND--RIDDA 131
++D+++WN+++ GY G + ++ LF MP ++ SW +I G +D A
Sbjct: 174 AGGVSRDLVSWNSMVAGYVGCGEMGLAQELFDEMPQRDAFSWGALIDGYGKQGGAGVDRA 233
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
+ F M ER+ +N+MI G+ +HGR++EA LFE+MP RNVIS++ ++DG ++ GE
Sbjct: 234 RELFDQMTERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAK 293
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK------NVFVVTAMI 245
+A M + V G V A E + Y + +V V TA+I
Sbjct: 294 EALEHFQSMLRCGIRPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALI 353
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K G ++ A L+FE + + V++N MI G +G +A+ LF M + DD
Sbjct: 354 DMYMKCGRMDLAMLIFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDDL 413
Query: 306 TLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
+L+++ TAC+ L++EG + H + G + V A++ + R G + + A
Sbjct: 414 SLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIET 473
Query: 365 IH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
+ P W +++AA H E A + ++ G D G+ L
Sbjct: 474 MPMEPTPELWGSLLAACRSHSCVELAELSVERLANLGADDSGVYVL 519
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 20/231 (8%)
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+D +N I +A G AL F+ M ++PD T +V AC G
Sbjct: 77 RDPFPWNTAIRLHAP-GRPRAALLYFARMRSCGVRPDAYTFPAVLKACGCAPGCRAGLLV 135
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIAAFAQHG 384
H +R G A++ NA+I+ Y R + F + S +LVSWN+++A + G
Sbjct: 136 HAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFDEAGGVSRDLVSWNSMVAGYVGCG 195
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG--KVNESMDLFELMVKVYGIIPSSE 442
A F +M D ++ +L+ G G V+ + +LF+ M + +
Sbjct: 196 EMGLAQELFDEMPQR----DAFSWGALIDGYGKQGGAGVDRARELFDQMTERDLVC---- 247
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+ ++D +R G++++A + + MP E + W + VI+ +V GE
Sbjct: 248 -WNSMIDGYARHGRMDEARSLFEEMP-ERNVISW-----SIVIDGHVRCGE 291
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/559 (30%), Positives = 299/559 (53%), Gaps = 18/559 (3%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++RL V + N+ I SR GK+ +R++F+ M +++ +WN+I++ Y + G++ ++
Sbjct: 115 VLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDA 174
Query: 101 KNLFQSMPV----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISG 152
L M + +IV+WN +++G DA + M + +T++ ++++
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 153 FLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
+ G L+ + + R +V T ++D ++K G + AR + D M KN+V+W
Sbjct: 235 VAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAW 294
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQP 266
+++G +A L RM +T ++ +G+ +G E A + +++
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 267 K----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
K + VS+ A+ +G ++NG AL++F M + + P+ AT+ ++ L LL+
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHS 414
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G++ H +R + V A++ MY + G + + F I + +L SWN ++ +A
Sbjct: 415 GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAM 474
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G E+ + FS M G +PD ITF S+LS C ++G V E F+LM YGIIP+ E
Sbjct: 475 FGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIE 534
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
H +C+VD+L R+G L++AW Q M + D +WG+ L++C I+ ++EL E+A K+++ L
Sbjct: 535 HCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVL 594
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P NSA Y+M+ NLY+ W DV R+R LM+ V Q +SWI+I VH F +
Sbjct: 595 EPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKT 654
Query: 563 HPCIDKIHLELKRASVQMK 581
HP I+ EL + +MK
Sbjct: 655 HPDEGDIYFELYKLVSEMK 673
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 162/310 (52%), Gaps = 8/310 (2%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
VV+A + + + L A LF+ + +D +++N ++ ++G E+A+ LF M
Sbjct: 25 VVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSG 84
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+ D+T+V + CS + EGRQ H V+R G E+NVS+CN++I MYSR G + S
Sbjct: 85 AKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSR 144
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + NL SWN+I++++ + G+ + A+ +M + G PD +T+ SLLS G
Sbjct: 145 KVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG 204
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+++ + + M ++ G+ PS+ + L+ ++ G L K + G +W +
Sbjct: 205 LSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHL-KLGKAIHGYILRNQ--LWYDV 260
Query: 480 -LAACVINLNVELGELAAKKM--RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
+ +I++ ++ G L +M +D +N + L + + A + +D + + M+++
Sbjct: 261 YVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKE 320
Query: 537 GVTKQCAYSW 546
G+ K A +W
Sbjct: 321 GI-KPDAITW 329
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 101/219 (46%), Gaps = 6/219 (2%)
Query: 323 GRQSHVLVIRNGFE-ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G H +I+ G + ++ V +A + Y RC + + F ++ + ++WN I+
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
+ G++EKA+ F +M +G T + LL C + E + ++++ G+ +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRL-GLESNV 124
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE--LGELAAKKM 499
L+ + SR G+LE + ++ M + + W S+L++ V+ +G L ++
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
L P +LS YA+ G+ +D V M+ G+
Sbjct: 184 CGLKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGL 221
>gi|218201328|gb|EEC83755.1| hypothetical protein OsI_29628 [Oryza sativa Indica Group]
Length = 389
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/290 (47%), Positives = 206/290 (71%), Gaps = 3/290 (1%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF-LQESKN 102
L S++ + +N +I+AL+RAG ++AAR++FD M +D ++WNA++T W+ G L +++
Sbjct: 10 LASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARS 69
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
LF MP +N++SWN +IAGC+ + + A YF P RN A++NAM++G ++ G +E+A
Sbjct: 70 LFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDA 129
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
LF+QMP RNV+SYT M+DG + GEV AR L D M +N+VSW MI+GYV N
Sbjct: 130 RSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLE 189
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
EAR+LF MP +KNV TAMITG+CK G L+NAR LF+ I+ KD +S+NA+I+GY N
Sbjct: 190 EARKLFEAMP--EKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHN 247
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
G+ EEA +L+ M++ ++PD ATL+++ TACS+L LL +GR +H +VI+
Sbjct: 248 GLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIK 297
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 147/304 (48%), Gaps = 42/304 (13%)
Query: 135 FQAMPERNTATYNAMISGFLKHGR-LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
F AMP R+ ++NA+++ + GR L A LF+ MP RNVIS+ +++ G + G++ A
Sbjct: 39 FDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAA 98
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
A +NV SW M+ G V+ +AR LF +MP+ +NV T M+ G + G
Sbjct: 99 SAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPE--RNVVSYTTMVDGLARCGE 156
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
+ +AR LF+ + ++ VS+ AMI+GY N + EEA +LF M
Sbjct: 157 VASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMP----------------- 199
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
E NV C A+IT Y + G + ++ F I + +++SW
Sbjct: 200 ----------------------EKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISW 237
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N II+ + +G E+A + M G PD T ++LL+AC + + +++K
Sbjct: 238 NAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIK 297
Query: 434 VYGI 437
+
Sbjct: 298 AMRV 301
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 343 NAVITMYSRCGGILDSELA-FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
NA++T R G L + + F + S N++SWN+IIA HG A +F++
Sbjct: 51 NALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNV 110
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
++ ++L+ G + ++ LF+ M + + YT +VD L+R G++ A
Sbjct: 111 ----ASWNAMLAGLVRLGSMEDARSLFDQMPERNVV-----SYTTMVDGLARCGEVASAR 161
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV--YVMLSNLYAA 519
++ MP + W ++++ V N +E A+K+ E P+ + V M++ Y
Sbjct: 162 ELFDAMPTR-NLVSWAAMISGYVDNNMLE----EARKLFEAMPEKNVVACTAMITG-YCK 215
Query: 520 AGMWRDVTRVRLLMKEQGVTKQCAYSWIE-IGNKVHYFLG 558
G D+ R L G+ + SW I VH LG
Sbjct: 216 EG---DLQNARRLF--DGIRAKDVISWNAIISGYVHNGLG 250
>gi|302824792|ref|XP_002994036.1| hypothetical protein SELMODRAFT_138059 [Selaginella moellendorffii]
gi|300138139|gb|EFJ04918.1| hypothetical protein SELMODRAFT_138059 [Selaginella moellendorffii]
Length = 524
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 280/506 (55%), Gaps = 14/506 (2%)
Query: 62 RAGKISAARQLFDQMTTKD--VITWNAIITGYWQNGFLQESKNLFQSMP------VKNIV 113
R G +S AR +FD + +KD + NA+IT QNG + +FQSMP ++
Sbjct: 4 RCGSLSDARLVFDSIASKDRSIDLCNAMITTCSQNGDAAGAHTVFQSMPKSRKMRTDDLT 63
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+ N MIA + DA F M R+ T+ A+++ + ++G +A LF+ MPRR
Sbjct: 64 ASNSMIAAYGKAKSVADAKRLFDRMERRDEVTWTAVVAVYAQNGHSRDAKLLFDAMPRRG 123
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
+I TAML + G+ + L M ++V SW V+I+ ++ R +AR +F +MP
Sbjct: 124 IIVATAMLGVCARGGQAHQVWDLFTEMEGRDVFSWGVLISVLSRHGRMQDARFVFDKMPL 183
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++ T IT + K G L+ AR LF+ + D +++ +++ YAQ G++ EA+ LF
Sbjct: 184 --RSTVSWTTTITAYAKCGDLDEARRLFDAMPQPDVITWTSLMTAYAQGGLSREAVELFK 241
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M ++ D + V AC+ L + EGR+ H + G +V V N+++ MY +CG
Sbjct: 242 LMDLEGVEADKYSFSIVLDACARLSDVAEGRRVHRTIAELG-PMDVVVTNSLLNMYGKCG 300
Query: 354 GILDSELAFRQIHSPNLV--SWNTIIAAFAQHGHYEKALIFFSQMGLNGF-DPDGITFLS 410
+ ++ AF + + V +WN +IAA+ ++G +E A F + L+G P+ ITF+
Sbjct: 301 NMAEAVAAFEGVAATQRVVATWNALIAAYTENGWHESAFGAFRALNLDGVVQPNAITFIG 360
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+ +AC H GK+ ++ D F M +G+ P ++HY C+ D+L R G+L ++ ++ MPF
Sbjct: 361 IFTACSHTGKLEDARDYFLCMAPDFGVTPVADHYVCMSDLLGRVGRLVESEELISSMPFH 420
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
D W L+ +C +LN ++ E AA+ + DP + Y++LSN+YAA G +D+ R+R
Sbjct: 421 PDPVAWLGLMGSCRTHLNADVAERAAEHVYVSDPGCPSPYILLSNIYAALGRTKDLLRIR 480
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYF 556
LMK +GV A +++++ +++ F
Sbjct: 481 RLMKMRGVKNNQALAYVQVKDRLVPF 506
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 191/400 (47%), Gaps = 47/400 (11%)
Query: 28 DSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAI 87
D+ G T S R T + +N+ I+A +A ++ A++LFD+M +D +TW A+
Sbjct: 40 DAAGAHTVFQSMPKSRKMRTDDLTASNSMIAAYGKAKSVADAKRLFDRMERRDEVTWTAV 99
Query: 88 ITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN 147
+ Y QNG +++K LF +MP + I+ M+ C + +D F M R+ ++
Sbjct: 100 VAVYAQNGHSRDAKLLFDAMPRRGIIVATAMLGVCARGGQAHQVWDLFTEMEGRDVFSWG 159
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
+IS +HGR+++A +F++MP R+ +S+T + + K G++D+AR L D M +V++
Sbjct: 160 VLISVLSRHGRMQDARFVFDKMPLRSTVSWTTTITAYAKCGDLDEARRLFDAMPQPDVIT 219
Query: 208 WTVMITGYVKNERFCEARELFYRMP----DYDK--------------------------- 236
WT ++T Y + EA ELF M + DK
Sbjct: 220 WTSLMTAYAQGGLSREAVELFKLMDLEGVEADKYSFSIVLDACARLSDVAEGRRVHRTIA 279
Query: 237 -----NVFVVTAMITGFCKVGMLENARLLFERIQPKDCV--SFNAMIAGYAQNGVAEEAL 289
+V V +++ + K G + A FE + V ++NA+IA Y +NG E A
Sbjct: 280 ELGPMDVVVTNSLLNMYGKCGNMAEAVAAFEGVAATQRVVATWNALIAAYTENGWHESAF 339
Query: 290 RLFSGM-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE----ANVSVCNA 344
F + + +QP+ T + +FTACS L + R + L + F A+ VC +
Sbjct: 340 GAFRALNLDGVVQPNAITFIGIFTACSHTGKLEDARD-YFLCMAPDFGVTPVADHYVCMS 398
Query: 345 VITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
+ R G +++S EL P+ V+W ++ + H
Sbjct: 399 --DLLGRVGRLVESEELISSMPFHPDPVAWLGLMGSCRTH 436
>gi|326520249|dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 270/511 (52%), Gaps = 25/511 (4%)
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDND-RIDDAFDYFQAMP--ERNTATYNAMISGFLKH 156
S+ F+ +P +N S+N ++A + DA AMP RN +YN +IS ++
Sbjct: 86 SRTAFEDLPYRNAHSYNNLLAALSRGSATLPDALHLLDAMPASSRNVVSYNTIISALARN 145
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----------- 205
GR EA R+F ++ R + LD F + + +
Sbjct: 146 GRQGEALRVFARLARDRCLGPEVALDRFAVVSVASACAGMGALRPLREMHGAVVVSGVEV 205
Query: 206 --VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
+ M+ Y K R +AR LF +M D + T+MI G+C+ L+ A +F
Sbjct: 206 TVIMANAMVDAYSKAGRMEDARTLFNQMSIQDTVSW--TSMIAGYCRAKRLDEAIRVFHM 263
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ +D +++ A+I+G+ QNG + AL LF M+ M P LVS AC+ L L+ G
Sbjct: 264 MPEQDTIAWTALISGHEQNGEEDAALDLFQQMLVEGMAPTPFALVSSLGACAKLGLVTRG 323
Query: 324 RQSHVLVIRN--GFEA-NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
R+ H ++R G + N+ + NA+I MYS+CG + + L F ++ + +SWN+++ F
Sbjct: 324 REVHGFILRRRIGLDPFNIFIHNALIDMYSKCGDMATAMLVFARMSERDFISWNSMVTGF 383
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
+ +G +++L F +M P +TFL++L+AC HAG V + + E M + +G+ P
Sbjct: 384 SHNGQGKQSLAMFKRMLDAEVQPTYVTFLAVLTACSHAGLVTDGRRILESM-QYHGVEPR 442
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFE---ADTGVWGSLLAACVINLNVELGELAAK 497
+EHY +D L R QLE+A + +G+ TG WG+LL AC ++ N E+ E A+
Sbjct: 443 AEHYASFIDALGRNHQLEEASEFIKGLSSRIGPGTTGSWGALLGACRVHGNTEIAEKVAE 502
Query: 498 KMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
+ +L+P NS YVMLSN+YAAAG W D R+R +MKE+G+ K A SWIE+ + H F+
Sbjct: 503 SLFQLEPGNSGRYVMLSNIYAAAGQWDDARRIRAIMKEKGLRKDQACSWIEVRSAKHMFV 562
Query: 558 GGDMSHPCIDKIHLELKRASVQMKSVDDFVE 588
D SH ++I+ L R M+ V D VE
Sbjct: 563 ADDTSHCEANEIYGMLDRLFDYMRVVVDPVE 593
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 283/538 (52%), Gaps = 53/538 (9%)
Query: 60 LSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
L R G+ R L D NA+I+ Y G + ++ +F +M + +VSWN +I
Sbjct: 123 LGRHGRAVHCRALAAGFG-GDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVI 181
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH---------GRLEEATRLFEQMP 170
AGC+ N + A + F M A + L GR RL E
Sbjct: 182 AGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGR--AVHRLVEDKG 239
Query: 171 RRNVISY-TAMLDGFMKKGEVDKARALSDYMSF-KNVVSWTVMITGYVKNERFCEARELF 228
+ ++ A++D + K ++ AR + D+ K+VVSWT MI YV N+R EA L
Sbjct: 240 LGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLG 299
Query: 229 YRM-------PD-------------------------------YDKNVFVVTAMITGFCK 250
+M P+ ++ V TA+I + +
Sbjct: 300 CQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYAR 359
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G ++ RL ER + ++NA ++GY +G ++A+ LF MI ++PD AT+ S+
Sbjct: 360 CGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASI 418
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
A + L EG+ H ++ GF + + +I +YS+ G + + F+ + ++
Sbjct: 419 LPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDV 478
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
V+W TIIA + HGH A++ + +M +G P+ +T +LL AC HAG ++E + +F+
Sbjct: 479 VAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKD 538
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M V+G++P+ EHY+CLVD+L RAG++E+A ++ Q MPFE T VWG+LL ACV++ NVE
Sbjct: 539 MRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVE 598
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
GE+AAK++ +LDP+N+ YV+L N+YAAA WRDV VR +M E+G+ K+ S +E
Sbjct: 599 FGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVE 656
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 6/240 (2%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSF-NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+C G +A L ++ VSF N+++ Y G EAL ++S M D T
Sbjct: 55 YCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFD----HLT 110
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
AC+ L+L GR H + GF + V NA+I+MY CG + +E F +
Sbjct: 111 FPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMR 170
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+ +VSWN +IA ++G+ E+AL F +M +G D T +S+L AC A +N
Sbjct: 171 NRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRA 230
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ L V+ G+ L+D+ + LE A ++ + D W +++ A V+N
Sbjct: 231 VHRL-VEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLN 289
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 158/362 (43%), Gaps = 29/362 (8%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMT-TKDVITWNAIITGYWQNGFLQESKNLFQSM 107
YV V NA I + + AR++FD KDV++W A+I Y N E+ +L M
Sbjct: 243 YVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQM 302
Query: 108 PVK-----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHG 157
+ N V+ +++ C A A+ R + A A+I + + G
Sbjct: 303 LMSGAAWPNGVTMVYLLSACASMPSGKHA-KCTHALCIRLGLKSDIAVETALIDAYARCG 361
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMIT 213
+++ E+ R ++ A L G+ G KA L M ++V + ++
Sbjct: 362 KMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILP 420
Query: 214 GYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
Y ++ E + + F + ++ + T +I + K G L+ A LF+ + KD V+
Sbjct: 421 AYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVA 480
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ +IAGY +G A A+ L+ M++ +P+ T+ ++ ACS +++EG + +
Sbjct: 481 WTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKV-FKDM 539
Query: 332 RN--GFEANVSVCNAVITMYSRCGGILDSELAFRQIH----SPNLVSWNTIIAAFAQHGH 385
RN G N + ++ M R G I E A R I P+ W ++ A H +
Sbjct: 540 RNVHGLMPNGEHYSCLVDMLGRAGRI---EEAHRLIQDMPFEPSTSVWGALLGACVLHKN 596
Query: 386 YE 387
E
Sbjct: 597 VE 598
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 197/651 (30%), Positives = 307/651 (47%), Gaps = 123/651 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMT---TKDVITWNAIITGYWQNGFLQESKNLF----QS 106
N+ IS S++G ++ A+ +F+ M +DV++W+A++ + NG ++ LF +
Sbjct: 101 NSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEM 160
Query: 107 MPVKNIVSWNCMIAGCIDNDRI-------------------------------------D 129
V N + +I C ++D + +
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF----------EQMPRRNVISYTA 179
+A+ F M E N T+ MI+ ++ G EA R F ++ +V S A
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 180 ---------------------------MLDGFMK---KGEVDKARALSDYMSFKNVVSWT 209
++D + K G VD R + D M +V+SWT
Sbjct: 281 ELENLSLGRQLHSWAIRSGLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWT 340
Query: 210 VMITGYVKNERFC-EARELFYRM-------------------------PDYDKNVF---- 239
+ITGY++N EA LF M P K V
Sbjct: 341 ALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAF 400
Query: 240 ---------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
V ++I+ F K +E+AR FE + K+ VS+N + G +N E A
Sbjct: 401 KRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFE 460
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
L S + + ++ T S+ + + + L +G Q H V++ G N VCNA+I+MYS
Sbjct: 461 LLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYS 520
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG I + F + + N++SW ++I FA+HG E+ L F+QM G P+ +T+++
Sbjct: 521 KCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVA 580
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+LSAC H G V+E F M + + I P EHY C+VD+L RAG L A++ MPF+
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
AD VW + L AC ++ N ELG+LAA+K+ E DP A Y+ LSN+YA+AG W + T +R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMR 700
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
MKE+ + K+ SWIE+G+KVH F GD SHP +I+ EL ++K
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIK 751
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 149/294 (50%), Gaps = 18/294 (6%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPR---RNVISYTAMLDGFMKKG-EVDKARA 195
E ++ YN++IS + K G L +A +FE M R R+V+S++AM+ F G E D +
Sbjct: 94 EPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKL 153
Query: 196 LSDYMSF---KNVVSWTVMITGYVKNERFCEAREL---FYRMPDYDKNVFVVTAMITGFC 249
+++ N +T +I ++ R + + ++ +V V ++I F
Sbjct: 154 FVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 250 K-VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K ENA +F+++ + V++ MI Q G EA+R F M+ + D TL
Sbjct: 214 KGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC---GGILDSELAFRQI 365
SVF+AC+ L+ L+ GRQ H IR+G +V +++ MY++C G + D F ++
Sbjct: 274 SVFSACAELENLSLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 366 HSPNLVSWNTIIAAFAQHGHY-EKALIFFSQMGLNG-FDPDGITFLSLLSACGH 417
+++SW +I + Q+ + +A+ FS+M G +P+ TF S ACG+
Sbjct: 332 QDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 296/555 (53%), Gaps = 28/555 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V N I+ ++ G I AR +F M KD ++WN++ITG QN +++ + SM
Sbjct: 138 VAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRK 197
Query: 110 KNIVSWN---------CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
++ N C GCI + + + + + + N +++ + + RL
Sbjct: 198 TGLMPSNFALISALSSCASLGCILLGQQTHG-EGIKLGLDMDVSVSNTLLALYAETSRLA 256
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKG-----------EVDKARALSDYMSFKNVVSWT 209
E ++F M R+ +S+ ++ G E+ +A + ++F N+++ T
Sbjct: 257 ECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLA-T 315
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI-QPKD 268
V K A L Y + D + + A++ + K G +EN +F R+ + +D
Sbjct: 316 VSSLSTSKLSHQIHALILKYNVKDDNA---IENALLACYGKSGEMENCEEIFSRMSERRD 372
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
VS+N+MI+GY N + +A+ L M++ + D T +V +AC+ + L G + H
Sbjct: 373 EVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHA 432
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
IR E++V + +A++ MYS+CG I + F + NL SWN++I+ +A+HGH +
Sbjct: 433 CAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDN 492
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL F++M L+G PD ITF+ +LSAC H G V+E + F+ M +VYG++P EHY+C+V
Sbjct: 493 ALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMV 552
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI--NLNVELGELAAKKMRELDPQN 506
D+L RAG+L+K MP + + +W ++L AC ELG AA+ + +DPQN
Sbjct: 553 DLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQN 612
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
+ YV+LSN+YA+ G W D+ R R M+E V K+ SW+ + + VH F+ GD SHP
Sbjct: 613 AVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEK 672
Query: 567 DKIHLELKRASVQMK 581
I+ +LK +++
Sbjct: 673 GLIYAKLKELDKKIR 687
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 172/352 (48%), Gaps = 16/352 (4%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +I+ +++ G A +LF++MP RN +++ ++ G+ + G + A + M F+ +
Sbjct: 39 NTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFL 98
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDY-----------DKNVFVVTAMITGFCKVGMLE 255
+ R C+ L+ R D V V +I + K G ++
Sbjct: 99 PNRFAFGSAI---RACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDID 155
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+AR +F + KD VS+N+MI G QN E+A++ ++ M K + P + L+S ++C+
Sbjct: 156 HARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCA 215
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+L + G+Q+H I+ G + +VSV N ++ +Y+ + + + F + + VSWNT
Sbjct: 216 SLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNT 275
Query: 376 IIAAFAQHG-HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I A A G +A+ F +M G+ P+ +TF++LL+ S + L++K
Sbjct: 276 VIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILK- 334
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
Y + + L+ ++G++E +I M D W S+++ + N
Sbjct: 335 YNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHN 386
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 205/476 (43%), Gaps = 70/476 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N I+ R G +AR+LFD+M ++ +TW +I+GY QNG +++ + + M
Sbjct: 35 LFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIF 94
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ + + F + A+ A +M+ + + GR + +
Sbjct: 95 EGF---------------LPNRFAFGSAI----RACQESML--WRRKGRQVHGYAIRTGL 133
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
V +++ + K G++D AR++ M K+ VSW MITG +N+ F +A + +
Sbjct: 134 NDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYN 193
Query: 230 RMPD-------------------------------------YDKNVFVVTAMITGFCKVG 252
M D +V V ++ + +
Sbjct: 194 SMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETS 253
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVA-EEALRLFSGMIKMDMQPDDATLVSVF 311
L + +F + +D VS+N +I A +G + EA+ +F M++ P+ T +++
Sbjct: 254 RLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLL 313
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF-RQIHSPNL 370
S+L Q H L+++ + + ++ NA++ Y + G + + E F R +
Sbjct: 314 ATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDE 373
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
VSWN++I+ + + KA+ M G D TF ++LSAC + M++
Sbjct: 374 VSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHAC 433
Query: 431 MVKVY----GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
++ +I S+ LVD+ S+ G+++ A + MP + W S+++
Sbjct: 434 AIRACLESDVVIGSA-----LVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISG 483
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+D ++F+ +I + ++G +AR LF+ + ++ V++ +I+GY QNG+ E+A +
Sbjct: 31 FDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLK 90
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLL-NEGRQSHVLVIRNGF-EANVSVCNAVITMYSR 351
MI P+ S AC L +GRQ H IR G +A V+V N +I MY++
Sbjct: 91 EMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAK 150
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG I + F + + VSWN++I Q+ +E A+ ++ M G P +S
Sbjct: 151 CGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISA 210
Query: 412 LSACGHAG 419
LS+C G
Sbjct: 211 LSSCASLG 218
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 189/444 (42%), Gaps = 39/444 (8%)
Query: 13 KRILFPPILRILSTPDSCGNF-------TPHSSNCLIRLFSTQYVFVNNAKISALSRAGK 65
K L P ++S SC + H I+L V V+N ++ + +
Sbjct: 197 KTGLMPSNFALISALSSCASLGCILLGQQTHGEG--IKLGLDMDVSVSNTLLALYAETSR 254
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGF-LQESKNLFQSMP----VKNIVSWNCMIA 120
++ +++F M +D ++WN +I +G + E+ +F M N V++ ++A
Sbjct: 255 LAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLA 314
Query: 121 --GCIDNDRIDDAFD--YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVI 175
+ ++ + + + A NA+++ + K G +E +F +M RR+ +
Sbjct: 315 TVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEV 374
Query: 176 SYTAMLDGFMKKGEVDKARALS----------DYMSFKNVVS--WTVMITGYVKNERFCE 223
S+ +M+ G++ + KA L D +F V+S TV C
Sbjct: 375 SWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACA 434
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
R + +V + +A++ + K G ++ A F + ++ S+N+MI+GYA++G
Sbjct: 435 IRACL------ESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHG 488
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVC 342
+ ALRLF+ M PD T V V +ACS + L++EG + + G V
Sbjct: 489 HGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHY 548
Query: 343 NAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
+ ++ + R G + E ++ PN++ W T++ A + + L + L
Sbjct: 549 SCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNM 608
Query: 402 DPDGITFLSLLSACGHAGKVNESM 425
DP LLS +G E M
Sbjct: 609 DPQNAVNYVLLSNMYASGGKWEDM 632
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H+ V+++GF++++ +CN +I +Y R G + + F ++ N V+W +I+ + Q+G
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
E A +M GF P+ F S + AC ESM +V+G +
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRAC------QESMLWRRKGRQVHGYAIRTGLNDA 136
Query: 447 -------LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
L+++ ++ G ++ A + G+ + D+ W S++ N E + M
Sbjct: 137 KVAVGNGLINMYAKCGDIDHARSVF-GLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSM 195
Query: 500 RE--LDPQNSAVYVMLSN 515
R+ L P N A+ LS+
Sbjct: 196 RKTGLMPSNFALISALSS 213
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 255/435 (58%), Gaps = 7/435 (1%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMS 201
+ ++S + K G E+A RLF++MP ++++S+ +++ G +G + R ++
Sbjct: 101 DRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 160
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARL 259
N V+ +++ E + L + VV ++I + K+G L+ A
Sbjct: 161 QPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 220
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LFE + + VS+N+M+ + NG AE+ + LF+ M + + PD AT+V++ AC+ L
Sbjct: 221 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGL 280
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
+ H + R GF A++ + A++ +Y++ G + SE F +I + ++W ++A
Sbjct: 281 GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAG 340
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+A H +A+ F M G + D +TF LLSAC H+G V E FE+M +VY + P
Sbjct: 341 YAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 400
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HY+C+VD+L R+G+LE A+++ + MP E +GVWG+LL AC + NVELG+ A+++
Sbjct: 401 RLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL 460
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
LDP + Y+MLSN+Y+AAG+WRD ++VR LMKE+ +T+ S+IE GNK+H F+ G
Sbjct: 461 LSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVG 520
Query: 560 DMSHPCIDKIHLELK 574
D HP D+IH +L+
Sbjct: 521 DQLHPRSDEIHTKLE 535
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 172/354 (48%), Gaps = 17/354 (4%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ + +S + G A++LFD+M KD+++WN++++G G+L N F M +
Sbjct: 98 FIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTE 157
Query: 111 -----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEE 161
N V+ +++ C D +D+ + + + N++I+ + K G L+
Sbjct: 158 SGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDA 217
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN--- 218
A++LFE+MP R+++S+ +M+ G +K L + M + + ++
Sbjct: 218 ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTD 277
Query: 219 ---ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
R E+ + ++ ++ + TA++ + K+G L + +FE I+ +D +++ AM
Sbjct: 278 TGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAM 337
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNG 334
+AGYA + EA++LF M+K ++ D T + +ACS L+ EG++ ++
Sbjct: 338 LAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYR 397
Query: 335 FEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
E + + ++ + R G + D+ EL P+ W ++ A +G+ E
Sbjct: 398 VEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 451
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 140/270 (51%), Gaps = 7/270 (2%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IK 297
F+ +++ + K+G E+A+ LF+ + KD VS+N++++G + G L F M +
Sbjct: 98 FIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTE 157
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
QP++ TL+SV +AC+ + L+EG+ H +V++ G V N++I MY + G +
Sbjct: 158 SGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDA 217
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F ++ +LVSWN+++ +G+ EK + F+ M G +PD T ++LL AC
Sbjct: 218 ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTD 277
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
G + + + G T L+++ ++ G+L + I + + + D W
Sbjct: 278 TG-LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRDRIAWT 335
Query: 478 SLLAACVINL----NVELGELAAKKMRELD 503
++LA ++ ++L +L K+ E+D
Sbjct: 336 AMLAGYAVHACGREAIKLFDLMVKEGVEVD 365
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 96/176 (54%), Gaps = 6/176 (3%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
+LV ++C+++ + H VI++ ++ + + +++MY + G D++ F ++
Sbjct: 67 SLVFAISSCTSVSYCS---AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL-NGFDPDGITFLSLLSACGHAGKVNES 424
+ +LVSWN++++ + G+ L F +M +G P+ +T LS++SAC G ++E
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
L ++VK+ G+ ++ L+++ + G L+ A Q+ + MP + W S++
Sbjct: 184 KSLHGVVVKL-GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSMV 237
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ + A ++ ++ G+++A+ +F+++ +D I W A++ GY + +E+ LF M
Sbjct: 300 IIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVK 359
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLE 160
+ + V++ +++ C + +++ YF+ M E Y+ M+ + GRLE
Sbjct: 360 EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLE 419
Query: 161 EATRLFEQMP 170
+A L + MP
Sbjct: 420 DAYELIKSMP 429
>gi|147798551|emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 282/526 (53%), Gaps = 24/526 (4%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQES---KNL 103
F+ NA I + S A +F+ M D +++ ++ + G ++E L
Sbjct: 144 FLWNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGL 203
Query: 104 FQSMPV-KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
M + ++ NC++ + + A F M R++ ++N+MI G++KHG ++ A
Sbjct: 204 LGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSA 263
Query: 163 TRLFEQMP--RRNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNVVSWTVMITGYVKNE 219
LF+ MP ++N+IS+ +M+ G+ + E + A L + M ++++SW MI G VK
Sbjct: 264 RELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCG 323
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
+ A LF MP D V M+ G+ K+G ++ AR LF+ + +D +S NAM+AGY
Sbjct: 324 KMENAHHLFNXMPKRD--VVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGY 381
Query: 280 AQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
QNG EAL F M+ ++ P +ATL+ +A + L +EG H + NGF +
Sbjct: 382 VQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLS 441
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+ A+I MY++CG I D+ L + WN IJ A HG E A F +M
Sbjct: 442 EKLGXALIDMYAKCGSI-DNAL---------IDHWNAIJXGLAIHGLGEVAFELFMEMEK 491
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
PB ITF+ +L+AC HAG V E + F LM V+ + P +HY C+VDIL RAG +E
Sbjct: 492 LFVKPBDITFIGVLNACNHAGLVKEGLMXFXLMRXVHKVEPKLQHYGCMVDILGRAGHVE 551
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+ + + MP E + VW +LL+AC + N +GE AK + +D N + YV+LSN+YA
Sbjct: 552 EXKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYA 611
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
GMW DV R+R++MK++ + K S IE+ VH F D SHP
Sbjct: 612 XFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHP 657
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 216/452 (47%), Gaps = 72/452 (15%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+ N + R G + ARQLFD+M +D +++N++I GY ++G ++ ++ LF MP+
Sbjct: 213 VFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDVMPM 272
Query: 110 --KNIVSWNCMIAGCIDNDR-IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
KN++SWN MI+G ++ + A++ F+ MP+R+ ++N+MI G +K G++E A LF
Sbjct: 273 EQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLF 332
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
MP+R+V+S+ M+DG+ K GE+D AR L D M ++V+S M+ GYV+N EA
Sbjct: 333 NXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGXLMEALX 392
Query: 227 LFYRMPDYDKNVFVVTA----MITGFCKVGMLENARLLFERIQPK--------------- 267
F+ M K +F A ++ ++G + L I+
Sbjct: 393 FFHDMLSX-KELFPXNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGXALIDM 451
Query: 268 --DCVS--------FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
C S +NA+J G A +G+ E A LF M K+ ++PBD T + V AC+
Sbjct: 452 YAKCGSIDNALIDHWNAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDITFIGVLNACNHA 511
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNT 375
L+ EG L+ R +H P L +
Sbjct: 512 GLVKEGLMXFXLM--------------------------------RXVHKVEPKLQHYGC 539
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
++ + GH E+ F +M + +P+ + + +LLSAC + + + ++ V
Sbjct: 540 MVDILGRAGHVEEXKKFVEKMPI---EPNDVVWRTLLSACRNHENFTIGEPVAKHLISVD 596
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
PSS Y L +I + G ++I M
Sbjct: 597 SYNPSS--YVLLSNIYAXFGMWNDVYRIRMMM 626
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA--------FRQIHSP- 368
+ L++ Q H +I GF N S+ +I +S E A F + H
Sbjct: 81 KTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQ 140
Query: 369 -NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N WN II +F+ +A F+ M NG D +F +L AC G + E M +
Sbjct: 141 DNPFLWNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQI 200
Query: 428 FELM 431
L+
Sbjct: 201 HGLL 204
>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 304/578 (52%), Gaps = 45/578 (7%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LI++ + F+ N + S+ G + + ++F+ + K++I+WN + + + G L+ +
Sbjct: 63 LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 122
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLK- 155
+++F MP +++VSWN MI+G + DDAF +F M + TY+ ++S F+
Sbjct: 123 RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLS-FVSS 181
Query: 156 --HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI- 212
G+ A+ + + NV+ +++ + K G VD A + M ++ SW +I
Sbjct: 182 ACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDITSWNSLIW 241
Query: 213 ----TGY--VKNERFCEARELFY---------------RMPDYDK--------------- 236
+GY + +F R + Y + D +K
Sbjct: 242 SCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLS 301
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N V +A I F K LE++ +FE I D V NAMI+ YA +G E AL+LF +
Sbjct: 302 NSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTL 361
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ +++P + TL V +A S L +++G Q H LV+++G E++V V ++++ MY++ G I
Sbjct: 362 RENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLID 421
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F +I + +L+SWNT+I A +G KAL F ++ + G PD IT +L AC
Sbjct: 422 SAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACN 481
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
G V+E + +F M K YG+IP+ EHY C+VD++SR G+L++A I + MP E +W
Sbjct: 482 VGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIW 541
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
GSLL AC I ++ E A+++ EL+PQ+S Y++L+ Y G W + RVR MKE+
Sbjct: 542 GSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVRRAMKEK 601
Query: 537 GVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
GV K SWI I N V F + H I+ L+
Sbjct: 602 GVRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIYFILR 639
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C L+ L+ + H +I+ GF + + N + +YS+ G DS F I NL+SW
Sbjct: 47 CFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISW 106
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
N + AF + G E+A F +M D +++ +++S G +++ F M K
Sbjct: 107 NIFLKAFVRFGELERARDVFDEMP----KRDVVSWNTMISGYVSFGLFDDAFRFFSEMQK 162
Query: 434 VYGIIPSSEHYTCLVDILSRA 454
GI PS Y+ L+ +S A
Sbjct: 163 A-GIRPSGFTYSTLLSFVSSA 182
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 292/545 (53%), Gaps = 22/545 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-P 108
VF++N ++ ++ G + ARQ+FD+M K++++W+A+I+GY Q G Q + +L+ M
Sbjct: 38 VFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFL 97
Query: 109 VKNIVSWNCMIAGCID------NDRIDD---AFDYFQAMPERNTATYNAMISGFLKHGRL 159
V N + +I+ C +I F Y E + N++IS ++K +
Sbjct: 98 VPNEYVFASVISACASLSAVTLGQKIHSRSLKFGY-----ESISFVSNSLISMYMKCNQC 152
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV--- 216
+A +F P N +SY A++ GF++ ++++ M + ++ G +
Sbjct: 153 SDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGIC 212
Query: 217 -KNERFCEARELFYRMP--DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
E EL + + D F+ +IT + ++ +++ A F I+ KD +S+N
Sbjct: 213 TTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWN 272
Query: 274 AMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
+IA + + LR+F M + +++PDD T S AC+ L ++ G+Q H ++R
Sbjct: 273 TLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMR 332
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
++ V NA++ MY++CG I + F ++ NLVSWNTIIA F HG E+A+
Sbjct: 333 TRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVEL 392
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F QM +G PD +TF+ LL+AC HAG V++ F M + YGI P EH++CL+D+L
Sbjct: 393 FEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLG 452
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG+L +A + + PF D V SLL+A ++ +V +GE AK + +L P ++ YV+
Sbjct: 453 RAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVL 512
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
LSNLYA+ GMW V R +K G+ K+ +S IE+ V F GD +H I +I
Sbjct: 513 LSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGI 572
Query: 573 LKRAS 577
LK S
Sbjct: 573 LKTLS 577
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 13/290 (4%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+VF+ ++ + K G AR +F+ + K+ VS++AMI+GY Q G + A+ L+S
Sbjct: 37 DVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYS--- 93
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+M + P++ SV +AC++L + G++ H ++ G+E+ V N++I+MY +C
Sbjct: 94 QMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCS 153
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F PN VS+N +I F ++ E+ L FF M G PD F+ +L C
Sbjct: 154 DALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICT 213
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLV----DILSRAGQLEKAWQITQGMPFEAD 472
+ +L VK+ + S+ ++ L+ + EKA+++ + E D
Sbjct: 214 TTENLKRGAELHCQTVKLN--LDSTPFIGNVIITMYSELNLIQEAEKAFRLIE----EKD 267
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
W +L+AAC + G K M E + S L A AG+
Sbjct: 268 VISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGL 317
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
TL S+ CS + L G H V++ G +++V + N V+ MY++CG + F ++
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
NLVSW+ +I+ + Q G + A+ +SQM L P+ F S++SAC V
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFL---VPNEYVFASVISACASLSAVTLGQ 121
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
+ +K +G S L+ + + Q A + P E + + +L+ V
Sbjct: 122 KIHSRSLK-FGYESISFVSNSLISMYMKCNQCSDALSVFTNTP-EPNCVSYNALITGFVE 179
Query: 486 NLNVELGELAAKKMRE 501
N +E G K MR+
Sbjct: 180 NQQLERGLEFFKLMRQ 195
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+R Q + V NA ++ ++ G I A +F +M ++++WN II G+ +G + +
Sbjct: 330 LMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERA 389
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
LF+ M I V++ ++ C +D YF +M E + ++ +I
Sbjct: 390 VELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLID 449
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ GRL EA + P
Sbjct: 450 MLGRAGRLNEAEEYMRKFP 468
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 292/545 (53%), Gaps = 22/545 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-P 108
VF++N ++ ++ G + ARQ+FD+M K++++W+A+I+GY Q G Q + +L+ M
Sbjct: 38 VFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFL 97
Query: 109 VKNIVSWNCMIAGCID------NDRIDD---AFDYFQAMPERNTATYNAMISGFLKHGRL 159
V N + +I+ C +I F Y E + N++IS ++K +
Sbjct: 98 VPNEYVFASVISACASLSAVTLGQKIHSRSLKFGY-----ESISFVSNSLISMYMKCNQC 152
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV--- 216
+A +F P N +SY A++ GF++ ++++ M + ++ G +
Sbjct: 153 SDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGIC 212
Query: 217 -KNERFCEARELFYRMP--DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
E EL + + D F+ +IT + ++ +++ A F I+ KD +S+N
Sbjct: 213 TTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWN 272
Query: 274 AMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
+IA + + LR+F M + +++PDD T S AC+ L ++ G+Q H ++R
Sbjct: 273 TLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMR 332
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
++ V NA++ MY++CG I + F ++ NLVSWNTIIA F HG E+A+
Sbjct: 333 TRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVEL 392
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F QM +G PD +TF+ LL+AC HAG V++ F M + YGI P EH++CL+D+L
Sbjct: 393 FEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLG 452
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG+L +A + + PF D V SLL+A ++ +V +GE AK + +L P ++ YV+
Sbjct: 453 RAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVL 512
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
LSNLYA+ GMW V R +K G+ K+ +S IE+ V F GD +H I +I
Sbjct: 513 LSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGI 572
Query: 573 LKRAS 577
LK S
Sbjct: 573 LKTLS 577
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 13/290 (4%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+VF+ ++ + K G AR +F+ + K+ VS++AMI+GY Q G + A+ L+S
Sbjct: 37 DVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYS--- 93
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+M + P++ SV +AC++L + G++ H ++ G+E+ V N++I+MY +C
Sbjct: 94 QMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCS 153
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F PN VS+N +I F ++ E+ L FF M G PD F+ +L C
Sbjct: 154 DALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICT 213
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLV----DILSRAGQLEKAWQITQGMPFEAD 472
+ +L VK+ + S+ ++ L+ + EKA+++ + E D
Sbjct: 214 TTENLKRGAELHCQTVKLN--LDSTPFIGNVIITMYSELNLIQEAEKAFRLIE----EKD 267
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
W +L+AAC + G K M E + S L A AG+
Sbjct: 268 VISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGL 317
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
TL S+ CS + L G H V++ G +++V + N V+ MY++CG + F ++
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
NLVSW+ +I+ + Q G + A+ +SQM L P+ F S++SAC V
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFL---VPNEYVFASVISACASLSAVTLGQ 121
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
+ +K +G S L+ + + Q A + P E + + +L+ V
Sbjct: 122 KIHSRSLK-FGYESISFVSNSLISMYMKCNQCSDALSVFTNTP-EPNCVSYNALITGFVE 179
Query: 486 NLNVELGELAAKKMRE 501
N +E G K MR+
Sbjct: 180 NQQLERGLEFFKLMRQ 195
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+R Q + V NA ++ ++ G I A +F +M ++++WN II G+ +G + +
Sbjct: 330 LMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERA 389
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
LF+ M I V++ ++ C +D YF +M E + ++ +I
Sbjct: 390 VELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLID 449
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ GRL EA + P
Sbjct: 450 MLGRAGRLNEAEEYMRKFP 468
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 169/562 (30%), Positives = 298/562 (53%), Gaps = 23/562 (4%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LIR F++N ++ S+ G++ +LFD+M+ +++++W +IITG+ N QE+
Sbjct: 101 LIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEA 160
Query: 101 KNLFQSMPVKNIVS----WNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISG 152
+ F M ++ ++ + ++ C I + + + +
Sbjct: 161 LSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDM 220
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF--------KN 204
+ K G L +A + FE+MP ++ + +T+M+DGF+K G+ KA L+ YM ++
Sbjct: 221 YSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKA--LTAYMKMVTDDVFIDQH 278
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
V+ T+ +K F ++ ++ F+ A+ + K G + +A +F+
Sbjct: 279 VLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQI- 337
Query: 265 QPKDC---VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
DC VS A+I GY + E+AL F + + ++P++ T S+ AC+ L
Sbjct: 338 -HSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLE 396
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G Q H V++ F+ + V + ++ MY +CG S F +I +P+ ++WNT++ F+
Sbjct: 397 HGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFS 456
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
QHG A+ F+ M G P+ +TF++LL C HAG V + ++ F M K+YG++P
Sbjct: 457 QHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKE 516
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
EHY+C++D+L RAG+L++A MPFE + W S L AC I+ ++E + AA K+ +
Sbjct: 517 EHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMK 576
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
L+P+NS +V+LSN+YA W DV +R ++K+ + K YSW++I NK H F D
Sbjct: 577 LEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDW 636
Query: 562 SHPCIDKIHLELKRASVQMKSV 583
SHP +I+ +L Q+K +
Sbjct: 637 SHPQKKEIYEKLDNLLDQIKRI 658
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 2/197 (1%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D T+ + + + LN+G+Q H ++IR G N + N + +YS+CG + + F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
++ N+VSW +II FA + +++AL F QM + G S+L AC G +
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ L+VK G + L D+ S+ G+L A + + MP + D +W S++
Sbjct: 194 FGTQVHCLVVKC-GFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCK-DAVLWTSMIDG 251
Query: 483 CVINLNVELGELAAKKM 499
V N + + A KM
Sbjct: 252 FVKNGDFKKALTAYMKM 268
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 254/435 (58%), Gaps = 7/435 (1%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMS 201
+ ++S + K G E+A RLF++MP R+++S+ +++ G +G + R ++
Sbjct: 178 DRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 237
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARL 259
N V+ +++ E + L + VV ++I + K+G L+ A
Sbjct: 238 QPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 297
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LFE + + VS+N+M+ + NG AE+ + LF+ M + + PD AT+V++ AC+ L
Sbjct: 298 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGL 357
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
+ H + R GF A++ + A++ +Y++ G + SE F +I + ++W ++A
Sbjct: 358 GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAG 417
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+A H +A+ F M G + D +TF LLSAC H+G V E FE+M +VY + P
Sbjct: 418 YAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 477
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HY+C+VD+L R+G+LE A+++ + MP E +GVWG+LL AC + NVELG+ A+++
Sbjct: 478 RLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL 537
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
LDP + Y+MLSN+Y+AAG+WR ++VR LMKE+ +T+ S+IE GNK+H F+ G
Sbjct: 538 LSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVG 597
Query: 560 DMSHPCIDKIHLELK 574
D HP D+IH +L+
Sbjct: 598 DQLHPRSDEIHTKLE 612
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 171/354 (48%), Gaps = 17/354 (4%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ + +S + G A++LFD+M +D+++WN++++G G+L N F M +
Sbjct: 175 FIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTE 234
Query: 111 -----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEE 161
N V+ +++ C +D+ + + + N++I+ + K G L+
Sbjct: 235 SGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDA 294
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN--- 218
A++LFE+MP R+++S+ +M+ G +K L + M + + ++
Sbjct: 295 ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTD 354
Query: 219 ---ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
R E+ + ++ ++ + TA++ + K+G L + +FE I+ +D +++ AM
Sbjct: 355 TGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAM 414
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNG 334
+AGYA + EA++LF M+K ++ D T + +ACS L+ EG++ ++
Sbjct: 415 LAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYR 474
Query: 335 FEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
E + + ++ + R G + D+ EL P+ W ++ A +G+ E
Sbjct: 475 VEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 528
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 141/270 (52%), Gaps = 7/270 (2%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IK 297
F+ +++ + K+G E+A+ LF+ + +D VS+N++++G + G L F M +
Sbjct: 175 FIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTE 234
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
QP++ TL+SV +AC+ + L+EG+ H +V++ G V N++I MY + G +
Sbjct: 235 SGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDA 294
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F ++ +LVSWN+++ +G+ EK + F+ M G +PD T ++LL AC
Sbjct: 295 ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTD 354
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
G + + + G T L+++ ++ G+L + I + + + DT W
Sbjct: 355 TG-LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRDTIAWT 412
Query: 478 SLLAACVINL----NVELGELAAKKMRELD 503
++LA ++ ++L +L K+ E+D
Sbjct: 413 AMLAGYAVHACGREAIKLFDLMVKEGVEVD 442
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 96/176 (54%), Gaps = 6/176 (3%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
+LV ++C+++ + H VI++ ++ + + +++MY + G D++ F ++
Sbjct: 144 SLVFAISSCTSVSYCS---AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 200
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL-NGFDPDGITFLSLLSACGHAGKVNES 424
+ +LVSWN++++ + G+ L F +M +G P+ +T LS++SAC G ++E
Sbjct: 201 PNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG 260
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
L ++VK+ G+ ++ L+++ + G L+ A Q+ + MP + W S++
Sbjct: 261 KSLHGVVVKL-GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSMV 314
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ + A ++ ++ G+++A+ +F+++ +D I W A++ GY + +E+ LF M
Sbjct: 377 IIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVK 436
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLE 160
+ + V++ +++ C + +++ YF+ M E Y+ M+ + GRLE
Sbjct: 437 EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLE 496
Query: 161 EATRLFEQMP 170
+A L + MP
Sbjct: 497 DAYELIKSMP 506
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 155/376 (41%), Positives = 230/376 (61%), Gaps = 4/376 (1%)
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
T ++ Y K A+++F RMP+ +++ TAMIT + K G +E AR LF+R+ +D
Sbjct: 163 TGLVDIYAKGGDVVSAQKVFDRMPE--RSLVSSTAMITCYAKQGNVEAARALFDRMCERD 220
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
VS+N MI GY+Q+G +AL LF ++ +PD+ T+V+ +ACS + L GR H
Sbjct: 221 IVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIH 280
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
V V + NV VC A+I MYS+CG + ++ L F ++V+WN +I +A HG+ +
Sbjct: 281 VFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQ 340
Query: 388 KALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
AL F +M G+ G P ITF+ L AC HAG VNE + +FE M + YGI P EHY C
Sbjct: 341 DALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGC 400
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
LV +L RAGQL++A++I + M EAD+ +W S+L +C ++ LG+ A+ + + N
Sbjct: 401 LVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISN 460
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
S +YV+LSN+YA G + V +VR LMKE+G+ K+ S IEI NKVH F GD H
Sbjct: 461 SGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKS 520
Query: 567 DKIHLELKRASVQMKS 582
+I+ L++ S ++KS
Sbjct: 521 KEIYTMLRKMSERIKS 536
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 177/393 (45%), Gaps = 55/393 (13%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES--- 100
L +Y +N A + GKI + LF Q D+ + A I NG ++
Sbjct: 56 LIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLL 115
Query: 101 -KNLFQSMPVKNIVSWNCMIAGCI--DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
L S N +++ ++ C I F + AT ++ + K G
Sbjct: 116 YVQLLSSQINPNEFTFSSILKSCSTKSGKLIHTHVLKFGLGLDPYVAT--GLVDIYAKGG 173
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
+ A ++F++MP R+++S TAM+ + K+G V+ ARAL D M +++VSW VMI GY +
Sbjct: 174 DVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQ 233
Query: 218 NERFCEARELFYRM-----PDYDK---------------------------------NVF 239
+ +A LF ++ P D+ NV
Sbjct: 234 HGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVK 293
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V TA+I + K G LE A L+F KD V++NAMI GYA +G +++ALRLF M +
Sbjct: 294 VCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGIT 353
Query: 300 -MQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+QP D T + AC+ L+NEG Q + G + + ++++ R G +
Sbjct: 354 GLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQL-- 411
Query: 358 SELAFRQIHSPNL----VSWNTIIAAFAQHGHY 386
+ A+ I + N+ V W++++ + HG +
Sbjct: 412 -KRAYEIIKNMNMEADSVLWSSVLGSCKLHGEF 443
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 175/616 (28%), Positives = 306/616 (49%), Gaps = 86/616 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V + + + G + A ++FD+M+ ++ +TWN+++ Y QNG QE+ +F+ M +
Sbjct: 190 VYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRL 249
Query: 110 KNI----VSWNCMIAGCIDNDR-----------------------------------IDD 130
+ + V+ + C +++ I++
Sbjct: 250 QGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEE 309
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF----EQMPRRNVISYTAML----- 181
A F+ M ++ T+N +++G+ + G +E+A + E+ R + ++ +A+L
Sbjct: 310 AEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAAD 369
Query: 182 ------------------------------DGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
D + K G +D AR + + K++V W M
Sbjct: 370 TRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTM 429
Query: 212 ITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFER-----I 264
+ + EA +LF++M NV ++I GF K G + AR +F +
Sbjct: 430 LAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGV 489
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
P + +++ M++G QNG A+ +F M + ++P+ ++ S + C+++ LL GR
Sbjct: 490 MP-NLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGR 548
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H V+R ++ + +++ MY++CG + ++ F+ + L +N +I+A+A HG
Sbjct: 549 AIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHG 608
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
+AL+ F QM G PD IT S+LSAC H G + E + +F+ MV + PS EHY
Sbjct: 609 QAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHY 668
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
CLV +L+ GQL++A + MP D + GSLL AC N ++EL + AK + +LDP
Sbjct: 669 GCLVKLLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDP 728
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
NS YV LSN+YAA G W V+ +R LMKE+G+ K SWIE+G ++H F+ D SHP
Sbjct: 729 DNSGNYVALSNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFIASDRSHP 788
Query: 565 CIDKIHLELKRASVQM 580
++I++ L +M
Sbjct: 789 KTEEIYVTLDLLGFEM 804
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 208/420 (49%), Gaps = 16/420 (3%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES-----KNLFQ 105
FV + + ++ G A +LF + +V +W AII + + GF +E+ K
Sbjct: 89 FVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQD 148
Query: 106 SMPVKNIVSWNCMIA-GCIDNDRIDDAFDYFQAMP---ERNTATYNAMISGFLKHGRLEE 161
+P N V N + A G + R F + +++ + K G +E+
Sbjct: 149 GLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVED 208
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY----VK 217
A ++F++M RN +++ +M+ + + G +A + M + V V ++G+
Sbjct: 209 AGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACAN 268
Query: 218 NERFCEARE--LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+E E R+ + + + + ++++ + KVG++E A ++F + KD V++N +
Sbjct: 269 SEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLV 328
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
+AGYAQ G+ E+AL + M + ++ D TL ++ + + L G ++H ++N F
Sbjct: 329 VAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDF 388
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E +V V + +I MY++CG + + F + ++V WNT++AA A+ G +AL F Q
Sbjct: 389 EGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQ 448
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M L P+ +++ SL+ G+V E+ ++F M G++P+ +T ++ L + G
Sbjct: 449 MQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCS-SGVMPNLITWTTMMSGLVQNG 507
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 205/413 (49%), Gaps = 29/413 (7%)
Query: 93 QNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER------N 142
++G ++E+ N M N+ + ++ GC+ + A + +R N
Sbjct: 28 KHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFALN 87
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALS 197
+ ++ + K G E ATRLF P NV S+ A++ + G ++A +
Sbjct: 88 DFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQ 147
Query: 198 DYMSFKNVVSWTVM-ITGYVKNERFCEARELFY-RMPDYDKNVFVVTAMITGFCKVGMLE 255
D + N V V+ G +K RF + F + + V+V T+++ + K G +E
Sbjct: 148 DGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVE 207
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV---FT 312
+A +F+ + ++ V++N+M+ YAQNG+ +EA+R+F +M +Q + TLV++ FT
Sbjct: 208 DAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFR---EMRLQGVEVTLVALSGFFT 264
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
AC+ + + EGRQ H L + G E + + ++++ Y + G I ++E+ FR + ++V+
Sbjct: 265 ACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVT 324
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WN ++A +AQ G EKAL M G D +T +LL+ + M V
Sbjct: 325 WNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCV 384
Query: 433 K--VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
K G + S + ++D+ ++ G+++ A ++ + + D +W ++LAAC
Sbjct: 385 KNDFEGDVVVS---SGIIDMYAKCGRMDCARRVFSCVR-KKDIVLWNTMLAAC 433
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
+Q + + + + ++ G + A+ +F +TK++ +NA+I+ Y +G +E+ LF+
Sbjct: 560 SQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQ 619
Query: 107 MPVKNIV----SWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHG 157
M + IV + +++ C + + F+ M + Y ++ G
Sbjct: 620 MEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDG 679
Query: 158 RLEEATRLFEQMP 170
+L+EA R MP
Sbjct: 680 QLDEALRTILTMP 692
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 270/490 (55%), Gaps = 15/490 (3%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N +I Y + G ++ +F M ++N+ SWN M++G + + + A F +MPER+
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARA----- 195
++N M+ G+ + G L EA +++ R N S+ +L +K ++ R
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 196 -LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
++ ++S NVV +I Y K + A+ F M K++ + T +I+G+ K+G +
Sbjct: 206 LVAGFLS--NVVLSCSIIDAYAKCGQMESAKRCFDEMTV--KDIHIWTTLISGYAKLGDM 261
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E A LF + K+ VS+ A+IAGY + G AL LF MI + ++P+ T S A
Sbjct: 262 EAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCAS 321
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLVSW 373
+++ L G++ H +IR N V +++I MYS+ G + SE FR + V W
Sbjct: 322 ASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFW 381
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
NT+I+A AQHG KAL M P+ T + +L+AC H+G V E + FE M
Sbjct: 382 NTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTV 441
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+GI+P EHY CL+D+L RAG ++ + + MPFE D +W ++L C I+ N ELG+
Sbjct: 442 QHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGK 501
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
AA ++ +LDP++SA Y++LS++YA G W V ++R +MK++ V K+ A SWIEI KV
Sbjct: 502 KAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKV 561
Query: 554 HYFLGGDMSH 563
F D SH
Sbjct: 562 EAFTVSDGSH 571
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 189/427 (44%), Gaps = 89/427 (20%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F ++N I + GK A ++FDQM +++ +WN +++GY ++G L ++ +F
Sbjct: 77 FKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVF 136
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN----------------- 147
SMP +++VSWN M+ G + + +A +++ R+ +N
Sbjct: 137 DSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF-RRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 148 ---------AMISGFL--------------KHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+++GFL K G++E A R F++M +++ +T ++ G+
Sbjct: 196 QLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGY 255
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------- 231
K G+++ A L M KN VSWT +I GYV+ A +LF +M
Sbjct: 256 AKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Query: 232 ------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ N V++++I + K G LE + +F K
Sbjct: 316 SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK 375
Query: 268 -DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQ 325
DCV +N MI+ AQ+G+ +ALR+ MIK +QP+ TLV + ACS L+ EG R
Sbjct: 376 HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRW 435
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILD-----SELAFRQIHSPNLVSWNTIIAAF 380
+ +++G + +I + R G + E+ F P+ WN I+
Sbjct: 436 FESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPF----EPDKHIWNAILGVC 491
Query: 381 AQHGHYE 387
HG+ E
Sbjct: 492 RIHGNEE 498
>gi|345505226|gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia maritima]
Length = 570
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 265/473 (56%), Gaps = 8/473 (1%)
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM 149
G+ + G +Q L +++ ++ NC+I I + A F MP+R++ +YN+M
Sbjct: 99 GFAKEG-MQIHGFLTKTVICSDLFLQNCLIGLYIKCSCLGYARQVFDRMPQRDSVSYNSM 157
Query: 150 ISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYMSFKNVV 206
I G++K G +E A LF+ MP+ +N+IS+ +M+ G+ ++ + VD A L M K+++
Sbjct: 158 IDGYVKCGLIESARELFDLMPKEKKNLISWNSMIGGYAQREDGVDIASKLFAEMPEKDLI 217
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
SW +I GYVK+ R +A+ LF MP D V MI G+ K+G + A+ LF+ +
Sbjct: 218 SWNSLIDGYVKHGRIEDAKGLFDVMPRRD--VVTWATMIDGYAKLGFVHKAKSLFDVMPH 275
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQ 325
+D V++N+M+ GY QN EAL +F M K + PD+ TLV V +A + L L++
Sbjct: 276 RDVVAYNSMMGGYVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVD 335
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H+ ++ F + + A+I MYS+CG I + F I + ++ WN +I A HG
Sbjct: 336 IHLYIVEKRFLLDGKLGVALIDMYSKCGSIQQAMAVFEGIENKSIDHWNAMIGGLAVHGL 395
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
E A ++ PD ITF+ +L+AC H+G V E + FELM + + I P +HY
Sbjct: 396 GEAAFDMLMEIEKRFIKPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 455
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP- 504
C+VD+L+R+G +E A + MP E + +W + L AC + E EL + L
Sbjct: 456 CMVDLLARSGSIELAKHLISEMPIEPNDVIWRTFLNACSHHKEFETRELVVAENLILQAG 515
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ MW DV RVR +MKE+ + K SWIE+ KVH FL
Sbjct: 516 YNPSSYVLLSNMYASFEMWEDVRRVRTMMKERKIEKVPGCSWIELDGKVHEFL 568
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 212/410 (51%), Gaps = 45/410 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + + ARQ+FD+M +D +++N++I GY + G ++ ++ LF MP
Sbjct: 120 LFLQNCLIGLYIKCSCLGYARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPK 179
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
KN++SWN MI G D +D A F MPE++ ++N++I G++KHGR+E+A LF
Sbjct: 180 EKKNLISWNSMIGGYAQREDGVDIASKLFAEMPEKDLISWNSLIDGYVKHGRIEDAKGLF 239
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ MPRR+V+++ M+DG+ K G V KA++L D M ++VV++ M+ GYV+N+ EA E
Sbjct: 240 DVMPRRDVVTWATMIDGYAKLGFVHKAKSLFDVMPHRDVVAYNSMMGGYVQNKYHMEALE 299
Query: 227 LFYRM-------PD--------------------YDKNVFVV-----------TAMITGF 248
+FY M PD D ++++V A+I +
Sbjct: 300 VFYDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIVEKRFLLDGKLGVALIDMY 359
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G ++ A +FE I+ K +NAMI G A +G+ E A + + K ++PD T V
Sbjct: 360 SKCGSIQQAMAVFEGIENKSIDHWNAMIGGLAVHGLGEAAFDMLMEIEKRFIKPDYITFV 419
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGI-LDSELAFRQIH 366
V ACS L+ EG L+ R + E + ++ + +R G I L L
Sbjct: 420 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDLLARSGSIELAKHLISEMPI 479
Query: 367 SPNLVSWNTIIAAFAQHGHYE-KALIFFSQMGLN-GFDPDGITFLSLLSA 414
PN V W T + A + H +E + L+ + L G++P LS + A
Sbjct: 480 EPNDVIWRTFLNACSHHKEFETRELVVAENLILQAGYNPSSYVLLSNMYA 529
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 11/211 (5%)
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+NA+I ++ +AL L MI+ ++ D +L V ACS L EG Q H +
Sbjct: 53 WNAVIKSHSHGVDPRQALFLLCSMIENNVPVDKFSLSLVTKACSRLGFAKEGMQIHGFLT 112
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ +++ + N +I +Y +C + + F ++ + VS+N++I + + G E A
Sbjct: 113 KTVICSDLFLQNCLIGLYIKCSCLGYARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARE 172
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE--HYTCLVD 449
F M + L+S G + D ++ K++ +P + + L+D
Sbjct: 173 LFDLMPKEKKN--------LISWNSMIGGYAQREDGVDIASKLFAEMPEKDLISWNSLID 224
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ G++E A + MP D W +++
Sbjct: 225 GYVKHGRIEDAKGLFDVMP-RRDVVTWATMI 254
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 159/474 (33%), Positives = 261/474 (55%), Gaps = 50/474 (10%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
NA++ + + G L A LF++M R+V+S++ M+ ++ L S +++V
Sbjct: 148 NALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYI---------TLFYGFSQRSIV 198
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVF--------------------------- 239
SWT MI GY++ E LF RM ++NVF
Sbjct: 199 SWTAMIAGYIRCNDLEEGERLFVRM--IEENVFPNDITMLSLIISCGFVGAVQLGKRLHA 256
Query: 240 ------------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
+ TA++ + K G + +AR +F+ ++ KD +++ AMI+ YAQ +
Sbjct: 257 YILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDY 316
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
A +LF M ++P++ T+VS+ + C+ L+ G+ H + + G E +V + A+I
Sbjct: 317 AFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALID 376
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY++CG I ++ F + ++ +WN ++A + HG+ EKAL F++M G P+ IT
Sbjct: 377 MYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDIT 436
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
F+ L AC HAG V E LFE M+ +G++P EHY C+VD+L RAG L++A+++ + M
Sbjct: 437 FIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESM 496
Query: 468 PFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVT 527
P + +WG++LAAC I+ N +GELAA+++ L+PQN V++SN+YAAA W DV
Sbjct: 497 PVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVA 556
Query: 528 RVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+R +K+ G+ K+ S IE+ VH F GD +HP I+KI L S ++K
Sbjct: 557 GMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLK 610
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 149/292 (51%), Gaps = 33/292 (11%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN----------------------A 274
+VFVV A++ + + G L +ARLLF+++ +D VS++ A
Sbjct: 143 DVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTA 202
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MIAGY + EE RLF MI+ ++ P+D T++S+ +C + + G++ H ++RNG
Sbjct: 203 MIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNG 262
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F ++++ A++ MY +CG I + F + + ++++W +I+A+AQ + A F
Sbjct: 263 FGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFV 322
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDL---FELMVKVYGIIPSSEHYTCLVDIL 451
QM NG P+ +T +SLLS C VN ++D+ F + G+ T L+D+
Sbjct: 323 QMRDNGVRPNELTMVSLLSLCA----VNGALDMGKWFHAYIDKQGVEVDVILKTALIDMY 378
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
++ G + A ++ + D W ++A ++ GE A K E++
Sbjct: 379 AKCGDISGAQRLFSE-AIDRDICTWNVMMAGYGMH---GYGEKALKLFTEME 426
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 172/402 (42%), Gaps = 98/402 (24%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWN----------------------AI 87
VFV NA + S G + +AR LFD+M+ +DV++W+ A+
Sbjct: 144 VFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAM 203
Query: 88 ITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN 147
I GY + L+E + LF M +N+ P T
Sbjct: 204 IAGYIRCNDLEEGERLFVRMIEENV-------------------------FPNDITMLSL 238
Query: 148 AMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
+ GF+ G ++ RL + R ++ TA++D + K GE+ ARA+ D M K
Sbjct: 239 IISCGFV--GAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNK 296
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPD------------------------------ 233
+V++WT MI+ Y + A +LF +M D
Sbjct: 297 DVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFH 356
Query: 234 --YDK-----NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
DK +V + TA+I + K G + A+ LF +D ++N M+AGY +G E
Sbjct: 357 AYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGE 416
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAV 345
+AL+LF+ M + ++P+D T + ACS L+ EG+ +I + G V +
Sbjct: 417 KALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCM 476
Query: 346 ITMYSRCGGILDSELAFRQIHS----PNLVSWNTIIAAFAQH 383
+ + R G+LD A++ I S PN+ W ++AA H
Sbjct: 477 VDLLGR-AGLLDE--AYKMIESMPVTPNIAIWGAMLAACKIH 515
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
AL ++ M K+D++ D + SV ACS + + G++ H ++NG ++V V NA++
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ--HGHYEKALI-------------- 391
MYS CG ++ + L F ++ ++VSW+T+I A+ +G +++++
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 392 ------FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
F +M P+ IT LSL+ +CG G V L +++ G S T
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILR-NGFGMSLALAT 271
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
LVD+ + G++ A I M D W ++++A
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMISA 307
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 31/264 (11%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDV----ITWN 85
CG S+ + + V A ISA ++A I A QLF QM V +T
Sbjct: 280 CGEI--RSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMV 337
Query: 86 AIITGYWQNGFLQESKNLF-----QSMPVKNIVSWNC--MIAGCIDNDRIDDAFDYFQAM 138
++++ NG L K Q + V I+ M A C D I A F
Sbjct: 338 SLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGD---ISGAQRLFSEA 394
Query: 139 PERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEVDKAR 194
+R+ T+N M++G+ HG E+A +LF +M + N I++ L G V + +
Sbjct: 395 IDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGK 454
Query: 195 AL-----SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
L D+ V + M+ + EA ++ MP N+ + AM+ C
Sbjct: 455 GLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMP-VTPNIAIWGAMLAA-C 512
Query: 250 KVGMLENARLLFER----IQPKDC 269
K+ N L R ++P++C
Sbjct: 513 KIHKNSNMGELAARELLALEPQNC 536
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 181/653 (27%), Positives = 312/653 (47%), Gaps = 114/653 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQM-TTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
FV NA I+ ++ G + +A ++F+ M +DV +WN++I+G QNG ++ +LF+ M
Sbjct: 199 TFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQ 258
Query: 109 VKNI--------------------------------------VSWNCMIAGCIDNDRIDD 130
+ + N ++ R+D
Sbjct: 259 RAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLVMYTKCGRVDS 318
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR------------------- 171
A F+ + E++ ++N+M+S ++++G EA +M R
Sbjct: 319 ALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGH 378
Query: 172 -------RNVISYT-------------AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ V +Y ++D +MK ++ + + D M K+ +SWT +
Sbjct: 379 LGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTI 438
Query: 212 ITGYVKNERFCEARELF------------------------------------YRMPDYD 235
IT Y ++ R EA E+F Y + +
Sbjct: 439 ITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL 498
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
++ V +I + + G + ++ +FE ++ KD V++ +MI YA +G+ EAL LF+ M
Sbjct: 499 LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEM 558
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
D+QPD LVS+ A L L +G++ H +IR F ++ ++++ MYS CG +
Sbjct: 559 QSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSL 618
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F + ++V W +I A HGH ++A+ F +M G PD ++FL+LL AC
Sbjct: 619 SGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYAC 678
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
H+ VNE ++M+ Y + P EHY C+VD+L R+GQ E+A++ + MP + + V
Sbjct: 679 SHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVV 738
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
W SLL AC ++ N EL +AA ++ EL+P N YV++SN++A G W + VR + E
Sbjct: 739 WCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISE 798
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVE 588
+G+ K A SWIEIGN VH F D SH ++I+L+L + +++ + E
Sbjct: 799 RGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTE 851
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 144/283 (50%), Gaps = 42/283 (14%)
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------ 231
T +L + K G V AR L D MS + V SW +I Y+ + CEA ++ M
Sbjct: 99 TKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAAS 158
Query: 232 ---PD-------------------------------YDKNVFVVTAMITGFCKVGMLENA 257
PD D++ FV A+I + K G+L++A
Sbjct: 159 GVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSA 218
Query: 258 RLLFERIQP-KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
+FE + +D S+N+MI+G QNG+ +AL LF GM + + + T V V C+
Sbjct: 219 MRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTE 278
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L LN GR+ H ++++G E N+ CNA++ MY++CG + + FR+I + +SWN++
Sbjct: 279 LAQLNLGRELHAALLKSGSEVNIQ-CNALLVMYTKCGRVDSALRVFREIDEKDYISWNSM 337
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
++ + Q+G Y +A+ F S+M GF PD +SL SA GH G
Sbjct: 338 LSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLG 380
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 181/371 (48%), Gaps = 17/371 (4%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---PVKNIVSWNCM 118
+ G+++ AR LFD M+++ V +WNA+I Y +G E+ ++++M + C
Sbjct: 107 KCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCT 166
Query: 119 IAGCIDNDRIDDAFD--------YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM- 169
+A + ++ + +R+T NA+I+ + K G L+ A R+FE M
Sbjct: 167 LASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMH 226
Query: 170 PRRNVISYTAMLDGFMKKG----EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
R+V S+ +M+ G ++ G +D R + + N + ++ + + R
Sbjct: 227 DGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGR 286
Query: 226 ELFYRMPDYDKNVFV-VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
EL + V + A++ + K G +++A +F I KD +S+N+M++ Y QNG+
Sbjct: 287 ELHAALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGL 346
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EA+ S M++ QPD A +VS+ +A L L G++ H I+ +++ V N
Sbjct: 347 YAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNT 406
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ MY +C I S F ++ + +SW TII +AQ + +AL F + G D
Sbjct: 407 LMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVD 466
Query: 405 GITFLSLLSAC 415
+ S+L AC
Sbjct: 467 PMMIGSILEAC 477
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 143/291 (49%), Gaps = 14/291 (4%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM--- 295
F+ T ++ + K G + +ARLLF+ + + S+NA+I Y +G A EAL ++ M
Sbjct: 96 FLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLS 155
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ PD TL SV A G + H L +++G + + V NA+I MY++C GI
Sbjct: 156 AASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKC-GI 214
Query: 356 LDSEL-AFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
LDS + F +H ++ SWN++I+ Q+G + +AL F M + T + +L
Sbjct: 215 LDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQ 274
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEA 471
C ++N +L ++K S + C L+ + ++ G+++ A ++ + + E
Sbjct: 275 VCTELAQLNLGRELHAALLKS----GSEVNIQCNALLVMYTKCGRVDSALRVFREID-EK 329
Query: 472 DTGVWGSLLAACVIN-LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
D W S+L+ V N L E E ++ +R + A V LS+ G
Sbjct: 330 DYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLG 380
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 299/554 (53%), Gaps = 31/554 (5%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ I A S G I+ ARQ+FD + V WNAII GY +N Q++ ++ M +
Sbjct: 54 FLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLA 113
Query: 111 NI----VSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ ++ ++ C + R A F+ E + N +I+ + K RL
Sbjct: 114 RVSPDSFTFPHLLKACGGLSHLQMGRFVHA-QVFRLGFEADVFVQNGLIALYAKCRRLGC 172
Query: 162 ATRLFE--QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGY 215
A +FE +P R ++S+TA++ + + GE +A + M +V V+ ++ +
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAF 232
Query: 216 VKNERFCEARELFYRM--------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ + R + + PD ++ ++ T + K G + A++LF++++
Sbjct: 233 TCLQDLEQGRSIHASVMKMGLETEPD------LLISLNTMYAKCGQVATAKILFDKMKSP 286
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
+ + +NAMI+GYA+NG A++A+ LF MI D++PD ++ S +AC+ + L + R
Sbjct: 287 NLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMD 346
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
V R+ + +V + +A+I M+++CG + + F + ++V W+ +I + HG
Sbjct: 347 EYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAR 406
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+A+ + M +G P+ +TFL LL AC H+G V E F M + I P +HY C+
Sbjct: 407 EAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQHYACI 465
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
+D+L RAG L++A+++ + MP + VWG+LL+AC + +VELG+ AA+++ +DP N+
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNT 525
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
YV LSNLYAAA +W V VR+ MKE+G+ K SW+E+ ++ F GD SHP +
Sbjct: 526 GHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYE 585
Query: 568 KIHLELKRASVQMK 581
+I +++ ++K
Sbjct: 586 EIERQVEWIESRLK 599
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 94/190 (49%), Gaps = 8/190 (4%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
RQ H ++ G + + + +I S G I + F + P + WN II ++++
Sbjct: 38 RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
