BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007573
(597 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/528 (39%), Positives = 338/528 (64%), Gaps = 2/528 (0%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N +S ++ G + AR +FD+M K+ ++WNA+++ Y QN ++E+ LF+S +V
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV 220
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SWNC++ G + +I +A +F +M R+ ++N +I+G+ + G+++EA +LF++ P ++
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD 233
V ++TAM+ G+++ V++AR L D M +N VSW M+ GYV+ ER A+ELF MP
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPC 340
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+NV MITG+ + G + A+ LF+++ +D VS+ AMIAGY+Q+G + EALRLF
Sbjct: 341 --RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M + + + ++ S + C+ + L G+Q H +++ G+E V NA++ MY +CG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ F+++ ++VSWNT+IA +++HG E AL FF M G PD T +++LS
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H G V++ F M + YG++P+S+HY C+VD+L RAG LE A + + MPFE D
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+WG+LL A ++ N EL E AA K+ ++P+NS +YV+LSNLYA++G W DV ++R+ M
Sbjct: 579 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRM 638
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+++GV K YSWIEI NK H F GD HP D+I L+ ++MK
Sbjct: 639 RDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMK 686
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 229/475 (48%), Gaps = 59/475 (12%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D+ WN I+ Y + G E+ +F+ MP + VS+N MI+G + N + A F MP
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
ER+ ++N MI G++++ L +A LFE MP R+V S+ ML G+ + G VD AR++ D
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------------------------ 235
M KN VSW +++ YV+N + EA LF ++
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 236 -----KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
++V +ITG+ + G ++ AR LF+ +D ++ AM++GY QN + EEA
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
LF M + + +A L + +++ E V+ R NVS N +IT Y+
Sbjct: 303 LFDKMPERNEVSWNAMLAG-YVQGERMEMAKE--LFDVMPCR-----NVSTWNTMITGYA 354
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG I +++ F ++ + VSW +IA ++Q GH +AL F QM G + +F S
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT-CLVD-----ILSRAGQLEKAWQIT 464
LS C + EL +++G + + T C V + + G +E+A +
Sbjct: 415 ALSTCA-------DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAK-----KMRELDPQNSAVYVMLS 514
+ M + D W +++A + GE+A + K L P ++ + +LS
Sbjct: 468 KEMAGK-DIVSWNTMIAGYSRH---GFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 178 bits (452), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 181/346 (52%), Gaps = 31/346 (8%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q VF A +S + + AR+LFD+M ++ ++WNA++ GY Q ++ +K LF M
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFE 167
P +N+ +WN MI G +I +A + F MP+R+ ++ AMI+G+ + G EA RLF
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
QM R + G ++++ S + +VV+ + ++L
Sbjct: 399 QMER--------------EGGRLNRSSFSSALSTCADVVALEL-------------GKQL 431
Query: 228 FYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
R+ Y+ FV A++ +CK G +E A LF+ + KD VS+N MIAGY+++G
Sbjct: 432 HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFG 491
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRN-GFEANVSVCNA 344
E ALR F M + ++PDDAT+V+V +ACS L+++GRQ + ++ G N
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 345 VITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKA 389
++ + R G + D+ + + P+ W T++ A HG+ E A
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 122/267 (45%), Gaps = 18/267 (6%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D ++ I+ + + G A +F+R+ VS+N MI+GY +NG E A +LF
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 295 MIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
M + D+ + + ++ N G+ + I E +V N +++ Y++ G
Sbjct: 121 MPERDLVSWNVMIKGY------VRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNGC 172
Query: 355 ILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
+ D+ F ++ N VSWN +++A+ Q+ E+A + F +++ LL
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGG 228
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
K+ E+ F+ M V ++ + ++ +++G++++A Q+ P + D
Sbjct: 229 FVKKKKIVEARQFFDSM-NVRDVVS----WNTIITGYAQSGKIDEARQLFDESPVQ-DVF 282
Query: 475 VWGSLLAACVINLNVELGELAAKKMRE 501
W ++++ + N VE KM E
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPE 309
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/536 (38%), Positives = 325/536 (60%), Gaps = 4/536 (0%)
Query: 31 GNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITG 90
N P + L + + N +S + G+I AR++FD M ++V++W A++ G
Sbjct: 60 ANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKG 119
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI 150
Y NG + +++LF MP KN VSW M+ G + + RIDDA ++ +P+++ +MI
Sbjct: 120 YVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMI 179
Query: 151 SGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
G K GR++EA +F++M R+VI++T M+ G+ + VD AR + D M K VSWT
Sbjct: 180 HGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTS 239
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
M+ GYV+N R +A ELF MP K V AMI+G + G + AR +F+ ++ ++
Sbjct: 240 MLMGYVQNGRIEDAEELFEVMPV--KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+ +I + +NG EAL LF M K ++P TL+S+ + C++L L+ G+Q H +
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
+R F+ +V V + ++TMY +CG ++ S+L F + S +++ WN+II+ +A HG E+AL
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 391 IFFSQMGLNG-FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
F +M L+G P+ +TF++ LSAC +AG V E + ++E M V+G+ P + HY C+VD
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVD 477
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L RAG+ +A ++ M E D VWGSLL AC + +++ E AKK+ E++P+NS
Sbjct: 478 MLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGT 537
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL-GGDMSHP 564
Y++LSN+YA+ G W DV +R LMK + V K SW E+ NKVH F GG SHP
Sbjct: 538 YILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHP 593
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 209/416 (50%), Gaps = 32/416 (7%)
Query: 77 TTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQ 136
TT T N IT + G + E++ LF S K+I SWN M+AG N DA F
Sbjct: 13 TTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFD 72
Query: 137 AMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL 196
MP+RN ++N ++SG++K+G ++EA ++F+ MP RNV+S+TA++ G++ G+VD A +L
Sbjct: 73 EMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
M KN VSWTVM+ G++++ R +A +L+ +PD D T+MI G CK G ++
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDN--IARTSMIHGLCKEGRVDE 190
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA 316
AR +F+ + + +++ M+ GY QN ++A ++F D+ P+ V
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEK---TEVSWTSML 241
Query: 317 LQLLNEGRQSHVLVIRNGFEA----NVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
+ + GR + FE V CNA+I+ + G I + F + N S
Sbjct: 242 MGYVQNGRIEDAEEL---FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDAS 298
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG------HAGKVNESMD 426
W T+I ++G +AL F M G P T +S+LS C H +V+ +
Sbjct: 299 WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ V VY + L+ + + G+L K+ I P D +W S+++
Sbjct: 359 RCQFDVDVYVA-------SVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISG 406
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/570 (37%), Positives = 327/570 (57%), Gaps = 61/570 (10%)
Query: 56 KISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
+IS LSR GKI+ AR+ FD + K + +WN+I++GY+ NG +E++ LF M +N+VSW
Sbjct: 23 EISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSW 82
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
N +++G I N I +A + F+ MPERN ++ AM+ G+++ G + EA LF +MP RN +
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFK-------------------------------N 204
S+T M G + G +DKAR L D M K N
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 205 VVSWTVMITGYVKNERFCEARELFYRMPDYD----------------------------- 235
VV+WT MITGY +N R AR+LF MP+
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
K V AMI GF +VG + AR +F+ ++ +D ++ MI Y + G EAL LF+ M
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
K ++P +L+S+ + C+ L L GRQ H ++R F+ +V V + ++TMY +CG +
Sbjct: 323 QKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ ++L F + S +++ WN+II+ +A HG E+AL F +M +G P+ +T +++L+AC
Sbjct: 383 VKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTAC 442
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+AGK+ E +++FE M + + P+ EHY+C VD+L RAGQ++KA ++ + M + D V
Sbjct: 443 SYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV 502
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WG+LL AC + ++L E+AAKK+ E +P N+ YV+LS++ A+ W DV VR M+
Sbjct: 503 WGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRT 562
Query: 536 QGVTKQCAYSWIEIGNKVHYFL-GGDMSHP 564
V+K SWIE+G KVH F GG +HP
Sbjct: 563 NNVSKFPGCSWIEVGKKVHMFTRGGIKNHP 592
Score = 35.8 bits (81), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 329 LVIRNGFEANVSV-CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
L++R + + V C+ I+ SR G I ++ F + + SWN+I++ + +G +
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPK 65
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+A F +M + + +++ L+S + E+ ++FELM
Sbjct: 66 EARQLFDEMS----ERNVVSWNGLVSGYIKNRMIVEARNVFELM 105
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/541 (38%), Positives = 333/541 (61%), Gaps = 9/541 (1%)
Query: 57 ISALSRAGKISAARQLFDQMTT-KDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSW 115
I+ + G + AR+LFD++ + K+V+TW A+++GY ++ L ++ LFQ MP +N+VSW
Sbjct: 84 ITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSW 143
Query: 116 NCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI 175
N MI G + RID A + F MPERN ++N+M+ ++ GR++EA LFE+MPRR+V+
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD 235
S+TAM+DG K G+VD+AR L D M +N++SW MITGY +N R EA +LF MP+ D
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ MITGF + + A LF+R+ K+ +S+ MI GY +N EEAL +FS M
Sbjct: 264 FASW--NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM 321
Query: 296 IK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGG 354
++ ++P+ T VS+ +ACS L L EG+Q H L+ ++ + N V +A++ MYS+ G
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 355 ILDSELAFRQ--IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
++ + F + +L+SWN++IA +A HGH ++A+ ++QM +GF P +T+L+LL
Sbjct: 382 LIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLL 441
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC HAG V + M+ F+ +V+ + EHYTCLVD+ RAG+L+
Sbjct: 442 FACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLS 501
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLL 532
+G++L+AC ++ V + + KK+ E ++ YV++SN+YAA G + +R+
Sbjct: 502 RSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMK 561
Query: 533 MKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP---CIDKIHLELKRASVQMKSVDDFVEI 589
MKE+G+ KQ SW+++G + H F+ GD SHP +D I +L+ + K+V E
Sbjct: 562 MKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNVTSDAEE 621
Query: 590 A 590
A
Sbjct: 622 A 622
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 175/310 (56%), Gaps = 40/310 (12%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N I +++G+I A +LFD+M +++++WN+++ Q G + E+ NLF+ MP +++V
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
SW M+ G N ++D+A F MPERN ++NAMI+G+ ++ R++EA +LF+ MP R+
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 174 VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-- 231
S+ M+ GF++ E++KA L D M KNV+SWT MITGYV+N+ EA +F +M
Sbjct: 264 FASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLR 323
Query: 232 -----PD-------------------------------YDKNVFVVTAMITGFCKVGMLE 255
P+ + KN V +A++ + K G L
Sbjct: 324 DGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELI 383
Query: 256 NARLLFER--IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTA 313
AR +F+ + +D +S+N+MIA YA +G +EA+ +++ M K +P T +++ A
Sbjct: 384 AARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFA 443
Query: 314 CSALQLLNEG 323
CS L+ +G
Sbjct: 444 CSHAGLVEKG 453
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 216/428 (50%), Gaps = 35/428 (8%)
Query: 124 DNDRIDDAFDYFQAMPERNTATY----NAMISGFLKHGRLEEATRLFEQMPRRNVISYTA 179
DNDR F+ +++ ++ +I K G++ EA +LF+ +P R+V+++T
Sbjct: 23 DNDRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTH 82
Query: 180 MLDGFMKKGEVDKARALSDYM-SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV 238
++ G++K G++ +AR L D + S KNVV+WT M++GY+++++ A LF MP ++NV
Sbjct: 83 VITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP--ERNV 140
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
MI G+ + G ++ A LF+ + ++ VS+N+M+ Q G +EA+ LF M +
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR 200
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
D+ + ++ + ++E R+ + E N+ NA+IT Y++ I ++
Sbjct: 201 DV----VSWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEA 252
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
+ F+ + + SWNT+I F ++ KA F +M + + I++ ++++
Sbjct: 253 DQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP----EKNVISWTTMITGYVEN 308
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ E++++F M++ + P+ Y ++ S L + QI Q +
Sbjct: 309 KENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQK--NE 366
Query: 479 LLAACVINLNVELGEL-AAKKM--------RELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
++ + ++N+ + GEL AA+KM R+L NS + V YA G ++ +