H++ AL+ +S+M L PD TF LL ACG G + M F + +V+ + ++
Sbjct: 98 NHFQDALLMYSKMQLARVSPDSFTFPHLLKACG--GLSHLQMGRF-VHAQVFRLGFEADV 154
Query: 444 YT--CLVDILSRAGQLEKAWQITQGMPFEADTGV-WGSLLAACVINLN-VELGELAAKKM 499
+ L+ + ++ +L A + +G+P T V W ++++A N VE E+ + +M
Sbjct: 155 FVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFS-QM 213
Query: 500 RELDPQNSAV 509
R++D + V
Sbjct: 214 RKMDVKPDCV 223
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+++A I ++ G + AR +FD+ +DV+ W+A+I GY +G +E+ +L+++M
Sbjct: 358 VFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMER 417
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEE 161
N V++ ++ C + + + + +F M + Y +I + G L++
Sbjct: 418 DGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQ 477
Query: 162 ATRLFEQMP-RRNVISYTAMLDGFMKKGEVD 191
A + + MP + V + A+L K V+
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 180/536 (33%), Positives = 288/536 (53%), Gaps = 46/536 (8%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D A+I Y G + ++ +F + K++VSW M+A +N +D+ F M
Sbjct: 138 DAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMR 197
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMP--------RRNVISYTAMLDGFMKKGEVD 191
N IS LK EA ++ + + R++ A+L+ + K GE+
Sbjct: 198 IMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIA 257
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------PD----------- 233
+A+ + M +++ W++MI+ Y ++++ EA ELF RM P+
Sbjct: 258 EAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQAC 317
Query: 234 --------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
D NVFV A++ + K G +EN+ LF K+ V++N
Sbjct: 318 ASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWN 377
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+I GY Q G E+AL LFS M+ +D+QP + T SV A ++L L GRQ H L I+
Sbjct: 378 TIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKT 437
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
+ + V N++I MY++CG I D+ L F ++ + VSWN +I ++ HG +AL F
Sbjct: 438 MYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLF 497
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
M + P+ +TF+ +LSAC +AG +++ F+ M++ YGI P EHYTC+V +L R
Sbjct: 498 DMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGR 557
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
+GQ ++A ++ +PF+ VW +LL ACVI+ N++LG++ A+++ E++PQ+ A +V+L
Sbjct: 558 SGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLL 617
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
SN+YA A W +V VR MK++ V K+ SW+E VHYF GD SHP I I
Sbjct: 618 SNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLI 673
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 216/474 (45%), Gaps = 57/474 (12%)
Query: 63 AGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGC 122
AGK S + + D+ N ++ Y GFL+++ LF MP+ N VS+ + G
Sbjct: 21 AGK-SLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGF 79
Query: 123 IDNDRIDDAFDYFQAMPERN--------TATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
+ + A + T ++S L L +++ + +
Sbjct: 80 SRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADA 139
Query: 175 ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE-------RFCEAREL 227
TA++D + G VD AR + D + FK++VSWT M+ Y +N FC+ R +
Sbjct: 140 FVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIM 199
Query: 228 FYRMPD------------------------------YDKNVFVVTAMITGFCKVGMLENA 257
YR + YD++++V A++ + K G + A
Sbjct: 200 GYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEA 259
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ-PDDATLVSVFTACSA 316
+ FE + D + ++ MI+ YAQ+ ++EAL LF M + + P++ T SV AC++
Sbjct: 260 QQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACAS 319
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L LLN G Q H V++ G ++NV V NA++ +Y++CG I +S F N V+WNTI
Sbjct: 320 LVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTI 379
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY- 435
I + Q G EKAL FS M P +T+ S+L A + + L +K
Sbjct: 380 IVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMY 439
Query: 436 ---GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
++ +S L+D+ ++ G+++ A ++T + D W +L+ I+
Sbjct: 440 NKDSVVANS-----LIDMYAKCGRIDDA-RLTFDKMDKQDEVSWNALICGYSIH 487
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 181/372 (48%), Gaps = 39/372 (10%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C +++ + ++V A + +++G+I+ A+Q F++M D+I W+ +I+ Y Q+ +E
Sbjct: 230 CALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKE 289
Query: 100 SKNLF-----QSMPVKNIVSWNCMIAGCID------NDRIDDAFDYFQAMPERNTATYNA 148
+ LF S+ V N ++ ++ C ++I + + N NA
Sbjct: 290 ALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCV--LKVGLDSNVFVSNA 347
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
++ + K G +E + +LF +N +++ ++ G+++ G+ +KA L F N++
Sbjct: 348 LMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNL-----FSNMLGL 402
Query: 209 TVMITGYVKNERFCEARELFYRMPD-----------YDKNVFVVTAMITGFCKVGMLENA 257
+ T + + L P Y+K+ V ++I + K G +++A
Sbjct: 403 DIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDA 462
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
RL F+++ +D VS+NA+I GY+ +G+ EAL LF M + + +P+ T V V +ACS
Sbjct: 463 RLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNA 522
Query: 318 QLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGI-----LDSELAFRQIHSPNLV 371
LL++GR ++++ G E + ++ + R G L E+ F+ P+++
Sbjct: 523 GLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQ----PSVM 578
Query: 372 SWNTIIAAFAQH 383
W ++ A H
Sbjct: 579 VWRALLGACVIH 590
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 54/289 (18%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
N +C++++ VFV+NA + ++ G+I + +LF T K+ + WN II GY
Sbjct: 324 NLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGY 383
Query: 92 WQNGFLQESKNLF----------------------------------QSMPVKNIVSWNC 117
Q G +++ NLF S+ +K + + +
Sbjct: 384 VQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDS 443
Query: 118 MIAGCIDN-----DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM--- 169
++A + + RIDDA F M +++ ++NA+I G+ HG EA LF+ M
Sbjct: 444 VVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQS 503
Query: 170 -PRRNVISYTAMLDGFMKKGEVDKARA-----LSDYMSFKNVVSWTVMITGYVKNERFCE 223
+ N +++ +L G +DK RA L DY + +T M+ ++ +F E
Sbjct: 504 NSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDE 563
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGM-LENARLLFERI---QPKD 268
A +L +P + +V V A++ G C + L+ ++ +R+ +P+D
Sbjct: 564 AVKLIGEIP-FQPSVMVWRALL-GACVIHKNLDLGKVCAQRVLEMEPQD 610
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 287/512 (56%), Gaps = 27/512 (5%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L+ FS+ +FV N+ ++ GK+ ARQ+F+ M + V++WN +I+G++QNG +E+
Sbjct: 211 LVSGFSSN-MFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEA 269
Query: 101 KNLFQSM-------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAM 149
+F SM IVS + C ++ + + + NA+
Sbjct: 270 LAVFNSMMDARVEPDSATIVS---ALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNAL 326
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
+ + + G ++EA+ +F + ++VI++T+M++G++ G A AL M VV
Sbjct: 327 VDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNA 386
Query: 210 VMITGYVKN-ERFC-----EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
V + + C ++ + D +V VVTA+I + K + + +F +
Sbjct: 387 VTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAK 446
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
K V +NA+++G N +A EA+ LF M+ +++ + AT SV A + L L +
Sbjct: 447 TSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQV 506
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN----LVSWNTIIAA 379
H ++R+GF + ++V +I MYS+CG + + F +I PN ++ W+ +IA
Sbjct: 507 MNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEI--PNKEKDIIVWSVLIAG 564
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ HGH E A++ F+QM +G P+ ITF S+L AC H G V++ + LF+ M++ Y P
Sbjct: 565 YGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSP 624
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
HYTC+VD+L RAG+L++A+ + + MPF+ + +WG+LL AC+I+ NVELGE+AA+++
Sbjct: 625 LPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERL 684
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
EL+P+++ Y++L+N+YAA G W+D +L
Sbjct: 685 FELEPESTGNYILLANIYAAVGRWKDAENHKL 716
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 194/411 (47%), Gaps = 56/411 (13%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY 146
I+ G+ L S N F +P VS+ GC+ R F + + + +
Sbjct: 100 ILHGHTITSGLLHSPN-FIHLPSHLAVSY--AFCGCVPLAR-----KLFDDLSDPSLFLW 151
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
NA+I ++ G +A R+F+ M + S D + V KA ++ MS NV
Sbjct: 152 NAIIKMYVDKGFHFDALRVFDSM----ICSGKCWPDKYTFP-LVIKACSV---MSMLNV- 202
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
V+I G R L + + N+FV +++ + G + AR +F +
Sbjct: 203 --GVLIHG----------RAL---VSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLK 247
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+ VS+N MI+G+ QNG EEAL +F+ M+ ++PD AT+VS +C L+ L G +
Sbjct: 248 RSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKV 307
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H LV +N + + V NA++ MYSRCGG+ ++ L F + ++++W ++I + +G+
Sbjct: 308 HKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNA 367
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACG-----------HAGKVNESMDLFELMVKVY 435
+ AL M L+G P+ +T SLLSAC HA + + +D L+V
Sbjct: 368 KSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVV--- 424
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
T L+D+ ++ + ++Q+ + T W +LL+ + N
Sbjct: 425 ---------TALIDMYAKCNAVSYSFQVFAKTSMK-RTVPWNALLSGLIHN 465
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 137/287 (47%), Gaps = 18/287 (6%)
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQ 301
A+ FC G + AR LF+ + +NA+I Y G +ALR+F MI
Sbjct: 124 AVSYAFC--GCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 181
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD T V ACS + +LN G H + +GF +N+ V N+++ MY CG + +
Sbjct: 182 PDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQV 241
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F + ++VSWNT+I+ + Q+G E+AL F+ M +PD T +S L +CGH
Sbjct: 242 FNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGH---- 297
Query: 422 NESMDLFELMVKVYGIIPSS------EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ EL +KV+ ++ + E LVD+ SR G +++A + E D
Sbjct: 298 ---LKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEA-SLVFAETKEKDVIT 353
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
W S++ ++N N + LA +LD + S L A A +
Sbjct: 354 WTSMINGYIMNGNAK-SALALCPAMQLDGVVPNAVTLASLLSACASL 399
>gi|115446683|ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa Japonica Group]
Length = 596
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 268/495 (54%), Gaps = 26/495 (5%)
Query: 104 FQSMPVKNIVSWNCMIAGCI-DNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLE 160
F +P KN S+N ++A + DA MP RN +YN +IS +HGR
Sbjct: 87 FDDLPHKNAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRES 146
Query: 161 EATRLFEQMPR-RNVISYTAMLDGFMKKGEVDKARALSDYMSFK-------------NVV 206
EA R+F Q+ R R + +D F L D + V+
Sbjct: 147 EALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVI 206
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
M+ Y K R +AR +F +M D + T+MI G+C+ ML++A +F+ +
Sbjct: 207 MANAMVDAYSKAGRVEDARGVFDQMTIRDSVSW--TSMIAGYCRASMLDDAVQVFDMMPA 264
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+D +++ A+I+G+ QNG E AL LF M + P LVS AC+ + L+ G++
Sbjct: 265 QDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEV 324
Query: 327 HVLVIRNGFEA---NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
H ++R + NV + NA+I MYS+CG ++ + F ++ +++SWN+++ F+ +
Sbjct: 325 HGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHN 384
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +++L F +M + P +TFL++L+AC HAG V++ + E M + +G+ P +EH
Sbjct: 385 GQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESM-QDHGVEPRAEH 443
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFE---ADTGVWGSLLAACVINLNVELGELAAKKMR 500
Y +D L R QLE+A + +G+ + TG WG+LL AC ++ N+E+ E A+ +
Sbjct: 444 YAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALF 503
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
+L+P+NS YVMLSN+Y+AAG W D +VR LMK +G+ K AYSWIE+ H F+ D
Sbjct: 504 QLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADD 563
Query: 561 MSHPCIDKIHLELKR 575
SH ++I+ L +
Sbjct: 564 TSHHEANEIYEMLDK 578
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 19/264 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + NA + A S+AG++ AR +FDQMT +D ++W ++I GY + L ++ +F MP
Sbjct: 205 VIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPA 264
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-ERNTATYNAMISGF---LKHGRLEEATRL 165
++ ++W +I+G N + A + F+ M E T A++S K G + +
Sbjct: 265 QDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEV 324
Query: 166 FEQMPRR-------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
+ RR NV + A++D + K G++ A A+ D M ++++SW M+TG+ N
Sbjct: 325 HGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHN 384
Query: 219 ERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQ-----PKDCVS 271
+ ++ +F RM + VT A++T G++ + R + E +Q P+
Sbjct: 385 GQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQDHGVEPR-AEH 443
Query: 272 FNAMIAGYAQNGVAEEALRLFSGM 295
+ A I +N EEA G+
Sbjct: 444 YAAFIDALGRNRQLEEASEFIKGL 467
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 150/410 (36%), Positives = 241/410 (58%), Gaps = 3/410 (0%)
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+V TA++D + G++ +AR + D MS ++V +WT MI+ + + AR+LF MP
Sbjct: 44 HVFVQTALVDFYGNAGKIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMP 103
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+N AMI G+ ++ +E+A LLF ++ +D +S+ MIA Y+QN EAL +F
Sbjct: 104 V--RNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVF 161
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ M + PD+ T+ ++ +AC+ L L+ G++ H+ + GF+ +V + +A+I MY++C
Sbjct: 162 NEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKC 221
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + S + F ++ NL WN+II A HG+ E+AL FS+M P+G+TF+S+L
Sbjct: 222 GSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVL 281
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC HAG V E F M + + I P EHY C+VD+L +AG LE A ++ + M E +
Sbjct: 282 GACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPN 341
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
+ +WG+LL C ++ N+++ ++A + + L+P NS Y +L N+YA W +V +R
Sbjct: 342 SVIWGALLGGCKLHRNLKIAQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRAT 401
Query: 533 MKEQGVTKQC-AYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
MKE GV K SWIE+ K+H F D SH D+I+ L Q+K
Sbjct: 402 MKELGVEKTSPGSSWIEMDRKIHQFAASDKSHLASDEIYTLLVELDGQLK 451
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 178/370 (48%), Gaps = 37/370 (10%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
+VFV A + AGKI AR++FD+M+ +DV W +I+ + + G + ++ LF MP
Sbjct: 44 HVFVQTALVDFYGNAGKIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMP 103
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V+N SWN MI G ++ A F MP R+ ++ MI+ + ++ + EA +F +
Sbjct: 104 VRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNE 163
Query: 169 MPRRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
M + ++ ++ G +D + + Y A
Sbjct: 164 MQTNGIDPDEVTMATIISACAHLGALDLGKEIHLY------------------------A 199
Query: 225 RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
E+ +D +V++ +A+I + K G L+ + ++F +++ K+ +N++I G A +G
Sbjct: 200 MEM-----GFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGY 254
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCN 343
AEEAL +FS M + ++P+ T +SV AC+ L+ EGR+ + + R+ +
Sbjct: 255 AEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYG 314
Query: 344 AVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
++ + + G + D+ EL PN V W ++ H + + A + ++ + +
Sbjct: 315 CMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQVAVNESKV--LE 372
Query: 403 PDGITFLSLL 412
P+ + +LL
Sbjct: 373 PNNSGYYTLL 382
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 127/284 (44%), Gaps = 18/284 (6%)
Query: 46 STQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQ 105
S + VF IS +R G +S+ARQLFD+M ++ +WNA+I GY + ++ ++ LF
Sbjct: 72 SERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFS 131
Query: 106 SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEE 161
MP ++I+SW MIA N + +A F M + + T +IS G L+
Sbjct: 132 QMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDL 191
Query: 162 ATRL----FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
+ E +V +A++D + K G +DK+ + + KN+ W +I G
Sbjct: 192 GKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAV 251
Query: 218 NERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ-----PKDCV 270
+ EA +F RM N +++ G++E R F + P +
Sbjct: 252 HGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIE 311
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ M+ + G+ E+AL L M M+P+ ++ C
Sbjct: 312 HYGCMVDLLGKAGLLEDALELVR---SMRMEPNSVIWGALLGGC 352
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%)
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M++ + P T S+ ACS + L G H + + GF+++V V A++ Y G
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
I+++ F ++ ++ +W T+I+ A+ G A F +M
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEM 102
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 273/486 (56%), Gaps = 50/486 (10%)
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNT-----ATYNAMISGFLKHGR- 158
N+ SWN +IA + +A F +M P R+T + +A++ L GR
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLD--LHSGRQ 97
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
+ +F P ++ +A++D + K GE+ AR L D +S +N+VSWT
Sbjct: 98 AHQQALIFGFEP--DLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT--------- 146
Query: 219 ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+MITG+ + A +F+ + +D +S+N++IA
Sbjct: 147 ------------------------SMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAV 182
Query: 279 YAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
YAQNG++ E++ +F M+K ++ + TL +V AC+ G+ H VI+ G E+
Sbjct: 183 YAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLES 242
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
NV V ++I MY +CG + + AF ++ N+ SW+ ++A + HGH ++AL F +M
Sbjct: 243 NVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMN 302
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
+ G P+ ITF+S+L+AC HAG + E F+ M + + P EHY C+VD+L RAG L
Sbjct: 303 MAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYL 362
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
++A+ + +GM D VWG+LL AC ++ NV+LGE++A+K+ ELDP+N YV+LSN+Y
Sbjct: 363 KEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIY 422
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
A AG W DV R+R+LMK G+ K +S ++I +VH FL GD HP +KI+ L++ S
Sbjct: 423 ADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLS 482
Query: 578 VQMKSV 583
++++ V
Sbjct: 483 MKLQEV 488
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 178/406 (43%), Gaps = 45/406 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV++A + S+ G++ AR LFD+++ +++++W ++ITGY QN + +F M
Sbjct: 111 LFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAE 170
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAM-ISGFLKHGRLEEATRL--- 165
++++SWN +IA N ++ + F M + YNA+ +S L + RL
Sbjct: 171 RDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKC 230
Query: 166 -FEQMPR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+Q+ + NV T+++D + K G+V+ AR D M KNV SW+ M+ GY +
Sbjct: 231 IHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGH 290
Query: 221 FCEARELFYR--MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----FN 273
EA E+FY M N +++ G+LE F+ + + V +
Sbjct: 291 AKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYG 350
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
M+ + G +EA L G M ++PD ++ AC + ++ G S R
Sbjct: 351 CMVDLLGRAGYLKEAFDLIKG---MKLRPDFVVWGALLGACRMHKNVDLGEIS----ARK 403
Query: 334 GFEANVSVCNAVI---TMYSRCGGILDSELAFRQIHSPNLVS------------WNTIIA 378
FE + C + +Y+ G D E + + LV + +
Sbjct: 404 LFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLV 463
Query: 379 AFAQHGHYEKALIFFSQMGLN----GFDPDGITFLSLLSACGHAGK 420
+H +EK + ++ + G+ PD S+L GH K
Sbjct: 464 GDREHPQHEKIYEYLEKLSMKLQEVGYVPD---MTSVLHDVGHEEK 506
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+I++ VFV + I + GK+ AR+ FD+M K+V +W+A++ GY +G +E+
Sbjct: 235 VIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEA 294
Query: 101 KNLFQSMPV----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
+F M + N +++ ++A C +++ + +F+AM E Y M+
Sbjct: 295 LEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVD 354
Query: 152 GFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVD 191
+ G L+EA L + M R + + + A+L VD
Sbjct: 355 LLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVD 395
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 292/548 (53%), Gaps = 18/548 (3%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---- 107
V N I + ++SAAR+LFD M +++++W +I+GY QN F E+ +F +M
Sbjct: 258 VINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAG 317
Query: 108 ------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+I++ +C I R A +A E + NA+I + K L E
Sbjct: 318 WQPDGFACTSILN-SCGSLAAIWQGRQIHA-HVIKADLEADEYVKNALIDMYAKCEHLTE 375
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF---KNVVSWTVMITGYVKN 218
A +F+ + + ISY AM++G+ K ++ +A + M F + + V + G +
Sbjct: 376 ARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSS 435
Query: 219 ERFCEARELFYRM---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ E + + + +++ +A+I + K ++ +A+ +F + KD V +N+M
Sbjct: 436 QLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSM 495
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I G+AQN EEA++LF+ ++ M P++ T V++ T S L + G+Q H +I+ G
Sbjct: 496 IFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGV 555
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ + V NA+I MY++CG I + + F +++ WN++I +AQHGH E+AL F
Sbjct: 556 DNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRL 615
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
MG +P+ +TF+ +LSAC HAG V E ++ F M Y I P EHY +V++ R+G
Sbjct: 616 MGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSG 675
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L A + + MP + VW SLL+AC + N E+G AA+ DP +S YV+LSN
Sbjct: 676 KLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSN 735
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+YA+ G+W DV +R M G K+ SWIE+ +VH F+ HP + I+ L
Sbjct: 736 IYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDE 795
Query: 576 ASVQMKSV 583
+ +K++
Sbjct: 796 LTSLIKNL 803
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/547 (22%), Positives = 232/547 (42%), Gaps = 118/547 (21%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF----- 104
+F+ N + S G++ AR LFD+M +++++W ++I+ Y Q+G + +LF
Sbjct: 53 LFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQK 112
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRI-----------------------------------D 129
S V N ++ C + + D
Sbjct: 113 ASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMD 172
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRRNVIS------- 176
+A F A+P R T+N +I+G+ + G A LF++M P R V++
Sbjct: 173 EAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACS 232
Query: 177 --------------------------YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
++D + K + AR L D M ++N+VSWT
Sbjct: 233 ALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTT 292
Query: 211 MITGYVKNERFCEARELFYRM-------------------------------------PD 233
MI+GY++N EA +F+ M D
Sbjct: 293 MISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKAD 352
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ + +V A+I + K L AR +F+ + D +S+NAMI GY++N EA+ +F
Sbjct: 353 LEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQ 412
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M ++P T VS+ S+ + +Q H L+I++G ++ +A+I +YS+C
Sbjct: 413 RMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCS 472
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ D++ F +H ++V WN++I AQ+ E+A+ F+Q+ L+G P+ TF++L++
Sbjct: 473 LVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVT 532
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
+ ++K G+ L+D+ ++ G +++ + + E D
Sbjct: 533 VASTLASMFHGQQFHAWIIKA-GVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGE-DV 590
Query: 474 GVWGSLL 480
W S++
Sbjct: 591 ICWNSMI 597
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 219/475 (46%), Gaps = 63/475 (13%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ N ++ GY G L+++++LF MP +N+VSW +I+ + R D A F A
Sbjct: 52 DLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQ 111
Query: 140 ERNTATYNA-MISGFLKHGRLEEATRLFEQMP--------RRNVISYTAMLDGFMKKGEV 190
+ + N +++ L+ +A L EQ+ NV TA+++ + K G +
Sbjct: 112 KASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCM 171
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----------- 233
D+A + + + V+W +ITGY + A ELF RM PD
Sbjct: 172 DEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSAC 231
Query: 234 --------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ + V+ +I +CK L AR LF+ ++ ++ VS+
Sbjct: 232 SALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWT 291
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
MI+GY QN EA+ +F M + QPD S+ +C +L + +GRQ H VI+
Sbjct: 292 TMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKA 351
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
EA+ V NA+I MY++C + ++ F + + +S+N +I ++++ +A+ F
Sbjct: 352 DLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIF 411
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS----EHY--TCL 447
+M P +TF+SLL V+ S EL +++G+I S + Y + L
Sbjct: 412 QRMRFFSLRPSLLTFVSLLG-------VSSSQLAIELSKQIHGLIIKSGTSLDLYAASAL 464
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
+D+ S+ + A + + ++ D +W S++ N E GE A K +L
Sbjct: 465 IDVYSKCSLVNDAKTVFNMLHYK-DMVIWNSMIFGHAQN---EQGEEAIKLFNQL 515
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 301/561 (53%), Gaps = 40/561 (7%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQES 100
+++ S + +F + +++ R + LF++ K DV +WN++I ++G E+
Sbjct: 1 MKVRSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEA 60
Query: 101 KNLFQSM------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA---------- 144
F SM P ++ S+ C I C FD F A
Sbjct: 61 LLAFSSMRKLSLYPTRS--SFPCAIKAC------SSLFDIFSGKQTHQQAFVFGYQSDIF 112
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL-------- 196
+A+I + G+LE+A ++F+++P+R+++S+T+M+ G+ G A +L
Sbjct: 113 VSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDE 172
Query: 197 --SDYMSFKNVVSWTVMITG--YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
D F + + +I+ V + E+ F +D+ V V ++ + K G
Sbjct: 173 NDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG 232
Query: 253 M--LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA-TLVS 309
+ AR +F++I KD VS+N++++ YAQ+G++ EA +F ++K + +A TL +
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
V A S L G+ H VIR G E +V V ++I MY +CG + + AF ++ + N
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKN 352
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ SW +IA + HGH KAL F M +G P+ ITF+S+L+AC HAG E F
Sbjct: 353 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 412
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
M +G+ P EHY C+VD+L RAG L+KA+ + Q M + D+ +W SLLAAC I+ NV
Sbjct: 413 AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNV 472
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
EL E++ ++ ELD N Y++LS++YA AG W+DV RVR++MK +G+ K +S +E+
Sbjct: 473 ELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLEL 532
Query: 550 GNKVHYFLGGDMSHPCIDKIH 570
+VH FL GD HP +KI+
Sbjct: 533 NGEVHVFLIGDEEHPQREKIY 553
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR+ V V + I + G++ AR+ FD+M K+V +W A+I GY +G ++
Sbjct: 313 VIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKA 372
Query: 101 KNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
LF +M N +++ ++A C + + +F AM R Y M+
Sbjct: 373 LELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVD 432
Query: 152 GFLKHGRLEEATRLFEQM 169
+ G L++A L ++M
Sbjct: 433 LLGRAGFLQKAYDLIQRM 450
>gi|302819822|ref|XP_002991580.1| hypothetical protein SELMODRAFT_478 [Selaginella moellendorffii]
gi|300140613|gb|EFJ07334.1| hypothetical protein SELMODRAFT_478 [Selaginella moellendorffii]
Length = 560
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 252/462 (54%), Gaps = 10/462 (2%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
+SA S G + + F M + ++WNA++ Y Q G L+ +K F MP + VSW
Sbjct: 102 LSAYSDHGDLENTKLTFATMPYRGSVSWNALLGAYAQTGHLESAKEFFDRMPQCDTVSWT 161
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
+ I ++ +F +P+R+ ++N+++S + + +++A R+FE + R NV S
Sbjct: 162 IVSEAYAQRGHIQESRWFFDNVPDRDLVSWNSIMSAYARRALIDDARRVFEGILRPNVFS 221
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+ M+ + + G D+AR + M KNVVSW ++ Y + CEA+E+F RMP K
Sbjct: 222 WNTMIAAYTQNGHFDEARRVFGEMPRKNVVSWNTLLAAYSERGMLCEAKEMFDRMPQ--K 279
Query: 237 NVFVVTAMITGFCKVGML---ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+V +++T + + G + AR +F+ ++ +D +S+N MIA YAQ+G EE + LF
Sbjct: 280 DVISWNSLVTAYAQNGHILRVAAAREIFDTMRERDLISWNTMIAAYAQSGDGEEGIHLFR 339
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS----VCNAVITMY 349
M PD TL++V AC+A + L G+ H IR G +++ V A++ MY
Sbjct: 340 IMDLYGEAPDSITLIAVLDACTAARSLERGKTIHA-AIRAGTRLDLTTHLLVLTALVNMY 398
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
G + + AF+ I ++ +W +I A A++GH AL F + GL G PD + FL
Sbjct: 399 GNLGCVELAMEAFQGIQRRDVTAWTAVIVAHARNGHGGAALELFREFGLEGMQPDAVAFL 458
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
S+L+AC HAG + D F + Y + + EHY C++D+L R GQLE A ++ +GMPF
Sbjct: 459 SILTACSHAGLLYSGRDFFVALHGDYNVGVTLEHYRCVIDMLGRLGQLELAEEVIRGMPF 518
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
+AD W +LL AC + G+ A+ LDP ++ YV
Sbjct: 519 KADFVSWVTLLGACKTQGDAHRGQRVAEAASSLDPGVASPYV 560
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 219/443 (49%), Gaps = 26/443 (5%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
A I A ++AG A ++F+ + + + +++ Y +N L+ SK +F +P ++ V
Sbjct: 6 GAMIKAYTQAGHFVEAVRMFEIVPERSTVAMTSMVVAYAENDALEISKVMFDRIPERDPV 65
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SW +++ N + + + F MP+R+ + M+S + HG LE F MP R
Sbjct: 66 SWTALLSVNATNGHLVEVINIFDRMPKRSWRCWQTMLSAYSDHGDLENTKLTFATMPYRG 125
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
+S+ A+L + + G ++ A+ D M + VSWT++ Y + E+R F +PD
Sbjct: 126 SVSWNALLGAYAQTGHLESAKEFFDRMPQCDTVSWTIVSEAYAQRGHIQESRWFFDNVPD 185
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D + ++++ + + ++++AR +FE I + S+N MIA Y QNG +EA R+F
Sbjct: 186 RD--LVSWNSIMSAYARRALIDDARRVFEGILRPNVFSWNTMIAAYTQNGHFDEARRVFG 243
Query: 294 GMIKMDMQPDDATLVSVFTA----CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
M + ++ + TL++ ++ C A ++ + Q V+ N+++T Y
Sbjct: 244 EMPRKNVVSWN-TLLAAYSERGMLCEAKEMFDRMPQKDVI-----------SWNSLVTAY 291
Query: 350 SRCGGILDSELA---FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
++ G IL A F + +L+SWNT+IAA+AQ G E+ + F M L G PD I
Sbjct: 292 AQNGHILRVAAAREIFDTMRERDLISWNTMIAAYAQSGDGEEGIHLFRIMDLYGEAPDSI 351
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH---YTCLVDILSRAGQLEKAWQI 463
T +++L AC A + E ++ + + H T LV++ G +E A +
Sbjct: 352 TLIAVLDACT-AARSLERGKTIHAAIRAGTRLDLTTHLLVLTALVNMYGNLGCVELAMEA 410
Query: 464 TQGMPFEADTGVWGSLLAACVIN 486
QG+ D W +++ A N
Sbjct: 411 FQGIQ-RRDVTAWTAVIVAHARN 432
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 159/345 (46%), Gaps = 37/345 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF N I+A ++ G AR++F +M K+V++WN ++ Y + G L E+K +F MP
Sbjct: 219 VFSWNTMIAAYTQNGHFDEARRVFGEMPRKNVVSWNTLLAAYSERGMLCEAKEMFDRMPQ 278
Query: 110 KNIVSWNCMIAGCIDND---RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
K+++SWN ++ N R+ A + F M ER+ ++N MI+ + + G EE LF
Sbjct: 279 KDVISWNSLVTAYAQNGHILRVAAAREIFDTMRERDLISWNTMIAAYAQSGDGEEGIHLF 338
Query: 167 EQM----PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
M + I+ A+LD +++ + + + +
Sbjct: 339 RIMDLYGEAPDSITLIAVLDACTAARSLERGKTIHAAIRAGTRL---------------- 382
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
D ++ V+TA++ + +G +E A F+ IQ +D ++ A+I +A+N
Sbjct: 383 ----------DLTTHLLVLTALVNMYGNLGCVELAMEAFQGIQRRDVTAWTAVIVAHARN 432
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G AL LF MQPD +S+ TACS LL GR V + + V++
Sbjct: 433 GHGGAALELFREFGLEGMQPDAVAFLSILTACSHAGLLYSGRDFFV-ALHGDYNVGVTLE 491
Query: 343 N--AVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHG 384
+ VI M R G + +E R + + VSW T++ A G
Sbjct: 492 HYRCVIDMLGRLGQLELAEEVIRGMPFKADFVSWVTLLGACKTQG 536
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
RL T ++ V A ++ G + A + F + +DV W A+I + +NG +
Sbjct: 381 RLDLTTHLLVLTALVNMYGNLGCVELAMEAFQGIQRRDVTAWTAVIVAHARNGHGGAALE 440
Query: 103 LFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAM-PERNTAT----YNAMISGF 153
LF+ ++ + V++ ++ C + D+F A+ + N Y +I
Sbjct: 441 LFREFGLEGMQPDAVAFLSILTACSHAGLLYSGRDFFVALHGDYNVGVTLEHYRCVIDML 500
Query: 154 LKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+ G+LE A + MP + + +S+ +L +G+ + + +++ S
Sbjct: 501 GRLGQLELAEEVIRGMPFKADFVSWVTLLGACKTQGDAHRGQRVAEAAS 549
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/557 (30%), Positives = 300/557 (53%), Gaps = 19/557 (3%)
Query: 41 LIRL-FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
L++L F TQ V NA IS +++ I A +FD+M +D I+WN++I+G NG E
Sbjct: 436 LVKLGFGTQCA-VCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSE 494
Query: 100 SKNLFQSMPVK----NIVSWNCMIAGCIDND-----RIDDAFDYFQAMPERNTATYNAMI 150
+ LF M ++ + + ++ C + R+ + + T+ NA++
Sbjct: 495 AIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGE-TSLANALL 553
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF----KNVV 206
+ ++F M ++NV+S+TAM+ + + G DK L M +V
Sbjct: 554 DMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVF 613
Query: 207 SWTVMITGYVKNERFCEARELF-YRMPD-YDKNVFVVTAMITGFCKVGMLENARLLFERI 264
+ T ++ G+ +E + + + Y + + +K + V A++ + +E ARL+F+ +
Sbjct: 614 AVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHV 673
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
KD +S+N +I GY++N A E+ LFS M+ + +P+ T+ + A +++ L GR
Sbjct: 674 TNKDIISWNTLIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVASISSLERGR 732
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
+ H +R GF + NA++ MY +CG +L + + F ++ NL+SW +IA + HG
Sbjct: 733 EIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHG 792
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
+ A+ F QM +G +PD +F ++L AC H+G E F M K Y I P +HY
Sbjct: 793 CGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHY 852
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP 504
TC+VD+LS G L++A++ + MP E D+ +W SLL C I+ +V+L E A ++ +L+P
Sbjct: 853 TCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEP 912
Query: 505 QNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
+N+ YV+L+N+YA A W V +++ + +G+ + SWIE+ KVH F+ + +HP
Sbjct: 913 ENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHP 972
Query: 565 CIDKIHLELKRASVQMK 581
++I L + +M+
Sbjct: 973 EWNRIAEFLDHVARRMR 989
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/531 (23%), Positives = 212/531 (39%), Gaps = 127/531 (23%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM---- 107
V NA I+ SR G + A Q+FD M +D I+WN+ I+GY+ NG+ + +LF M
Sbjct: 235 VANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEG 294
Query: 108 ------------P---------VKNIVSWNCMIAGCI-DNDRIDDAFD------------ 133
P V +V M +G + D + + D
Sbjct: 295 TEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYV 354
Query: 134 ----------YFQAMPER-NTATYNAMISGFLKHGRLEEATRLFEQM------PRRNVIS 176
F AMP + N +N ++ G+ K EE+ LFEQM P + +S
Sbjct: 355 KCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALS 414
Query: 177 ---------------------------------YTAMLDGFMKKGEVDKARALSDYMSFK 203
A++ + K +D A + D M +
Sbjct: 415 CLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQ 474
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRM----PDYDKNVFV-------------VTAMIT 246
+ +SW +I+G N EA ELF RM + D + V ++
Sbjct: 475 DTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVH 534
Query: 247 GF-CKVGM-----LENARL--------------LFERIQPKDCVSFNAMIAGYAQNGVAE 286
G+ K G+ L NA L +F + K+ VS+ AMI Y + G+ +
Sbjct: 535 GYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFD 594
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
+ L M+ ++PD + SV + + L +G+ H IRNG E + V NA++
Sbjct: 595 KVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALM 654
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MY C + ++ L F + + +++SWNT+I ++++ ++ FS M L F P+ +
Sbjct: 655 EMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTV 713
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
T +L A + ++ ++ G + S LVD+ + G L
Sbjct: 714 TMTCILPAVASISSLERGREIHAYALR-RGFLEDSYTSNALVDMYVKCGAL 763
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 188/387 (48%), Gaps = 34/387 (8%)
Query: 62 RAGKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIV 113
+ G + AR +FD+M + DV W ++++ Y + G QE +LF+ M P + V
Sbjct: 142 KCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAV 201
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQ 168
S C++ CI + + + E+ A NA+I+ + + G +E+A ++F+
Sbjct: 202 S--CVLK-CIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDS 258
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARAL-----SDYMSFKNVVSWTVM---------ITG 214
M R+ IS+ + + G+ G D+A L S+ +V +V+ + G
Sbjct: 259 MHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVG 318
Query: 215 YVKNERFCEARELFYRMPDYDKNV--FVVTAMITGFCKVGMLENARLLFERIQPKDCVS- 271
V + + L + + + + + ++ + K G + +AR +F+ + K V
Sbjct: 319 KVVHG-YSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHV 377
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N ++ GYA+ EE+L LF M ++ + PD+ L + + L +G +H ++
Sbjct: 378 WNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLV 437
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ GF +VCNA+I+ Y++ I ++ L F ++ + +SWN++I+ +G +A+
Sbjct: 438 KLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIE 497
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHA 418
F +M + G + D T LS+L AC +
Sbjct: 498 LFVRMWMQGHELDSTTLLSVLPACARS 524
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 146/320 (45%), Gaps = 29/320 (9%)
Query: 244 MITGFCKVGMLENARLLFERIQPK--DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
++ + K G L AR++F+ + P+ D + ++++ YA+ G +E + LF M +
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD + V ++L + EG H L+ + G +V NA+I +YSRCG + D+
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
F +H+ + +SWN+ I+ + +G +++A+ FS+M G + +T LS+L AC G
Sbjct: 256 FDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELG-- 313
Query: 422 NESMDLFELMVKVY-------GIIPSSEHYTCLVD---------ILSRAGQLEKAWQITQ 465
FEL+ KV G++ E +D + + G + A ++
Sbjct: 314 ------FELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFD 367
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD--PQNSAVYVMLSNLYAAAGMW 523
MP + + VW ++ E L ++M EL P A+ +L + +
Sbjct: 368 AMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCA- 426
Query: 524 RDVTRVRLLMKEQGVTKQCA 543
RD + + G QCA
Sbjct: 427 RDGLVAHGYLVKLGFGTQCA 446
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 163/365 (44%), Gaps = 21/365 (5%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRR--NVISYTAMLDGFMKKGEVDKARALSDYMSFKNV- 205
++ +LK G L A +F++MP R +V +T+++ + K G+ + +L M V
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195
Query: 206 -----VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
VS + + + E + V A+I + + G +E+A +
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ + +D +S+N+ I+GY NG + A+ LFS M + T++SV AC+ L
Sbjct: 256 FDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFE 315
Query: 321 NEGRQSHVLVIRNGFEANV---------SVCNAVITMYSRCGGILDSELAFRQIHSP-NL 370
G+ H +++G ++ ++ + ++ MY +CG + + F + S N+
Sbjct: 316 LVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNV 375
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
WN I+ +A+ +E++L+ F QM G PD LL + +
Sbjct: 376 HVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGY 435
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNV 489
+VK+ G L+ +++ ++ A + MP + DT W S+++ C N LN
Sbjct: 436 LVKL-GFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQ-DTISWNSVISGCTSNGLNS 493
Query: 490 ELGEL 494
E EL
Sbjct: 494 EAIEL 498
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 140/333 (42%), Gaps = 58/333 (17%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT----TKDVITWNAIITGY 91
HS+N + R + + V A I++ +RAG L +M DV +++ G+
Sbjct: 563 HSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGF 622
Query: 92 W----------------QNGF-------------------LQESKNLFQSMPVKNIVSWN 116
+NG ++E++ +F + K+I+SWN
Sbjct: 623 AGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWN 682
Query: 117 CMIAGCIDNDRIDDAFDYFQAMP---ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+I G N+ +++F F M + NT T ++ LE + RR
Sbjct: 683 TLIGGYSRNNFANESFSLFSDMLLQFKPNTVTMTCILPAVASISSLERGREIHAYALRRG 742
Query: 174 VI--SYT--AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
+ SYT A++D ++K G + AR L D ++ KN++SWT+MI GY + +A LF
Sbjct: 743 FLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFE 802
Query: 230 RM--PDYDKNVFVVTAMITGFCKVGMLENARLLFE------RIQPKDCVSFNAMIAGYAQ 281
+M + + +A++ C G+ F +I+PK + ++ +
Sbjct: 803 QMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPK-LKHYTCIVDLLSH 861
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
G +EA F + M ++PD + VS+ C
Sbjct: 862 TGNLKEA---FEFIESMPIEPDSSIWVSLLHGC 891
>gi|125582503|gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 268/495 (54%), Gaps = 26/495 (5%)
Query: 104 FQSMPVKNIVSWNCMIAGCI-DNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLE 160
F +P KN S+N ++A + DA MP RN +YN +IS +HGR
Sbjct: 87 FDDLPHKNAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRES 146
Query: 161 EATRLFEQMPR-RNVISYTAMLDGFMKKGEVDKARALSDYMSFK-------------NVV 206
EA R+F Q+ R R + +D F L D + V+
Sbjct: 147 EALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVI 206
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
M+ Y K R +AR +F +M D + T+MI G+C+ ML++A +F+ +
Sbjct: 207 MANAMVDAYSKAGRVEDARGVFDQMTIRDSVSW--TSMIAGYCRASMLDDAVQVFDMMPA 264
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+D +++ A+I+G+ QNG E AL LF M + P LVS AC+ + L+ G++
Sbjct: 265 QDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEV 324
Query: 327 HVLVIRNGFEA---NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
H ++R + NV + NA+I MYS+CG ++ + F ++ +++SWN+++ F+ +
Sbjct: 325 HGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHN 384
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G +++L F +M + P +TFL++L+AC HAG V++ + E M + +G+ P +EH
Sbjct: 385 GQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESM-QDHGVEPRAEH 443
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFE---ADTGVWGSLLAACVINLNVELGELAAKKMR 500
Y +D L R QLE+A + +G+ + TG WG+LL AC ++ N+E+ E A+ +
Sbjct: 444 YAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALF 503
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
+L+P+NS YVMLSN+Y+AAG W D +VR LMK +G+ K AYSWIE+ H F+ D
Sbjct: 504 QLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADD 563
Query: 561 MSHPCIDKIHLELKR 575
SH ++I+ L +
Sbjct: 564 TSHHEANEIYEMLDK 578
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 19/264 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + NA + A S+AG++ AR +FDQMT +D ++W ++I GY + L ++ +F MP
Sbjct: 205 VIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPA 264
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-ERNTATYNAMISGF---LKHGRLEEATRL 165
++ ++W +I+G N + A + F+ M E T A++S K G + +
Sbjct: 265 QDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEV 324
Query: 166 FEQMPRR-------NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN 218
+ RR NV + A++D + K G++ A A+ D M ++++SW M+TG+ N
Sbjct: 325 HGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHN 384
Query: 219 ERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQ-----PKDCVS 271
+ ++ +F RM + VT A++T G++ + R + E +Q P+
Sbjct: 385 GQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQDHGVEPR-AEH 443
Query: 272 FNAMIAGYAQNGVAEEALRLFSGM 295
+ A I +N EEA G+
Sbjct: 444 YAAFIDALGRNRQLEEASEFIKGL 467
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/552 (30%), Positives = 303/552 (54%), Gaps = 20/552 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A I ++ G+++ A ++F + DV+ W +II+GY Q+G + + F M V
Sbjct: 277 MFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVV 336
Query: 110 KNIVSWN-----CMIAGC--IDNDRIDDAFDYF--QAMPERNTATYNAMISGFLKHGRLE 160
VS + + + C + N ++ + F + + N+++ + K G ++
Sbjct: 337 SEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIK 396
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKG-EVDKARALSDYMSFKNVVSWTVMIT-----G 214
A+ LF +M +++IS++ M+ + G E D ++ + + +W +++
Sbjct: 397 NASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACA 456
Query: 215 YVKN-ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ N E + EL ++ V TA++ + K E A LF R+ KD +++
Sbjct: 457 CISNLEEGMKIHELAVNY-GFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWA 515
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+ +GYA NG+ E++ +F M+ +PD LV + T S L +L + H VI+N
Sbjct: 516 VLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN 575
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
GFE N + ++I +Y++C I D+ F+ + ++V+W++IIAA+ HG E+AL F
Sbjct: 576 GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLF 635
Query: 394 SQMGLNGFD--PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
QM N D P+ +TF+S+LSAC H+G + E +++F++MV Y + P+SEHY +VD+L
Sbjct: 636 YQMA-NHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLL 694
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
R G+L+ A + MP +A +WG+LL AC I+ N+++GE+AAK + LDP ++ Y+
Sbjct: 695 GRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYI 754
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHL 571
+LSN+Y+ W T++R L+KE+ + K S +E+ N+V F+ GD H D I+
Sbjct: 755 LLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYE 814
Query: 572 ELKRASVQMKSV 583
L + +M+ V
Sbjct: 815 ILTKLHAKMREV 826
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 164/356 (46%), Gaps = 23/356 (6%)
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
I A FQ P R +NA++ + G E LF QM + +S D +
Sbjct: 187 IHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVS 246
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
+ L + K +I G++K R D ++FV +A+I
Sbjct: 247 IALKSCAGLRKLLLGK-------VIHGFLKKVRI-------------DGDMFVGSALIDL 286
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDAT 306
+ K G + +A +F D V + ++I+GY Q+G E AL FS M+ + + PD T
Sbjct: 287 YTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVT 346
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
LVSV +AC+ L GR H V R G + + + N+++ +Y + G I ++ FR++
Sbjct: 347 LVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS 406
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+++SW+T++A +A +G L F++M P+ +T +S+L AC + E M
Sbjct: 407 DKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMK 466
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ EL V YG + T L+D+ + EKA + MP + D W L +
Sbjct: 467 IHELAVN-YGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSG 520
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 125/255 (49%), Gaps = 20/255 (7%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM--- 295
F+VT + + + + +A LF+ + +NA++ Y G E L LF M
Sbjct: 172 FIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNV 231
Query: 296 --IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
+ ++ +PD+ ++ +C+ L+ L G+ H + + + ++ V +A+I +Y++CG
Sbjct: 232 SSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCG 291
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLL 412
+ D+ F + P++V W +II+ + Q G E AL FFS+M ++ PD +T +S+
Sbjct: 292 QMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVA 351
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSS--EHYTCLVDIL----SRAGQLEKAWQITQG 466
SAC F+L V+G + ++ CL + L + G ++ A + +
Sbjct: 352 SACAQLSN-------FKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 404
Query: 467 MPFEADTGVWGSLLA 481
M + D W +++A
Sbjct: 405 MS-DKDIISWSTMVA 418
>gi|224071603|ref|XP_002303536.1| predicted protein [Populus trichocarpa]
gi|222840968|gb|EEE78515.1| predicted protein [Populus trichocarpa]
Length = 596
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/416 (37%), Positives = 248/416 (59%), Gaps = 5/416 (1%)
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
F + E+N ++N+++SG LK G L EA R+F+Q+ +++VIS+ +M+ G+ K G++D+A
Sbjct: 182 FDELAEKNVVSWNSILSGHLKSGNLLEAQRVFDQISKKDVISWNSMISGYAKIGDMDRAC 241
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
L M KN SW +I+GYV A F MP+ +N MI G+ K G +
Sbjct: 242 VLFQQMPEKNYSSWNALISGYVNCGDIKSAWRFFDAMPE--RNSVSWITMIAGYSKCGDV 299
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM--DMQPDDATLVSVFT 312
++A LF++I KD ++FNAMI+ +AQN +AL LFS M+K ++QPD TL SV +
Sbjct: 300 DSASKLFDQIAKKDLLTFNAMISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLASVVS 359
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
ACS L L V G E + + A++ +Y++CG + + F ++ ++V+
Sbjct: 360 ACSQLGDLRFASWIESYVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKKDVVA 419
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
++ +I+ +G A+ F M P+ TF LL+AC HAG V E F M
Sbjct: 420 YSAMISGCGINGKVADAIKLFDMMVDAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSM- 478
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
K +G++PS++HY +VD+L RAG+L+ A+++ + MP + +GVWG+LL AC ++ NVELG
Sbjct: 479 KDHGLVPSTDHYAIMVDLLGRAGRLQDAYELIKSMPMQPHSGVWGALLLACNVHNNVELG 538
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
E+AA+ L+ +A Y +L+N+Y++AG W DV R+R L KE+ + K SW E
Sbjct: 539 EIAAQHCFNLETNATAYYSLLANIYSSAGRWDDVGRLRKLWKEKKLAKLSGCSWTE 594
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 195/378 (51%), Gaps = 40/378 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V A + S+ G ++ A+++FD++ K+V++WN+I++G+ ++G L E++ +F +
Sbjct: 159 VYVQTALVDLYSKLGDMNTAQKVFDELAEKNVVSWNSILSGHLKSGNLLEAQRVFDQISK 218
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K+++SWN MI+G +D A FQ MPE+N +++NA+ISG++ G ++ A R F+ M
Sbjct: 219 KDVISWNSMISGYAKIGDMDRACVLFQQMPEKNYSSWNALISGYVNCGDIKSAWRFFDAM 278
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
P RN +S+ M+ G+ K G+VD A L D ++ K+++++ MI+ + +N + +A LF
Sbjct: 279 PERNSVSWITMIAGYSKCGDVDSASKLFDQIAKKDLLTFNAMISCFAQNSQPRKALWLFS 338
Query: 230 RMPDYDKNV---------------------------------------FVVTAMITGFCK 250
M N+ +VTA++ + K
Sbjct: 339 EMLKAYANIQPDQMTLASVVSACSQLGDLRFASWIESYVNDLGTEIDDQLVTALLDLYAK 398
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G ++ A LF + KD V+++AMI+G NG +A++LF M+ + P+ AT +
Sbjct: 399 CGSVDKAYELFHGLNKKDVVAYSAMISGCGINGKVADAIKLFDMMVDAQIHPNLATFTGL 458
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPN 369
TAC+ L+ EG + + +G + ++ + R G + D+ EL P+
Sbjct: 459 LTACNHAGLVKEGYRFFSSMKDHGLVPSTDHYAIMVDLLGRAGRLQDAYELIKSMPMQPH 518
Query: 370 LVSWNTIIAAFAQHGHYE 387
W ++ A H + E
Sbjct: 519 SGVWGALLLACNVHNNVE 536
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+L+ P D S+ I ++Q G +EAL L+ M + + P + S A +
Sbjct: 80 ILYHLPHP-DSFSWGWAIRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRAYARTT 138
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
G H + GF V V A++ +YS+ G + ++ F ++ N+VSWN+I++
Sbjct: 139 YKMGGMSIHAESYKYGFSNCVYVQTALVDLYSKLGDMNTAQKVFDELAEKNVVSWNSILS 198
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+ G+ +A F Q+ D I++ S++S G ++ + LF+ M +
Sbjct: 199 GHLKSGNLLEAQRVFDQIS----KKDVISWNSMISGYAKIGDMDRACVLFQQMPE----- 249
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + L+ G ++ AW+ MP E ++ W +++A
Sbjct: 250 KNYSSWNALISGYVNCGDIKSAWRFFDAMP-ERNSVSWITMIAG 292
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 8/202 (3%)
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
A ++++ G+ + +Q A L ++ + N+ +Q+H +I NGF +
Sbjct: 3 TASYSIQVLFGLFDLAIQMLAAKLTTIL---NNYLTANQAKQTHACIIINGFNNLEPLLV 59
Query: 344 AVITMYSRCGGILDSELA---FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
I + +R S+ + P+ SW I F+Q G +++AL + QM G
Sbjct: 60 RQILLSARNNPRRISQYVHSILYHLPHPDSFSWGWAIRYFSQQGQFKEALYLYVQMQRQG 119
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
P S L A M + K YG T LVD+ S+ G + A
Sbjct: 120 LCPSTFAVSSALRAYARTTYKMGGMSIHAESYK-YGFSNCVYVQTALVDLYSKLGDMNTA 178
Query: 461 WQITQGMPFEADTGVWGSLLAA 482
++ + E + W S+L+
Sbjct: 179 QKVFDELA-EKNVVSWNSILSG 199
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/560 (30%), Positives = 293/560 (52%), Gaps = 27/560 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V+N+ ++ S+AG + AA + F D+I+WN +I+ Y QN E+ F+ +
Sbjct: 929 VPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE-----------RNTATYNAMISGFLKHGR 158
+ +A + D +YF + ++ A+I + K G+
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN---------VVSWT 209
++EA L ++ S+ A++ G++K +K+R ++ S + ++
Sbjct: 1049 MDEAEFLLHGKYDFDLASWNAIMFGYIKS---NKSRKALEHFSLMHEMGIPIDEITLATA 1105
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
+ +G + N + + + + ++ +++V + ++ + K G + NA LF I D
Sbjct: 1106 IKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDE 1165
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V++ MI+GY +NG + AL ++ M +QPD+ T ++ A S L L +G+Q H
Sbjct: 1166 VAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHAN 1225
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
V++ + + V +++ MY +CG + D+ FR++ +V WN ++ AQHGH ++A
Sbjct: 1226 VVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEA 1285
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F M NG PD +TF+ +LSAC H+G +E+ F+ M K YGI P EHY+CLVD
Sbjct: 1286 LNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVD 1345
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
L RAG++++A + MPF+A ++ +LL AC + E + A K+ LDP +S+
Sbjct: 1346 ALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSA 1405
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP----C 565
YV+LSN+YAA+ W DVT R +MK + V K +SWI++ NKVH F+ D SHP
Sbjct: 1406 YVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLI 1465
Query: 566 IDKIHLELKRASVQMKSVDD 585
+KI +KR + V D
Sbjct: 1466 YEKIEDLMKRIREEGSYVPD 1485
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 212/456 (46%), Gaps = 57/456 (12%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
++ N I+ S+ G + +ARQ+FD+ + +D++TWN+I+ Y Q F +
Sbjct: 647 YLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ----------FADSSYE 696
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK-----HGRLEEATRL 165
N++ + G + F + ++SGF++ HG A ++
Sbjct: 697 NVLE-GFRLFGLLRE------FGFSITRLTLAPLLKLCLLSGFVQVSETVHGY---AVKI 746
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
++ ++ A+++ + K G V +AR L D M ++ V W VM+ YV+N EA
Sbjct: 747 GFEL---DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803
Query: 226 ELF---YR---MPDYDKNVFVVTAMITGFCKVGMLENARL-------LFERIQPKDCVSF 272
F +R PD+ N+ V + +A +F Q + ++
Sbjct: 804 RFFSAFHRSGFXPDF-SNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAW 862
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N + + G A+ F +++ + D TLV + +A L+ G Q H LVI+
Sbjct: 863 NKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIK 922
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP--NLVSWNTIIAAFAQHGHYEKAL 390
+ F V V N+++ MYS+ G + +E F I+SP +L+SWNT+I+++AQ+ +A+
Sbjct: 923 SSFAPVVPVSNSLMNMYSKAGVVYAAEKTF--INSPELDLISWNTMISSYAQNNLEMEAI 980
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY------GIIPSSEHY 444
F + +G PD T S+L AC + + F L +V+ GII S
Sbjct: 981 CTFRDLLRDGLKPDQFTLASVLRAC----STGDEGEYFTLGSQVHVYAIKCGIINDSFVS 1036
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
T L+D+ S+ G++++A + G ++ D W +++
Sbjct: 1037 TALIDLYSKGGKMDEAEFLLHG-KYDFDLASWNAIM 1071
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/513 (23%), Positives = 214/513 (41%), Gaps = 98/513 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+FV+ A ++ + G + AR LFD+M +D + WN ++ Y +N F E+ F +
Sbjct: 752 LFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHR 811
Query: 109 ---VKNIVSWNCMIAGC---IDNDRIDD-------AFDYFQAMPERNTATYNAMISGFLK 155
+ + +C+I G + N+R A F N +N ++ FL
Sbjct: 812 SGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLH 871
Query: 156 HGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVD---KARALSDYMSFKNVV-- 206
G++ A F+ + R + ++ +L + ++D + AL SF VV
Sbjct: 872 AGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPV 931
Query: 207 ------------------------------SWTVMITGYVKN----ERFCEARELFYRMP 232
SW MI+ Y +N E C R+L
Sbjct: 932 SNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGL 991
Query: 233 DYDK------------------------------------NVFVVTAMITGFCKVGMLEN 256
D+ + FV TA+I + K G ++
Sbjct: 992 KPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDE 1051
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A L D S+NA++ GY ++ + +AL FS M +M + D+ TL + A
Sbjct: 1052 AEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGC 1111
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L +G+Q I+ GF ++ V + V+ MY +CG + ++ F +I P+ V+W T+
Sbjct: 1112 LINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTM 1171
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I+ + ++G + AL + M ++G PD TF +L+ A + + + +VK
Sbjct: 1172 ISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVK--- 1228
Query: 437 IIPSSEHY--TCLVDILSRAGQLEKAWQITQGM 467
+ S +H+ T LVD+ + G ++ A+++ + M
Sbjct: 1229 LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 161/357 (45%), Gaps = 17/357 (4%)
Query: 20 ILRILSTPDSCGNFTPHSSNCL--IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT 77
+LR ST D FT S + I+ FV+ A I S+ GK+ A L
Sbjct: 1001 VLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY 1060
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSM-----PVKNIVSWNCMIA-GCIDNDRIDDA 131
D+ +WNAI+ GY ++ +++ F M P+ I + A GC+ N +
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ 1120
Query: 132 FDYFQAMPERNTATY--NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
+ N + + ++ ++K G + A LF ++ R + +++T M+ G+++ G+
Sbjct: 1121 IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGD 1180
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------DYDKNVFVVTA 243
D A ++ M V +K A E ++ DY + FV T+
Sbjct: 1181 EDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTS 1240
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
++ +CK G +++A +F ++ + V +NAM+ G AQ+G +EAL LF M +QPD
Sbjct: 1241 LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPD 1300
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSE 359
T + V +ACS L +E + + + G + + ++ R G I ++E
Sbjct: 1301 KVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAE 1357
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
A+ L G+++H ++ +G + + N +ITMYS+CG + + F + +LV+WN+
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 376 IIAAFAQ--HGHYEKALIFFSQMGL---NGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
I+AA+AQ YE L F GL GF +T LL C +G V S +
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
VK+ G LV+I + G + +A + MP E D +W +L A V N
Sbjct: 743 AVKI-GFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKAYVEN 796
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 123/290 (42%), Gaps = 36/290 (12%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+L ++V++ + + G + A +LF +++ D + W +I+GY +NG +
Sbjct: 1126 IKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHAL 1185
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDND-----------------RIDDAFDYFQAMPERNTA 144
+++ M V + A I ++D + D+F
Sbjct: 1186 SVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVG------- 1238
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
+++ + K G +++A R+F +M R V+ + AML G + G VD+A L M
Sbjct: 1239 --TSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNG 1296
Query: 205 V----VSWTVMITGYVKNERFCEARELF---YRMPDYDKNVFVVTAMITGFCKVGMLENA 257
+ V++ +++ + F EA + F ++ + + ++ + G ++ A
Sbjct: 1297 IQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEA 1356
Query: 258 RLLFERIQPKDCVS-FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ + K S + A++ G AE A R+ ++ +D P D++
Sbjct: 1357 ENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALD--PSDSS 1404
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/560 (30%), Positives = 293/560 (52%), Gaps = 27/560 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V+N+ ++ S+AG + AA + F D+I+WN +I+ Y QN E+ F+ +
Sbjct: 929 VPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE-----------RNTATYNAMISGFLKHGR 158
+ +A + D +YF + ++ A+I + K G+
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN---------VVSWT 209
++EA L ++ S+ A++ G++K +K+R ++ S + ++
Sbjct: 1049 MDEAEFLLHGKYDFDLASWNAIMFGYIKS---NKSRKALEHFSLMHEMGIPIDEITLATA 1105
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
+ +G + N + + + + ++ +++V + ++ + K G + NA LF I D
Sbjct: 1106 IKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDE 1165
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V++ MI+GY +NG + AL ++ M +QPD+ T ++ A S L L +G+Q H
Sbjct: 1166 VAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHAN 1225
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
V++ + + V +++ MY +CG + D+ FR++ +V WN ++ AQHGH ++A
Sbjct: 1226 VVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEA 1285
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F M NG PD +TF+ +LSAC H+G +E+ F+ M K YGI P EHY+CLVD
Sbjct: 1286 LNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVD 1345
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
L RAG++++A + MPF+A ++ +LL AC + E + A K+ LDP +S+
Sbjct: 1346 ALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSA 1405
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP----C 565
YV+LSN+YAA+ W DVT R +MK + V K +SWI++ NKVH F+ D SHP
Sbjct: 1406 YVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLI 1465
Query: 566 IDKIHLELKRASVQMKSVDD 585
+KI +KR + V D
Sbjct: 1466 YEKIEDLMKRIREEGSYVPD 1485
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 211/454 (46%), Gaps = 53/454 (11%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
++ N I+ S+ G + +ARQ+FD+ + +D++TWN+I+ Y Q F +
Sbjct: 647 YLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ----------FADSSYE 696
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLK-----HGRLEEATRL 165
N++ + G + F + ++SGF++ HG A ++
Sbjct: 697 NVLE-GFRLFGLLRE------FGFSITRLTLAPLLKLCLLSGFVQVSETVHGY---AVKI 746
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
++ ++ A+++ + K G V +AR L D M ++ V W VM+ YV+N EA
Sbjct: 747 GFEL---DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803
Query: 226 ELF---YR---MPDYDKNVFVVTAMITGFCKVGMLENARL-------LFERIQPKDCVSF 272
F +R PD+ N+ V + +A +F Q + ++
Sbjct: 804 RFFSAFHRSGFFPDF-SNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAW 862
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N + + G A+ F +++ + D TLV + +A L+ G Q H LVI+
Sbjct: 863 NKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIK 922
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP--NLVSWNTIIAAFAQHGHYEKAL 390
+ F V V N+++ MYS+ G + +E F I+SP +L+SWNT+I+++AQ+ +A+
Sbjct: 923 SSFAPVVPVSNSLMNMYSKAGVVYAAEKTF--INSPELDLISWNTMISSYAQNNLEMEAI 980
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY----GIIPSSEHYTC 446
F + +G PD T S+L AC G E L V VY GII S T
Sbjct: 981 CTFRDLLRDGLKPDQFTLASVLRACS-TGDEGEYFTLGS-QVHVYAIKCGIINDSFVSTA 1038
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
L+D+ S+ G++++A + G ++ D W +++
Sbjct: 1039 LIDLYSKGGKMDEAEFLLHG-KYDFDLASWNAIM 1071
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/513 (23%), Positives = 214/513 (41%), Gaps = 98/513 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+FV+ A ++ + G + AR LFD+M +D + WN ++ Y +N F E+ F +
Sbjct: 752 LFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHR 811
Query: 109 ---VKNIVSWNCMIAGC---IDNDRIDD-------AFDYFQAMPERNTATYNAMISGFLK 155
+ + +C+I G + N+R A F N +N ++ FL
Sbjct: 812 SGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLH 871
Query: 156 HGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVD---KARALSDYMSFKNVV-- 206
G++ A F+ + R + ++ +L + ++D + AL SF VV
Sbjct: 872 AGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPV 931
Query: 207 ------------------------------SWTVMITGYVKN----ERFCEARELFYRMP 232
SW MI+ Y +N E C R+L
Sbjct: 932 SNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGL 991
Query: 233 DYDK------------------------------------NVFVVTAMITGFCKVGMLEN 256
D+ + FV TA+I + K G ++
Sbjct: 992 KPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDE 1051
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
A L D S+NA++ GY ++ + +AL FS M +M + D+ TL + A
Sbjct: 1052 AEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGC 1111
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L L +G+Q I+ GF ++ V + V+ MY +CG + ++ F +I P+ V+W T+
Sbjct: 1112 LINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTM 1171
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I+ + ++G + AL + M ++G PD TF +L+ A + + + +VK
Sbjct: 1172 ISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVK--- 1228
Query: 437 IIPSSEHY--TCLVDILSRAGQLEKAWQITQGM 467
+ S +H+ T LVD+ + G ++ A+++ + M
Sbjct: 1229 LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 161/357 (45%), Gaps = 17/357 (4%)
Query: 20 ILRILSTPDSCGNFTPHSSNCL--IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMT 77
+LR ST D FT S + I+ FV+ A I S+ GK+ A L
Sbjct: 1001 VLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY 1060
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSM-----PVKNIVSWNCMIA-GCIDNDRIDDA 131
D+ +WNAI+ GY ++ +++ F M P+ I + A GC+ N +
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ 1120
Query: 132 FDYFQAMPERNTATY--NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
+ N + + ++ ++K G + A LF ++ R + +++T M+ G+++ G+
Sbjct: 1121 IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGD 1180
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------DYDKNVFVVTA 243
D A ++ M V +K A E ++ DY + FV T+
Sbjct: 1181 EDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTS 1240
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
++ +CK G +++A +F ++ + V +NAM+ G AQ+G +EAL LF M +QPD
Sbjct: 1241 LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPD 1300
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSE 359
T + V +ACS L +E + + + G + + ++ R G I ++E
Sbjct: 1301 KVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAE 1357
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
A+ L G+++H ++ +G + + N +ITMYS+CG + + F + +LV+WN+
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 376 IIAAFAQ--HGHYEKALIFFSQMGL---NGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
I+AA+AQ YE L F GL GF +T LL C +G V S +
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
VK+ G LV+I + G + +A + MP E D +W +L A V N
Sbjct: 743 AVKI-GFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKAYVEN 796
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 123/290 (42%), Gaps = 36/290 (12%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+L ++V++ + + G + A +LF +++ D + W +I+GY +NG +
Sbjct: 1126 IKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHAL 1185
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDND-----------------RIDDAFDYFQAMPERNTA 144
+++ M V + A I ++D + D+F
Sbjct: 1186 SVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVG------- 1238
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
+++ + K G +++A R+F +M R V+ + AML G + G VD+A L M
Sbjct: 1239 --TSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNG 1296
Query: 205 V----VSWTVMITGYVKNERFCEARELF---YRMPDYDKNVFVVTAMITGFCKVGMLENA 257
+ V++ +++ + F EA + F ++ + + ++ + G ++ A
Sbjct: 1297 IQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEA 1356
Query: 258 RLLFERIQPKDCVS-FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ + K S + A++ G AE A R+ ++ +D P D++
Sbjct: 1357 ENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALD--PSDSS 1404
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 205/647 (31%), Positives = 317/647 (48%), Gaps = 116/647 (17%)
Query: 29 SCG---NFTPHSS--NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTK---D 80
+CG NF +S C+IRL VFV NA IS + + AR++FD++ + D
Sbjct: 135 ACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICD 194
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVK-----------NIVSWNCMIAG-------- 121
+TWN+I++ Y + +LF+ M V NI+ C G
Sbjct: 195 SVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPV-CGYLGLGLCGRQV 253
Query: 122 ---CIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYT 178
C+ + ++D F NA++ + K G++E+A ++FE+M ++V+++
Sbjct: 254 HGFCVRSGLVEDVF------------VGNALVDMYAKCGKMEDANKVFERMRFKDVVTWN 301
Query: 179 AMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNERFCEARELFYRM--- 231
AM+ G+ + G + A +L M + +VV+W+ +I+GY + CEA ++F +M
Sbjct: 302 AMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGC 361
Query: 232 -----------------------------------------PDYDKNVFVVTAMITGFCK 250
D ++ V+ A+I + K
Sbjct: 362 RCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAK 421
Query: 251 VGMLENARLLFERIQPKD--CVSFNAMIAGYAQNGVAEEALRLFSGMIKMD--MQPDDAT 306
LE AR +F+ I PKD V++ MI GYAQ+G A AL+LFS M K+D + P+D T
Sbjct: 422 CKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFT 481
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNG-FEANVS-VCNAVITMYSRCGGILDSELAFRQ 364
+ V AC+ L L G+Q H V+R +++V V N +I MYS+ G + +++ F
Sbjct: 482 ISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDS 541
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ N VSW +++ + HG E A F +M DGITFL +L AC H+G
Sbjct: 542 MSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSG----- 596
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
MD +G+ P EHY C+VD+L RAG+L +A ++ MP E VW +LL+AC
Sbjct: 597 MD--------FGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACR 648
Query: 485 INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAY 544
I+ N EL E AAKK+ EL N Y +LSN+YA A W+DV R+ LMK G+ K +
Sbjct: 649 IHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGW 708
Query: 545 SWIEIGNKVHYFLGGDMSHPCIDKIHLELK------RASVQMKSVDD 585
SW++ + F GD +H KI+ L +A+ + VDD
Sbjct: 709 SWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKANFSLHDVDD 755
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 13/278 (4%)
Query: 241 VTAMITGFCKVGMLENARLLFER-IQPKDCVSF--NAMIAGYAQNGVAEEALRLFSGMIK 297
VT +I + + NA LL E+ + P + N +I ALRLF M
Sbjct: 60 VTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKT 119
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+ PD T VF AC + G H VIR GFE+NV VCNAVI+MY +C ++
Sbjct: 120 LHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVH 179
Query: 358 S-----ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSL 411
+ EL +R I + V+WN+I++ ++ A+ F +M + G PD + +++
Sbjct: 180 ARKVFDELCYRGI--CDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNI 237
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
L CG+ G + V+ G++ LVD+ ++ G++E A ++ + M F+
Sbjct: 238 LPVCGYLGLGLCGRQVHGFCVRS-GLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFK- 295
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
D W +++ N E KMRE ++ V
Sbjct: 296 DVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVV 333
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 254/451 (56%), Gaps = 35/451 (7%)
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV------ISYTAMLDGFMKKGEVD 191
MPER+ +N++ISG+ G L + + +M R V +++ +M+ + G +
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
+ V I G V E V VV A++ + K
Sbjct: 61 EG----------------VCIHGLVMKSGVLE-------------EVKVVNALMNLYGKT 91
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G L ++ LFE + K+ VS+N MI + QNG+AEE L F+ + ++PD AT ++V
Sbjct: 92 GDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVL 151
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
C + ++ + H L++ GF AN + A++ +Y++ G + DS F +I SP+ +
Sbjct: 152 RVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSM 211
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+W ++AA+A HG+ A+ F M G PD +TF LL+AC H+G V E FE M
Sbjct: 212 AWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETM 271
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
K Y I P +HY+C+VD++ R+G L+ A+ + + MP E +GVWG+LL AC + + +L
Sbjct: 272 SKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQL 331
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
G AAK++ EL+P++ Y+MLSN+Y+A+G+W+D +R+R LMK++G+ + YS+IE GN
Sbjct: 332 GTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGN 391
Query: 552 KVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
K+H F+ GD SHP +KI +LK +MKS
Sbjct: 392 KIHKFVVGDWSHPESEKIQKKLKEIRKKMKS 422
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 146/322 (45%), Gaps = 18/322 (5%)
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK------NIVSWNCMIAGCIDNDRID 129
M +D++ WN++I+GY G+L + + M N V++ MI+ C+ +
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 130 DAFDYFQAMPE----RNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
+ + + NA+++ + K G L + +LFE + +N++S+ M+ +
Sbjct: 61 EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHL 120
Query: 186 KKGEVDKARA---LSDYMSFKNVVSWTVMITGYVKN---ERFCEARELFYRMPDYDKNVF 239
+ G ++ A +S ++ K + + + ++ R + ++ N
Sbjct: 121 QNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTC 180
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
+ TA++ + K+G LE++ +F I D +++ AM+A YA +G +A++ F M+
Sbjct: 181 ITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYG 240
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ PD T + ACS L+ EGR + R E + + ++ + R G + D+
Sbjct: 241 LSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDA 300
Query: 359 ELAFRQI-HSPNLVSWNTIIAA 379
+++ P+ W ++ A
Sbjct: 301 YGLIKEMPMEPSSGVWGALLGA 322
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 116/254 (45%), Gaps = 24/254 (9%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
++V NA++ Y + G L S LF+ + VKN+VSWN MI + N ++ YF
Sbjct: 76 EEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMS 135
Query: 139 P----ERNTATYNAMIS-----GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
+ + AT+ A++ G ++ + +F I+ TA+LD + K G
Sbjct: 136 RWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCIT-TALLDLYAKLGR 194
Query: 190 VDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITG 247
++ + + ++ + ++WT M+ Y + +A + F M Y + T ++
Sbjct: 195 LEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNA 254
Query: 248 FCKVGMLENARLLFE------RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDM 300
G++E R FE RI+P+ ++ M+ ++G+ ++A G+IK M M
Sbjct: 255 CSHSGLVEEGRYYFETMSKRYRIEPR-LDHYSCMVDLMGRSGLLQDAY----GLIKEMPM 309
Query: 301 QPDDATLVSVFTAC 314
+P ++ AC
Sbjct: 310 EPSSGVWGALLGAC 323
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 189/630 (30%), Positives = 298/630 (47%), Gaps = 116/630 (18%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV- 109
FV ++ I A GKI A +LFD++ KD + WN ++ GY + G F M +
Sbjct: 170 FVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMD 229
Query: 110 ---KNIVSWNCMIAGC--------------------------IDND---------RIDDA 131
N V+++C+++ C I N R DDA
Sbjct: 230 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDA 289
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS--------------- 176
F+ M +T T+N MISG+++ G +EE+ F +M V+
Sbjct: 290 IKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKF 349
Query: 177 ------------------------YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+A++D + K V A+ + + +VV +T MI
Sbjct: 350 ENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMI 409
Query: 213 TGYVKNERFCEARELFYRM------PD-------------------------------YD 235
+GY+ N +A E+F + P+ +D
Sbjct: 410 SGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFD 469
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ A+I + K G + A +F R+ +D VS+N+MI AQ+ A+ +F M
Sbjct: 470 NRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 529
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ D ++ + +AC+ L + G+ H +I++ +V + +I MY++CG +
Sbjct: 530 GVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNL 589
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSA 414
+ F + N+VSWN+IIAA+ HG + +L F +M +G PD ITFL ++S
Sbjct: 590 KAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISL 649
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V+E + F M + YGI P EHY C+VD+ RAG+L +A++ + MPF D G
Sbjct: 650 CCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAG 709
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VWG+LL A ++ NVEL ++A+ ++ +LDP NS YV++SN +A G W VT+VR LMK
Sbjct: 710 VWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMK 769
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
E+ V K YSWIEI H F+ GD++HP
Sbjct: 770 EREVQKIPGYSWIEINKITHLFVSGDVNHP 799
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 109/180 (60%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D N FV +++I + + G ++ A LF+R+ KDCV +N M+ GYA+ G ++ ++ FS
Sbjct: 166 DCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSL 225
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + P+ T V + C++ L++ G Q H LV+ +G + S+ N++++MYS+CG
Sbjct: 226 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGR 285
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
D+ FR + + V+WN +I+ + Q G E++LIFF +M +G PD ITF SLL +
Sbjct: 286 FDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPS 345
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 204/439 (46%), Gaps = 24/439 (5%)
Query: 64 GKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNC 117
G S ++F ++ ++ + WN+II+ + + G L ++ + M ++ ++ C
Sbjct: 80 GSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPC 139
Query: 118 MIAGCI---DNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
++ C+ + I+ D ++ + N +++I +L++G+++ A +LF+++ +++
Sbjct: 140 LVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKD 199
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL------ 227
+ + ML+G+ K G D M + V + C ++ L
Sbjct: 200 CVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLS---VCASKLLIDLGVQ 256
Query: 228 ---FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+ D + ++++ + K G ++A LF + D V++N MI+GY Q+G+
Sbjct: 257 LHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGL 316
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EE+L F MI + PD T S+ + S + L RQ H ++R+ ++ + +A
Sbjct: 317 MEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSA 376
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+I Y +C G+ ++ F Q +S ++V + +I+ + +G AL F + P+
Sbjct: 377 LIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPN 436
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
IT +S+L G + +L ++K G ++D+ ++ G++ A++I
Sbjct: 437 EITLVSILPVIGGLLALKLGRELHGFIIK-KGFDNRCNIGCAVIDMYAKCGRMNLAYEIF 495
Query: 465 QGMPFEADTGVWGSLLAAC 483
G + D W S++ C
Sbjct: 496 -GRLSKRDIVSWNSMITRC 513
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 169/371 (45%), Gaps = 19/371 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-P 108
+F+ +A I A + +S A+++F Q + DV+ + A+I+GY NG ++ +F+ +
Sbjct: 371 IFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVK 430
Query: 109 VK------NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN-AMISGFLKHGRLEE 161
VK +VS +I G + + + N A+I + K GR+
Sbjct: 431 VKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL 490
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGY 215
A +F ++ +R+++S+ +M+ + A + M + +S +
Sbjct: 491 AYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACAN 550
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ +E F +A F +V+ + +I + K G L+ A +F+ ++ K+ VS+N++
Sbjct: 551 LPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSI 610
Query: 276 IAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRN 333
IA Y +G +++L LF M+ K +PD T + + + C + ++EG R +
Sbjct: 611 IAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDY 670
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIF 392
G + V+ ++ R G + ++ + + P+ W T++ A H + E A +
Sbjct: 671 GIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVA 730
Query: 393 FSQMGLNGFDP 403
S+ L DP
Sbjct: 731 SSR--LMDLDP 739
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 112/251 (44%), Gaps = 8/251 (3%)
Query: 235 DKNVFVVTAMITGFCKVG-MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D+ + + AM F G M I+P +N++I+ + + G+ +AL +
Sbjct: 69 DERILGMYAMCGSFSNCGKMFYRLDSRLSSIRP-----WNSIISSFVRMGLLNQALAFYF 123
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ + PD +T + AC AL+ V G + N V +++I Y G