Sbjct: 367 IVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAV-----YAHHGHGKEAIEM 421
Query: 530 RLLMKEQG 537
M++ G
Sbjct: 422 YNQMRKHG 429
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/492 (39%), Positives = 299/492 (60%), Gaps = 4/492 (0%)
Query: 81 VITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG-CIDNDRIDDAFDYFQAMP 139
+ N II ++G + + +F M KN ++WN ++ G D R+ +A F +P
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E +T +YN M+S ++++ E+A F++MP ++ S+ M+ G+ ++GE++KAR L
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
M KN VSW MI+GY++ +A F P + V TAMITG+ K +E A
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPV--RGVVAWTAMITGYMKAKKVELAEA 238
Query: 260 LFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F+ + K+ V++NAMI+GY +N E+ L+LF M++ ++P+ + L S CS L
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L GRQ H +V ++ +V+ ++I+MY +CG + D+ F + ++V+WN +I+
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
+AQHG+ +KAL F +M N PD ITF+++L AC HAG VN M FE MV+ Y +
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 439 PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKK 498
P +HYTC+VD+L RAG+LE+A ++ + MPF V+G+LL AC ++ NVEL E AA+K
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 478
Query: 499 MRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLG 558
+ +L+ QN+A YV L+N+YA+ W DV RVR MKE V K YSWIEI NKVH+F
Sbjct: 479 LLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRS 538
Query: 559 GDMSHPCIDKIH 570
D HP +D IH
Sbjct: 539 SDRIHPELDSIH 550
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/632 (34%), Positives = 340/632 (53%), Gaps = 88/632 (13%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
FS + +F+ N I A S+ G + RQ+FD+M +++ TWN+++TG + GFL E+ +LF
Sbjct: 51 FSNE-IFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLF 109
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATY-------------- 146
+SMP ++ +WN M++G +DR ++A YF M + N ++
Sbjct: 110 RSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMN 169
Query: 147 ---------------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFM 185
+A++ + K G + +A R+F++M RNV+S+ +++ F
Sbjct: 170 KGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFE 229
Query: 186 KKGEVDKA----------RALSDYMSFKNVVSWTVMITG--------------------- 214
+ G +A R D ++ +V+S ++
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 215 ---------YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
Y K R EAR +F MP +NV T+MI+G+ + ARL+F ++
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPI--RNVIAETSMISGYAMAASTKAARLMFTKMA 347
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
++ VS+NA+IAGY QNG EEAL LF + + + P + ++ AC+ L L+ G Q
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQ 407
Query: 326 SHVLVIRNGF------EANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
+HV V+++GF E ++ V N++I MY +CG + + L FR++ + VSWN +I
Sbjct: 408 AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIG 467
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
FAQ+G+ +AL F +M +G PD IT + +LSACGHAG V E F M + +G+ P
Sbjct: 468 FAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAP 527
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HYTC+VD+L RAG LE+A + + MP + D+ +WGSLLAAC ++ N+ LG+ A+K+
Sbjct: 528 LRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKL 587
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGG 559
E++P NS YV+LSN+YA G W DV VR M+++GVTKQ SWI+I H F+
Sbjct: 588 LEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVK 647
Query: 560 DMSHPCIDKIHLELKRASVQMKSVDDFVEIAT 591
D SHP +IH L +M+ D EI +
Sbjct: 648 DKSHPRKKQIHSLLDILIAEMRPEQDHTEIGS 679
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF-----RQIHSPNLV------- 371
R H VI++GF + + N +I YS+CG + D F R I++ N V
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 372 -------------------SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
+WN++++ FAQH E+AL +F+ M GF + +F S+L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHY--TCLVDILSRAGQLEKAWQITQGMPFE 470
SAC +N+ + + L+ K + S+ Y + LVD+ S+ G + A ++ M +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFL---SDVYIGSALVDMYSKCGNVNDAQRVFDEMG-D 215
Query: 471 ADTGVWGSLL 480
+ W SL+
Sbjct: 216 RNVVSWNSLI 225
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 357 bits (915), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 318/562 (56%), Gaps = 43/562 (7%)
Query: 43 RLFSTQYVFVNNAKI---SALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
R FS F N + LSR +I AR++F+Q+ + V + +ITGY ++ L +
Sbjct: 27 RSFSVTVEFQNREVLICNHLLSR--RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVD 84
Query: 100 SKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRL 159
+ NLF MPV+++VSWN MI+GC++ ++ A F MPER+ ++ AM++G + G++
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKV 144
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNE 219
++A RLF QMP ++ ++ +M+ G+++ G+VD A L M KNV+SWT MI G +NE
Sbjct: 145 DQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNE 204
Query: 220 RFCEARELFYRM----------------------PDYDKNV---------------FVVT 242
R EA +LF M P + + +V
Sbjct: 205 RSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSA 264
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++IT + + ++R +F+ + + A+++GY+ N E+AL +FSGM++ + P
Sbjct: 265 SLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILP 324
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
+ +T S +CSAL L+ G++ H + ++ G E + V N+++ MYS G + D+ F
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF 384
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+I ++VSWN+II AQHG + A + F QM +PD ITF LLSAC H G +
Sbjct: 385 IKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLE 444
Query: 423 ESMDLFELMVK-VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLA 481
+ LF M + I +HYTC+VDIL R G+L++A ++ + M + + VW +LL+
Sbjct: 445 KGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLS 504
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQ 541
AC ++ +V+ GE AA + LD ++SA YV+LSN+YA+AG W +V+++R+ MK+ G+ K+
Sbjct: 505 ACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKK 564
Query: 542 CAYSWIEIGNKVHYFLGGDMSH 563
SW+ I K H F GD H
Sbjct: 565 PGSSWVVIRGKKHEFFSGDQPH 586
>sp|O04590|PPR88_ARATH Pentatricopeptide repeat-containing protein At1g62260,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E10 PE=2
SV=1
Length = 656
Score = 350 bits (897), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 301/551 (54%), Gaps = 59/551 (10%)
Query: 54 NAKISALSRAGKI---SAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
N IS G I AR+LFD+M ++D +WN +I+GY +N + E+ LF+ MP +
Sbjct: 106 NTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER 165
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA-------------------------- 144
N VSW+ MI G N +D A F+ MP ++++
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYG 225
Query: 145 -----------TYNAMISGFLKHGRLEEATRLFEQMPR---------------RNVISYT 178
YN +I G+ + G++E A LF+Q+P +NV+S+
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 179 AMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV 238
+M+ ++K G+V AR L D M ++ +SW MI GYV R +A LF MP+ D +
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHS 345
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
+ M++G+ VG +E AR FE+ K VS+N++IA Y +N +EA+ LF M
Sbjct: 346 W--NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIE 403
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+PD TL S+ +A + L L G Q H +V++ +V V NA+ITMYSRCG I++S
Sbjct: 404 GEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMES 462
Query: 359 ELAFRQIH-SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
F ++ +++WN +I +A HG+ +AL F M NG P ITF+S+L+AC H
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 522
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
AG V+E+ F M+ VY I P EHY+ LV++ S GQ E+A I MPFE D VWG
Sbjct: 523 AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWG 582
Query: 478 SLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQG 537
+LL AC I NV L +AA+ M L+P++S YV+L N+YA G+W + ++VR+ M+ +
Sbjct: 583 ALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKR 642
Query: 538 VTKQCAYSWIE 548
+ K+ SW++
Sbjct: 643 IKKERGSSWVD 653
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 205/443 (46%), Gaps = 64/443 (14%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTT---------------KDVITWNAIITGYWQN 94
V+ N I + G++ AAR LFDQ+ K+V++WN++I Y +
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL 154
G + ++ LF M ++ +SWN MI G + R++DAF F MP R+ ++N M+SG+
Sbjct: 295 GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYA 354
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFK-------NVVS 207
G +E A FE+ P ++ +S+ +++ + K + +A L M+ + + S
Sbjct: 355 SVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 208 WTVMITGYVKNERFCEARELFYR--MPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
TG V + ++ + +PD V V A+IT + + G + +R +F+ ++
Sbjct: 415 LLSASTGLVNLRLGMQMHQIVVKTVIPD----VPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 266 PK-DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
K + +++NAMI GYA +G A EAL LF M + P T VSV AC+ L++E +
Sbjct: 471 LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
V S ++ +I P + +++++ + G
Sbjct: 531 AQFV-----------------------------SMMSVYKIE-PQMEHYSSLVNVTSGQG 560
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHY 444
+E+A+ + M F+PD + +LL AC V + E M ++ SS Y
Sbjct: 561 QFEEAMYIITSM---PFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEP--ESSTPY 615
Query: 445 TCLVDILSRAGQLEKAWQITQGM 467
L ++ + G ++A Q+ M
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNM 638
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 192/549 (34%), Positives = 330/549 (60%), Gaps = 22/549 (4%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V+N+ I+ + G + AR LFD+ K V+TWN++I+GY NG E+ +F SM +
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 112 I----VSWNCMIAGCID------NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ S+ +I C + +++ + + + ++N T A++ + K + +
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTAMLD 348
Query: 162 ATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGY- 215
A RLF+++ NV+S+TAM+ GF++ ++A L M K V +++V++T
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
V + A+ + +Y+++ V TA++ + K+G +E A +F I KD V+++AM
Sbjct: 409 VISPSEVHAQVV---KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL-LNEGRQSHVLVIRNG 334
+AGYAQ G E A+++F + K ++P++ T S+ C+A + +G+Q H I++
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
++++ V +A++TMY++ G I +E F++ +LVSWN++I+ +AQHG KAL F
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
+M DG+TF+ + +AC HAG V E F++MV+ I P+ EH +C+VD+ SRA
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 455 GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLS 514
GQLEKA ++ + MP A + +W ++LAAC ++ ELG LAA+K+ + P++SA YV+LS
Sbjct: 646 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705
Query: 515 NLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELK 574
N+YA +G W++ +VR LM E+ V K+ YSWIE+ NK + FL GD SHP D+I+++L+
Sbjct: 706 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLE 765
Query: 575 RASVQMKSV 583
S ++K +
Sbjct: 766 DLSTRLKDL 774
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 199/439 (45%), Gaps = 83/439 (18%)
Query: 121 GCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR--------- 171
G + + R+ +A + F P R+ +Y +++ GF + GR +EA RLF + R
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 172 ------------------------------RNVISYTAMLDGFMKKGEVDKARALSDYMS 201
+V T+++D +MK R + D M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRMPD---------------------------- 233
+NVV+WT +I+GY +N E LF RM +
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
DK + V ++I + K G + AR+LF++ + K V++N+MI+GYA NG+
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
EAL +F M ++ +++ SV C+ L+ L Q H V++ GF + ++ A
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 345 VITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDP 403
++ YS+C +LD+ F++I N+VSW +I+ F Q+ E+A+ FS+M G P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 404 DGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQI 463
+ T+ +L+A V ++ +VK SS T L+D + G++E+A ++
Sbjct: 396 NEFTYSVILTAL----PVISPSEVHAQVVKT-NYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 464 TQGMPFEADTGVWGSLLAA 482
G+ + D W ++LA
Sbjct: 451 FSGID-DKDIVAWSAMLAG 468
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 216/516 (41%), Gaps = 89/516 (17%)
Query: 16 LFPPILRILSTPDSCGNFTPHSSNC-LIRLFSTQYVFVNNAKISALSRAGKISAARQLFD 74
+F +L++ +T C +C I+ V V + + + R++FD
Sbjct: 95 IFSSVLKVSATL--CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152
Query: 75 QMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDY 134
+M ++V+TW +I+GY +N E LF M +
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGT---------------------- 190
Query: 135 FQAMPERNTATYNAMISGFLKHG----RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEV 190
+ N+ T+ A + + G L+ T + + + + ++++ ++K G V
Sbjct: 191 -----QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNV 245
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------------------ 232
KAR L D K+VV+W MI+GY N EA +FY M
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Query: 233 ---------------------DYDKNVFVVTAMITGFCK-VGMLENARLLFERIQPKDCV 270
+D+N + TA++ + K ML+ RL E + V
Sbjct: 306 ANLKELRFTEQLHCSVVKYGFLFDQN--IRTALMVAYSKCTAMLDALRLFKEIGCVGNVV 363
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
S+ AMI+G+ QN EEA+ LFS M + ++P++ T + TA + + H V
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHAQV 419
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKAL 390
++ +E + +V A++ Y + G + ++ F I ++V+W+ ++A +AQ G E A+
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 391 IFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC---- 446
F ++ G P+ TF S+L+ C N SM + + I + C
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVC---AATNASMGQGK-QFHGFAIKSRLDSSLCVSSA 535
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
L+ + ++ G +E A ++ + E D W S+++
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISG 570
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 313/551 (56%), Gaps = 29/551 (5%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N+ ++ + ++ +AR++FD+MT +DVI+WN+II GY NG ++ ++F M V
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 112 I----VSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEAT 163
I + + AGC D+ I +A R N ++ + K G L+ A
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+F +M R+V+SYT+M+ G+ ++G +A L + M + + +T + C
Sbjct: 352 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN----CC 407
Query: 224 ARELFYRMPDYDK-------------NVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
AR YR+ D K ++FV A++ + K G ++ A L+F ++ KD +
Sbjct: 408 AR---YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDII 464
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVL 329
S+N +I GY++N A EAL LF+ +++ PD+ T+ V AC++L ++GR+ H
Sbjct: 465 SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY 524
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
++RNG+ ++ V N+++ MY++CG +L + + F I S +LVSW +IA + HG ++A
Sbjct: 525 IMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 584
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
+ F+QM G + D I+F+SLL AC H+G V+E F +M I P+ EHY C+VD
Sbjct: 585 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVD 644
Query: 450 ILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
+L+R G L KA++ + MP D +WG+LL C I+ +V+L E A+K+ EL+P+N+
Sbjct: 645 MLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 704
Query: 510 YVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
YV+++N+YA A W V R+R + ++G+ K SWIEI +V+ F+ GD S+P + I
Sbjct: 705 YVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 764
Query: 570 HLELKRASVQM 580
L++ +M
Sbjct: 765 EAFLRKVRARM 775
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 112/223 (50%), Gaps = 5/223 (2%)
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ G L+ A +F+ ++ + + +N ++ A++G ++ LF M+ ++ D T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
V + S+L+ ++ G Q H ++++GF SV N+++ Y + + + F ++
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
+++SWN+II + +G EK L F QM ++G + D T +S+ + C + ++ +
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 428 FELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQITQGMP 468
+ VK S E C L+D+ S+ G L+ A + + M
Sbjct: 319 HSIGVKA---CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV+NA + ++ G + A +F +M KD+I+WN II GY +N + E+ +LF +
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
+ S + C+ +P A+ +A G HG + +
Sbjct: 492 EKRFSPDERTVACV--------------LPA--CASLSAFDKGREIHGYIMRNGYFSD-- 533
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
R+V + +++D + K G + A L D ++ K++VSWTVMI GY + EA LF
Sbjct: 534 --RHVAN--SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 230 RM 231
+M
Sbjct: 590 QM 591
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 273 NAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
N + + ++G E A++L K D+ P TL SV C+ + L +G++ +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDP--RTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
NGF + ++ + + MY+ CG + ++ F ++ + WN ++ A+ G + ++
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 393 FSQMGLNGFDPDGITF 408
F +M +G + D TF
Sbjct: 183 FKKMMSSGVEMDSYTF 198
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 331 bits (849), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 198/567 (34%), Positives = 304/567 (53%), Gaps = 44/567 (7%)
Query: 57 ISALSRAGKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVS 114
I+ RAG+ A L+ + K D + N +++GY + G E+ +FQ M VK +VS
Sbjct: 151 ITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVS 210
Query: 115 WNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR--- 171
+ M+ G RI DA F M ERN T+ AMI G+ K G E+ LF +M +
Sbjct: 211 CSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 172 ---------------RNVISY----------------------TAMLDGFMKKGEVDKAR 194
R+ + Y +++ + K G + +A+
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 195 ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
A+ M K+ VSW +ITG V+ ++ EA ELF +MP K++ T MI GF G +
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG--KDMVSWTDMIKGFSGKGEI 388
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
LF + KD +++ AMI+ + NG EEAL F M++ ++ P+ T SV +A
Sbjct: 389 SKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSAT 448
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
++L L EG Q H V++ ++SV N++++MY +CG D+ F I PN+VS+N
Sbjct: 449 ASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYN 508
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
T+I+ ++ +G +KAL FS + +G +P+G+TFL+LLSAC H G V+ F+ M
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS 568
Query: 435 YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGEL 494
Y I P +HY C+VD+L R+G L+ A + MP + +GVWGSLL+A +L V+L EL
Sbjct: 569 YNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAEL 628
Query: 495 AAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVH 554
AAKK+ EL+P ++ YV+LS LY+ G RD R+ + K + + K SWI + +VH
Sbjct: 629 AAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVH 688
Query: 555 YFLGGDMSHPCIDKIHLELKRASVQMK 581
FL GD S +++I LK +M+
Sbjct: 689 NFLAGDESQLNLEEIGFTLKMIRKEME 715
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 216/398 (54%), Gaps = 20/398 (5%)
Query: 70 RQLFDQMTTKDVI-TWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRI 128
R + TT I N+ I+ + +NG LQE++ +F+ M ++IVSW MI+ +N ++
Sbjct: 38 RNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKM 97
Query: 129 DDAFDYFQAMPERNTATYNAMISGFLKHG-RLEEATRLFEQMPRRNVISYTAMLDGFMKK 187
A+ F MP R T +YNAMI+ +K+ L +A LF +P +N +SY M+ GF++
Sbjct: 98 SKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRA 157
Query: 188 GEVDKARAL--SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMI 245
G D+A L + F++ V+ V+++GY++ ++ EA +F M K V ++M+
Sbjct: 158 GRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMA--VKEVVSCSSMV 215
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPDD 304
G+CK+G + +AR LF+R+ ++ +++ AMI GY + G E+ LF M + D++ +
Sbjct: 216 HGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNS 275
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
TL +F AC EG Q H LV R E ++ + N++++MYS+ G + +++ F
Sbjct: 276 NTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGV 335
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES 424
+ + + VSWN++I Q +A F +M D +++ ++ G++++
Sbjct: 336 MKNKDSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKC 391
Query: 425 MDLFELMVKVYGIIPSSEH--YTCLVDILSRAGQLEKA 460
++LF G++P ++ +T ++ G E+A
Sbjct: 392 VELF-------GMMPEKDNITWTAMISAFVSNGYYEEA 422
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 219/502 (43%), Gaps = 112/502 (22%)
Query: 34 TPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQ 93
T + N L ++ +F N++IS +R G + A +F QM+ + +++W A+I+ Y +
Sbjct: 34 TQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAE 93
Query: 94 NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDND-RIDDAFDYFQAMPERNTATYNAMISG 152
NG + ++ +F MPV+ S+N MI I N + A++ F +PE+N +Y MI+G
Sbjct: 94 NGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITG 153
Query: 153 FLKHGRLEEA---------------------------------TRLFEQMPRRNVISYTA 179
F++ GR +EA R+F+ M + V+S ++
Sbjct: 154 FVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSS 213
Query: 180 MLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM-------- 231
M+ G+ K G + AR+L D M+ +NV++WT MI GY K F + LF RM
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV 273
Query: 232 ------------PDYDK------------------NVFVVTAMITGFCKVGMLENARLLF 261
D+ + ++F+ ++++ + K+G + A+ +F
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 262 ERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLN 321
++ KD VS+N++I G Q EA LF M DM
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDM--------------------- 372
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
VS + +I +S G I F + + ++W +I+AF
Sbjct: 373 -----------------VSWTD-MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFV 414
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
+G+YE+AL +F +M P+ TF S+LSA + E + + +VK+ I+
Sbjct: 415 SNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM-NIVNDL 473
Query: 442 EHYTCLVDILSRAGQLEKAWQI 463
LV + + G A++I
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKI 495
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 33/278 (11%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ N+ +S S+ G + A+ +F M KD ++WN++ITG Q + E+ LF+ MP
Sbjct: 310 LFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG 369
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
K++VSW MI G I + F MPE++ T+ AMIS F+ +G EEA F +M
Sbjct: 370 KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM 429
Query: 170 PRRNVI--SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAREL 227
++ V SYT F +V+S T + + E ++
Sbjct: 430 LQKEVCPNSYT-----------------------FSSVLSATASLADLI------EGLQI 460
Query: 228 FYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
R+ + ++ V ++++ +CK G +A +F I + VS+N MI+GY+ NG
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFG 520
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++AL+LFS + +P+ T +++ +AC + ++ G
Sbjct: 521 KKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 190/584 (32%), Positives = 306/584 (52%), Gaps = 64/584 (10%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
VFV NA ++ SR +S AR++FD+M+ DV++WN+II Y + G + + +F M
Sbjct: 162 VFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
Query: 109 ---------------------------------------VKNIVSWNCMIAGCIDNDRID 129
++N+ NC++ +D
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMD 281
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFM 185
+A F M ++ ++NAM++G+ + GR E+A RLFE+M + +V++++A + G+
Sbjct: 282 EANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYA 341
Query: 186 KKGEVDKARALSDYMSFK----NVVSWTVMITGYVKNERFCEARELFYRMPDY------- 234
++G +A + M N V+ +++G +E+ Y
Sbjct: 342 QRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKN 401
Query: 235 ---DKNVFVVTAMITGFCKVGMLENARLLFERIQPK--DCVSFNAMIAGYAQNGVAEEAL 289
D+N+ V+ +I + K ++ AR +F+ + PK D V++ MI GY+Q+G A +AL
Sbjct: 402 GHGDENM-VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 290 RLFSGMIKMDMQ--PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA-NVSVCNAVI 346
L S M + D Q P+ T+ AC++L L G+Q H +RN A + V N +I
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLI 520
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
MY++CG I D+ L F + + N V+W +++ + HG+ E+AL F +M GF DG+
Sbjct: 521 DMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGV 580
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQG 466
T L +L AC H+G +++ M+ F M V+G+ P EHY CLVD+L RAG+L A ++ +
Sbjct: 581 TLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEE 640
Query: 467 MPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDV 526
MP E VW + L+ C I+ VELGE AA+K+ EL + Y +LSNLYA AG W+DV
Sbjct: 641 MPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDV 700
Query: 527 TRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
TR+R LM+ +GV K+ SW+E F GD +HP +I+
Sbjct: 701 TRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIY 744
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 200/470 (42%), Gaps = 76/470 (16%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
++ +VF +IS++ R G+ + A L + +V NA++ Y + L +++ +F
Sbjct: 128 YTFPFVFKACGEISSV-RCGESAHALSLVTGFIS-NVFVGNALVAMYSRCRSLSDARKVF 185
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAMISGFLKHG 157
M V ++VSWN +I + A + F M P+ T L
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 158 RLEEATRLFEQMPR--RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY 215
L + F +N+ ++D + K G +D+A + MS K+VVSW M+ GY
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ RF +A LF +M + E+I+ D V+++A
Sbjct: 306 SQIGRFEDAVRLFEKMQE----------------------------EKIK-MDVVTWSAA 336
Query: 276 IAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI---- 331
I+GYAQ G+ EAL + M+ ++P++ TL+SV + C+++ L G++ H I
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 332 ---RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP---NLVSWNTIIAAFAQHGH 385
+NG V N +I MY++C + + F + SP ++V+W +I ++QHG
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL-SPKERDVVTWTVMIGGYSQHGD 455
Query: 386 YEKALIFFSQMGLNGFD--PDGITFLSLLSACG-----------HAGKVNESMDLFELMV 432
KAL S+M P+ T L AC HA + + L V
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
CL+D+ ++ G + A + M + + W SL+
Sbjct: 516 S-----------NCLIDMYAKCGSISDARLVFDNMMAKNEV-TWTSLMTG 553
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 128/248 (51%), Gaps = 9/248 (3%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDC--VSFNAMIAGYAQNGVAEEALRLFSGMIK 297
+ + +I+ + VG L +A L R P D +N++I Y NG A + L LF M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+ PD+ T VF AC + + G +H L + GF +NV V NA++ MYSRC + D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSACG 416
+ F ++ ++VSWN+II ++A+ G + AL FS+M G PD IT +++L C
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 417 HAG--KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
G + + + F + + +I + CLVD+ ++ G +++A + M + D