Sbjct: 124 KMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYG 183
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I + F ++ + V WN ++ +A+ G + + FS M ++ P+ +TF +LS
Sbjct: 184 KIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLS 243
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
C ++ + L L+V V G+ L+ + S+ G+ + A ++ + M ADT
Sbjct: 244 VCASKLLIDLGVQLHGLVV-VSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMS-RADT 301
Query: 474 GVWGSLLAACV 484
W +++ V
Sbjct: 302 VTWNCMISGYV 312
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS--PNLV 371
CS L LL +G+Q H VI N + ++ MY+ CG + F ++ S ++
Sbjct: 41 CSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIR 100
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
WN+II++F + G +AL F+ +M G PD TF L+ AC
Sbjct: 101 PWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 144
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 7 FHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALS 61
F Q + I F + I + +C N S I F ++ V+ + I +
Sbjct: 526 FRQMGVSGICFDCV-SISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYA 584
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK-----NIVSWN 116
+ G + AA +FD M K++++WN+II Y +G L++S LF M K + +++
Sbjct: 585 KCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFL 644
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMP 170
+I+ C +D+ +F++M + Y ++ F + GRL EA + MP
Sbjct: 645 EIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMP 703
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 178/579 (30%), Positives = 301/579 (51%), Gaps = 64/579 (11%)
Query: 46 STQYVFVNNA-KISALSRAGKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQES 100
+T ++F +NA KISA + G + +QL + + + N I++ Y + +++
Sbjct: 57 NTVHLFCSNALKISA--KKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDA 114
Query: 101 KNLFQSMPVKNIVSWNCMIAGCID-NDRIDDA-----FDYFQAM------PERNTATYNA 148
K LF+ +PV+N+VSWN MI + ND + + F YF+ M P+ T+N
Sbjct: 115 KKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDH--ITFNG 172
Query: 149 MISGFLKHGRLEEATRL--FEQMPRRNVISYT--AMLDGFMKKGEVDKARALSDYMSFKN 204
+I + +E +L F ++ + A++ + K G V+ AR + +S ++
Sbjct: 173 LICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRD 232
Query: 205 VVSWTVMITGYVKNERFCEARELFYRM--------------------------------- 231
+V W VM++ YV N EA +F M
Sbjct: 233 LVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQV 292
Query: 232 ------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+D +V V +A+I + K + +AR +F+ + ++ V++N MI G+ +G
Sbjct: 293 HSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDG 352
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
E ++L M++ PD+ T+ S+ ++C + E Q H ++ + +SV N++
Sbjct: 353 NEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSL 412
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I+ YS+CG I + F P+LV+W ++I A+A HG EK+ F +M G PD
Sbjct: 413 ISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDR 472
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
I FL +LSAC H G V + + F+LM Y I+P SEHYTCLVD+L R G + +A++I +
Sbjct: 473 IAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILR 532
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
MP E D+ G+ + +C ++ N+EL +LAA+K+ ++P+ S Y ++SN++A+ W D
Sbjct: 533 SMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYD 592
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
V R+R M+++ K SWIEIGN++H F+ D SHP
Sbjct: 593 VERIRKTMEDKRDAKVPGCSWIEIGNQIHSFVSNDKSHP 631
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 295/581 (50%), Gaps = 52/581 (8%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQESKNLFQS 106
+V ++ +SA S + +Q+ + + DV N II Y + ++ + LF
Sbjct: 256 YVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNR 315
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN--------TATYNAMIS-GFLKHG 157
+ K++VSW MIAGC+ N DA D F M + T+ N+ S L+ G
Sbjct: 316 LVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKG 375
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
R A + + + + ++D + K + AR + D ++ NVVS+ MI GY +
Sbjct: 376 RQVHAYAIKVNIDNDDFVK-NGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSR 434
Query: 218 NERFCEARELFYRMP-------------------------------------DYDKNVFV 240
++ EA +LF M + F
Sbjct: 435 QDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFA 494
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
+A+I + K + +ARL+FE I +D V +NAM +GY+Q EE+L+L+ + +
Sbjct: 495 GSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRL 554
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+P++ T +V A S + L G+Q H VI+ G + + V N+++ MY++CG I +S
Sbjct: 555 KPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHK 614
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
AF + ++ WN++I+ +AQHG KAL F +M + G P+ +TF+ LLSAC HAG
Sbjct: 615 AFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGL 674
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
++ FE M K +GI P +HY C+V +L RAG++ +A + + MP + VW SLL
Sbjct: 675 LDLGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLL 733
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
+AC ++ +VELG AA+ DP +S Y++LSN++A+ GMW V VR M V K
Sbjct: 734 SACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVK 793
Query: 541 QCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+ +SWIE+ N+VH F+ D +H I L L +Q+K
Sbjct: 794 EPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIK 834
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 214/449 (47%), Gaps = 48/449 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF---- 135
DV N ++ Y + +++ LF +MP +N+V+W+ M++ + +A F
Sbjct: 86 DVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFM 145
Query: 136 QAMPER-NTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFMKKGEV 190
++ E+ N +++ + G L +A +L + + ++V T+++D + K+G V
Sbjct: 146 RSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYV 205
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----------- 233
D+AR + D + K V+WT +I GY K R + +LF +M PD
Sbjct: 206 DEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSAC 265
Query: 234 --------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+D +V VV +I + K ++ R LF R+ KD VS+
Sbjct: 266 SMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWT 325
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
MIAG QN +A+ LF M++ +PD SV +C +LQ L +GRQ H I+
Sbjct: 326 TMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKV 385
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
+ + V N +I MY++C + ++ F + + N+VS+N +I +++ +AL F
Sbjct: 386 NIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLF 445
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M L+ P +TF+SLL + S + L++K +G+ S + L+D+ S+
Sbjct: 446 REMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIK-FGVSLDSFAGSALIDVYSK 504
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ A + + + ++ D VW ++ +
Sbjct: 505 CSCVGDARLVFEEI-YDRDIVVWNAMFSG 532
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 134/556 (24%), Positives = 234/556 (42%), Gaps = 124/556 (22%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES---- 100
F VF+ N + A S+ S A++LFD M ++++TW+++++ Y Q+G+ E+
Sbjct: 82 FHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLF 141
Query: 101 --------------------------KNLFQSMP----------VKNIVSWNCMIAGCID 124
NL Q++ V+++ +I
Sbjct: 142 CRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAK 201
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRRNVIS-- 176
+D+A F + + T T+ A+I+G+ K GR E + +LF QM P R VIS
Sbjct: 202 RGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSV 261
Query: 177 -------------------------------YTAMLDGFMKKGEVDKARALSDYMSFKNV 205
++D ++K +V R L + + K+V
Sbjct: 262 LSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDV 321
Query: 206 VSWTVMITGYVKNERFCEARELFYRM------PD-------------------------- 233
VSWT MI G ++N +A +LF M PD
Sbjct: 322 VSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAY 381
Query: 234 -----YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
D + FV +I + K L NAR +F+ + + VS+NAMI GY++ EA
Sbjct: 382 AIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEA 441
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
L LF M P T VS+ S+L LL Q H L+I+ G + +A+I +
Sbjct: 442 LDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDV 501
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
YS+C + D+ L F +I+ ++V WN + + ++Q E++L + + ++ P+ TF
Sbjct: 502 YSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTF 561
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE---KAWQITQ 465
++++A + + ++K+ G+ LVD+ ++ G +E KA+ T
Sbjct: 562 AAVIAAASNIASLRHGQQFHNQVIKM-GLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTN 620
Query: 466 GMPFEADTGVWGSLLA 481
+ D W S+++
Sbjct: 621 ----QRDIACWNSMIS 632
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 325 QSHVLVIRNGF-EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+H++V+ GF + +V + N ++ YS+ D++ F + NLV+W+++++ + QH
Sbjct: 74 HAHIVVL--GFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQH 131
Query: 384 GHYEKALIFFSQ-MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G+ +AL+ F + M P+ S++ AC G +++++ L +VK G +
Sbjct: 132 GYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVK-GGFVQDVY 190
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
T L+D ++ G +++A I G+ + T W +++A E+ +MRE
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKT-TVTWTAIIAGYAKLGRSEVSLKLFNQMREG 249
Query: 503 D--PQNSAVYVMLS 514
D P + +LS
Sbjct: 250 DVYPDRYVISSVLS 263
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/616 (29%), Positives = 303/616 (49%), Gaps = 84/616 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V + + + G A+++FD++ K+++ WN++I + QNG E+ F M V
Sbjct: 216 IYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRV 275
Query: 110 KNIVSWNCMIAG---------CIDNDR------------------------------IDD 130
+ + ++ ID + ++D
Sbjct: 276 EGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVED 335
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN----------------- 173
A F M E++T T+N ++SG++ +G ++ A L M N
Sbjct: 336 AELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAAD 395
Query: 174 ----------------------VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
V ++++D + K +++ AR + D + ++++ W +
Sbjct: 396 SRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTL 455
Query: 212 ITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP--- 266
+ Y + E +LFY+M NV ++I G G ++ A+ F +Q
Sbjct: 456 LAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGI 515
Query: 267 -KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+ +++ +I G AQNG+ +EA F M + ++P+ ++ S+ +ACS + L GR
Sbjct: 516 CPNLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRA 575
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H + R+ + V +++ MY++CG I ++ F I L +N +I+ +A HG
Sbjct: 576 IHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQ 635
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+AL F ++ PD ITF S+LSACGHAG V E ++LF MV + I+ +EHY
Sbjct: 636 AVEALSLFRRLKEECIKPDEITFTSILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYG 695
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
CLV ILSR+ L++A +I GMPFE D ++GSLLAAC + + EL E +++ +L+P
Sbjct: 696 CLVSILSRSHNLDEALRIILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPD 755
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
NS YV LSN YAA GMW + ++VR LMKE+ ++K +S I+IGNK H F GD SH
Sbjct: 756 NSGNYVALSNAYAATGMWDEASKVRGLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSR 815
Query: 566 IDKIHLELKRASVQMK 581
+I++ L V+M+
Sbjct: 816 TKEIYMMLALLRVEMQ 831
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 212/444 (47%), Gaps = 61/444 (13%)
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA 120
S+ + A +LF ++ ++ +W AI+ + GF QE+ F+ M ++
Sbjct: 126 SKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLL------- 178
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
+DN I AF A+ R ++ + +K G + T++
Sbjct: 179 --LDNFVIPIAFKASGAL--RWIGFGKSVHAYVVKMGL------------GGCIYVATSL 222
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP-------- 232
LD + K G ++A+ + D + KN+V+W MI + +N EA E FY M
Sbjct: 223 LDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQ 282
Query: 233 -------DYDKNVFVV----------------------TAMITGFCKVGMLENARLLFER 263
N+ V+ +++I + KVG++E+A L+F
Sbjct: 283 VTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSE 342
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ KD V++N +++GY NG+ + AL L M +++ D TL S+ A + + L G
Sbjct: 343 MLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLG 402
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
++ H +RN E++V+V +++I MY++C + + F +L+ WNT++AA+A+
Sbjct: 403 KEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQ 462
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
GH + L F QM L G P+ I++ S++ + GKV+++ D F + ++ GI P+
Sbjct: 463 GHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTF-MEMQSLGICPNLIT 521
Query: 444 YTCLVDILSRAGQLEKAWQITQGM 467
+T L+ L++ G ++A+ Q M
Sbjct: 522 WTTLICGLAQNGLGDEAFLTFQSM 545
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 202/440 (45%), Gaps = 43/440 (9%)
Query: 73 FDQMTTKDVITWNAI---ITGYWQNGFLQESKNLFQSMPVKNIV----SWNCMIAGCIDN 125
F Q+ + I++ + I+ + G L E+ +L + +++I + ++ GC+
Sbjct: 32 FSQIASNVQISYKSYLNHISSLCKQGHLLEALDLVTDLELEDITIGPDVYGELLQGCV-- 89
Query: 126 DRIDDAFDYFQAMPER----------NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
+ A Q + R N ++ + K E A RLF ++ +N
Sbjct: 90 --YERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEF 147
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
S+ A++ + G +A M F+ + + +++ +V F + L R +
Sbjct: 148 SWAAIMGLKSRMGFNQEA-----LMGFREMHEYGLLLDNFVIPIAFKASGAL--RWIGFG 200
Query: 236 KNV-------------FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
K+V +V T+++ + K G+ E A+ +F++I K+ V++N+MI + QN
Sbjct: 201 KSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQN 260
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G+ EA+ F M + P TL S +A + L +++EG+Q H L + +G E +
Sbjct: 261 GLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILG 320
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
+++I YS+ G + D+EL F ++ + V+WN +++ + +G ++AL M
Sbjct: 321 SSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLR 380
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
D +T S+++A + + + V+ + + ++D+ ++ +LE A +
Sbjct: 381 FDSVTLASIMAAAADSRNLKLGKEGHSFCVR-NNLESDVAVASSIIDMYAKCEKLECARR 439
Query: 463 ITQGMPFEADTGVWGSLLAA 482
+ + D +W +LLAA
Sbjct: 440 VFDATA-KRDLIMWNTLLAA 458
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 11/226 (4%)
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+ I+ + G EAL L + + D+ + C + L+ G+Q H +
Sbjct: 45 SYLNHISSLCKQGHLLEALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRI 104
Query: 331 IRNG--FEANVSVCNAVITMYSRCGGILDSELA---FRQIHSPNLVSWNTIIAAFAQHGH 385
++NG N + ++ YS+C +SE+A F ++ N SW I+ ++ G
Sbjct: 105 LKNGESIAKNEYIETKLVIFYSKCD---ESEIANRLFGKLQVQNEFSWAAIMGLKSRMGF 161
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
++AL+ F +M G D A G + + +VK+ G+ T
Sbjct: 162 NQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKM-GLGGCIYVAT 220
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVE 490
L+D+ + G E+A ++ + E + W S++ N LN E
Sbjct: 221 SLLDMYGKCGLCEEAKKVFDKI-LEKNIVAWNSMIVNFTQNGLNAE 265
>gi|356551872|ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Glycine max]
Length = 945
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 192/636 (30%), Positives = 316/636 (49%), Gaps = 68/636 (10%)
Query: 8 HQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQ-----YVFVNNAKISALSR 62
H L P +L+ +CG F + LI + + VNN+ ++ ++
Sbjct: 178 HGVLPDDFLLPKVLK------ACGKFRDIETGRLIHSLVIRGGMCSSLHVNNSILAVYAK 231
Query: 63 AGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN----IVSWNCM 118
G++S A ++F +M ++ ++WN IITGY Q G +++++ F +M + +V+WN +
Sbjct: 232 CGEMSCAEKIFRRMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEPGLVTWNIL 291
Query: 119 IAGCIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEEATRLFEQM----- 169
IA D A D + M + T+ +MISGF + GR+ EA L M
Sbjct: 292 IASYSQLGHCDIAMDLMRKMESFGITPDVYTWTSMISGFTQKGRINEAFDLLRDMLIVGV 351
Query: 170 -PRR---------------------------------NVISYTAMLDGFMKKGEVDKARA 195
P +++ +++D + K G+++ A++
Sbjct: 352 EPNSITIASAASACASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYAKGGDLEAAQS 411
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFC-EARELFYRMPDYDKNVFVVT--AMITGFCKVG 252
+ D M ++V SW +I GY + FC +A ELF +M + D VVT MITGF + G
Sbjct: 412 IFDVMLERDVYSWNSIIGGYCQ-AGFCGKAHELFMKMQESDSPPNVVTWNVMITGFMQNG 470
Query: 253 MLENARLLFERIQPK-----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ A LF RI+ + S+N++I+G+ QN ++AL++F M +M P+ T+
Sbjct: 471 DEDEALNLFLRIEKDGKIKPNVASWNSLISGFLQNRQKDKALQIFRQMQFSNMAPNLVTV 530
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
+++ AC+ L + ++ H R + +SV N I Y++ G I+ S F +
Sbjct: 531 LTILPACTNLVAAKKVKEIHCCATRRNLVSELSVSNTFIDSYAKSGNIMYSRKVFDGLSP 590
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+++SWN++++ + HG E AL F QM +G P +T S++SA HA V+E
Sbjct: 591 KDIISWNSLLSGYVLHGCSESALDLFDQMRKDGLHPSRVTLTSIISAYSHAEMVDEGKHA 650
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
F + + Y I EHY+ +V +L R+G+L KA + Q MP E ++ VW +LL AC I+
Sbjct: 651 FSNISEEYQIRLDLEHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSVWAALLTACRIHK 710
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
N + A + M ELDP+N +LS Y+ G + ++ L KE+ V SWI
Sbjct: 711 NFGMAIFAGEHMLELDPENIITQHLLSQAYSVCGKSWEAQKMTKLEKEKFVKMPVGQSWI 770
Query: 548 EIGNKVHYF-LGGDMSHPCIDKIHLELKRASVQMKS 582
E+ N VH F +G D S P +DKIH LKR +K+
Sbjct: 771 EMNNMVHTFVVGDDQSIPYLDKIHSWLKRVGENVKA 806
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 136/245 (55%), Gaps = 2/245 (0%)
Query: 224 ARELFYRMPDYDK-NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
REL R+ K N FV T +++ + K G L+ AR +F+ ++ ++ +++AMI +++
Sbjct: 103 GRELHTRIGLVRKVNPFVETKLVSMYAKCGHLDEARKVFDEMRERNLFTWSAMIGACSRD 162
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
EE + LF M++ + PDD L V AC + + GR H LVIR G +++ V
Sbjct: 163 LKWEEVVELFYDMMQHGVLPDDFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSLHVN 222
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
N+++ +Y++CG + +E FR++ N VSWN II + Q G E+A +F M G +
Sbjct: 223 NSILAVYAKCGEMSCAEKIFRRMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGME 282
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P +T+ L+++ G + +MDL M + +GI P +T ++ ++ G++ +A+
Sbjct: 283 PGLVTWNILIASYSQLGHCDIAMDLMRKM-ESFGITPDVYTWTSMISGFTQKGRINEAFD 341
Query: 463 ITQGM 467
+ + M
Sbjct: 342 LLRDM 346
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 196/433 (45%), Gaps = 58/433 (13%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
M A C +D+A F M ERN T++AMI + + EE LF M + V+
Sbjct: 127 MYAKC---GHLDEARKVFDEMRERNLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVLPD 183
Query: 178 TAMLDGFMKK---------------------------------------GEVDKARALSD 198
+L +K GE+ A +
Sbjct: 184 DFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKIFR 243
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLEN 256
M +N VSW V+ITGY + +A++ F M + +VT +I + ++G +
Sbjct: 244 RMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEPGLVTWNILIASYSQLGHCDI 303
Query: 257 ARLLFERIQP----KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
A L +++ D ++ +MI+G+ Q G EA L M+ + ++P+ T+ S +
Sbjct: 304 AMDLMRKMESFGITPDVYTWTSMISGFTQKGRINEAFDLLRDMLIVGVEPNSITIASAAS 363
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
AC++++ L+ G + H + ++ ++ + N++I MY++ G + ++ F + ++ S
Sbjct: 364 ACASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYAKGGDLEAAQSIFDVMLERDVYS 423
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WN+II + Q G KA F +M + P+ +T+ +++ G +E+++LF +
Sbjct: 424 WNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITGFMQNGDEDEALNLFLRIE 483
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE---ADTGVWGSLLAACVINLNV 489
K I P+ + L+ + Q +KA QI + M F + ++L AC NL
Sbjct: 484 KDGKIKPNVASWNSLISGFLQNRQKDKALQIFRQMQFSNMAPNLVTVLTILPACT-NL-- 540
Query: 490 ELGELAAKKMREL 502
+AAKK++E+
Sbjct: 541 ----VAAKKVKEI 549
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 159/411 (38%), Gaps = 79/411 (19%)
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------ 231
T ++ + K G +D+AR + D M +N+ +W+ MI ++ ++ E ELFY M
Sbjct: 122 TKLVSMYAKCGHLDEARKVFDEMRERNLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVL 181
Query: 232 ----------------PDYDKNVFVVTAMITG---------------FCKVGMLENARLL 260
D + + + +I G + K G + A +
Sbjct: 182 PDDFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKI 241
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F R+ ++CVS+N +I GY Q G E+A + F M + M+P T
Sbjct: 242 FRRMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEPGLVTW------------- 288
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS----PNLVSWNTI 376
N +I YS+ G + R++ S P++ +W ++
Sbjct: 289 ----------------------NILIASYSQLGHCDIAMDLMRKMESFGITPDVYTWTSM 326
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I+ F Q G +A M + G +P+ IT S SAC ++ ++ + VK
Sbjct: 327 ISGFTQKGRINEAFDLLRDMLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAVKT-S 385
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA-CVINLNVELGELA 495
++ L+D+ ++ G LE A I M E D W S++ C + EL
Sbjct: 386 MVDDILIGNSLIDMYAKGGDLEAAQSIFDVM-LERDVYSWNSIIGGYCQAGFCGKAHELF 444
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
K P N + ++ + G + + L +++ G K SW
Sbjct: 445 MKMQESDSPPNVVTWNVMITGFMQNGDEDEALNLFLRIEKDGKIKPNVASW 495
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/554 (31%), Positives = 287/554 (51%), Gaps = 69/554 (12%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA-GCIDNDR 127
A +F+ + + + WN +I G+ S PV ++ + CM++ G + N
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGH-----------ALSSDPVSSLTLYVCMVSLGLLPNSY 65
Query: 128 I----------DDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEEATRLFEQM 169
F Q + + + + ++IS ++++ RLE+A ++F++
Sbjct: 66 TFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRS 125
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
R+V+SYTA++ G+ +G++ A+ L D + K+VVSW MI+GY + + EA ELF
Sbjct: 126 SHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFE 185
Query: 230 RM------PD-------------------------------YDKNVFVVTAMITGFCKVG 252
M PD +D N+ +V A+I + K G
Sbjct: 186 EMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCG 245
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+E A LF+ + KD +S+N +I GY + +EAL LF M++ P+D T++SV
Sbjct: 246 EVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLP 305
Query: 313 ACSALQLLNEGRQSHVLVIR--NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
AC+ L ++ GR HV + + G S+ ++I MY++CG I + F + +L
Sbjct: 306 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 365
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
SWN +I FA HG + + FS+M G +PD ITF+ LLSAC H+G ++ +F
Sbjct: 366 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 425
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M + Y + P EHY C++D+L +G ++A ++ M E D +W SLL AC ++ NVE
Sbjct: 426 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVE 485
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
L E A+ + +++P+N + Y++LSN+YA+AG W DV R+R L+ + + K S IE+
Sbjct: 486 LAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVD 545
Query: 551 NKVHYFLGGDMSHP 564
+ V F+ GD HP
Sbjct: 546 SVVFEFVVGDKFHP 559
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 212/461 (45%), Gaps = 82/461 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ + IS + ++ A ++FD+ + +DV+++ A+ITGY G ++ ++ LF +PV
Sbjct: 99 LYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPV 158
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
K++VSWN MI+G + +A + F+ M + N +TY ++S G +E ++
Sbjct: 159 KDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQV 218
Query: 166 FEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ A++D + K GEV+ A L +S+K+V+SW +I GY +
Sbjct: 219 HSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLY 278
Query: 222 CEARELFYRM------PD--------------------------YDKNVFVV-------T 242
EA LF M P+ DK + V T
Sbjct: 279 KEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 338
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A +F + K S+NAMI G+A +G A+ + LFS M K+ ++P
Sbjct: 339 SLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEP 398
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD T V + +ACS +L+ GR + ++ Y
Sbjct: 399 DDITFVGLLSACSHSGMLDLGRH---------------IFRSMTQDYKM----------- 432
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+P L + +I G +++A + M + +PDG+ + SLL AC G V
Sbjct: 433 ----TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM---EPDGVIWCSLLKACKMHGNVE 485
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ + ++K+ PSS Y L +I + AG+ E +I
Sbjct: 486 LAESFAQNLIKIEPENPSS--YILLSNIYASAGRWEDVARI 524
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 143/302 (47%), Gaps = 38/302 (12%)
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L A +FE IQ + + +N MI G+A + +L L+ M+ + + P+ T + +
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY------------------------ 349
C+ + EG+Q H V++ GF+ ++ V ++I+MY
Sbjct: 74 CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133
Query: 350 --------SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
SR G I ++ F +I ++VSWN +I+ +A+ G Y++AL F +M
Sbjct: 134 TALITGYASR-GDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNV 192
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
PD T++++LSAC H+G + + V +G + + L+D+ S+ G++E A
Sbjct: 193 RPDESTYVTVLSACAHSGSIELGRQVHS-WVDDHGFDSNLKIVNALIDLYSKCGEVETAC 251
Query: 462 QITQGMPFEADTGVWGSLLAACV-INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
+ QG+ ++ D W +L+ +NL E L + +R + N MLS L A A
Sbjct: 252 GLFQGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV--TMLSVLPACA 308
Query: 521 GM 522
+
Sbjct: 309 HL 310
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 253/464 (54%), Gaps = 39/464 (8%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E + + ++IS ++K+GR ++A ++F+ R+V+SYTA++ G+ +G ++ A+ + D
Sbjct: 135 ELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDE 194
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD-------------------- 233
+ K+VVSW +I+GY EA +LF M PD
Sbjct: 195 IPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLG 254
Query: 234 -----------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
N+ +V A+I + K G +E A LF+ + KD +S+N MI GY
Sbjct: 255 RQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHL 314
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR--NGFEANVS 340
+ +EAL LF M++ P+D T++S+ AC+ L ++ GR HV + + G S
Sbjct: 315 NLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASS 374
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
+ ++I MY++CG I + F +H L + N +I FA HG A FS+M NG
Sbjct: 375 LRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNG 434
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+PD ITF+ LLSAC H+G ++ +F M + Y I P EHY C++D+L G ++A
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEA 494
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
++ M E D +W SLL AC ++ NVELGE A+K+ +++P+N YV+LSN+YA A
Sbjct: 495 EEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATA 554
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
G W +V +R L+ ++G+ K S IEI + VH F+ GD HP
Sbjct: 555 GRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 598
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 205/461 (44%), Gaps = 82/461 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ + IS + G+ A ++FD + +DV+++ A+ITGY G+++ ++ +F +PV
Sbjct: 138 LYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPV 197
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
K++VSWN +I+G D +A D F+ M + N +T ++S + G ++ ++
Sbjct: 198 KDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQV 257
Query: 166 FEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ A++D + K GEV+ A L +S K+V+SW MI GY +
Sbjct: 258 HSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLY 317
Query: 222 CEARELFYRM------PD--------------------------YDKNVFVV-------T 242
EA LF M P+ DK + V T
Sbjct: 318 KEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRT 377
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A +F + + + NAMI G+A +G A A +FS M K ++P
Sbjct: 378 SLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 437
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD T V + +ACS +L+ GR+ I N +
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRR-----IFRSMTQNYKI--------------------- 471
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+P L + +I G +++A + M + +PDG+ + SLL AC G V
Sbjct: 472 ----TPKLEHYGCMIDLLGHLGLFKEAEEMINTMTM---EPDGVIWCSLLKACKMHGNVE 524
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ ++K+ P S Y L +I + AG+ + I
Sbjct: 525 LGESFAQKLIKIEPENPGS--YVLLSNIYATAGRWNEVANI 563
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 142/271 (52%), Gaps = 42/271 (15%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE------- 286
Y+ +++V T++I+ + K G ++A +F+ +D VS+ A+I GYA G E
Sbjct: 134 YELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFD 193
Query: 287 ------------------------EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
EAL LF M+K +++PD++T+V+V +AC+ +
Sbjct: 194 EIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQL 253
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
GRQ H + +G +N+ + NA+I +YS+CG + + F+ + + +++SWNT+I +
Sbjct: 254 GRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTH 313
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY------G 436
Y++AL+ F +M +G +P+ +T LS+L AC G ++ F + VY G
Sbjct: 314 LNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAID-----FGRWIHVYIDKRIKG 368
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+ +S T L+D+ ++ G +E A Q+ M
Sbjct: 369 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 399
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 36/295 (12%)
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+FE IQ + + +N M G+A + A++L+ MI + + P+ T + +C+ L++
Sbjct: 59 VFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKV 118
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG-------------------------- 353
EG+Q H V++ G+E ++ V ++I+MY + G
Sbjct: 119 SKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITG 178
Query: 354 ----GILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
G ++S + F +I ++VSWN II+ +A G+ ++AL F +M PD T
Sbjct: 179 YASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTM 238
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
++++SAC +G + + + +G+ + + L+D+ S+ G++E A + QG+
Sbjct: 239 VTVVSACAQSGSIQLGRQVHS-WIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLS 297
Query: 469 FEADTGVWGSLLAACV-INLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
D W +++ +NL E L + +R + N MLS L A A +
Sbjct: 298 -NKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDV--TMLSILPACAQL 349
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/505 (32%), Positives = 273/505 (54%), Gaps = 40/505 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N+ I S++G + + R++FD+M +DV++WN++I+GY NGFL+ S L SM ++
Sbjct: 161 VCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASMRIRG 220
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
E + T+N ++ + + G +EA +FEQ+
Sbjct: 221 F---------------------------EPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKE 253
Query: 172 RNVISYTAMLDGFMKKGEVDKA-----RALSDYMSFKNVVSW-TVMITGYVKNERFCEAR 225
N+IS T ++ G+ + G +K+ +S ++F ++ S +V+++ C
Sbjct: 254 PNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQE 313
Query: 226 ELFYRMPDYDKNVFVVT---AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
Y + D + F + A++T + K +++A +FE + D V++NAMI G+
Sbjct: 314 IHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILGFVDL 373
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
+ AL FS M + + + T+ +V AC L G+Q H + +N F + + V
Sbjct: 374 EMGHLALECFSKMQRSGIMNNQITISTVLPACD----LKSGKQVHAYITKNSFSSVIPVW 429
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
NA+I MYS+CG I + F + S +LVSWNT+I F HG + AL M +
Sbjct: 430 NALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVC 489
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P+ +TF S LSAC H+G V+E M+LF M + +G P EH++C+VD+L+RA +LE A
Sbjct: 490 PNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVG 549
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ MP + +W +LLAAC NV + +LAA+++ +L+P+++ YV LSN+YA AG
Sbjct: 550 FIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVTLSNIYARAGR 609
Query: 523 WRDVTRVRLLMKEQGVTKQCAYSWI 547
W D VR LM+++G+ K YSWI
Sbjct: 610 WDDAVAVRKLMEDRGLVKPSGYSWI 634
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 127/233 (54%), Gaps = 5/233 (2%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D + F++T ++ + G L +A+ LF+++ + ++ A++ Y++NG+++E +R +S
Sbjct: 55 DHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSE 114
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + PD VF AC L L G Q H V+ G E ++ VCN++I MYS+ G
Sbjct: 115 MKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGD 174
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ F ++ +++SWN++I+ + +G E ++ + M + GF+PD +T+ +++ A
Sbjct: 175 VGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMVTWNTVMDA 234
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
G +E+ ++FE + + P+ T LV SR G EK+ I + M
Sbjct: 235 YCRMGLCDEAWEIFEQIKE-----PNIISLTTLVSGYSRIGNHEKSLGIFREM 282
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 174/423 (41%), Gaps = 88/423 (20%)
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS--------- 207
G L A LF+++ + NV ++TA+L + + G D+ M K V+
Sbjct: 72 GDLGSAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVF 131
Query: 208 -------W---------TVMITG--------------YVKNERFCEARELFYRMPDYDKN 237
W V+I G Y K+ R +F M +++
Sbjct: 132 RACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEM--VERD 189
Query: 238 VFVVTAMITGF-----------------------------------CKVGMLENARLLFE 262
V +MI+G+ C++G+ + A +FE
Sbjct: 190 VLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFE 249
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ-PDDATLVSVFTACSALQLLN 321
+I+ + +S +++GY++ G E++L +F M+ + PD +L SV +C L L
Sbjct: 250 QIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALV 309
Query: 322 EGRQSHVLVIRNGFEANV--SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
G++ H IR+ ++ S A++TMY +C I D+ F + ++V+WN +I
Sbjct: 310 CGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILG 369
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
F AL FS+M +G + IT ++L AC K + + + +IP
Sbjct: 370 FVDLEMGHLALECFSKMQRSGIMNNQITISTVLPACDL--KSGKQVHAYITKNSFSSVIP 427
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+ L+ + S+ G + A+ I M D W +++ ++ LG+ A + +
Sbjct: 428 V---WNALIHMYSKCGCIGTAYSIFSNM-ISRDLVSWNTMIGGFGMH---GLGQFALQLL 480
Query: 500 REL 502
R++
Sbjct: 481 RDM 483
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
CS + L++G+Q H +I G + + + ++ MY+ CG + ++ F ++ PN+ +W
Sbjct: 33 CSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPNVFAW 92
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
I+ ++++G ++ + +S+M L G PD F + ACG + + + + +V
Sbjct: 93 TAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVV- 151
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN----LNV 489
+ G + L+D+ S++G + ++ M E D W S+++ V N +V
Sbjct: 152 ICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEM-VERDVLSWNSMISGYVCNGFLEFSV 210
Query: 490 ELGELAAKKMRELDP 504
EL LA+ ++R +P
Sbjct: 211 EL--LASMRIRGFEP 223
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 94/246 (38%), Gaps = 56/246 (22%)
Query: 7 FHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYV----FVNNAKISALS- 61
F + +R+ FP + + S SC + I + + V F +A + L+
Sbjct: 279 FREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTM 338
Query: 62 --RAGKISAARQLFDQMTTKDVITWNAIITGY----------------WQNGFLQESKNL 103
+ +I A +F+ M DV+TWNA+I G+ ++G + +
Sbjct: 339 YVKCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITI 398
Query: 104 FQSMPVKNIVS-------------------WNCMI-----AGCIDNDRIDDAFDYFQAMP 139
+P ++ S WN +I GCI A+ F M
Sbjct: 399 STVLPACDLKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGT-----AYSIFSNMI 453
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARA 195
R+ ++N MI GF HG + A +L M +V +++T+ L G VD+
Sbjct: 454 SRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGME 513
Query: 196 LSDYMS 201
L M+
Sbjct: 514 LFHTMT 519
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/458 (37%), Positives = 251/458 (54%), Gaps = 10/458 (2%)
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+DR+D + P+ T Y + I G A L +M R +I + L
Sbjct: 80 SDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSS 139
Query: 185 MKKGE-VDKARALSDYMSFKNVVSW-----TVMITGYVKNERFCEARELFYRMPDYDKNV 238
+ + RAL Y +FK ++ T ++ Y + AR LF MPD +V
Sbjct: 140 LPACHGLALGRALHAY-AFKLALAGDSYVATALLGMYARGGDADAARALFDEMPD--PHV 196
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
VTAM+T + K+G L++AR LF+ + KD + +NAMI GY Q+G EALRLF M++
Sbjct: 197 VPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRS 256
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILD 357
+ PD+ ++ +A + L GR H V + + N V A+I MY +CG + D
Sbjct: 257 GVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLED 316
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F I ++V WN +I +A HG KAL FSQ+ G P ITF+ LL+AC H
Sbjct: 317 AVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSH 376
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
+G V+E F+ M + Y I+P EHY C+VD+L RAG +E+A+ + Q M DT +W
Sbjct: 377 SGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWV 436
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
SLLAAC ++ N+ LG+ A + NS +Y++LSN+YAA G W +V RVR +MK G
Sbjct: 437 SLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASG 496
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+ K+ S IE+G KV+ F+ GDMSHP D+I+ L++
Sbjct: 497 IQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEK 534
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 192/507 (37%), Gaps = 119/507 (23%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+V A + +R G AAR LFD+M V+ A++T Y + G L +++ LF MP K
Sbjct: 166 YVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSK 225
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+ + WN M I G+ +HGR EA RLF M
Sbjct: 226 DFICWNAM-------------------------------IDGYTQHGRPNEALRLFRWML 254
Query: 171 RRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFK-----NVVSWTVMITGYVKNERF 221
R V ++ L + G + R L Y+ N T +I Y K
Sbjct: 255 RSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSL 314
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
+A +F + DK++ V AMI G YA
Sbjct: 315 EDAVSVFNSIG--DKDIVVWNAMING-------------------------------YAM 341
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
+G + +AL +FS + + P D T + + ACS L++EG Q F++
Sbjct: 342 HGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQF--------FQS---- 389
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
++ E A P + + ++ + G E+A M +
Sbjct: 390 --------------MEEEYAI----VPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIA-- 429
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVK--VYGIIPSSEHYTCLVDILSRAGQLEK 459
PD + ++SLL+AC +++++M L + + V G + +S Y L +I + G E+
Sbjct: 430 -PDTVMWVSLLAAC----RLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEE 484
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
++ M G I + ++ E A M P+ +Y ML +
Sbjct: 485 VARVRSMMKASGIQKEPG----CSAIEVGRKVYEFVAGDMSH--PRTDEIYAMLEKMNGI 538
Query: 520 AGMWRDVTRVRLLMKE-QGVTKQCAYS 545
V + L++ + VTK+ A +
Sbjct: 539 VKEQGHVPQTELVLHDLDEVTKEKALA 565
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/458 (37%), Positives = 251/458 (54%), Gaps = 10/458 (2%)
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+DR+D + P+ T Y + I G A L +M R +I + L
Sbjct: 79 SDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSS 138
Query: 185 MKKGE-VDKARALSDYMSFKNVVSW-----TVMITGYVKNERFCEARELFYRMPDYDKNV 238
+ + RAL Y +FK ++ T ++ Y + AR LF MPD +V
Sbjct: 139 LPACHGLALGRALHAY-AFKLALAGDSYVATALLGMYARGGDADAARALFDEMPD--PHV 195
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
VTAM+T + K+G L++AR LF+ + KD + +NAMI GY Q+G EALRLF M++
Sbjct: 196 VPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRS 255
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILD 357
+ PD+ ++ +A + L GR H V + + N V A+I MY +CG + D
Sbjct: 256 GVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLED 315
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F I ++V WN +I +A HG KAL FSQ+ G P ITF+ LL+AC H
Sbjct: 316 AVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSH 375
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
+G V+E F+ M + Y I+P EHY C+VD+L RAG +E+A+ + Q M DT +W
Sbjct: 376 SGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWV 435
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
SLLAAC ++ N+ LG+ A + NS +Y++LSN+YAA G W +V RVR +MK G
Sbjct: 436 SLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASG 495
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+ K+ S IE+G KV+ F+ GDMSHP D+I+ L++
Sbjct: 496 IQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEK 533
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 192/507 (37%), Gaps = 119/507 (23%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+V A + +R G AAR LFD+M V+ A++T Y + G L +++ LF MP K
Sbjct: 165 YVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSK 224
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+ + WN M I G+ +HGR EA RLF M
Sbjct: 225 DFICWNAM-------------------------------IDGYTQHGRPNEALRLFRWML 253
Query: 171 RRNV----ISYTAMLDGFMKKGEVDKARALSDYMSFK-----NVVSWTVMITGYVKNERF 221
R V ++ L + G + R L Y+ N T +I Y K
Sbjct: 254 RSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSL 313
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
+A +F + DK++ V AMI G YA
Sbjct: 314 EDAVSVFNSIG--DKDIVVWNAMING-------------------------------YAM 340
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
+G + +AL +FS + + P D T + + ACS L++EG Q F++
Sbjct: 341 HGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQF--------FQS---- 388
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
++ E A P + + ++ + G E+A M +
Sbjct: 389 --------------MEEEYAI----VPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIA-- 428
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVK--VYGIIPSSEHYTCLVDILSRAGQLEK 459
PD + ++SLL+AC +++++M L + + V G + +S Y L +I + G E+
Sbjct: 429 -PDTVMWVSLLAAC----RLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEE 483
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAA 519
++ M G I + ++ E A M P+ +Y ML +
Sbjct: 484 VARVRSMMKASGIQKEPG----CSAIEVGRKVYEFVAGDMSH--PRTDEIYAMLEKMNGI 537
Query: 520 AGMWRDVTRVRLLMKE-QGVTKQCAYS 545
V + L++ + VTK+ A +
Sbjct: 538 VKEQGHVPQTELVLHDLDEVTKEKALA 564
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/537 (31%), Positives = 282/537 (52%), Gaps = 16/537 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV NA I S G ++ AR LFD++ KDV++W+ +I Y ++G L E+ +L + M V
Sbjct: 159 VFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHV 218
Query: 110 KNI-------VSWNCMIAGCIDNDRIDDAFDYFQ---AMPERNTATYNAMISGFLKHGRL 159
+ +S ++A D Y + A+I ++K L
Sbjct: 219 MRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENL 278
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
A R+F+ + + ++IS+TAM+ ++ +++ L M + + + + VK
Sbjct: 279 AYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKEC 338
Query: 220 RFCEAREL------FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
A EL F + ++ + TA I + K G + +AR +F+ + KD + ++
Sbjct: 339 GTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWS 398
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
AMI+ YAQN +EA +F M ++P++ T+VS+ C+ L G+ H + +
Sbjct: 399 AMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQ 458
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
G + ++ + + + MY+ CG I + F + ++ WN +I+ FA HGH E AL F
Sbjct: 459 GIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELF 518
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M G P+ ITF+ L AC H+G + E LF MV +G P EHY C+VD+L R
Sbjct: 519 EEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGR 578
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
AG L++A ++ + MP + V+GS LAAC ++ N++LGE AAK+ L+P S V++
Sbjct: 579 AGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLM 638
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
SN+YA+A W DV +R MK++G+ K+ S IE+ +H F+ GD HP K++
Sbjct: 639 SNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVY 695
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 4/251 (1%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ +VFV A+I + +VG L ARLLF++I+ KD VS++ MI Y ++G+ +EAL L
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG--FEANVSVCNAVITMYSR 351
M M ++P + ++S+ + L L G+ H V+RNG ++ V +C A+I MY +
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
C + + F + +++SW +IAA+ + + + F +M G P+ IT LSL
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+ CG AG + E L G S T +D+ + G + A +
Sbjct: 335 VKECGTAGAL-ELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFK-SK 392
Query: 472 DTGVWGSLLAA 482
D +W +++++
Sbjct: 393 DLMMWSAMISS 403
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 8/212 (3%)
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+I Y +N +A ++++ M D + D+ + SV AC + G++ H V++NG
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F +V VCNA+I MYS G + + L F +I + ++VSW+T+I ++ + G ++AL
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 395 QMGLNGFDPDGITFLSLLSACGHAG--KVNESMDLFELMVKVYGI--IPSSEHYTCLVDI 450
M + P I +S+ K+ ++M + + G +P T L+D+
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLC---TALIDM 271
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ L A ++ G+ +A W +++AA
Sbjct: 272 YVKCENLAYARRVFDGLS-KASIISWTAMIAA 302
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 109/270 (40%), Gaps = 53/270 (19%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVF-----VNNAKISALSRAGKISAAR 70
+FP + +LS CG L+ F+ + F + A I + G + +AR
Sbjct: 324 MFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSAR 383
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP-------VKNIVSW--NCMIAG 121
+FD +KD++ W+A+I+ Y QN + E+ ++F M + +VS C AG
Sbjct: 384 SVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAG 443
Query: 122 CIDNDR------------------------------IDDAFDYFQAMPERNTATYNAMIS 151
++ + ID A F +R+ + +NAMIS
Sbjct: 444 SLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMIS 503
Query: 152 GFLKHGRLEEATRLFEQMPRRNV----ISYTAML-----DGFMKKGEVDKARALSDYMSF 202
GF HG E A LFE+M V I++ L G +++G+ + + ++
Sbjct: 504 GFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFT 563
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMP 232
V + M+ + EA EL MP
Sbjct: 564 PKVEHYGCMVDLLGRAGLLDEAHELIKSMP 593
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/567 (31%), Positives = 293/567 (51%), Gaps = 15/567 (2%)
Query: 12 LKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQ 71
+ + IL++L T D+ G C +L + FV A I A S G + AR
Sbjct: 146 VNHFVLTTILKVLVTMDAPG-LACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARC 204
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVSWNCMIAGCIDN 125
+FD + KD +TW A+++ Y +N + + N F M P +++ A C+ +
Sbjct: 205 VFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSS 264
Query: 126 DRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
+ +T + A++ + K G +E+A +FE +P +VI ++ ++
Sbjct: 265 ALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISR 324
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK---NERFCEARELFYRMP---DYDKN 237
+ + + ++A + M VV ++G ++ N F E E + + Y+
Sbjct: 325 YAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESE 384
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+FV A++ + K +EN+ +F +Q + VS+N +I GY Q+G AE+AL +F M
Sbjct: 385 LFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRA 444
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
M T SV AC+ + Q H L+ ++ F + VCN++I Y++CG I D
Sbjct: 445 AHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRD 504
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F I ++VSWN+II+A+A HG AL F +M + + +TF+SLLS CG
Sbjct: 505 ALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGS 564
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
G VN+ + LF M+ + I PS EHYTC+V +L RAG+L A + +P VW
Sbjct: 565 TGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWR 624
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+LL++CV++ NV LG AA+K+ +++P + YV+LSN+YAAAG+ +V R M+ G
Sbjct: 625 ALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVG 684
Query: 538 VTKQCAYSWIEIGNKVHYFLGGDMSHP 564
V K+ SW+EI +VH F G HP
Sbjct: 685 VKKEAGLSWVEIKGEVHAFSVGSADHP 711
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 165/353 (46%), Gaps = 24/353 (6%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-------- 193
+T N +++ + K G L A RLF+ MP RN +S+ ++ G+ +GE ++A
Sbjct: 81 DTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQ 140
Query: 194 RALSDYMSFKNVVSWTVMIT----GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFC 249
R + F V++T G C + +D+N FV TA+I +
Sbjct: 141 REGHEVNHFVLTTILKVLVTMDAPGLACGIHACACK------LGHDRNAFVGTALIDAYS 194
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
G + +AR +F+ I KD V++ AM++ Y++N + E AL FS M +P+ L S
Sbjct: 195 LCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTS 254
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
A L G+ H ++ ++ V A++ MY++CG I D+ F I +
Sbjct: 255 ALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDD 314
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
++ W+ +I+ +AQ E+A F +M + P+ + +L AC + + +
Sbjct: 315 VILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHN 374
Query: 430 LMVKVYGIIPSSEHYT--CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
L +K+ SE + L+D+ ++ +E + +I + +A+ W +++
Sbjct: 375 LAIKLG---YESELFVGNALMDMYAKCRNMENSLEIFSSLQ-DANEVSWNTII 423
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 8/248 (3%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+ F ++ + K+G L AR LF+ + ++ VSF ++ GYA G EEAL LF +
Sbjct: 81 DTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQ 140
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ + + L ++ + H + G + N V A+I YS CG +
Sbjct: 141 REGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVC 200
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA-- 414
+ F I + V+W +++ ++++ E AL FS+M + GF P+ S L A
Sbjct: 201 HARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAV 260
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHY-TCLVDILSRAGQLEKAWQITQGMPFEADT 473
C + + + + V + + H L+D+ ++ G +E A I + +P + D
Sbjct: 261 CLSSALLGKGIH----GCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHD-DV 315
Query: 474 GVWGSLLA 481
+W L++
Sbjct: 316 ILWSFLIS 323
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/573 (30%), Positives = 291/573 (50%), Gaps = 47/573 (8%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
+++ N AK+ +L A +I + QL + N ++ Y + G + + LF +
Sbjct: 101 KHLLNNAAKLKSLKHATQIHS--QLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTY 158
Query: 108 P--VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEE 161
P N+V+W +I +++ A +F M N T++A++ L E
Sbjct: 159 PHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSE 218
Query: 162 ATRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
++ + + ++ TA+LD + K G + A + D M +N+VSW MI G+VK
Sbjct: 219 GQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVK 278
Query: 218 NERFCEA----RELFYRMPD------------------YDKNV-------------FVVT 242
N+ + A RE+ PD + K V +V
Sbjct: 279 NKLYGRAIGVFREVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKN 338
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
+++ +CK G+ E+A LF +D V++N MI G + E+A F MI+ ++P
Sbjct: 339 SLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEP 398
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D+A+ S+F A +++ L +G H V++ G N + ++++TMY +CG +LD+ F
Sbjct: 399 DEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVF 458
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
R+ N+V W +I F QHG +A+ F +M G P+ ITF+S+LSAC H GK++
Sbjct: 459 RETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKID 518
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ F M V+ I P EHY C+VD+L R G+LE+A + + MPFE D+ VWG+LL A
Sbjct: 519 DGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGA 578
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
C + NVE+G A+++ +L+P N Y++LSN+Y GM + VR LM GV K+
Sbjct: 579 CGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKES 638
Query: 543 AYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
SWI++ N+ F D SH +I+ L++
Sbjct: 639 GCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQK 671
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 11/240 (4%)
Query: 289 LRLF----SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
L+LF SG+ K L + + L+ L Q H ++ A+++ N
Sbjct: 78 LQLFTSYQSGVPKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINT 137
Query: 345 VITMYSRCGGILDSELAFRQIHSP--NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
++ +Y++CG I + L F P N+V+W T+I ++ +AL FF++M G
Sbjct: 138 LLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIY 197
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P+ TF ++L AC HA ++E + L+ K + + T L+D+ ++ G + A
Sbjct: 198 PNHFTFSAILPACAHAALLSEGQQIHALIHK-HCFLNDPFVATALLDMYAKCGSMLLAEN 256
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
+ MP + W S++ V N +++ L P ++ +LS A AG+
Sbjct: 257 VFDEMPHR-NLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLS---ACAGL 312
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 202/641 (31%), Positives = 303/641 (47%), Gaps = 114/641 (17%)
Query: 21 LRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRAGKISAARQLFDQ 75
L ++S C + + SS I +Y F+ N+ I+ + G +S+AR LFD
Sbjct: 62 LSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDS 121
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF 135
+ D ++ N +++GY + L+ ++ LF MP + VS+ MI G ND +A + F
Sbjct: 122 CSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVF 181
Query: 136 QAMPERNTATYN----------------------------------AMISGFLKH----- 156
+ M A +IS L H
Sbjct: 182 KDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVF 241
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
L++ RLF +MP RN +S+ ML G++K G VD+AR L + + ++V SW +MI G+V
Sbjct: 242 SSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFV 301
Query: 217 KNERFCEARELFYRMPDYD--------------------------------KNVFV---- 240
+ +R +A L+ M D KN FV
Sbjct: 302 QMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDF 361
Query: 241 VTAMITGF---CK------------------------VGMLEN-----ARLLFERIQPKD 268
+ A I F C+ VG +N AR +F+ + KD
Sbjct: 362 IQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKD 421
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
S++ MI+GYAQN + + AL LF GMI ++P++ T+VSVF+A +AL L EGR +H
Sbjct: 422 VFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHE 481
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAFAQHGHY 386
V N ++ A+I MY++CG I + FRQI + + WN II A HGH
Sbjct: 482 YVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHA 541
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
+L FS + + ITFL +LSAC HAG V F M +G+ P+ +HY C
Sbjct: 542 NLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGC 601
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
LVD+L R G+L +A +I + MP +AD +WG+LLA+ + VE+GE AA+ + L P +
Sbjct: 602 LVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPSH 661
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
V+LSNLYA AG+W D VR ++ Q + + YS +
Sbjct: 662 GPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYSGV 702
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 31/163 (19%)
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF- 362
+ ++VS C++ ++ G+Q H +V++ GF +N + N++I MY +CG + + L F
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 363 --------------------RQIHSP----------NLVSWNTIIAAFAQHGHYEKALIF 392
RQ+ + VS+ T+I AQ+ + +A+
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
F M G P+ +T S++SAC H G + L L++K++
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLH 223
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 187/583 (32%), Positives = 296/583 (50%), Gaps = 52/583 (8%)
Query: 51 FVNNAKISALSRAGKISAARQL----FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
+V ++ ++A S G + +Q+ T DV T+N +I Y + G ++ K LF
Sbjct: 244 YVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDR 303
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATYNAMISG---FLKHG 157
+ VKNI+SW MIAG + N +A + M P+ + G L+HG
Sbjct: 304 LDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHG 363
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
R + + + N ++ A++D + K +D A+ + D ++ +VV + MI GY +
Sbjct: 364 RQIHSYVIKVCLEHDNFVT-NALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSR 422
Query: 218 NERFCEARELFYRM------PDY------------------DKNV-------------FV 240
C A E+F M P + K + F
Sbjct: 423 QGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFT 482
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
+A+I + K + +AR +FE KD V +N++ +GY +EEA +L+S +
Sbjct: 483 SSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRE 542
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+P++ T ++ TA S L L G+Q H V++ G E++ + NA++ MY++CG + ++E
Sbjct: 543 RPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEK 602
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + WN++I+ +AQHG E+AL F M N +P+ +TF+S+LSAC H G
Sbjct: 603 IFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGF 662
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
V + + + M + YGI P EHY +V +L RAG+L +A + + M VW SLL
Sbjct: 663 VEDGLQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLL 721
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
+AC + NVEL + AA+ +DP +S YVMLSN++A+ GMW DV R+RL M GV K
Sbjct: 722 SACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVK 781
Query: 541 QCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+ SWIE+ +VH F+ D H D I+L L + QMK V
Sbjct: 782 EPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKDV 824
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 226/471 (47%), Gaps = 24/471 (5%)
Query: 39 NCLIRLFSTQY-VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
+C + L+ QY VF++N + + + G + A LFD+M +++++W+++++ Y Q G+
Sbjct: 63 HCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYN 122
Query: 98 QESKNLFQSMPVKNIVSWN-----CMIAGCIDNDRIDDAFDYFQAMPE----RNTATYNA 148
+++ F + N +I C+ D + + + + +
Sbjct: 123 EKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTS 182
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
++ + KHG +++A +F+ + + +++TA++ G+ K G + + L + M NV+
Sbjct: 183 LVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPD 242
Query: 209 TVMIT---------GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
+++ GY+K + A L + +V +I + K G ++ +
Sbjct: 243 KYVLSSILNACSVLGYLKGGKQIHAYVL---RSETKMDVSTYNVLIDFYTKCGRVKAGKA 299
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LF+R+ K+ +S+ MIAGY QN EA+ L M +M +PD+ SV T+C ++
Sbjct: 300 LFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDA 359
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L GRQ H VI+ E + V NA+I MYS+C + D++ F + ++V +N +I
Sbjct: 360 LQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEG 419
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+++ G+ AL F +M L P +TF+SLL + S + L++K YG
Sbjct: 420 YSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIK-YGFSL 478
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
+ L+D+ S+ + A + +G D VW SL + + L E
Sbjct: 479 DKFTSSALIDVYSKCSCIRDARYVFEGTT-NKDIVVWNSLFSGYNLQLKSE 528
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
R+ H V+ G + +V + N ++ Y + G + D+ F ++ + NLVSW+++++ + Q
Sbjct: 60 RKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQL 119
Query: 384 GHYEKALIFFSQMGLNGFDP-DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G+ EKAL++F + D + S++ AC + ++K G
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKS-GFGEDVY 178
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
T LV + ++ G+++KA + G+ + W +++
Sbjct: 179 VGTSLVVLYAKHGEIDKARLVFDGLVLKTPV-TWTAIITG 217
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 287/534 (53%), Gaps = 16/534 (2%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK- 110
V NA I + ++S AR+LFD M +++++W +I GY QN E+ +F + +
Sbjct: 252 VINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEG 311
Query: 111 ---NIVSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
++ + ++ C I R A +A E + N++I + K L EA
Sbjct: 312 WQPDVFACASILNSCGSLAAIWQGRQVHAHA-IKANLESDEYVKNSLIDMYAKCEHLTEA 370
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSD---YMSFKNVVSWTVMITGYVKNE 219
+FE + + ISY AM++G+ + G++ A + Y S K V + G ++
Sbjct: 371 RAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQ 430
Query: 220 RFCEARELFYRM---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
E + + + +++ +++I + K ++E+A+ +F + +D V +NAMI
Sbjct: 431 SAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMI 490
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
G AQN EEA++LF+ + + P++ T V++ T S L + G+Q H +I+ G +
Sbjct: 491 FGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGAD 550
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
++ V NA+I MY++CG I + L F +++ WN++I+ +AQHG E+AL F M
Sbjct: 551 SDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMM 610
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G G +P+ +TF+ +LSAC HAG V+E + F+ M Y I P +EHY +V++ R+G+
Sbjct: 611 GGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGK 670
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
L A + + MP E VW SLL+AC + NVE+G A + DP +S V++SN+
Sbjct: 671 LHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNI 730
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
YA+ G+W D ++R M GV K+ YSWIE+ +VH F+ HP D I+
Sbjct: 731 YASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIY 784
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 228/496 (45%), Gaps = 75/496 (15%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N + A S+ G++ AR+LFD+M K++++W + I+ + Q+G +++ LF +
Sbjct: 46 LFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQR 105
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ G N ++ A R A A+ G HG A R+
Sbjct: 106 AS--------GGEAPN-------EFLLASALRACAQSRAVSFGQQVHGV---AVRIGLD- 146
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
NV TA+++ + K G +D A + D + KN V+WT +ITGY + + A ELF
Sbjct: 147 --GNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFG 204
Query: 230 RM------PD-------------------------------YDKNVFVVTAMITGFCKVG 252
+M PD + + V+ A+I +CK
Sbjct: 205 KMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCS 264
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
L AR LF+ ++ ++ VS+ MIAGY QN EA+ +F + + QPD S+
Sbjct: 265 RLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILN 324
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
+C +L + +GRQ H I+ E++ V N++I MY++C + ++ F + + +S
Sbjct: 325 SCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAIS 384
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
+N +I +++ G A+ FS+M P +TF+SLL V+ S EL
Sbjct: 385 YNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLG-------VSSSQSAIELSK 437
Query: 433 KVYGIIPSS----EHY--TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+++G+I S + Y + L+D+ S+ +E A + M D +W +++ N
Sbjct: 438 QIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLM-HNRDMVIWNAMIFGLAQN 496
Query: 487 LNVELGELAAKKMREL 502
E GE A K +L
Sbjct: 497 ---EQGEEAVKLFNQL 509
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 198/397 (49%), Gaps = 16/397 (4%)
Query: 32 NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
+F +R+ V+V A I+ ++ G I AA +FD + K+ +TW A+ITGY
Sbjct: 131 SFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGY 190
Query: 92 WQNGFLQESKNLFQSMPVKNI---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERN 142
Q G + LF M + + C G ++ R + Y A+ E +
Sbjct: 191 SQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAV-ETD 249
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF 202
+ NA+I + K RL A +LF+ M RN++S+T M+ G+M+ +A A+ +S
Sbjct: 250 ASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQ 309
Query: 203 K----NVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLEN 256
+ +V + ++ + R++ + + + +V ++I + K L
Sbjct: 310 EGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTE 369
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR +FE + D +S+NAMI GY++ G A+ +FS M ++P T VS+ S+
Sbjct: 370 ARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSS 429
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
+ +Q H L++++G ++ +++I +YS+ + D++ F +H+ ++V WN +
Sbjct: 430 QSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAM 489
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I AQ+ E+A+ F+Q+ ++G P+ TF++L++
Sbjct: 490 IFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVT 526
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 176/348 (50%), Gaps = 29/348 (8%)
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
A+P+ A N ++ + K GR+ +A RLF++MP +N++S+ + + + G + A AL
Sbjct: 42 ALPDLFLA--NLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVAL 99
Query: 197 SDYMSFKNVVSWTVMITGYVKNE-------RFC-EARELFYRMPDY--------DKNVFV 240
+ +F+ G NE R C ++R + + + D NV+V
Sbjct: 100 --FAAFQRASG------GEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYV 151
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
TA+I + KVG ++ A L+F+ + K+ V++ A+I GY+Q G AL LF M +
Sbjct: 152 GTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGV 211
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+PD L S +ACSAL L GRQ+H R E + SV NA+I +Y +C + +
Sbjct: 212 RPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARK 271
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + + NLVSW T+IA + Q+ +A+ F Q+ G+ PD S+L++CG
Sbjct: 272 LFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAA 331
Query: 421 VNESMDLFELMVKVYGIIPSSEHY-TCLVDILSRAGQLEKAWQITQGM 467
+ + + +K + S E+ L+D+ ++ L +A + + +
Sbjct: 332 IWQGRQVHAHAIKAN--LESDEYVKNSLIDMYAKCEHLTEARAVFEAL 377
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+H + G ++ + N ++ YS+ G + D+ F ++ NLVSW + I+ AQHG
Sbjct: 33 AHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGC 92
Query: 386 YEKALIFFS--QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
E A+ F+ Q G P+ S L AC + V+ + + V++ G+ +
Sbjct: 93 EEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRI-GLDGNVYV 151
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFE 470
T L+++ ++ G ++ A + +P +
Sbjct: 152 GTALINLYAKVGCIDAAMLVFDALPVK 178
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/441 (34%), Positives = 261/441 (59%), Gaps = 8/441 (1%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM----SFKN 204
+I ++K L +A +F+ MP RNV+S+TAM+ + ++G +A +L M + N
Sbjct: 99 LIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPN 158
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMP--DYDKNVFVVTAMITGFCKVGMLENARLLFE 262
++ ++T + + F R++ + +Y+ +V+V ++++ + K G + AR +F+
Sbjct: 159 EFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQ 218
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ +D VS A+I+GYAQ G+ EEAL LF + + MQ + T SV TA S L L+
Sbjct: 219 CLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDH 278
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+Q H ++R+ + V + N++I MYS+CG + + F +H ++SWN ++ +++
Sbjct: 279 GKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSK 338
Query: 383 HGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLF-ELMVKVYGIIPS 440
HG + L F+ M N PD +T L++LS C H G ++ MD+F ++ + P
Sbjct: 339 HGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPD 398
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
S+HY C+VD+L RAG++E A++ + MPFE +WG LL AC ++ N+++GE ++
Sbjct: 399 SKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLL 458
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
+++P+N+ YV+LSNLYA+AG W DV +R LM ++ VTK+ SWIE+ +H F D
Sbjct: 459 QIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASD 518
Query: 561 MSHPCIDKIHLELKRASVQMK 581
SHP +++ +++ S + K
Sbjct: 519 CSHPRREEVSAKVQELSARFK 539
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 221/505 (43%), Gaps = 76/505 (15%)
Query: 4 NSYFHQTYLKRILFPPILRILSTPDSCGNFTPHSS---NCLIR------------LFSTQ 48
N + H T L+ L LR L T NF +++ CL + + T
Sbjct: 34 NIHIHDTRLREALLHMALRGLDT-----NFQDYNTVLNECLRKRAIREGQRVHAHMIKTH 88
Query: 49 Y---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQ 105
Y V++ I + + AR +FD M ++V++W A+I+ Y Q G+ ++ +LF
Sbjct: 89 YLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFV 148
Query: 106 SM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHG 157
M N ++ ++ CI + + + N + ++++ + K G
Sbjct: 149 QMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDG 208
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALSDYMSFKNVVSWTVMIT 213
++ EA +F+ +P R+V+S TA++ G+ + G ++A R L N V++T ++T
Sbjct: 209 KIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLT 268
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVV--TAMITGFCKVGMLENARLLFERIQPKDCVS 271
+++ + + +VV ++I + K G L AR +F+ + + +S
Sbjct: 269 ALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVIS 328
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
+NAM+ GY+++G E L LF+ MI + ++PD T+++V + CS L ++G +
Sbjct: 329 WNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMD----I 384
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+ +SV P+ + ++ + G E A
Sbjct: 385 FYDMTSGKISV-------------------------QPDSKHYGCVVDMLGRAGRVEAAF 419
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM-VKVYGIIP-SSEHYTCLV 448
F +M F+P + LL AC V+ ++D+ E + ++ I P ++ +Y L
Sbjct: 420 EFVKKM---PFEPSAAIWGCLLGACS----VHSNLDIGEFVGHQLLQIEPENAGNYVILS 472
Query: 449 DILSRAGQLEKAWQITQGMPFEADT 473
++ + AG+ E + M +A T
Sbjct: 473 NLYASAGRWEDVRSLRNLMLKKAVT 497
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 14/240 (5%)
Query: 290 RLFSGMIKMDMQPDDATLV---SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
RL ++ M ++ D +V C + + EG++ H +I+ + V + +I
Sbjct: 41 RLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLI 100
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
Y +C + D+ F + N+VSW +I+A++Q G+ +AL F QM +G +P+
Sbjct: 101 VFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEF 160
Query: 407 TFLSLLSAC-GHAGKV---NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
TF ++L++C G +G V + +L + + + SS L+D+ ++ G++ +A
Sbjct: 161 TFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSS-----LLDMYAKDGKIHEARG 215
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
I Q +P + + L+ E EL + RE N Y S L A +G+
Sbjct: 216 IFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYT--SVLTALSGL 273
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 287/556 (51%), Gaps = 50/556 (8%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
+S L + + +Q+ QM + N ++ + + LF +P N ++N
Sbjct: 35 LSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDLKDFNNASLLFSQIPYPNEYAFN 94
Query: 117 CMIAGCIDN-DRIDDAFDYFQAMPE----RNTATYNAMISG-----FLKHGRLEEATRLF 166
MI G + + +++ M + N TY + L HG+ + L
Sbjct: 95 IMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLK 154
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ + ++ ++ + + GE+ AR + D +S K++VSW MI+GY + +A
Sbjct: 155 SGLCADGHVRHS-LITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVG 213
Query: 227 LFYRMPD-------------------------------------YDKNVFVVTAMITGFC 249
LF M D D N FV +A+I +
Sbjct: 214 LFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYG 273
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
K G L +AR +F+R+ KD V++NAMI GYAQNGV++EA+ LFSGM + + PD TLV
Sbjct: 274 KCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVG 333
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
V +AC+++ L+ G+ G + ++ V A+I MY++CG + D+ F + N
Sbjct: 334 VLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKN 393
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNG--FDPDGITFLSLLSACGHAGKVNESMDL 427
VSWN +I+A A HG +++L F +M G P+ I+F+ +LSAC HAG V+E L
Sbjct: 394 EVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQL 453
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
F+LM +G++P EH++C+VD+L+RAG + +AW + MP + D V G+LL AC
Sbjct: 454 FDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRR 513
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
NV++ E + E++P NS Y++ S ++A W D R+R+LM+++GVTK SWI
Sbjct: 514 NVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWI 573
Query: 548 EIGNKVHYFLGGDMSH 563
EI N+VH F GD+ H
Sbjct: 574 EIENQVHEFHAGDVLH 589
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 191/400 (47%), Gaps = 51/400 (12%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V ++ I+ SR G++ AR++FD+++ KD+++WN++I+GY + G+ ++ LF M
Sbjct: 163 VRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAG 222
Query: 112 I----VSWNCMIAGCIDNDRID-----DAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
++ ++ C D + + F M + N+ +A+I + K G L A
Sbjct: 223 FEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEM-DLNSFVGSALIGMYGKCGDLSSA 281
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
R+F++M +++V+++ AM+ G+ + G D+A L M V + + G +
Sbjct: 282 RRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASI 341
Query: 223 EARELFYRMPDY------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
A + + Y +++V TA+I + K G L++A +FE + K+ VS+NAMI
Sbjct: 342 GALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMI 401
Query: 277 AGYAQNGVAEEALRLFSGMIKMD--MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+ A +G +E+L LF M K ++P+D + + V +AC L++EGRQ
Sbjct: 402 SALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQ--------- 452
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ + S G++ P + + ++ A+ GH +A F
Sbjct: 453 ----------LFDLMSSSFGLV-----------PKIEHHSCMVDLLARAGHVHEAWDFIE 491
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+M PD + +LL AC V+ S + +++++
Sbjct: 492 KMPEK---PDEVVLGALLGACQKRRNVDVSERVMHMLLEM 528
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 124/288 (43%), Gaps = 57/288 (19%)
Query: 18 PPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRAGKISAARQL 72
P + ++S +CG+ I F + FV +A I + G +S+AR++
Sbjct: 225 PDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRV 284
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI---------VSWNCMIAGCI 123
FD+M KDV+TWNA+ITGY QNG E+ LF M + V C G +
Sbjct: 285 FDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGAL 344
Query: 124 D---------------ND---------------RIDDAFDYFQAMPERNTATYNAMISGF 153
D ND +DDA F+ MP++N ++NAMIS
Sbjct: 345 DFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISAL 404
Query: 154 LKHGRLEEATRLFEQMP------RRNVISYTAMLDGFMKKGEVDKARALSDYMS-----F 202
HGR +E+ LF++M R N IS+ +L + G VD+ R L D MS
Sbjct: 405 AFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLV 464
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCK 250
+ + M+ + EA + +MP +K VV + G C+
Sbjct: 465 PKIEHHSCMVDLLARAGHVHEAWDFIEKMP--EKPDEVVLGALLGACQ 510
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ A I ++ G + A ++F+ M K+ ++WNA+I+ +G QES +LF+ M
Sbjct: 363 IYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSK 422
Query: 110 K------NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGR 158
+ N +S+ +++ C+ +D+ F M ++ M+ + G
Sbjct: 423 EGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGH 482
Query: 159 LEEATRLFEQMPRR-NVISYTAMLDGFMKKGEVD 191
+ EA E+MP + + + A+L K+ VD
Sbjct: 483 VHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVD 516
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 290/537 (54%), Gaps = 25/537 (4%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMI 119
G+I AR++FD+ V WNAII GY + F ++ ++ M + + C++
Sbjct: 117 GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVL 176
Query: 120 AGCID------NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
C R+ F+ E + N +++ + K GR+E+A +FE + RN
Sbjct: 177 KACSGVPVLEVGKRVHGQI--FRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRN 234
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNV-VSWTVMIT---GYVKNERFCEAREL-- 227
++S+T+M+ G+ + G +A + M +NV W +++ Y E + + +
Sbjct: 235 IVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHG 294
Query: 228 -FYRMP-DYDKNVFV-VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+M +++ ++ + +TAM + K G + AR F++++ + + +NAMI+GYA+NG
Sbjct: 295 CVVKMGLEFEPDLLISLTAM---YAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGY 351
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EA+ LF MI +++ D T+ S AC+ + L+ + + + + +V V A
Sbjct: 352 TNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTA 411
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+I M+++CG + + F + ++V W+ +I + HG + A+ F M G P+
Sbjct: 412 LIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPN 471
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+TF+ LL+AC H+G V E +LF M K YGI +HY C+VD+L R+G L +A+
Sbjct: 472 DVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFI 530
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
MP E VWG+LL AC I +V LGE AA+++ LDP N+ YV LSNLYA++ +W
Sbjct: 531 TTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWD 590
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
V +VR+LM+E+G++K YS IEI K+ F GD SHP +I EL+ ++K
Sbjct: 591 SVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLK 647
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
F+VT + +G + AR +F+ +NA+I GY+ + +A+ ++S M
Sbjct: 104 FLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQAS 163
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ PD TL V ACS + +L G++ H + R GFE++V V N ++ +Y++CG + +
Sbjct: 164 GVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQA 223
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+ F + N+VSW ++I+ + Q+G +AL F QM PD I +S+L A
Sbjct: 224 RIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDV 283
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
+ + + +VK+ G+ + L + ++ GQ+
Sbjct: 284 EDLEQGKSIHGCVVKM-GLEFEPDLLISLTAMYAKCGQV 321
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 166/393 (42%), Gaps = 81/393 (20%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+ RL VFV N ++ ++ G++ AR +F+ + +++++W ++I+GY QNG E+
Sbjct: 195 IFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEA 254
Query: 101 KNLFQSMPVKNI-VSWNCMIA------------------GCIDN---------------- 125
+F M +N+ W +++ GC+
Sbjct: 255 LRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAM 314
Query: 126 ----DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISY 177
++ A +F M N +NAMISG+ K+G EA LF++M +N+ I+
Sbjct: 315 YAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITV 374
Query: 178 TAMLDGFMKKGEVDKARALSDYMS---FKN-VVSWTVMITGYVKNERFCEARELFYRMPD 233
+ + + G +D A+ + DY++ ++N V T +I + K ARE+F R
Sbjct: 375 RSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRT-- 432
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
DK+V V +AMI GY +G ++A+ LF
Sbjct: 433 LDKDVVVWSAMIV-------------------------------GYGLHGRGQDAIDLFY 461
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + P+D T V + TAC+ L+ EG + + G EA V+ + R G
Sbjct: 462 AMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSG 521
Query: 354 GILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+ ++ + P + W ++ A + H
Sbjct: 522 HLNEAYDFITTMPIEPGVSVWGALLGACKIYRH 554
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H ++ +G + + + G I + F + P++ WN II ++ H
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII----PS 440
+ A+ +S+M +G +PDG T +L AC + + E+ +V+G I
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKAC-------SGVPVLEVGKRVHGQIFRLGFE 201
Query: 441 SEHYT--CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
S+ + LV + ++ G++E+A + +G+ + + W S+++
Sbjct: 202 SDVFVQNGLVALYAKCGRVEQARIVFEGLD-DRNIVSWTSMISG 244
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 249/448 (55%), Gaps = 37/448 (8%)
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
+ ++ +++ + K G+ D AR + D MS ++++SW MI GY N EA +LF RM
Sbjct: 90 DTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMH 149
Query: 233 D-------------------------------------YDKNVFVVTAMITGFCKVGMLE 255
D + FV TA + + K M++
Sbjct: 150 REGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIK 209
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+A +FE + K V+++++ AG+ QNG+ EE L LF + MQ + T+ S+ + C+
Sbjct: 210 DACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCA 269
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
+L L+ EG Q H +++++GF N+ V +++ +Y++CG I S F + N+V WN
Sbjct: 270 SLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNA 329
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+IA+F++H H +A+I F +M G P+ +T+LS+LSAC H G V E F L++
Sbjct: 330 MIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDR 389