Sbjct: 241 SLGTHSLGKQLHCFAVTSE---MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVV 296
Query: 475 VWGSLLAA 482
W +++A
Sbjct: 297 SWNAMVAG 304
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 220/519 (42%), Gaps = 107/519 (20%)
Query: 18 PPILRILSTPDSCGNFTPHSSNCLIRLFST-----QYVFVNNAKISALSRAGKISAARQL 72
P + +++ C + HS + F+ Q +FV N + ++ G + A +
Sbjct: 227 PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI----VSWNCMIAGCIDNDRI 128
F M+ KDV++WNA++ GY Q G +++ LF+ M + I V+W+ I+G
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 129 DDAFDYFQAM----PERNTATYNAMISGFLKHGRLEEATRLF---EQMP---RRNV---- 174
+A + M + N T +++SG G L + + P R+N
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDE 406
Query: 175 -ISYTAMLDGFMKKGEVDKARALSDYMSFK--NVVSWTVMITGYVKNERFCEARELFYRM 231
+ ++D + K +VD ARA+ D +S K +VV+WTVMI GY ++ +A EL M
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 232 PDYD----------------------------------KN------VFVVTAMITGFCKV 251
+ D +N +FV +I + K
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKC 526
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G + +ARL+F+ + K+ V++ +++ GY +G EEAL +F M ++ + D TL+ V
Sbjct: 527 GSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVL 586
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
ACS ++++G + N + T++ G+ SP
Sbjct: 587 YACSHSGMIDQGMEYF---------------NRMKTVF----GV-----------SPGPE 616
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+ ++ + G AL +M + +P + +++ LS C GKV E +
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPM---EPPPVVWVAFLSCCRIHGKVELGEYAAEKI 673
Query: 432 VKVYGIIPSSEH---YTCLVDILSRAGQLEKAWQITQGM 467
++ +S H YT L ++ + AG+ + +I M
Sbjct: 674 TEL-----ASNHDGSYTLLSNLYANAGRWKDVTRIRSLM 707
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 153/316 (48%), Gaps = 19/316 (6%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRN--VISYTAMLDGFMKKGEVDKARALSDYMSFKNVV 206
+IS ++ G L A L + P + V + +++ + G +K L M + +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM---HSL 121
Query: 207 SWT---------VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENA 257
SWT G + + R E+ + + NVFV A++ + + L +A
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 258 RLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSA 316
R +F+ + D VS+N++I YA+ G + AL +FS M + +PD+ TLV+V C++
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 317 LQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTI 376
L + G+Q H + + N+ V N ++ MY++CG + ++ F + ++VSWN +
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 377 IAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYG 436
+A ++Q G +E A+ F +M D +T+ + +S G E++ + M+ G
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-G 360
Query: 437 IIPSSEHYTCLVDILS 452
I P+ L+ +LS
Sbjct: 361 IKPNE---VTLISVLS 373
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/647 (30%), Positives = 318/647 (49%), Gaps = 119/647 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L + +V NA +S G + +A +F M+ +D +T+N +I G Q G+ +++
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 101 KNLFQSM------PVKNIV----------------------------SWNCMIAGCIDN- 125
LF+ M P N + + N I G + N
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 126 ----DRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVI--SYT- 178
I+ A DYF N +N M+ + L + R+F QM ++ YT
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 179 ------------------------------------AMLDGFMKKGEVDKARALSDYMSF 202
++D + K G++D A + +
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 203 KNVVSWTVMITGYVKNERFCEARELFYRMPD----------------------------- 233
K+VVSWT MI GY + +A F +M D
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 234 --------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ ++ A++T + + G +E + L FE+ + D +++NA+++G+ Q+G
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
EEALR+F M + + ++ T S A S + +G+Q H ++ + G+++ VCNA+
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
I+MY++CG I D+E F ++ + N VSWN II A+++HG +AL F QM + P+
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 793
Query: 406 ITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQ 465
+T + +LSAC H G V++ + FE M YG+ P EHY C+VD+L+RAG L +A + Q
Sbjct: 794 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853
Query: 466 GMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMW-- 523
MP + D VW +LL+ACV++ N+E+GE AA + EL+P++SA YV+LSNLYA + W
Sbjct: 854 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDA 913
Query: 524 RDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
RD+TR + MKE+GV K+ SWIE+ N +H F GD +HP D+IH
Sbjct: 914 RDLTRQK--MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 958
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 182/421 (43%), Gaps = 51/421 (12%)
Query: 91 YWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMI 150
Y G L + +F MP + I +WN MI + I + F F M N
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 151 SGFLKHGR--------LEEA-TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMS 201
SG L+ R +E+ R+ Q R + + ++D + + G VD AR + D +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 202 FKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------------- 233
K+ SW MI+G KNE EA LF M P
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 234 ---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGV 284
+ + +V A+++ + +G L +A +F + +D V++N +I G +Q G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
E+A+ LF M ++PD TL S+ ACSA L G+Q H + GF +N + A
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ +Y++C I + F + N+V WN ++ A+ + F QM + P+
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC--LVDILSRAGQLEKAWQ 462
T+ S+L C G + + ++K + + Y C L+D+ ++ G+L+ AW
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA---YVCSVLIDMYAKLGKLDTAWD 546
Query: 463 I 463
I
Sbjct: 547 I 547
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 168/362 (46%), Gaps = 44/362 (12%)
Query: 142 NTATYNAMISGFLK-HGRLEEATRLFEQMPRRNVIS----YTAMLDGFMKKGEVDKARAL 196
N T ++ G LK +G L+E +L Q+ + + S + D ++ KG++ A +
Sbjct: 83 NHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKV 142
Query: 197 SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD----------------- 233
D M + + +W MI E LF RM P+
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 234 YD---------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+D + V +I + + G ++ AR +F+ ++ KD S+ AMI+G
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
++N EA+RLF M + + P SV +AC ++ L G Q H LV++ GF ++
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
VCNA++++Y G ++ +E F + + V++NT+I +Q G+ EKA+ F +M L
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+G +PD T SL+ AC G + L K+ G +++ L+++ ++ +E
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALLNLYAKCADIE 441
Query: 459 KA 460
A
Sbjct: 442 TA 443
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 197/452 (43%), Gaps = 30/452 (6%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKN 111
V N I SR G + AR++FD + KD +W A+I+G +N E+ LF M V
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 112 IV----SWNCMIAGC--IDNDRIDDAFDYFQAMPERNTATY--NAMISGFLKHGRLEEAT 163
I+ +++ +++ C I++ I + ++ TY NA++S + G L A
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 164 RLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE 223
+F M +R+ ++Y +++G + G +KA L M + + + V C
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA---CS 400
Query: 224 ARELFYRMPD---------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
A +R + N + A++ + K +E A F + ++ V +N
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
M+ Y + R+F M ++ P+ T S+ C L L G Q H +I+
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFS 394
F+ N VC+ +I MY++ G + + + ++VSW T+IA + Q+ +KAL F
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580
Query: 395 QMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRA 454
QM G D + + +SAC + E + V G LV + SR
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRC 639
Query: 455 GQLEKAWQITQGMPFE----ADTGVWGSLLAA 482
G++E+++ + FE D W +L++
Sbjct: 640 GKIEESY-----LAFEQTEAGDNIAWNALVSG 666
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 2/188 (1%)
Query: 300 MQPDDATLVSVFTACSALQ-LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
++P+ TL + C L+EGR+ H +++ G ++N + + Y G + +
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 359 ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHA 418
F ++ + +WN +I A + F +M P+ TF +L AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 419 GKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ ++ + G+ S+ L+D+ SR G ++ A ++ G+ + D W +
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DHSSWVA 258
Query: 479 LLAACVIN 486
+++ N
Sbjct: 259 MISGLSKN 266
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 322/580 (55%), Gaps = 18/580 (3%)
Query: 17 FPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-VFVNNAKISALSRAGKISAARQLFDQ 75
FP +L+ T + +CL F + V+V + I SR + AR LFD+
Sbjct: 156 FPSVLKACRTV-----IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 76 MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI---DNDRIDDAF 132
M +D+ +WNA+I+GY Q+G +E+ L + + V+ +++ C D +R
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 133 DY-FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
Y + E N +I + + GRL + ++F++M R++IS+ +++ + +
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 192 KARALSDYMSFKNV------VSWTVMITGYVKNERFCEARELF-YRMPDYDKNVFVVTAM 244
+A +L M + + I + + R C + + F R + +++ + A+
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 245 ITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM-DMQPD 303
+ + K+G++++AR +F + D +S+N +I+GYAQNG A EA+ +++ M + ++ +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 304 DATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFR 363
T VSV ACS L +G + H +++NG +V V ++ MY +CG + D+ F
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNE 423
QI N V WNT+IA HGH EKA++ F +M G PD ITF++LLSAC H+G V+E
Sbjct: 511 QIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
FE+M YGI PS +HY C+VD+ RAGQLE A + + M + D +WG+LL+AC
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Query: 484 VINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCA 543
++ NV+LG++A++ + E++P++ +V+LSN+YA+AG W V +R + +G+ K
Sbjct: 631 RVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG 690
Query: 544 YSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
+S +E+ NKV F G+ +HP ++++ EL ++K +
Sbjct: 691 WSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/526 (33%), Positives = 299/526 (56%), Gaps = 14/526 (2%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
ISALS + + A ++F+Q+ +V N++I + QN ++ +F M + + N
Sbjct: 58 ISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADN 117
Query: 117 C----MIAGCIDND---RIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRL--EEATRLF 166
++ C + ++ + + + NA+I + + G L +A +LF
Sbjct: 118 FTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLF 177
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
E+M R+ +S+ +ML G +K GE+ AR L D M ++++SW M+ GY + +A E
Sbjct: 178 EKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFE 237
Query: 227 LFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFER--IQPKDCVSFNAMIAGYAQNGV 284
LF +MP+ +N + M+ G+ K G +E AR++F++ + K+ V++ +IAGYA+ G+
Sbjct: 238 LFEKMPE--RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGL 295
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNA 344
+EA RL M+ ++ D A ++S+ AC+ LL+ G + H ++ R+ +N V NA
Sbjct: 296 LKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNA 355
Query: 345 VITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ MY++CG + + F I +LVSWNT++ HGH ++A+ FS+M G PD
Sbjct: 356 LLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPD 415
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
+TF+++L +C HAG ++E +D F M KVY ++P EHY CLVD+L R G+L++A ++
Sbjct: 416 KVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVV 475
Query: 465 QGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWR 524
Q MP E + +WG+LL AC ++ V++ + + +LDP + Y +LSN+YAAA W
Sbjct: 476 QTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWE 535
Query: 525 DVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIH 570
V +R MK GV K S +E+ + +H F D SHP D+I+
Sbjct: 536 GVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 199/386 (51%), Gaps = 15/386 (3%)
Query: 39 NCLIRLFSTQYVFVNNAKISALSRAGKISA--ARQLFDQMTTKDVITWNAIITGYWQNGF 96
N + +L + ++V NA I SR G + A +LF++M+ +D ++WN+++ G + G
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH 156
L++++ LF MP ++++SWN M+ G + AF+ F+ MPERNT +++ M+ G+ K
Sbjct: 201 LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 157 GRLEEATRLFEQM--PRRNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVSWTVM 211
G +E A +F++M P +NV+++T ++ G+ +KG + +A L D M K + +
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 212 ITGYVKNERFCEARELFY---RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
I + + + N +V+ A++ + K G L+ A +F I KD
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
VS+N M+ G +G +EA+ LFS M + ++PD T ++V +C+ L++EG +
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG-IDYF 439
Query: 329 LVIRNGFE--ANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNLVSWNTIIAAFAQHGH 385
+ ++ V ++ + R G + ++ + + PN+V W ++ A H
Sbjct: 440 YSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNE 499
Query: 386 YEKAL-IFFSQMGLNGFDPDGITFLS 410
+ A + + + L+ DP + LS
Sbjct: 500 VDIAKEVLDNLVKLDPCDPGNYSLLS 525
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 41/243 (16%)
Query: 30 CGNFTPHSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIIT 89
CG + L S + N+ + L +AG++ AR+LFD+M +D+I+WN ++