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
P+ HY+C+VD+L R+G+ ++AW++ MPFE +WGSLL + I+ N+ L +A
Sbjct: 390 TAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIA 449
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
A+++ L+P+N +V+LSN+YAA+G W +V R +++ G K+ SWIE K+H
Sbjct: 450 AEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHV 509
Query: 556 FLGGDMSHPCIDKIHLELKRASVQMKSV 583
F+ G+ HP I ++ +L+ +M+ +
Sbjct: 510 FVAGEREHPGITDVYNKLEEIYHEMRKI 537
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 163/369 (44%), Gaps = 57/369 (15%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D +T N +I Y + G ++ +F +M V++I+SWN MIAG N +A F M
Sbjct: 90 DTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMH 149
Query: 140 ERNT---------------ATY------------------------NAMISGFLKHGRLE 160
T A Y A + + K ++
Sbjct: 150 REGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIK 209
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+A +FE MP + ++++++ GF++ G ++ L F++ + +T + +
Sbjct: 210 DACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCL-----FQSTQREGMQLTEFTVSSI 264
Query: 221 F--CEARELFYRMPD---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
C + L + +N+FV T+++ + K G +E + +F ++ K+
Sbjct: 265 LSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNV 324
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V +NAMIA ++++ + EA+ LF M ++ + P++ T +S+ +ACS L+ EGR L
Sbjct: 325 VLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNL 384
Query: 330 VIRN-GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
++ + E NV + ++ + R G ++ +L + P W +++ + H +
Sbjct: 385 LLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIR 444
Query: 388 KALIFFSQM 396
A I Q+
Sbjct: 445 LARIAAEQL 453
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 134/334 (40%), Gaps = 88/334 (26%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK--- 110
N I+ ++ G+ AR++FD M+ + +I+WN +I GY N E+ LF M +
Sbjct: 95 NILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQ 154
Query: 111 ----NIVSWNCMIAG-----------------CIDN---------------DRIDDAFDY 134
+ S C A +D+ + I DA
Sbjct: 155 MTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWV 214
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR----------------------- 171
F+ MPE+ + T++++ +GF+++G EE LF+ R
Sbjct: 215 FENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALI 274
Query: 172 ----------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
RN+ T+++D + K G+++K+ + M KNVV W MI +
Sbjct: 275 IEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASF 334
Query: 216 VKNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENAR-----LLFERIQPKD 268
++ EA LF +M N ++++ G++E R LL +R +
Sbjct: 335 SRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPN 394
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
+ ++ M+ ++G +EA +L KM +P
Sbjct: 395 VLHYSCMVDVLGRSGKTDEAWKLLD---KMPFEP 425
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 307 LVSVFTACSALQLLNE------GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
L+ VFT LQL + G+ H L I G + CN +I +Y++CG +
Sbjct: 53 LIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARR 112
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + +++SWNT+IA + + +AL FS+M G T S L AC
Sbjct: 113 VFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYA 172
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ E L + +K+ + SS T +D+ ++ ++ A + + MP E + W SL
Sbjct: 173 IIECKQLHTIAIKL-ALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP-EKTSVTWSSLF 230
Query: 481 AACVIN 486
A V N
Sbjct: 231 AGFVQN 236
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 48/239 (20%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+L FV A + ++ I A +F+ M K +TW+++ G+ QNG +E
Sbjct: 184 IKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVL 243
Query: 102 NLFQS----------MPVKNIVSWNCMIAGCIDND------------------------- 126
LFQS V +I+S +A I+
Sbjct: 244 CLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVY 303
Query: 127 ----RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYT 178
+I+ +++ F M E+N +NAMI+ F +H EA LFE+M + N ++Y
Sbjct: 304 AKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYL 363
Query: 179 AMLDGFMKKGEVDKARA-----LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
++L G V++ R LSD + NV+ ++ M+ ++ + EA +L +MP
Sbjct: 364 SILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMP 422
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 268/472 (56%), Gaps = 28/472 (5%)
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKAR 194
F+ + T +++I+ + + G + A ++F+++P R+ +S+ +M+ G+ K G +A
Sbjct: 149 FKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAV 208
Query: 195 AL-----------SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTA 243
+ D MS +++ G + + E F N ++ +A
Sbjct: 209 EVFREMGRRDGFEPDEMSLVSLLG----ACGELGDLELGRWVEGFVVERGMTLNSYIGSA 264
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD 303
+I+ + K G LE+AR +F+ + +D +++NA+I+GYAQNG+A+EA+ LF GM + + +
Sbjct: 265 LISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTAN 324
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
TL +V +AC+ + L+ G+Q + GF+ ++ V A+I MY++ G + +++ F+
Sbjct: 325 KITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFK 384
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG--LNGFDPDGITFLSLLSACGHAGKV 421
+ N SWN +I+A A HG ++AL F M G P+ ITF+ LLSAC HAG V
Sbjct: 385 DMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLV 444
Query: 422 NESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+E LF++M ++G++P EHY+C+VD+L+RAG L +AW + + MP + D G+LL
Sbjct: 445 DEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLG 504
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC NV++GE + + E+DP NS Y++ S +YA MW D R+RLLM+++G+TK
Sbjct: 505 ACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKT 564
Query: 542 CAYSWIEIGNKVHYFLGGDMSHPCIDKIHL---------ELKRASVQMKSVD 584
SWIE+ N +H F GD C+D I L ELKR K V+
Sbjct: 565 PGCSWIEVENHLHEFHAGD--GLCLDSIDLSNIIDLLYEELKREGYVPKVVE 614
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 148/266 (55%), Gaps = 12/266 (4%)
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
C A L +++ + + ++IT + + G++ +AR +F+ I +D VS+N+MIAGYA+
Sbjct: 142 CAAHSLLFKLALH-SDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAK 200
Query: 282 NGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
G A EA+ +F M + D +PD+ +LVS+ AC L L GR V+ G N
Sbjct: 201 AGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSY 260
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
+ +A+I+MY++CG + + F + + ++++WN +I+ +AQ+G ++A++ F M +
Sbjct: 261 IGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDC 320
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH----YTCLVDILSRAGQ 456
+ IT ++LSAC G ++ + E Y +H T L+D+ +++G
Sbjct: 321 VTANKITLTAVLSACATIGALDLGKQIDE-----YASQRGFQHDIFVATALIDMYAKSGS 375
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAA 482
L+ A ++ + MP + + W ++++A
Sbjct: 376 LDNAQRVFKDMP-QKNEASWNAMISA 400
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 132/295 (44%), Gaps = 56/295 (18%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
++ +A IS ++ G++ +AR++FD M +DVITWNA+I+GY QNG E+ LF M
Sbjct: 260 YIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKED 319
Query: 109 --VKNIVSWNCMIAGC-----------ID------------------------NDRIDDA 131
N ++ +++ C ID + +D+A
Sbjct: 320 CVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNA 379
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRRNVISYTAMLDGFM 185
F+ MP++N A++NAMIS HG+ +EA LF+ M R N I++ +L +
Sbjct: 380 QRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACV 439
Query: 186 KKGEVDKARALSDYMS-----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFV 240
G VD+ L D MS + ++ M+ + EA +L +MP +K V
Sbjct: 440 HAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMP--EKPDKV 497
Query: 241 VTAMITGFCK----VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
+ G C+ V + E + + P + ++ YA + E++ R+
Sbjct: 498 TLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARM 552
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 5/248 (2%)
Query: 257 ARLLFERIQPK-DCVSFNAMIAGYAQN-GVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ LLF I P + +FN MI AL LF M+ + + PD+ T F +C
Sbjct: 73 SSLLFSHIAPHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSC 132
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ L L+ +H L+ + ++ +++IT Y+RCG + + F +I + VSWN
Sbjct: 133 ANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWN 192
Query: 375 TIIAAFAQHGHYEKALIFFSQMG-LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
++IA +A+ G +A+ F +MG +GF+PD ++ +SLL ACG G + E E V
Sbjct: 193 SMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDL-ELGRWVEGFVV 251
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
G+ +S + L+ + ++ G+LE A +I GM D W ++++ N +
Sbjct: 252 ERGMTLNSYIGSALISMYAKCGELESARRIFDGMAAR-DVITWNAVISGYAQNGMADEAI 310
Query: 494 LAAKKMRE 501
L M+E
Sbjct: 311 LLFHGMKE 318
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/550 (30%), Positives = 295/550 (53%), Gaps = 17/550 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV + IS SR+G A ++F+ + KD+ N +I Y + G+ + + +F +
Sbjct: 45 VFVGTSLISMYSRSGNFDEAEKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLIS 104
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATR 164
+ + I +++ + + T+ NA+I+ + K+G +EEA R
Sbjct: 105 VGLDPNDYTFTNIISTCNVEEG-KQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAAR 163
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN--VVSWTVMITGYVKNERFC 222
+F M ++N+IS+TA++ G+ + G +KA + ++ + V + ++ + C
Sbjct: 164 MFSVMNKKNLISWTALISGYTRNGYGEKA--VDGFLELRGCGVECDSGLLATILDGCSEC 221
Query: 223 EARELFYRMPD------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
+ +L ++ Y ++ + TA+I + K ++AR +F + P+ SFNA++
Sbjct: 222 KNLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAIL 281
Query: 277 AGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
G+ +N EE +F +++ ++PD + + + + L +GR H I+ GF
Sbjct: 282 VGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGF 341
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
++SV NA+ITMY++CG + D+ AF + + + +SWN II+A++ HG EKAL+ + +
Sbjct: 342 AGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQE 401
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M GF PD IT L +L AC ++G + + LF M YGI P EHY C+VD+L RAG
Sbjct: 402 MEEKGFTPDEITILVILQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAG 461
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
L +A I PF T +W +L+ C + ++ LG+LA+K + +L P + YV++SN
Sbjct: 462 YLSQAMDIINRSPFSESTLLWRTLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYVLVSN 521
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
+YA GM + ++VR MK+ ++K+ SW+EI N VHYF+ HP +I+ L
Sbjct: 522 IYAGEGMIDEASKVRTTMKDLKLSKEAGSSWVEIDNMVHYFVASGTDHPESIEIYARLDL 581
Query: 576 ASVQMKSVDD 585
+M+ + D
Sbjct: 582 LRNEMRGIYD 591
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 173/379 (45%), Gaps = 7/379 (1%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E N ++IS + + G +EA ++F + +++ M+ + K G +A + Y
Sbjct: 42 EENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIY 101
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK--NVFVVTAMITGFCKVGMLENA 257
+ + T + E ++L Y V A+IT + K GM+E A
Sbjct: 102 LISVGLDPNDYTFTNIISTCNVEEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEA 161
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSAL 317
+F + K+ +S+ A+I+GY +NG E+A+ F + ++ D L ++ CS
Sbjct: 162 ARMFSVMNKKNLISWTALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSEC 221
Query: 318 QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTII 377
+ L+ G Q H LVI+ G+ ++++ A+I +Y++C + F + + S+N I+
Sbjct: 222 KNLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAIL 281
Query: 378 AAFAQH-GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
F ++ + E ++F SQ+ L G PD ++F LLS + + + L +K G
Sbjct: 282 VGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKT-G 340
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
L+ + ++ G +E A+Q M D W ++++A ++ E L
Sbjct: 341 FAGHISVSNALITMYAKCGIVEDAYQAFNSMSAN-DCISWNAIISAYSLHGQGEKALLLY 399
Query: 497 KKMRE--LDPQNSAVYVML 513
++M E P + V+L
Sbjct: 400 QEMEEKGFTPDEITILVIL 418
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 121/234 (51%), Gaps = 5/234 (2%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+++NVFV T++I+ + + G + A +F + KD N MI Y + G + A+ +F
Sbjct: 41 FEENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFI 100
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
+I + + P+D T ++ + C+ + EG+Q H L ++ G SV NAVITMY + G
Sbjct: 101 YLISVGLDPNDYTFTNIISTCN----VEEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNG 156
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ ++ F ++ NL+SW +I+ + ++G+ EKA+ F ++ G + D ++L
Sbjct: 157 MVEEAARMFSVMNKKNLISWTALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILD 216
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
C ++ + L++K+ G T L+D+ ++ + A + G+
Sbjct: 217 GCSECKNLDLGTQIHGLVIKL-GYPCDINIGTALIDLYAKCKNFQSARTVFNGL 269
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 5/169 (2%)
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + + ++ T V + ACS + + G Q H VI++GFE NV V ++I+MYSR G
Sbjct: 1 MCEFGEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGN 60
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
++E F + +L N +I + + G+ ++A+ F + G DP+ TF +++S
Sbjct: 61 FDEAEKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIIST 120
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
C V E L L VK YG++ + ++ + + G +E+A ++
Sbjct: 121 C----NVEEGKQLHGLAVK-YGVLLQTSVGNAVITMYGKNGMVEEAARM 164
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
++ V+NA I+ ++ G + A Q F+ M+ D I+WNAII+ Y +G +++ L+Q M
Sbjct: 344 HISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEME 403
Query: 109 VKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRL 159
K ++ ++ C + +D F M + Y M+ + G L
Sbjct: 404 EKGFTPDEITILVILQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYL 463
Query: 160 EEATRLFEQMP 170
+A + + P
Sbjct: 464 SQAMDIINRSP 474
>gi|296088921|emb|CBI38481.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 249/439 (56%), Gaps = 3/439 (0%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK-N 204
++ + L+ + E + F+ P RN L G G V +A L +
Sbjct: 31 FSGKTTTLLRRIQSETSNGSFQVQPPRNSFHLDETLKGLCFSGRVMEAVGLLCRTGLQVE 90
Query: 205 VVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
++ +++ + + F R + +M Y + ++ T ++ K G L+ + +LF+
Sbjct: 91 PATYALLLQECIFKKEFKTGRRIHAQMIVVGYYPDEYLKTKLLILHAKTGDLDTSHILFD 150
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ K +S+NAMIAGY Q G+ EE L L+ M + + PD T SVF AC+ L L +
Sbjct: 151 DLSKKSLISWNAMIAGYVQKGLEEEGLNLYDEMRQSGLTPDQYTFASVFRACATLATLEK 210
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+Q+H ++I++ + NV V +A++ MY +C + D F + + N+++W +I+ + Q
Sbjct: 211 GKQAHCVMIKSQIKENVVVNSALMDMYFKCSSLYDGHRVFNKSLNRNVITWTALISGYGQ 270
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG + L+FFS+M GF P+ +TFL+++SAC H G VNE + F M + YGI P +
Sbjct: 271 HGRVAEVLVFFSKMKTEGFRPNYVTFLAVISACSHGGLVNEGWEYFMSMTRDYGIQPRGQ 330
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HY +VD+L RAG+L +A++ Q P + +WG+LL AC ++ N+++ AAKK +L
Sbjct: 331 HYAAMVDLLGRAGRLHEAFEFVQNSPCGEHSVIWGALLGACRVHGNIDMLRFAAKKYFDL 390
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P+N+ YV+LSN YA G+W +V VR +M+E G+ K YS IE+ +VH+FL GD S
Sbjct: 391 EPENAGKYVVLSNAYATFGLWDNVAEVRGVMRESGMRKDPGYSRIEVQREVHFFLMGDKS 450
Query: 563 HPCIDKIHLELKRASVQMK 581
H ++I+ +K + +K
Sbjct: 451 HKQTEQIYEVIKEVTCILK 469
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 24/264 (9%)
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV----SWN 116
++ G + + LFD ++ K +I+WNA+I GY Q G +E NL+ M + ++
Sbjct: 137 AKTGDLDTSHILFDDLSKKSLISWNAMIAGYVQKGLEEEGLNLYDEMRQSGLTPDQYTFA 196
Query: 117 CMIAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
+ C ++ ++ + N +A++ + K L + R+F + R
Sbjct: 197 SVFRACATLATLEKGKQAHCVMIKSQIKENVVVNSALMDMYFKCSSLYDGHRVFNKSLNR 256
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNERFCEARELF 228
NVI++TA++ G+ + G V + M + N V++ +I+ E E F
Sbjct: 257 NVITWTALISGYGQHGRVAEVLVFFSKMKTEGFRPNYVTFLAVISACSHGGLVNEGWEYF 316
Query: 229 YRMP-DY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC----VSFNAMIAGYAQ 281
M DY AM+ + G L A FE +Q C V + A++
Sbjct: 317 MSMTRDYGIQPRGQHYAAMVDLLGRAGRLHEA---FEFVQNSPCGEHSVIWGALLGACRV 373
Query: 282 NGVAEEALRLFSGMIKMDMQPDDA 305
+G + LR F+ D++P++A
Sbjct: 374 HGNI-DMLR-FAAKKYFDLEPENA 395
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V VN+A + + + ++F++ ++VITW A+I+GY Q+G + E F M
Sbjct: 227 VVVNSALMDMYFKCSSLYDGHRVFNKSLNRNVITWTALISGYGQHGRVAEVLVFFSKMKT 286
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLE 160
+ N V++ +I+ C +++ ++YF +M + Y AM+ + GRL
Sbjct: 287 EGFRPNYVTFLAVISACSHGGLVNEGWEYFMSMTRDYGIQPRGQHYAAMVDLLGRAGRLH 346
Query: 161 EATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKAR-ALSDYMSF--KNVVSWTVMITGY 215
EA + P + + + A+L G +D R A Y +N + V+ Y
Sbjct: 347 EAFEFVQNSPCGEHSVIWGALLGACRVHGNIDMLRFAAKKYFDLEPENAGKYVVLSNAY 405
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/564 (31%), Positives = 308/564 (54%), Gaps = 39/564 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
FV + ++ ++ G + AR++FD M ++V+ W ++ G+ QN + + ++FQ M
Sbjct: 103 FVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYA 162
Query: 108 -PVKNIVSWNCMIAGC--IDNDRIDDAFDYF--QAMPERNTATYNAMISGFLKHGRLEEA 162
++ + + ++ C + + ++ D F + + + + + +A+ S + K GRLE+A
Sbjct: 163 GSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDA 222
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+ F ++ +NVIS+T+ + G K L M ++ +T + + C
Sbjct: 223 LKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSAL--SQCC 280
Query: 223 EAREL-----FYRMP---DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
E L Y + Y+ N+ V +++ + K G + A LF R+ V++NA
Sbjct: 281 EILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNA 340
Query: 275 MIAGYAQ-------NGVA----EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
MIAG+AQ N A EAL+LFS + M+PD TL SV + CS + + +G
Sbjct: 341 MIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQG 400
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
Q H I+ GF ++V V ++I+MYS+CG I + AF ++ + +++W ++I F+QH
Sbjct: 401 EQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQH 460
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G ++AL F M L G P+ +TF+ +LSAC HAG V+++++ FE+M K Y I P+ +H
Sbjct: 461 GMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDH 520
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y C+VD+ R G+LE+A + M +E +W + +A C + N+ELG AA+++ L
Sbjct: 521 YECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLK 580
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P++ YV+L N+Y +A + DV+RVR +M+E+ V K +SWI I +KV+ F +H
Sbjct: 581 PKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVYSFKTNGKTH 640
Query: 564 PCIDKIHLELKRASVQMKSVDDFV 587
P ++S+ KS++D +
Sbjct: 641 P----------QSSLICKSLEDLL 654
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 161/338 (47%), Gaps = 53/338 (15%)
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM- 231
N + +++ + K G ++ AR + D M +NVV+WT ++ G+V+N + A +F M
Sbjct: 101 NFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEML 160
Query: 232 --------------------------------------PDYDKNVFVVTAMITGFCKVGM 253
D+D + V +A+ + + K G
Sbjct: 161 YAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDAS--VGSALCSLYSKCGR 218
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
LE+A F RI+ K+ +S+ + ++ A NG + LRLF MI +D++P++ TL S +
Sbjct: 219 LEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQ 278
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C + L G Q + L I+ G+E+N+ V N+++ +Y + G I+++ F ++ ++V+W
Sbjct: 279 CCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTW 338
Query: 374 NTIIAAFAQHGHYEK-----------ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
N +IA AQ K AL FS++ L+G PD T S+LS C +
Sbjct: 339 NAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIE 398
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+ + +K G + T L+ + S+ G +E+A
Sbjct: 399 QGEQIHAQTIKT-GFLSDVIVSTSLISMYSKCGSIERA 435
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 127/246 (51%), Gaps = 2/246 (0%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N FV++ ++ + K G +E+AR +F+ + ++ V++ ++ G+ QN + A+ +F M+
Sbjct: 101 NFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEML 160
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
P TL +V ACS+LQ L G Q H +I+ + + SV +A+ ++YS+CG +
Sbjct: 161 YAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLE 220
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F +I N++SW + ++A A +G K L F +M P+ T S LS C
Sbjct: 221 DALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCC 280
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
+ ++ L +K +G + L+ + ++G + +A ++ M +A W
Sbjct: 281 EILSLELGTQVYSLCIK-FGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMD-DASMVTW 338
Query: 477 GSLLAA 482
+++A
Sbjct: 339 NAMIAG 344
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V+ + IS S+ G I A + F +M+T+ +I W ++ITG+ Q+G Q++ ++F+ M +
Sbjct: 416 VIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSL 475
Query: 110 ----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLE 160
N V++ +++ C + A +YF+ M ++ Y M+ F++ GRLE
Sbjct: 476 AGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLE 535
Query: 161 EATRLFEQM 169
+A ++M
Sbjct: 536 QALNFIKKM 544
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
V + C + +E + H V++ G N V + ++ +Y++CG + D+ F +
Sbjct: 71 VPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLR 130
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N+V+W T++ F Q+ + A+ F +M G P T ++L AC + D
Sbjct: 131 RNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLG-DQ 189
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
F + Y + + + L + S+ G+LE A + T E + W S ++AC N
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALK-TFSRIREKNVISWTSAVSACADN 247
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/546 (30%), Positives = 292/546 (53%), Gaps = 19/546 (3%)
Query: 57 ISALSRAGKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
I + +R G ++ R++ M DV N ++ Y + G L+E++ +F++ P KN+
Sbjct: 41 IQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNV 100
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQ 168
SW +I C + R +A F M ++ ++ ++ A I+ A R
Sbjct: 101 FSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHA 160
Query: 169 MPRR-----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+ RR V++ T+++ + K G ++++ + M+ N VSW MI + ++ R E
Sbjct: 161 LLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLE 220
Query: 224 A----RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
A +++F +V V T ++ + K L +A F ++Q + +++N +I+ Y
Sbjct: 221 ALRTLQKMFLEGIRACSDVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAY 280
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN- 338
Q+ +EA+ LF M+ + ++ D+ T +++ AC L +GR H V + +N
Sbjct: 281 VQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLASNH 340
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+ N ++ MY +CG + D+E F+ + P++++WNT+IAA+ QHGH +AL F+ M
Sbjct: 341 APLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQE 400
Query: 399 NGFDPDGITFLSLLSA-CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
G PD T++S++ A C +AG E+ F M + +G+ P HY C+V+ L +AG+L
Sbjct: 401 EGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRL 460
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
A + Q MPFE D W S LA C + +++ G+LAAK +DP+ S YV L+ ++
Sbjct: 461 SDAETLIQCMPFEPDVLTWTSFLANCRSHGDMKRGKLAAKGAIRIDPEASTGYVALARIH 520
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
A AG +++ +R+R LM ++G+ K S I++G V+ F GD S+P +I ELKR
Sbjct: 521 ADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLD 580
Query: 578 VQMKSV 583
+MKS
Sbjct: 581 KEMKSA 586
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 196/471 (41%), Gaps = 90/471 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V+N + + G + AR +F+ K+V +W +IT Q+G QE+ LF M
Sbjct: 69 VYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLK 128
Query: 110 KNI----VSWNCMIAGCIDNDR------------------------------------ID 129
+ I VS+ I C ++
Sbjct: 129 QGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLE 188
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM------PRRNVISYTAMLDG 183
++ F++M E N ++NAMI+ F +H R EA R ++M +V+ T +++
Sbjct: 189 ESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSDVVVGTTLVNM 248
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------ 231
+ K + A A + N+++W V+I+ YV++ F EA ELF RM
Sbjct: 249 YAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTF 308
Query: 232 --------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
P + + ++ + K G L++A +F+ +
Sbjct: 309 INILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMS 368
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
D +++N MIA Y Q+G EALR + M + + PDD T VSV A A L E
Sbjct: 369 QPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAGLPEEAH 428
Query: 326 SHVLVIR--NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQ 382
++ + ++ +G ++ + G + D+E + + P++++W + +A
Sbjct: 429 AYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCRS 488
Query: 383 HGHYEKALIFFSQMGLNGFDPDGIT-FLSLLSACGHAGKVNESMDLFELMV 432
HG ++ + + G DP+ T +++L AG E+ + +LM+
Sbjct: 489 HGDMKRGKL--AAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLML 537
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
V V +C+ L L EGR+ H L+ R G ++V V N ++ MY +CG + ++ L F +
Sbjct: 38 VRVIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N+ SW +I AQHG ++AL F +M G P ++F + ++AC + +
Sbjct: 98 KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA 157
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+++ YG + T LV + S+ G LE++ + + M E + W +++AA
Sbjct: 158 LHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMT-EPNAVSWNAMIAA 211
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/559 (30%), Positives = 289/559 (51%), Gaps = 19/559 (3%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
V N + + G + A +FD + +V +W II Y QNG E L M
Sbjct: 153 MVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQA 212
Query: 111 NI---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ V C G ++ +I A +R+ A A+I+ + K G LEE
Sbjct: 213 GVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEE 272
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVK 217
A +F Q+ ++++S+++M+ F + G+ A L M + V V++ ++
Sbjct: 273 AFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTS 332
Query: 218 NERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ F +E+ R+ Y +V + +A++ +C G +E AR +FE + +D VS+++M
Sbjct: 333 LKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSM 392
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IAGY+QN AL LF M +QP+ T VS AC+ + L G Q H V G
Sbjct: 393 IAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGL 452
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ +V V A++ +Y +CG + ++E F + NL++W +I A+ Q+GH ++L
Sbjct: 453 DKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHG 512
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M L G PDGI F+++L +C +AG++++ + + LM + +GI P+ EH C+VDIL RAG
Sbjct: 513 MELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAG 572
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+LE A Q+ M FE+ W LL AC + + AA+K+ +L+P+N+ YV+LS+
Sbjct: 573 KLEAAEQLINTMKFESSL-AWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSS 631
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD--MSHPCIDKIHLEL 573
++ AAG W R M +GV + S IEIG++VH F+ + H + +I L
Sbjct: 632 VFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAAL 691
Query: 574 KRASVQMKSVDDFVEIATS 592
++ +M+ +V AT+
Sbjct: 692 EKLGREMQGA-GYVPDATA 709
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 211/438 (48%), Gaps = 27/438 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+ N I R G A +FD+M ++V+ W ++I+ + G ++ LF+ M +
Sbjct: 51 LLENIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLS 110
Query: 111 NI-----------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+ + W+ + R+ Q E + N ++ + K G +
Sbjct: 111 GVSPDRITFTSILLKWSGRERNLDEGKRVHSHI--MQTGYEGDRMVMNLVVEMYGKCGDV 168
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGE----------VDKARALSDYMSFKNVVSWT 209
E+A +F+ + NV S+T ++ + + G +++A D +F V+
Sbjct: 169 EQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGAC 228
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
+ G ++ + A + D++ V TA+I + K G LE A +F +I KD
Sbjct: 229 TAV-GALEEAKILHAATI--SSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDI 285
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+++MIA +AQ+G A+ A++L M ++P++ T V+V A ++L+ G++ H
Sbjct: 286 VSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHAR 345
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+++ G+ +V + +A++ MY G + + F ++VSW+++IA ++Q+ +A
Sbjct: 346 IVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARA 405
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F +M ++G P+ +TF+S + AC G + L E V+ G+ T LV+
Sbjct: 406 LSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHE-RVRCLGLDKDVPVATALVN 464
Query: 450 ILSRAGQLEKAWQITQGM 467
+ + G+LE+A + GM
Sbjct: 465 LYGKCGRLEEAEAVFLGM 482
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 198/412 (48%), Gaps = 29/412 (7%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV- 205
N +I +L+ G + A +F++M +NV+++T+++ F G A L M V
Sbjct: 54 NIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVS 113
Query: 206 ---VSWTVMITGYVKNER-FCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARL 259
+++T ++ + ER E + + + Y+ + V+ ++ + K G +E A
Sbjct: 114 PDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGN 173
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F+ IQ + S+ +IA YAQNG E LRL S M + ++PD T +V AC+A+
Sbjct: 174 VFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGA 233
Query: 320 LNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L E + H I + G + + +V A+I +Y +CG + ++ F QI + ++VSW+++IA
Sbjct: 234 LEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIA 293
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
AFAQ G + A+ M L G P+ +TF+++L A S+ F+ +++ I
Sbjct: 294 AFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAV-------TSLKAFQYGKEIHARI 346
Query: 439 PSSEHY--TCLVDILSRA----GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
+ + CL L + G +E A I + E D W S++A N E
Sbjct: 347 VQAGYSDDVCLTSALVKMYCNWGWVETARSIFES-SRERDVVSWSSMIAGYSQN---ESP 402
Query: 493 ELAAKKMRELD----PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
A RE++ NS +V + A G R T++ ++ G+ K
Sbjct: 403 ARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDK 454
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS-----VCNAVITMY 349
M ++Q + + ++ TACS L+ L EG++ H LV+R + + N VI MY
Sbjct: 1 MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
RCG + F ++ N+V+W ++I+AF GH+ A++ F +M L+G PD ITF
Sbjct: 61 LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120
Query: 410 SLL 412
S+L
Sbjct: 121 SIL 123
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/622 (28%), Positives = 300/622 (48%), Gaps = 109/622 (17%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F + +S +AG I++AR+LF M K V+++ ++ + G ++++ L++ P+
Sbjct: 150 FTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLH 209
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAM------P------------------------- 139
++ + MI+G + N+ DAF F+ M P
Sbjct: 210 SVAFFTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVV 269
Query: 140 ---------ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
E++ +N++I+ +L+ G A R+F+ M R+V+S+TA+LD + G++
Sbjct: 270 GLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDL 329
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY---------- 234
AR + D M +N VSW +I + + EA +L+ +M P+
Sbjct: 330 YGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSAC 389
Query: 235 ---------------------DKNVFVVTAMITGFCKV---------------------- 251
N+FV +++I +CK
Sbjct: 390 ATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWN 449
Query: 252 ---------GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
G + A LF ++ ++ VS+N MI+GYA+N +AL F M+ P
Sbjct: 450 SLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIP 509
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
+ TL SV AC+ L L GR H +++ G E N+ + A+ MY++ G + S F
Sbjct: 510 GEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVF 569
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
Q+ N ++W ++ A++G E+++ F M NG P+ TFL++L AC H G V
Sbjct: 570 YQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVE 629
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+++ FE M + +GI P S+HYTC+VD+L+RAG L +A ++ + E DT W SLL+A
Sbjct: 630 QAIHYFETM-QAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSA 688
Query: 483 CVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
C N E+GE AAKK+ EL+ N+A YV+LSN+YA+ G W+D R+LM+ + K
Sbjct: 689 CSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGASLKKDA 748
Query: 543 AYSWIEIGNKVHYFLGGDMSHP 564
SW+++ + H F HP
Sbjct: 749 GCSWLQLRGQYHAFFSWKEKHP 770
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 204/455 (44%), Gaps = 103/455 (22%)
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
DR D AF A ++ TY+ M+S +K G + A RLF MP ++V+SYT M+D M
Sbjct: 133 DR-DQAFRDCVAADAASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALM 191
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------ 233
K+G V A L + +V +T MI+G+V+NE +A +F +M P+
Sbjct: 192 KRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLIC 251
Query: 234 --------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
++K++ V ++IT + ++G A +F+ ++ +
Sbjct: 252 VIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVR 311
Query: 268 DCVSFNAMIAGYA-------------------------------QNGVAEEALRLFSGMI 296
D VS+ A++ YA Q G EAL+L+S M+
Sbjct: 312 DVVSWTALLDVYADLGDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQML 371
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC---- 352
+P+ + SV +AC+ LQ L G + H ++ G N+ V +++I MY +C
Sbjct: 372 ADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCT 431
Query: 353 ---------------------------GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
G ++++E F ++ + N VSWNT+I+ +A++
Sbjct: 432 YAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRR 491
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+ AL +F M +G P IT S+L AC + + + +VK+ GI + T
Sbjct: 492 FGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKL-GIEDNIFMGT 550
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
L D+ +++G L+ + ++ MP E + W +++
Sbjct: 551 ALSDMYAKSGDLDSSRRVFYQMP-EKNNITWTAMV 584
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 143/289 (49%), Gaps = 19/289 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
+++ S+ +FV+++ I + + + A+++F+ + K+ + WN++I+GY NG + E++
Sbjct: 406 LKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAE 465
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF-------- 153
LF MP +N VSWN MI+G +N R DA +YF AM +S
Sbjct: 466 GLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLC 525
Query: 154 -LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
L+ GR+ A + + N+ TA+ D + K G++D +R + M KN ++WT M+
Sbjct: 526 SLEMGRMVHA-EIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKNNITWTAMV 584
Query: 213 TGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQ----P 266
G +N E+ LF M + N A++ G++E A FE +Q P
Sbjct: 585 QGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIP 644
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
+ M+ A+ G EA L ++K+ + D ++ S+ +ACS
Sbjct: 645 PKSKHYTCMVDVLARAGCLPEAEEL---LMKVSSELDTSSWSSLLSACS 690
>gi|115474659|ref|NP_001060926.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|42408463|dbj|BAD09644.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50725835|dbj|BAD33365.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113622895|dbj|BAF22840.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|215704880|dbj|BAG94908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712334|dbj|BAG94461.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 674
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 288/535 (53%), Gaps = 46/535 (8%)
Query: 55 AKISALSRAGKISAARQLFDQMTT--KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
A IS L++A + A ++++M +D + NA++ GY + G L + +F+ M V+++
Sbjct: 136 AIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDV 195
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
+SW+ M+ G + + +A F AMPERN ++ +MI G++K G + LF M R
Sbjct: 196 ISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRRE 255
Query: 173 NV------------------------------ISYTAMLDGFMKKG----------EVDK 192
V IS LD F+ VD
Sbjct: 256 GVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDA 315
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
RA D M K++VSW +ITGYV+++ EA LF M + K+ T+M+ GF G
Sbjct: 316 KRAF-DCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLM--HQKDAVSWTSMVVGFANRG 372
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ + LFE++ KD V++ A+I+ + NG A+R F M + +P+ + +
Sbjct: 373 WMRESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLS 432
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
A ++L +LN+GRQ+H I G+ + +V ++++MY++CG + ++ F I +P+L++
Sbjct: 433 ALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIA 492
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
N++I AF QHG E AL F++M G+ P+ +TFL +L+ C AG V + + FE M
Sbjct: 493 INSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMR 552
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
VYG+ P+ EHYTC+VD+L RAG L +A ++ MP + W +LL+A ++ N+
Sbjct: 553 PVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFA 612
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
++AA+K+ E DP ++ Y +LS ++++AGM D ++++ +K+ YS I
Sbjct: 613 KIAAQKLLEKDPYDATAYTVLSRMFSSAGM-EDEEMLKVVQLSNLASKRPGYSLI 666
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 203/380 (53%), Gaps = 39/380 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA +++ R G++ A+ LFDQM ++DVI+W A++T Y G L ++ +F MP +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP--R 171
SWN +++ + R A F MP +N +Y A+ISG K L EA ++E+MP
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQW 161
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
R+ + A++ G+++ GE+ A + + M+ ++V+SW+ M+ G K+ EAR +F M
Sbjct: 162 RDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAM 221
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P ++NV T+MI G+ K GM + LLF ++ + GV
Sbjct: 222 P--ERNVVSWTSMIRGYVKRGMCRDGLLLFLNMR---------------REGV------- 257
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
Q + TL AC+A L EG Q H L+I GFE ++ + +++I MYSR
Sbjct: 258 ---------QVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSR 308
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G ++D++ AF + ++VSWN++I + QH E+A + F M D +++ S+
Sbjct: 309 FGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLM----HQKDAVSWTSM 364
Query: 412 LSACGHAGKVNESMDLFELM 431
+ + G + ES++LFE M
Sbjct: 365 VVGFANRGWMRESVELFEQM 384
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 138/270 (51%), Gaps = 16/270 (5%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
N +I + +F+ ++ I SR G + A++ FD M KD+++WN++ITGY Q+ ++
Sbjct: 285 NLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVE 344
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
E+ LF+ M K+ VSW M+ G + + ++ + F+ MP ++ + A+IS F+ +G
Sbjct: 345 EAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGD 404
Query: 159 LEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDY-----MSFKNVVSWT 209
A R F +M + N I+++ +L +++ R Y F + V T
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVH-T 463
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ---- 265
+++ Y K R EA +F + + ++ + +MIT F + G +E+A LF ++Q
Sbjct: 464 SLVSMYAKCGRLAEAYHVFSSIS--NPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGY 521
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ V+F ++ G A+ G ++ F M
Sbjct: 522 KPNHVTFLGILTGCARAGFVQQGYNYFESM 551
>gi|325260820|gb|ADZ04639.1| hypothetical protein [Oryza glaberrima]
Length = 674
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 288/535 (53%), Gaps = 46/535 (8%)
Query: 55 AKISALSRAGKISAARQLFDQMTT--KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
A IS L++A + A ++++M +D + NA++ GY + G L + +F+ M V+++
Sbjct: 136 AIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDV 195
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
+SW+ M+ G + + +A F AMPERN ++ +MI G++K G + LF M R
Sbjct: 196 ISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRRE 255
Query: 173 NV------------------------------ISYTAMLDGFMKKG----------EVDK 192
V IS LD F+ VD
Sbjct: 256 GVQVNTTTLSVALDACAVASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDA 315
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
RA D M K++VSW +ITGYV+++ EA LF M + K+ T+M+ GF G
Sbjct: 316 KRAF-DCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLM--HQKDAVSWTSMVVGFANRG 372
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ + LFE++ KD V++ A+I+ + NG A+R F M + +P+ + +
Sbjct: 373 WMRESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLS 432
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
A ++L +LN+GRQ+H I G+ + +V ++++MY++CG + ++ F I +P+L++
Sbjct: 433 ALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIA 492
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
N++I AF QHG E AL F++M G+ P+ +TFL +L+ C AG V + + FE M
Sbjct: 493 INSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMR 552
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
VYG+ P+ EHYTC+VD+L RAG L +A ++ MP + W +LL+A ++ N+
Sbjct: 553 PVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFA 612
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
++AA+K+ E DP ++ Y +LS ++++AGM D ++++ +K+ YS I
Sbjct: 613 KIAAQKLLEKDPYDATAYTVLSRMFSSAGM-EDEEMLKVVQLSNLASKRPGYSLI 666
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 202/380 (53%), Gaps = 39/380 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA +++ R G++ A+ LFDQM ++DVI+W A++T Y G L ++ +F MP +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP--R 171
SWN +++ + R A F MP +N +Y A+ISG K L EA ++E+MP
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQW 161
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
R+ + A++ G+++ GE+ A + + M+ ++V+SW+ M+ G K+ EAR +F M
Sbjct: 162 RDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAM 221
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P ++NV T+MI G+ K GM + LLF ++ + GV
Sbjct: 222 P--ERNVVSWTSMIRGYVKRGMCRDGLLLFLNMR---------------REGV------- 257
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
Q + TL AC+ L EG Q H L+I GFE ++ + +++I MYSR
Sbjct: 258 ---------QVNTTTLSVALDACAVASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSR 308
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G ++D++ AF + ++VSWN++I + QH E+A + F M D +++ S+
Sbjct: 309 FGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLM----HQKDAVSWTSM 364
Query: 412 LSACGHAGKVNESMDLFELM 431
+ + G + ES++LFE M
Sbjct: 365 VVGFANRGWMRESVELFEQM 384
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 138/270 (51%), Gaps = 16/270 (5%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
N +I + +F+ ++ I SR G + A++ FD M KD+++WN++ITGY Q+ ++
Sbjct: 285 NLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVE 344
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
E+ LF+ M K+ VSW M+ G + + ++ + F+ MP ++ + A+IS F+ +G
Sbjct: 345 EAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGD 404
Query: 159 LEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDY-----MSFKNVVSWT 209
A R F +M + N I+++ +L +++ R Y F + V T
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVH-T 463
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ---- 265
+++ Y K R EA +F + + ++ + +MIT F + G +E+A LF ++Q
Sbjct: 464 SLVSMYAKCGRLAEAYHVFSSIS--NPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGY 521
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ V+F ++ G A+ G ++ F M
Sbjct: 522 KPNHVTFLGILTGCARAGFVQQGYNYFESM 551
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/559 (30%), Positives = 298/559 (53%), Gaps = 62/559 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V +A I L+R G +++AR++FD + K V+ W +I+ Y Q +E+ +F
Sbjct: 188 IAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFL---- 243
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
D ++D F+ P+R T + +MIS + G + +L
Sbjct: 244 ----------------DFLEDGFE-----PDRYTMS--SMISACTELGSVRLGLQLHSLA 280
Query: 170 PRRNVIS----YTAMLDGFMKKG---EVDKARALSDYMSFKNVVSWTVMITGYVKNE-RF 221
R S ++D + K +D A + + M +V+SWT +I+GYV++ +
Sbjct: 281 LRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQE 340
Query: 222 CEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERI----QPKDCVSFNAM 275
+ LF M N ++++ + ++ R + + Q NA+
Sbjct: 341 NKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNAL 400
Query: 276 IAGYAQNGVAEEALRLFSGMI---------------------KMDMQPDDATLVSVFTAC 314
++ YA++G EEA R+F+ + +MDM +T S+ +A
Sbjct: 401 VSMYAESGCMEEARRVFNQLYERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAA 460
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+++ +L +G+Q H + ++ GF ++ V N++++MYSRCG + D+ +F ++ N++SW
Sbjct: 461 ASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWT 520
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
++I+ A+HG+ E+AL F M L G P+ +T++++LSAC H G V E + F M +
Sbjct: 521 SMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRD 580
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
+G+IP EHY C+VD+L+R+G +++A + MP +AD VW +LL AC + N+E+GE+
Sbjct: 581 HGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEI 640
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
AAK + EL+P++ A YV+LSNLYA AG+W +V R+R M++ + K+ SW+E+ N H
Sbjct: 641 AAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTH 700
Query: 555 YFLGGDMSHPCIDKIHLEL 573
F GD SHP I+ +L
Sbjct: 701 EFRAGDTSHPRAQDIYGKL 719
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 143/291 (49%), Gaps = 13/291 (4%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPR-RNVISYTAMLDGFMKKGEVDKARALSD 198
+R+ N++++ + + G + A +F+ M R+++S+TAM + G ++ L
Sbjct: 81 DRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIG 140
Query: 199 YMS----FKNVVSWTVMITGYVKNERFCEARELF----YRMPDYDKNVFVVTAMITGFCK 250
M N + + +E +C + ++M + ++ V +A+I +
Sbjct: 141 EMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLAR 200
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G L +AR +F+ + K V + +I+ Y Q AEEA+ +F ++ +PD T+ S+
Sbjct: 201 NGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSM 260
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG--GILD-SELAFRQIHS 367
+AC+ L + G Q H L +R GF ++ V ++ MY++ +D + F ++
Sbjct: 261 ISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRK 320
Query: 368 PNLVSWNTIIAAFAQHGHYE-KALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+++SW +I+ + Q G E K ++ F +M P+ IT+ S+L AC +
Sbjct: 321 NDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACAN 371
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 266/485 (54%), Gaps = 19/485 (3%)
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLD----- 182
++ A F MP +N I L+ +L++ LF +M + + TA +
Sbjct: 574 LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 633
Query: 183 -----GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
GF+ G+ L + +V T +I YVKN A+ +F M + +N
Sbjct: 634 SISELGFLNMGKETHGYVLRNGFDC-DVYVGTSLIDMYVKNHSLTSAQAVFDNMKN--RN 690
Query: 238 VFVVTAMITGFCKVGMLENA-RLL----FERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
+F ++++G+ GM E+A RLL E I+P D V++N MI+GYA G +EAL F
Sbjct: 691 IFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKP-DLVTWNGMISGYAMWGCGKEALAFF 749
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ M + + P+ A++ + AC++L LL +G++ H L IRNGF +V V A+I MYS+
Sbjct: 750 AQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKS 809
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
+ ++ FR+I + L SWN +I FA G ++A+ F++M G PD ITF +LL
Sbjct: 810 SSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALL 869
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
SAC ++G + E F+ M+ Y I+P EHY C+VD+L RAG L++AW + MP + D
Sbjct: 870 SACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPD 929
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
+WG+LL +C I+ N++ E AAK + +L+P NSA Y+++ NLY+ W D+ +R L
Sbjct: 930 ATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLREL 989
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATS 592
M GV + +SWI+I +VH F + HP KI+ EL + +MK + ++
Sbjct: 990 MGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCV 1049
Query: 593 WSSFD 597
+ + D
Sbjct: 1050 YQNMD 1054
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 145/337 (43%), Gaps = 56/337 (16%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
CLI+ V++ A ++ R + A Q+F +M + + WN I Q+ LQ+
Sbjct: 548 CLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQK 607
Query: 100 SKNLFQSM-------PVKNIV--------------------------SWNC-------MI 119
LF+ M IV ++C +I
Sbjct: 608 GVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLI 667
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----I 175
+ N + A F M RN +N+++SG+ G E+A RL QM + + +
Sbjct: 668 DMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLV 727
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD-- 233
++ M+ G+ G +A A M + V+ + IT + R C + L + +
Sbjct: 728 TWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLL---RACASLSLLQKGKEIH 784
Query: 234 -------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+ ++VFV TA+I + K L+NA +F RIQ K S+N MI G+A G+ +
Sbjct: 785 CLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGK 844
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
EA+ +F+ M K+ + PD T ++ +AC L+ EG
Sbjct: 845 EAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG 881
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 244 MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN-GVAEEALRLFSGMIKMDMQP 302
+I+ + G +A ++F P++ + +N+ + + + G L +F + +
Sbjct: 462 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 521
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D C+ + + G + H +I+ GF+ +V + A++ Y RC G+ + F
Sbjct: 522 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 581
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
++ +P + WN I Q +K + F +M + + T + +L A
Sbjct: 582 HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 633
>gi|18398422|ref|NP_564401.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806407|sp|P0C7R0.1|PPR69_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g32415, mitochondrial; Flags: Precursor
gi|332193363|gb|AEE31484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 295/560 (52%), Gaps = 53/560 (9%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N ++ L R G + A+Q+FD M ++DV++WNA+I GY +N ++E+K LF M KN+V
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV 232
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR-- 171
+W M+ G + +A+ F MPERN ++ AMISGF + EA LF +M +
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDV 292
Query: 172 -------RNVISYTAMLDG----FMKKGEVDKARALS--------DYMSFKNVV------ 206
+IS G F + GE A+ +S D K++V
Sbjct: 293 DAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASS 352
Query: 207 -----------------SWTVMITGYVKNERFCEARELFYRMPD-YDKNVFVVTAMITGF 248
S ++I Y+KN A LF R+ +DK + T+MI G+
Sbjct: 353 GLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSW--TSMIDGY 410
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
+ G + A LF+++ KD V++ MI+G QN + EA L S M++ ++P ++T
Sbjct: 411 LEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYS 470
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNG--FEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+ ++ A L++G+ H ++ + ++ ++ + N++++MY++CG I D+ F ++
Sbjct: 471 VLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMV 530
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+ VSWN++I + HG +KAL F +M +G P+ +TFL +LSAC H+G + ++
Sbjct: 531 QKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLE 590
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LF+ M + Y I P +HY ++D+L RAG+L++A + +PF D V+G+LL C +N
Sbjct: 591 LFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLN 650
Query: 487 LNVE----LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
+ + E AA ++ ELDP N+ +V L N+YA G +R M +GV K
Sbjct: 651 WRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTP 710
Query: 543 AYSWIEIGNKVHYFLGGDMS 562
SW+ + + + FL GD S
Sbjct: 711 GCSWVVVNGRANVFLSGDKS 730
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 216/444 (48%), Gaps = 76/444 (17%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
+S ++ G + AR LF+ M ++++T NA++TGY + + E+ LF+ MP KN+VSW
Sbjct: 84 LSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWT 142
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
M+ D+ R +DA + F MPERN ++N +++G +++G +E+A ++F+ MP R+V+S
Sbjct: 143 VMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVS 202
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+ AM+ G+++ +++A+ L MS KNVV+WT M+ GY + EA LF MP ++
Sbjct: 203 WNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP--ER 260
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N+ TAMI+GF A N + EAL LF M
Sbjct: 261 NIVSWTAMISGF-------------------------------AWNELYREALMLFLEMK 289
Query: 297 K-MD-MQPDDATLVSVFTACSAL--QLLNEGRQSHVLVIRNGFEA--------------- 337
K +D + P+ TL+S+ AC L + G Q H VI NG+E
Sbjct: 290 KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Query: 338 -----------------NVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAA 379
++ CN +I Y + G + +E F ++ S + VSW ++I
Sbjct: 350 ASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDG 409
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ + G +A F ++ D DG+T+ ++S E+ L MV+ G+ P
Sbjct: 410 YLEAGDVSRAFGLFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC-GLKP 464
Query: 440 SSEHYTCLVDILSRAGQLEKAWQI 463
+ Y+ L+ L++ I
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHI 488
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 219/467 (46%), Gaps = 51/467 (10%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L + + + NA ++ + +++ A LF +M K+V++W ++T +G +++
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDA 157
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
LF MP +N+VSWN ++ G I N ++ A F AMP R+ ++NAMI G++++ +E
Sbjct: 158 VELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGME 217
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
EA LF M +NV+++T+M+ G+ + G+V +A L M +N+VSWT MI+G+ NE
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNEL 277
Query: 221 FCEARELFYRMPDYDKNVFVV-----TAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ EA LF M K+V V T + + G+ R L E++
Sbjct: 278 YREALMLFLEMK---KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLH---------- 324
Query: 276 IAGYAQNG--VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG--RQSHVLVI 331
A NG + RL ++ M S SA LLNE QS ++I
Sbjct: 325 -AQVISNGWETVDHDGRLAKSLVHM--------YASSGLIASAQSLLNESFDLQSCNIII 375
Query: 332 ----RNG--------FEANVSVCNAV-----ITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+NG FE S+ + V I Y G + + F+++H + V+W
Sbjct: 376 NRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWT 435
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I+ Q+ + +A S M G P T+ LLS+ G +++ + ++ K
Sbjct: 436 VMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKT 495
Query: 435 YGII-PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
P LV + ++ G +E A++I M + DT W S++
Sbjct: 496 TACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMI 541
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 39 NCLIRLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
+C+I + Y + + N+ +S ++ G I A ++F +M KD ++WN++I G +G
Sbjct: 489 HCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHG 548
Query: 96 FLQESKNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----Y 146
++ NLF+ M N V++ +++ C + I + F+AM E + Y
Sbjct: 549 LADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHY 608
Query: 147 NAMISGFLKHGRLEEATRLFEQMP 170
+MI + G+L+EA +P
Sbjct: 609 ISMIDLLGRAGKLKEAEEFISALP 632
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 196/678 (28%), Positives = 329/678 (48%), Gaps = 118/678 (17%)
Query: 14 RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLF 73
++ F +LR +T C + + L +T + A +S ++ G ++AAR +F
Sbjct: 332 KVTFVTVLRACTTLAQCEKIFARVKHLGLELDTT----LGTAFVSTFAKLGDLAAARDVF 387
Query: 74 DQM-TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK-NIVSWNCMIAGCIDND----- 126
+ + ++++V++W +I Y Q GF++ + +L++ M + N V++ ++ C+ +
Sbjct: 388 ENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRA 447
Query: 127 ------------------------------RIDDAFDYFQAMPERNTATYNAMISGFLKH 156
+D A+ F+ + ER+ +N+M+S F +
Sbjct: 448 EQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASN 507
Query: 157 GRLEEATRLFEQM----PRRNVISYTAMLDG----------------------------- 183
G E + +L+E+M + + I+Y A+LD
Sbjct: 508 GCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEARRYAATFELELDIAARNAAVSA 567
Query: 184 FMKKGEVDKARALSDYMSFKN-VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT 242
+ + G + +A+A D + +KN V+W MI+G ++ +A E F++M VT
Sbjct: 568 YARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVT 627
Query: 243 ------------------------------------AMITGFCKVGMLENARLLFERIQP 266
A+I + K G L+ A F ++
Sbjct: 628 YLASLEACSSLKDLTRGRQLHARILLENIHEANLSNAVINMYGKCGSLDEAMDEFVKMPE 687
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
+D +S+N MIA YAQ+G +AL F M PD AT + AC ++ L G+
Sbjct: 688 RDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTI 747
Query: 327 HVLVIRNG--FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
H +V E + V A++TMY+RCG + D++ F + HS NLV+W+ +IAA AQHG
Sbjct: 748 HSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHG 807
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE-SMDLFELMVKVYGIIPSSEH 443
+AL F +M L G PD +TF +L++AC G V + +F+ + +VY + S+EH
Sbjct: 808 RENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPVSASAEH 867
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y C+V++L RAG+LE+A + QGMP +A +W +LLAAC ++E G AA + ++LD
Sbjct: 868 YGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRGDLERGIRAANRAQQLD 927
Query: 504 PQN-SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ-CAYSWIEIGNKVHYFLGGD- 560
P + +A ML+ LY AAG W D RVR ++ + ++ SWIE+ N+VH F D
Sbjct: 928 PGSFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVNNRVHEFGEDDD 987
Query: 561 -MSHPCIDKIHLELKRAS 577
+ P +DKI EL+R S
Sbjct: 988 RLQGPRLDKIRGELQRLS 1005
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 249/532 (46%), Gaps = 62/532 (11%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDV---ITWNAIITGYWQNGFLQESKNLFQSM 107
FV + ++A S AG ++ + + D + + + NAI+ Y + G + E+K +F+ +
Sbjct: 128 FVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQVVGNAIVNLYGKCGRVHEAKAVFERL 187
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEA 162
P +N+VSWN +IA N DA FQ M N AT+ +++ L
Sbjct: 188 PERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRG 247
Query: 163 TRLFEQMPRRNVISY----TAMLDGFMKKGEVDKARALSDYMSFKNVVS---WTVMITGY 215
E++ R SY ++++ + K G VD AR + + M ++V+S WTV+I +
Sbjct: 248 KSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAF 307
Query: 216 VKNERFCEARELFYRM------PDYDKNVFVV---------------------------- 241
N EA LFY+M P+ V V+
Sbjct: 308 AHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEKIFARVKHLGLELDTTLG 367
Query: 242 TAMITGFCKVGMLENARLLFERI-QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
TA ++ F K+G L AR +FE + ++ VS+ MI YAQ G A L+ +MD
Sbjct: 368 TAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYK---RMDC 424
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+P+ T ++V +C + L Q H ++ +GFE++V + ++TMY +CG + +
Sbjct: 425 EPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWS 484
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F + ++V+WN++++AFA +G YE++L + +M L G PD IT+L++L AC +
Sbjct: 485 IFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSE 544
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
FEL + + V +R G L++A + ++ + W +++
Sbjct: 545 ARRYAATFELELDIAA-------RNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMI 597
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
+ + + KM EL+ + L++L A + + +D+TR R L
Sbjct: 598 SGLAQHGESKQALECFWKM-ELEGVRANSVTYLASLEACSSL-KDLTRGRQL 647
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 238/482 (49%), Gaps = 27/482 (5%)
Query: 18 PPILRILSTPDSCGNFT--PHSSNCLIRLFST---QYVFVNNAKISALSRAGKISAARQL 72
P +S D+C N P + R+ T Y+FV N+ ++ + G + AR +
Sbjct: 226 PNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLV 285
Query: 73 FDQMTTKDVI---TWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCIDN 125
F++M +DV+ +W II + NG L E+ LF M ++ N V++ ++ C
Sbjct: 286 FEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTL 345
Query: 126 DRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEATRLFEQM-PRRNVISYTAMLDG 183
+ + F + + E +T A +S F K G L A +FE + RNV+S+T M+
Sbjct: 346 AQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWA 405
Query: 184 FMKKGEVDKARALSDYMSFK-NVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFV 240
+ ++G + A L M + N V++ ++ ++ E A ++ M ++ +V +
Sbjct: 406 YAQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVL 465
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
++T + K G +++A +FE ++ + V++N+M++ +A NG E +L+L+ M+
Sbjct: 466 QVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGT 525
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+PD T ++V AC Q ++E R+ E +++ NA ++ Y+RCG + +++
Sbjct: 526 KPDKITYLAVLDAC---QSVSEARRYAATF---ELELDIAARNAAVSAYARCGSLKEAKA 579
Query: 361 AFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
AF I N V+WN +I+ AQHG ++AL F +M L G + +T+L+ L AC
Sbjct: 580 AFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLK 639
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ L + + I + ++++ + G L++A MP E D W ++
Sbjct: 640 DLTRGRQLHARI--LLENIHEANLSNAVINMYGKCGSLDEAMDEFVKMP-ERDVISWNTM 696
Query: 480 LA 481
+A
Sbjct: 697 IA 698
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 129/253 (50%), Gaps = 13/253 (5%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N ++ +I + K G L++A +FE + + S+ A+I YA+ G E L F M
Sbjct: 60 NRYLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQ 119
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+PD +V TACS+ LNEG+ H V+ G E V V NA++ +Y +CG +
Sbjct: 120 LDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQV-VGNAIVNLYGKCGRVH 178
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-FDPDGITFLSLLSAC 415
+++ F ++ NLVSWN +IAA AQ+GH + A+ F M L+G P+ TF+S++ AC
Sbjct: 179 EAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDAC 238
Query: 416 GHAGKVNESMDLFELMVKV----YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+ + E +++ Y + +S LV++ + G ++ A + + M
Sbjct: 239 SNLLDLPRGKSTHERIIRTGFDSYLFVGNS-----LVNMYGKCGSVDHARLVFEKMRLRD 293
Query: 472 DTGV--WGSLLAA 482
V W ++AA
Sbjct: 294 VLSVYSWTVIIAA 306
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 96/183 (52%), Gaps = 5/183 (2%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+QP A S+ C+ + G+ H ++ +G N + N +I MY++CG + D+
Sbjct: 24 LQP--ARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAV 81
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + PN+ SW +I A+A+ GH + L FF +M L+G PD F ++L+AC AG
Sbjct: 82 EVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAG 141
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+NE + + + V + + +V++ + G++ +A + + +P E + W +L
Sbjct: 142 ALNEGKAIHDCV--VLAGMETQVVGNAIVNLYGKCGRVHEAKAVFERLP-ERNLVSWNAL 198
Query: 480 LAA 482
+AA
Sbjct: 199 IAA 201
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 288/509 (56%), Gaps = 17/509 (3%)
Query: 88 ITGYWQNGFLQESKNLFQSMPVKNIVSWNC---MIAGCIDNDRIDDAFDYFQAMPERN-- 142
I+ NG LQE+ L + + + + ++C ++ C+D + + M +
Sbjct: 26 ISQLCSNGRLQEA--LLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYL 83
Query: 143 TATY--NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
ATY ++ + K LE+A ++ ++MP +NV+S+TAM+ + + G +A ++ M
Sbjct: 84 PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEM 143
Query: 201 ----SFKNVVSWTVMITGYVKNERFCEARELFYRMP--DYDKNVFVVTAMITGFCKVGML 254
N ++ ++T ++ +++ + +YD ++FV ++++ + K G +
Sbjct: 144 MRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQI 203
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E AR +FE + +D VS A+IAGYAQ G+ EEAL +F + M+P+ T S+ TA
Sbjct: 204 EEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTAL 263
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
S L LL+ G+Q+H V+R + N++I MYS+CG + ++ F + +SWN
Sbjct: 264 SGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWN 323
Query: 375 TIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
++ +++HG + L F M PD +T L++LS C H + + +++ MV
Sbjct: 324 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVA 383
Query: 434 -VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
YGI P +EHY C+VD+L RAG++++A++ + MP + GV GSLL AC ++L+V++G
Sbjct: 384 GEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIG 443
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNK 552
E ++ E++P+N+ YV+LSNLYA+AG W DV VR +M ++ VTK+ SWI+
Sbjct: 444 EYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQT 503
Query: 553 VHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+HYF D +HP +++ ++K S++MK
Sbjct: 504 LHYFHANDRTHPRREEVLAKMKEISIKMK 532
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 204/439 (46%), Gaps = 64/439 (14%)
Query: 44 LFSTQYVFVNNAKISALSRAGK---ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+ T+Y+ + L GK + AR++ D+M K+V++W A+I+ Y Q G E+
Sbjct: 77 MIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEA 136
Query: 101 KNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISG 152
++F M N ++ ++ CI + + + N ++ ++++
Sbjct: 137 LSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDM 196
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMSFKNVVS 207
+ K G++EEA +FE +P R+V+S TA++ G+ + G ++A R S+ M N V+
Sbjct: 197 YAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMR-PNYVT 255
Query: 208 WTVMIT-----GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
+ ++T + + + L +P Y + ++I + K G L A+ LF+
Sbjct: 256 YASLLTALSGLALLDHGKQAHCHVLRRELPFY---AVLQNSLIDMYSKCGNLSYAQRLFD 312
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLN 321
+ + +S+NAM+ GY+++G+ E L LF M + ++PD TL++V + CS ++ +
Sbjct: 313 NMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMED 372
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G +++Y G++ E + P+ + I+
Sbjct: 373 TG----------------------LSIYD---GMVAGEYGIK----PDTEHYGCIVDMLG 403
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM-VKVYGIIP- 439
+ G ++A F +M P SLL AC +V+ S+D+ E + ++ I P
Sbjct: 404 RAGRIDEAFEFIKRMPSK---PTAGVLGSLLGAC----RVHLSVDIGEYVGHRLIEIEPE 456
Query: 440 SSEHYTCLVDILSRAGQLE 458
++ +Y L ++ + AG+ E
Sbjct: 457 NAGNYVILSNLYASAGRWE 475
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 188/652 (28%), Positives = 313/652 (48%), Gaps = 123/652 (18%)
Query: 54 NAKISALSRAGK--ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
N ++A SR+ ++AAR++FD++ +D ++WNA++ +G E+ L ++M +
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 112 IVSWN-------------------------CMIAGCIDN--------------DRIDDAF 132
+ S + +G +N R+ DA
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR-------------------- 172
F MPERNT ++NA+I+G+ + G + A LF +M R
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPS 208
Query: 173 ---------NVISY---------TAMLDGFMKKGEVDKARALSDYMS-FKNVVSWTVMIT 213
++ Y A + + + G + +R + D + ++++SW M+
Sbjct: 209 CFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLG 268
Query: 214 GYVKNERFCEARELFYRM-------PDYDKNVFVVT------------------------ 242
Y N EA + F RM PD +++
Sbjct: 269 AYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSAL 328
Query: 243 -----------AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
AM T + + M+E+A F + KD VS+N+M+ GY+Q+G++ +AL+
Sbjct: 329 EGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKF 388
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
F M +++ D+ + + S L +L G+Q H LVI +GF +N V +++I MYS+
Sbjct: 389 FRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSK 448
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G I D+ +F + + V WN +I +AQHG E I F++M D ITF+ L
Sbjct: 449 SGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGL 508
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+++C HAG V+E ++ M YG+ EHY C VD+ RAGQL+KA ++ MPFE
Sbjct: 509 ITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEP 568
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
D VW +LL AC I+ NVEL A + +P+ + YV+LS++Y+ GMW D V+
Sbjct: 569 DAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQR 628
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+MK++G++K +SWIE+ N+VH F D SHP +D+I+ E+ R +Q++ +
Sbjct: 629 VMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIY-EMLRVLLQVEQM 679
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 188/652 (28%), Positives = 313/652 (48%), Gaps = 123/652 (18%)
Query: 54 NAKISALSRAGK--ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
N ++A SR+ ++AAR++FD++ +D ++WNA++ +G E+ L ++M +
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 112 IVSWN-------------------------CMIAGCIDN--------------DRIDDAF 132
+ S + +G +N R+ DA
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR-------------------- 172
F MPERNT ++NA+I+G+ + G + A LF +M R
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPS 208
Query: 173 ---------NVISY---------TAMLDGFMKKGEVDKARALSDYMS-FKNVVSWTVMIT 213
++ Y A + + + G + +R + D + ++++SW M+
Sbjct: 209 CFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLG 268
Query: 214 GYVKNERFCEARELFYRM-------PDYDKNVFVVT------------------------ 242
Y N EA + F RM PD +++
Sbjct: 269 AYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSAL 328
Query: 243 -----------AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
AM T + + M+E+A F + KD VS+N+M+ GY+Q+G++ +AL+
Sbjct: 329 EGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKF 388
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
F M +++ D+ + + S L +L G+Q H LVI +GF +N V +++I MYS+
Sbjct: 389 FRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSK 448
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G I D+ +F + + V WN +I +AQHG E I F++M D ITF+ L
Sbjct: 449 SGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGL 508
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+++C HAG V+E ++ M YG+ EHY C VD+ RAGQL+KA ++ MPFE
Sbjct: 509 ITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEP 568
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
D VW +LL AC I+ NVEL A + +P+ + YV+LS++Y+ GMW D V+
Sbjct: 569 DAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQR 628
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+MK++G++K +SWIE+ N+VH F D SHP +D+I+ E+ R +Q++ +
Sbjct: 629 VMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIY-EMLRVLLQVEQM 679
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 173/351 (49%), Gaps = 15/351 (4%)
Query: 143 TATYNAMISGFLKHGR--LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM 200
T +N +++ + + L A R+F+++PRR+ +S+ A+L G +A L M
Sbjct: 25 TTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAM 84
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------KNVFVVTAMITGFCKVGML 254
+ + S T + +++ + ++ NVF +A++ + K G +
Sbjct: 85 HAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRV 144
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+AR +F+ + ++ VS+NA+IAGY ++G AL LF M + + PD+AT S+ TA
Sbjct: 145 RDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAV 204
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSW 373
Q H +++ G ++V NA IT YS+CG + DS F I +L+SW
Sbjct: 205 EGPSCFLM-HQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISW 263
Query: 374 NTIIAAFAQHGHYEKALIFFSQ-MGLNGFDPDGITFLSLLSACG-HAGKVNESMDLFELM 431
N ++ A+ +G ++A+ FF + M +G PD +F S++S+C H ++ + L+
Sbjct: 264 NAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLV 323
Query: 432 VK--VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+K + G+ P + + +E A++ + + DT W S+L
Sbjct: 324 IKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLK-DTVSWNSML 373
>gi|147820355|emb|CAN67654.1| hypothetical protein VITISV_038410 [Vitis vinifera]
Length = 492
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 244/424 (57%), Gaps = 2/424 (0%)
Query: 150 ISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
IS + G ++ A +FE+M + +S+ M+ G+++ + AR L D M ++ VSW
Sbjct: 55 ISDYSLKGEVDYARTIFEEMSHPDTVSWNVMIRGYVENHRIGDARELFDKMPVRSSVSWN 114
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
MI Y K + A +LF MPD K+V TA+IT + +E+A LF+ +
Sbjct: 115 TMIMAYAKEGKTHIAMKLFIVMPD--KDVVSWTAIITALSRGSHIEDAWRLFKLMPEPSS 172
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+ ++I+G+ QNG+A E L F M+ + +QP + S TA + L +L+ +Q +
Sbjct: 173 VSWASIISGFQQNGLAAETLCRFKEMLSVGVQPTSHSFTSALTASADLAMLSLSQQLYSQ 232
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+++ GFE+N + N+ I+M+ + G ++ + P++V+WN ++ + Q+G+ +A
Sbjct: 233 LLKRGFESNTXIGNSAISMFIKSGSFRNARRVLEDLPQPDIVTWNAMVVGYGQNGYGIEA 292
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
++ F QM F PD ++FL LL C H G V + F M YGI P EHY C+VD
Sbjct: 293 IMSFHQMQKAKFLPDRVSFLGLLHGCSHCGYVEKGKQYFRSMESNYGISPGPEHYACMVD 352
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+LSRAG L++A ++ + MPFE W +LL C I ++ELG AA ++ ELDP NS+
Sbjct: 353 LLSRAGFLKEAHKLIKEMPFEPTCIFWRTLLNGCRIWGDLELGFYAANRILELDPYNSSA 412
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
+M+ ++YA+AG W++V +R M+++ K+ SWIEI ++H F D +HP D I
Sbjct: 413 CLMVIDIYASAGRWKEVLEMRRQMRKREARKELGCSWIEIKGRIHLFTTRDDTHPEADHI 472
Query: 570 HLEL 573
+L L
Sbjct: 473 YLTL 476
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 188/395 (47%), Gaps = 15/395 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V + +IS S G++ AR +F++M+ D ++WN +I GY +N + +++ LF MPV
Sbjct: 48 VLMLTKRISDYSLKGEVDYARTIFEEMSHPDTVSWNVMIRGYVENHRIGDARELFDKMPV 107
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
++ VSWN MI + A F MP+++ ++ A+I+ + +E+A RLF+ M
Sbjct: 108 RSSVSWNTMIMAYAKEGKTHIAMKLFIVMPDKDVVSWTAIITALSRGSHIEDAWRLFKLM 167
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVKNERFCE 223
P + +S+ +++ GF + G A L + +V S+T +T
Sbjct: 168 PEPSSVSWASIISGFQQNGLA--AETLCRFKEMLSVGVQPTSHSFTSALTASADLAMLSL 225
Query: 224 ARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
+++L+ ++ ++ N + + I+ F K G NAR + E + D V++NAM+ GY Q
Sbjct: 226 SQQLYSQLLKRGFESNTXIGNSAISMFIKSGSFRNARRVLEDLPQPDIVTWNAMVVGYGQ 285
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVS 340
NG EA+ F M K PD + + + CS + +G+Q + N G
Sbjct: 286 NGYGIEAIMSFHQMQKAKFLPDRVSFLGLLHGCSHCGYVEKGKQYFRSMESNYGISPGPE 345
Query: 341 VCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
++ + SR G + ++ +++ P + W T++ G E L F++ +
Sbjct: 346 HYACMVDLLSRAGFLKEAHKLIKEMPFEPTCIFWRTLLNGCRIWGDLE--LGFYAANRIL 403
Query: 400 GFDP-DGITFLSLLSACGHAGKVNESMDLFELMVK 433
DP + L ++ AG+ E +++ M K
Sbjct: 404 ELDPYNSSACLMVIDIYASAGRWKEVLEMRRQMRK 438
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 183/610 (30%), Positives = 307/610 (50%), Gaps = 92/610 (15%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTK---DVITWNAIITGYWQNGFLQESKNLFQS 106
VFV NA ++ SR G + A +FD++T K DVI+WN+I+ + + + + LF
Sbjct: 184 VFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSE 243
Query: 107 MPVKNIVSWNCMIAGCIDNDRID--------DAFDYFQAMPE-RNTATY----------- 146
M + ++ N+R D A +A+P+ + +Y
Sbjct: 244 MSM--------IVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAF 295
Query: 147 --NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
NA+I + K G + +A ++F M ++V+S+ AM+ G+ + G A L + M +N
Sbjct: 296 VCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKEN 355
Query: 205 ----VVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLEN-- 256
V++W+ +I GY + EA + F +M + N + ++++ +G L
Sbjct: 356 IPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGM 415
Query: 257 ---------------------------------------------ARLLFERI--QPKDC 269
AR +F+ I + ++
Sbjct: 416 EIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNV 475
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMD--MQPDDATLVSVFTACSALQLLNEGRQSH 327
V++ MI GYAQ G + +AL++FS MI + P+ T+ + AC+ L L G+Q H
Sbjct: 476 VTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIH 535
Query: 328 VLVIRNG-FEANVS-VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
V R+ +E +V V N +I MYS+CG + + F + N VSW ++++ + HG
Sbjct: 536 AYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGR 595
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
++AL F +M GF PD I+FL LL AC H+G V++ ++ F++M + Y ++ S+EHY
Sbjct: 596 GKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYA 655
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C++D+L+R G+L+KAW+ Q MP E +W +LL+AC ++ NVEL E A K+ + +
Sbjct: 656 CVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAE 715
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
N Y ++SN+YA A W+DV R+R LMK+ G+ K+ SW++ F GD SHP
Sbjct: 716 NDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPL 775
Query: 566 IDKIHLELKR 575
+I+ L+R
Sbjct: 776 SPEIYSLLER 785
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 164/339 (48%), Gaps = 54/339 (15%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV- 205
+++ +L G ++A + E++ + + ++ +K+G +D+A +S M
Sbjct: 87 TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146
Query: 206 -----VSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENAR 258
+ + + G + + +C R L + ++ NVFV A++ + + G LE+A
Sbjct: 147 PDHFTLPYALKACGELPS--YCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204
Query: 259 LLFERIQPK---DCVSFNAMIAGYAQNGVAEEALRLFSGMIKM------DMQPDDATLVS 309
L+F+ I K D +S+N+++A + + AL LFS M + + + D ++V+
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ AC++L+ L + ++ H IRNG A+ VCNA+I Y++CG + D+ F + +
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324
Query: 370 LVSWN-----------------------------------TIIAAFAQHGHYEKALIFFS 394
+VSWN +IA +AQ G ++AL F
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
QM L+G +P+ +T +SLLSAC G +++ M++ +K
Sbjct: 385 QMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLK 423
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 185/412 (44%), Gaps = 72/412 (17%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRR---NVISYTAMLDGFMKKGEVDKARAL 196
E N NA+++ + + G LE+A+ +F+++ R+ +VIS+ +++ +K A L
Sbjct: 181 ESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALEL 240
Query: 197 ----------------SDYMSFKNVV----------------SWTV-------------M 211
SD +S N++ S+ + +
Sbjct: 241 FSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNAL 300
Query: 212 ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ----PK 267
I Y K +A ++F M K+V AM+TG+ + G A LFE ++ P
Sbjct: 301 IDTYAKCGSMNDAVKVFNVME--FKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPL 358
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
D ++++A+IAGYAQ G ++EAL F MI +P+ T++S+ +AC++L L++G + H
Sbjct: 359 DVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIH 418
Query: 328 VLVIRNGF------------EANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSW 373
++ ++ V NA+I MYS+C + F I N+V+W
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTW 478
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGF--DPDGITFLSLLSACGHAGKVNESMDLFELM 431
+I +AQ+G AL FS+M + P+ T +L AC H + + +
Sbjct: 479 TVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYV 538
Query: 432 VKVYGIIPSSEHYT-CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ + PS CL+D+ S+ G ++ A + MP + W S+++
Sbjct: 539 TRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVS-WTSMMSG 589
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 122/248 (49%), Gaps = 11/248 (4%)
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
T ++ + G ++A + ER+ P V +N ++ + + G + A+ + M++ +
Sbjct: 87 TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD TL AC L GR H L+ NGFE+NV VCNA++ MYSRCG + D+ L
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLV 206
Query: 362 FRQIHSP---NLVSWNTIIAAFAQHGHYEKALIFFSQMGL------NGFDPDGITFLSLL 412
F +I +++SWN+I+AA + + AL FS+M + D I+ +++L
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNIL 266
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC + + ++ ++ G + L+D ++ G + A ++ M F+ D
Sbjct: 267 PACASLKALPQIKEIHSYAIR-NGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFK-D 324
Query: 473 TGVWGSLL 480
W +++
Sbjct: 325 VVSWNAMV 332
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 15/157 (9%)
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
S+ V+ Y CG D+ ++ V WN ++ + GH ++A+ +M
Sbjct: 84 SLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRA 143