Sbjct: 165 CGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLD 224
Query: 90 GYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAM--PERNTATYN 147
GY + + ++ LF+ MP +N VSW+ M+ G ++ A F M P +N T+
Sbjct: 225 GYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWT 284
Query: 148 AMISGFLKHGRLEEATRLFEQM-----------------------------------PRR 172
+I+G+ + G L+EA RL +QM R
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 173 NVIS----YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
N+ S A+LD + K G + KA + + + K++VSW M+ G + EA ELF
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 229 YRM 231
RM
Sbjct: 405 SRM 407
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 36/206 (17%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
LN+ +Q H +IR ++ + +I+ S C + F Q+ PN+ N++I A
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRA 91
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG-------------HAGKVNESMD 426
AQ+ +A FS+M G D T+ LL AC H K+ S D
Sbjct: 92 HAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSD 151
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQL--EKAWQITQGMPFEADTGVWGSLLAACV 484
++ +P++ L+D SR G L A ++ + M E DT W S+L
Sbjct: 152 IY---------VPNA-----LIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGGL- 195
Query: 485 INLNVELGELA-AKKMRELDPQNSAV 509
V+ GEL A+++ + PQ +
Sbjct: 196 ----VKAGELRDARRLFDEMPQRDLI 217
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 318 bits (816), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 319/634 (50%), Gaps = 80/634 (12%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR F+ N + A + + AR++FD++ ++ +WN ++ Y + G + E
Sbjct: 32 IIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEM 91
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA--------------TY 146
++ F+ +P ++ V+WN +I G + + A + M +A +
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 147 NAMIS-GFLKHGR-------------------------LEEATRLFEQMPRRNVISYTAM 180
N +S G HG+ + +A ++F + RN + Y ++
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 181 LDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP-------- 232
+ G + G ++ A L M K+ VSW MI G +N EA E F M
Sbjct: 212 MGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 233 -----------------------------DYDKNVFVVTAMITGFCKVGMLENARLLFER 263
++ +++V +A+I +CK L A+ +F+R
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 264 IQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG 323
++ K+ VS+ AM+ GY Q G AEEA+++F M + + PD TL +AC+ + L EG
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
Q H I +G V+V N+++T+Y +CG I DS F +++ + VSW +++A+AQ
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
G + + F +M +G PDG+T ++SAC AG V + F+LM YGI+PS H
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 444 YTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELD 503
Y+C++D+ SR+G+LE+A + GMPF D W +LL+AC N+E+G+ AA+ + ELD
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELD 570
Query: 504 PQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSH 563
P + A Y +LS++YA+ G W V ++R M+E+ V K+ SWI+ K+H F D S
Sbjct: 571 PHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESS 630
Query: 564 PCIDKIHLELKRASVQMKSVDDFVEIATSWSSFD 597
P +D+I+ +L+ + K +D+ + TS+ D
Sbjct: 631 PYLDQIYAKLEE--LNNKIIDNGYKPDTSFVHHD 662
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 129/290 (44%), Gaps = 49/290 (16%)
Query: 40 CLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQE 99
C+IR +++V +A I + + A+ +FD+M K+V++W A++ GY Q G +E
Sbjct: 295 CIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEE 354
Query: 100 SKNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMIS 151
+ +F M I + I+ C + +++ + Y N++++
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVT 414
Query: 152 GFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVM 211
+ K G ++++TRLF +M R+ +S+TA M
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVSWTA-------------------------------M 443
Query: 212 ITGYVKNERFCEARELFYRMPDY--DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
++ Y + R E +LF +M + + +T +I+ + G++E + F+ + +
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 270 V-----SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
+ ++ MI ++++G EEA+R +G M PD ++ +AC
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFING---MPFPPDAIGWTTLLSAC 550
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/648 (29%), Positives = 311/648 (47%), Gaps = 120/648 (18%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR ++ + N ++ ++ GK++ A +F+ + KDV++WN++ITGY QNG + S
Sbjct: 40 IIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSS 99
Query: 101 ---KNLFQSMPVKNIVSWNCMIAGCIDNDR------------------------------ 127
LF+ M ++I+ +AG +
Sbjct: 100 YTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSL 159
Query: 128 ---------IDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN----- 173
++D F MPERNT T++ M+SG+ GR+EEA ++F R
Sbjct: 160 VGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD 219
Query: 174 ------------------------------------VISYTAMLDGFMKKGEVDKARALS 197
V A++ + K +++A +
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMF 279
Query: 198 DYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD------------------ 233
D +N ++W+ M+TGY +N EA +LF RM P
Sbjct: 280 DSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLE 339
Query: 234 -------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYA 280
+++++F TA++ + K G L +AR F+ +Q +D + ++I+GY
Sbjct: 340 EGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYV 399
Query: 281 QNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVS 340
QN EEAL L+ M + P+D T+ SV ACS+L L G+Q H I++GF V
Sbjct: 400 QNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVP 459
Query: 341 VCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNG 400
+ +A+ TMYS+CG + D L FR+ + ++VSWN +I+ + +G ++AL F +M G
Sbjct: 460 IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG 519
Query: 401 FDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKA 460
+PD +TF++++SAC H G V F +M G+ P +HY C+VD+LSRAGQL++A
Sbjct: 520 MEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA 579
Query: 461 WQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
+ + + +W LL+AC + ELG A +K+ L + S+ YV LS +Y A
Sbjct: 580 KEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTAL 639
Query: 521 GMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDK 568
G RDV RV M+ GV+K+ SWIE+ N+ H F+ GD HP I++
Sbjct: 640 GRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEE 687
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 9/199 (4%)
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
+ ++ P +TL+ T S + L GR H +IR G + N ++ Y++CG +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 357 DSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA---LIFFSQMGLNGFDPDGITFLSLLS 413
+ F I ++VSWN++I ++Q+G + + F +M P+ T +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 414 ACGHAGKVNESMDLFELMVKV--YGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
A L+VK+ +G I T LV + +AG +E ++ MP E
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVD---TSLVGMYCKAGLVEDGLKVFAYMP-ER 182
Query: 472 DTGVWGSLLAACVINLNVE 490
+T W ++++ VE
Sbjct: 183 NTYTWSTMVSGYATRGRVE 201
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/478 (37%), Positives = 265/478 (55%), Gaps = 33/478 (6%)
Query: 89 TGYWQNGFLQESKNLFQSMPVKNIVSWNCMIA-----GCIDNDRIDDAFDYFQAMPERNT 143
TG W + FLQ NC+I GC+ R F MP+R++
Sbjct: 150 TGLWSDLFLQ-----------------NCLIGLYLKCGCLGLSR-----QMFDRMPKRDS 187
Query: 144 ATYNAMISGFLKHGRLEEATRLFEQMPR--RNVISYTAMLDGFMKKGE-VDKARALSDYM 200
+YN+MI G++K G + A LF+ MP +N+IS+ +M+ G+ + + VD A L M
Sbjct: 188 VSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM 247
Query: 201 SFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLL 260
K+++SW MI GYVK+ R +A+ LF MP D V MI G+ K+G + +A+ L
Sbjct: 248 PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRD--VVTWATMIDGYAKLGFVHHAKTL 305
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACSALQL 319
F+++ +D V++N+M+AGY QN EAL +FS M K + PDD TLV V A + L
Sbjct: 306 FDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR 365
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L++ H+ ++ F + A+I MYS+CG I + L F I + ++ WN +I
Sbjct: 366 LSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG 425
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
A HG E A Q+ PD ITF+ +L+AC H+G V E + FELM + + I P
Sbjct: 426 LAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEP 485
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+HY C+VDILSR+G +E A + + MP E + +W + L AC + E GEL AK +
Sbjct: 486 RLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHL 545
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFL 557
N + YV+LSN+YA+ GMW+DV RVR +MKE+ + K SWIE+ +VH F
Sbjct: 546 ILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFF 603
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 217/412 (52%), Gaps = 50/412 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
+F+ N I + G + +RQ+FD+M +D +++N++I GY + G + ++ LF MP
Sbjct: 156 LFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPM 215
Query: 109 -VKNIVSWNCMIAGCID-NDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
+KN++SWN MI+G +D +D A F MPE++ ++N+MI G++KHGR+E+A LF
Sbjct: 216 EMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLF 275
Query: 167 EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARE 226
+ MPRR+V+++ M+DG+ K G V A+ L D M ++VV++ M+ GYV+N+ EA E
Sbjct: 276 DVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALE 335
Query: 227 LF-------YRMPD--------------------YDKNVFVV-----------TAMITGF 248
+F + +PD D ++++V A+I +
Sbjct: 336 IFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMY 395
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K G +++A L+FE I+ K +NAMI G A +G+ E A + + ++ ++PDD T V
Sbjct: 396 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFV 455
Query: 309 SVFTACSALQLLNEGRQSHVLVIR-NGFEANVSVCNAVITMYSRCGGILDSELAFRQIH- 366
V ACS L+ EG L+ R + E + ++ + SR G I ELA I
Sbjct: 456 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSI---ELAKNLIEE 512
Query: 367 ---SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSA 414
PN V W T + A + H +E + + L G++P LS + A
Sbjct: 513 MPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 564
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
+ +D +NA+I ++ +AL L M++ + D +L V ACS L + G
Sbjct: 82 EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGM 141
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q H + + G +++ + N +I +Y +CG + S F ++ + VS+N++I + + G
Sbjct: 142 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 201
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE-- 442
A F M + + I++ S++S G+A ++ D ++ K++ +P +
Sbjct: 202 LIVSARELFDLMPMEM--KNLISWNSMIS--GYA----QTSDGVDIASKLFADMPEKDLI 253
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
+ ++D + G++E A + MP D W +++
Sbjct: 254 SWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMI 290
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 316 bits (810), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 290/511 (56%), Gaps = 14/511 (2%)
Query: 85 NAIITGYWQ----NGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPE 140
NA+++ Y + L ++ +F + K+ SW M+ G + N D + + M +
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD 247
Query: 141 R-NTATYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARA 195
YNAMISG++ G +EA + +M + +Y +++ G + +
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 196 LSDYMSFKNVVSW---TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
+ Y+ + S+ +++ Y K +F EAR +F +MP K++ A+++G+ G
Sbjct: 308 VHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA--KDLVSWNALLSGYVSSG 365
Query: 253 MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFT 312
+ A+L+F+ ++ K+ +S+ MI+G A+NG EE L+LFS M + +P D
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 313 ACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVS 372
+C+ L G+Q H +++ GF++++S NA+ITMY++CG + ++ FR + + VS
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS 485
Query: 373 WNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMV 432
WN +IAA QHGH +A+ + +M G PD IT L++L+AC HAG V++ F+ M
Sbjct: 486 WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSME 545
Query: 433 KVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELG 492
VY I P ++HY L+D+L R+G+ A + + +PF+ +W +LL+ C ++ N+ELG
Sbjct: 546 TVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELG 605
Query: 493 ELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNK 552
+AA K+ L P++ Y++LSN++AA G W +V RVR LM+++GV K+ A SWIE+ +
Sbjct: 606 IIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Query: 553 VHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
VH FL D SHP + +++ L+ +M+ +
Sbjct: 666 VHTFLVDDTSHPEAEAVYIYLQDLGKEMRRL 696
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 190/400 (47%), Gaps = 41/400 (10%)
Query: 166 FEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
F PR ++++ ++D + K E++ AR L D +S + ++ T M++GY + AR
Sbjct: 43 FGFQPRAHILN--RLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLAR 100
Query: 226 ELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK----DCVSFNAMIAGYAQ 281
+F + P ++ + AMITGF +A LF +++ + D +F +++AG A
Sbjct: 101 GVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLAL 160
Query: 282 NGVAEE--------ALRLFSGMIKMDMQPDDATLVSVFTAC-SALQLLNEGRQSHVLVIR 332
E+ AL+ +G I LVSV++ C S+ LL+ R+ V
Sbjct: 161 VADDEKQCVQFHAAALKSGAGYI----TSVSNALVSVYSKCASSPSLLHSARK----VFD 212
Query: 333 NGFEANVSVCNAVITMYSRCGGI-LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
E + ++T Y + G L EL + LV++N +I+ + G Y++AL