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP----SSEHYTC--LVDILSR 453
G PD T L ACG + + ++G+I S + C LV + SR
Sbjct: 144 GTKPDHFTLPYALKACGE-------LPSYCCGRALHGLICCNGFESNVFVCNALVAMYSR 196
Query: 454 AGQLEKAWQITQGMPFEA--DTGVWGSLLAACVINLN 488
G LE A + + + D W S++AA V N
Sbjct: 197 CGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSN 233
>gi|255587181|ref|XP_002534168.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525755|gb|EEF28217.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 513
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 232/358 (64%), Gaps = 2/358 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA +S ++ G I+ AR++FD+M K+ I+WN ++ Y QNG +++++ LF+S ++V
Sbjct: 154 NAMLSGYAQNGFIAEAREIFDEMPVKNSISWNGLLAAYVQNGRIEDARRLFESKMDWDVV 213
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWNC++ G + R+ DA F +P R+ ++N MI+G+ ++G LEEA +LFE+ P ++
Sbjct: 214 SWNCLMGGFVKKKRLVDARRVFDRIPVRDEVSWNTMITGYAQNGELEEARKLFEESPTQD 273
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++TAM+ G+++ G VD+AR++ D M KN VSW MI GYV+ +R A+ELF MP
Sbjct: 274 VFTWTAMVSGYVQNGMVDEARSIFDKMPEKNSVSWNAMIAGYVQCKRMDMAKELFEAMP- 332
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+N+ MITG+ + G + +AR LF+R+ +D +S++AMIAGY QNG EEA+ L+
Sbjct: 333 -FRNISSWNTMITGYAQSGNVPHARNLFDRMPQRDSISWSAMIAGYVQNGCNEEAVHLYV 391
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + ++ SV TAC+ + L+ G+Q H +++ G++ V NA++ MY +CG
Sbjct: 392 EMKRDGESLNRSSFTSVLTACADIAALDLGKQFHGWLVKVGYQTGCYVGNALLAMYCKCG 451
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
I +++ AF +I +L+SWNT+I +A+HG ++ALI F M G PD T +++
Sbjct: 452 SIDEADDAFHEITDKDLISWNTMIYGYARHGFGKEALIVFESMKTVGVKPDEATMVTV 509
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 216/385 (56%), Gaps = 18/385 (4%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N I+ R G+ +A Q+F+ M + +T+NA+I+GY NG ++ +F MP +++
Sbjct: 61 NMAITTHMRNGQCHSALQVFNTMPRRSTVTYNAMISGYLSNGRFDLAREMFDKMPERDLF 120
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
+WN M++G + N + DA F+ MP R+ ++NAM+SG+ ++G + EA +F++MP +N
Sbjct: 121 TWNVMLSGYVRNKNLTDARGLFERMPRRDVVSWNAMLSGYAQNGFIAEAREIFDEMPVKN 180
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
IS+ +L +++ G ++ AR L + +VVSW ++ G+VK +R +AR +F R+P
Sbjct: 181 SISWNGLLAAYVQNGRIEDARRLFESKMDWDVVSWNCLMGGFVKKKRLVDARRVFDRIPV 240
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D+ + MITG+ + G LE AR LFE +D ++ AM++GY QNG+ +EA +F
Sbjct: 241 RDEVSW--NTMITGYAQNGELEEARKLFEESPTQDVFTWTAMVSGYVQNGMVDEARSIFD 298
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA----NVSVCNAVITMY 349
M + + +A +++ + C + + E FEA N+S N +IT Y
Sbjct: 299 KMPEKNSVSWNA-MIAGYVQCKRMDMAKE-----------LFEAMPFRNISSWNTMITGY 346
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++ G + + F ++ + +SW+ +IA + Q+G E+A+ + +M +G + +F
Sbjct: 347 AQSGNVPHARNLFDRMPQRDSISWSAMIAGYVQNGCNEEAVHLYVEMKRDGESLNRSSFT 406
Query: 410 SLLSACGHAGKVNESMDLFELMVKV 434
S+L+AC ++ +VKV
Sbjct: 407 SVLTACADIAALDLGKQFHGWLVKV 431
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 140/268 (52%), Gaps = 33/268 (12%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
TQ VF A +S + G + AR +FD+M K+ ++WNA+I GY Q + +K LF++
Sbjct: 271 TQDVFTWTAMVSGYVQNGMVDEARSIFDKMPEKNSVSWNAMIAGYVQCKRMDMAKELFEA 330
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
MP +NI SWN MI G + + A + F MP+R++ +++AMI+G++++G EEA L+
Sbjct: 331 MPFRNISSWNTMITGYAQSGNVPHARNLFDRMPQRDSISWSAMIAGYVQNGCNEEAVHLY 390
Query: 167 EQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
+M R N S+T++L +D + W V +
Sbjct: 391 VEMKRDGESLNRSSFTSVLTACADIAALDLGKQFH---------GWLVKV---------- 431
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
Y +V A++ +CK G ++ A F I KD +S+N MI GYA++
Sbjct: 432 ----------GYQTGCYVGNALLAMYCKCGSIDEADDAFHEITDKDLISWNTMIYGYARH 481
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSV 310
G +EAL +F M + ++PD+AT+V+V
Sbjct: 482 GFGKEALIVFESMKTVGVKPDEATMVTV 509
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 280/515 (54%), Gaps = 32/515 (6%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGC-IDNDRIDDAFDYFQAM 138
DV N +I Y + GF++ ++ +F MPV+++VSWN M++G ID D + + + +
Sbjct: 158 DVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEML 217
Query: 139 PERNTATYNAMISGF--------LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
N A MIS L+ G +E ++ +++ T+++D + K G+V
Sbjct: 218 RLGNKADRFGMISALGACSIEHCLRSG-MEIHCQVIRSELELDIMVQTSLIDMYGKCGKV 276
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFC-EARELFYRMPDYDKN------------ 237
D A + + + KN+V+W MI G ++++ + + +P ++
Sbjct: 277 DYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGF 336
Query: 238 ---------VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+ + TA++ + K G L+ A +F ++ K+ VS+N M+A Y QN +EA
Sbjct: 337 AIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEA 396
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
L++F ++ ++PD T+ SV A + L +EG+Q H +++ G +N + NA++ M
Sbjct: 397 LKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYM 456
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y++CG + + F + ++VSWNT+I A+A HG ++ FFS+M GF P+G TF
Sbjct: 457 YAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTF 516
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
+SLL+AC +G ++E F M YGI P EHY C++D+L R G L++A + MP
Sbjct: 517 VSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMP 576
Query: 469 FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTR 528
+WGSLLAA + +V L ELAA+ + L N+ YV+LSN+YA AG W DV R
Sbjct: 577 LVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDR 636
Query: 529 VRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
++ LMKEQG+ K S ++I + F+ D SH
Sbjct: 637 IKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSH 671
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 205/457 (44%), Gaps = 67/457 (14%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN----- 116
+G + A +F++M D WN II GY NG QE+ + + M + I S N
Sbjct: 70 ESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPF 129
Query: 117 ----------CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
M+ + I FD + N +I +LK G +E A ++F
Sbjct: 130 VIKACGELLALMVGQKVHGKLIKIGFDL-------DVYVCNFLIDMYLKIGFIELAEKVF 182
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF----- 221
++MP R+++S+ +M+ G+ G+ LS M FK M+ K +RF
Sbjct: 183 DEMPVRDLVSWNSMVSGYQIDGD-----GLSSLMCFKE------MLRLGNKADRFGMISA 231
Query: 222 ---CEARELFYR---------MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
C + + ++ V T++I + K G ++ A +F RI K+
Sbjct: 232 LGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNI 291
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V++NAMI G ++ + PD T++++ +CS L EG+ H
Sbjct: 292 VAWNAMIGGMQEDD---------------KVIPDVITMINLLPSCSQSGALLEGKSIHGF 336
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
IR F + + A++ MY +CG + +E F Q++ N+VSWNT++AA+ Q+ Y++A
Sbjct: 337 AIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEA 396
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F + PD IT S+L A +E + ++K+ G+ ++ +V
Sbjct: 397 LKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKL-GLGSNTFISNAIVY 455
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ ++ G L+ A + GM + D W +++ A I+
Sbjct: 456 MYAKCGDLQTAREFFDGMVCK-DVVSWNTMIMAYAIH 491
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 180/397 (45%), Gaps = 64/397 (16%)
Query: 134 YFQAMPERNTATYNAMI-------SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
Y A PE+N A S F+K + + + F+ + R N ++ T L GF++
Sbjct: 14 YKNASPEQNKPPKAAQFKRKTTRKSPFIKRAQSKTS---FKPLARPNDLNITRDLCGFVE 70
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP-------------- 232
G + A + + M+ + W V+I GY N F EA + +YRM
Sbjct: 71 SGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFV 130
Query: 233 -----------------------DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
+D +V+V +I + K+G +E A +F+ + +D
Sbjct: 131 IKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDL 190
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+N+M++GY +G +L F M+++ + D ++S ACS L G + H
Sbjct: 191 VSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQ 250
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
VIR+ E ++ V ++I MY +CG + +E F +I+S N+V+WN +I + +K
Sbjct: 251 VIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQED---DKV 307
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
+ PD IT ++LL +C +G + E + ++ +P T LVD
Sbjct: 308 I------------PDVITMINLLPSCSQSGALLEGKSIHGFAIRKM-FLPYLVLETALVD 354
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ + G+L+ A + M E + W +++AA V N
Sbjct: 355 MYGKCGELKLAEHVFNQMN-EKNMVSWNTMVAAYVQN 390
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/617 (28%), Positives = 306/617 (49%), Gaps = 109/617 (17%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
+AG I +AR+LFD M + V+++ ++ + G ++++ L++ P+ ++ + MIAG
Sbjct: 160 KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAG 219
Query: 122 CIDNDRIDDAFDYFQAM------P----------------------------------ER 141
+ N+ DA F M P ++
Sbjct: 220 FVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDK 279
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
N N++I+ +L+ G + A R+F++M R+V+S+TA+LD + + G+++ AR + D M
Sbjct: 280 NLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP 339
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PDY--------------------- 234
+N VSW ++ + + EA L+ +M P+
Sbjct: 340 ERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRK 399
Query: 235 ----------DKNVFVVTAMITGFCKVGMLENARL------------------------- 259
NVFV +A+I +CK L +A++
Sbjct: 400 IHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSK 459
Query: 260 ------LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
LF+++ ++ S+N++I+GYAQN +AL+ F M+ P + T SV A
Sbjct: 460 MVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLA 519
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
C++L L G+ H +I+ G + ++ V A+ MY++ G + S+ F ++ N V+W
Sbjct: 520 CASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAW 579
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+I A++G E++++ F M G P+ TFL++L AC H+G V +M FE+M +
Sbjct: 580 TAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMM-Q 638
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
GI P ++HYTC+VD+L+RAG L +A + + +++ W +LL+AC I N E+GE
Sbjct: 639 ACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGE 698
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
AAK+++ELD N+A YV+LSN+YA+ G W+D +R+LMK + K SW++I +
Sbjct: 699 RAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRGQY 758
Query: 554 HYFLGGDMSHPCIDKIH 570
F + HP + ++
Sbjct: 759 QAFFSWETKHPLLPDVY 775
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 211/438 (48%), Gaps = 44/438 (10%)
Query: 83 TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN 142
++ ++ + + G + ++ LF MP +++VS+ M+ + + DA + ++ P +
Sbjct: 150 AYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCS 209
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQM----PRRNVISYTAMLDGFMKKGEVDKAR---- 194
+ AMI+GF+ + ++A +F +M N I+ +++ + GE D A
Sbjct: 210 VPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVG 269
Query: 195 -ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
A+ + KN+ +IT Y++ AR +F M D V TA++ + ++G
Sbjct: 270 LAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRD--VVSWTALLDVYAELGD 327
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
LE AR + + + ++ VS+ ++A + Q G A+EA+ L+S M+ +P+ + SV A
Sbjct: 328 LEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGA 387
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA------------ 361
C++LQ L GR+ H ++ NV V +A+I MY +C + D+++
Sbjct: 388 CASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCW 447
Query: 362 -------------------FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
F+++ + N+ SWN+II+ +AQ+ + AL F M +G
Sbjct: 448 NSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQS 507
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P ITF S+L AC + + ++K+ GI S T L D+ +++G L+ + +
Sbjct: 508 PGEITFSSVLLACASLCSLEMGKMVHAKIIKL-GIKESIFVGTALSDMYAKSGDLDSSKR 566
Query: 463 ITQGMPFEADTGVWGSLL 480
+ MP D W +++
Sbjct: 567 VFYEMPKRNDVA-WTAMI 583
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 178/396 (44%), Gaps = 36/396 (9%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
N +++ + VFV++A I + ++ A+ +F + K+++ WN++I+GY N +
Sbjct: 402 NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMV 461
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF----- 153
E++ LF+ MP +N+ SWN +I+G N + DA F AM + S
Sbjct: 462 EAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACA 521
Query: 154 ----LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
L+ G++ A ++ + + ++ TA+ D + K G++D ++ + M +N V+WT
Sbjct: 522 SLCSLEMGKMVHA-KIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWT 580
Query: 210 VMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ-- 265
MI G +N E+ LF M N A++ G++E+A FE +Q
Sbjct: 581 AMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQAC 640
Query: 266 ---PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
PK + M+ A+ G EA L ++K++ + + + ++ +AC+ +
Sbjct: 641 GISPK-AKHYTCMVDVLARAGHLAEAEDL---LLKIESKSEANSWAALLSACNIYRNKEM 696
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL-----VSWNTII 377
G ++ ++ + N + + MY+ CG D+ + NL SW I
Sbjct: 697 GERA-AKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQI- 754
Query: 378 AAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
G Y+ FFS + PD L LL+
Sbjct: 755 -----RGQYQA---FFSWETKHPLLPDVYEMLDLLT 782
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 143/328 (43%), Gaps = 42/328 (12%)
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
++ M+ +VK AR LF MP+ ++V T M+ K G + +A L+ +
Sbjct: 150 AYDFMVREHVKAGDIVSARRLFDGMPE--RSVVSYTTMVDALMKRGSVRDAVELYRQCPL 207
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
F AMIAG+ N + ++AL +F M+ + P++ TLVSV AC +
Sbjct: 208 CSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSI 267
Query: 327 HVLVIR-NGFEANVSVCNAVITMYSRCG---------------------GILD--SELA- 361
L ++ N + N+ V N++IT+Y R G +LD +EL
Sbjct: 268 VGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGD 327
Query: 362 -------FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
++ N VSW T++A Q G+ ++A+ +SQM +G P+ F S+L A
Sbjct: 328 LEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGA 387
Query: 415 CGHAGKVNESMDLFELMVKVY---GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
C + + +K+ + SS L+D+ + QL A I +P +
Sbjct: 388 CASLQDLRSGRKIHNQTLKMACSNNVFVSS----ALIDMYCKCKQLPDAQMIFYSLP-QK 442
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKM 499
+ W SL++ N + E KKM
Sbjct: 443 NIVCWNSLISGYSNNSKMVEAEELFKKM 470
>gi|356519676|ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 728
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 300/561 (53%), Gaps = 45/561 (8%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID- 124
I A +F+++ + + W+ ++ GY + + ++ ++F+ MPV+++V+W +I+G
Sbjct: 158 IREAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGYAKR 217
Query: 125 NDRIDDAFDYFQAMPE---------------RNTATYNAMISGFLKHG------------ 157
D + A D F M R A + +G + HG
Sbjct: 218 EDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDFDNS 277
Query: 158 -------------RLEEATRLFEQMPRRNVISYT-AMLDGFMKKGEVDKARALSDYMSFK 203
+++A R++E M + ++ +++ G + KG +++A + +
Sbjct: 278 IGGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYELRET 337
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
N VS+ +MI GY + +F +++ LF +M +N+ + MI+ + K G L+ A LF++
Sbjct: 338 NPVSYNLMIKGYAMSGQFEKSKRLFEKMSP--ENLTSLNTMISVYSKNGELDEAVKLFDK 395
Query: 264 IQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ ++ VS+N+M++GY NG +EAL L+ M ++ + +T +F ACS L +
Sbjct: 396 TKGERNYVSWNSMMSGYIINGKYKEALNLYVAMRRLSVDYSRSTFSVLFRACSCLCSFRQ 455
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+ H +I+ F+ NV V A++ YS+CG + +++ +F I SPN+ +W +I +A
Sbjct: 456 GQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNVAAWTALINGYAY 515
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG +A++ F M G P+ TF+ +LSAC HAG V E + +F M + YG+ P+ E
Sbjct: 516 HGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHSMQRCYGVTPTIE 575
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
HYTC+VD+L R+G L++A + MP EAD +WG+LL A ++E+GE AA+K+ L
Sbjct: 576 HYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALLNASWFWKDMEVGERAAEKLFSL 635
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
DP +V+LSN+YA G W T++R ++ + K SWIE+ NK+H F D +
Sbjct: 636 DPNPIFAFVVLSNMYAILGRWGQKTKLRKRLQSLELRKDPGCSWIELNNKIHLFSVEDKT 695
Query: 563 HPCIDKIHLELKRASVQMKSV 583
H D I+ ++ + + S+
Sbjct: 696 HLYSDVIYATVEHITATINSI 716
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 191/429 (44%), Gaps = 68/429 (15%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N+ I L G+I A +F ++ + +++N +I GY +G ++SK LF+ M +N
Sbjct: 310 VANSLIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPEN 369
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYF-QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+ S N MI+ N +D+A F + ERN ++N+M+SG++ +G+ +EA L+ M
Sbjct: 370 LTSLNTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAM- 428
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
RR + Y+ + RA S SF+ G + + +
Sbjct: 429 RRLSVDYSRSTFSVL-------FRACSCLCSFRQ---------GQLLHAHLIKT------ 466
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+ NV+V TA++ + K G L A+ F I + ++ A+I GYA +G+ EA+
Sbjct: 467 --PFQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNVAAWTALINGYAYHGLGSEAIL 524
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
LF M+ + P+ AT V V +AC+ L+ EG + +
Sbjct: 525 LFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLR-------------------IFHSMQ 565
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
RC G+ +P + + ++ + GH ++A F +M + + DGI + +
Sbjct: 566 RCYGV-----------TPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPI---EADGIIWGA 611
Query: 411 LLSAC--GHAGKVNE--SMDLFELMVK-VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
LL+A +V E + LF L ++ + S Y IL R GQ K + Q
Sbjct: 612 LLNASWFWKDMEVGERAAEKLFSLDPNPIFAFVVLSNMYA----ILGRWGQKTKLRKRLQ 667
Query: 466 GMPFEADTG 474
+ D G
Sbjct: 668 SLELRKDPG 676
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 187/394 (47%), Gaps = 32/394 (8%)
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V N++S N IA ++++A F MP R +++N MISG+ GR EA L
Sbjct: 38 VGNVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSF 97
Query: 169 MPRR----NVISYTAMLDGFMKKG------EVDKARALSDYMSFKNVVSWTVMITGYVKN 218
M R N +S++A+L + G +V S Y F V S + +
Sbjct: 98 MHRSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCG 157
Query: 219 ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
R EA +F + D N + + M+ G+ K M+++A +FE++ +D V++ +I+G
Sbjct: 158 IR--EAEVVFEELR--DGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISG 213
Query: 279 YAQ-NGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
YA+ E AL LF M + ++ P++ TL V C+ L +L G+ H L I+ G +
Sbjct: 214 YAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLD 273
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ S+ AV Y C I D++ + + +L N++I G E+A + F +
Sbjct: 274 FDNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYE 333
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL---VDILS 452
+ + + +++ ++ +G+ +S LFE M S E+ T L + + S
Sbjct: 334 LR----ETNPVSYNLMIKGYAMSGQFEKSKRLFEKM--------SPENLTSLNTMISVYS 381
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ G+L++A ++ E + W S+++ +IN
Sbjct: 382 KNGELDEAVKLFDKTKGERNYVSWNSMMSGYIIN 415
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 117/532 (21%), Positives = 207/532 (38%), Gaps = 140/532 (26%)
Query: 43 RLFSTQY---------VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQ 93
RLF+T V N I+ + GK+ AR LFDQM + V +WN +I+GY
Sbjct: 25 RLFTTHLQTTEPHVGNVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSL 84
Query: 94 NGFLQESKNLF----QSMPVKNIVSWNCMIAGCIDNDR---------------------- 127
G E+ L +S N VS++ +++ C +
Sbjct: 85 LGRYPEALTLVSFMHRSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLV 144
Query: 128 -------------IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
I +A F+ + + N ++ M++G++K +++A +FE+MP R+V
Sbjct: 145 GSALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDV 204
Query: 175 ISYTAMLDGFMKK------------------------------------------GEVDK 192
+++T ++ G+ K+ G+V
Sbjct: 205 VAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVH 264
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
+ + F N + V Y E +A+ ++ M ++ V ++I G G
Sbjct: 265 GLCIKGGLDFDNSIGGAV-TEFYCGCEAIDDAKRVYESMGG-QASLNVANSLIGGLVSKG 322
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+E A L+F ++ + VS+N MI GYA +G E++ RLF M P+
Sbjct: 323 RIEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRLFE-----KMSPE--------- 368
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLV 371
N++ N +I++YS+ G + ++ F + N V
Sbjct: 369 -------------------------NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNYV 403
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
SWN++++ + +G Y++AL + M D TF L AC + L +
Sbjct: 404 SWNSMMSGYIINGKYKEALNLYVAMRRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHL 463
Query: 432 VKVYGIIPSSEHY---TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+K P + T LVD S+ G L +A Q + F + W +L+
Sbjct: 464 IKT----PFQVNVYVGTALVDFYSKCGHLAEA-QRSFISIFSPNVAAWTALI 510
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 224/520 (43%), Gaps = 76/520 (14%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
+VI+ N I ++ G L+E+++LF MP + + SWN MI+G R +A M
Sbjct: 40 NVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMH 99
Query: 140 ER----NTATYNAMISGFLKHGR-----------------------------------LE 160
N +++A++S + G +
Sbjct: 100 RSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGIR 159
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
EA +FE++ N + ++ ML G++K+ +D A + + M ++VV+WT +I+GY K E
Sbjct: 160 EAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGYAKRED 219
Query: 221 FCE-ARELF---YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
CE A +LF R + N F + ++ ++G+L +++ + K + F+ I
Sbjct: 220 GCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVV-HGLCIKGGLDFDNSI 278
Query: 277 AG-----YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR-QSHVLV 330
G Y ++A R++ M +L+ L+++GR + LV
Sbjct: 279 GGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLIG--------GLVSKGRIEEAELV 330
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
E N N +I Y+ G S+ F ++ NL S NT+I+ ++++G ++A+
Sbjct: 331 FYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPENLTSLNTMISVYSKNGELDEAV 390
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F + + + +++ S++S GK E+++L+ M ++ + S ++ L
Sbjct: 391 KLFDK---TKGERNYVSWNSMMSGYIINGKYKEALNLYVAMRRL-SVDYSRSTFSVLFRA 446
Query: 451 LS-----RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA--KKMRELD 503
S R GQL A I PF+ + V +L ++ + G LA + +
Sbjct: 447 CSCLCSFRQGQLLHAHLIKT--PFQVNVYVGTAL-----VDFYSKCGHLAEAQRSFISIF 499
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
N A + L N YA G+ + + M QG+ A
Sbjct: 500 SPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAA 539
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 160/361 (44%), Gaps = 47/361 (13%)
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
+NERF + NV I K+G LE AR LF+++ + S+N MI
Sbjct: 20 RNERFRLFTTHLQTTEPHVGNVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMI 79
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+GY+ G EAL L S M + + ++ + +V +AC+ G+Q H L++++G+E
Sbjct: 80 SGYSLLGRYPEALTLVSFMHRSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYE 139
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
V +A++ C GI ++E+ F ++ N V W+ ++A + + + A+ F +M
Sbjct: 140 RFGLVGSALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKM 199
Query: 397 GLNGFDPDGITFLSLLSACGHAGK---VNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+ D + + +L+S G+A + ++DLF M + ++P+ C+V + +R
Sbjct: 200 PVR----DVVAWTTLIS--GYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCAR 253
Query: 454 AGQL-----------------------------------EKAWQITQGMPFEADTGVWGS 478
G L + A ++ + M +A V S
Sbjct: 254 LGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANS 313
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
L+ V +E EL ++RE +P + Y ++ YA +G + R+ M + +
Sbjct: 314 LIGGLVSKGRIEEAELVFYELRETNPVS---YNLMIKGYAMSGQFEKSKRLFEKMSPENL 370
Query: 539 T 539
T
Sbjct: 371 T 371
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V+V A + S+ G ++ A++ F + + +V W A+I GY +G E+ LF+SM
Sbjct: 472 VYVGTALVDFYSKCGHLAEAQRSFISIFSPNVAAWTALINGYAYHGLGSEAILLFRSMLH 531
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLE 160
V N ++ +++ C + + F +M T Y ++ + G L+
Sbjct: 532 QGIVPNAATFVGVLSACNHAGLVCEGLRIFHSMQRCYGVTPTIEHYTCVVDLLGRSGHLK 591
Query: 161 EATRLFEQMP-RRNVISYTAMLDG--FMKKGEVDKARA 195
EA +MP + I + A+L+ F K EV + A
Sbjct: 592 EAEEFIIKMPIEADGIIWGALLNASWFWKDMEVGERAA 629
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 202/641 (31%), Positives = 303/641 (47%), Gaps = 114/641 (17%)
Query: 21 LRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRAGKISAARQLFDQ 75
L ++S C + + SS I +Y F+ N+ I+ + G +S+AR LFD
Sbjct: 233 LSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDS 292
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF 135
+ D ++ N +++GY + L+ ++ LF MP + VS+ MI G ND +A + F
Sbjct: 293 CSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVF 352
Query: 136 QAMPERNTATYN----------------------------------AMISGFLKH----- 156
+ M A +IS L H
Sbjct: 353 KDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVF 412
Query: 157 GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYV 216
L++ RLF +MP RN +S+ ML G++K G VD+AR L + + ++V SW +MI G+V
Sbjct: 413 SSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFV 472
Query: 217 KNERFCEARELFYRMPDYD--------------------------------KNVFV---- 240
+ +R +A L+ M D KN FV
Sbjct: 473 QMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDF 532
Query: 241 VTAMITGF---CK------------------------VGMLEN-----ARLLFERIQPKD 268
+ A I F C+ VG +N AR +F+ + KD
Sbjct: 533 IQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKD 592
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
S++ MI+GYAQN + + AL LF GMI ++P++ T+VSVF+A +AL L EGR +H
Sbjct: 593 VFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHE 652
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI--HSPNLVSWNTIIAAFAQHGHY 386
V N ++ A+I MY++CG I + FRQI + + WN II A HGH
Sbjct: 653 YVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHA 712
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
+L FS + + ITFL +LSAC HAG V F M +G+ P+ +HY C
Sbjct: 713 NLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGC 772
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
LVD+L R G+L +A +I + MP +AD +WG+LLA+ + VE+GE AA+ + L P +
Sbjct: 773 LVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPSH 832
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
V+LSNLYA AG+W D VR ++ Q + + YS +
Sbjct: 833 GPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYSGV 873
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 37/172 (21%)
Query: 301 QPDDATL------VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
QP ++L VS C++ ++ G+Q H +V++ GF +N + N++I MY +CG
Sbjct: 223 QPSSSSLDCELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGL 282
Query: 355 ILDSELAF---------------------RQIHSP----------NLVSWNTIIAAFAQH 383
+ + L F RQ+ + VS+ T+I AQ+
Sbjct: 283 LSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQN 342
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+ +A+ F M G P+ +T S++SAC H G + L L++K++
Sbjct: 343 DCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLH 394
>gi|8920616|gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810
from Arabidopsis thaliana BAC F19I3 gb|AC004238. It
contains a PPR repeat domain PF|01535. ESTs gb|AV539170,
gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and
gb|AV533492 come from this gene [Arabidopsis thaliana]
Length = 864
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 295/560 (52%), Gaps = 53/560 (9%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N ++ L R G + A+Q+FD M ++DV++WNA+I GY +N ++E+K LF M KN+V
Sbjct: 276 NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV 335
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR-- 171
+W M+ G + +A+ F MPERN ++ AMISGF + EA LF +M +
Sbjct: 336 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDV 395
Query: 172 -------RNVISYTAMLDG----FMKKGEVDKARALS--------DYMSFKNVV------ 206
+IS G F + GE A+ +S D K++V
Sbjct: 396 DAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASS 455
Query: 207 -----------------SWTVMITGYVKNERFCEARELFYRMPD-YDKNVFVVTAMITGF 248
S ++I Y+KN A LF R+ +DK + T+MI G+
Sbjct: 456 GLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSW--TSMIDGY 513
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
+ G + A LF+++ KD V++ MI+G QN + EA L S M++ ++P ++T
Sbjct: 514 LEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYS 573
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNG--FEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+ ++ A L++G+ H ++ + ++ ++ + N++++MY++CG I D+ F ++
Sbjct: 574 VLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMV 633
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+ VSWN++I + HG +KAL F +M +G P+ +TFL +LSAC H+G + ++
Sbjct: 634 QKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLE 693
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LF+ M + Y I P +HY ++D+L RAG+L++A + +PF D V+G+LL C +N
Sbjct: 694 LFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLN 753
Query: 487 LNVE----LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
+ + E AA ++ ELDP N+ +V L N+YA G +R M +GV K
Sbjct: 754 WRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTP 813
Query: 543 AYSWIEIGNKVHYFLGGDMS 562
SW+ + + + FL GD S
Sbjct: 814 GCSWVVVNGRANVFLSGDKS 833
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 228/441 (51%), Gaps = 49/441 (11%)
Query: 64 GKISAARQLFDQMTTKD----VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
G + AR L D++ + V+ W ++++ Y + G+L E++ LF+ MP +NIV+ N M+
Sbjct: 159 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 218
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
G + R+++A+ F+ MP +N ++ M++ GR E+A LF++MP RNV+S+
Sbjct: 219 TGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNT 277
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
++ G ++ G+++KA+ + D M ++VVSW MI GY++N+ EA+ LF M +KNV
Sbjct: 278 LVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS--EKNVV 335
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-M 298
T+M+ G+C+ G + A LF + ++ VS+ AMI+G+A N + EAL LF M K +
Sbjct: 336 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDV 395
Query: 299 D-MQPDDATLVSVFTACSAL--QLLNEGRQSHVLVIRNGFEA------------------ 337
D + P+ TL+S+ AC L + G Q H VI NG+E
Sbjct: 396 DAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASS 455
Query: 338 --------------NVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQ 382
++ CN +I Y + G + +E F ++ S + VSW ++I + +
Sbjct: 456 GLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLE 515
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G +A F ++ D DG+T+ ++S E+ L MV+ G+ P +
Sbjct: 516 AGDVSRAFGLFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC-GLKPLNS 570
Query: 443 HYTCLVDILSRAGQLEKAWQI 463
Y+ L+ L++ I
Sbjct: 571 TYSVLLSSAGATSNLDQGKHI 591
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 219/467 (46%), Gaps = 51/467 (10%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L + + + NA ++ + +++ A LF +M K+V++W ++T +G +++
Sbjct: 202 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDA 260
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
LF MP +N+VSWN ++ G I N ++ A F AMP R+ ++NAMI G++++ +E
Sbjct: 261 VELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGME 320
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
EA LF M +NV+++T+M+ G+ + G+V +A L M +N+VSWT MI+G+ NE
Sbjct: 321 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNEL 380
Query: 221 FCEARELFYRMPDYDKNVFVV-----TAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ EA LF M K+V V T + + G+ R L E++
Sbjct: 381 YREALMLFLEM---KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLH---------- 427
Query: 276 IAGYAQNG--VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG--RQSHVLVI 331
A NG + RL ++ M S SA LLNE QS ++I
Sbjct: 428 -AQVISNGWETVDHDGRLAKSLVHM--------YASSGLIASAQSLLNESFDLQSCNIII 478
Query: 332 ----RNG--------FEANVSVCNAV-----ITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+NG FE S+ + V I Y G + + F+++H + V+W
Sbjct: 479 NRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWT 538
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I+ Q+ + +A S M G P T+ LLS+ G +++ + ++ K
Sbjct: 539 VMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKT 598
Query: 435 YGII-PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
P LV + ++ G +E A++I M + DT W S++
Sbjct: 599 TACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMI 644
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 39 NCLIRLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
+C+I + Y + + N+ +S ++ G I A ++F +M KD ++WN++I G +G
Sbjct: 592 HCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHG 651
Query: 96 FLQESKNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----Y 146
++ NLF+ M N V++ +++ C + I + F+AM E + Y
Sbjct: 652 LADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHY 711
Query: 147 NAMISGFLKHGRLEEATRLFEQMP 170
+MI + G+L+EA +P
Sbjct: 712 ISMIDLLGRAGKLKEAEEFISALP 735
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/543 (31%), Positives = 277/543 (51%), Gaps = 47/543 (8%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID---------------NDRID 129
+I Y+ G + E++ LF MP +++V+W MIAG N+ +D
Sbjct: 47 TTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELD 106
Query: 130 -DAF---DYFQAMPERNTATYNAMISGF-LKHG--------------------RLEEATR 164
+AF +A +Y ++ G +KHG +++A
Sbjct: 107 PNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACM 166
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVKN 218
+F + +N +S+T ++ G+ + + + M + V S V + +
Sbjct: 167 VFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGS 226
Query: 219 ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
F E ++ N+ V+ +++ +C+ A F + +D +++N +IAG
Sbjct: 227 HTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAG 286
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
Y ++ E+L +FS M P+ T S+ AC+ L LN G+Q H +IR G + N
Sbjct: 287 YERSN-PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGN 345
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
+++ NA+I MYS+CG I DS F + +LVSW ++ + HG+ E+A+ F +M
Sbjct: 346 LALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVR 405
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+G PD + F+++LSAC HAG V+E + F+LMV Y I P E Y C+VD+L RAG++E
Sbjct: 406 SGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVE 465
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+A+++ + MPF+ D VWG L AC + LG+LAA ++ +L P + YVMLSN+YA
Sbjct: 466 EAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYA 525
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASV 578
A G W + R+R LMK G K+ SW+E+GN V+ F+ GD I+ I+ L+
Sbjct: 526 ADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLIG 585
Query: 579 QMK 581
MK
Sbjct: 586 HMK 588
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 159/338 (47%), Gaps = 42/338 (12%)
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
+P+ + T ++ + KG + +AR L D M ++VV+WTVMI GY A +F
Sbjct: 38 IPKGPSVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVF 97
Query: 229 YRM--PDYDKNVFVVTAMIT------------------------GF-------------C 249
M + D N F +++++ GF C
Sbjct: 98 CEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATC 157
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVS 309
V M ++A ++F I K+ VS+ +IAGY LR+F M+ +++ + +
Sbjct: 158 CVSM-DDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSI 216
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
AC+++ G Q H V ++GFE+N+ V N+++ MY RC ++ F +++ +
Sbjct: 217 AVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRD 276
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
L++WNT+IA + + E +L FS M GF P+ TF S+++AC +N +
Sbjct: 277 LITWNTLIAGYERSNPTE-SLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHG 335
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+++ G+ + L+D+ S+ G + + Q+ GM
Sbjct: 336 RIIR-RGLDGNLALSNALIDMYSKCGNIADSHQVFGGM 372
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 152/351 (43%), Gaps = 16/351 (4%)
Query: 49 YVFVNNAKISALSRAG-KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
+++V+NA + + + A +F + K+ ++W +I GY +F+ M
Sbjct: 143 FIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQM 202
Query: 108 PVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRL 159
++ N S++ + C A+ E N N+++ + +
Sbjct: 203 LLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCF 262
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS---FKNVVSWTVMITGYV 216
EA R F +M +R++I++ ++ G+ + + S S N ++T ++
Sbjct: 263 SEANRYFYEMNQRDLITWNTLIAGYERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACA 322
Query: 217 KNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+++ R+ D N+ + A+I + K G + ++ +F + +D VS+ A
Sbjct: 323 TLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTA 382
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRN 333
M+ GY +G EEA+ LF M++ ++PD +++ +ACS L++EG R ++V
Sbjct: 383 MMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDY 442
Query: 334 GFEANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
+ + V+ + R G + ++ EL P+ W + A H
Sbjct: 443 NISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAH 493
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/583 (30%), Positives = 310/583 (53%), Gaps = 27/583 (4%)
Query: 20 ILRILSTPDSCGNFTPHSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTT 78
IL+ S+PD +C +I+ + VFV + I+ +++G A ++FD M
Sbjct: 174 ILQACSSPDD--RILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGF 231
Query: 79 KDVITWNAIITGYWQNG----FLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDY 134
KD+ N +I Y + G ++ KNL ++ +I+ C + +++
Sbjct: 232 KDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEG-KQ 290
Query: 135 FQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG- 188
Q + + T+ NA+I+ + G +EA R+F M +N+IS+TA++ G+ + G
Sbjct: 291 LQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGY 350
Query: 189 ---EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK------NVF 239
VD L D + + + ++T + C EL ++ + +V
Sbjct: 351 GKKAVDAFLGLHDELG---INFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVN 407
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN-GVAEEALRLFSGMIKM 298
V TA++ + K L++AR++F+ + K SFNA++AG+ ++ G E+ + LF+ +
Sbjct: 408 VATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLA 467
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++PD T + + + L +GR H ++ GF+ N+SV N+VI+MY++CG I D+
Sbjct: 468 GVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDA 527
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F ++ + +SWN +I+A+A HG +K+L F +M GFDPD T L++L AC ++
Sbjct: 528 HQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYS 587
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G + + LF LM YGI P EHY C+ D+L RAG L +A I + PF T +W +
Sbjct: 588 GLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRT 647
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
L+ C ++ N+ G+LA+K + +L P + Y+++SN+YA+ M + +VR +M +
Sbjct: 648 LVNVCKLHGNLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDLKF 707
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
K+ SWIEI NKVH+F+ D HP +I+ L+ + +MK
Sbjct: 708 RKEAGSSWIEIDNKVHHFVASDKDHPESREIYTRLELLTDEMK 750
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/508 (22%), Positives = 237/508 (46%), Gaps = 31/508 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L++ S F N ++ + ++ A+++FD+M T++ ITW ++I GY ++ Q +
Sbjct: 93 LVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSA 152
Query: 101 KNLFQSMPV--KNIVSWNCMI---AGCIDNDRI-DDAFDYF--QAMPERNTATYNAMISG 152
++ M +N C + A +DRI + F ++ + N ++I+
Sbjct: 153 FSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAM 212
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL-----------SDYMS 201
+ K G + A ++F+ M +++ M+ + + G KA + +DY +
Sbjct: 213 YTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDY-T 271
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
F N++S G + E + + L ++ + V A+IT + GM + A +F
Sbjct: 272 FTNIIS---TCNGDLGVEEGKQLQGLAFKY-GFLSETSVGNAIITMYGNSGMPKEAERMF 327
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVSVFTACSALQLL 320
+ K+ +S+ A+I+GY+++G ++A+ F G+ ++ + D L ++ CS L
Sbjct: 328 SSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNL 387
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
G Q H V++ G +V+V A++ +Y++C + + + F + + + S+N I+A F
Sbjct: 388 ELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGF 447
Query: 381 AQ-HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ G E +I F+Q+ L G PD +TF LLS + + + VK G
Sbjct: 448 LESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKT-GFDT 506
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+ ++ + ++ G +E A Q+ M D+ W +L++A ++ + ++M
Sbjct: 507 NISVANSVISMYAKCGSIEDAHQMFNIMNCR-DSISWNALISAYALHGQAQKSLFLFEEM 565
Query: 500 RE--LDPQNSAVYVMLSNLYAAAGMWRD 525
+ DP + +L +G+W+D
Sbjct: 566 KRKGFDPDEFTILAILQAC-TYSGLWKD 592
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 295/548 (53%), Gaps = 16/548 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV +A I S+ G+++ A ++F + DV+ W +IITGY QNG + + F M V
Sbjct: 139 MFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVV 198
Query: 110 KNIVSWNCMI-----AGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLE 160
VS + + + C + + R T N++++ + K G +
Sbjct: 199 LEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIR 258
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYV 216
A LF +MP +++IS+++M+ + G A L + M K N V+ +
Sbjct: 259 IAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACA 318
Query: 217 KNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+ E +++ +Y + ++ V TA++ + K ENA LF R+ KD VS+
Sbjct: 319 SSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAV 378
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+ +GYA+ G+A ++L +F M+ +PD LV + A S L ++ + H V ++G
Sbjct: 379 LFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSG 438
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F+ N + ++I +Y++C I ++ F+ + ++V+W++IIAA+ HG E+AL
Sbjct: 439 FDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSH 498
Query: 395 QMGLNG-FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
QM + P+ +TF+S+LSAC HAG + E + +F +MV Y ++P+ EHY +VD+L R
Sbjct: 499 QMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGR 558
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
G+L+KA + MP +A VWG+LL AC I+ N+++GELAA + LDP ++ Y +L
Sbjct: 559 MGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLL 618
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLEL 573
SN+Y W D ++R L+KE + K S +EI N+VH F+ D H D+I+ L
Sbjct: 619 SNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYEML 678
Query: 574 KRASVQMK 581
++ +M+
Sbjct: 679 RKLDARMR 686
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 231/482 (47%), Gaps = 24/482 (4%)
Query: 20 ILRILSTPDSCGNFTPHSSNCL-IRLFSTQYVFVNNAKISAL-SRAGKISAARQLFDQMT 77
++++L T S + T S CL + L +V K++ L +R + A +LF++
Sbjct: 7 LVKLLETCCSKISITQLHSQCLKVGLALDSFVVT---KLNVLYARYASLCHAHKLFEETP 63
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV-------SWNCMIAGCIDNDRIDD 130
K V WNA++ Y+ G E+ +LF M + + + + C +++
Sbjct: 64 CKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLEL 123
Query: 131 A---FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ + + + +A+I + K G++ +A ++F + P+ +V+ +T+++ G+ +
Sbjct: 124 GKMIHGFLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQN 183
Query: 188 GEVDKARALSDYMSF-----KNVVSWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFV 240
G + A A M + V+ + + F R + F + +D + +
Sbjct: 184 GSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCL 243
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
+++ + K G + A LF + KD +S+++M+A YA NG AL LF+ MI +
Sbjct: 244 ANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRI 303
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+ + T++S AC++ L EG+Q H L + GFE +++V A++ MY +C ++
Sbjct: 304 ELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIE 363
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++ ++VSW + + +A+ G K+L F M NG PD I + +L+A G
Sbjct: 364 LFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGI 423
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
V +++ L + K G + L+++ ++ ++ A ++ +G+ D W S++
Sbjct: 424 VQQALCLHAFVTK-SGFDNNEFIGASLIELYAKCSSIDNANKVFKGLR-HTDVVTWSSII 481
Query: 481 AA 482
AA
Sbjct: 482 AA 483
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 282/513 (54%), Gaps = 14/513 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV+ + + + G + A FDQ+ KD++ WN +ITGY QN + +E+ LF M +
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240
Query: 110 K----NIVSWNCMI--AGCIDNDRIDDAF--DYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ N ++ C++ + + + + F + + A++ + K +E+
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIED 300
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-RALSDYMSF---KNVVSWTVMITGYVK 217
R F +M +RN++S+ A++ G+ G+ ++A R S S + ++ + +
Sbjct: 301 VERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSV 360
Query: 218 NERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ E ++ + D +V V +++ + K G ++A FE I + V + +
Sbjct: 361 SSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGI 420
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+G+AQNG E+AL F M K + D+ + SV A S+ + +GR H V+++G
Sbjct: 421 ISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGL 480
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+ + V +AVI MYS+CG + D++ F + N+VSWN++I +AQ+G ++AL+ F +
Sbjct: 481 DCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQE 540
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M +G P +TF+ +L AC HAG V E + + LMV YGI PS EH TC+VD+L RAG
Sbjct: 541 MTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAG 600
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
LE+A F + G+WGSLL+AC ++ N ++G AA+ L+P S+ Y LSN
Sbjct: 601 YLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSN 660
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
+YA+ +W +V+R+R LMK+ GV K+ SWIE
Sbjct: 661 IYASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 153/518 (29%), Positives = 245/518 (47%), Gaps = 73/518 (14%)
Query: 12 LKRILFPPILRILSTPDSCGNFT----PHSSNCLI--RLFSTQYVFVNNAKISALSRAGK 65
L+ + P + +T +C T S +CLI + FS Q +FV++ IS S+ +
Sbjct: 33 LRAGIEPNAITYSATISACAQSTRPSLATSLHCLILKKGFSNQ-LFVSSGLISMYSKHDR 91
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDN 125
I AR LFD M +D ++WN++I GY Q G +E+ LF SM + + +W +++
Sbjct: 92 IKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSM-INSCENWKLLVS----- 145
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHG---RLEEATRLFEQMPRRNVISYTAMLD 182
D+ A + G HG ++ + LF V T +
Sbjct: 146 -------DFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLF-------VSGSTVYM- 190
Query: 183 GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD--- 233
+ K G +D A D + K++V+W MITGY +N EA ELFY+M P+
Sbjct: 191 -YCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTT 249
Query: 234 ----------------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+VFV TA++ + K +E+ F +
Sbjct: 250 FCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMS 309
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
++ VSFNA+I GY+ G EEALR++S + M+PD T V +F++CS + EG Q
Sbjct: 310 KRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQ 369
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL-AFRQIHSPNLVSWNTIIAAFAQHG 384
HV ++ G +++VSV N+++ YS+C G DS L AF I+ PN V W II+ FAQ+G
Sbjct: 370 VHVHSVKFGLDSDVSVGNSIVNFYSKC-GFTDSALEAFESINRPNSVCWAGIISGFAQNG 428
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
EKAL+ F +M D + S++ A V + L ++K G+ +
Sbjct: 429 EGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKS-GLDCTIYVG 487
Query: 445 TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ ++D+ S+ G +E A ++ MP E + W S++
Sbjct: 488 SAVIDMYSKCGMVEDAQKVFSVMP-EKNVVSWNSMITG 524
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 228/476 (47%), Gaps = 24/476 (5%)
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDA 131
M +V+ W + IT + G + ++ + F M N ++++ I+ C + R A
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 132 FDYFQAMPERNTATY----NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ ++ + + +IS + KH R++EA LF+ MP R+ +S+ +M+ G+ ++
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 188 GEVDKARALSDYMSFKNVVSWTVMIT-----------GYVKNERFCEARELFYRMPDYDK 236
G ++A L M + +W ++++ G + R + + +D
Sbjct: 121 GLNEEACGLFCSM-INSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDS 179
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
++FV + + +CK G+L+ A L F++I+ KD V++N MI GYAQN EEA+ LF M
Sbjct: 180 DLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQME 239
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+P+D T V A +A+ GR H V++ G +V V A++ MYS+ I
Sbjct: 240 LEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIE 299
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D E AF ++ NLVS+N +I ++ G YE+AL +SQ+ G +PD TF+ L S+C
Sbjct: 300 DVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCS 359
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
+ V E + VK +G+ +V+ S+ G + A + + + ++ W
Sbjct: 360 VSSTVAEGAQVHVHSVK-FGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSVCW 417
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
+++ N E + KMR+ + S++ A W V + R L
Sbjct: 418 AGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSS--SSVIKAVSSWAAVEQGRHL 471
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 176/369 (47%), Gaps = 36/369 (9%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L + VFV A + S+ I + F +M+ ++++++NA+ITGY G +E+
Sbjct: 273 VLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEA 332
Query: 101 KNLFQSMPVKNI----VSWNCMIAGC-IDNDRIDDAFDYFQAMP---ERNTATYNAMISG 152
++ + + + ++ + + C + + + A + ++ + + + N++++
Sbjct: 333 LRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNF 392
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE--------------VDKARALSD 198
+ K G + A FE + R N + + ++ GF + GE +DK S
Sbjct: 393 YSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSS 452
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR 258
K V SW V+ R A + D ++V +A+I + K GM+E+A+
Sbjct: 453 SSVIKAVSSWAA-----VEQGRHLHAHVM---KSGLDCTIYVGSAVIDMYSKCGMVEDAQ 504
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F + K+ VS+N+MI GYAQNG +EAL LF M + P T V + ACS
Sbjct: 505 KVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAG 564
Query: 319 LLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSE---LAFRQIHSPNLVSWN 374
L+ EGR + L++ N G ++ C ++ + R G + ++E L+ P + W
Sbjct: 565 LVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGI--WG 622
Query: 375 TIIAAFAQH 383
++++A H
Sbjct: 623 SLLSACGVH 631
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/590 (30%), Positives = 305/590 (51%), Gaps = 48/590 (8%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT 89
C H S ++++ + VF+ N I + G + ++F+ M+ ++V++W ++I
Sbjct: 148 CEGIQVHGS--VVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLIC 205
Query: 90 GYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCI---DNDRIDDAFDYFQAMPER- 141
GY + +E+ +LF M I V+ C+I+ C D D + Y + +
Sbjct: 206 GYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKL 265
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM- 200
N NA++ ++K G ++ A RLF++ RN++ Y +L + ++G +A A+ D M
Sbjct: 266 NKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEML 325
Query: 201 ---------SFKNVVSWTVMIT---------GYVKNERF----------------CEARE 226
+ + +S + + GYV C E
Sbjct: 326 QQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPE 385
Query: 227 LFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+ R+ D N VV+ ++ GF + G +E+A +F +I ++ V +N MI+G Q +
Sbjct: 386 MACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSL 445
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
E+A+ LF M ++ D T++ + +AC L + H + +NG ++ + A
Sbjct: 446 FEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTA 505
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ M++RCG + F ++ ++ +W I A G+ E A F+QM + G PD
Sbjct: 506 LVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPD 565
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+ F+ +L+AC H G+V + + +F LM + +GI P EHY C+VD+L RAG L +A+ +
Sbjct: 566 VVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLI 624
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
+ MP E + VWGSLLAAC ++ NVE+ AA+++ EL PQ + V+V+LSN+YA+AG W
Sbjct: 625 KSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWT 684
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
DV RVRL ++E+GV K S +++ +H F GD SHP + I L L+
Sbjct: 685 DVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQ 734
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 190/423 (44%), Gaps = 64/423 (15%)
Query: 98 QESKNLFQSMP--VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY--NAMISGF 153
Q +KN +P + +V+ IA D AF+ F+ + A + N++I G+
Sbjct: 47 QITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSLIRGY 106
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
G EA L+ +M V+ T N ++ +++
Sbjct: 107 SSAGLGREAILLYVRML---VLGVTP------------------------NHYTFPFVLS 139
Query: 214 GYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
G K FCE ++ + +++VF+ +I + + G +++ +FE + ++ VS
Sbjct: 140 GCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVS 199
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ ++I GYA+ +EA+ LF M++ ++P T+V V +AC+ L+ L+ G + +
Sbjct: 200 WTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIG 259
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
G + N + NA++ MY +CG I ++ F + NLV +NTI++ +A+ G +AL
Sbjct: 260 ELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALA 319
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHA-----GKV-----------------NESMDLF- 428
+M G PD +T LS +SA GKV N +D++
Sbjct: 320 ILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYM 379
Query: 429 -----ELMVKVYGIIPSSE--HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
E+ +V+ ++ + + L R G +E AW++ +P E + W ++++
Sbjct: 380 KCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIP-ERNAVFWNTMIS 438
Query: 482 ACV 484
V
Sbjct: 439 GLV 441
>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 763
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/565 (30%), Positives = 299/565 (52%), Gaps = 47/565 (8%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID- 124
I A +F+++ ++ + W+ ++ GY Q + ++ +F+ MPV+++V+W +I+G
Sbjct: 154 IREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKR 213
Query: 125 NDRIDDAFDYFQAMPE---------------RNTATYNAMISGFLKHG------------ 157
D + A D F M R A + G + HG
Sbjct: 214 EDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNS 273
Query: 158 -------------RLEEATRLFEQMPRRNVISYT-AMLDGFMKKGEVDKARALSDYMSFK 203
+++A R++E M + +++ G + G V +A + + K
Sbjct: 274 VSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDK 333
Query: 204 NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER 263
++S +MI GY + +F ++++LF +M K++ + MIT + K G L+ A LF++
Sbjct: 334 TLISNNLMIKGYAMSGQFKKSKKLFEKMSL--KHLTSLNTMITVYSKNGELDEAVKLFDK 391
Query: 264 IQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ ++CV++N+M++GY NG EAL+L+ M + ++ +T +F AC+ L +
Sbjct: 392 TKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQ 451
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G+ H + + ++ NV V A++ YS+CG + D++ +F I SPN+ +W +I +A
Sbjct: 452 GQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAY 511
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG +A+ F M G P+ TF+++LSAC HAG V+E + F M Y I P+ E
Sbjct: 512 HGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIE 571
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL-AACVINLNVELGELAAKKMRE 501
HYTC+VD+L R+G++++A + MP +AD +WG+LL A+C N NVELGE AA K+
Sbjct: 572 HYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWN-NVELGERAAVKLFS 630
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
LDP + + V LSN+YA G W T++R ++ + K +SWIE+ N VH F D
Sbjct: 631 LDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVHLFSVEDT 690
Query: 562 SHPCIDKIHLELKRASVQMKSVDDF 586
+HP D I+ ++ + + S+ F
Sbjct: 691 THPYSDVIYKTVEHITATINSIVPF 715
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 173/365 (47%), Gaps = 30/365 (8%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V ++ I L G++ A +F + K +I+ N +I GY +G ++SK LF+ M +K+
Sbjct: 306 VADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKH 365
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYF-QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+ S N MI N +D+A F + ERN T+N+M+SG++ +G EA +L+ M
Sbjct: 366 LTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTM- 424
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
RR ++ Y+ + RA + SF+ G + + +
Sbjct: 425 RRFLVEYSRSTFSVL-------FRACAYLCSFQQ---------GQLLHAHLAKT------ 462
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
Y +NV+V TA++ + K G L +A+ F I + ++ A+I GYA +G EA+
Sbjct: 463 --PYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAIS 520
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVLVIRNGFEANVSVCNAVITMY 349
F M+ + P+ AT V+V +ACS L++EG + H + I + V+ +
Sbjct: 521 RFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLL 580
Query: 350 SRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
R G + ++E Q+ + V W ++ A + E L + + L DP+ ++
Sbjct: 581 GRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVE--LGERAAVKLFSLDPNSVSA 638
Query: 409 LSLLS 413
L LS
Sbjct: 639 LVTLS 643
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/530 (22%), Positives = 234/530 (44%), Gaps = 72/530 (13%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNL---FQ 105
+V N I+ ++ GK+ AR +FD+M + V +WN +I+GY Q G E+ L
Sbjct: 36 HVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMH 95
Query: 106 SMPVK-NIVSWNCMIAGCIDNDRIDDAFD----YFQAMPERNTATYNAMISGFLKHGRLE 160
S VK N VS++ ++ C + F++ +R +A++ +++ +
Sbjct: 96 SSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIR 155
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
EA +FE++ N + ++ ML G++++ + A + + M ++VV+WT +I+GY K E
Sbjct: 156 EAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKRED 215
Query: 221 FCE-ARELFYRM-------PD-------------------------------YDKNVFVV 241
CE A +LF M P+ +D + V
Sbjct: 216 GCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVS 275
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSF-NAMIAGYAQNGVAEEALRLFSGMIKMDM 300
+A+ +C +++A+ ++E + + C + +++I G G +EA +F G+
Sbjct: 276 SALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGL----- 330
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
D TL+S + + ++S L + + +++ N +IT+YS+ G + ++
Sbjct: 331 --RDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLK-HLTSLNTMITVYSKNGELDEAVK 387
Query: 361 AFRQIHSP-NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + N V+WN++++ + +G + +AL + M + TF L AC +
Sbjct: 388 LFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLC 447
Query: 420 KVNESMDLFELMVKVYGIIPSSEHY---TCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
+ L + K P E+ T LVD S+ G L A Q + F + W
Sbjct: 448 SFQQGQLLHAHLAKT----PYQENVYVGTALVDFYSKCGHLADA-QRSFTSIFSPNVAAW 502
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQ----NSAVYVMLSNLYAAAGM 522
+L+ + G A + R + Q N+A +V + + + AG+
Sbjct: 503 TALINGYAYH---GCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGL 549
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 14/245 (5%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y +V I K G L AR +F+ + + S+N MI+GY+Q G EAL L S
Sbjct: 33 YPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVS 92
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M ++ ++ + + +AC+ L G+Q H L+ ++G++ V +A++ Y +C
Sbjct: 93 FMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCC 152
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
GI ++E+ F ++ N V W+ ++A + Q A+ F +M + D + + +L+S
Sbjct: 153 GIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVR----DVVAWTTLIS 208
Query: 414 ACGHAGK---VNESMDLFELMVKVYGIIPSSEHYTCLVDILSR-----AGQLEKAWQITQ 465
G+A + ++DLF M + ++P+ C++ + +R G++ I
Sbjct: 209 --GYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKD 266
Query: 466 GMPFE 470
G F+
Sbjct: 267 GFDFD 271
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 260/466 (55%), Gaps = 13/466 (2%)
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
C++ G + R+ F E T N +I+ ++K G L+EA LF++MP RNV+S
Sbjct: 26 CLVRGAVQQARLVHEH-VFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVS 84
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA----RELFYRMP 232
+T M+ + KA M + V + Y R C+ R+L +
Sbjct: 85 WTTMISAYSNSNLNHKALDFLILMLREGVRP---NMYTYSSVLRACDGLLNLRQLHGSIL 141
Query: 233 D--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+ +VFV +A+I + K+G +A +F + D V +N++I G+AQN +E L
Sbjct: 142 KVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLH 201
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
L+ M + D D +TL SV AC+ L LL GRQ HV V++ ++ ++ + NA++ MY
Sbjct: 202 LYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYC 259
Query: 351 RCGGILDSELAF-RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
+CG + D+ L F R + +++SW+T+IA AQ+G AL F M G P+ IT L
Sbjct: 260 KCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITIL 319
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
+L AC HAG VN+ F+ M + +GI P EHY C++D+L RAG+L++A ++ M
Sbjct: 320 GVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNH 379
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
E D W LL AC ++ NV+L AAK++ +LDP ++ Y++LSN+YA + W DV V
Sbjct: 380 EPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEV 439
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
R M+ +GV K SWIE+ +VH F+ GD SHP I++I EL +
Sbjct: 440 RRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQ 485
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 172/378 (45%), Gaps = 60/378 (15%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER--- 141
N +I Y + G L E++NLF MP +N+VSW MI+ +++ A D+ M
Sbjct: 55 NTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVR 114
Query: 142 -NTATYNAMI---SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
N TY++++ G L +L + + + +V +A++D + K GE A +
Sbjct: 115 PNMYTYSSVLRACDGLLNLRQLHGS--ILKVGLESDVFVRSALIDTYSKLGEQHDALNVF 172
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------------------------- 232
+ M ++V W +I G+ +N E L+ RM
Sbjct: 173 NEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLE 232
Query: 233 ----------DYDKNVFVVTAMITGFCKVGMLENARLLFER-IQPKDCVSFNAMIAGYAQ 281
YD+++ + A++ +CK G LE+A LLF R + KD +S++ MIAG AQ
Sbjct: 233 LGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQ 292
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG------RQSHVLVIRNGF 335
NG + +AL+LF M +P+ T++ V ACS L+N+G + H G
Sbjct: 293 NGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHF-----GI 347
Query: 336 EANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
+ +I + R G + ++ +L H P+ V+W ++ A H + + A+ ++
Sbjct: 348 DPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAI--YA 405
Query: 395 QMGLNGFDP-DGITFLSL 411
+ DP D T++ L
Sbjct: 406 AKEILKLDPADAGTYILL 423
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 40/275 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV +A I S+ G+ A +F++M T D++ WN+II G+ QN E+ +L++ M
Sbjct: 149 VFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKR 208
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ V+ + +T +++ LE ++ +
Sbjct: 209 ADFVA---------------------------DQSTLTSVLRACTGLALLELGRQVHVHV 241
Query: 170 PR--RNVISYTAMLDGFMKKGEVDKARAL-SDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ +++I A+LD + K G ++ A L + M+ K+V+SW+ MI G +N +A +
Sbjct: 242 LKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALK 301
Query: 227 LFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----FNAMIAGY 279
LF M N + ++ G++ + F+ ++ + + +I
Sbjct: 302 LFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLL 361
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ G +EA++L +M+ +PD T + AC
Sbjct: 362 GRAGKLDEAVKLIH---EMNHEPDAVTWRILLGAC 393
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQM-TTKDVITWNAIITGYWQNGFLQESKNLFQS 106
Q + +NNA + + G + A LF +M T KDVI+W+ +I G QNGF ++ LF++
Sbjct: 246 QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEA 305
Query: 107 M----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHG 157
M P N ++ ++ C ++D + YFQ+M E Y +I + G
Sbjct: 306 MKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAG 365
Query: 158 RLEEATRLFEQM 169
+L+EA +L +M
Sbjct: 366 KLDEAVKLIHEM 377
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 9/217 (4%)
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
++ M + + D T + C + + R H V NG+E + N +I M
Sbjct: 1 MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60
Query: 349 YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
Y + G + ++ F ++ N+VSW T+I+A++ KAL F M G P+ T+
Sbjct: 61 YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY--TCLVDILSRAGQLEKAWQITQG 466
S+L AC + ++L +L + + S+ + + L+D S+ G+ A +
Sbjct: 121 SSVLRAC------DGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNE 174
Query: 467 MPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
M D VW S++ N + + K+M+ D
Sbjct: 175 M-ITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRAD 210
>gi|356518597|ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Glycine max]
Length = 535
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 248/413 (60%), Gaps = 6/413 (1%)
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ DA + F MPERN T+NAMISG+L++G E A +FE+M + ++++ M+ GF +
Sbjct: 97 VRDARNLFDTMPERNVVTWNAMISGYLRNGDTESAYLVFEKMQGKTQVTWSQMIGGFARN 156
Query: 188 GEVDKARALSDYM--SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
G++ AR L D + KNVV+WTVM+ GY + ARE+F MP+ +N FV ++MI
Sbjct: 157 GDIATARRLFDEVPHELKNVVTWTVMVDGYARIGEMEAAREVFEMMPE--RNCFVWSSMI 214
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
G+ K G + A +F+ + ++ +N+MIAGY QNG E+AL F GM +PD+
Sbjct: 215 HGYFKKGNVTEAAAVFDWVPVRNLEIWNSMIAGYVQNGFGEKALLAFEGMGAEGFEPDEF 274
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T+VSV +AC+ L L+ G+Q H ++ G N V + ++ MY++CG ++++ L F
Sbjct: 275 TVVSVLSACAQLGHLDVGKQIHHMIEHKGIVVNPFVLSGLVDMYAKCGDLVNARLVFEGF 334
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
N+ WN +I+ FA +G + L FF +M + PDGITFL++LSAC H G V E++
Sbjct: 335 TEKNIFCWNAMISGFAINGKCSEVLEFFGRMEESNIRPDGITFLTVLSACAHRGLVTEAL 394
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
++ M + Y I +HY C+VD+L RAG+L+ A+ + MP + + V G++L AC I
Sbjct: 395 EVISKM-EGYRIEIGIKHYGCMVDLLGRAGRLKDAYDLIVRMPMKPNDTVLGAMLGACRI 453
Query: 486 NLNVELGELAAKKMRELDPQNSAVY-VMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+ ++ + E K + E ++ + V+LSN+YAA+ W R++ + + G
Sbjct: 454 HSDMNMAEQVMKLICEEPVTGASSHNVLLSNIYAASEKWEKAERMKRITVDGG 506
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 186/384 (48%), Gaps = 44/384 (11%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+ S V + A ++ S+ G + AR LFD M ++V+TWNA+I+GY +NG + +
Sbjct: 73 IKAGSESDVIIGTALLTTYSKCGVVRDARNLFDTMPERNVVTWNAMISGYLRNGDTESAY 132
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--RNTATYNAMISGFLKHGRL 159
+F+ M K V+W+ MI G N I A F +P +N T+ M+ G+ + G +
Sbjct: 133 LVFEKMQGKTQVTWSQMIGGFARNGDIATARRLFDEVPHELKNVVTWTVMVDGYARIGEM 192
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
E A +FE MP RN +++M+ G+ KKG V +A A+ D++ +N+ W MI GYV+N
Sbjct: 193 EAAREVFEMMPERNCFVWSSMIHGYFKKGNVTEAAAVFDWVPVRNLEIWNSMIAGYVQNG 252
Query: 220 RFCEARELFYRM------PDYDK-------------------------------NVFVVT 242
+A F M PD N FV++
Sbjct: 253 FGEKALLAFEGMGAEGFEPDEFTVVSVLSACAQLGHLDVGKQIHHMIEHKGIVVNPFVLS 312
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++ + K G L NARL+FE K+ +NAMI+G+A NG E L F M + +++P
Sbjct: 313 GLVDMYAKCGDLVNARLVFEGFTEKNIFCWNAMISGFAINGKCSEVLEFFGRMEESNIRP 372
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN--AVITMYSRCGGILDS-E 359
D T ++V +AC+ L+ E + V+ G+ + + + ++ + R G + D+ +
Sbjct: 373 DGITFLTVLSACAHRGLVTEALE--VISKMEGYRIEIGIKHYGCMVDLLGRAGRLKDAYD 430
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQH 383
L R PN ++ A H
Sbjct: 431 LIVRMPMKPNDTVLGAMLGACRIH 454
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
D + +F AC++L L+ + H I+ G E++V + A++T YS+CG + D+ F
Sbjct: 45 DSSVAPLLFKACASLPFLHYVKALHAESIKAGSESDVIIGTALLTTYSKCGVVRDARNLF 104
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+ N+V+WN +I+ + ++G E A + F +M +T+ ++ G +
Sbjct: 105 DTMPERNVVTWNAMISGYLRNGDTESAYLVFEKMQ----GKTQVTWSQMIGGFARNGDIA 160
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ LF+ +V + + +T +VD +R G++E A ++ + MP E + VW S++
Sbjct: 161 TARRLFD---EVPHELKNVVTWTVMVDGYARIGEMEAAREVFEMMP-ERNCFVWSSMI 214
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/570 (31%), Positives = 312/570 (54%), Gaps = 37/570 (6%)
Query: 41 LIRLFSTQYV---FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
L++L ++YV +V ++ I + G + A+++FD ++ WN +I+ + QN F
Sbjct: 212 LVKL-GSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFS 270
Query: 98 QESKNLF-QSMPVKNIVSWNCMIAGCIDNDRIDDAFDY---FQAMPERNTAT-----YNA 148
E LF Q++ ++ + I F+ A +N A NA
Sbjct: 271 LEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNA 330
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
+I+ + + ++ + ++F+ MP ++V+S+ M+ F++ G D+A L M ++++
Sbjct: 331 LIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVD 390
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVF------------VVTAMITGFCKVGMLEN 256
+V +T + A +L R PD K + + +I + K G++E
Sbjct: 391 SVTVTALLS-----AASDL--RNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEA 443
Query: 257 ARLLFERI--QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
A+ +FE+ +D ++N+M++GY QNG+ ++A + M+ + P+ TL S+ AC
Sbjct: 444 AQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPAC 503
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ ++ G+Q H IRN + NV V A+I MYS+ G I +E F + + ++V+++
Sbjct: 504 NPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYS 563
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+I + QHG E AL F +M +G PD +T +++LSAC +AG V+E + +FE M V
Sbjct: 564 TMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTV 623
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT-GVWGSLLAACVINLNVELGE 493
Y I PS+EH+ C+ D+L RAG+++KA++ G+ + + +WGSLLAAC I+ ELG+
Sbjct: 624 YNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGK 683
Query: 494 LAAKKMRELDPQN--SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
L AKK+ E++ N + +V+LSN+YA W +V VR M+E+G+ K+ SWIEI
Sbjct: 684 LVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAG 743
Query: 552 KVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+++F D HP D+I+ L+ ++MK
Sbjct: 744 YMNHFASKDRKHPQSDQIYSMLEELLMEMK 773
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 210/473 (44%), Gaps = 70/473 (14%)
Query: 93 QNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER------NTATY 146
Q G L ++ LF ++P + V WN +I G + N+ D+A ++ M ++ TY
Sbjct: 16 QEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTY 75
Query: 147 NAMISGF-----LKHGRLEEATRLFEQM-PRRNVISYTAML-----------DGFMKKG- 188
++++ L G+ A L M P R I Y ++L DG M G
Sbjct: 76 SSVLKACADTRNLVVGKAVHAHFLRCLMNPSR--IVYNSLLNMYSMCSSTTPDGKMVSGY 133
Query: 189 -EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM---------------- 231
D R + D M + VV+W +I YV+ ER+ EA + F M
Sbjct: 134 SRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVF 193
Query: 232 -----------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+Y +++VV++ I + ++G LE A+ +F+ ++
Sbjct: 194 PAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERN 253
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQSH 327
+N MI+ + QN + E ++LF ++ D D+ TL+S +A S LQ Q H
Sbjct: 254 TEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLH 313
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
VI+N V V NA+I MYSRC I S F + ++VSWNT+I+AF Q+G +
Sbjct: 314 AFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLND 373
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+AL+ F +M D +T +LLSA + +++ + Y L
Sbjct: 374 EALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSY--L 431
Query: 448 VDILSRAGQLEKAWQI-TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+D+ +++G +E A + + E D W S+++ N V+ L ++M
Sbjct: 432 IDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQM 484
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 254/455 (55%), Gaps = 49/455 (10%)
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-----P 232
+A++D + K G ++ AR L D + +NVVSWT MI+GYV+NER EA LF
Sbjct: 125 SALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDET 184
Query: 233 DYDK-----------------------NVFVVTAMITG--------------------FC 249
DYD+ V VT + G +
Sbjct: 185 DYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYA 244
Query: 250 KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLV 308
K G + +R +F+ ++ D S+N++IA YAQNG++ EA LFS M+K +++ + TL
Sbjct: 245 KCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLS 304
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
+V AC+ L G+ H V++ E N+ V +++ MY +CG + + AF ++
Sbjct: 305 AVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRK 364
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
N+ SW ++A + HGH ++A+ F +M G P+ ITF+S+L+AC HAG + E F
Sbjct: 365 NVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWF 424
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
M + + P EHY+C+VD+L RAG L++A+ + Q M + D VWGSLL AC I+ N
Sbjct: 425 NKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKN 484
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
VELGE++A+K+ +LDP N YV+LSN+YA AG W DV R+R+LMK G+ K YS +E
Sbjct: 485 VELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVE 544
Query: 549 IGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+VH FL GD HP +KI+ L +V+++ V
Sbjct: 545 HKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEV 579
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 194/449 (43%), Gaps = 69/449 (15%)
Query: 57 ISALSRAGKISAARQLFDQMTT----KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
I + S + A +Q+ Q D+ +A+I Y + G+L +++ LF +P +N+
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
VSW MI+G + N+R +A F+ + Y+ ++ + + + R
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGC-VISACARV 211
Query: 173 NVISYT--------------------AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
V S T ++D + K GE+ +R + D M +V SW +I
Sbjct: 212 CVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLI 271
Query: 213 TGYVKNERFCEARELFYRMP--------------------------------------DY 234
Y +N EA LF M +
Sbjct: 272 AVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMEL 331
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
+ N+ V T+++ +CK G +E AR F+R++ K+ S+ M+AGY +G +EA+++F
Sbjct: 332 EDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYE 391
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
MI+ ++P+ T VSV ACS LL EG + + E + + ++ + R G
Sbjct: 392 MIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAG 451
Query: 354 GILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
+ ++ +++ P+ + W +++ A H + E I S L DP + LL
Sbjct: 452 YLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEI--SARKLFKLDPSNCGYYVLL 509
Query: 413 SAC-GHAGKVNESMDLFELMVKVYGIIPS 440
S AG+ ++ ++ +++K +G++ +
Sbjct: 510 SNIYADAGRWDD-VERMRILMKNHGLLKT 537
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 126/239 (52%), Gaps = 13/239 (5%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y ++FV +A+I + K G L +AR LF+ I ++ VS+ +MI+GY QN A EA+ LF
Sbjct: 117 YGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFK 176
Query: 294 GMIKMD-----------MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
+ +D + D L V +AC+ + + + H L ++ GFE ++V
Sbjct: 177 EFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVG 236
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG-F 401
N ++ Y++CG I S F + ++ SWN++IA +AQ+G +A FS M G
Sbjct: 237 NTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEV 296
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+ +T ++L AC H+G + + + +VK+ + + T +VD+ + G++E A
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM-ELEDNLVVGTSIVDMYCKCGRVEMA 354
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 133/267 (49%), Gaps = 15/267 (5%)
Query: 256 NARLLFERIQPKDCV-SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
N R +F + K V S+N++IA +A++G + +AL FS M K+ + P+ +T +C
Sbjct: 37 NLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSC 96
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
S+L L G+Q H G+ +++ V +A+I MYS+CG + D+ F +I N+VSW
Sbjct: 97 SSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWT 156
Query: 375 TIIAAFAQHGHYEKALIFFSQMGL---NGFDP--------DGITFLSLLSACGHAGKVNE 423
++I+ + Q+ +A+ F + L +D D + ++SAC +
Sbjct: 157 SMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSV 216
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ + L VK G L+D ++ G++ + ++ GM E D W SL+A
Sbjct: 217 TECVHGLAVK-KGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME-ETDVCSWNSLIAVY 274
Query: 484 VIN-LNVELGELAAKKMRELDPQNSAV 509
N L+VE L + ++ + + +AV
Sbjct: 275 AQNGLSVEAFSLFSDMVKRGEVRYNAV 301
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 159/403 (39%), Gaps = 111/403 (27%)
Query: 14 RILFPPILRILSTP-DSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQL 72
R FP ++ S+ D C H + S +FV +A I S+ G ++ AR+L
Sbjct: 86 RSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSD--IFVASALIDMYSKCGYLNDARKL 143
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN---------------C 117
FD++ ++V++W ++I+GY QN +E+ LF+ + + ++ C
Sbjct: 144 FDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGC 203
Query: 118 MIAGCID-------------------------NDRIDDAF----------DYFQAMPERN 142
+I+ C + + DA+ F M E +
Sbjct: 204 VISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETD 263
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY------------------------- 177
++N++I+ + ++G EA LF M +R + Y
Sbjct: 264 VCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIH 323
Query: 178 ---------------TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
T+++D + K G V+ AR D + KNV SWTVM+ GY +
Sbjct: 324 DQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGK 383
Query: 223 EARELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS----- 271
EA ++FY M P+Y V V+ A G+L+ F +++ + V
Sbjct: 384 EAMKVFYEMIRCGIKPNYITFVSVLAAC----SHAGLLKEGWHWFNKMKCEFDVEPGIEH 439
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
++ M+ + G +EA L +M ++PD S+ AC
Sbjct: 440 YSCMVDLLGRAGYLKEAYGLIQ---EMKVKPDFIVWGSLLGAC 479
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 258/443 (58%), Gaps = 11/443 (2%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
N +I+ ++K G L +A +F++MP RNV+S+T M+ + DKA M + V
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 207 SWTVMITGYVKNERFCEA----RELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLL 260
M T Y R C+ R+L + D +VFV +A+I + + G LENA +
Sbjct: 64 P--NMFT-YSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ + D V ++++IAG+AQN +EALRLF M + TL SV AC+ L LL
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
GRQ HV V++ ++ ++ + NA++ MY +CG + D+ F ++ +++SW+T+IA
Sbjct: 181 ELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGL 238
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
AQ+G+ ++AL F M + G P+ +T + +L AC HAG V E + F M +++GI P
Sbjct: 239 AQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPG 298
Query: 441 SEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMR 500
EHY C++D+L RAG+L +A + M E D W +LL AC ++ NV++ AAK++
Sbjct: 299 REHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQIL 358
Query: 501 ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGD 560
LDPQ++ YV+LSN+YA W DV VR M +G+ K+ SWIE+ ++H F+ GD
Sbjct: 359 RLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGD 418
Query: 561 MSHPCIDKIHLELKRASVQMKSV 583
SHP I +I+++L + ++ V
Sbjct: 419 RSHPQIREINIQLNQLIYKLMGV 441
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 163/351 (46%), Gaps = 48/351 (13%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER--- 141
N +I Y + G L +++++F MP +N+VSW MI+ D A ++ M
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 142 -NTATYN--------------------------------AMISGFLKHGRLEEATRLFEQ 168
N TY+ A+I + + G LE A R+F++
Sbjct: 64 PNMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDE 123
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA---- 224
M +++ +++++ GF + + D+A L M ++ +T + R C
Sbjct: 124 MVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVL---RACTGLALL 180
Query: 225 ---RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
R++ + YD+++ + A++ +CK G LE+A +F R+ KD +S++ MIAG AQ
Sbjct: 181 ELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQ 240
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVS 340
NG ++EAL+LF M + ++P+ T+V V ACS L+ EG H + G +
Sbjct: 241 NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGRE 300
Query: 341 VCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKAL 390
+I + R G + ++ ++ P+ V+W ++ A H + + A+
Sbjct: 301 HYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAI 351
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 131/252 (51%), Gaps = 15/252 (5%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
F++ +I + K G+L +A+ +F+++ ++ VS+ MI+ Y+ + ++AL M++
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++P+ T SV AC L L RQ H +I+ G +++V V +A+I +YSR G + ++
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F ++ + +LV W++IIA FAQ+ ++AL F +M GF T S+L AC
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRAC--- 174
Query: 419 GKVNESMDLFELMVKVYGIIPSSEH----YTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
+ L EL +V+ + + L+D+ + G LE A + M E D
Sbjct: 175 ----TGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRM-VEKDVI 229
Query: 475 VWGSLLAACVIN 486
W +++A N
Sbjct: 230 SWSTMIAGLAQN 241
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C+I++ VFV +A I SR G++ A ++FD+M T D++ W++II G+ QN E
Sbjct: 88 CIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDE 147
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDN------DRIDDAFDYFQAMPERNTATYNAMISGF 153
+ LF+ M ++ + + + +++ NA++ +
Sbjct: 148 ALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMY 207
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
K G LE+A +F +M ++VIS++ M+ G + G +A L + M + V I
Sbjct: 208 CKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIV 267
Query: 214 G 214
G
Sbjct: 268 G 268
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q + +NNA + + G + A +F +M KDVI+W+ +I G QNG+ +E+ LF+SM
Sbjct: 195 QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESM 254
Query: 108 PVKNIVSWNCMIAG----CIDNDRIDDAFDYFQAMPE-----RNTATYNAMISGFLKHGR 158
V I I G C +++ YF +M E Y MI + GR
Sbjct: 255 KVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGR 314
Query: 159 LEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKA 193
L EA L +M + +++ A+L+ VD A
Sbjct: 315 LSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVA 350
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 271/520 (52%), Gaps = 46/520 (8%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
+DV NA++ Y + ++ ++ +F M +++VSW+ MI N D A + + M
Sbjct: 157 RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM 216
Query: 139 P----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN------VISYTAMLDGFMKKG 188
+ +M++ F + + + R + V + TA+LD + K G
Sbjct: 217 NFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCG 276
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGF 248
+ AR L + ++ K VVSWT AMI G
Sbjct: 277 HLGLARQLFNGLTQKTVVSWT---------------------------------AMIAGC 303
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
+ LE AR LF+ Q +D + + AM++ YAQ ++A LF M ++P T+V
Sbjct: 304 IRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIV 363
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
S+ + C+ L+ G+ H + + E + + A++ MY++CG I + F + S
Sbjct: 364 SLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR 423
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
++ WN II FA HG+ E+AL F++M G P+ ITF+ LL AC HAG V E LF
Sbjct: 424 DICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLF 483
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
E MV +G++P EHY C+VD+L RAG L++A ++ + MP + +T VWG+L+AAC ++ N
Sbjct: 484 EKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKN 543
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
+LGELAA ++ E++P+N V++SN+YAAA W D VR MK G+ K+ +S IE
Sbjct: 544 PQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIE 603
Query: 549 IGNKVHYFLGGDMSHPCIDKIH---LELKRASVQMKSVDD 585
+ VH FL GD SHP I +I+ E++R + V D
Sbjct: 604 VNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPD 643
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 180/416 (43%), Gaps = 57/416 (13%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV NA + + AR +FD+M +DV++W+ +I +N + L + M
Sbjct: 159 VFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNF 218
Query: 110 KNIVSWNCMIAGCID------NDRIDDAFDYFQAMPERN----TATYNAMISGFLKHGRL 159
+ + ++ N R+ A + N T A++ + K G L
Sbjct: 219 MQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHL 278
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
A +LF + ++ V+S+TAM+ G ++ +++ARAL D ++V+ WT M++ Y +
Sbjct: 279 GLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQAN 338
Query: 220 RFCEARELFYRMP------------------------DYDK-------------NVFVVT 242
+A LF +M D K + + T
Sbjct: 339 CIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNT 398
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
A++ + K G + A LF +D +NA+I G+A +G EEAL +F+ M + ++P
Sbjct: 399 ALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKP 458
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELA 361
+D T + + ACS L+ EG++ ++ G + ++ + R G+LD A
Sbjct: 459 NDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGR-AGLLDE--A 515
Query: 362 FRQIHS----PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I S PN + W ++AA H + + + +Q L +P+ + L+S
Sbjct: 516 HEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQ--LLEIEPENCGYNVLMS 569
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N +I Y + AL +++ + KMD + D+ SV AC + G++ H V+
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ G + +V V NA++ MY C + + L F ++ ++VSW+T+I + +++ ++ AL
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK----VYGIIPSSEHYTCL 447
+M P + +S+++ + + +++ + +P++ T L
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTT---TAL 268
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+D+ ++ G L A Q+ G+ + W +++A C+
Sbjct: 269 LDMYAKCGHLGLARQLFNGLT-QKTVVSWTAMIAGCI 304
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/570 (31%), Positives = 312/570 (54%), Gaps = 37/570 (6%)
Query: 41 LIRLFSTQYV---FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
L++L ++YV +V ++ I + G + A+++FD ++ WN +I+ + QN F
Sbjct: 236 LVKL-GSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFS 294
Query: 98 QESKNLF-QSMPVKNIVSWNCMIAGCIDNDRIDDAFDY---FQAMPERNTAT-----YNA 148
E LF Q++ ++ + I F+ A +N A NA
Sbjct: 295 LEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNA 354
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
+I+ + + ++ + ++F+ MP ++V+S+ M+ F++ G D+A L M ++++
Sbjct: 355 LIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVD 414
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVF------------VVTAMITGFCKVGMLEN 256
+V +T + A +L R PD K + + +I + K G++E
Sbjct: 415 SVTVTALLS-----AASDL--RNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEA 467
Query: 257 ARLLFERI--QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
A+ +FE+ +D ++N+M++GY QNG+ ++A + M+ + P+ TL S+ AC
Sbjct: 468 AQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPAC 527
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ ++ G+Q H IRN + NV V A+I MYS+ G I +E F + + ++V+++
Sbjct: 528 NPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYS 587
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+I + QHG E AL F +M +G PD +T +++LSAC +AG V+E + +FE M V
Sbjct: 588 TMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTV 647
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT-GVWGSLLAACVINLNVELGE 493
Y I PS+EH+ C+ D+L RAG+++KA++ G+ + + +WGSLLAAC I+ ELG+
Sbjct: 648 YNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGK 707
Query: 494 LAAKKMRELDPQN--SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
L AKK+ E++ N + +V+LSN+YA W +V VR M+E+G+ K+ SWIEI
Sbjct: 708 LVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAG 767
Query: 552 KVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+++F D HP D+I+ L+ ++MK
Sbjct: 768 YMNHFASKDRKHPQSDQIYSMLEELLMEMK 797
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 217/493 (44%), Gaps = 67/493 (13%)
Query: 56 KISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES----KNLFQSMP-VK 110
++S L + G++ ARQLFD + + WN II G N F E+ N+ S P VK
Sbjct: 34 RLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVK 93
Query: 111 -NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ +++ ++ C D RN A+ + FL+ + + ++ +
Sbjct: 94 CDSYTYSSVLKACADT---------------RNLVVGKAVHAHFLR-CLMNPSRIVYNSL 137
Query: 170 PRRNVISYTAMLDGFMKKG--EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
+ + DG M G D R + D M + VV+W +I YV+ ER+ EA +
Sbjct: 138 LNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQ 197
Query: 228 FYRM---------------------------------------PDYDKNVFVVTAMITGF 248
F M +Y +++VV++ I +
Sbjct: 198 FSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMY 257
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATL 307
++G LE A+ +F+ ++ +N MI+ + QN + E ++LF ++ D D+ TL
Sbjct: 258 AELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTL 317
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
+S +A S LQ Q H VI+N V V NA+I MYSRC I S F +
Sbjct: 318 LSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPE 377
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
++VSWNT+I+AF Q+G ++AL+ F +M D +T +LLSA +
Sbjct: 378 KDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQT 437
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI-TQGMPFEADTGVWGSLLAACVIN 486
+++ + Y L+D+ +++G +E A + + E D W S+++ N
Sbjct: 438 HGYLLRNGIQFEGMDSY--LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQN 495
Query: 487 LNVELGELAAKKM 499
V+ L ++M
Sbjct: 496 GLVDQAFLILRQM 508
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 290/552 (52%), Gaps = 32/552 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV+N+ +S S+ G++ AR++FD +D ++WN++++GY + G +E +F M
Sbjct: 144 VFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRR 203
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHG 157
N + +I C + R D D +A+ + + +AMI + K G
Sbjct: 204 GGMGLNSFALGSVIKCC--SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKG 261
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM------ 211
L EA LF + NV+ + M+ GF + V S+ ++ + V M
Sbjct: 262 ALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFT 321
Query: 212 ---------ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
+ GY++ + + + Y + D F+ +A+I + G +E+ F
Sbjct: 322 FSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDD---FIGSALIDLYFNSGCMEDGFRCFR 378
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
D V++ AM++G QN + E+AL LF + ++PD T+ SV AC++L +
Sbjct: 379 SSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARA 438
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G Q ++GF+ + N+ + MY+R G + + F+++ S ++VSW+ +I+ AQ
Sbjct: 439 GEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQ 498
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG AL FF +M P+ ITFL +L+AC H G V+E + +E M K YG+ P+ +
Sbjct: 499 HGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIK 558
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
H TC+VD+L RAG+L A F AD +W SLLA+C I+ ++E G+L A ++ EL
Sbjct: 559 HCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMEL 618
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P +SA YV+L N+Y AG ++ R LMK++GV K+ SWIE+ VH F+ GD S
Sbjct: 619 EPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKS 678
Query: 563 HPCIDKIHLELK 574
HP I+ +L+
Sbjct: 679 HPESSAIYTKLE 690
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 180/367 (49%), Gaps = 27/367 (7%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG----------EVDKARAL 196
N +++ + + G A RL ++MPRRN +S+ ++D + ++G +A
Sbjct: 47 NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
D S+ ++ G+++ R A + + VFV ++++ + K G +
Sbjct: 107 VDRFSYAAALAACSR-AGHLRAGRAVHALAI---LDGLSSGVFVSNSLVSMYSKCGEMGE 162
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR +F+ + +D VS+N++++GY + G EE +R+F+ M + M + L SV CS
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222
Query: 317 L--QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
++ H VI+ G +++V + +A+I MY++ G ++++ FR + PN+V +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282
Query: 375 TIIAAFAQHGHY------EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
T+IA F + +AL +S++ G P TF S+L AC AG + +
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
++K Y + L+D+ +G +E ++ + P + D W ++++ CV N
Sbjct: 343 GQVIK-YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGCVQN-- 398
Query: 489 VELGELA 495
EL E A
Sbjct: 399 -ELHEKA 404
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 168/398 (42%), Gaps = 79/398 (19%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI---------------------AGCI 123
N ++ Y + G ++ L MP +N VS+N +I AG +
Sbjct: 47 NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG-V 105
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
D DR F Y A+ + A G L+ GR A + + + V +++
Sbjct: 106 DVDR----FSYAAALAACSRA-------GHLRAGRAVHALAILDGLS-SGVFVSNSLVSM 153
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------ 231
+ K GE+ +AR + D ++ VSW +++GYV+ E +F M
Sbjct: 154 YSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFAL 213
Query: 232 ---------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
D +VF+V+AMI + K G L A LF +
Sbjct: 214 GSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSV 273
Query: 265 QPKDCVSFNAMIAGYAQ------NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
Q + V FN MIAG+ + VA EAL L+S + MQP + T SV AC+
Sbjct: 274 QEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAG 333
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L G+Q H VI+ F+ + + +A+I +Y G + D FR ++V+W +++
Sbjct: 334 YLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVS 393
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
Q+ +EKAL F + G PD T S+++AC
Sbjct: 394 GCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACA 431
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 172/379 (45%), Gaps = 34/379 (8%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL- 97
C+I+ VF+ +A I ++ G + A LF + +V+ +N +I G+ + +
Sbjct: 236 GCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVI 295
Query: 98 -----QESKNLFQSMPVKNI---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNT 143
E+ L+ + + + V C +AG ++ + + + +
Sbjct: 296 GKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG-QVIKYTFQEDD 354
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL------- 196
+A+I + G +E+ R F P+ +++++TAM+ G ++ +KA +L
Sbjct: 355 FIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGA 414
Query: 197 ---SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
D + +V++ + E+ + F +D+ + + + + + G
Sbjct: 415 GLKPDLFTISSVMNACASLAVARAGEQI----QCFATKSGFDRFTVMGNSCVHMYARSGD 470
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
++ A F+ ++ D VS++A+I+ +AQ+G A +AL F M+ + P++ T + V TA
Sbjct: 471 VDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTA 530
Query: 314 CSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAF--RQIHSPNL 370
CS L++EG + + + ++ G + C V+ + R G + D+E AF I +
Sbjct: 531 CSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAE-AFISNSIFHADP 589
Query: 371 VSWNTIIAAFAQHGHYEKA 389
V W +++A+ H E+
Sbjct: 590 VIWRSLLASCRIHRDLERG 608
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 115/227 (50%), Gaps = 5/227 (2%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
++F+ ++ +C++G AR L + + ++ VSFN +I Y++ G+A +L +
Sbjct: 42 SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARAR 101
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ + D + + ACS L GR H L I +G + V V N++++MYS+CG +
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMG 161
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
++ F + VSWN++++ + + G E+ + F+ M G + S++ C
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC- 220
Query: 417 HAGKVNESMDLFELM---VKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+G+ + +MD+ E + V G+ + ++D+ ++ G L +A
Sbjct: 221 -SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEA 266
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 5 SYFHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQ-----YVFVNNAKISA 59
S FH++ L L P + I S ++C + + I+ F+T+ + + N+ +
Sbjct: 406 SLFHES-LGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHM 464
Query: 60 LSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----PVKNIVSW 115
+R+G + AA + F +M + DV++W+A+I+ + Q+G +++ + F M V N +++
Sbjct: 465 YARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITF 524
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPE 140
++ C +D+ Y++ M +
Sbjct: 525 LGVLTACSHGGLVDEGLRYYETMTK 549
>gi|22293716|dbj|BAC10060.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 631
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 247/434 (56%), Gaps = 3/434 (0%)
Query: 131 AFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
A F M +R+ ++N+++ ++ G A FE MP RNV+S+ ++ GF + G++
Sbjct: 170 ARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFARMGDM 229
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCK 250
ARA+ D M +N VSW +MI+GY + AR +F RM K+V TAM++ + K
Sbjct: 230 VTARAVFDRMPSRNAVSWNLMISGYAMSGDVEAARSVFDRMDQ--KDVVSWTAMVSAYAK 287
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS-GMIKMDMQPDDATLVS 309
+G L+ LF+ + K+ VS+NAMI GY N +EALR F M++ +PD+ATLVS
Sbjct: 288 IGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVS 347
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
V +AC+ L + + ++ V++ NA+I M+++CG + +E F ++ +
Sbjct: 348 VVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETRC 407
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+++W T+I+ FA +G AL+ ++ M G D F++ L+AC H G + E +F
Sbjct: 408 IITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIFN 467
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
MV+ Y I P EHY C+VD+L RAG L++A + MP E +W +LL +CV + N
Sbjct: 468 EMVERYNIQPRMEHYGCMVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLCSCVAHGNA 527
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
EL E +KK+ EL+P NS+ V++SN A G W V R M+ G+ K S I++
Sbjct: 528 ELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQV 587
Query: 550 GNKVHYFLGGDMSH 563
G++VH FL D H
Sbjct: 588 GSEVHEFLAKDTRH 601
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 212/438 (48%), Gaps = 51/438 (11%)
Query: 23 ILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKIS-----AARQLFDQMT 77
+L P CG ++R VFV NA + R G AARQ+FD+M
Sbjct: 123 LLGLPRPCGCVHGQ----IVRCGFGSDVFVQNALMDVYHRCGGGGGGGVGAARQVFDEMV 178
Query: 78 TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQA 137
+DV++WN+I+ Y +G + F++MP +N+VSWN ++AG + A F
Sbjct: 179 DRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFARMGDMVTARAVFDR 238
Query: 138 MPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALS 197
MP RN ++N MISG+ G +E A +F++M +++V+S+TAM+ + K G++D L
Sbjct: 239 MPSRNAVSWNLMISGYAMSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKIGDLDTVNELF 298
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------PDYDKNVFVVT-------- 242
D+M KN+VSW MITGY N R+ EA F M PD V VV+
Sbjct: 299 DHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSV 358
Query: 243 -----------------------AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
A+I F K G + A +F +++ + +++ MI+G+
Sbjct: 359 EYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETRCIITWTTMISGF 418
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS-HVLVIRNGFEAN 338
A NG+ +AL +++ M + +Q DD ++ AC+ LL EG + +V R +
Sbjct: 419 AFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIFNEMVERYNIQPR 478
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
+ ++ + R G + ++ L + P++V W T++ + HG+ E LI +
Sbjct: 479 MEHYGCMVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLCSCVAHGNAE--LIEYVSKK 536
Query: 398 LNGFDPDGITFLSLLSAC 415
+ +P ++ L+S C
Sbjct: 537 ITELEPFNSSYQVLVSNC 554
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD---- 357
P+ T + AC+ L L H ++R GF ++V V NA++ +Y RCGG
Sbjct: 109 PNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGGVG 168
Query: 358 -SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
+ F ++ ++VSWN+I+ + G A+ FF M
Sbjct: 169 AARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAM 208
>gi|357463685|ref|XP_003602124.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491172|gb|AES72375.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 253/428 (59%), Gaps = 12/428 (2%)
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
DA F MPERN T+NAMI G+L++G + A FE+MP + +S++ M+ GF + G+
Sbjct: 104 DARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGD 163
Query: 190 VDKARALSDYMSF--KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITG 247
AR D + + K+VV WTVM+ GY K +ARE+F MP+ +N FV ++M+ G
Sbjct: 164 TLTARKFFDKVPYELKDVVIWTVMVDGYAKKGEMEDAREVFELMPE--RNYFVWSSMVCG 221
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+CK G + A +F RI ++ +N+MIAGY QNG E+AL F M +PD+ T+
Sbjct: 222 YCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTV 281
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
VSV +AC+ L L+ G+Q H ++ G N V + +I MY++CG ++++ L F +
Sbjct: 282 VSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNE 341
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
N+ WN +IA FA +G + L + +M + D +TF+++LSAC H G ++E++++
Sbjct: 342 RNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLDAVTFITVLSACAHGGLMSEALEV 401
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
M + YGI HY C+VD+L RAG+L++A+++ + MP + + V G+++ AC I+
Sbjct: 402 ISKM-EEYGIEMGIRHYGCMVDLLGRAGKLKEAYELIKRMPMKPNETVLGAMIGACWIHS 460
Query: 488 NVELGELAAKKMRELDPQNSAVY----VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
++++ E + M+ + ++A V+LSN+YAA+ W +R M + G K
Sbjct: 461 DMKMAE---QVMKMIGADSAACVNSHNVLLSNIYAASEKWEKAEMIRSSMVDGGSEKIPG 517
Query: 544 YSWIEIGN 551
YS I + N
Sbjct: 518 YSSIILSN 525
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 162/334 (48%), Gaps = 36/334 (10%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D +VF+ TA++ + K G++ +AR +F+ + ++ V++NAMI GY +NG A+ AL F
Sbjct: 83 DVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEE 142
Query: 295 MIK-------------------------MDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
M D P + V ++T + + ++ +
Sbjct: 143 MPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWT----VMVDGYAKKGEME 198
Query: 330 VIRNGF----EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
R F E N V ++++ Y + G ++++E FR+I NL WN++IA + Q+G
Sbjct: 199 DAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGC 258
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
EKAL F +MG++GF+PD T +S+LSAC G ++ + M++ GI + +
Sbjct: 259 GEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHH-MIECKGIAVNQFVLS 317
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
L+D+ ++ G L A + + E + W +++A +N +M+E + +
Sbjct: 318 GLIDMYAKCGDLVNARLVFESCN-ERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIR 376
Query: 506 NSAV-YVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
AV ++ + + A G+ + V M+E G+
Sbjct: 377 LDAVTFITVLSACAHGGLMSEALEVISKMEEYGI 410
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
+ AL L+ + D D + + AC + L + H I+ G + +V + A+
Sbjct: 34 KRALVLYK-QTRHDTTHDPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAI 92
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ Y++CG + D+ F + N+V+WN +I + ++G + AL+ F +M G
Sbjct: 93 VAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEM-------PG 145
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
T +S G + +++ + KV + +T +VD ++ G++E A ++ +
Sbjct: 146 KTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTVMVDGYAKKGEMEDAREVFE 205
Query: 466 GMPFEADTGVWGSLL 480
MP E + VW S++
Sbjct: 206 LMP-ERNYFVWSSMV 219
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 119/274 (43%), Gaps = 26/274 (9%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+ L + FV ++ + + G + A +F ++ +++ WN++I GY QNG +++
Sbjct: 203 VFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKA 262
Query: 101 KNLFQSMPVKN-------IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGF 153
F M V +VS +++ C +D + + A ++SG
Sbjct: 263 LEAFGEMGVDGFEPDEFTVVS---VLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGL 319
Query: 154 L----KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV---- 205
+ K G L A +FE RNV + AM+ GF G+ ++ D M N+
Sbjct: 320 IDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLDA 379
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFER 263
V++ +++ EA E+ +M +Y + + M+ + G L+ A L +R
Sbjct: 380 VTFITVLSACAHGGLMSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGKLKEAYELIKR 439
Query: 264 --IQPKDCVSFNAMIAG---YAQNGVAEEALRLF 292
++P + V AMI ++ +AE+ +++
Sbjct: 440 MPMKPNETV-LGAMIGACWIHSDMKMAEQVMKMI 472
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 252/437 (57%), Gaps = 4/437 (0%)
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
A++ + K G+++ A +LF++M R+ +S+TA++ G+++ G++D A L D M K+ +
Sbjct: 302 ALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAA 361
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ MI YVK C AR+LF MP+ ++V T MI G+ G L++AR LF+ + K
Sbjct: 362 FNTMIDAYVKLGDMCSARKLFDEMPE--RSVVSWTIMIYGYSSNGNLDSARSLFDAMPEK 419
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQS 326
+ S+NAMI+GY QN EAL+LF M ++PD+ T+VSV A + L L+ G
Sbjct: 420 NLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWV 479
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H V R + +V A+I MY++CG I+ S F + SWN +I AFA +G
Sbjct: 480 HRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRA 539
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++AL F +M GF P+ IT + +LSAC H+G V E F+ M + +G+ P EHY C
Sbjct: 540 KEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGC 598
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VD+L RAG L++A ++ + MP+EA+ + S L AC + +V E K+ +++ N
Sbjct: 599 MVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWN 658
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
Y+ML NLYA W++ V+ LM+ GV K+ S IE+ ++V F+ GD HP
Sbjct: 659 DGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKW 718
Query: 567 DKIHLELKRASVQMKSV 583
+ IH L + V MK
Sbjct: 719 EAIHSVLGQLWVHMKGT 735
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 38/318 (11%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ A++ Y + G + ++ LF M ++ VSW +I G + + +D+A F M
Sbjct: 296 DLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMI 355
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E+++A +N MI ++K G + A +LF++MP R+V+S+T M+ G+ G +D AR+L D
Sbjct: 356 EKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDA 415
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRM-------PD------------------- 233
M KN+ SW MI+GY +N++ EA +LF+ M PD
Sbjct: 416 MPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDL 475
Query: 234 ------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
D+ V TA+I + K G + +R +F+ + K+ S+NA+I +A
Sbjct: 476 GGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAI 535
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG A+EAL LF M P++ T++ V +AC+ L+ EG++ + G +
Sbjct: 536 NGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTPKIEH 595
Query: 342 CNAVITMYSRCGGILDSE 359
++ + R G + ++E
Sbjct: 596 YGCMVDLLGRAGCLQEAE 613
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 11/237 (4%)
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVS 309
G++ R+ R D N+MI Y E+ L+ + + PD T
Sbjct: 208 AGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSV 267
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ +C+ + EG++ H V+ GF ++ A++ MY++ G + + F ++ +
Sbjct: 268 LAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRS 327
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
VSW +I + + G + A F QM + D F +++ A G + + LF+
Sbjct: 328 QVSWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAFNTMIDAYVKLGDMCSARKLFD 383
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
M + S +T ++ S G L+ A + MP E + W ++++ N
Sbjct: 384 EMPE-----RSVVSWTIMIYGYSSNGNLDSARSLFDAMP-EKNLFSWNAMISGYXQN 434
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 181/567 (31%), Positives = 300/567 (52%), Gaps = 45/567 (7%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
LI++ + F+ N + S+ G + + ++F+ + K++I+WN + + + G L+ +
Sbjct: 736 LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLK- 155
+++F MP +++VSWN MI+G + DDAF +F M + TY+ ++S F+
Sbjct: 796 RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLS-FVSS 854
Query: 156 --HGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI- 212
G+ A+ + + NV+ +++ + K G VD A + M +++SW +I
Sbjct: 855 ACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIW 914
Query: 213 ----TGY--VKNERFCEARELFY---------------RMPDYDK--------------- 236
+GY + +F R + Y + D +K
Sbjct: 915 SCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLS 974
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N V +A I F K LE++ +FE I D V NAMI+ YA +G E AL+LF +
Sbjct: 975 NSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTL 1034
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ +++P + TL V +A S L +++G Q H LV+++G E++V V ++++ MY++ G I
Sbjct: 1035 RENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLID 1094
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F +I + +L+SWNT+I A +G KAL F ++ + G PD IT +L AC
Sbjct: 1095 SAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACN 1154
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
G V+E + +F M K YG+IP+ EHY C+VD++SR G+L++A I + MP E +W
Sbjct: 1155 VGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIW 1214
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
GSLL AC I ++ E A+++ EL+PQ+S Y++L+ Y G W + RV MKE+
Sbjct: 1215 GSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEK 1274
Query: 537 GVTKQCAYSWIEIGNKVHYFLGGDMSH 563
GV K SWI I N V F + H
Sbjct: 1275 GVRKVIGCSWIGIKNHVFVFKENQLLH 1301
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 168/575 (29%), Positives = 272/575 (47%), Gaps = 83/575 (14%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F N IS ++ G + AR+LF++M K+ I WN++I GY NG +E+ LF+ + +
Sbjct: 105 FSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLN 164
Query: 111 NI------------VSWNCMIAGCIDNDR------------------------------I 128
+ V C G +D + I
Sbjct: 165 PLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDI 224
Query: 129 DDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
D A M E + + +A+ISG+ GR+ +A R+F V+ + +M+ G++
Sbjct: 225 DSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANN 284
Query: 189 EVDKARAL----------SDYMSFKNVVSW-----------------------------T 209
E +A L DY +F +V+S +
Sbjct: 285 EALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDS 344
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
++ Y K R +A +LF + YD ++ +MIT + G +++AR +F+ + K
Sbjct: 345 ALVDMYSKCRRPDDACKLFSDLQAYD--TILLNSMITVYSNCGRIDDARQIFDTMPSKSL 402
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
+S+N+MI G++QN EAL LF M K+ ++ D +L V +AC+++ L G Q
Sbjct: 403 ISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFAR 462
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
G E + + +++ Y +CG + F ++ + V WN+++ +A +GH +A
Sbjct: 463 ATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEA 522
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F QM G P ITF+ +LSAC H G V E F M Y I P EHY+C+VD
Sbjct: 523 LNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVD 582
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+ +RAG LE A + + MP +ADT +W S+L CV + N LG+ AK++ +LDP+NS
Sbjct: 583 LYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGA 642
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAY 544
YV LS +YA W +VR LM ++ + K ++
Sbjct: 643 YVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDTSF 677
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 224/478 (46%), Gaps = 48/478 (10%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
+ N + SR + A+QLF++M ++ +WN +I GY ++G +S LF SMP K+
Sbjct: 44 IGNRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKD 103
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM-- 169
SWN +I+G ++ A F MP +N +N+MI G+ +GR +EA LF+ +
Sbjct: 104 AFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSL 163
Query: 170 -PRRNVISYTAMLD---------GFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
P T +L G + G+ AR + D + F +V+ + ++ Y K
Sbjct: 164 NPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLG-SSLVNLYGKCG 222
Query: 220 RFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
A + M + D F ++A+I+G+ G + +AR +F V +N+MI+GY
Sbjct: 223 DIDSANHVLNLMKEPD--AFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGY 280
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
N A EAL LF+ M + +Q D +T SV +ACS L ++++G Q H V + GF ++
Sbjct: 281 VANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDI 340
Query: 340 ----------SVC---------------------NAVITMYSRCGGILDSELAFRQIHSP 368
S C N++IT+YS CG I D+ F + S
Sbjct: 341 IIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSK 400
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
+L+SWN++I F+Q+ +AL F +M G D + ++SAC + +F
Sbjct: 401 SLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIF 460
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
+ G+ T LVD + G +E ++ M ++D W S+L N
Sbjct: 461 A-RATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRM-MKSDEVPWNSMLMGYATN 516
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 175/427 (40%), Gaps = 44/427 (10%)
Query: 57 ISALSRAGKISAARQLFDQMTTK----DVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
ISA + + Q+F + T D I +++ Y + G ++ + LF M +
Sbjct: 444 ISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDE 503
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V WN M+ G N +A + F M + T+ ++S G +EE + F
Sbjct: 504 VPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYA 563
Query: 169 MP-----RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS-WTVMITGYVKNERFC 222
M + Y+ M+D + + G ++ A L + M K S W+ ++ G V +
Sbjct: 564 MKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNI 623
Query: 223 EARELFYRMPDYDKNVFVVTAMITG----FCKVGMLENAR-LLFERIQPKDCVSFNAMIA 277
+++ R+ D D ++G F G R L++++ PKD SF+ IA
Sbjct: 624 LGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKD-TSFD--IA 680
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV--------- 328
G EE S K + + + + +E Q +
Sbjct: 681 G-------EEGXEGLSSETKEVTKMKQRQNLVLRLVAEKKRECDERDQKFMAARRTLLEF 733
Query: 329 -LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
++I+ GF + + N + +YS+ G DS F I NL+SWN + AF + G E
Sbjct: 734 DMLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELE 793
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+A F +M D +++ +++S G +++ F M K GI PS Y+ L
Sbjct: 794 RARDVFDEMP----KRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKA-GIRPSGFTYSTL 848
Query: 448 VDILSRA 454
+ +S A
Sbjct: 849 LSFVSSA 855
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 13/245 (5%)
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCG 353
M+ +D+ +L +C+ + GR H+L +++G + +S+ N ++ MYSRC
Sbjct: 1 MVDLDLH----SLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCN 56
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ +++ F ++ N SWNT+I + + G K+L F M D ++ ++S
Sbjct: 57 SMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMP----HKDAFSWNVVIS 112
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSS--EHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
G + + LF M GI +S Y C G L K + F
Sbjct: 113 GFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVG-LFKDLSLNPLERFCG 171
Query: 472 DTGVWGSLLAACVINLNVELG-ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
DT V +++ AC ++ G ++ A+ + + +S + L NLY G V
Sbjct: 172 DTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVL 231
Query: 531 LLMKE 535
LMKE
Sbjct: 232 NLMKE 236
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 252/437 (57%), Gaps = 4/437 (0%)
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
A++ + K G+++ A +LF++M R+ +S+TA++ G+++ G++D A L D M K+ +
Sbjct: 128 ALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAA 187
Query: 208 WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ MI YVK C AR+LF MP+ ++V T MI G+ G L++AR LF+ + K
Sbjct: 188 FNTMIDAYVKLGDMCSARKLFDEMPE--RSVVSWTIMIYGYSSNGNLDSARSLFDAMPEK 245
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDDATLVSVFTACSALQLLNEGRQS 326
+ S+NAMI+GY QN EAL+LF M ++PD+ T+VSV A + L L+ G
Sbjct: 246 NLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWV 305
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H V R + +V A+I MY++CG I+ S F + SWN +I AFA +G
Sbjct: 306 HRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRA 365
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++AL F +M GF P+ IT + +LSAC H+G V E F+ M + +G+ P EHY C
Sbjct: 366 KEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGC 424
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VD+L RAG L++A ++ + MP+EA+ + S L AC + +V E K+ +++ N
Sbjct: 425 MVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWN 484
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
Y+ML NLYA W++ V+ LM+ GV K+ S IE+ ++V F+ GD HP
Sbjct: 485 DGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKW 544
Query: 567 DKIHLELKRASVQMKSV 583
+ IH L + V MK
Sbjct: 545 EAIHSVLGQLWVHMKGT 561
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 38/318 (11%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ A++ Y + G + ++ LF M ++ VSW +I G + + +D+A F M
Sbjct: 122 DLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMI 181
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E+++A +N MI ++K G + A +LF++MP R+V+S+T M+ G+ G +D AR+L D
Sbjct: 182 EKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDA 241
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRM-------PD------------------- 233
M KN+ SW MI+GY +N++ EA +LF+ M PD
Sbjct: 242 MPEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDL 301
Query: 234 ------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
D+ V TA+I + K G + +R +F+ + K+ S+NA+I +A
Sbjct: 302 GGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAI 361
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG A+EAL LF M P++ T++ V +AC+ L+ EG++ + G +
Sbjct: 362 NGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTPKIEH 421
Query: 342 CNAVITMYSRCGGILDSE 359
++ + R G + ++E
Sbjct: 422 YGCMVDLLGRAGCLQEAE 439
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 11/233 (4%)
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVS 309
G++ R+ R D N+MI Y E+ L+ + + PD T
Sbjct: 34 AGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSV 93
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ +C+ + EG++ H V+ GF ++ A++ MY++ G + + F ++ +
Sbjct: 94 LAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRS 153
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
VSW +I + + G + A F QM + D F +++ A G + + LF+
Sbjct: 154 QVSWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAFNTMIDAYVKLGDMCSARKLFD 209
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
M + S +T ++ S G L+ A + MP E + W ++++
Sbjct: 210 EMPE-----RSVVSWTIMIYGYSSNGNLDSARSLFDAMP-EKNLFSWNAMISG 256
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 275/529 (51%), Gaps = 16/529 (3%)
Query: 66 ISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV-----SWNCMI 119
I AR+LFDQ + D N++I Y + +S ++ + + + ++ M
Sbjct: 26 IGYARKLFDQRPHREDSFLCNSMIKAYLETRHYNDSFAFYRDLRKETCLAPDNFTFTTMT 85
Query: 120 AGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
C + + + + ++ + K G++ A +F++MP+R+ +
Sbjct: 86 KSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKFGKMGCARNVFDEMPQRSEV 145
Query: 176 SYTAMLDGFMKKGEVDKARALSDYM-SFKNVVSWTVMITGYVKNERFCEARELFYRMPDY 234
S+TA++ G+++ GE+D A L D M K+VV + M+ G+VK+ AR LF M
Sbjct: 146 SWTALICGYVRFGELDLASKLFDQMPQVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTH- 204
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
K V T MI G+C +++AR LF+ + ++ VS+N MI GY QN +EA+RLF
Sbjct: 205 -KTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYCQNKQPQEAIRLFQE 263
Query: 295 M-IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + PDD T++SV A S L+ G H V R + V VC A++ MYS+CG
Sbjct: 264 MQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKNLDKKVKVCTAILDMYSKCG 323
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ F ++ + SWN +I +A +G+ AL F M PD IT L+++S
Sbjct: 324 EIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAALDLFLTMAKEE-KPDEITMLAVIS 382
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H G V E F++M K +G+ EHY C+VD+L RAG L++A + MPF+ +
Sbjct: 383 ACNHGGLVEEGRKWFQMMRK-FGLNAKIEHYGCMVDLLGRAGNLKQAEHLITNMPFKPNG 441
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+ S L+AC ++E E KK EL+PQN YV+L NLYAA W D V+ +M
Sbjct: 442 IILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNMM 501
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
++ K+ S IEI V F+ GD +HP IHL L++ V MK
Sbjct: 502 RKNEAKKEVGCSLIEINYIVSEFISGDTTHPHRQSIHLVLEKLLVHMKE 550
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 181/352 (51%), Gaps = 16/352 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
++V+ + ++ GK+ AR +FD+M + ++W A+I GY + G L + LF MP
Sbjct: 113 MYVSTGVVDMYAKFGKMGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQ 172
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
VK++V +N M+ G + + + A F M + T+ MI G+ ++ A +LF+
Sbjct: 173 VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDA 232
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF------KNVVSWTVMI----TGYVKN 218
MP RN++S+ M+ G+ + + +A L M +V +V+ TG +
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 219 ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+C F + + DK V V TA++ + K G +E A+ +F+ + K S+NAMI G
Sbjct: 293 GEWCHC---FVQRKNLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHG 349
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
YA NG A AL LF M K + +PD+ T+++V +AC+ L+ EGR+ ++ + G A
Sbjct: 350 YALNGNAHAALDLFLTMAK-EEKPDEITMLAVISACNHGGLVEEGRKWFQMMRKFGLNAK 408
Query: 339 VSVCNAVITMYSRCGGILDSE-LAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+ ++ + R G + +E L PN + ++ ++A Q+ E+A
Sbjct: 409 IEHYGCMVDLLGRAGNLKQAEHLITNMPFKPNGIILSSFLSACGQYKDIERA 460
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 123/284 (43%), Gaps = 14/284 (4%)
Query: 235 DKNVFVVTA-MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ NV + T ++ VG+ +L +R +D N+MI Y + ++ +
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPHREDSFLCNSMIKAYLETRHYNDSFAFYR 66
Query: 294 GMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ K + PD+ T ++ +C+ + +G Q H + R+GF A++ V V+ MY++
Sbjct: 67 DLRKETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKF 126
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + + F ++ + VSW +I + + G + A F QM D + + +++
Sbjct: 127 GKMGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQV---KDVVIYNAMM 183
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
+G + + LF+ M I +T ++ + ++ A ++ MP E +
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHKTVIT-----WTTMIHGYCNSNDIDSARKLFDAMP-ERN 237
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMR---ELDPQNSAVYVML 513
W +++ N + ++M+ LDP + + +L
Sbjct: 238 LVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVL 281
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/553 (30%), Positives = 301/553 (54%), Gaps = 38/553 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ + NA ++ + I A +F M +KD ++WN++I+G N +E+ + F +M
Sbjct: 491 ISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKR 550
Query: 110 KNIVSWN---------CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+V N C G + R + F+ + + + NA+++ + + +
Sbjct: 551 NGMVPSNFSVISTLSSCSSLGWLTLGRQIHG-EGFKWGLDLDVSVSNALLTLYAETDSIN 609
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM------------SFKNVV-- 206
E ++F QMP + +S+ + + G + K E +AL ++ +F N++
Sbjct: 610 ECQKVFFQMPEYDQVSWNSFI-GALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAA 668
Query: 207 --SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
S++V+ G+ + L + D N + A++ + K +E+ ++F R+
Sbjct: 669 VSSFSVLGLGH-------QIHALILKYSVADDNA-IENALLAFYGKCEQMEDCEIIFSRM 720
Query: 265 -QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
+ +D VS+N+MI+GY +G+ +A+ L M++ + D T +V +AC+++ L G
Sbjct: 721 SERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERG 780
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+ H +R E++V V +A++ MY++CG I + F + N+ SWN++I+ +A+H
Sbjct: 781 MEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARH 840
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
GH +KAL F++M +G PD +TF+ +LSAC H G V+E F+ M +VYG+ P EH
Sbjct: 841 GHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEH 900
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI--NLNVELGELAAKKMRE 501
++C+VD+L RAG ++K + MP + + +W ++L AC N ELG+ AAK + E
Sbjct: 901 FSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIE 960
Query: 502 LDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDM 561
L+PQN+ YV+LSN++AA G W DV RL M++ V K SW+ + + VH F+ GD
Sbjct: 961 LEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQ 1020
Query: 562 SHPCIDKIHLELK 574
+HP +KI+ +LK
Sbjct: 1021 THPEKEKIYEKLK 1033
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 220/452 (48%), Gaps = 40/452 (8%)
Query: 63 AGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI---------- 112
+G I A ++FD++ ++ +TWN+II+ Y + G + LF M ++ +
Sbjct: 292 SGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYT 351
Query: 113 ----VSWNCMIAGC----IDN--DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEA 162
V+ C +A C ++ RI+ ++ R+ +A+++GF ++G ++ A
Sbjct: 352 LCSLVTAACSLADCGLVLLEQMLTRIE------KSGFLRDLYVGSALVNGFARYGLMDCA 405
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKA----RALSDYMSFKNVVSWTVMITGYVKN 218
+F+QM RN ++ ++ G ++ + ++A + + D + N S V+++ + +
Sbjct: 406 KMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEI-NSESLVVLLSTFTEF 464
Query: 219 ERFCEARE-------LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
E + +R D + + A++ + K ++NA +F+ + KD VS
Sbjct: 465 SNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVS 524
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N+MI+G N EEA+ F M + M P + +++S ++CS+L L GRQ H
Sbjct: 525 WNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGF 584
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH-GHYEKAL 390
+ G + +VSV NA++T+Y+ I + + F Q+ + VSWN+ I A A++ +AL
Sbjct: 585 KWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQAL 644
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
+F +M G+ P+ +TF+++L+A + + L++K Y + + L+
Sbjct: 645 KYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILK-YSVADDNAIENALLAF 703
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ Q+E I M D W S+++
Sbjct: 704 YGKCEQMEDCEIIFSRMSERRDEVSWNSMISG 735
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 206/469 (43%), Gaps = 84/469 (17%)
Query: 21 LRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKD 80
+R+L+ +S F H + +L F S+L A + QL+ T D
Sbjct: 117 MRLLNKYNSTYTFLRHYTFSHSQLQQLDSEFDRYKTSSSLYDANHLHL--QLYKTGFTDD 174
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE 140
V N +I Y + G L ++ LF MP KN+VSW+C+I+G N D+A F+ +
Sbjct: 175 VFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGV-- 232
Query: 141 RNTATYNAMISGFL-KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK------------ 187
+ SG L H + A R +Q I + F+ K
Sbjct: 233 --------ISSGLLPNHFAVGSALRACQQCGSTG-IKLGMQIHAFICKLPCVSDMILSNV 283
Query: 188 ---------GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------- 231
G +D A + D + F+N V+W +I+ Y + A +LF M
Sbjct: 284 LMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVEL 343
Query: 232 ---PD---------------------------------YDKNVFVVTAMITGFCKVGMLE 255
P+ + ++++V +A++ GF + G+++
Sbjct: 344 NLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMD 403
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A+++F+++ ++ V+ N ++ G A+ EEA ++F M + ++ + +LV + + +
Sbjct: 404 CAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTFT 462
Query: 316 ALQLLNEGRQS----HVLVIRNGF-EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
L EG++ H + R+G +A +S+ NA++ MY +C I ++ F+ + S +
Sbjct: 463 EFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDT 522
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
VSWN++I+ + +E+A+ F M NG P + +S LS+C G
Sbjct: 523 VSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLG 571
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 143/294 (48%), Gaps = 21/294 (7%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ +VF +I + ++G L +AR LF+ + K+ VS++ +I+GY QN + +EA LF
Sbjct: 171 FTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFK 230
Query: 294 GMIKMDMQPDDATLVSVFTAC-----SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM 348
G+I + P+ + S AC + ++L G Q H + + +++ + N +++M
Sbjct: 231 GVISSGLLPNHFAVGSALRACQQCGSTGIKL---GMQIHAFICKLPCVSDMILSNVLMSM 287
Query: 349 YSRC-GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD----P 403
YS C G I D+ F +I N V+WN+II+ + + G A FS M + G + P
Sbjct: 288 YSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRP 347
Query: 404 DGITFLSLLS-ACGHAGKVNESMDLFELM---VKVYGIIPSSEHYTCLVDILSRAGQLEK 459
+ T SL++ AC A + + L E M ++ G + + LV+ +R G ++
Sbjct: 348 NEYTLCSLVTAACSLA---DCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDC 404
Query: 460 AWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
A I + M ++ + L+ E K+M++L NS V+L
Sbjct: 405 AKMIFKQM-YDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVL 457
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 205/475 (43%), Gaps = 83/475 (17%)
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE-------------- 161
N +AGC D + A F + + +TY + H +L++
Sbjct: 100 NTCVAGC---DFPEMASHLFMRLLNKYNSTYTFLRHYTFSHSQLQQLDSEFDRYKTSSSL 156
Query: 162 --ATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
A L Q+ + +V +++ +++ G + AR L D M KN+VSW+ +I+GY
Sbjct: 157 YDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGY 216
Query: 216 VKNERFCEARELFYRMPDYD--KNVFVVTAMI--------TG----------FCKV---- 251
+N EA LF + N F V + + TG CK+
Sbjct: 217 TQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVS 276
Query: 252 ----------------GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
G +++A +F+ I+ ++ V++N++I+ Y + G A A +LFS M
Sbjct: 277 DMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVM 336
Query: 296 ----IKMDMQPDDATLVSVFT-ACS----ALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
++++++P++ TL S+ T ACS L LL Q + ++GF ++ V +A++
Sbjct: 337 QMEGVELNLRPNEYTLCSLVTAACSLADCGLVLL---EQMLTRIEKSGFLRDLYVGSALV 393
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
++R G + +++ F+Q++ N V+ N ++ A+ E+A F +M + + +
Sbjct: 394 NGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK-DLVEINSE 452
Query: 407 TFLSLLSACGHAGKVNE----SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
+ + LLS + E ++ + + + LV++ + ++ A
Sbjct: 453 SLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACS 512
Query: 463 ITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE--LDPQNSAVYVMLSN 515
+ Q MP DT W S+++ N E M+ + P N +V LS+
Sbjct: 513 VFQLMP-SKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSS 566
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C +R V V +A + ++ GKI A + F+ M +++ +WN++I+GY ++G Q+
Sbjct: 786 CAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQK 845
Query: 100 SKNLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE-----RNTATYNAMI 150
+ +F M + V++ +++ C +D+ + +F++M E ++ M+
Sbjct: 846 ALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMV 905
Query: 151 SGFLKHGRLEEATRLFEQMP 170
+ G +++ + MP
Sbjct: 906 DLLGRAGDVKKIEDFIKTMP 925
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 292/550 (53%), Gaps = 35/550 (6%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
I+A G ++ A + F +++ D++ WNAII GY Q + ++ M + V N
Sbjct: 26 INACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQ-VHPN 84
Query: 117 C-----MIAGC-------IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
C ++ C I F Y N N+++S + K G++ A
Sbjct: 85 CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFG---SNVFVQNSLVSMYAKFGQISYARI 141
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNER 220
+F+++ R V+S+T+++ G+++ G+ +A + M NV ++ ++T Y E
Sbjct: 142 VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVED 201
Query: 221 FCEARELFYRM--------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ + + + PD +V ++ T + K G++E AR F R++ + + +
Sbjct: 202 LGQGKSIHGLVTKLGLEFEPD------IVISLTTMYAKRGLVEVARFFFNRMEKPNLILW 255
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NAMI+GYA NG EEA++LF MI +++ D T+ S A + + L R + +
Sbjct: 256 NAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISK 315
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+ + + V +I MY++CG I + F ++ ++V W+ +I + HGH ++A+
Sbjct: 316 SEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICL 375
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
+++M G P+ TF+ LL+AC ++G V E +LF LM +GI P +HY+C+VD+L
Sbjct: 376 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLG 434
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG L +A+ MP + VWG+LL+AC I+ V LGE+AA+++ LDP N+ YV
Sbjct: 435 RAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQ 494
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
LSNLYA+A +W V VRL+M ++G+ K +S IEI + F GD SHP +I E
Sbjct: 495 LSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEE 554
Query: 573 LKRASVQMKS 582
L R ++K+
Sbjct: 555 LDRLEKRLKA 564
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 169/349 (48%), Gaps = 15/349 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV N+ +S ++ G+IS AR +FD++ + V++W +II+GY QNG E+ N+F+ M
Sbjct: 120 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 179
Query: 110 KNI-VSWNCMIAGCIDNDRIDD--AFDYFQAMPERNTATYN-----AMISGFLKHGRLEE 161
N+ W +++ ++D + + + ++ + + K G +E
Sbjct: 180 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 239
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGY 215
A F +M + N+I + AM+ G+ G ++A L M KN+ + V+ +
Sbjct: 240 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 299
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
V + + + +Y + FV T +I + K G + AR +F+R+ KD V ++ M
Sbjct: 300 VGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 359
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I GY +G +EA+ L++ M + + P+D T + + TAC L+ EG + L+ +G
Sbjct: 360 IMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGI 419
Query: 336 EANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
E + + V+ + R G + + + P + W +++A H
Sbjct: 420 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 129/271 (47%), Gaps = 5/271 (1%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
F++ I G + A F + D + +NA+I GY Q + + +R++ M
Sbjct: 20 FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 79
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ P+ T + V AC + G+Q H + GF +NV V N++++MY++ G I +
Sbjct: 80 QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 139
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+ F ++H +VSW +II+ + Q+G +AL F +M PD I +S+++A +
Sbjct: 140 RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 199
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ + + L+ K+ G+ + L + ++ G +E A M + + +W +
Sbjct: 200 EDLGQGKSIHGLVTKL-GLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNA 257
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAV 509
+++ N GE A K RE+ +N V
Sbjct: 258 MISGYA---NNGYGEEAIKLFREMITKNIRV 285
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 247/419 (58%), Gaps = 16/419 (3%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
N N ++ ++ H L +A LF++MP++N +S++ M+ GF+K GE + Y +
Sbjct: 1114 NLTVANKLLYVYVHHKCLTDAYALFDEMPQKNPVSWSIMIGGFVKVGEF-----MQCYKT 1168
Query: 202 FKNVVSWTVMITGY-----VKNERFCEA----RELFYRMPDYDKNV--FVVTAMITGFCK 250
FK ++ V Y +K R A R + + Y ++ FV A++ + K
Sbjct: 1169 FKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAK 1228
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
++E+A+LLF+ + KD V++ MI GYA+ G A+E+L LF + + PD +VS+
Sbjct: 1229 CKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSI 1288
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
AC+ L +N+ R H V RN F +V + A+I MY++CG + + F +H N+
Sbjct: 1289 VNACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNV 1348
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
+SW+ +IAA+ HG +KAL F M +G P+ ITF+SLL AC HAG V + + L L
Sbjct: 1349 ISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSL 1408
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M + +G+ P +H+TC+VD+L RAGQL +A++ + M E D G+W SLL AC I+ ++
Sbjct: 1409 MWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIHKRID 1468
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
L E AAK + EL PQN Y++LSN+YA AG W+DV ++R LM ++ + K Y+WIE+
Sbjct: 1469 LAEKAAKSLLELQPQNPGNYILLSNIYANAGQWKDVAKIRDLMTKRKLKKIPGYTWIEL 1527
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 207/513 (40%), Gaps = 140/513 (27%)
Query: 7 FHQTYLKRILFPPILRIL--STPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAG 64
FHQ + + PP+ +IL S PD P NCLI S L
Sbjct: 1055 FHQ---EATIDPPVTQILKISNPDFSFFMDP---NCLI---------------STLLNCK 1093
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
I +QL +TT V L+ ++ V N + + + C+
Sbjct: 1094 NICQIKQLHALITTNSV---------------------LYNNLTVANKLLYVYVHHKCLT 1132
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI--SYT---- 178
DA+ F MP++N +++ MI GF+K G + + F+++ R V +YT
Sbjct: 1133 -----DAYALFDEMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFV 1187
Query: 179 ---------------------------------AMLDGFMKKGEVDKARALSDYMSFKNV 205
A++D + K ++ A+ L D M K++
Sbjct: 1188 IKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDL 1247
Query: 206 VSWTVMITGYVKNERFCEARELFYRM------PD-------------------------- 233
V+WTVMI GY + E+ LF + PD
Sbjct: 1248 VTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEY 1307
Query: 234 -----YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
+ +V + TAMI + K G +++AR +F+ + K+ +S++AMIA Y +G ++A
Sbjct: 1308 VNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKA 1367
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVIT 347
L LF M+ + P++ T VS+ ACS L+ +G L+ + G ++ ++
Sbjct: 1368 LELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVD 1427
Query: 348 MYSRCGGILDSELAFRQIHSPNLVS----WNTIIAAFAQHGHY---EKALIFFSQMGLNG 400
+ R G + + AFR I + + W++++ A H EKA S + L
Sbjct: 1428 LLGRAGQLTE---AFRFIENMTVEKDEGLWSSLLGACRIHKRIDLAEKAA--KSLLELQP 1482
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+P LS + A +AG+ + + +LM K
Sbjct: 1483 QNPGNYILLSNIYA--NAGQWKDVAKIRDLMTK 1513
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 286/547 (52%), Gaps = 15/547 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V N+ + + + + A LF M KD +T+NA++TGY + GF ++ NLF M
Sbjct: 174 LMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQD 233
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER--------NTATYNAMISGFLKHGRLEE 161
A + D ++ Q + N NA++ + KH R+ E
Sbjct: 234 LGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVE 293
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSF----KNVVSWTVMITGYVK 217
A +LF +MP + ISY ++ G V+++ L + F + + +++
Sbjct: 294 ARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAAN 353
Query: 218 NERFCEARELFYR--MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ R++ + + D V V +++ + K A +F + + V + A+
Sbjct: 354 SLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTAL 413
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+GY Q G+ E+ L+LF M + + D AT S+ AC+ L L G+Q H +IR+G
Sbjct: 414 ISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGC 473
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+NV +A++ MY++CG I ++ F+++ N VSWN +I+A+AQ+G AL F Q
Sbjct: 474 LSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQ 533
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M +G P+ ++FLS+L AC H G V E + F M +VY + P EHY +VD+L R+G
Sbjct: 534 MIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSG 593
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDP-QNSAVYVMLS 514
+ ++A ++ MPFE D +W S+L +C I+ N EL AA ++ + +++A YV +S
Sbjct: 594 RFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMS 653
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+YAAAG W V +V+ ++E+G+ K AYSW+EI K H F D SHP +I +L
Sbjct: 654 NIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLD 713
Query: 575 RASVQMK 581
QM+
Sbjct: 714 ELEKQME 720
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 227/481 (47%), Gaps = 53/481 (11%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N ++ + G + AAR+LFD+M K+VI+ N +I GY ++G L +++LF SM +++V
Sbjct: 46 NFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVV 105
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLFEQM 169
+W +I G ++R +AF+ F M + T ++SGF + + E ++ +
Sbjct: 106 TWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHV 165
Query: 170 PR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
+ ++ ++LD + K + A L +M+ K+ V++ ++TGY K +A
Sbjct: 166 VKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAI 225
Query: 226 ELFYRMPD-------------------------------------YDKNVFVVTAMITGF 248
LF++M D + NVFV A++ +
Sbjct: 226 NLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFY 285
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM--IKMD-MQPDDA 305
K + AR LF + D +S+N +I A NG EE+L LF + + D Q A
Sbjct: 286 SKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFA 345
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
TL+S+ A ++L L GRQ H I + V V N+++ MY++C ++ F +
Sbjct: 346 TLLSI--AANSLN-LEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADL 402
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+ V W +I+ + Q G +E L F +M D T+ S+L AC + +
Sbjct: 403 AHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGK 462
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
L +++ G + + + LVD+ ++ G +++A Q+ Q MP ++ W +L++A
Sbjct: 463 QLHSRIIRS-GCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVR-NSVSWNALISAYAQ 520
Query: 486 N 486
N
Sbjct: 521 N 521
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 163/341 (47%), Gaps = 29/341 (8%)
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF 132
FD T + +N + + Q G L ++ LF MP KN++S N MI G + + + A
Sbjct: 38 FDPNTCR----FNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTAR 93
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
F +M +R+ T+ +I G+ +H R EA LF M R ++ +
Sbjct: 94 SLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVP-----------DHITL 142
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
A LS + F++ V+ + G+V YD + V +++ +CK
Sbjct: 143 ATLLSGFTEFES-VNEVAQVHGHVVK-------------VGYDSTLMVCNSLLDSYCKTR 188
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
L A LF+ + KD V+FNA++ GY++ G +A+ LF M + +P + T +V T
Sbjct: 189 SLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLT 248
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
A + + G+Q H V++ F NV V NA++ YS+ I+++ F ++ + +S
Sbjct: 249 AGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGIS 308
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+N +I A +G E++L F ++ FD F +LLS
Sbjct: 309 YNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLS 349
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG----F 96
+IR VF +A + ++ G I A Q+F +M ++ ++WNA+I+ Y QNG
Sbjct: 468 IIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHA 527
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMIS 151
L+ + + S N VS+ ++ C +++ YF +M E Y +M+
Sbjct: 528 LRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVD 587
Query: 152 GFLKHGRLEEATRLFEQMP 170
+ GR +EA +L +MP
Sbjct: 588 MLCRSGRFDEAEKLMARMP 606
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 292/550 (53%), Gaps = 35/550 (6%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
I+A G ++ A + F +++ D++ WNAII GY Q + ++ M + V N
Sbjct: 41 INACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQ-VHPN 99
Query: 117 C-----MIAGC-------IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
C ++ C I F Y N N+++S + K G++ A
Sbjct: 100 CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFG---SNVFVQNSLVSMYAKFGQISYARI 156
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNER 220
+F+++ R V+S+T+++ G+++ G+ +A + M NV ++ ++T Y E
Sbjct: 157 VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVED 216
Query: 221 FCEARELFYRM--------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
+ + + + PD +V ++ T + K G++E AR F R++ + + +
Sbjct: 217 LGQGKSIHGLVTKLGLEFEPD------IVISLTTMYAKRGLVEVARFFFNRMEKPNLILW 270
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
NAMI+GYA NG EEA++LF MI +++ D T+ S A + + L R + +
Sbjct: 271 NAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISK 330
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+ + + V +I MY++CG I + F ++ ++V W+ +I + HGH ++A+
Sbjct: 331 SEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICL 390
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
+++M G P+ TF+ LL+AC ++G V E +LF LM +GI P +HY+C+VD+L
Sbjct: 391 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLG 449
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG L +A+ MP + VWG+LL+AC I+ V LGE+AA+++ LDP N+ YV
Sbjct: 450 RAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQ 509
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
LSNLYA+A +W V VRL+M ++G+ K +S IEI + F GD SHP +I E
Sbjct: 510 LSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEE 569
Query: 573 LKRASVQMKS 582
L R ++K+
Sbjct: 570 LDRLEKRLKA 579
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 169/349 (48%), Gaps = 15/349 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV N+ +S ++ G+IS AR +FD++ + V++W +II+GY QNG E+ N+F+ M
Sbjct: 135 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 194
Query: 110 KNI-VSWNCMIAGCIDNDRIDD--AFDYFQAMPERNTATYN-----AMISGFLKHGRLEE 161
N+ W +++ ++D + + + ++ + + K G +E
Sbjct: 195 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 254
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGY 215
A F +M + N+I + AM+ G+ G ++A L M KN+ + V+ +
Sbjct: 255 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 314
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
V + + + +Y + FV T +I + K G + AR +F+R+ KD V ++ M
Sbjct: 315 VGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 374
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I GY +G +EA+ L++ M + + P+D T + + TAC L+ EG + L+ +G
Sbjct: 375 IMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGI 434
Query: 336 EANVSVCNAVITMYSRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQH 383
E + + V+ + R G + + + P + W +++A H
Sbjct: 435 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 129/271 (47%), Gaps = 5/271 (1%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
F++ I G + A F + D + +NA+I GY Q + + +R++ M
Sbjct: 35 FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 94
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ P+ T + V AC + G+Q H + GF +NV V N++++MY++ G I +
Sbjct: 95 QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 154
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+ F ++H +VSW +II+ + Q+G +AL F +M PD I +S+++A +
Sbjct: 155 RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 214
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ + + L+ K+ G+ + L + ++ G +E A M + + +W +
Sbjct: 215 EDLGQGKSIHGLVTKL-GLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNA 272
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAV 509
+++ N GE A K RE+ +N V
Sbjct: 273 MISGYA---NNGYGEEAIKLFREMITKNIRV 300
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 226/360 (62%), Gaps = 2/360 (0%)
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNG 283
A++LF ++ +N+ V+TAMI+G+ +VG +E+ARL+F++++ KD V ++AMI+GYA++
Sbjct: 2 AQKLFTKISS--RNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESD 59
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCN 343
+EAL LFS M ++PD T++SV +AC+ L +L+ + H+ V +NG + V N
Sbjct: 60 KPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNN 119
Query: 344 AVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
A+I MY++CG + + F ++ S N++SW ++I AFA HG AL FF QM P
Sbjct: 120 ALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKP 179
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+G+TF+ +L AC HAG V E F M + I P EHY C+VD+ RA L A ++
Sbjct: 180 NGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALEL 239
Query: 464 TQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW 523
+ MP + +WGSL+AAC I+ ELGE AAK++ EL+P + V LSN+YA W
Sbjct: 240 VETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRW 299
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+DV +R LMK++G++K+ S IE+ N+V+ F+ D H DKI+ +L ++K V
Sbjct: 300 QDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLV 359
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 23/289 (7%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L S++ + V A IS SR G++ AR +FDQM KD++ W+A+I+GY ++ QE+
Sbjct: 5 LFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEA 64
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERN-----TATYNAMIS 151
NLF M V I V+ +I+ C +D A + ++N NA+I
Sbjct: 65 LNLFSEMQVFGIKPDQVTILSVISACARLGVLDRA-KWIHMYVDKNGLGGALPVNNALID 123
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ K G L A +FE+M RNVIS+T+M++ F G+ A M +N+ V
Sbjct: 124 MYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVT 183
Query: 212 ITGYVKNERFC----EARELFYRMPDYDKNVFV----VTAMITGFCKVGMLENARLLFER 263
G + E R F M + + N+ M+ F + +L +A L E
Sbjct: 184 FVGVLYACSHAGLVEEGRRTFASMTN-EHNITPKHEHYGCMVDLFGRANLLRDALELVET 242
Query: 264 IQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPD-DATLVSV 310
+ + V + +++A +G E L F+ ++++PD D LV +
Sbjct: 243 MPLAPNVVIWGSLMAACQIHG--ENELGEFAAKQVLELEPDHDGALVQL 289
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 20/262 (7%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
A++LF ++++++++ A+I+GY + G +++++ +F M K++V W+ MI+G ++D+
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 129 DDAFDYFQAMP----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY----TAM 180
+A + F M + + T ++IS + G L+ A + + + + A+
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNAL 121
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD--KNV 238
+D + K G + AR + + M +NV+SWT MI + + A + FY+M D + N
Sbjct: 122 IDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNG 181
Query: 239 FVVTAMITGFCKVGMLENARLLF------ERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
++ G++E R F I PK + M+ + + + +AL L
Sbjct: 182 VTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKH-EHYGCMVDLFGRANLLRDALELV 240
Query: 293 SGMIKMDMQPDDATLVSVFTAC 314
M + P+ S+ AC
Sbjct: 241 E---TMPLAPNVVIWGSLMAAC 259
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 170/564 (30%), Positives = 281/564 (49%), Gaps = 46/564 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV +A + + ++ AR++FD M +D + WN +I G +N +S LF+ M
Sbjct: 143 VFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVA 202
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA-----------------TYNAMISG 152
+ +D+ + + E +IS
Sbjct: 203 DGVR---------VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISL 253
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+ K G + A LF ++ R ++I+Y AM+ GF G + + L + F + I
Sbjct: 254 YSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTI 313
Query: 213 TGYVKNER-------------FCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
G + FC + N V TA + K+ ++ AR
Sbjct: 314 VGLIPLHSPFGHLHLACSIHGFCVKSGIIL-------NPTVSTAFTAIYNKLNEIDLARH 366
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
LF+ K V++NAMI+GY QNG E A+ LF M+K + P+ T+ ++ +AC+ L
Sbjct: 367 LFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGS 426
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L+ G+ H L+ E N+ V A++ MY++CG I ++ F + N V+WNT+I
Sbjct: 427 LSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFG 486
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ HG+ +AL +++M G++P +TFLS+L AC HAG V E ++F MV Y I P
Sbjct: 487 YGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEP 546
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
EHY C+VDIL R+GQLEKA + + MP E VWG+LL AC+I+ + ++ LA++++
Sbjct: 547 LIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERL 606
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
ELDP + YV+LSN+Y+ + +R ++K++ + K + IE+ H F+ G
Sbjct: 607 FELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSG 666
Query: 560 DMSHPCIDKIHLELKRASVQMKSV 583
D SH I+ +L++ + +M+ +
Sbjct: 667 DRSHSHATDIYAKLEKLTGKMREM 690
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 194/445 (43%), Gaps = 47/445 (10%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM- 138
D+ T + + + ++ LF S+P +I +N ++ G ND + + +
Sbjct: 43 DLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLR 102
Query: 139 ------PERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
P+ T + KH L A + + NV +A++D + K V
Sbjct: 103 RNTNLSPDNFTYAFAVAACSNDKHLMLLHAHSIIDGYGS-NVFVGSALVDLYCKFSRVVY 161
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV-------------- 238
AR + D M ++ V W MI G VKN F ++ +LF M V
Sbjct: 162 ARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAE 221
Query: 239 -----------------------FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+V+T +I+ + K G + ARLLF RI D +++NAM
Sbjct: 222 LQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAM 281
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+G+ NG E +++LF ++ + +T+V + S L+ H +++G
Sbjct: 282 ISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGI 341
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
N +V A +Y++ I + F + +V+WN +I+ + Q+G E A+ F +
Sbjct: 342 ILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKE 401
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M F P+ +T ++LSAC G ++ + L +K + P+ T LVD+ ++ G
Sbjct: 402 MMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHL-IKSENLEPNIYVSTALVDMYAKCG 460
Query: 456 QLEKAWQITQGMPFEADTGVWGSLL 480
+ +AWQ+ M E +T W +++
Sbjct: 461 NISEAWQLFDSMS-EKNTVTWNTMI 484
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 167/377 (44%), Gaps = 8/377 (2%)
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK 203
AT + A LF +P+ ++ + ++ GF + +L ++
Sbjct: 45 ATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRN 104
Query: 204 NVVSWTVMITGYV----KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
+S + N++ + Y NVFV +A++ +CK + AR
Sbjct: 105 TNLSPDNFTYAFAVAACSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARK 164
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F+ + +D V +N MI G +N +++++LF M+ ++ D +T+ +V A + LQ
Sbjct: 165 VFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQE 224
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L G L ++ GF V +I++YS+CG + + L FR+I+ P+L+++N +I+
Sbjct: 225 LKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISG 284
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
F +G E ++ F ++ +G T + L+ G ++ + + VK GII
Sbjct: 285 FTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKS-GIIL 343
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+ T I ++ +++ A + P E W ++++ N + E K+M
Sbjct: 344 NPTVSTAFTAIYNKLNEIDLARHLFDESP-EKTVVAWNAMISGYTQNGSTETAISLFKEM 402
Query: 500 --RELDPQNSAVYVMLS 514
E P + +LS
Sbjct: 403 MKTEFTPNAVTITTILS 419
>gi|357490817|ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517031|gb|AES98654.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 179/586 (30%), Positives = 303/586 (51%), Gaps = 63/586 (10%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
+ N+ ++ ++ G++ A+++FD M +D + WNA+I+G+ QNG + +++ F +M
Sbjct: 220 LRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDG 279
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEEAT 163
+ V+WN +I+ D A D + M A T+ +MISGF + GR+ A
Sbjct: 280 VEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHAL 339
Query: 164 RLFEQM---------------------------------------PRRNVISYTAMLDGF 184
L ++M NV+ +++D +
Sbjct: 340 DLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMY 399
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC-EARELFYRMPDYDK--NVFVV 241
K G++ A+ + D MS ++V SW +I GY + FC +A ELF +M + D N+
Sbjct: 400 CKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQ-AGFCGKAHELFMKMQESDSPPNIITW 458
Query: 242 TAMITGFCKVGMLENARLLFERIQP-----KDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
MITG+ + G + A LF+ I+ ++ S+N++I+G+ Q+G ++AL++F M
Sbjct: 459 NIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQ 518
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ P+ T++S+ C+ L + ++ H +R + +SV N +I Y++ G ++
Sbjct: 519 FCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLM 578
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
S+ F ++ + VSWN++++++ HG E AL F QM G P+ TF S+L A G
Sbjct: 579 YSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYG 638
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
HAG V+E +F + K Y + EHY+ +V +L R+G+L +A Q MP E ++ VW
Sbjct: 639 HAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVW 698
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
G+LL AC I+ N + LA K+M E +P N+ +LS Y+ G + E+
Sbjct: 699 GALLTACRIHRNFGVAVLAGKRMLEFEPGNNITRHLLSQAYSLCGKFEPEG-------EK 751
Query: 537 GVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
V K SWIE N VH F+ GD S+P +DK+H LKR +V +K+
Sbjct: 752 AVNKPIGQSWIERNNVVHTFVVGDQSNPYLDKLHSWLKRVAVNVKT 797
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 195/397 (49%), Gaps = 14/397 (3%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY 146
+++ Y + G L ++ +F M V+N+ +W+ MI GC N + F AM
Sbjct: 123 LVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPD 182
Query: 147 NAMISGFLK---HGRLEEATRLFEQMPRRNVISYTAMLDG-----FMKKGEVDKARALSD 198
++ L+ R E RL M R + ++ L + K GE+D A+ + D
Sbjct: 183 EFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFD 242
Query: 199 YMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLEN 256
M ++ V+W MI+G+ +N +A++ F M +VT +I+ + ++G +
Sbjct: 243 CMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDL 302
Query: 257 ARLLFERIQ----PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
A L +++ D ++ +MI+G+ Q G AL L M ++ ++ T+ S +
Sbjct: 303 AIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAAS 362
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
AC+AL+ L+ G + H + ++ NV V N++I MY +CG + ++ F + ++ S
Sbjct: 363 ACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYS 422
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WN+II + Q G KA F +M + P+ IT+ +++ +G ++++DLF+ +
Sbjct: 423 WNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIE 482
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
K ++ + L+ ++GQ +KA QI + M F
Sbjct: 483 KDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQF 519
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 152/320 (47%), Gaps = 58/320 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM-- 107
V V N+ I + G + AA+ +FD M+ +DV +WN+II GY+Q GF ++ LF M
Sbjct: 389 VLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQE 448
Query: 108 --PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLE 160
NI++WN MI G + + D A D F+++ +RN A++N++ISGF++ G+ +
Sbjct: 449 SDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKD 508
Query: 161 EATRLFEQMP-----------------------------------RRNVISYTA----ML 181
+A ++F M RR ++S + ++
Sbjct: 509 KALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLI 568
Query: 182 DGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVF 239
D + K G + ++ + + +S+K+ VSW M++ YV + A +LFY+M N
Sbjct: 569 DSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRG 628
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCV-----SFNAMIAGYAQNGVAEEALRLFSG 294
+++ + GM++ + +F I V ++AM+ ++G EAL
Sbjct: 629 TFASILLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQS 688
Query: 295 MIKMDMQPDDATLVSVFTAC 314
M ++P+ + ++ TAC
Sbjct: 689 ---MPIEPNSSVWGALLTAC 705
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 123/231 (53%), Gaps = 1/231 (0%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N FV T +++ + K G+L AR +F + ++ +++AMI G ++N E + LF M+
Sbjct: 116 NPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMM 175
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ + PD+ L V AC + L GR H +VIR G + + N+++ +Y++CG +
Sbjct: 176 RDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMD 235
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
++ F + + V+WN +I+ F Q+G +A +F M +G +P +T+ L+S
Sbjct: 236 CAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYN 295
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
G + ++DL M + +GI P +T ++ ++ G++ A + + M
Sbjct: 296 QLGHCDLAIDLMRKM-EWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEM 345
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISAL-----SRAGKISAAR 70