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT-----C 446
+M +G + D T+ S++ AC AG L +L +V+ + E ++
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAG-------LLQLGKQVHAYVLRREDFSFHFDNS 325
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
LV + + G+ ++A I + MP + D W +LL+ V + ++ +L K+M+E +N
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKE---KN 381
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSW 546
++++ + A G + ++ MK +G + C Y++
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGF-EPCDYAF 420
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 18/227 (7%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N+ +S + GK AR +F++M KD+++WNA+++GY +G + E+K +F+ M KNI
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH----GRLEEATRLFEQ 168
+SW MI+G +N ++ F M + SG +K G + Q
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 169 MPR----RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEA 224
+ + ++ + A++ + K G V++AR + M + VSW +I ++ EA
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 225 RELFYRM------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
+++ M PD + ++T G+++ R F+ ++
Sbjct: 503 VDVYEEMLKKGIRPDR----ITLLTVLTACSHAGLVDQGRKYFDSME 545
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
NA I+ ++ G + ARQ+F M D ++WNA+I Q+G E+ ++++ M K I
Sbjct: 455 GNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI 514
Query: 113 ----VSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEEAT 163
++ ++ C +D YF +M Y +I + G+ +A
Sbjct: 515 RPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAE 574
Query: 164 RLFEQMPRRNVIS-YTAMLDGFMKKGEVD 191
+ E +P + + A+L G G ++
Sbjct: 575 SVIESLPFKPTAEIWEALLSGCRVHGNME 603
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 315 bits (807), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 182/505 (36%), Positives = 286/505 (56%), Gaps = 18/505 (3%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N+++ Y + G +K +F M V++I SWN MIA + ++D A F+ M ER+
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKN 204
T+N+MISGF + G A +F +M R +++S D F + L K
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP----DRFTLASVLSACANLEKLCIGKQ 300
Query: 205 VVSWTVM----ITGYVKNERFC---------EARELFYRMPDYDKNVFVVTAMITGFCKV 251
+ S V I+G V N AR L + D + TA++ G+ K+
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
G + A+ +F ++ +D V++ AMI GY Q+G EA+ LF M+ +P+ TL ++
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH-SPNL 370
+ S+L L+ G+Q H +++G +VSV NA+ITMY++ G I + AF I +
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
VSW ++I A AQHGH E+AL F M + G PD IT++ + SAC HAG VN+ F++
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M V IIP+ HY C+VD+ RAG L++A + + MP E D WGSLL+AC ++ N++
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
LG++AA+++ L+P+NS Y L+NLY+A G W + ++R MK+ V K+ +SWIE+
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Query: 551 NKVHYFLGGDMSHPCIDKIHLELKR 575
+KVH F D +HP ++I++ +K+
Sbjct: 661 HKVHVFGVEDGTHPEKNEIYMTMKK 685
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 235/511 (45%), Gaps = 123/511 (24%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++L V V+N+ ++ ++ G A+ +FD+M +D+ +WNA+I + Q G + +
Sbjct: 172 IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLA 231
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDD--AFDYFQAM-------PERNT-------- 143
F+ M ++IV+WN MI+G N R D A D F M P+R T
Sbjct: 232 MAQFEQMAERDIVTWNSMISGF--NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
Query: 144 -------------------------ATYNAMISGFLKHGRLEEATRLFEQMPRRN--VIS 176
NA+IS + + G +E A RL EQ ++ +
Sbjct: 290 ANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEG 349
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+TA+LDG++K G++++A+ + + ++VV+WT MI GY ++ + EA LF M +
Sbjct: 350 FTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ 409
Query: 237 -------------------------------------NVFVVTAMITGFCKVGMLENARL 259
+V V A+IT + K G + +A
Sbjct: 410 RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASR 469
Query: 260 LFERIQ-PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
F+ I+ +D VS+ +MI AQ+G AEEAL LF M+ ++PD T V VF+AC+
Sbjct: 470 AFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
L+N+GRQ F+ V + P L + ++
Sbjct: 530 LVNQGRQY--------FDMMKDVDKII----------------------PTLSHYACMVD 559
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
F + G ++A F +M + +PD +T+ SLLSAC +V++++DL ++ + ++
Sbjct: 560 LFGRAGLLQEAQEFIEKMPI---EPDVVTWGSLLSAC----RVHKNIDLGKVAAERLLLL 612
Query: 439 --PSSEHYTCLVDILSRAGQLEKAWQITQGM 467
+S Y+ L ++ S G+ E+A +I + M
Sbjct: 613 EPENSGAYSALANLYSACGKWEEAAKIRKSM 643
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 202/440 (45%), Gaps = 45/440 (10%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N ++ Y + G+ ++ LF MP++ SWN +++ +D ++F +P+R++
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNV----ISYTAMLDGFMKKGEVDKARALSDYM 200
++ MI G+ G+ +A R+ M + + + T +L ++ + + ++
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 201 S----FKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLEN 256
NV ++ Y K A+ +F RM D + + AMI +VG ++
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW--NAMIALHMQVGQMDL 230
Query: 257 ARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD-MQPDDATLVSVFTACS 315
A FE++ +D V++N+MI+G+ Q G AL +FS M++ + PD TL SV +AC+
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI-------------------- 355
L+ L G+Q H ++ GF+ + V NA+I+MYSRCGG+
Sbjct: 291 NLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350
Query: 356 ---LDSELA----------FRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFD 402
LD + F + ++V+W +I + QHG Y +A+ F M G
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 403 PDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQ 462
P+ T ++LS ++ + VK G I S L+ + ++AG + A +
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVK-SGEIYSVSVSNALITMYAKAGNITSASR 469
Query: 463 ITQGMPFEADTGVWGSLLAA 482
+ E DT W S++ A
Sbjct: 470 AFDLIRCERDTVSWTSMIIA 489
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 312 bits (799), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 292/543 (53%), Gaps = 41/543 (7%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV + R G++ AR++FD+M+ KDV+T +A++ Y + G L+E + M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP 170
I E N ++N ++SGF + G +EA +F+++
Sbjct: 212 GI---------------------------EANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 171 R----RNVISYTAMLDGFMKKGEVDKARALSDYMS----FKNVVSWTVMITGYVKNERFC 222
+ ++ +++L ++ R + Y+ K+ + MI Y K+
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 223 EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK----DCVSFNAMIAG 278
LF + + V A ITG + G+++ A +FE + + + VS+ ++IAG
Sbjct: 305 GIISLFNQFEMMEAGV--CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
AQNG EAL LF M ++P+ T+ S+ AC + L GR +H +R N
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
V V +A+I MY++CG I S++ F + + NLV WN+++ F+ HG ++ + F +
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
PD I+F SLLSACG G +E F++M + YGI P EHY+C+V++L RAG+L+
Sbjct: 483 TRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Query: 459 KAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYA 518
+A+ + + MPFE D+ VWG+LL +C + NV+L E+AA+K+ L+P+N YV+LSN+YA
Sbjct: 543 EAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYA 602
Query: 519 AAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASV 578
A GMW +V +R M+ G+ K SWI++ N+V+ L GD SHP ID+I ++ S
Sbjct: 603 AKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISK 662
Query: 579 QMK 581
+M+
Sbjct: 663 EMR 665
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 176/433 (40%), Gaps = 97/433 (22%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
+IA + + +DA Q++P+ +++++I K ++ +F +M +I
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 178 TAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKN 237
+ +L K ++ +FK V + C + + D +
Sbjct: 116 SHVLPNLFK--------VCAELSAFK------------VGKQIHCVSC-----VSGLDMD 150
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
FV +M + + G + +AR +F+R+ KD V+ +A++ YA+ G EE +R+ S M
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 298 MDMQ-----------------------------------PDDATLVSVFTACSALQLLNE 322
++ PD T+ SV + ++LN
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCG----------------------------- 353
GR H VI+ G + V +A+I MY + G
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 354 -GILDS-----ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
G++D EL Q N+VSW +IIA AQ+G +AL F +M + G P+ +T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
S+L ACG+ + V+V+ ++ + + L+D+ ++ G++ + + M
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 468 PFEADTGVWGSLL 480
P + + W SL+
Sbjct: 450 PTK-NLVCWNSLM 461
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 128/316 (40%), Gaps = 68/316 (21%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
++ +I + +A L+ + I SF+++I + + +++ +FS M
Sbjct: 51 YISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSH 110
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDS 358
+ PD L ++F C+ L G+Q H + +G + + V ++ MY RCG + D+
Sbjct: 111 GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDA 170
Query: 359 ELAFRQIH-----------------------------------SPNLVSWNTIIAAFAQH 383
F ++ N+VSWN I++ F +
Sbjct: 171 RKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS 230
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNES------------------- 424
G++++A++ F ++ GF PD +T S+L + G + +N
Sbjct: 231 GYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI 290
Query: 425 ---MDLFELMVKVYGIIPSSEHYTCL--------VDILSRAGQLEKA---WQITQGMPFE 470
+D++ VYGII + + + LSR G ++KA +++ + E
Sbjct: 291 SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 471 ADTGVWGSLLAACVIN 486
+ W S++A C N
Sbjct: 351 LNVVSWTSIIAGCAQN 366
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 18 PPILRILSTPDSCGNFTP-----HSSNCLIRLFSTQYVFVNNAKISALSRAGKISAARQL 72
P + I S +CGN + +R+ V V +A I ++ G+I+ ++ +
Sbjct: 386 PNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIV 445
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP----VKNIVSWNCMIAGCIDNDRI 128
F+ M TK+++ WN+++ G+ +G +E ++F+S+ + +S+ +++ C
Sbjct: 446 FNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLT 505
Query: 129 DDAFDYFQAMPER-----NTATYNAMISGFLKHGRLEEATRLFEQMP-RRNVISYTAMLD 182
D+ + YF+ M E Y+ M++ + G+L+EA L ++MP + + A+L+
Sbjct: 506 DEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
Query: 183 GFMKKGEVDKARALSDYM 200
+ VD A ++ +
Sbjct: 566 SCRLQNNVDLAEIAAEKL 583
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 46/91 (50%)
Query: 325 QSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG 384
Q+H ++++G + + + +I YS D++L + I P + S++++I A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 385 HYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
+ +++ FS+M +G PD +L C
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC 126
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/523 (33%), Positives = 296/523 (56%), Gaps = 30/523 (5%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
+V NA ++ GK+ AR +FD M +DVI+WN +I+GY++NG++ ++ +F M +
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE 212
Query: 111 NI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA----TYNAMISGFLKHGRLEEA 162
++ + M+ C ++ + + + E+ NA+++ +LK GR++EA
Sbjct: 213 SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA 272
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK----- 217
+F++M RR+VI++T M++G+ + G+V+ A L M F+ V V I V
Sbjct: 273 RFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDA 332
Query: 218 ---NERFC----EARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
N+ C R+ Y ++ + T++I+ + K ++ +F
Sbjct: 333 LKVNDGKCLHGWAVRQQVY------SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTG 386
Query: 271 SFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV 330
++A+IAG QN + +AL LF M + D++P+ ATL S+ A +AL L + H +
Sbjct: 387 PWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYL 446
Query: 331 IRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH----SPNLVSWNTIIAAFAQHGHY 386
+ GF +++ ++ +YS+CG + + F I S ++V W +I+ + HG
Sbjct: 447 TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDG 506
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
AL F +M +G P+ ITF S L+AC H+G V E + LF M++ Y + S HYTC
Sbjct: 507 HNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTC 566
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
+VD+L RAG+L++A+ + +PFE + VWG+LLAACV + NV+LGE+AA K+ EL+P+N
Sbjct: 567 IVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPEN 626
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
+ YV+L+N+YAA G W+D+ +VR +M+ G+ K+ +S IEI
Sbjct: 627 TGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 212/447 (47%), Gaps = 38/447 (8%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV---------- 113
G I+ AR+LF++M ++++N +I Y + G ++ ++F M + +
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 114 ------SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFE 167
M G + + RI ++ R+ NA+++ ++ G++E A +F+
Sbjct: 123 VAKAAGELKSMKLGLVVHGRI------LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFD 176
Query: 168 QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVKNERF 221
M R+VIS+ M+ G+ + G ++ A + D+M ++V + + + G++K+
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
+ V A++ + K G ++ AR +F+R++ +D +++ MI GY +
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
+G E AL L M ++P+ T+ S+ + C +N+G+ H +R +++ +
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVS---WNTIIAAFAQHGHYEKALIFFSQMGL 398
++I+MY++C + +L FR + W+ IIA Q+ AL F +M