+ P + ILS C N I F+ + + V+ +S L +++G + ++
Sbjct: 522 ILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSK 581
Query: 71 QLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI----DND 126
+F++++ KD ++WN++++ Y +G + + +LF M + + A +
Sbjct: 582 NIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAG 641
Query: 127 RIDDAFDYFQAMPE-----RNTATYNAMISGFLKHGRLEEATRLFEQMP 170
+D+ F + + + Y+AM+ + G+L EA + MP
Sbjct: 642 MVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMP 690
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 186/623 (29%), Positives = 298/623 (47%), Gaps = 118/623 (18%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--------------PVKN 111
++AAR+LFD++ D +WN+++ + G + L ++M +++
Sbjct: 51 LAAARRLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERGLAANTFALGSALRS 110
Query: 112 IVSWNC-----------MIAGCIDN--------------DRIDDAFDYFQAMPERNTATY 146
+ C + AG DN R DA F MPERNT ++
Sbjct: 111 AAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSW 170
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRN--------------------------------- 173
NA+++G+++ G++ A +LF +M R
Sbjct: 171 NALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVNDSTCFLMHQLHGKIVKY 230
Query: 174 -----VISYTAMLDGFMKKGEVDKARALSDYMSFK-NVVSWTVMITGYVKNERFCEAREL 227
+I A + + + G + +R + D + + +++SW M+ Y + EA
Sbjct: 231 GSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRF 290
Query: 228 FYRM-------PDY-------------------------DKNVF--------VVTAMITG 247
F M PD KN F + AM T
Sbjct: 291 FASMMRASGVQPDMYSFTSIISACAEHRDHGGTVIHGLVSKNGFEGVTHVCNALIAMYTR 350
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
F + M+E+A F+ + KD VS+N+M+ GY+Q+G++ +ALR F M ++ D+
Sbjct: 351 FSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAF 410
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
+ +CS L LL GRQ H LVIR+GF +N V +++I MYS+ G + D+ +F +
Sbjct: 411 SAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADK 470
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+ V WN+++ +AQHG + F+QM D ITF+ L++AC HAG V+E ++
Sbjct: 471 SSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEI 530
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
M YGI EHY C +D+ RAGQL+KA ++ MPFE D VW +LL AC ++
Sbjct: 531 LNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHG 590
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
N+EL A + E +P+ + YV+LSN+Y+ GMW D V+ MK +G++K +SWI
Sbjct: 591 NMELASDVASHLLEAEPRQHSTYVLLSNMYSGLGMWSDRAIVQKEMKNKGLSKVPGWSWI 650
Query: 548 EIGNKVHYFLGGDMSHPCIDKIH 570
E+ N+VH F D SHP +D+I+
Sbjct: 651 EVKNEVHSFNAEDGSHPRMDEIY 673
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 278/527 (52%), Gaps = 56/527 (10%)
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PE--------RNTATYNAMISG 152
MP +N+VSW MI+G N + +A F M P R A+ ++ G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 153 -------------------------FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
+ K G + +A ++FE+MP ++ +S+TAM+DG+ K
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 188 GEVDKARALSDYMSFKNVVSWTVMI-----------TGYVKNERFCEARELFYRMPDYDK 236
GE ++A ++FK ++ V I G +K +F + ++
Sbjct: 121 GEFEEA-----LLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 175
Query: 237 NVFVVTAMITGFCKVGMLENARLLFE-RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
++FV A+ + K G +E+A +F + ++ VS+ +I GY + E+ L +F +
Sbjct: 176 DIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVEL 235
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ ++P++ T S+ AC+ L +G Q H V++ F+ + V + ++ MY +CG +
Sbjct: 236 RRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLL 295
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ AF +I P ++WN++++ F QHG + A+ F +M G P+ ITF+SLL+ C
Sbjct: 296 EQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGC 355
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
HAG V E +D F M K YG++P EHY+C++D+L RAG+L++A + MPFE +
Sbjct: 356 SHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFG 415
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
W S L AC I+ + E+G+LAA+K+ +L+P+NS V+LSN+YA W DV VR+ M++
Sbjct: 416 WCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRD 475
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
V K YSW+++G K H F D SHP I+ +L Q+K+
Sbjct: 476 GNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKA 522
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 171/395 (43%), Gaps = 58/395 (14%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQL----FDQMTTKDVITWNAIITGYWQNGFLQESKN 102
TQ+ F ++ I A + G I +Q+ ++ + + Y + G + ++
Sbjct: 40 TQFAF--SSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACK 97
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----------------------- 139
+F+ MP K+ VSW MI G ++A F+ M
Sbjct: 98 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 157
Query: 140 ----------------ERNTATYNAMISGFLKHGRLEEATRLFE-QMPRRNVISYTAMLD 182
E + NA+ + K G +E A+ +F RNV+SYT ++D
Sbjct: 158 CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLID 217
Query: 183 GFMKKGEVDKARALSDYMSFK------NVVSWTVMITGYVKNERFCEARELFYRM--PDY 234
G+++ +++K LS ++ + N +++ +I + +L ++ ++
Sbjct: 218 GYVETEQIEK--GLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINF 275
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D++ FV + ++ + K G+LE A F+ I +++N++++ + Q+G+ ++A+++F
Sbjct: 276 DEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFER 335
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCG 353
M+ ++P+ T +S+ T CS L+ EG + + G + VI + R G
Sbjct: 336 MVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAG 395
Query: 354 GILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ ++ E R PN W + + A HG E
Sbjct: 396 RLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 430
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV++ + + G + A Q FD++ I WN++++ + Q+G +++ +F+ M +
Sbjct: 280 FVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDR 339
Query: 111 ----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEE 161
N +++ ++ GC +++ DYF +M + Y+ +I + GRL+E
Sbjct: 340 GVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKE 399
Query: 162 ATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSD---YMSFKNVVSWTVMITGYVK 217
A +MP N + + L G+ + + ++ + KN + ++ Y
Sbjct: 400 AKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYAN 459
Query: 218 NERFCEARELFYRMPD 233
++ + R + RM D
Sbjct: 460 ERQWEDVRSVRMRMRD 475
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 129/306 (42%), Gaps = 64/306 (20%)
Query: 23 ILSTPDSCGNF-------TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFD- 74
+ ST +CG + HSS +++L +FV NA S+AG + +A +F
Sbjct: 145 LCSTLGACGALKACKFGRSVHSS--VVKLGFESDIFVGNALTDMYSKAGDMESASNVFGI 202
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGC-------- 122
++V+++ +I GY + +++ ++F + + I +++ +I C
Sbjct: 203 DSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQ 262
Query: 123 ------------IDNDR---------------IDDAFDYFQAMPERNTATYNAMISGFLK 155
D D ++ A F + + +N+++S F +
Sbjct: 263 GTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQ 322
Query: 156 HGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARAL-----SDYMSFKNVV 206
HG ++A ++FE+M R N I++ ++L G G V++ Y
Sbjct: 323 HGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEE 382
Query: 207 SWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV-GMLENARLLFE--- 262
++ +I + R EA+E RMP ++ N F + + G C++ G E +L E
Sbjct: 383 HYSCVIDLLGRAGRLKEAKEFINRMP-FEPNAFGWCSFL-GACRIHGDKEMGKLAAEKLV 440
Query: 263 RIQPKD 268
+++PK+
Sbjct: 441 KLEPKN 446
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 161/459 (35%), Positives = 252/459 (54%), Gaps = 46/459 (10%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
A++ + K+G +E A +F++MP ++ I ++ G+ K G+VDKAR L D M +
Sbjct: 158 TALVDFYAKNGDMESAVSVFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSA 217
Query: 207 SWTVMITGYVKNERFCEARELFYRM----------------------PDYD--------- 235
SW MI Y F EA LF RM D D
Sbjct: 218 SWNSMIACYAHGGEFREALTLFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLI 277
Query: 236 -----KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+NV V TA++ + K +++AR F+R+ +D V+++ MIAGYAQNG E+L
Sbjct: 278 GEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLE 337
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE-----ANVSVCNAV 345
LF M D +P++ TLV V +AC+ L G V I N E + +A+
Sbjct: 338 LFERMKATDCRPNEVTLVGVISACAQL-----GSDELVEQIGNYAENQRLPLTSYLGSAL 392
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I MY+RCG + + F ++ +++WN++I A +G E A+ + +M NG P+
Sbjct: 393 IDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNE 452
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
ITF++LL+AC HAG V++ M FE M + + + P EH C+VD+L ++G L +A++
Sbjct: 453 ITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFIC 512
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
M E + +W +LL++C + +VEL +LA++K+ ++P NS++YV+LSN+YA AG+W D
Sbjct: 513 DMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGD 572
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
+R LM+ + V K AYSWI++ +VH FL D HP
Sbjct: 573 AREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHP 611
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 204/435 (46%), Gaps = 61/435 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A + ++ G + +A +FD+M KD I N +ITGY + G + +++ LF M
Sbjct: 154 VFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMER 213
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISGFLKHGRLEEATR- 164
+ SWN MIA +A F M N T ++ S K G L+ R
Sbjct: 214 RTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRV 273
Query: 165 --LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
L + +NVI +TA+++ ++K +D AR D MS ++VV+W+ MI GY +N R
Sbjct: 274 RDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPL 333
Query: 223 EARELFYRMP-------------------------------DYDKN------VFVVTAMI 245
E+ ELF RM +Y +N ++ +A+I
Sbjct: 334 ESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALI 393
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ + G + AR +F R++ K +++N+MI G A NG AE+A+ L+ M + +QP++
Sbjct: 394 DMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEI 453
Query: 306 TLVSVFTACSALQLLNEG-------RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
T V++ AC+ L+++G ++ H++ V C ++ + + GG+ ++
Sbjct: 454 TFVALLAACTHAGLVDQGMAFFEEMKREHLV------SPQVEHCACIVDLLCKSGGLWEA 507
Query: 359 ELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC-G 416
+ PN V W T++++ H E L + L +PD + LLS
Sbjct: 508 YKFICDMEVEPNAVIWTTLLSSCRAHADVE--LAKLASRKLLAMEPDNSSIYVLLSNIYA 565
Query: 417 HAGKVNESMDLFELM 431
AG ++ ++ +LM
Sbjct: 566 DAGLWGDAREIRDLM 580
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q V V+ A + + I AR+ FD+M+ +DV+ W+ +I GY QNG ES LF+ M
Sbjct: 283 QNVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERM 342
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFE 167
+ + G I A + + I + ++ RL + L
Sbjct: 343 KATDCRPNEVTLVGVI------------SACAQLGSDELVEQIGNYAENQRLPLTSYLG- 389
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
+A++D + + G V +AR++ M K V++W MI G N +A L
Sbjct: 390 ----------SALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISL 439
Query: 228 FYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA-----MIAGYA 280
+ +M + N A++ G+++ FE ++ + VS ++
Sbjct: 440 YEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLC 499
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
++G EA + + M+++P+ ++ ++C A
Sbjct: 500 KSGGLWEAYKF---ICDMEVEPNAVIWTTLLSSCRA 532
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 37/209 (17%)
Query: 257 ARLLFE---RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
AR LF+ R P C +F ++ ++ + L+ FS M + + VF +
Sbjct: 72 ARNLFDAVPRPAPALCSTF---LSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKS 128
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI--------------------------- 346
C+ +GRQ H + G +V V A++
Sbjct: 129 CALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPI 188
Query: 347 ----TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
T YS+ G + + F + SWN++IA +A G + +AL F +M G
Sbjct: 189 NCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGAR 248
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELM 431
P+ IT S+ S C +G ++ + +L+
Sbjct: 249 PNAITITSVFSICAKSGDLDTGKRVRDLI 277
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 174/559 (31%), Positives = 296/559 (52%), Gaps = 15/559 (2%)
Query: 20 ILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTK 79
IL++L D+ G T C +L + FV ++ I A S G +S AR +FD + K
Sbjct: 156 ILKVLVAMDAPG-LTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWK 214
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVSWNCMIAGCIDNDRIDDAFD 133
D +TW A+++ Y +N +++ N F M P +++ A C+ + +
Sbjct: 215 DAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIH 274
Query: 134 --YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
+ + + A++ + K G +E+A +FE +P +VI ++ ++ + + + +
Sbjct: 275 GCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNE 334
Query: 192 KARALSDYMSFKNVVSWTVMITGYVK---NERFCEARELFYRMP---DYDKNVFVVTAMI 245
+A + M +VV ++G ++ N F + + + + Y+ +FV A++
Sbjct: 335 QAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALM 394
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K +EN+ +F ++ + VS+N +I GY Q+G AE+AL +F M +
Sbjct: 395 DVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQV 454
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
T SV AC+ + Q H L+ ++ F + VCN++I Y++CG I D+ F I
Sbjct: 455 TFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESI 514
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
++VSWN II+ +A HG AL F++M + P+ +TF++LLS CG G VN+ +
Sbjct: 515 IQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGL 574
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
LF M + I PS +HYTC+V +L RAG+L A + +P VW +LL++CV+
Sbjct: 575 SLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVV 634
Query: 486 NLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYS 545
+ NV LG+ +A+K+ E++PQ+ YV+LSN+YAAAG+ V +R M+ GV K+ S
Sbjct: 635 HKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLS 694
Query: 546 WIEIGNKVHYFLGGDMSHP 564
W+EI +VH F G HP
Sbjct: 695 WVEIKGEVHAFSVGSADHP 713
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 235/511 (45%), Gaps = 53/511 (10%)
Query: 61 SRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
+RAG+ AR + + D N ++ Y + G L ++ LF MP +N+VS+ ++
Sbjct: 63 ARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLV 122
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF--------EQMPR 171
G ++A F+ + + +++ LK +A L +
Sbjct: 123 QGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHD 182
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF--Y 229
RN ++++D + G V AR + D + +K+ V+WT M++ Y +N+ +A F
Sbjct: 183 RNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKM 242
Query: 230 RMPDYDKNVFVVT-----------------------------------AMITGFCKVGML 254
RM N FV+T A++ + K G +
Sbjct: 243 RMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYI 302
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E+AR +FE I D + ++ +I+ YAQ+ E+A +F M++ + P++ +L V AC
Sbjct: 303 EDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQAC 362
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ + L+ G+Q H LVI+ G+E+ + V NA++ +Y++C + +S FR + N VSWN
Sbjct: 363 ANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWN 422
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
TII + Q G E AL F +M +TF S+L AC + + ++ + L+ K
Sbjct: 423 TIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKS 482
Query: 435 YGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
+++ C L+D ++ G + A ++ + + + D W ++++ ++
Sbjct: 483 ---TFNNDTIVCNSLIDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISGYALHGRATDA 538
Query: 493 ELAAKKMRELDPQ-NSAVYVMLSNLYAAAGM 522
+M + D + N +V L ++ + G+
Sbjct: 539 LELFNRMNKSDTKPNDVTFVALLSVCGSTGL 569
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 252/459 (54%), Gaps = 25/459 (5%)
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
N+ +N +I GC ++ +++F Y+ A ++ + H L +A E P
Sbjct: 81 NLFIYNALIRGCSTSENPENSFHYYI------KALRFGLLPDNITHPFLVKACAQLENAP 134
Query: 171 RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYR 230
A+ GF + V + ++ Y AR +F R
Sbjct: 135 MGMQTHGQAIKHGFEQDFYVQNS-----------------LVHMYASVGDINAARSVFQR 177
Query: 231 MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
M +D V T MI G+ + G ++AR LF+R+ ++ V+++ MI+GYA+N E+A+
Sbjct: 178 MCRFD--VVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVE 235
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
F + + ++ +V V ++C+ L L G ++H V+RN N+ + AV+ MY+
Sbjct: 236 TFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYA 295
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
RCG + + + F Q+ +++ W +IA A HG+ EKAL +FS+M GF P ITF +
Sbjct: 296 RCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTA 355
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+L+AC HAG V +++FE M + +G+ P EHY C+VD+L RAG+L KA + MP +
Sbjct: 356 VLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVK 415
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
+ +W +LL AC I+ NVE+GE K + E+ P+ S YV+LSN+YA A W+DVT +R
Sbjct: 416 PNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMR 475
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
+MK++GV K YS IEI KVH F GD +HP I+KI
Sbjct: 476 QMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKI 514
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q +V N+ + + G I+AAR +F +M DV++W +I GY + G + ++ LF M
Sbjct: 150 QDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRM 209
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH----GRLEEAT 163
P +N+V+W+ MI+G N+ + A + F+A+ ++ G + G L
Sbjct: 210 PERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGE 269
Query: 164 RLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
+ E + R N+I TA++D + + G V+KA + + + K+V+ WT +I G +
Sbjct: 270 KAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHG 329
Query: 220 RFCEARELFYRMPDYDKNVFV-----VTAMITGFCKVGMLENARLLFERIQPKDCVS--- 271
A + + + K FV TA++T GM+E +FE ++ V
Sbjct: 330 Y---AEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRL 386
Query: 272 --FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ M+ + G +A + ++KM ++P+ ++ AC
Sbjct: 387 EHYGCMVDLLGRAGKLRKAEKF---VLKMPVKPNAPIWRALLGAC 428
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 141/332 (42%), Gaps = 60/332 (18%)
Query: 237 NVFVVTAMITGFC---KVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+VF + +I FC +L A + +IQ + +NA+I G + + E + +
Sbjct: 48 DVFAASRLI-AFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYI 106
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
++ + PD+ T + AC+ L+ G Q+H I++GFE + V N+++ MY+ G
Sbjct: 107 KALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVG 166
Query: 354 GILDSELAFRQIHSPNLVSWNTIIA-------------------------------AFAQ 382
I + F+++ ++VSW +IA +A+
Sbjct: 167 DINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYAR 226
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK-------VY 435
+ +EKA+ F + G + + ++S+C H G + E +++ +
Sbjct: 227 NNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLIL 286
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE----- 490
G T +VD+ +R G +EKA + + +P E D W +L+A ++ E
Sbjct: 287 G--------TAVVDMYARCGNVEKAVMVFEQLP-EKDVLCWTALIAGLAMHGYAEKALWY 337
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
E+A K D +AV S+ AGM
Sbjct: 338 FSEMAKKGFVPRDITFTAVLTACSH----AGM 365
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 294/546 (53%), Gaps = 14/546 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV +A + + G+I + ++FD+M T++ +TW A+ITG + G+ + F M
Sbjct: 151 VFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGR 210
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEE 161
+ + A + A ++ +++ + N+ N++ + + K G+L+
Sbjct: 211 SKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDY 270
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGYVK 217
F +M +V+S+T ++ +++ G+ D M NV+ +++ +I+
Sbjct: 271 GLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCAN 330
Query: 218 NERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
R +L + + + V +++T + K G L + +F ++ +D ++++ +
Sbjct: 331 FARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTI 390
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IA Y+Q G EEA S M +P++ L SV + C ++ +L +G+Q H V+ G
Sbjct: 391 IAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGL 450
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E VC+A+I MY++CG I ++ F +++SW +I+ +A+HGH ++A+ F
Sbjct: 451 EQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFEN 510
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
+ G PD +TF+ +L+AC HAG V+ F M K Y I PS EHY C++D+L RAG
Sbjct: 511 IQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAG 570
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L A + + MP + D VW +LL AC I+ +V+ G+ AA ++ +LDP + ++ L+N
Sbjct: 571 RLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLAN 630
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
++AA G W++ +R+LMK +GV K+ +S +++ + V F+ GD SHP + I+ L+
Sbjct: 631 IFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEE 690
Query: 576 ASVQMK 581
+ M+
Sbjct: 691 LASGME 696
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 208/428 (48%), Gaps = 22/428 (5%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN-- 111
N ++ L + + AR LFDQ+ +D ++W II+GY + E+ LF M +++
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 112 -----IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEATR 164
++S G N F + + +A++ ++K G + + +
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDK--------ARALSDYMSFKNVVSWTVMI-TGY 215
+F++MP RN +++TA++ G ++ G + R+ +Y S+ ++ +G
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGA 232
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ + R + L +D+N FV ++ T + K G L+ F +++ D VS+ +
Sbjct: 233 LNHGRSIHTQTL---KKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTI 289
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
+ Y Q G + L+ F M ++ P++ T +V + C+ L G Q H V+ GF
Sbjct: 290 VTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGF 349
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+SV N+++T+YS+CG + F + ++++W+TIIAA++Q G+ E+A + S+
Sbjct: 350 VNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSR 409
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G P+ S+LS CG + + L ++ V G+ +S + L+ + ++ G
Sbjct: 410 MRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSV-GLEQTSMVCSALIIMYAKCG 468
Query: 456 QLEKAWQI 463
+ +A +I
Sbjct: 469 SIAEASKI 476
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 169/348 (48%), Gaps = 9/348 (2%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+ A N + +K L++A LF+Q+P+R+ +S+T ++ G++ + +A L M
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 202 FKN-------VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
++ ++S + G N + F +VFV +A++ + K+G +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEI 167
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ +F+ + ++ V++ A+I G + G +E L FSGM + ++ D A
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ LN GR H ++ GF+ N V N++ TMY++CG + FR++ + ++VSW
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWT 287
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
TI+ A+ Q G + L F +M + P+ TF +++S C + ++ L ++ V
Sbjct: 288 TIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCV 347
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G + + ++ + S+ G+L ++ M F D W +++AA
Sbjct: 348 -GFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAA 393
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q V +A I ++ G I+ A ++F D+I+W A+I+GY ++G QE+ LF+++
Sbjct: 452 QTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENI 511
Query: 108 PVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGR 158
+ V++ ++ C +D F YF +M + T Y MI + GR
Sbjct: 512 QKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGR 571
Query: 159 LEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVD 191
L +A L MP + + + ++ +L G+VD
Sbjct: 572 LHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVD 605
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 293/553 (52%), Gaps = 31/553 (5%)
Query: 57 ISALSRAGKISAARQLFDQMT--TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV- 113
I+ S+ I + ++F+ T K+V +NA+I G+ N Q + L+ M I
Sbjct: 71 INMYSKCSLIDHSLRVFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAP 130
Query: 114 ---SWNCMIAGCIDNDRIDDAFDY-------FQAMPERNTATYNAMISGFLKHGRLEEAT 163
++ C+I C D+D D F F+ E + +A+++ +LK + EA
Sbjct: 131 DKFTFPCVIRACGDDD---DGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAY 187
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK----NE 219
R+FE++P R+V+ + AM++GF + G ++A + M VV +TG +
Sbjct: 188 RVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMG 247
Query: 220 RFCEAREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
F R + F Y+ V V A+I + K + +A +FE + D S+N++++
Sbjct: 248 DFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMS 307
Query: 278 GYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+ + G LRLF M+ +QPD T+ +V AC+ L L GR+ H ++ NG
Sbjct: 308 VHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLA 367
Query: 337 A--------NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEK 388
+V + NA++ MY++CG + D+ + F + ++ SWN +I + HG+ +
Sbjct: 368 KEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGE 427
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL FS+M P+ I+F+ LLSAC HAG V E + M YG+ PS EHYTC++
Sbjct: 428 ALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVI 487
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSA 508
D+L RAGQL +A+ + MPF+AD W SLLAAC ++ + +L E+AA K+ EL+P +
Sbjct: 488 DMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCG 547
Query: 509 VYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDK 568
YV++SN+Y G + +V R MK+Q V K+ SWIE+ N VH F+ GD +HP +
Sbjct: 548 NYVLMSNVYGVVGRYEEVLEWRYTMKQQNVKKRPGCSWIELVNGVHVFITGDRTHPQTEY 607
Query: 569 IHLELKRASVQMK 581
I+ L + ++
Sbjct: 608 IYAGLNSLTAVLQ 620
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 195/454 (42%), Gaps = 47/454 (10%)
Query: 14 RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLF 73
+ FP ++R D G + ++ VFV +A ++ + + A ++F
Sbjct: 132 KFTFPCVIRACGDDDD-GFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVF 190
Query: 74 DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFD 133
+++ +DV+ WNA++ G+ Q G +E+ +F+ M +V + G + + FD
Sbjct: 191 EELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFD 250
Query: 134 YFQAMP--------ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
+A+ E NA+I + K + +A +FE M ++ S+ +++
Sbjct: 251 NGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHE 310
Query: 186 KKGEVDKARALSDYMSFK-----NVVSWTVMITGYVKNERFCEARELFYRM--------- 231
+ G+ L D M ++V+ T ++ RE+ M
Sbjct: 311 RCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEE 370
Query: 232 -PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
D +V + A++ + K G + +AR++F ++ KD S+N MI GY +G EAL
Sbjct: 371 SHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALD 430
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ-SHVLVIRNGFEANVSVCNAVITMY 349
+FS M + M P++ + V + +ACS ++ EG + + G ++ VI M
Sbjct: 431 IFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDML 490
Query: 350 SRCGGILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
R G ++++ +L + V W +++AA H + A + S+ + +PD
Sbjct: 491 CRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLHNDTDLAEVAASK--VIELEPD---- 544
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
CG+ + LM VYG++ E
Sbjct: 545 -----HCGN----------YVLMSNVYGVVGRYE 563
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA- 361
D T ++ +C+ L++G++ H +++N F + ++I MYS+C ++D L
Sbjct: 28 DLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKC-SLIDHSLRV 86
Query: 362 --FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F H+ N+ ++N +IA F + ++AL ++QM G PD TF ++ ACG
Sbjct: 87 FNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDD 146
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+ LM KV G+ + LV+ + + +A+++ + +P D +W ++
Sbjct: 147 DGFVVTKIHGLMFKV-GLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVR-DVVLWNAM 204
Query: 480 L 480
+
Sbjct: 205 V 205
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 165/559 (29%), Positives = 296/559 (52%), Gaps = 18/559 (3%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++RL V + N+ I SR GK+ ++R++F+ M +++ +WN+I++ Y + G++ ++
Sbjct: 652 VLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDA 711
Query: 101 KNLFQSMPV----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISG 152
L M +IV+WN +++G DA + + + NT++ ++++
Sbjct: 712 MGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQA 771
Query: 153 FLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
+ G ++ + + R +V T ++D ++K G + AR + D M KN+V+W
Sbjct: 772 VYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAW 831
Query: 209 TVMITGYVKNERFCEARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
+I+G EA L RM N ++++G+ G E A + +++
Sbjct: 832 NSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKK 891
Query: 267 K----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
+ VS+ A+++G ++NG L++F M + + P+ AT+ S+ L LL
Sbjct: 892 NGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYS 951
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G++ H ++N + V A++ MY++ G + + F I + L SWN +I +A
Sbjct: 952 GKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAM 1011
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
E+ + F+ M G +PD ITF S+LS C ++G V E F+LM YG+IP+ E
Sbjct: 1012 FRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIE 1071
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
H +C+V++L R+G L++AW + MP + D +WG+ L++C I+ ++EL E+A K+++ L
Sbjct: 1072 HCSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVL 1131
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P NSA Y+M+ NLY+ W DV R+R M V Q +SWI+I VH F +
Sbjct: 1132 EPHNSANYMMMINLYSNLNRWGDVERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKA 1191
Query: 563 HPCIDKIHLELKRASVQMK 581
HP +I+ EL + +MK
Sbjct: 1192 HPDEGEIYFELYKLVSEMK 1210
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 211/419 (50%), Gaps = 36/419 (8%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE---VDKARALSDYMSFKNV 205
+I+ +L+ G A+ +F RN +S+ F++K E V+K + L +++ +N
Sbjct: 463 LITRYLEFGEFGYASAVFFLGFPRNQVSWR----DFLEKAEDFGVEKYKVLEEFVRLQNK 518
Query: 206 -VSWTVMITGYVKNERFCEARELFYRMPDY------------DKNVFVVTAMITGFCKVG 252
V++ ++ V R C L YR + + + VV+A++ + +
Sbjct: 519 GVNFDEVVLAMVF--RICAV--LMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCV 574
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
L+ A +F+ + +D +++N ++ Q+G E+A++LF M + D+T+V +
Sbjct: 575 SLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQ 634
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
CS + +GRQ H V+R GFE+NVS+CN++I MYSR G + S F + NL S
Sbjct: 635 VCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSS 694
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM- 431
WN+I++++ + G+ + A+ +M G PD +T+ SLLS G+A K S D ++
Sbjct: 695 WNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLS--GYASKA-LSRDAIAVLK 751
Query: 432 -VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL-LAACVINLNV 489
+++ G+ P++ + L+ + G L K + G + +W + + +I++ +
Sbjct: 752 RIQIAGLKPNTSSISSLLQAVYEPG-LVKLGKAIHG--YVIRNQLWYDVYVETTLIDMYI 808
Query: 490 ELGELAAKKM--RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
+ G L +M +D +N + L + + G+ ++ + M+++G+ K A +W
Sbjct: 809 KTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGI-KSNAVTW 866
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 173/379 (45%), Gaps = 46/379 (12%)
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+ + +T +A++ + + L+ A ++F++MP+R+ +++ ++ ++ G +KA
Sbjct: 553 RGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVK 612
Query: 196 LSDYMSF---------------------------------------KNVVSWTVMITGYV 216
L M F NV +I Y
Sbjct: 613 LFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYS 672
Query: 217 KNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ----PKDCVSF 272
+N + +R++F M D+N+ ++++ + ++G +++A L + ++ D V++
Sbjct: 673 RNGKLESSRKVFNSM--VDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTW 730
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N++++GYA ++ +A+ + + ++P+ +++ S+ A L+ G+ H VIR
Sbjct: 731 NSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIR 790
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
N +V V +I MY + G + + + F + N+V+WN++I+ + G ++A
Sbjct: 791 NQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEAL 850
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
S+M G + +T+ SL+S GK +++ + M K G+ P+ +T ++ S
Sbjct: 851 ISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKM-KKNGVEPNVVSWTAILSGCS 909
Query: 453 RAGQLEKAWQITQGMPFEA 471
+ G +I M E
Sbjct: 910 KNGNFGNGLKIFLKMQEEG 928
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 291/551 (52%), Gaps = 19/551 (3%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN-- 111
NA + ++ G++ +A ++F Q+ KD I+WN++++ Y QN F E+ + F M
Sbjct: 305 NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQ 364
Query: 112 -----IVSWNCMIAGC--IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATR 164
+VS + + ++N R A+ Q + + N ++ ++K G +E + +
Sbjct: 365 PDHACVVSLSSALGHLSRLNNGREFHAYAIKQRL-HTDLQVGNTLMDMYIKCGSIECSAK 423
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+FE M R+ IS+T +L F + +A + + + ++ ++MI + E C
Sbjct: 424 VFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSIL--ETCCGL 481
Query: 225 REL-------FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
+ + Y + + ++ + +I + + G +++ LF+R++ KD VS+ +MI
Sbjct: 482 KSISLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMIN 541
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
NG A+ LF+ M K ++QPD LVS+ A + L L +G+Q H +IR F
Sbjct: 542 CCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPI 601
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG 397
V ++++ MYS CG + + F + ++V W +I A HGH ++A+ F +M
Sbjct: 602 EGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRML 661
Query: 398 LNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQL 457
G PD ++FL+LL AC H+ V E ++MV Y + P EHY C+VDIL R+GQ
Sbjct: 662 QTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQT 721
Query: 458 EKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLY 517
E+A++ + MP + + VW +LL AC ++ N L +AA K+ EL+P N Y+++SN++
Sbjct: 722 EEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVF 781
Query: 518 AAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRAS 577
A G W + R M E+G+ K A SWIEIGN +H F GD H + IHL+L +
Sbjct: 782 AEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEIT 841
Query: 578 VQMKSVDDFVE 588
++ +VE
Sbjct: 842 EMLRREGGYVE 852
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 171/357 (47%), Gaps = 27/357 (7%)
Query: 127 RIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
R+DDA F MP R ++NA++ +L G EA R++ M R + + DG
Sbjct: 110 RVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAM--RASAAPGSAPDGCTL 167
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
+ A D V V + DK+ V A+I
Sbjct: 168 ASVLKACGAEGDGRCGGEVHGLAVKV--------------------GLDKSTLVANALIG 207
Query: 247 GFCKVGMLENARLLFERIQ--PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDD 304
+ K G+L++A +FE +Q +D S+N++++G QNG EAL LF GM +
Sbjct: 208 MYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNS 267
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
T V+V C+ L LL+ GR+ H +++ G E N+ CNA++ MY++ G + + F Q
Sbjct: 268 YTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQ-CNALLVMYAKYGRVDSALRVFGQ 326
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
I + +SWN++++ + Q+ Y +A+ FF +M +GF PD +SL SA GH ++N
Sbjct: 327 IAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNG 386
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ +K + + L+D+ + G +E + ++ + M D W ++LA
Sbjct: 387 REFHAYAIKQR-LHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIR-DHISWTTILA 441
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 213/488 (43%), Gaps = 67/488 (13%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----------- 139
Y + G + +++ LF MP + + SWN ++ + + +A + AM
Sbjct: 105 YGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDG 164
Query: 140 -------------------------------ERNTATYNAMISGFLKHGRLEEATRLFE- 167
+++T NA+I + K G L+ A R+FE
Sbjct: 165 CTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEW 224
Query: 168 -QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY--VKNERFCE- 223
Q R+V S+ +++ G ++ G +A AL F+ + S + Y V + C
Sbjct: 225 LQQDARDVASWNSVVSGCVQNGRTLEALAL-----FRGMQSAGFPMNSYTSVAVLQVCAE 279
Query: 224 ------ARELFYRMPDYDKNVFV-VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
REL + + + A++ + K G +++A +F +I KD +S+N+M+
Sbjct: 280 LGLLSLGRELHAALLKCGSELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSML 339
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
+ Y QN EA+ F M++ QPD A +VS+ +A L LN GR+ H I+
Sbjct: 340 SCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLH 399
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
++ V N ++ MY +CG I S F + + +SW TI+A FAQ + +AL ++
Sbjct: 400 TDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILEL 459
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVN--ESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
G D + S+L C ++ + + + + + +I + L+DI
Sbjct: 460 QKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILENR----LIDIYGEC 515
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
G+ + + + Q + + D W S++ C N + +M++ + Q +V ++S
Sbjct: 516 GEFDHSLNLFQRVE-KKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSV-ALVS 573
Query: 515 NLYAAAGM 522
L A AG+
Sbjct: 574 ILVAIAGL 581
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 200/456 (43%), Gaps = 61/456 (13%)
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQ--SMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
K + NA+I Y + G L + +F+ +++ SWN +++GC+ N R +A F+
Sbjct: 197 KSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFR 256
Query: 137 AMPER----NTATYNAMIS-----GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
M N+ T A++ G L GR E L + N I A+L + K
Sbjct: 257 GMQSAGFPMNSYTSVAVLQVCAELGLLSLGR-ELHAALLKCGSELN-IQCNALLVMYAKY 314
Query: 188 GEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PDY------- 234
G VD A + ++ K+ +SW M++ YV+N + EA + F M PD+
Sbjct: 315 GRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLS 374
Query: 235 ------------------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
++ V ++ + K G +E + +FE + +D +
Sbjct: 375 SALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHI 434
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+ ++A +AQ+ EAL + + K + D + S+ C L+ ++ +Q H
Sbjct: 435 SWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYA 494
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
IRNG ++ + N +I +Y CG S F+++ ++VSW ++I +G A+
Sbjct: 495 IRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAV 553
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK----VYGIIPSSEHYTC 446
F++M PD + +S+L A + + + +++ + G + SS
Sbjct: 554 FLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSS----- 608
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
LVD+ S G + A ++ + + D +W +++ A
Sbjct: 609 LVDMYSGCGSMNYAIRVFERAKCK-DVVLWTAMINA 643
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 132/260 (50%), Gaps = 14/260 (5%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D + F+ T ++ + + G +++AR LF + + S+NA++ Y +G A EA+R++
Sbjct: 92 DDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGA 151
Query: 295 M---IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
M PD TL SV AC A G + H L ++ G + + V NA+I MY++
Sbjct: 152 MRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAK 211
Query: 352 CGGILDSEL---AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITF 408
C G+LDS L + Q + ++ SWN++++ Q+G +AL F M GF + T
Sbjct: 212 C-GLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTS 270
Query: 409 LSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQG 466
+++L C G ++ +L ++K S + C L+ + ++ G+++ A ++ G
Sbjct: 271 VAVLQVCAELGLLSLGRELHAALLKC----GSELNIQCNALLVMYAKYGRVDSALRVF-G 325
Query: 467 MPFEADTGVWGSLLAACVIN 486
E D W S+L+ V N
Sbjct: 326 QIAEKDYISWNSMLSCYVQN 345
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 14/155 (9%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ + N I G+ + LF ++ KD+++W ++I NG L + LF M
Sbjct: 502 LILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQK 561
Query: 110 KNI-------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH----GR 158
NI VS IAG + + + RN ++S + G
Sbjct: 562 ANIQPDSVALVSILVAIAGLSSLTKGKQVHGF---LIRRNFPIEGPVVSSLVDMYSGCGS 618
Query: 159 LEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
+ A R+FE+ ++V+ +TAM++ G +A
Sbjct: 619 MNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQA 653
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 294/546 (53%), Gaps = 14/546 (2%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV +A + + G+I + ++FD+M T++ +TW A+ITG + G+ + F M
Sbjct: 151 VFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGR 210
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEE 161
+ + A + A ++ +++ + N+ N++ + + K G+L+
Sbjct: 211 SKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDY 270
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV----SWTVMITGYVK 217
F +M +V+S+T ++ +++ G+ D M NV+ +++ +I+
Sbjct: 271 GLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCAN 330
Query: 218 NERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
R +L + + + V +++T + K G L + +F ++ +D ++++ +
Sbjct: 331 FARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTI 390
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
IA Y+Q G EEA S M +P++ L SV + C ++ +L +G+Q H V+ G
Sbjct: 391 IAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGL 450
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
E VC+A+I MY++CG I ++ F +++SW +I+ +A+HGH ++A+ F
Sbjct: 451 EQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFEN 510
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
+ G PD +TF+ +L+AC HAG V+ F M K Y I PS EHY C++D+L RAG
Sbjct: 511 IQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAG 570
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L A + + MP + D VW +LL AC I+ +V+ G+ AA ++ +LDP + ++ L+N
Sbjct: 571 RLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLAN 630
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKR 575
++AA G W++ +R+LMK +GV K+ +S +++ + V F+ GD SHP + I+ L+
Sbjct: 631 IFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEE 690
Query: 576 ASVQMK 581
+ M+
Sbjct: 691 LASGME 696
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 208/428 (48%), Gaps = 22/428 (5%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN-- 111
N ++ L + + AR LFDQ+ +D ++W II+GY + E+ LF M +++
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 112 -----IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEATR 164
++S G N F + + +A++ ++K G + + +
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 165 LFEQMPRRNVISYTAMLDGFMKKGEVDK--------ARALSDYMSFKNVVSWTVMI-TGY 215
+F++MP RN +++TA++ G ++ G + R+ +Y S+ ++ +G
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGA 232
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ + R + L +D+N FV ++ T + K G L+ F +++ D VS+ +
Sbjct: 233 LNHGRSIHTQTL---KKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTI 289
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
+ Y Q G + L+ F M ++ P++ T +V + C+ L G Q H V+ GF
Sbjct: 290 VTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGF 349
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+SV N+++T+YS+CG + F + ++++W+TIIAA++Q G+ E+A + S+
Sbjct: 350 VNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSR 409
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M G P+ S+LS CG + + L ++ V G+ +S + L+ + ++ G
Sbjct: 410 MRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSV-GLEQTSMVCSALIIMYAKCG 468
Query: 456 QLEKAWQI 463
+ +A +I
Sbjct: 469 SIAEASKI 476
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 169/348 (48%), Gaps = 9/348 (2%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+ A N + +K L++A LF+Q+P+R+ +S+T ++ G++ + +A L M
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 202 FKN-------VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
++ ++S + G N + F +VFV +A++ + K+G +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEI 167
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ +F+ + ++ V++ A+I G + G +E L FSGM + ++ D A
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ LN GR H ++ GF+ N V N++ TMY++CG + FR++ + ++VSW
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWT 287
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
TI+ A+ Q G + L F +M + P+ TF +++S C + ++ L ++ V
Sbjct: 288 TIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCV 347
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G + + ++ + S+ G+L ++ M F D W +++AA
Sbjct: 348 -GFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAA 393
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q V +A I ++ G I+ A ++F D+I+W A+I+GY ++G QE+ LF+++
Sbjct: 452 QTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENI 511
Query: 108 PVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGR 158
+ V++ ++ C +D F YF +M + T Y MI + GR
Sbjct: 512 QKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGR 571
Query: 159 LEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVD 191
L +A L MP + + + ++ +L G+VD
Sbjct: 572 LHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVD 605
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 295/549 (53%), Gaps = 38/549 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV NA ++ + G + +AR +FDQM +DV++W ++ Y ++ E+ L + M
Sbjct: 123 VFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQF 182
Query: 110 KNI-------VSWNCMIAGCID--NDRIDDAFDYFQAMPER-NTATYNAMISGFLKHGRL 159
+ +S + +D + R + E+ + A+I + K G L
Sbjct: 183 VGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCL 242
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMSFKNVVSWTVMIT- 213
A RLF+++ +R+V+S+T M+ G ++ +D+ R L + + F N ++ +IT
Sbjct: 243 ASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKL-FPNEITLLSLITE 301
Query: 214 -GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSF 272
G+V + + + ++ +VTA+I + K G + AR LF ++ KD +
Sbjct: 302 CGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIW 361
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
+ +I+ YA ++ LF M+ D++P++ T+VS+ + C+ L+ G+ +H + R
Sbjct: 362 SVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINR 421
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
+G E +V + A+I MY++CG + + F + ++ WNT++A F+ HG ++AL
Sbjct: 422 HGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALEL 481
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
FS+M +G +P+ ITF+S+ AC H+G LM EHY CLVD+L
Sbjct: 482 FSEMESHGVEPNDITFVSIFHACSHSG----------LM----------EHYGCLVDLLG 521
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAG L++A I + MP +T +WG+LLAAC ++ N+ LGE+AA+K+ ELDPQN V+
Sbjct: 522 RAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVL 581
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
SN+YA+A W DVT VR M G+ K+ SWIE+ VH+F GD + K++
Sbjct: 582 KSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEM 641
Query: 573 LKRASVQMK 581
+ ++++
Sbjct: 642 VTEMCIKLR 650
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 190/420 (45%), Gaps = 56/420 (13%)
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY-NAMISGFLK------HGRLEEATRLF 166
++N +I+ +N +F+ + M + A N ++ LK G L F
Sbjct: 54 NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113
Query: 167 EQMP--RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
Q +V A+++ + K G + AR + D M ++VVSWT M+ YV+++ F EA
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173
Query: 225 RELFYRMP---------------------------------------DYDKNVFVVTAMI 245
L M D V + TA+I
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+CK G L +A+ LF+R+ + VS+ MIAG ++ +E + F+ M++ + P++
Sbjct: 234 DMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEI 293
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
TL+S+ T C + L+ G+ H ++RNGF ++++ A+I MY +CG + + F +
Sbjct: 294 TLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
++ W+ +I+A+A ++ F +M N P+ +T +SLLS C AG ++
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAG----AL 409
Query: 426 DL---FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
DL + +G+ T L+++ ++ G + A + + D +W +++A
Sbjct: 410 DLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFN-EAMQRDIRMWNTMMAG 468
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 151/313 (48%), Gaps = 27/313 (8%)
Query: 224 AREL--FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
REL F + + +VFV A++ + K G L +ARL+F+++ +D VS+ M+ Y +
Sbjct: 107 GRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVR 166
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEA-NV 339
+ EALRL M + ++ L+S+ L + GR H ++RN G E V
Sbjct: 167 SKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEV 226
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
S+ A+I MY + G + ++ F ++ ++VSW +IA + ++ F++M
Sbjct: 227 SMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEE 286
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDL---FELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
P+ IT LSL++ CG G ++DL F + G S T L+D+ + GQ
Sbjct: 287 KLFPNEITLLSLITECGFVG----TLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQ 342
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAA-----C---VINLNVELGELAAKKMRELDPQNSA 508
+ A + G+ + D +W L++A C V NL VE+ ++ P N
Sbjct: 343 VGYARALFNGVK-KKDVKIWSVLISAYAHVSCMDQVFNLFVEMLN------NDVKPNNVT 395
Query: 509 VYVMLSNLYAAAG 521
+ +LS L A AG
Sbjct: 396 MVSLLS-LCAEAG 407
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 110/233 (47%), Gaps = 3/233 (1%)
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP-DDATLVSVFTACSALQLLNEGRQSHVL 329
++N +I+ Y N + + + + M D D+ L S+ AC+ + GR+ H
Sbjct: 54 NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+NGF ++V VCNA++ MY +CG ++ + L F Q+ ++VSW T++ + + + +A
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP-SSEHYTCLV 448
L +M G G+ +SL++ G+ + + +V+ G T L+
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRE 501
D+ + G L A ++ + + W ++A C+ + ++ G +M E
Sbjct: 234 DMYCKGGCLASAQRLFDRLSKRSVVS-WTVMIAGCIRSCRLDEGAKNFNRMLE 285
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 181/647 (27%), Positives = 307/647 (47%), Gaps = 118/647 (18%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----P 108
N IS + G +S+AR LFD M + V+TW ++ Y N E+ LF+ M
Sbjct: 78 TNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCT 137
Query: 109 VKNIVSWNCMIAGCIDN-------------------------------------DRIDDA 131
+ + V++ ++ GC D R+D A
Sbjct: 138 LPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLA 197
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR-------------------- 171
F+ + ++++ T+N +I+G+ K G EA LF +M +
Sbjct: 198 CVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGL 257
Query: 172 -------------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
R+ +L + K V + R L + M + VS+ V+I
Sbjct: 258 HDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVI 317
Query: 213 TGYVKNERFCEARELFYRMP--DYDKNVF--------------------------VVTA- 243
+ Y + E++ E+ LF M +D+ F V TA
Sbjct: 318 SSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATAD 377
Query: 244 --------MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
++ + K M + A L+F+ + + VS+ A+I+GY Q G+ L+LF+ M
Sbjct: 378 SILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKM 437
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+++ D +T +V A + L G+Q H +IR+G NV + ++ MY++CG I
Sbjct: 438 RGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 497
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
D+ F ++ N VSWN +I+A+A +G E A+ F++M +G PD ++ L +L AC
Sbjct: 498 KDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIAC 557
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
H G V + + F+ M +YGI P +HY C++D+L R G+ +A ++ MPFE D +
Sbjct: 558 SHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 617
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDP-QNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
W S+L AC I N L E AA+++ ++ +++A YV +SN+YAAAG W +V V+ M+
Sbjct: 618 WSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMR 677
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
E+G+ K AYSW+E+ +K+H F D +HP D+I ++ + +++
Sbjct: 678 ERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIE 724
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 156/311 (50%), Gaps = 39/311 (12%)
Query: 142 NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+T N + L+ G++ A +++++MP +N +S M+ G++K G++ AR L D M
Sbjct: 43 DTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMP 102
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PDY--------------------- 234
+ VV+WT+++ Y N F EA +LF +M PDY
Sbjct: 103 DRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQ 162
Query: 235 ----------DKNVF--VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQN 282
D N+F V ++ +C+V L+ A +LFE I KD V+FN +I GY ++
Sbjct: 163 VHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKD 222
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVC 342
G+ EA+ LF M + +P D T V A L G+Q H L + GF + SV
Sbjct: 223 GLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVG 282
Query: 343 NAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
N ++ YS+ +L++ F ++ + VS+N +I++++Q YE++L F +M GFD
Sbjct: 283 NQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFD 342
Query: 403 PDGITFLSLLS 413
F ++LS
Sbjct: 343 RRNFPFATMLS 353
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 230/514 (44%), Gaps = 63/514 (12%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N + L R G++SAA +++D+M K+ ++ N +I+GY + G L +++LF +MP + +
Sbjct: 47 SNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTV 106
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLK----------HG- 157
V+W ++ N+ D+AF F+ M T T+ ++ G H
Sbjct: 107 VTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAF 166
Query: 158 --RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
+L T LF + +L + + +D A L + + K+ V++ +ITGY
Sbjct: 167 AVKLGFDTNLF-------LTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGY 219
Query: 216 VKNERFCEARELFYRM--PDYDKNVFVVTAMI---------------------TGFCKVG 252
K+ + EA LF +M + + F + ++ TGF +
Sbjct: 220 EKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDA 279
Query: 253 MLEN--------------ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
+ N R LF + D VS+N +I+ Y+Q EE+L LF M M
Sbjct: 280 SVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCM 339
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ ++ + + L L GRQ H I ++ + V N+++ MY++C ++
Sbjct: 340 GFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEA 399
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
EL F+ + + VSW +I+ + Q G + L F++M D TF ++L A
Sbjct: 400 ELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGF 459
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ L +++ G + + + LVD+ ++ G ++ A Q+ + MP + + W +
Sbjct: 460 ASLLLGKQLHAFIIR-SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNA 517
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
L++A N + E A KM + Q +V ++
Sbjct: 518 LISAYADNGDGEAAIGAFTKMIQSGLQPDSVSIL 551
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR + + VF + + ++ G I A Q+F++M ++ ++WNA+I+ Y NG + +
Sbjct: 472 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAA 531
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAM 149
F M + VS ++ C ++ ++FQAM P++ Y M
Sbjct: 532 IGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKK--HYACM 589
Query: 150 ISGFLKHGRLEEATRLFEQMP 170
+ ++GR EA +L ++MP
Sbjct: 590 LDLLGRNGRFAEAEKLMDEMP 610
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N+ + ++ A +F ++ + ++W A+I+GY Q G LF M N
Sbjct: 382 VGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGAN 441
Query: 112 IVSWNCMIAGCIDNDR------IDDAFDYF--QAMPERNTATYNAMISGFLKHGRLEEAT 163
+ + A + + F ++ N + + ++ + K G +++A
Sbjct: 442 LRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 501
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
++FE+MP RN +S+ A++ + G+ + A + ++T MI ++
Sbjct: 502 QVFEEMPDRNAVSWNALISAYADNGDGEAA-----------IGAFTKMIQSGLQ------ 544
Query: 224 ARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----FNAMIAG 278
PD +V ++ +I G +E F+ + P ++ + M+
Sbjct: 545 --------PD---SVSILGVLI-ACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDL 592
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+NG EA +L M +M +PD+ SV AC
Sbjct: 593 LGRNGRFAEAEKL---MDEMPFEPDEIMWSSVLNAC 625
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 166/527 (31%), Positives = 290/527 (55%), Gaps = 16/527 (3%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
+V + ++ +++G + A+++FDQ+ K+V NA+I+ + NG ++ L+ M
Sbjct: 280 YVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAG 339
Query: 108 --PVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
PV + + C + G D R A ++M + N A +A+++ + K G E+
Sbjct: 340 ETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSM-QSNVAIQSALLTMYYKCGSTED 398
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
A +F M R+V+++ +M+ GF + A L M + V + + ++T +
Sbjct: 399 ADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLG 458
Query: 222 CEARELFYRMPDY------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E EL + + + + +VFV +++ + K G E+A ++F + K+ V++N+M
Sbjct: 459 LENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSM 518
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+ Y+ NG+ E ++ L +++ D ++ +V A S++ L +G+ H IR
Sbjct: 519 ISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQI 578
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+++ V NA+I MY +CG + ++L F + NLV+WN++IA + HG+ E+A+ F +
Sbjct: 579 PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKE 638
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M + PD +TFL+L+++C H+G V E ++LF+LM YG+ P EHY +VD+L RAG
Sbjct: 639 MKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAG 698
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L+ A+ +GMP +AD VW LL AC + N+ELGEL A + +++P + YV L N
Sbjct: 699 RLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLN 758
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
LY MW +R MK +G+ K SWIE+ N+V F GD S
Sbjct: 759 LYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSS 805
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 233/487 (47%), Gaps = 40/487 (8%)
Query: 14 RILFPPILRILSTPDSCGNF----TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAA 69
+ FP +L+ T S N T H+S + L S Y+ + I+ + G + +A
Sbjct: 55 KFTFPSLLK---TCASLSNLYHGRTIHASIVTMGLQSDPYI--ATSLINMYVKCGLLGSA 109
Query: 70 RQLFDQMT-----TKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
Q+FD+M+ D+ WN +I GY++ G +E F M +SW +AG
Sbjct: 110 LQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRM---QELSW--YMAGRQI 164
Query: 125 NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR-NVISYTAMLDG 183
+ I + M E + A+I + R EA LF ++ R N++++ M+ G
Sbjct: 165 HGYI------IRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGG 218
Query: 184 FMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEARELFYRMP--DYDKN 237
F++ G +K+ L +N S+T T E R++ + ++ +
Sbjct: 219 FVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDD 278
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+V T+++T + K G +E+A+ +F+++ K+ NAMI+ + NG A +AL L++ M
Sbjct: 279 PYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKA 338
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+ D T+ S+ + CS + + GR H VI+ ++NV++ +A++TMY +CG D
Sbjct: 339 GETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTED 398
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
++ F + ++V+W ++IA F Q+ ++ AL F M G D S++S
Sbjct: 399 ADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVIS---- 454
Query: 418 AGKVNESMDLFELM--VKVYGIIPSSEHYTC-LVDILSRAGQLEKAWQITQGMPFEADTG 474
AG E+++L L+ + + S C LVD+ S+ G E A + MP +
Sbjct: 455 AGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP-NKNLV 513
Query: 475 VWGSLLA 481
W S+++
Sbjct: 514 AWNSMIS 520
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNL------ 103
VFV + + S+ G +A +F M K+++ WN++I+ Y NG + S NL
Sbjct: 481 VFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQ 540
Query: 104 ----FQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
S+ + ++ +A + + A+ +P + NA+I ++K G L
Sbjct: 541 HGFYLDSVSITTVLVAVSSVAALLKGKTL-HAYQIRLQIPS-DLQVENALIDMYVKCGCL 598
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
+ A +FE MPRRN++++ +M+ G+ G ++A L
Sbjct: 599 KYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRL 635
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IRL + V NA I + G + A+ +F+ M ++++TWN++I GY +G +E+
Sbjct: 574 IRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAV 633
Query: 102 NLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISG 152
LF+ M + V++ +I C + +++ + FQ M E Y +++
Sbjct: 634 RLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDL 693
Query: 153 FLKHGRLEEATRLFEQMP 170
+ GRL++A MP
Sbjct: 694 LGRAGRLDDAYSFIRGMP 711
>gi|125602089|gb|EAZ41414.1| hypothetical protein OsJ_25936 [Oryza sativa Japonica Group]
Length = 1165
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 277/511 (54%), Gaps = 45/511 (8%)
Query: 54 NAKISALSRAGKISAARQLFDQMTT--KDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
A IS L++A + A ++++M +D + NA++ GY + G L + +F+ M V++
Sbjct: 135 GAIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRD 194
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
++SW+ M+ G + + +A F AMPERN ++ +MI G++K G + LF M R
Sbjct: 195 VISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRR 254
Query: 172 RNV------------------------------ISYTAMLDGFMKKG----------EVD 191
V IS LD F+ VD
Sbjct: 255 EGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVD 314
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
RA D M K++VSW +ITGYV+++ EA LF M + K+ T+M+ GF
Sbjct: 315 AKRAF-DCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLM--HQKDAVSWTSMVVGFANR 371
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G + + LFE++ KD V++ A+I+ + NG A+R F M + +P+ +
Sbjct: 372 GWMRESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLL 431
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
+A ++L +LN+GRQ+H I G+ + +V ++++MY++CG + ++ F I +P+L+
Sbjct: 432 SALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLI 491
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ N++I AF QHG E AL F++M G+ P+ +TFL +L+ C AG V + + FE M
Sbjct: 492 AINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESM 551
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
VYG+ P+ EHYTC+VD+L RAG L +A ++ MP + W +LL+A ++ N+
Sbjct: 552 RPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAF 611
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
++AA+K+ E DP ++ Y +LS ++++AGM
Sbjct: 612 AKIAAQKLLEKDPYDATAYTVLSRMFSSAGM 642
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 201/380 (52%), Gaps = 39/380 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA +++ R G++ A+ LFDQM ++DVI+W A++T Y G L ++ +F MP +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP--R 171
SWN +++ + R A F MP +N +Y A+ISG K L EA ++E+MP
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQW 161
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
R+ + A++ G+++ GE+ A + + M+ ++V+SW+ M+ G K+ EAR +F M
Sbjct: 162 RDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAM 221
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P ++NV T+MI G+ K GM + L L
Sbjct: 222 P--ERNVVSWTSMIRGYVKRGM-------------------------------CRDGLLL 248
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
F M + +Q + TL AC+A L EG Q H L+I GFE ++ + +++I MYSR
Sbjct: 249 FLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSR 308
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G ++D++ AF + ++VSWN++I + QH E+A + F M D +++ S+
Sbjct: 309 FGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLM----HQKDAVSWTSM 364
Query: 412 LSACGHAGKVNESMDLFELM 431
+ + G + ES++LFE M
Sbjct: 365 VVGFANRGWMRESVELFEQM 384
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 138/270 (51%), Gaps = 16/270 (5%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
N +I + +F+ ++ I SR G + A++ FD M KD+++WN++ITGY Q+ ++
Sbjct: 285 NLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVE 344
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
E+ LF+ M K+ VSW M+ G + + ++ + F+ MP ++ + A+IS F+ +G
Sbjct: 345 EAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGD 404
Query: 159 LEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDY-----MSFKNVVSWT 209
A R F +M + N I+++ +L +++ R Y F + V T
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVH-T 463
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ---- 265
+++ Y K R EA +F + + ++ + +MIT F + G +E+A LF ++Q
Sbjct: 464 SLVSMYAKCGRLAEAYHVFSSIS--NPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGY 521
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ V+F ++ G A+ G ++ F M
Sbjct: 522 KPNHVTFLGILTGCARAGFVQQGYNYFESM 551
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/527 (31%), Positives = 290/527 (55%), Gaps = 16/527 (3%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
+V + ++ +++G + A+++FDQ+ K+V NA+I+ + NG ++ L+ M
Sbjct: 685 YVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAG 744
Query: 108 --PVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
PV + + C + G D R A ++M + N A +A+++ + K G E+
Sbjct: 745 ETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSM-QSNVAIQSALLTMYYKCGSTED 803
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
A +F M R+V+++ +M+ GF + A L M + V + + ++T +
Sbjct: 804 ADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLG 863
Query: 222 CEARELFYRMPDY------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
E EL + + + + +VFV +++ + K G E+A ++F + K+ V++N+M
Sbjct: 864 LENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSM 923
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF 335
I+ Y+ NG+ E ++ L +++ D ++ +V A S++ L +G+ H IR
Sbjct: 924 ISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQI 983
Query: 336 EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQ 395
+++ V NA+I MY +CG + ++L F + NLV+WN++IA + HG+ E+A+ F +
Sbjct: 984 PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKE 1043
Query: 396 MGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAG 455
M + PD +TFL+L+++C H+G V E ++LF+LM YG+ P EHY +VD+L RAG
Sbjct: 1044 MKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAG 1103
Query: 456 QLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSN 515
+L+ A+ +GMP +AD VW LL AC + N+ELGEL A + +++P + YV L N
Sbjct: 1104 RLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLN 1163
Query: 516 LYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
LY MW +R MK +G+ K SWIE+ N+V F GD S
Sbjct: 1164 LYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSS 1210
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 239/504 (47%), Gaps = 55/504 (10%)
Query: 14 RILFPPILRILSTPDSCGNF----TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAA 69
+ FP +L+ T S N T H+S + L S Y+ + I+ + G + +A
Sbjct: 441 KFTFPSLLK---TCASLSNLYHGRTIHASIVTMGLQSDPYI--ATSLINMYVKCGLLGSA 495
Query: 70 RQLFDQMT-----TKDVITWNAIITGYWQNGFLQESKNLF---QSMPVK----------- 110
Q+FD+M+ D+ WN +I GY++ G +E F Q + ++
Sbjct: 496 LQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLG 555
Query: 111 --NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
N +SW +AG + I + F+ P TA +I + R EA LF +
Sbjct: 556 ICNRLSW--YMAGRQIHGYI--IRNMFEGDPYLETA----LIGMYSSCSRPMEAWSLFGK 607
Query: 169 MPRR-NVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCE 223
+ R N++++ M+ GF++ G +K+ L +N S+T T E
Sbjct: 608 LENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDF 667
Query: 224 AREL---FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
R++ +M ++ + +V T+++T + K G +E+A+ +F+++ K+ NAMI+ +
Sbjct: 668 GRQVHCDVIKM-NFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFI 726
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
NG A +AL L++ M + D T+ S+ + CS + + GR H VI+ ++NV+
Sbjct: 727 GNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVA 786
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
+ +A++TMY +CG D++ F + ++V+W ++IA F Q+ ++ AL F M G
Sbjct: 787 IQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEG 846
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELM--VKVYGIIPSSEHYTC-LVDILSRAGQL 457
D S++S AG E+++L L+ + + S C LVD+ S+ G
Sbjct: 847 VKADSDVMTSVIS----AGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFA 902
Query: 458 EKAWQITQGMPFEADTGVWGSLLA 481
E A + MP + W S+++
Sbjct: 903 ESAEMVFSSMP-NKNLVAWNSMIS 925
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNL------ 103
VFV + + S+ G +A +F M K+++ WN++I+ Y NG + S NL
Sbjct: 886 VFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQ 945
Query: 104 ----FQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
S+ + ++ +A + + A+ +P + NA+I ++K G L
Sbjct: 946 HGFYLDSVSITTVLVAVSSVAALLKGKTL-HAYQIRLQIPS-DLQVENALIDMYVKCGCL 1003
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYM----SFKNVVSWTVMITGY 215
+ A +FE MPRRN++++ +M+ G+ G ++A L M + + V++ +IT
Sbjct: 1004 KYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSC 1063
Query: 216 VKNERFCEARELFYRM 231
+ E LF M
Sbjct: 1064 SHSGMVEEGLNLFQLM 1079
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IRL + V NA I + G + A+ +F+ M ++++TWN++I GY +G +E+
Sbjct: 979 IRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAV 1038
Query: 102 NLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISG 152
LF+ M + V++ +I C + +++ + FQ M E Y +++
Sbjct: 1039 RLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDL 1098
Query: 153 FLKHGRLEEATRLFEQMP 170
+ GRL++A MP
Sbjct: 1099 LGRAGRLDDAYSFIRGMP 1116
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/570 (30%), Positives = 293/570 (51%), Gaps = 65/570 (11%)
Query: 82 ITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAF-DYFQ 136
+ WN +I+ Y +NG E+ + ++ M K I ++ ++ C +++D AF
Sbjct: 160 LPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKAC--GEKLDIAFGKKLH 217
Query: 137 AMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
A N +N+++S + K G L A LFE M R+ +S+ M+ G+ KG
Sbjct: 218 ASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWK 277
Query: 192 KARALSDYMSFK----NVVSWTVMITGYVKNERFCEARELFYRMPDY------------- 234
+A L M + N+++W + G V++ F EA EL M Y
Sbjct: 278 EAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGL 337
Query: 235 ------------------------DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
D V A+IT + + L +A LF+ + K+ +
Sbjct: 338 GACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNII 397
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++N+M++GY +EEA LF M+ ++P+ T+ S+ C+ + L G++ H +
Sbjct: 398 TWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYI 457
Query: 331 IRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+R GF+ + + N+++ MY+R G +L+++ F I + V++ ++IA + G +A
Sbjct: 458 LRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREA 517
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
L F +M PD +T +++LSAC H+G V E + LFELM YGIIP EH+ C+VD
Sbjct: 518 LKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVD 577
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+ RAG L KA ++ MP+ + +W +LL AC I+ N E+GE AA+K+ E+ P+NS
Sbjct: 578 LFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGY 637
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
YV+++N+YAAAG W + +VR M++ GV K +W+++G+ FL D S P ++K+
Sbjct: 638 YVLIANMYAAAGCWSKLAKVRTYMRDLGVRKAPGCAWVDVGSGFFPFLVDDTSKPHVNKL 697
Query: 570 HLELKRASVQMK-----------SVDDFVE 588
+ L+ + MK SVDD +E
Sbjct: 698 YPLLEGLTELMKDAEYVGKENVGSVDDVIE 727
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 179/394 (45%), Gaps = 60/394 (15%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV+N+ +S ++ G++S AR LF+ M +D ++WN +I+GY G +E+ LF M V
Sbjct: 229 LFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRV 288
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPE-----RNTATY-------------- 146
+ NI++WN + GC+ + ++A + M + AT
Sbjct: 289 EGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKL 348
Query: 147 --------------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
NA+I+ + + L A LF+ +N+I++ +ML G+
Sbjct: 349 GREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTH 408
Query: 187 KGEVDKARAL----------SDYMSFKNVVSWTVMITGYVKNERF-CEARELFYRMPDYD 235
++A L +Y++ +++ + + F C R +
Sbjct: 409 MDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHC----YILRRAGFK 464
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ + +++ + + G + A+ LF+ I +D V++ ++IAGY G EAL+LF M
Sbjct: 465 DYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEM 524
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
K ++PD T+V+V +ACS L+ EG + ++ G + ++ ++ R G
Sbjct: 525 KKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGL 584
Query: 355 ILDS-ELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ + E+ R + P+ W T++ A HG+ E
Sbjct: 585 LHKAKEMITRMPYRPSSAMWATLLGACRIHGNAE 618
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 169/399 (42%), Gaps = 81/399 (20%)
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------- 233
A +++ + + + W ++I+ YV+N EA + +M PD
Sbjct: 147 AHTITENSNILHPLPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGE 206
Query: 234 -----YDK-------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ K N+FV ++++ + K G L AR LFE + +D VS+N M
Sbjct: 207 KLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTM 266
Query: 276 IAGYA-----------------------------------QNGVAEEALRLFSGMIKMDM 300
I+GYA Q+G EEAL L S M +
Sbjct: 267 ISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGI 326
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
D + ACS + + GR+ H IR+ ++ +V NA+ITMYSRC + +
Sbjct: 327 DMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYN 386
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F+ + N+++WN++++ + E+A F +M L+G +P+ +T S+L C
Sbjct: 387 LFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVAN 446
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + +++ G + LVD+ +R+G++ +A ++ + D + SL+
Sbjct: 447 LQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSIS-RRDEVTYTSLI 505
Query: 481 AACVINLNVELGELAAK-----KMRELDPQNSAVYVMLS 514
A I G A K K R + P + + +LS
Sbjct: 506 AGYGIQGE---GREALKLFDEMKKRHIKPDHVTMVAVLS 541
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 1/204 (0%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
++++ +V ++T + +L +A + E + +N +I+ Y +NG+ EAL +
Sbjct: 124 FEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISSYVRNGLHGEALSAYK 183
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M ++PD T SV AC + G++ H + + N+ V N++++MY++ G
Sbjct: 184 QMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTG 243
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ + F + + VSWNT+I+ +A G +++A F +M + G + + IT+ ++
Sbjct: 244 ELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAG 303
Query: 414 ACGHAGKVNESMDLFELMVKVYGI 437
C +G E+++L M + YGI
Sbjct: 304 GCVQSGNFEEALELLSHM-RSYGI 326
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 134/281 (47%), Gaps = 19/281 (6%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
IR F V NA I+ SR + A LF TK++ITWN++++GY +E+
Sbjct: 357 IRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEAS 416
Query: 102 NLFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN-----TATYNAMISG 152
LF+ M + N V+ ++ C + ++ + R +N+++
Sbjct: 417 FLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDM 476
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSW 208
+ + G++ EA RLF+ + RR+ ++YT+++ G+ +GE +A L D M +++ V+
Sbjct: 477 YARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTM 536
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVV---TAMITGFCKVGMLENARLLFERIQ 265
+++ + E +LF MP + + M+ F + G+L A+ + R+
Sbjct: 537 VAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMP 596
Query: 266 PKDCVSFNAMIAGYAQ-NGVAEEALRLFSGMIKMDMQPDDA 305
+ + A + G + +G AE + ++ ++M+P+++
Sbjct: 597 YRPSSAMWATLLGACRIHGNAE--IGEWAAEKLLEMRPENS 635
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L+ L++G+Q H L+I GFE + + ++T Y+ + D+ + + + WN +
Sbjct: 106 LKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLL 165
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I+++ ++G + +AL + QM G PD T+ S+L ACG E +D+ K++
Sbjct: 166 ISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACG------EKLDI-AFGKKLHA 218
Query: 437 IIPSS------EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
I +S + LV + ++ G+L A + + M E D W ++++
Sbjct: 219 SINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENM-LERDDVSWNTMISG 269
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 299/552 (54%), Gaps = 18/552 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF N + A ++ KI ARQLFD++ D +++N +I+GY + LF+ M
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEAT 163
+ + +IA C D + F + ++ NA ++ + K G L EA
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 164 RLFEQMPR-RNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKN 218
+F M R+ +S+ +M+ + + E KA AL M FK ++ + ++
Sbjct: 194 SVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL 253
Query: 219 ERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLE---NARLLFERIQPKDCVSFN 273
+ R+ ++ + +N V + +I + K G + ++ +F+ I D V +N
Sbjct: 254 DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWN 313
Query: 274 AMIAGYAQNG-VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
MI+GY+ N ++EEA++ F M ++ +PDD + V V +ACS L ++ +Q H L I+
Sbjct: 314 TMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIK 373
Query: 333 NGFEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ +N +SV NA+I++Y + G + D+ F ++ N VS+N +I +AQHGH +AL+
Sbjct: 374 SHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALL 433
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
+ +M +G P+ ITF+++LSAC H GKV+E + F M + + I P +EHY+C++D+L
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLL 493
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
RAG+LE+A + MP++ + W +LL AC + N+ L E AA ++ + P + YV
Sbjct: 494 GRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYV 553
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHL 571
ML+N+YA A W ++ VR M+ + + K+ SWIE+ K H F+ D SHP I +++
Sbjct: 554 MLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNE 613
Query: 572 ELKRASVQMKSV 583
L+ +MK V
Sbjct: 614 YLEEMMKKMKKV 625
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 174/377 (46%), Gaps = 44/377 (11%)
Query: 134 YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
Y +++ +T N ++ + K GRL A F NV SY ++ + K ++ A
Sbjct: 34 YVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIA 93
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD-------------------- 233
R L D + + VS+ +I+GY A LF RM
Sbjct: 94 RQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR 153
Query: 234 ---------------YDKNVFVVTAMITGFCKVGMLENARLLFERI-QPKDCVSFNAMIA 277
+D V A +T + K G+L A +F + + +D VS+N+MI
Sbjct: 154 VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIV 213
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
Y Q+ +AL L+ MI + D TL SV A ++L L GRQ H +I+ GF
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ 273
Query: 338 NVSVCNAVITMYSRCG---GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY-EKALIFF 393
N V + +I YS+CG G+ DSE F++I SP+LV WNT+I+ ++ + E+A+ F
Sbjct: 274 NSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSF 333
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT--CLVDIL 451
QM G PD +F+ + SAC + ++ + L +K + IPS+ L+ +
Sbjct: 334 RQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH--IPSNRISVNNALISLY 391
Query: 452 SRAGQLEKAWQITQGMP 468
++G L+ A + MP
Sbjct: 392 YKSGNLQDARWVFDRMP 408
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 10/291 (3%)
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
Y K R AR FY + NVF ++ + K + AR LF+ I D VS+N
Sbjct: 53 YSKCGRLSYARAAFYSTEE--PNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNT 110
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+I+GYA A+ LF M K+ + D TL + AC ++ +Q H + G
Sbjct: 111 LISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGG 168
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIFF 393
F++ SV NA +T YS+ G + ++ F + + VSWN++I A+ QH KAL +
Sbjct: 169 FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALY 228
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M GF D T S+L+A + ++K G +S + L+D S+
Sbjct: 229 KEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA-GFHQNSHVGSGLIDFYSK 287
Query: 454 AGQLEKAWQITQGMP--FEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