Sbjct: 357 ETSLISMYAKCKRV---DLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR 413
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
+P+ T SLL A + ++M++ + K G + S + T LV + S+ G LE
Sbjct: 414 EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLE 472
Query: 459 KAWQITQGMPFE---ADTGVWGSLLAA 482
A +I G+ + D +WG+L++
Sbjct: 473 SAHKIFNGIQEKHKSKDVVLWGALISG 499
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 123/257 (47%), Gaps = 9/257 (3%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
+++ + + G + AR LFE + +S+N +I Y + G+ +A+ +F M+
Sbjct: 51 ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEG 110
Query: 300 MQ--PDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
++ PD T V A L+ + G H ++R+ F + V NA++ MY G +
Sbjct: 111 VKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEM 170
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
+ F + + +++SWNT+I+ + ++G+ AL+ F M D D T +S+L CGH
Sbjct: 171 ARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH 230
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWG 477
+ ++ +L V+ + E LV++ + G++++A + M D W
Sbjct: 231 LKDLEMGRNVHKL-VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITW- 287
Query: 478 SLLAACVINLNVELGEL 494
C+IN E G++
Sbjct: 288 ----TCMINGYTEDGDV 300
Score = 40.8 bits (94), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 97/260 (37%), Gaps = 42/260 (16%)
Query: 18 PPILRILSTPDSCGN-FTPHSSNCL----IRLFSTQYVFVNNAKISALSRAGKISAARQL 72
P + I S CG+ + CL +R + + + IS ++ ++ ++
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAF 132
F + W+AII G QN + ++ LF+ M +++
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV-------------------- 416
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY----TAMLDGFMKKG 188
E N AT N+++ + L +A + + + +S T ++ + K G
Sbjct: 417 -------EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469
Query: 189 EVDKAR----ALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM--PDYDKNVFVVT 242
++ A + + K+VV W +I+GY + A ++F M N T
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFT 529
Query: 243 AMITGFCKVGMLENARLLFE 262
+ + G++E LF
Sbjct: 530 SALNACSHSGLVEEGLTLFR 549
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/630 (30%), Positives = 304/630 (48%), Gaps = 116/630 (18%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV- 109
FV ++ I A GKI +LFD++ KD + WN ++ GY + G L F M +
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 110 ---KNIVSWNCMIAGC--------------------------IDND---------RIDDA 131
N V+++C+++ C I N R DDA
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS--------------- 176
F+ M +T T+N MISG+++ G +EE+ F +M V+
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 177 ------------------------YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+A++D + K V A+ + + +VV +T MI
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 213 TGYVKNERFCEARELFYRM------PD-------------------------------YD 235
+GY+ N + ++ E+F + P+ +D
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
+ A+I + K G + A +FER+ +D VS+N+MI AQ+ A+ +F M
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ D ++ + +AC+ L + G+ H +I++ ++V + +I MY++CG +
Sbjct: 534 GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNL 593
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSA 414
+ F+ + N+VSWN+IIAA HG + +L F +M +G PD ITFL ++S+
Sbjct: 594 KAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653
Query: 415 CGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTG 474
C H G V+E + F M + YGI P EHY C+VD+ RAG+L +A++ + MPF D G
Sbjct: 654 CCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAG 713
Query: 475 VWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
VWG+LL AC ++ NVEL E+A+ K+ +LDP NS YV++SN +A A W VT+VR LMK
Sbjct: 714 VWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMK 773
Query: 535 EQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
E+ V K YSWIEI + H F+ GD++HP
Sbjct: 774 EREVQKIPGYSWIEINKRTHLFVSGDVNHP 803
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 215/444 (48%), Gaps = 34/444 (7%)
Query: 64 GKISAARQLFDQMTTK--DVITWNAIITGYWQNGFLQESKNLFQSMPV----KNIVSWNC 117
G S ++F ++ + + WN+II+ + +NG L ++ + M ++ ++ C
Sbjct: 84 GSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPC 143
Query: 118 MIAGCI---DNDRIDDAFDYFQAMP-ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRN 173
++ C+ + ID D ++ + N +++I +L++G+++ ++LF+++ +++
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 174 VISYTAMLDGFMKKGEVDKA-RALS----DYMSFKNVVSWTVMITGYVKNERFCEAREL- 227
+ + ML+G+ K G +D + S D +S N V++ +++ C ++ L
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS-PNAVTFDCVLS-------VCASKLLI 255
Query: 228 --------FYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
+ D + ++++ + K G ++A LF + D V++N MI+GY
Sbjct: 256 DLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGY 315
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
Q+G+ EE+L F MI + PD T S+ + S + L +Q H ++R+ ++
Sbjct: 316 VQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI 375
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
+ +A+I Y +C G+ ++ F Q +S ++V + +I+ + +G Y +L F +
Sbjct: 376 FLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV 435
Query: 400 GFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEK 459
P+ IT +S+L G + +L ++K G ++D+ ++ G++
Sbjct: 436 KISPNEITLVSILPVIGILLALKLGRELHGFIIK-KGFDNRCNIGCAVIDMYAKCGRMNL 494
Query: 460 AWQITQGMPFEADTGVWGSLLAAC 483
A++I + + + D W S++ C
Sbjct: 495 AYEIFERLS-KRDIVSWNSMITRC 517
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 176/382 (46%), Gaps = 21/382 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ +A I A + +S A+ +F Q + DV+ + A+I+GY NG +S +F+ + V
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL-V 433
Query: 110 KNIVSWNCM-------IAGCIDNDRIDDAFDYF--QAMPERNTATYNAMISGFLKHGRLE 160
K +S N + + G + ++ F + + A+I + K GR+
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK--- 217
A +FE++ +R+++S+ +M+ + A + M + V I+ +
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 218 ---NERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
+E F +A F +V+ + +I + K G L+ A +F+ ++ K+ VS+N+
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNS 613
Query: 275 MIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEG-RQSHVLVIR 332
+IA +G +++L LF M+ K ++PD T + + ++C + ++EG R +
Sbjct: 614 IIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTED 673
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHGHYEKALI 391
G + V+ ++ R G + ++ + + P+ W T++ A H + E A +
Sbjct: 674 YGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEV 733
Query: 392 FFSQMGLNGFDPDGITFLSLLS 413
S+ L DP + L+S
Sbjct: 734 ASSK--LMDLDPSNSGYYVLIS 753
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 8/251 (3%)
Query: 235 DKNVFVVTAMITGFCKVG-MLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D+ + + AM F G M L I+P +N++I+ + +NG+ +AL +
Sbjct: 73 DERILGMYAMCGSFSDCGKMFYRLDLRRSSIRP-----WNSIISSFVRNGLLNQALAFYF 127
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M+ + PD +T + AC AL+ V G + N V +++I Y G
Sbjct: 128 KMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYG 187
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I F ++ + V WN ++ +A+ G + + FS M ++ P+ +TF +LS
Sbjct: 188 KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS 247
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
C ++ + L L+V V G+ L+ + S+ G+ + A ++ + M ADT
Sbjct: 248 VCASKLLIDLGVQLHGLVV-VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADT 305
Query: 474 GVWGSLLAACV 484
W +++ V
Sbjct: 306 VTWNCMISGYV 316
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ--IHS 367
+ ACS LL +G+Q H +I N + ++ MY+ CG D F + +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++ WN+II++F ++G +AL F+ +M G PD TF L+ AC
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 29 SCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRAGKISAARQLFDQMTTKDVIT 83
+C N S I F ++ V+ + I ++ G + AA +F M K++++
Sbjct: 551 ACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS 610
Query: 84 WNAIITGYWQNGFLQESKNLFQSMPVK-----NIVSWNCMIAGCIDNDRIDDAFDYFQAM 138
WN+II +G L++S LF M K + +++ +I+ C +D+ +F++M
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
Query: 139 PER-----NTATYNAMISGFLKHGRLEEATRLFEQMP 170
E Y ++ F + GRL EA + MP
Sbjct: 671 TEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP 707
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/438 (36%), Positives = 263/438 (60%), Gaps = 10/438 (2%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
E + N +I+ + K G +E A ++F+ M R+++S+ M+ G + ++ + AL +
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMI-GLYTRNRME-SEALDIF 150
Query: 200 MSFKN--------VVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKV 251
+ +N +S + G + C+ D N++V TA++ + K
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 252 GMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVF 311
GM+++A +FE +Q K V++++M+AGY QN EEAL L+ +M ++ + TL SV
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 312 TACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLV 371
ACS L L EG+Q H ++ ++GF +NV V ++ + MY++CG + +S + F ++ NL
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
WNTII+ FA+H ++ +I F +M +G P+ +TF SLLS CGH G V E F+LM
Sbjct: 331 LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Query: 432 VKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVEL 491
YG+ P+ HY+C+VDIL RAG L +A+++ + +PF+ +WGSLLA+C + N+EL
Sbjct: 391 RTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLEL 450
Query: 492 GELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGN 551
E+AA+K+ EL+P+N+ +V+LSN+YAA W ++ + R L+++ V K SWI+I +
Sbjct: 451 AEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKD 510
Query: 552 KVHYFLGGDMSHPCIDKI 569
KVH F G+ HP I +I
Sbjct: 511 KVHTFSVGESGHPRIREI 528
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 175/365 (47%), Gaps = 16/365 (4%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR+ V + N I+A S+ G + ARQ+FD M + +++WN +I Y +N E+
Sbjct: 87 IIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEA 146
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRID-DAFD-------YFQAMPERNTATYNAMISG 152
++F M + I+ + ++ DA + + + N A++
Sbjct: 147 LDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDL 206
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL---SDYMSF-KNVVSW 208
+ K G +++A ++FE M ++ +++++M+ G+++ ++A L + MS +N +
Sbjct: 207 YAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTL 266
Query: 209 TVMITGYVKNERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQP 266
+ +I E +++ + + NVFV ++ + + K G L + ++F +Q
Sbjct: 267 SSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE 326
Query: 267 KDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
K+ +N +I+G+A++ +E + LF M + M P++ T S+ + C L+ EGR+
Sbjct: 327 KNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386
Query: 327 HVLVIRN-GFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTIIAAFAQHG 384
L+ G NV + ++ + R G + ++ + I P W +++A+ +
Sbjct: 387 FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYK 446
Query: 385 HYEKA 389
+ E A
Sbjct: 447 NLELA 451
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
D + +V ++ +I + K G +E AR +F+ + + VS+N MI Y +N + EAL +F
Sbjct: 91 DLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIF 150
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M + + T+ SV +AC E ++ H L ++ + N+ V A++ +Y++C
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I D+ F + + V+W++++A + Q+ +YE+AL+ + + + + T S++
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
AC + + E + ++ K G + + VD+ ++ G L +++ I + E +
Sbjct: 271 CACSNLAALIEGKQMHAVICK-SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ-EKN 328
Query: 473 TGVWGSLLAA 482
+W ++++
Sbjct: 329 LELWNTIISG 338
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 7/214 (3%)
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
+ C+ + E + H +IR E +V++ N +I YS+CG + + F + +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
LVSWNT+I + ++ +AL F +M GF T S+LSACG E L
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
L VK I + T L+D+ ++ G ++ A Q+ + M + + W S++A V N N
Sbjct: 187 LSVKT-CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKNY 244
Query: 490 ELGELAAKKMRELD-PQN----SAVYVMLSNLYA 518
E L ++ + + QN S+V SNL A
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 278
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 281/555 (50%), Gaps = 46/555 (8%)
Query: 38 SNCLIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFL 97
S C ++ ++ A++S+LS + DV N++I Y+ G L
Sbjct: 125 SQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG--MAVKSAVGSDVFVANSLIHCYFSCGDL 182
Query: 98 QESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFL--- 154
+ +F ++ K++VSWN MI G + D A + F+ M + + + G L
Sbjct: 183 DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 242
Query: 155 ------KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
+ GR + + + E N+ AMLD + K G ++ A+ L D M K+ V+W
Sbjct: 243 AKIRNLEFGR-QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
T M+ GY +E + ARE+ MP KD
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQ---------------------------------KD 328
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGM-IKMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
V++NA+I+ Y QNG EAL +F + ++ +M+ + TLVS +AC+ + L GR H
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
+ ++G N V +A+I MYS+CG + S F + ++ W+ +I A HG
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+A+ F +M P+G+TF ++ AC H G V+E+ LF M YGI+P +HY C+
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
VD+L R+G LEKA + + MP T VWG+LL AC I+ N+ L E+A ++ EL+P+N
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 568
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