G + + + D VW ++++ ++N EL E A K R++
Sbjct: 288 CGGCDGMYDSEKVFQEILSPDLVVWNTMISG--YSMNEELSEEAVKSFRQM 336
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 265/485 (54%), Gaps = 47/485 (9%)
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
+AF + A+ ++ A + I G HG++ + +FE + +IS + K
Sbjct: 48 NAFTFPFAL--KSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISM------YCKGSL 99
Query: 190 VDKARAL--SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD-------------- 233
VD AR + ++ S K V + +++GYV N + EA LF +M +
Sbjct: 100 VDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLI 159
Query: 234 -----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
+D +V VV IT + K G + A+ LF+ + K +
Sbjct: 160 PACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLI 219
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+NAM++GYAQNG+A L L+ M + PD TLV V ++C+ L + G + +
Sbjct: 220 SWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKI 279
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+GF +N + NA+I MY+RCG + ++ F + LVSW II + HGH E A+
Sbjct: 280 QASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAV 339
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDI 450
F +M +G +PDG F+ +LSAC HAG ++ ++ F++M + Y + P EHY+C+VD+
Sbjct: 340 QLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDL 399
Query: 451 LSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVY 510
L RAG+L++A + + MP + D VWG+LL AC I+ NVEL ELA +++ EL+P+N Y
Sbjct: 400 LGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYY 459
Query: 511 VMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V+LSN+Y+ A + V R+R++MKE+ + K S++E+ +VH F+ GD +H D+I+
Sbjct: 460 VLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIY 519
Query: 571 LELKR 575
L+
Sbjct: 520 RVLEE 524
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 176/382 (46%), Gaps = 22/382 (5%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQ--MTTKDVITWNAIITGYWQNGFLQESKNLFQSM- 107
FV IS + + AR++F++ + K + +NA+++GY N E+ LF+ M
Sbjct: 85 FVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMN 144
Query: 108 ----PVKNIVSWNCMIAGCID--NDRIDDAF--DYFQAMPERNTATYNAMISGFLKHGRL 159
PV N V+ +I C+ N + + + + + + N I+ ++K G +
Sbjct: 145 EEGVPV-NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSV 203
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKN- 218
A +LF++MP + +IS+ AM+ G+ + G L M V V + G + +
Sbjct: 204 NYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSC 263
Query: 219 -----ERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ E + + N F+ A+I + + G L A+ +F+ + + VS+
Sbjct: 264 ANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWT 323
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
A+I GY +G E A++LF MI+ ++PD V V +ACS L ++G + ++ RN
Sbjct: 324 AIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRN 383
Query: 334 -GFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALI 391
E + ++ + R G + +++ + P+ W ++ A H + E A +
Sbjct: 384 YQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAEL 443
Query: 392 FFSQMGLNGFDPDGITFLSLLS 413
F + + +P+ I + LLS
Sbjct: 444 AFER--VIELEPENIGYYVLLS 463
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 47 TQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQS 106
T F+NNA I+ +R G ++ A+ +FD M + +++W AII GY +G + + LF+
Sbjct: 285 TSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKE 344
Query: 107 MPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHG 157
M I ++ C+++ C D +YF+ M E Y+ M+ + G
Sbjct: 345 MIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAG 404
Query: 158 RLEEATRLFEQMP 170
RL+EA L E MP
Sbjct: 405 RLKEAQTLIESMP 417
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 126/306 (41%), Gaps = 54/306 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V N I+ + G ++ A++LFD+M K +I+WNA+++GY QNG L+++M +
Sbjct: 187 VSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDM 246
Query: 110 KNI-------------------------VSWNCMIAGCIDNDRIDDAF------------ 132
+ V + +G N +++A
Sbjct: 247 NGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTK 306
Query: 133 --DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMK 186
F MPER ++ A+I G+ HG E A +LF++M R + ++ +L
Sbjct: 307 AQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSH 366
Query: 187 KGEVDKARAL-----SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
G D+ +Y ++ M+ + R EA+ L MP K V
Sbjct: 367 AGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMP--IKPDGAV 424
Query: 242 TAMITGFCKVGM-LENARLLFERI---QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ G CK+ +E A L FER+ +P++ + + Y+ ++ LR+ M +
Sbjct: 425 WGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKE 484
Query: 298 MDMQPD 303
++ D
Sbjct: 485 KKLKKD 490
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 3/187 (1%)
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
+AL L+ M++ +P+ T +C+AL L G Q H + + G V +I
Sbjct: 32 QALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 91
Query: 347 TMYSRCGGILDSELAFRQ-IHSPNL-VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
+MY + + ++ F + HS L V +N +++ + + +A++ F QM G +
Sbjct: 92 SMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVN 151
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+T L L+ AC + L +K YG C + + + G + A ++
Sbjct: 152 SVTLLGLIPACVSPINLELGSSLHCSTLK-YGFDSDVSVVNCFITMYMKCGSVNYAQKLF 210
Query: 465 QGMPFEA 471
MP +
Sbjct: 211 DEMPVKG 217
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/583 (31%), Positives = 289/583 (49%), Gaps = 77/583 (13%)
Query: 41 LIRLFSTQY-VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG---- 95
+++ T + F+ N ++ ++ +++A+ + + + V+TW A+I G QNG
Sbjct: 32 ILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVS 91
Query: 96 ----------------------FLQESKNLFQSMPVKNIVSW-------NCMIAGCIDND 126
L+ S L K + + N + GC D
Sbjct: 92 ALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFD 151
Query: 127 R------IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVIS 176
++DA+ F MP RN T+NA IS + HGR E++ F ++ R + I+
Sbjct: 152 MYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSIT 211
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+ A L+ A SD + C+ R Y +
Sbjct: 212 FCAFLN------------ACSDKLGLG----------------PGCQLHGFIIR-SGYGQ 242
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
NV V +I + K G +E + ++F+R+ ++ VS++++IA Y QN E+A LF
Sbjct: 243 NVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRAR 302
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
K D++P D + SV AC+ L + GR L ++ E N+ V +A++ MY +CG I
Sbjct: 303 KEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSID 362
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSAC 415
++E AF + NLVSWN ++ +A GH KA+ +M G P ++ + LSAC
Sbjct: 363 NAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSAC 422
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
AG + M +FE M + YG+ P EHY CLVD+L RAG +E A+ + MPF +
Sbjct: 423 SRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISI 482
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WG+LL AC ++ ELG+LAA+K+ ELDP++S +V+LSN++AA G W +VT VR MKE
Sbjct: 483 WGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKE 542
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSH---PCIDKIHLELKR 575
G+ K +SWI + +++H F D SH P I I +L++
Sbjct: 543 VGIKKGAGFSWITVDSRIHMFQAKDKSHEKDPEIQDILGKLRK 585
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 150/354 (42%), Gaps = 45/354 (12%)
Query: 15 ILFPPILRILSTPDS---------CGNFTPHSSNC-----LIRLFSTQYVFVNNAKISAL 60
I F +LR+ PDS C + C +IR Q V V+N I
Sbjct: 195 IAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFY 254
Query: 61 SRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA 120
+ G++ + +FD+M ++ ++W+++I Y QN +++ LF ++I + M++
Sbjct: 255 GKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVS 314
Query: 121 ----GCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR 172
C I+ +A E+N +A++ + K G ++ A + F MP R
Sbjct: 315 SVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPER 374
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKN--VVSWTVMITGYVKNERFCEAR---EL 227
N++S+ A+L G+ +G +KA AL + M+ V S+ +I R + + ++
Sbjct: 375 NLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKI 434
Query: 228 FYRMPD---YDKNVFVVTAMITGFCKVGMLENARLLFERIQ-PKDCVSFNAMIAGYAQNG 283
F M + + ++ + GM+E A +R+ P + A++ +G
Sbjct: 435 FESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHG 494
Query: 284 VAEEALRLFSGMIKMDMQPDDA----TLVSVFTACSALQLLNEGRQSHVLVIRN 333
E + ++D P D+ L ++F A GR V V+RN
Sbjct: 495 KPELGKLAAEKLFELD--PKDSGNHVVLSNMFAA--------TGRWEEVTVVRN 538
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 191/602 (31%), Positives = 294/602 (48%), Gaps = 113/602 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV N+ IS + IS AR LFD + D ++ N ++ GY ++G L +++LF+ MP+
Sbjct: 87 IFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPI 146
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNTATYNAMISGFLKHG------ 157
K VS+ M+ G N+ +A F+ M P N T ++IS + G
Sbjct: 147 KGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIP--NEVTLASVISAYSHVGGILNCR 204
Query: 158 -----------------------------RLEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
L A LF+++P RNV+++ ML+G+ K G
Sbjct: 205 MLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSG 264
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD--------- 233
VD AR L + + K+VVSW +I GYV+ ER EA ++ M P+
Sbjct: 265 LVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLIS 324
Query: 234 ----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+D F+ +I + G + A L FE S
Sbjct: 325 ACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSS 384
Query: 272 FNAMIAGYAQNGVAEE-------------------------------ALRLFSGMIKMDM 300
+NA+I+G+ +NG+ E+ AL+LF M+ +
Sbjct: 385 WNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGV 444
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
QP++ T+VSVF+A + L L EGR +H ++ N N ++ A+I MY++CG I +
Sbjct: 445 QPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQ 504
Query: 361 AFRQIHS--PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F +I ++ WN II A HGH +L FSQ+ P+ ITF+ +LSAC HA
Sbjct: 505 LFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHA 564
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
G V+ F+ M +Y I P+ +HY C++D+L RAG+L++A ++ + MP +AD +WG+
Sbjct: 565 GLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGT 624
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LLAAC + NVE+GE AA+ + +LD + A V+LSN+YA AG W D VR M+ Q +
Sbjct: 625 LLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRM 684
Query: 539 TK 540
K
Sbjct: 685 KK 686
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 232/498 (46%), Gaps = 61/498 (12%)
Query: 19 PILRILSTPDSCGNFTPHSSNCLIRLFS----TQYVFVNNAKISALSRAGKISAARQ--- 71
P L+ +S S PH + L F+ TQ+ +SAL + A Q
Sbjct: 16 PNLKWVSAAPS--QLPPHPIDHLRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQ 73
Query: 72 ----LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDR 127
+F ++ N++I+ Y + + +++LF + V + VS N M+AG + +
Sbjct: 74 IHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGS 133
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI----SYTAMLDG 183
+D+A F+ MP + +Y M+ G ++ EA +F+ M VI + +++
Sbjct: 134 LDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISA 193
Query: 184 FMKKGEVDKARALSDYMSFK------NVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
+ G + R L +SFK N+V+ T ++ Y AR LF +P ++N
Sbjct: 194 YSHVGGILNCRML-HALSFKLGLEALNIVA-TNLVHMYCVCSSLGNARVLFDEIP--ERN 249
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
V M+ G+ K G+++ AR LFERI KD VS+ +I GY Q EALR++ M++
Sbjct: 250 VVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLR 309
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA-------------------- 337
+ P++ +V + +AC ++EG+Q H +++R GF+
Sbjct: 310 TGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINL 369
Query: 338 -----------NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
+VS NA+I+ + R G I + F ++ ++ SW+++I+ ++Q+
Sbjct: 370 AFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQP 429
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY-T 445
+ AL F +M G P+ IT +S+ SA G + E E ++ IP +++
Sbjct: 430 DLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILS--NSIPLNDNLNA 487
Query: 446 CLVDILSRAGQLEKAWQI 463
L+D+ ++ G + A Q+
Sbjct: 488 ALIDMYAKCGSITIALQL 505
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 150/342 (43%), Gaps = 58/342 (16%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
Y F+ I + G+I+ A F+ + V +WNA+I+G+ +NG +++++ LF MP
Sbjct: 350 YDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMP 409
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
+++ SW+ MI+G N++ D A F M++G ++ + +
Sbjct: 410 ERDVFSWSSMISGYSQNEQPDLALQLFH-----------EMVAGGVQPNEITMVS----- 453
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
V S A L G + +G LS+ + + ++ +I Y K A +LF
Sbjct: 454 -----VFSAIATL-GTLMEGRWAHEYILSNSIPLNDNLN-AALIDMYAKCGSITIALQLF 506
Query: 229 YRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEA 288
Y + D +V A+I G A +G A +
Sbjct: 507 YEIQDRVSSVSPWNAIICGL-------------------------------AMHGHANVS 535
Query: 289 LRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN--GFEANVSVCNAVI 346
L+LFS + ++ ++P+ T + V +AC L++ G + + ++N E N+ +I
Sbjct: 536 LKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTG-EKYFKGMKNLYNIEPNIKHYGCMI 594
Query: 347 TMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGHYE 387
+ R G + ++ R++ ++V W T++AA HG+ E
Sbjct: 595 DLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVE 636
>gi|125560040|gb|EAZ05488.1| hypothetical protein OsI_27705 [Oryza sativa Indica Group]
Length = 1165
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 277/511 (54%), Gaps = 45/511 (8%)
Query: 54 NAKISALSRAGKISAARQLFDQMTT--KDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
A IS L++A + A ++++M +D + NA++ GY + G L + +F+ M V++
Sbjct: 135 GAIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRD 194
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
++SW+ M+ G + + +A F AMPERN ++ +MI G++K G + LF M R
Sbjct: 195 VISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRR 254
Query: 172 RNV------------------------------ISYTAMLDGFMKKG----------EVD 191
V IS LD F+ VD
Sbjct: 255 EGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGCMVD 314
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
RA D M K++VSW +ITGYV+++ EA LF M + K+ T+M+ GF
Sbjct: 315 AKRAF-DCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLM--HQKDAVSWTSMVVGFANR 371
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G + + LFE++ KD V++ A+I+ + NG A+R F M + +P+ +
Sbjct: 372 GWMRESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLL 431
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
+A ++L +LN+GRQ+H I G+ + +V ++++MY++CG + ++ F I +P+L+
Sbjct: 432 SALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLI 491
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ N++I AF QHG E AL F++M G+ P+ +TFL +L+ C AG V + + FE M
Sbjct: 492 AINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESM 551
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
VYG+ P+ EHYTC+VD+L RAG L +A ++ MP + W +LL+A ++ N+
Sbjct: 552 RPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAF 611
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGM 522
++AA+K+ E DP ++ Y +LS ++++AGM
Sbjct: 612 AKIAAQKLLEKDPYDATAYTVLSRMFSSAGM 642
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 201/380 (52%), Gaps = 39/380 (10%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
NA +++ R G++ A+ LFDQM ++DVI+W A++T Y G L ++ +F MP +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP--R 171
SWN +++ + R A F MP +N +Y A+ISG K L EA ++E+MP
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQW 161
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
R+ + A++ G+++ GE+ A + + M+ ++V+SW+ M+ G K+ EAR +F M
Sbjct: 162 RDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAM 221
Query: 232 PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
P ++NV T+MI G+ K GM + L L
Sbjct: 222 P--ERNVVSWTSMIRGYVKRGM-------------------------------CRDGLLL 248
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
F M + +Q + TL AC+A L EG Q H L+I GFE ++ + +++I MYSR
Sbjct: 249 FLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSR 308
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
G ++D++ AF + ++VSWN++I + QH E+A + F M D +++ S+
Sbjct: 309 FGCMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLM----HQKDAVSWTSM 364
Query: 412 LSACGHAGKVNESMDLFELM 431
+ + G + ES++LFE M
Sbjct: 365 VVGFANRGWMRESVELFEQM 384
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 138/270 (51%), Gaps = 16/270 (5%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ 98
N +I + +F+ ++ I SR G + A++ FD M KD+++WN++ITGY Q+ ++
Sbjct: 285 NLIISMGFELDIFLGDSIIIMYSRFGCMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVE 344
Query: 99 ESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGR 158
E+ LF+ M K+ VSW M+ G + + ++ + F+ MP ++ + A+IS F+ +G
Sbjct: 345 EAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGD 404
Query: 159 LEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDY-----MSFKNVVSWT 209
A R F +M + N I+++ +L +++ R Y F + V T
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVH-T 463
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ---- 265
+++ Y K R EA +F + + ++ + +MIT F + G +E+A LF ++Q
Sbjct: 464 SLVSMYAKCGRLAEAYHVFSSIS--NPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGY 521
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ V+F ++ G A+ G ++ F M
Sbjct: 522 KPNHVTFLGILTGCARAGFVQQGYNYFESM 551
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/459 (35%), Positives = 251/459 (54%), Gaps = 46/459 (10%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
A++ + K+G +E A F++MP ++ I ++ G+ K G+VDKAR L D M +
Sbjct: 109 TALVDFYAKNGDMESAVSAFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSA 168
Query: 207 SWTVMITGYVKNERFCEARELFYRM----------------------PDYD--------- 235
SW MI Y F EA LF RM D D
Sbjct: 169 SWNSMIACYAHGGEFREALALFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLI 228
Query: 236 -----KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
+NV V TA++ + K +++AR F+R+ +D V+++ MIAGYAQNG E+L
Sbjct: 229 GEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLE 288
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE-----ANVSVCNAV 345
LF M D +P++ TLV V +AC+ L G V I N E + +A+
Sbjct: 289 LFERMKATDCRPNEVTLVGVISACAQL-----GSDELVEQIGNYAENQRLPLTSYLGSAL 343
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I MY+RCG + + F ++ +++WN++I A +G E A+ + +M NG P+
Sbjct: 344 IDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNE 403
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
ITF++LL+AC HAG V++ M FE M + + + P EH C+VD+L ++G L +A++
Sbjct: 404 ITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFIC 463
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRD 525
M E + +W +LL++C + +VEL +LA++K+ ++P NS++YV+LSN+YA AG+W D
Sbjct: 464 DMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGD 523
Query: 526 VTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
+R LM+ + V K AYSWI++ +VH FL D HP
Sbjct: 524 AREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHP 562
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 203/435 (46%), Gaps = 61/435 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A + ++ G + +A FD+M KD I N +ITGY + G + +++ LF M
Sbjct: 105 VFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMER 164
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAM----PERNTATYNAMISGFLKHGRLEEATR- 164
+ SWN MIA +A F M N T ++ S K G L+ R
Sbjct: 165 RTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRV 224
Query: 165 --LFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
L + +NVI +TA+++ ++K +D AR D MS ++VV+W+ MI GY +N R
Sbjct: 225 RDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPL 284
Query: 223 EARELFYRMP-------------------------------DYDKN------VFVVTAMI 245
E+ ELF RM +Y +N ++ +A+I
Sbjct: 285 ESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALI 344
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ + G + AR +F R++ K +++N+MI G A NG AE+A+ L+ M + +QP++
Sbjct: 345 DMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEI 404
Query: 306 TLVSVFTACSALQLLNEG-------RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
T V++ AC+ L+++G ++ H++ V C ++ + + GG+ ++
Sbjct: 405 TFVALLAACTHAGLVDQGMAFFEEMKREHLV------SPQVEHCACIVDLLCKSGGLWEA 458
Query: 359 ELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC-G 416
+ PN V W T++++ H E L + L +PD + LLS
Sbjct: 459 YKFICDMEVEPNAVIWTTLLSSCRAHADVE--LAKLASRKLLAMEPDNSSIYVLLSNIYA 516
Query: 417 HAGKVNESMDLFELM 431
AG ++ ++ +LM
Sbjct: 517 DAGLWGDAREIRDLM 531
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 119/280 (42%), Gaps = 41/280 (14%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q V V+ A + + I AR+ FD+M+ +DV+ W+ +I GY QNG ES LF+ M
Sbjct: 234 QNVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERM 293
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRL-- 165
+ N T +IS + G E ++
Sbjct: 294 KATDC---------------------------RPNEVTLVGVISACAQLGSDELVEQIGN 326
Query: 166 FEQMPRRNVISY--TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+ + R + SY +A++D + + G V +AR++ M K V++W MI G N +
Sbjct: 327 YAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAED 386
Query: 224 ARELFYRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA-----MI 276
A L+ +M + N A++ G+++ FE ++ + VS ++
Sbjct: 387 AISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIV 446
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
++G EA + + M+++P+ ++ ++C A
Sbjct: 447 DLLCKSGGLWEAYKF---ICDMEVEPNAVIWTTLLSSCRA 483
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 37/209 (17%)
Query: 257 ARLLFE---RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
AR LF+ R P C +F ++ ++ + L+ FS M + + VF +
Sbjct: 23 ARNLFDAVPRPAPALCSTF---LSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKS 79
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI--------------------------- 346
C+ +GRQ H + G +V V A++
Sbjct: 80 CALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPI 139
Query: 347 ----TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
T YS+ G + + F + SWN++IA +A G + +AL F +M G
Sbjct: 140 NCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGAR 199
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELM 431
P+ IT S+ S C +G ++ + +L+
Sbjct: 200 PNAITITSVFSICAKSGDLDTGKRVRDLI 228
>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
Length = 638
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 186/594 (31%), Positives = 308/594 (51%), Gaps = 23/594 (3%)
Query: 20 ILRILSTPDSCGNFTPHSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTT 78
IL+ S+PD +C +I+ + V V + I+ +R+ A ++FD M
Sbjct: 47 ILQACSSPDY--RIFGQQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMAC 104
Query: 79 KDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAGCIDNDRIDDAFDY 134
KDV +N +I Y + G +++ +F +M N ++ +I+ C + I++ +
Sbjct: 105 KDVRCFNFMILEYARAGNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQF 164
Query: 135 ----FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
F+ T+ NA+I+ + K G EA R+F M RN+IS+TA++ G+ + G
Sbjct: 165 LGLSFKYGFLNETSIGNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSG-- 222
Query: 191 DKARALSDYMSFK--NVVSWTVMITGYVKNERFCEARELFYRMPD------YDKNVFVVT 242
D +A+ +M V + ++T + C EL ++ Y V + T
Sbjct: 223 DGKKAVDTFMELHLCGVNFDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGT 282
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV--AEEALRLFSGMIKMDM 300
A++ + K G L +AR++F+ + K SFNA++AG+ +N E+ + LF+ +
Sbjct: 283 ALVDLYAKCGNLMSARMVFDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGI 342
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+PD T + + + L GR H I+ GFEA++SV NAVITMY++CG I ++
Sbjct: 343 KPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHR 402
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++ + +SWN +I+A+A HG K L+ F +M F PD IT LS+L AC ++G
Sbjct: 403 MFNVMNDHDSISWNAMISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGL 462
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ + LF +M YGI P EHY C+VD+L RAG L +A I PF T +W +L+
Sbjct: 463 FRDGISLFNVMEPKYGIKPLLEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLV 522
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
C + + G+LA+K + EL P + Y+++SN+YA M + +VR +M + ++K
Sbjct: 523 NVCKLCGDRNFGKLASKYLLELSPVEAGSYILVSNMYAGERMLDEAAKVRTVMNDLKLSK 582
Query: 541 QCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEIATSWS 594
+ SWIEI +KVH+F+ HP ++I+ EL M+ D WS
Sbjct: 583 EAGTSWIEIDDKVHHFVASGKDHPESNEIYAELDLLRDDMRWRYDVANFNLIWS 636
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 153/361 (42%), Gaps = 57/361 (15%)
Query: 107 MPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
M V+N ++W +I G +D++ + A + M + A S L+ + R+F
Sbjct: 1 MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPD-YRIF 59
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
Q F+ K D +NVV T +I Y +++ F +A +
Sbjct: 60 GQ-----------QFHCFVIKCGFD-----------ENVVVGTSLIAMYTRSKLFGDAEK 97
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAE 286
+F M C KD FN MI YA+ G E
Sbjct: 98 VFDSMA----------------C-----------------KDVRCFNFMILEYARAGNGE 124
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
+A+R+F M+ +QP+D T ++ +AC + EG Q L + GF S+ NA+I
Sbjct: 125 KAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAII 184
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MY + G ++E F + NL+SW +I+ + + G +KA+ F ++ L G + D
Sbjct: 185 NMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSS 244
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
++L C + + + L++K+ G + T LVD+ ++ G L A + G
Sbjct: 245 LLTTILDGCSECRNLELGLQIHGLVIKL-GYACAVNIGTALVDLYAKCGNLMSARMVFDG 303
Query: 467 M 467
+
Sbjct: 304 L 304
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 272/489 (55%), Gaps = 13/489 (2%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N++IT Y + G ++ +F M VK++VSW ++ ++ +D A AMPERN
Sbjct: 289 NSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEV 348
Query: 145 TYNAMISGFLKHGRLEEATRLFEQM----PRRNVISYTAMLDGF-----MKKGEVDKARA 195
++ +I+ + G EA +L+ QM R N+ ++++L ++ G AR+
Sbjct: 349 SWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARS 408
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLE 255
L S NV + +I Y K ++ +A+ +F +P+ KN+ ++ +G+ G +
Sbjct: 409 L-KMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPE--KNIVCWNSLASGYSYNGKMV 465
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
A LF+++ ++ S+N +I+GYAQN +ALR F+ M+ P + T SV AC+
Sbjct: 466 EAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACA 525
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L L G+ +H I+ G E ++ + A+ MY++ G + S+ F Q+ N V+W
Sbjct: 526 NLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTA 585
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+I A++G E++++ F M G P+ TFL+LL AC H G V +++ FE M + +
Sbjct: 586 MIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKM-QAW 644
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
GI P +HYTC+VD+L+RAG+L +A + P +++ W +LL+AC N E+GE A
Sbjct: 645 GISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSACNTYKNEEIGERA 704
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
AK++ EL N+A YV+LSN+YA+ G W+D R+R+LMK + K SW+++ + H
Sbjct: 705 AKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRGQYHA 764
Query: 556 FLGGDMSHP 564
F + HP
Sbjct: 765 FFSWEAKHP 773
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 212/438 (48%), Gaps = 44/438 (10%)
Query: 83 TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN 142
T++ ++ + + G + ++ LF MP +++VS+ M+ + R+ +A + ++ P +
Sbjct: 154 TYDFMVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGS 213
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQM----PRRNVISYTAMLDGFMKKGEVDKARALSD 198
A + A ISGF+++ A +F +M R N I++ M+ + GE A ++
Sbjct: 214 VAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVG 273
Query: 199 YMSFKNVVSWTV-----MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
N ++ +IT Y++ AR++F M K+V TA++ + + G
Sbjct: 274 SAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMD--VKDVVSWTALLDVYSESGD 331
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
L+ AR + + + ++ VS+ +IA + Q G A EA++L+S M+ +P+ + SV +A
Sbjct: 332 LDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSA 391
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC--------------------- 352
C+ L+ L G + H ++ G NV V +++I MY +C
Sbjct: 392 CATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCW 451
Query: 353 ----------GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
G ++++ F+++ + NL SWNTII+ +AQ+ + AL F+ M +G
Sbjct: 452 NSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQV 511
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P ITF S+L AC + + +K+ G+ S T L D+ +++G L+ + +
Sbjct: 512 PGEITFSSVLLACANLCSLVTGKMAHAKTIKL-GMEESIFIGTALSDMYAKSGDLQSSKR 570
Query: 463 ITQGMPFEADTGVWGSLL 480
+ MP D W +++
Sbjct: 571 MFYQMPERNDV-TWTAMI 587
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 154/333 (46%), Gaps = 32/333 (9%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
+++ S+ VFV+++ I + K A+ +FD + K+++ WN++ +GY NG + E+
Sbjct: 409 LKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAM 468
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM------PERNT--------ATYN 147
LF+ MP +N+ SWN +I+G N + DA F AM P T A
Sbjct: 469 YLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLC 528
Query: 148 AMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVS 207
++++G + H + + ++ TA+ D + K G++ ++ + M +N V+
Sbjct: 529 SLVTGKMAHA------KTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVT 582
Query: 208 WTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
WT MI G +N E+ LF M N A++ G++E A FE++Q
Sbjct: 583 WTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQ 642
Query: 266 -----PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
PK+ + M+ A+ G EA L ++K + + + ++ +AC+ +
Sbjct: 643 AWGISPKE-KHYTCMVDVLARAGRLIEAEAL---LMKTPSKSEANSWAALLSACNTYKNE 698
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
G ++ + G + N + + MY+ CG
Sbjct: 699 EIGERAAKRLHELGKD-NTAGYVLLSNMYASCG 730
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 75/247 (30%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVS--------------------------- 271
F M+ K G + +AR LF+ + + VS
Sbjct: 153 FTYDFMVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPSG 212
Query: 272 ----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS-------ALQLL 320
F A I+G+ +N + AL +F M+ ++P+ T V + AC A+ ++
Sbjct: 213 SVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIV 272
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-------------- 366
+S N FE+++ V N++IT+Y R G + F ++
Sbjct: 273 GSAIKS------NFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVY 326
Query: 367 -----------------SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
N VSW T+IA Q G+ +A+ +SQM +G P+ F
Sbjct: 327 SESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFS 386
Query: 410 SLLSACG 416
S+LSAC
Sbjct: 387 SVLSACA 393
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/446 (34%), Positives = 261/446 (58%), Gaps = 19/446 (4%)
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
L+ GR A R+ R + T ++ + + G ++ AR + D M +NVVSWT MI+
Sbjct: 51 LREGRQVHA-RMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMIS 109
Query: 214 GYVKNERFCEARELFYRM-----------------PDYDKNVFVVTAMITGFCKVGMLEN 256
GY +NER +A ELF M +++ ++FV ++++ + K ++
Sbjct: 110 GYSQNERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQE 169
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR +F+ + +D VS+ A+++GY Q G+ EEAL LF + MQ + T ++ A S
Sbjct: 170 ARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSG 229
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L ++ G+Q H L++R +++ N++I MYS+CG +L S F + ++VSWN +
Sbjct: 230 LSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAM 289
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
+ + +HG + + F M + PD +T L++LS H G V+E +D+F+ +VK
Sbjct: 290 LMGYGRHGLAHEVVQLFRSM-CDEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQS 348
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
+ ++EHY C++D+L R+GQL+KA + + MPF+ +WGSLL AC ++ NV +GE A
Sbjct: 349 TLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVA 408
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
+K+ +++P+N+ YV+LSN+YAAAGMW+DV RVR LM ++ V K+ SW+ + +H F
Sbjct: 409 QKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTF 468
Query: 557 LGGDMSHPCIDKIHLELKRASVQMKS 582
+ HP + I+ ++K V +K+
Sbjct: 469 HSCERFHPRKEDINAKIKEIYVAIKA 494
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 193/408 (47%), Gaps = 65/408 (15%)
Query: 87 IITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP------- 139
++ Y + G L++++N+ MP +N+VSW MI+G N+R D A++ F M
Sbjct: 76 LVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQV 135
Query: 140 ------------ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
E + ++++ + K ++EA R+F+ +P R+V+SYTA+L G+ +
Sbjct: 136 KQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQL 195
Query: 188 G----EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV-- 241
G +D R L + N V++T ++ +++ + + F+
Sbjct: 196 GLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQ 255
Query: 242 TAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQ 301
++I + K G L +R +F+ + + VS+NAM+ GY ++G+A E ++LF M +++
Sbjct: 256 NSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EVK 314
Query: 302 PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELA 361
PD TL++V + S L++EG + + + ++ S +L++E
Sbjct: 315 PDSVTLLAVLSGYSHGGLVDEG---------------LDMFDHIVKEQST---LLNTE-- 354
Query: 362 FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKV 421
+ +I + G +KAL +M F P + SLL AC +V
Sbjct: 355 ----------HYGCVIDLLGRSGQLQKALNLIEKM---PFQPTRAIWGSLLGAC----RV 397
Query: 422 NESMDLFELMV-KVYGIIP-SSEHYTCLVDILSRAGQLEKAWQITQGM 467
+ ++ + E + K+ I P ++ +Y L +I + AG + +++ + M
Sbjct: 398 HTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLM 445
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 152/320 (47%), Gaps = 38/320 (11%)
Query: 212 ITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
IT V+ E R++ RM Y +++ T ++ + + G LE+AR + + + ++
Sbjct: 42 ITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNV 101
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
VS+ AMI+GY+QN ++A LF M++ +++ +Q H
Sbjct: 102 VSWTAMISGYSQNERPDQAWELFIMMLRAG--------------------IHQVKQVHAF 141
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
++ FE ++ V ++++ MY++ I ++ F + + ++VS+ I++ + Q G E+A
Sbjct: 142 AVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEA 201
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE------H 443
L F + G + +TF +LL+A SMD + +V+G+I E
Sbjct: 202 LDLFRLLYNEGMQCNQVTFTALLNALSGL----SSMDYGK---QVHGLILRRELPFFMAL 254
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN-LNVELGELAAKKMREL 502
L+D+ S+ G+L + ++ MP E W ++L + L E+ +L E+
Sbjct: 255 QNSLIDMYSKCGKLLYSRRVFDSMP-ERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDEV 313
Query: 503 DPQNSAVYVMLSNLYAAAGM 522
P + + +LS Y+ G+
Sbjct: 314 KPDSVTLLAVLSG-YSHGGL 332
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 48/280 (17%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
++FV ++ + +++ I AR++FD + +DV+++ AI++GY Q G +E+ +LF+ +
Sbjct: 150 HMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLY 209
Query: 109 VK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERN----TATYNAMISGFLKHGRLE 160
+ N V++ ++ +D + R A N++I + K G+L
Sbjct: 210 NEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLL 269
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+ R+F+ MP R+V+S+ AML G+ + G
Sbjct: 270 YSRRVFDSMPERSVVSWNAMLMGYGRHGLAH----------------------------- 300
Query: 221 FCEARELFYRMPDYDK-NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA----- 274
E +LF M D K + + A+++G+ G+++ +F+ I + N
Sbjct: 301 --EVVQLFRSMCDEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGC 358
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+I ++G ++AL L KM QP A S+ AC
Sbjct: 359 VIDLLGRSGQLQKALNLIE---KMPFQPTRAIWGSLLGAC 395
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 14 RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLF 73
++ F +L LS S ++ ++R ++ + N+ I S+ GK+ +R++F
Sbjct: 217 QVTFTALLNALSGLSSM-DYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVF 275
Query: 74 DQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--PVK-NIVSWNCMIAGCIDNDRIDD 130
D M + V++WNA++ GY ++G E LF+SM VK + V+ +++G +D+
Sbjct: 276 DSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDEVKPDSVTLLAVLSGYSHGGLVDE 335
Query: 131 AFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMP 170
D F + + NT Y +I + G+L++A L E+MP
Sbjct: 336 GLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMP 380
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 290/552 (52%), Gaps = 32/552 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV+N+ +S S+ G++ AR++FD +D ++WN++++GY + G +E +F M
Sbjct: 144 VFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRR 203
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHG 157
N + +I C + R D D +A+ + + +AMI + K G
Sbjct: 204 GGMGLNSFALGSVIKCC--SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKG 261
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM------ 211
L EA LF + NV+ + M+ GF + V S+ ++ + V M
Sbjct: 262 ALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFT 321
Query: 212 ---------ITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
+ GY++ + + + Y + D F+ +A+I + G +E+ F
Sbjct: 322 FSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDD---FIGSALIDLYFNSGCMEDGFRCFR 378
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
D V++ AM++G QN + E+AL LF + ++PD T+ SV AC++L +
Sbjct: 379 SSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARA 438
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G Q ++GF+ + N+ + MY+R G + + F+++ S ++VSW+ +I+ AQ
Sbjct: 439 GEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQ 498
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
HG AL FF +M P+ ITFL +L+AC H G V+E + +E M K YG+ P+ +
Sbjct: 499 HGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIK 558
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
H TC+VD+L RAG+L A F AD +W SLLA+C I+ ++E G+L A ++ EL
Sbjct: 559 HCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMEL 618
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P +SA YV+L N+Y AG ++ R LMK++GV K+ SWIE+ VH F+ GD S
Sbjct: 619 EPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKS 678
Query: 563 HPCIDKIHLELK 574
HP I+ +L+
Sbjct: 679 HPESSAIYTKLE 690
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 180/367 (49%), Gaps = 27/367 (7%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKG----------EVDKARAL 196
N +++ + + G A RL ++MPRRN +S+ ++D + ++G +A
Sbjct: 47 NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
D S+ ++ G+++ R A + + VFV ++++ + K G +
Sbjct: 107 VDRFSYAAALAACSR-AGHLRAGRAVHALAI---LDGLSSGVFVSNSLVSMYSKCGEMGE 162
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR +F+ + +D VS+N++++GY + G EE +R+F+ M + M + L SV CS
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222
Query: 317 L--QLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
++ H VI+ G +++V + +A+I MY++ G ++++ FR + PN+V +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282
Query: 375 TIIAAFAQHGHY------EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
T+IA F + +AL +S++ G P TF S+L AC AG + +
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
++K Y + L+D+ +G +E ++ + P + D W ++++ CV N
Sbjct: 343 GQVIK-YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGCVQN-- 398
Query: 489 VELGELA 495
EL E A
Sbjct: 399 -ELHEKA 404
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 168/397 (42%), Gaps = 79/397 (19%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI---------------------AGCI 123
N ++ Y + G ++ L MP +N VS+N +I AG +
Sbjct: 47 NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG-V 105
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDG 183
D DR F Y A+ + A G L+ GR A + + + V +++
Sbjct: 106 DVDR----FSYAAALAACSRA-------GHLRAGRAVHALAILDGLS-SGVFVSNSLVSM 153
Query: 184 FMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------ 231
+ K GE+ +AR + D ++ VSW +++GYV+ E +F M
Sbjct: 154 YSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFAL 213
Query: 232 ---------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERI 264
D +VF+V+AMI + K G L A LF +
Sbjct: 214 GSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSV 273
Query: 265 QPKDCVSFNAMIAGYAQN------GVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
Q + V FN MIAG+ + VA EAL L+S + MQP + T SV AC+
Sbjct: 274 QEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAG 333
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L G+Q H VI+ F+ + + +A+I +Y G + D FR ++V+W +++
Sbjct: 334 YLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVS 393
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
Q+ +EKAL F + G PD T S+++AC
Sbjct: 394 GCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNAC 430
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 172/379 (45%), Gaps = 34/379 (8%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL- 97
C+I+ VF+ +A I ++ G + A LF + +V+ +N +I G+ + +
Sbjct: 236 GCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVI 295
Query: 98 -----QESKNLFQSMPVKNI---------VSWNCMIAGCIDNDRIDDAFDYFQAMPERNT 143
E+ L+ + + + V C +AG ++ + + + +
Sbjct: 296 GKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG-QVIKYTFQEDD 354
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL------- 196
+A+I + G +E+ R F P+ +++++TAM+ G ++ +KA +L
Sbjct: 355 FIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGA 414
Query: 197 ---SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGM 253
D + +V++ + E+ + F +D+ + + + + + G
Sbjct: 415 GLKPDLFTISSVMNACASLAVARAGEQI----QCFATKSGFDRFTVMGNSCVHMYARSGD 470
Query: 254 LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
++ A F+ ++ D VS++A+I+ +AQ+G A +AL F M+ + P++ T + V TA
Sbjct: 471 VDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTA 530
Query: 314 CSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAF--RQIHSPNL 370
CS L++EG + + + ++ G + C V+ + R G + D+E AF I +
Sbjct: 531 CSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAE-AFISNGIFHADP 589
Query: 371 VSWNTIIAAFAQHGHYEKA 389
V W +++A+ H E+
Sbjct: 590 VIWRSLLASCRIHRDLERG 608
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 115/227 (50%), Gaps = 5/227 (2%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
++F+ ++ +C++G AR L + + ++ VSFN +I Y++ G+A +L +
Sbjct: 42 SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARAR 101
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ + D + + ACS L GR H L I +G + V V N++++MYS+CG +
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMG 161
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
++ F + VSWN++++ + + G E+ + F+ M G + S++ C
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC- 220
Query: 417 HAGKVNESMDLFELM---VKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+G+ + +MD+ E + V G+ + ++D+ ++ G L +A
Sbjct: 221 -SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEA 266
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 5 SYFHQTYLKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQ-----YVFVNNAKISA 59
S FH++ L L P + I S ++C + + I+ F+T+ + + N+ +
Sbjct: 406 SLFHES-LGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHM 464
Query: 60 LSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----PVKNIVSW 115
+R+G + AA + F +M + DV++W+A+I+ + Q+G +++ + F M V N +++
Sbjct: 465 YARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITF 524
Query: 116 NCMIAGCIDNDRIDDAFDYFQAM 138
++ C +D+ Y++ M
Sbjct: 525 LGVLTACSHGGLVDEGLRYYETM 547
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 257/456 (56%), Gaps = 26/456 (5%)
Query: 126 DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
+ + +A F +P+ N +N +I + +G E A L+ QM + Y D F
Sbjct: 107 NSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQM-----LEYGLKPDNFT 161
Query: 186 KKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
+ ALS + G V +ER + ++++VFV A++
Sbjct: 162 LPFVLKACSALS------------TIGEGRVIHERVIRS--------GWERDVFVGAALV 201
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K G + +AR +F++I +D V +N+M+A YAQNG +E+L L M ++P +A
Sbjct: 202 DMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEA 261
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
TLV+V ++ + + L GR+ H R+GF+ N V A+I MY++CG + + + F ++
Sbjct: 262 TLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERL 321
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESM 425
+VSWN II +A HG +AL F +M + PD ITF+ L+AC ++E
Sbjct: 322 REKRVVSWNAIITGYAMHGLAVEALDLFERM-MKEAQPDHITFVGALAACSRGRLLDEGR 380
Query: 426 DLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVI 485
L+ LMV+ I P+ EHYTC+VD+L GQL++A+ + + M D+GVWG+LL +C
Sbjct: 381 ALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKT 440
Query: 486 NLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYS 545
+ NVEL E+A +K+ EL+P +S YV+L+N+YA +G W V R+R LM ++G+ K A S
Sbjct: 441 HGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACS 500
Query: 546 WIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
WIE+ NKV+ FL GD+SHP I+ ELKR M+
Sbjct: 501 WIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMR 536
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 146/271 (53%), Gaps = 3/271 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N+ + T ++ + L NA LF++I + +N +I YA NG E A+ L+ M+
Sbjct: 92 NLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQML 151
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ ++PD+ TL V ACSAL + EGR H VIR+G+E +V V A++ MY++CG ++
Sbjct: 152 EYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVV 211
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
D+ F +I + V WN+++AA+AQ+GH +++L +M G P T ++++S+
Sbjct: 212 DARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSA 271
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
+ ++ + +G + + T L+D+ ++ G ++ A + + + E W
Sbjct: 272 DIACLPHGREIHGFGWR-HGFQYNDKVKTALIDMYAKCGSVKVACVLFERLR-EKRVVSW 329
Query: 477 GSLLAACVIN-LNVELGELAAKKMRELDPQN 506
+++ ++ L VE +L + M+E P +
Sbjct: 330 NAIITGYAMHGLAVEALDLFERMMKEAQPDH 360
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 179/382 (46%), Gaps = 22/382 (5%)
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN---------CMI 119
A LFD++ ++ WN +I Y NG + + +L+ M + N C
Sbjct: 112 AHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSA 171
Query: 120 AGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
I R+ ++ ER+ A++ + K G + +A +F+++ R+ + + +
Sbjct: 172 LSTIGEGRVIHE-RVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNS 230
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGYVKNERFCEAREL--FYRMPD 233
ML + + G D++ +L M+ K V + +I+ RE+ F
Sbjct: 231 MLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHG 290
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ N V TA+I + K G ++ A +LFER++ K VS+NA+I GYA +G+A EAL LF
Sbjct: 291 FQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFE 350
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNAVITMYSRC 352
M+K + QPD T V ACS +LL+EGR + L++R+ V ++ + C
Sbjct: 351 RMMK-EAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHC 409
Query: 353 GGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI-TFLS 410
G + ++ RQ+ P+ W ++ + HG+ E A + + L +PD ++
Sbjct: 410 GQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEK--LIELEPDDSGNYVI 467
Query: 411 LLSACGHAGKVNESMDLFELMV 432
L + +GK L +LM+
Sbjct: 468 LANMYAQSGKWEGVARLRQLMI 489
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 137/324 (42%), Gaps = 61/324 (18%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A + ++ G + AR +FD++ +D + WN+++ Y QNG ES +L M
Sbjct: 194 VFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAA 253
Query: 110 K----------NIVSWNCMIAGCIDNDRIDDAFDY------------------------- 134
K ++S + IA C+ + R F +
Sbjct: 254 KGVRPTEATLVTVISSSADIA-CLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVK 312
Query: 135 -----FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR---NVISYTAMLDGFMK 186
F+ + E+ ++NA+I+G+ HG EA LFE+M + + I++ L +
Sbjct: 313 VACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEAQPDHITFVGALAACSR 372
Query: 187 KGEVDKARALSDYMSF-----KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVV 241
+D+ RAL + M V +T M+ + EA +L +M D + V
Sbjct: 373 GRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQM-DVMPDSGVW 431
Query: 242 TAMITGFCKVGMLENARLLFER---IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
A++ G +E A + E+ ++P D ++ + YAQ+G E RL MI
Sbjct: 432 GALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDK 491
Query: 299 DMQPDDATLVSVFTACSALQLLNE 322
++ + ACS +++ N+
Sbjct: 492 GIKKN--------IACSWIEVKNK 507
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
S+ +C + + L G+Q H + + G N+ + ++ YS C + ++ F +I
Sbjct: 63 SLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKG 122
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
NL WN +I A+A +G +E A+ + QM G PD T +L AC + E +
Sbjct: 123 NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIH 182
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
E +++ G LVD+ ++ G + A + + + D +W S+LAA N +
Sbjct: 183 ERVIRS-GWERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDAVLWNSMLAAYAQNGH 240
Query: 489 VELG-----ELAAKKMRELDPQNSAVYVMLSN 515
+ E+AAK +R P + + ++S+
Sbjct: 241 PDESLSLCCEMAAKGVR---PTEATLVTVISS 269
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/436 (36%), Positives = 245/436 (56%), Gaps = 16/436 (3%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNV--ISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
A+IS + K G +E+A ++FE+ P + + Y A++ G+ +V A + M
Sbjct: 89 TALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETG 148
Query: 205 VVSWTVMITGYVKNERFCEARELFY----------RMPDYDKNVFVVTAMITGFCKVGML 254
V +V I G V C E + + Y + V V+ + IT + K G +
Sbjct: 149 VSVDSVTILGLVP---LCTVPEYLWLGRSLHGECVKGGTYSE-VAVLNSFITMYMKCGSV 204
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E+ R LF+ + K +++NA+I+GY+QNG+A + L LF M + PD TLVSV ++C
Sbjct: 205 ESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSC 264
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+ L G++ LV NGF NV + NA+I+MY+RCG + + F + +LVSW
Sbjct: 265 AHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWT 324
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I + HG E L F M G PDG F+ +LSAC H+G ++ ++LF M +
Sbjct: 325 AMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 384
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
Y + P EHY+CLVD+L RAG+L++A + MP E D VWG+LL AC I+ NV++ EL
Sbjct: 385 YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAEL 444
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
A K+ E +P N YV++SN+Y+ + + R+R++M+E+ K+ YS++E KVH
Sbjct: 445 AFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVH 504
Query: 555 YFLGGDMSHPCIDKIH 570
FL GD SH +++H
Sbjct: 505 LFLAGDRSHEQTEEVH 520
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 149/289 (51%), Gaps = 9/289 (3%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDC---VSFNAMIAGYAQNGVAEEALRLFSGM 295
FV+TA+I+ +CK G++E+AR +FE P V +NA+I+GY N +A +F M
Sbjct: 86 FVLTALISMYCKCGLVEDARKVFEE-NPHSSQLGVCYNALISGYTANSKVSDAAFMFRRM 144
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ + D T++ + C+ + L GR H ++ G + V+V N+ ITMY +CG +
Sbjct: 145 KETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSV 204
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
F ++ L++WN +I+ ++Q+G L F QM +G PD T +S+LS+C
Sbjct: 205 ESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSC 264
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
H G ++ EL V+ G P+ L+ + +R G L KA + MP ++
Sbjct: 265 AHLGAKKIGQEVGEL-VEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVS- 322
Query: 476 WGSLLAACVINLNVELGELAAKKM--RELDPQNSAVYVMLSNLYAAAGM 522
W +++ ++ E G M R + P + AV+VM+ + + +G+
Sbjct: 323 WTAMIGCYGMHGMGETGLTLFDDMIKRGIRP-DGAVFVMVLSACSHSGL 370
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 211/480 (43%), Gaps = 69/480 (14%)
Query: 16 LFPPILRILSTPD---------SCGNFT-PHSSNCL----IRLFSTQYVFVNNAKISALS 61
L+ +LR S+PD SC + + P S L IR FV A IS
Sbjct: 37 LYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYC 96
Query: 62 RAGKISAARQLFDQ--MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
+ G + AR++F++ +++ + +NA+I+GY N + ++ +F+ M + + I
Sbjct: 97 KCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTI 156
Query: 120 AGCIDNDRIDDAF--------DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
G + + + + + A N+ I+ ++K G +E RLF++MP
Sbjct: 157 LGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPV 216
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
+ +I++ A++ G+ + G L + M V + + + A+++ +
Sbjct: 217 KGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEV 276
Query: 232 PD------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ + NVF+ A+I+ + + G L AR +F+ + K VS+ AMI Y +G+
Sbjct: 277 GELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMG 336
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
E L LF MIK ++PD A V V +ACS L ++G + F A
Sbjct: 337 ETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL--------FRA-------- 380
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ E P ++ ++ + G ++A+ F M + +PDG
Sbjct: 381 ----------MKREYKLE----PGPEHYSCLVDLLGRAGRLDEAMEFIDSMPV---EPDG 423
Query: 406 ITFLSLLSACGHAGKVNESMDLFEL-MVKVYGIIPSS-EHYTCLVDILSRAGQLEKAWQI 463
+ +LL AC K+++++D+ EL KV P + +Y + +I S + E W+I
Sbjct: 424 AVWGALLGAC----KIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRI 479
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+N + A + E++ L+ M++ PD + + +C++L L G+Q H V
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ-IHSPNL-VSWNTIIAAFAQHGHYEK 388
IR G EA V A+I+MY +CG + D+ F + HS L V +N +I+ + +
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSAC 415
A F +M G D +T L L+ C
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLC 163
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 295/599 (49%), Gaps = 49/599 (8%)
Query: 4 NSYFHQTYLKRILFPPILRILSTP-DSCGNFTPHSSNCLIRLFS--TQYVFVNNAKISAL 60
+S H +L+ + FPP +L T SC + + S + FV ++ + A
Sbjct: 4 SSSLHH-FLRHVSFPPDPHLLPTAFKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAY 62
Query: 61 SRAGKISAARQLFDQMT--TKDVITWNAIITGYWQNGFLQESKNLFQSMP-----VKNIV 113
R G AR LFD M + V+ W+A++ + G + + L + M N++
Sbjct: 63 LRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVI 122
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPE----RNTAT-YNAMISGFLKHGRLEEATRL--- 165
+WN +++G + R DA M R AT + +S G + +L
Sbjct: 123 TWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGY 182
Query: 166 -FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+ R + TA++D + K G+ + + D S +V S +I G +N + CEA
Sbjct: 183 AVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEA 242
Query: 225 RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
LF D + VV S+ +++A QNG
Sbjct: 243 LRLFKEFVDRGVELNVV-----------------------------SWTSIVACCVQNGK 273
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EA+ F M +P+ T+ V A + + L GR +H +R GF +V V +A
Sbjct: 274 DLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSA 333
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ MY++CG + D+ + F + S N+VSWN +I +A +G A+ F M PD
Sbjct: 334 LVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPD 393
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+TF LL+AC AG E F+ M YG+ P EHY C+V +L RAG+L++A+ +
Sbjct: 394 MVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLI 453
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
MPFE D +WGSLL +C ++ NV+L E+AA+K+ L+P+N+ YV+LSN+YA+ MW
Sbjct: 454 SDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWD 513
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
V RVR +MK+ G+ K+ SWIEI NKVH L GD SHP + I ++ + ++QM+ +
Sbjct: 514 RVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKL 572
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 281/534 (52%), Gaps = 42/534 (7%)
Query: 33 FTPHSSNCLIRLFSTQYVFV-NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGY 91
+PH N + ++T + FV +N +S L + IS +Q+ QM ++TG
Sbjct: 31 LSPHKENPIN--WNTNHSFVLSNPFLSLLEKCKSISQLKQIQSQM----------VLTGL 78
Query: 92 WQNGF----------------LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYF 135
++GF L N+ + N SWN I G +D++ +A +
Sbjct: 79 IEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLY 138
Query: 136 QAM-----PERNTATYNAMISGFLKHGRLEEATRLFEQMPR----RNVISYTAMLDGFMK 186
+ + + + TY + + + + + + ++ A++ +
Sbjct: 139 KRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVS 198
Query: 187 KGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
G++D AR + D +++VSW MI GY N AR+LF M + K + T M+
Sbjct: 199 CGDLDGARKMFDKSCVRDLVSWNSMINGYCGNLE--SARKLFDSMTN--KTMVSWTTMVV 254
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
G+ + G+L+ A LF+ + KD V +NAMI GY +EAL LF+ M M++ PD+ T
Sbjct: 255 GYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVT 314
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+VS +ACS L L+ G H + ++ NV++ A+I MY++CG I + F+++
Sbjct: 315 MVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELP 374
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
N ++W II+ A HG+ A+ +FS+M N PD +TFL LLSAC H G V E
Sbjct: 375 GRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRK 434
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
F M + + P +HY+C+VD+L RAG LE+A ++ + MP EAD VWG+L AC I+
Sbjct: 435 YFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIH 494
Query: 487 LNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTK 540
NV +GE AA K+ ++DP +S +YV+L+N+Y A MW++ + R LM+++GV K
Sbjct: 495 GNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEK 548
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 186/621 (29%), Positives = 316/621 (50%), Gaps = 85/621 (13%)
Query: 25 STPDSCGN------FTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTT 78
S DSCG+ HS I+ + FV + +R A +FD M
Sbjct: 56 SILDSCGSPILGKQLHAHS----IKSGFNAHEFVTTKLLQMYARNCSFENACHVFDTMPL 111
Query: 79 KDVITWNAIITGYWQNGFLQESKN-----LFQSMPVK-NIVSWNCMIAGCI--------- 123
+++ +W A++ Y + GF +E+ L++ + V+ + + ++ C
Sbjct: 112 RNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGR 171
Query: 124 ---------DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV 174
D D + AF+ F ++ A+YNAMI+G+ ++G L +A LF++M + V
Sbjct: 172 QMHGMALKHDGD-MKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGV 230
Query: 175 ----ISYTAMLDGFMKKGEVDKARAL-----------------------SDYMSFK---- 203
IS+ +M+ G++ D+A +L +D S +
Sbjct: 231 QKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKE 290
Query: 204 ------------NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
N + ++ Y K + A+ F + + D + A+I+G+ +
Sbjct: 291 AHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTW--NALISGYARC 348
Query: 252 GMLENARLLFERIQ----PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
E R L ++++ + ++N +IAGY +N + A++LF+ M +++PD T+
Sbjct: 349 NQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTV 408
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
+ ACS L + G+Q H IR G +++V + A++ MY++CG + + I +
Sbjct: 409 GIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISN 468
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
PNLVS N ++ A+A HGH E+ + F +M + PD +TFL++LS+C HAG + +
Sbjct: 469 PNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHEC 528
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
LMV Y ++PS +HYTC+VD+LSRAGQL +A+++ + +P EAD W +LL C I+
Sbjct: 529 LALMV-AYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHN 587
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
V+LGE+AA+K+ EL+P N YVML+NLYA+AG W +T+ R LMK+ G+ K+ SWI
Sbjct: 588 EVDLGEIAAEKLIELEPNNPGNYVMLANLYASAGKWHYLTQTRQLMKDMGMQKRPGCSWI 647
Query: 548 EIGNKVHYFLGGDMSHPCIDK 568
E + +H F+ D+ H K
Sbjct: 648 EDRDGIHVFVAKDIYHTSTSK 668
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/523 (34%), Positives = 280/523 (53%), Gaps = 33/523 (6%)
Query: 58 SALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNC 117
S+++ +G ++ A QLF +T D WN +I G Q+ P+ I ++
Sbjct: 55 SSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQS-----------PSPLNAISLYSQ 103
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
M GC+ D+ F + + + M GF HGR+ R +I +
Sbjct: 104 MENGCVRPDK----FTFPFVLKACTRLCWVKM--GFGVHGRVFRLGFESNTFVRNTLIYF 157
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
A G++ ARAL D + ++VV+W+ + GY + AR+LF MP K+
Sbjct: 158 HA------NCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPV--KD 209
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ MITG+ K G +E+AR LF+ + +D V++NAMIAGY G ++AL +F M
Sbjct: 210 LVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRS 269
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF-EANVSVCNAVITMYSRCGGIL 356
+ PD+ T++S+ +AC+ L L+ G++ H + GF + +V + NA+I MY++CG I+
Sbjct: 270 VGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIV 329
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+ F+ + ++ +WN+++ A HGH EK++ F++M PD ITF+ +L AC
Sbjct: 330 RALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACS 389
Query: 417 HAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVW 476
HAG+V E F+LM Y I P+ HY C+VD+L RAG L +A+ M E + VW
Sbjct: 390 HAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVW 449
Query: 477 GSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
+LL AC I+ NVELG A ++ ++ S YV+LSN+YA+ G W V +VR LM +
Sbjct: 450 RTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDS 509
Query: 537 GVTKQCAYSWIEIGNK--VHYFLGGDMSHPCID--KIHLELKR 575
GV K+ S IE NK +H+ S P ++ K LEL R
Sbjct: 510 GVRKEAGCSLIEGDNKALMHFLFD---SKPKLNSRKPFLELHR 549
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 181/352 (51%), Gaps = 32/352 (9%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+ RL FV N I + G ++ AR LFD +DV+ W+A+ GY + G L +
Sbjct: 139 VFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVA 198
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
+ LF MPVK++VSWN MI G ++ A F +P+R+ T+NAMI+G++ G +
Sbjct: 199 RQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQ 258
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
+A +FE+M R+V GE L D ++ +++S + +R
Sbjct: 259 QALEMFEEM--RSV-------------GE------LPDEVTMLSLLSACTDLGDLDAGQR 297
Query: 221 F-CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
C E+ +R D +V + A+I + K G + A +F+ ++ KD ++N+++ G
Sbjct: 298 IHCCISEMGFR----DLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGL 353
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGF--EA 337
A +G AE+++ LF+ M K+ ++PD+ T V V ACS + EGRQ + ++R+ + E
Sbjct: 354 AFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQ-YFDLMRDEYNIEP 412
Query: 338 NVSVCNAVITMYSRCGGILDSELAFRQIH--SPNLVSWNTIIAAFAQHGHYE 387
N+ ++ + R G+L+ F PN + W T++ A HG+ E
Sbjct: 413 NIRHYGCMVDLLGR-AGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVE 463
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/586 (30%), Positives = 288/586 (49%), Gaps = 44/586 (7%)
Query: 11 YLKRILFPPILRIL-STPDSCGNFTPHSSNCLIRLFS--TQYVFVNNAKISALSRAGKIS 67
+L+ + FPP R+L S SC + + ++ FV ++ + A R G +
Sbjct: 13 FLRHVSFPPDPRLLPSALKSCSALRLARALHAAAAVAGVSRDAFVASSLLHAYLRFGATA 72
Query: 68 AARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK----NIVSWNCMIAGCI 123
AR + D M + V+ W+A+I + +G + + L + M N+++WN +++G
Sbjct: 73 DARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLN 132
Query: 124 DNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEEATRLF----EQMPRRNVI 175
+ R DA M + + +S G + +L + R +
Sbjct: 133 RSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDAC 192
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
TA++D + K G D+ + D S +V S ++ G +N + EA LF
Sbjct: 193 VATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLF------- 245
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
R R + VS+ +++A QNG EA+ LF M
Sbjct: 246 ----------------------REFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREM 283
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++P+ T+ V A + + L GR +H +R GF ++ V +A++ MY++CG +
Sbjct: 284 QSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRV 343
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
D+ + F + N+VSWN +I +A HG E A+ F M + PD +TF +L AC
Sbjct: 344 RDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGAC 403
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
AG E F M +GI P EHY C+V +L RAG+L+ A+ I MPFE D +
Sbjct: 404 SQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCI 463
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WGSLL +C ++ NV L E+AA+ + +L+P+N+ YV+LSN+YA+ MW V R+R +MK
Sbjct: 464 WGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKT 523
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
G+ K+ SWIEI NKVH L GD SHP + I +LK +++M+
Sbjct: 524 VGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMR 569
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/484 (32%), Positives = 263/484 (54%), Gaps = 44/484 (9%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----N 173
M C++ +D+A F+++P ++N +I+GF + G +A + M N
Sbjct: 1 MYTKCVE---MDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPN 57
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-- 231
++Y+ +L +K +V ARA+ D +S +V +W +++GY + E+ + ELF RM
Sbjct: 58 EVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQH 117
Query: 232 ----PD-------------------------------YDKNVFVVTAMITGFCKVGMLEN 256
PD ++FV + ++ + K G +
Sbjct: 118 QNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGI 177
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR +F ++ +D V +N++I+G + + +EA F M + + P +++ S+ +CS
Sbjct: 178 ARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSR 237
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L + GRQ H V+++G++ NV V +A+I MY++CG + D+ L F + N+V+WN +
Sbjct: 238 LSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEM 297
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
I +AQ+G +KA+ F M PD +TF+++L+ C H+G V+++M F M YG
Sbjct: 298 IHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYG 357
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAA 496
IIP +EHYTCL+D L RAG+ + + MP + D +W LLAACV++ N ELG+ AA
Sbjct: 358 IIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAA 417
Query: 497 KKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYF 556
+ + +DP+N + YV+LSN+YA+ G D + VR LM +GV K YSWI+ + V F
Sbjct: 418 EHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAF 477
Query: 557 LGGD 560
+ D
Sbjct: 478 MVAD 481
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 132/315 (41%), Gaps = 56/315 (17%)
Query: 23 ILSTPDSCG--NFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKD 80
ILS+ G +F + +R +FV + + S+ G+I AR +F++MT +D
Sbjct: 130 ILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERD 189
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIV----SWNCMIAGC-----IDNDR---- 127
V+ WN+II+G + +E+ + F+ M I+ S+ MI C I + R
Sbjct: 190 VVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHA 249
Query: 128 --------------------------IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+DDA +F M +N +N MI G+ ++G ++
Sbjct: 250 QVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDK 309
Query: 162 ATRLFEQM----PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVV-----SWTVMI 212
A LFE M + + +++ A+L G G VDKA A + M + +T +I
Sbjct: 310 AVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLI 369
Query: 213 TGYVKNERFCEARELFYRMPDYDK----NVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
+ RF E L ++MP D V + ++ ++G L RI PK+
Sbjct: 370 DALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLF--RIDPKN 427
Query: 269 CVSFNAMIAGYAQNG 283
+ + YA G
Sbjct: 428 PSPYVLLSNIYASLG 442
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 53/285 (18%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN---------I 112
+A + +AR +FD+++ V TWN +++GY Q Q++ LF+ M +N +
Sbjct: 70 KARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAV 129
Query: 113 VSWNCMIAGCID---------------ND---------------RIDDAFDYFQAMPERN 142
+ +C G +D ND +I A F M ER+
Sbjct: 130 ILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERD 189
Query: 143 TATYNAMISGFLKHGRLEEATRLFEQMPRRNVI----SYTAMLDGFMKKGEVDKARALSD 198
+N++ISG H +EA F+QM ++ SY +M++ + + R +
Sbjct: 190 VVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHA 249
Query: 199 YMSF----KNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
+ +NV + +I Y K +AR F M KN+ MI G+ + G+
Sbjct: 250 QVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTM--MMKNIVAWNEMIHGYAQNGLG 307
Query: 255 ENARLLFERI----QPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ A LFE + Q D V+F A++ G + +G+ ++A+ F+ M
Sbjct: 308 DKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSM 352
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 183/610 (30%), Positives = 296/610 (48%), Gaps = 97/610 (15%)
Query: 12 LKRILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQ 71
L +F IL++L + D CG C+ +L FV A I A S G++ AR+
Sbjct: 137 LNPFVFTTILKLLVSMD-CGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVARE 195
Query: 72 LFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDA 131
+FD + KD+++W ++T + +N +E+ LF M + N A +A
Sbjct: 196 VFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEA 255
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
FD ++ + G R E ++ A+LD + K G++D
Sbjct: 256 FDVGKS------------VHGCALKSRYE-----------LDLYVGVALLDLYTKSGDID 292
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------ 233
AR + + K+V+ W+ MI Y ++++ EA E+F++M P+
Sbjct: 293 DARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACA 352
Query: 234 -------------------YDKNVFVVTAMITGFCKVGMLENARLLF-ERIQPKDCVSFN 273
+VFV A++ + K G +EN+ LF E D +N
Sbjct: 353 TMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWN 412
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
+I G+ Q G E+ALRLF M++ +Q + T S AC++L L G Q H L ++
Sbjct: 413 TVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKT 472
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
F+ ++ V NA+I MY++CG I D+ L F ++ + VSWN +I+ ++ HG
Sbjct: 473 TFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG--------- 523
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
AC +AG +++ F M++ +GI P EHYTC+V +L R
Sbjct: 524 -------------------LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGR 564
Query: 454 AGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVML 513
G L+KA ++ +PF+ VW +LL ACVI+ ++ELG ++A+ + E++PQ+ A +V+L
Sbjct: 565 GGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLL 624
Query: 514 SNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP-------CI 566
SN+YA A W +V VR MK +GV K+ SWIE VH F GD SHP +
Sbjct: 625 SNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGML 684
Query: 567 DKIHLELKRA 576
+ +H++ K+A
Sbjct: 685 EWLHMKTKKA 694
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 205/430 (47%), Gaps = 53/430 (12%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ WN ++ Y ++ FL ++ LF MP +N +S+ +I G ++ R +A + F +
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 140 ERNTATYNAMISGFLKH------GRLEEATR--LFEQMPRRNVISYTAMLDGFMKKGEVD 191
+ + LK G L +F+ N TA++D + G VD
Sbjct: 132 REGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVD 191
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------ 233
AR + D + +K++VSWT M+T + +N+ F EA +LF +M P+
Sbjct: 192 VAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACL 251
Query: 234 -------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
Y+ +++V A++ + K G +++AR FE I KD + ++
Sbjct: 252 GLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSF 311
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
MIA YAQ+ ++EA+ +F M + + P+ T SV AC+ ++ LN G Q H VI+ G
Sbjct: 312 MIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIG 371
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQ-IHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
++V V NA++ +Y++CG + +S F + H ++ WNT+I Q G EKAL F
Sbjct: 372 LHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLF 431
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY---GIIPSSEHYTCLVDI 450
M +T+ S L AC + + + L VK I+ ++ L+D+
Sbjct: 432 LNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTN----ALIDM 487
Query: 451 LSRAGQLEKA 460
++ G ++ A
Sbjct: 488 YAKCGSIKDA 497
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAF 380
+ G+ H +++ G ++ N ++ MY + + D+ F ++ N +S+ T+I +
Sbjct: 55 SRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGY 114
Query: 381 AQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPS 440
A+ + +A+ F ++ G + + F ++L K+ SMD EL ++ I
Sbjct: 115 AESVRFLEAIELFVRLHREGHELNPFVFTTIL-------KLLVSMDCGELGWGIHACIFK 167
Query: 441 SEHY------TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
H T L+D S G+++ A ++ G+ ++ D W ++
Sbjct: 168 LGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYK-DMVSWTGMV 212
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 286/536 (53%), Gaps = 28/536 (5%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQ-------------ESKNLFQSMPVKN 111
++ AR++FD + + D + WN ++ G + ++ ++ L +P
Sbjct: 164 RVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCDGSVRPDATTLASVLPAAA 223
Query: 112 IVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
V+ + + C+ + F + E +IS + K G +E A LF+ M +
Sbjct: 224 EVA-DVTMGRCVHS------FAEKCGLAEHEH-VLTGLISLYSKCGDVESARCLFDMMEK 275
Query: 172 RNVISYTAMLDGFMKKGEVDKARAL-SDYMSF---KNVVSWTVMITGYVK--NERFCEAR 225
++++Y A++ G+ G V + L ++ M+ N + +I + ++ +
Sbjct: 276 PDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCL 335
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
F + N V TA+ T C++ +E+AR F+ + K S+NAMI+GYAQNG+
Sbjct: 336 HGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLT 395
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
E A+ LF M+K++++P+ T+ S +AC+ L L+ G+ H ++ E NV V A+
Sbjct: 396 EMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTAL 455
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I MY++CG I ++ F + + N+VSWN +IA + HG +AL + M P
Sbjct: 456 IDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTS 515
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
TFLS+L AC H G V E +F M Y I P EH TC+VD+L RAGQL++A+++
Sbjct: 516 ATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELIS 575
Query: 466 GMPFEA-DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
P A GVWG+LL AC+++ + +L +LA++K+ ELDP+NS YV+LSNL+ + +
Sbjct: 576 EFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYS 635
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQM 580
+ VR K + + K Y+ IEIGNK H F+ GD +HP + I+ L++ + +M
Sbjct: 636 EAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKM 691
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 169/424 (39%), Gaps = 101/424 (23%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
++ V IS S+ G + +AR LFD M D++ +NA+I+GY NG + S NLF +
Sbjct: 245 EHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTEL 304
Query: 108 ----------------PVKNIVSWNCMIAGCIDN------------------------DR 127
PV + + ++A C+ +
Sbjct: 305 MTLGLWPNSSTLVALIPVHSPFGHD-LLAQCLHGFVLKSGFTANSPVSTAITTLHCRLND 363
Query: 128 IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDG 183
++ A F MPE+ ++NAMISG+ ++G E A LFEQM + NV I+ ++ L
Sbjct: 364 MESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSA 423
Query: 184 FMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVF 239
+ G + + L ++ + NV T +I Y K EAR +F M +KNV
Sbjct: 424 CAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMD--NKNVV 481
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
AMI AGY +G EAL+L+ M+
Sbjct: 482 SWNAMI-------------------------------AGYGLHGQGAEALKLYKDMLDAH 510
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-----GFEANVSVCNAVITMYSRCGG 354
+ P AT +SV ACS L+ EG + V R+ + C ++ + R G
Sbjct: 511 LLPTSATFLSVLYACSHGGLVEEGWK----VFRSMTDDYAINPGIEHCTCMVDLLGRAGQ 566
Query: 355 I-----LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
+ L SE + P + W ++ A H + L + L DP+ +
Sbjct: 567 LKEAFELISEFPKSAV-GPGV--WGALLGACMVHK--DSDLAKLASQKLFELDPENSGYY 621
Query: 410 SLLS 413
LLS
Sbjct: 622 VLLS 625
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 131/276 (47%), Gaps = 7/276 (2%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+ FV +A+ + + +++AR +F+ + D V +N ++AG + EA+ F+ M+
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARMV 203
Query: 297 -KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
++PD TL SV A + + + GR H + G + V +I++YS+CG +
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ F + P+LV++N +I+ ++ +G ++ F+++ G P+ T ++L+
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
G + L ++K G +S T + + R +E A + MP E
Sbjct: 324 SPFGHDLLAQCLHGFVLK-SGFTANSPVSTAITTLHCRLNDMESARKAFDTMP-EKTMES 381
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
W ++++ N E+ ++M +L+ + + + +
Sbjct: 382 WNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITI 417
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/495 (33%), Positives = 269/495 (54%), Gaps = 12/495 (2%)
Query: 103 LFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL-KHGRLEE 161
LF+ P ++ N +I G ++DR D+ F M + + ++ F+ K
Sbjct: 61 LFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLR 120
Query: 162 ATRLFEQMPRRNVISY--------TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
+ R+ Q+ + ++ T ++ + + G V AR + D M N ++W M+T
Sbjct: 121 SVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVT 180
Query: 214 GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+ RELF MP +N+ M+ G+ K G LE AR +F + KD VS++
Sbjct: 181 ACCRGGDMKGGRELFDLMPV--RNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWS 238
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN 333
MI G+A NG EEA F + + M+P++ +L V +AC+ L G+ H + ++
Sbjct: 239 TMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKS 298
Query: 334 GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALIF 392
G VSV NA++ YS+CG +L ++L F +I + N+VSW +++AA A HGH E+A+
Sbjct: 299 GLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGI 358
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F +M +G PD I F+SLL AC HAG V + + F+ M +Y I PS EHY C+VD+
Sbjct: 359 FHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYG 418
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
RAGQL+KA++ MP +W +LL AC ++ +V+L E +++ ELDP NS+ +V+
Sbjct: 419 RAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVL 478
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
LSN YA AG W+D VR M EQ +TK +S IE+ ++ FL G + ++ + +
Sbjct: 479 LSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKK 538
Query: 573 LKRASVQMKSVDDFV 587
LK +++ +V
Sbjct: 539 LKEIIRRLRVEGGYV 553
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 184/381 (48%), Gaps = 41/381 (10%)
Query: 49 YVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP 108
++FV IS G + AR++FD+M + I WNA++T + G ++ + LF MP
Sbjct: 140 HLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMP 199
Query: 109 VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQ 168
V+N++SWN M+AG ++ A + F MP ++ +++ MI GF +G EEA F +
Sbjct: 200 VRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRE 259
Query: 169 MPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+ R+ N S T +L + G ++ + L ++ K+ ++W V +
Sbjct: 260 LQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIE-KSGLAWIVSVN----------- 307
Query: 225 RELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERI-QPKDCVSFNAMIAGYAQNG 283
A++ + K G + A+L+FERI ++ VS+ +M+A A +G
Sbjct: 308 -----------------NALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHG 350
Query: 284 VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ--SHVLVIRNGFEANVSV 341
EEA+ +F M + ++PD+ +S+ ACS L+ +G + + + N E ++
Sbjct: 351 HGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYN-IEPSIEH 409
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
++ +Y R G + + Q+ P + W T++ A + HG + A + L+
Sbjct: 410 YGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKER--LSE 467
Query: 401 FDPDGITFLSLLS-ACGHAGK 420
DP+ + LLS A AGK
Sbjct: 468 LDPNNSSDHVLLSNAYAVAGK 488
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,028,823,054
Number of Sequences: 23463169
Number of extensions: 355633929
Number of successful extensions: 1232528
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9207
Number of HSP's successfully gapped in prelim test: 2910
Number of HSP's that attempted gapping in prelim test: 971267
Number of HSP's gapped (non-prelim): 68601
length of query: 597
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 449
effective length of database: 8,886,646,355
effective search space: 3990104213395
effective search space used: 3990104213395
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)