+V+LSN+YA G W +V+ +R M+ G+ K+ S IEI +H FL GD +HP +
Sbjct: 569 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 628
Query: 568 KIHLELKRASVQMKS 582
K++ +L ++KS
Sbjct: 629 KVYGKLHEVMEKLKS 643
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 18/281 (6%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
Y + A ++ F LE AR +F+ I + ++N +I YA ++ F
Sbjct: 63 YSASKLFAMAALSSFAS---LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFL 119
Query: 294 GMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
M+ + P+ T + A + + L+ G+ H + +++ ++V V N++I Y C
Sbjct: 120 DMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC 179
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G + + F I ++VSWN++I F Q G +KAL F +M +T + +L
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 413 SACGHAGKVNESMD----LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMP 468
SAC + + E V V + ++ ++D+ ++ G +E A ++ M
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANA-----MLDMYTKCGSIEDAKRLFDAME 294
Query: 469 FEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV 509
E D W ++L I+ + E AA+++ PQ V
Sbjct: 295 -EKDNVTWTTMLDGYAISEDYE----AAREVLNSMPQKDIV 330
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 306 bits (783), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 280/511 (54%), Gaps = 38/511 (7%)
Query: 80 DVITWNAIITGYWQ---NGFLQESKNLFQSMPVKNIVSWNCMIAG--CIDNDRIDDAFDY 134
D+ T NA++ Y + G N+F MP + S + + CI ID
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP----RRNVISYTAMLDGFMKKGEV 190
F+ MP ++ +YN +I+G+ + G E+A R+ +M + + + +++L F + +V
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 191 DKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCK 250
K + + Y+ K + D +V++ ++++ + K
Sbjct: 259 IKGKEIHGYVIRKGI-----------------------------DSDVYIGSSLVDMYAK 289
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+E++ +F R+ +D +S+N+++AGY QNG EALRLF M+ ++P SV
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV 349
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
AC+ L L+ G+Q H V+R GF +N+ + +A++ MYS+CG I + F +++ +
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFEL 430
VSW II A HGH +A+ F +M G P+ + F+++L+AC H G V+E+ F
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 431 MVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE 490
M KVYG+ EHY + D+L RAG+LE+A+ M E VW +LL++C ++ N+E
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLE 529
Query: 491 LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIG 550
L E A+K+ +D +N YV++ N+YA+ G W+++ ++RL M+++G+ K+ A SWIE+
Sbjct: 530 LAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMK 589
Query: 551 NKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
NK H F+ GD SHP +DKI+ LK QM+
Sbjct: 590 NKTHGFVSGDRSHPSMDKINEFLKAVMEQME 620
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 152/378 (40%), Gaps = 99/378 (26%)
Query: 66 ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----------------PV 109
I + R++F+ M KDV+++N II GY Q+G +++ + + M P+
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 110 ----------KNIVSWNCMIAGCIDND---------------RIDDAFDYFQAMPERNTA 144
K I + +I ID+D RI+D+ F + R+
Sbjct: 252 FSEYVDVIKGKEIHGY--VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPR--------------------------------- 171
++N++++G++++GR EA RLF QM
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 172 ------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEAR 225
N+ +A++D + K G + AR + D M+ + VSWT +I G+ + EA
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 226 ELFYRMP--DYDKNVFVVTAMITGFCKVGMLENARLLFERIQP-----KDCVSFNAMIAG 278
LF M N A++T VG+++ A F + ++ + A+
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSA---LQLLNEGRQSHVLVIRNGF 335
+ G EEA S KM ++P + ++ ++CS L+L + + V
Sbjct: 490 LGRAGKLEEAYNFIS---KMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENM 546
Query: 336 EANVSVCNAVITMYSRCG 353
A V +CN MY+ G
Sbjct: 547 GAYVLMCN----MYASNG 560
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+F+ +A + S+ G I AAR++FD+M D ++W AII G+ +G E+ +LF+ M
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMPE-----RNTATYNAMISGFLKHGRLE 160
+ N V++ ++ C +D+A+ YF +M + + Y A+ + G+LE
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 161 EATRLFEQM---PRRNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVSWTVMITG 214
EA +M P +V ++ +L ++ A +++ + +N+ ++ +M
Sbjct: 498 EAYNFISKMCVEPTGSV--WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 215 YVKNERFCEARELFYRM 231
Y N R+ E +L RM
Sbjct: 556 YASNGRWKEMAKLRLRM 572
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 38/262 (14%)
Query: 261 FERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
F+ ++ +++ ++I + + +AL F M PD SV +C+ + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 321 NEGRQSHVLVIRNGFEANVSVCNAVITMYSR---------CGGILDS------------- 358
G H ++R G + ++ NA++ MY++ G + D
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 359 --------------ELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
F + ++VS+NTIIA +AQ G YE AL +MG PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 405 GITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQIT 464
T S+L V + ++ +++ GI + LVD+ +++ ++E + ++
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIR-KGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 465 QGMPFEADTGVWGSLLAACVIN 486
+ + D W SL+A V N
Sbjct: 301 SRL-YCRDGISWNSLVAGYVQN 321
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 112/251 (44%), Gaps = 26/251 (10%)
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
M A + ++ + ++ ++ +Q H IR ++ S + VI++Y+ + ++
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEAL 59
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
L F+ + SP +++W ++I F + KAL F +M +G PD F S+L +C
Sbjct: 60 LLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSC---- 115
Query: 420 KVNESMDLFELMVKVYGIIP----SSEHYTCLVDILSRAGQLEKAWQITQGMPFE----- 470
MDL V+G I + YT + A L +I+ G F+
Sbjct: 116 --TMMMDL-RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQR 172
Query: 471 -ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAV-YVMLSNLYAAAGMWRDVTR 528
+++G C++ ++ + +++ E+ P+ V Y + YA +GM+ D R
Sbjct: 173 TSNSGDEDVKAETCIMPFGID----SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALR 228
Query: 529 VRLLMKEQGVT 539
+++E G T
Sbjct: 229 ---MVREMGTT 236
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 305 bits (780), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 277/530 (52%), Gaps = 45/530 (8%)
Query: 97 LQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKH 156
+ E++ +F MP +++VSWN ++AG N A + ++M E N I L
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 157 G---RLEEATRLFEQMPRRN-----VISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
RL + R+ V TA++D + K G ++ AR L D M +NVVSW
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 209 TVMITGYVKNERFCEARELFYRMPD----------------------------------- 233
MI YV+NE EA +F +M D
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 234 --YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRL 291
D+NV VV ++I+ +CK ++ A +F ++Q + VS+NAMI G+AQNG +AL
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 292 FSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSR 351
FS M ++PD T VSV TA + L + + + H +V+R+ + NV V A++ MY++
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 352 CGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSL 411
CG I+ + L F + ++ +WN +I + HG + AL F +M P+G+TFLS+
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEA 471
+SAC H+G V + F +M + Y I S +HY +VD+L RAG+L +AW MP +
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605
Query: 472 DTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRL 531
V+G++L AC I+ NV E AA+++ EL+P + +V+L+N+Y AA MW V +VR+
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 665
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
M QG+ K S +EI N+VH F G +HP KI+ L++ +K
Sbjct: 666 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 161/292 (55%), Gaps = 6/292 (2%)
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV--- 205
++S F ++G ++EA R+FE + + + Y ML GF K ++DKA M + +V
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 206 ---VSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
++ + + G R + + ++F +T + + K + AR +F+
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
R+ +D VS+N ++AGY+QNG+A AL + M + +++P T+VSV A SAL+L++
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G++ H +R+GF++ V++ A++ MY++CG + + F + N+VSWN++I A+ Q
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+ + ++A++ F +M G P ++ + L AC G + + +L V++
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 191/383 (49%), Gaps = 18/383 (4%)
Query: 48 QYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM 107
Q F +S R G + A ++F+ + +K + ++ ++ G+ + L ++ F M
Sbjct: 67 QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM 126
Query: 108 ------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISG----FLKHG 157
PV + ++ ++ C D + + + + + ++G + K
Sbjct: 127 RYDDVEPV--VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCR 184
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGY-- 215
++ EA ++F++MP R+++S+ ++ G+ + G A + M +N+ + I
Sbjct: 185 QVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLP 244
Query: 216 -VKNERFCE-ARELF-YRM-PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
V R +E+ Y M +D V + TA++ + K G LE AR LF+ + ++ VS
Sbjct: 245 AVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS 304
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N+MI Y QN +EA+ +F M+ ++P D +++ AC+ L L GR H L +
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
G + NVSV N++I+MY +C + + F ++ S LVSWN +I FAQ+G AL
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALN 424
Query: 392 FFSQMGLNGFDPDGITFLSLLSA 414
+FSQM PD T++S+++A
Sbjct: 425 YFSQMRSRTVKPDTFTYVSVITA 447
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 162/325 (49%), Gaps = 27/325 (8%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V ++ A + ++ G + ARQLFD M ++V++WN++I Y QN +E+ +FQ M
Sbjct: 271 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 110 KNIVSWNCMIAG----CIDNDRIDDAFDYFQAMPE----RNTATYNAMISGFLKHGRLEE 161
+ + + + G C D ++ + E RN + N++IS + K ++
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 162 ATRLFEQMPRRNVISYTAMLDGFMKKGE-VD--------KARALS-DYMSFKNVVSWT-- 209
A +F ++ R ++S+ AM+ GF + G +D ++R + D ++ +V++
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 210 VMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
+ IT + K R DKNVFV TA++ + K G + ARL+F+ + +
Sbjct: 451 LSITHHAKWIHGVVMRSCL------DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHV 504
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
++NAMI GY +G + AL LF M K ++P+ T +SV +ACS L+ G + +
Sbjct: 505 TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYM 564
Query: 330 VIRN-GFEANVSVCNAVITMYSRCG 353
+ N E ++ A++ + R G
Sbjct: 565 MKENYSIELSMDHYGAMVDLLGRAG 589
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A + ++ G I AR +FD M+ + V TWNA+I GY +GF + + LF+ M
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLE 160
I V++ +I+ C + ++ F M E + Y AM+ + GRL
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLN 592
Query: 161 EATRLFEQMPRRNVIS-YTAML 181
EA QMP + ++ Y AML
Sbjct: 593 EAWDFIMQMPVKPAVNVYGAML 614
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Query: 314 CSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSW 373
CS+L+ E RQ LV +NG +++++ R G + ++ F I S V +
Sbjct: 47 CSSLK---ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
+T++ FA+ +KAL FF +M + +P F LL CG ++ ++ L+VK
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
G T L ++ ++ Q+ +A ++ MP E D W +++A
Sbjct: 164 -SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAG 210
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 305 bits (780), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 290/540 (53%), Gaps = 34/540 (6%)
Query: 65 KISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCID 124
++ AR++FD+M KD I WN +I+GY +N ES +F +++++ +C +D
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF-----RDLINESCTR---LD 220
Query: 125 NDRIDDAFDYFQAMPERNTA-------------TYNAMISGFL----KHGRLEEATRLFE 167
+ D + E +++ +++GF+ K G+++ + LF
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR 280
Query: 168 QMPRRNVISYTAMLDGFMKKGEVD------KARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ + ++++Y AM+ G+ GE + K LS + + V ++G++
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---L 337
Query: 222 CEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
A + ++ + V TA+ T + K+ +E+AR LF+ K S+NAMI+GY Q
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG+ E+A+ LF M K + P+ T+ + +AC+ L L+ G+ H LV FE+++ V
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
A+I MY++CG I ++ F + N V+WNT+I+ + HG ++AL F +M +G
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517
Query: 402 DPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW 461
P +TFL +L AC HAG V E ++F M+ YG PS +HY C+VDIL RAG L++A
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRAL 577
Query: 462 QITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAG 521
Q + M E + VW +LL AC I+ + L ++K+ ELDP N +V+LSN+++A
Sbjct: 578 QFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADR 637
Query: 522 MWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
+ VR K++ + K Y+ IEIG H F GD SHP + +I+ +L++ +M+
Sbjct: 638 NYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMR 697
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 184/441 (41%), Gaps = 80/441 (18%)
Query: 46 STQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQN----GFLQESK 101
+T + N + R+ IS Q Q+ +++T Q G + ++
Sbjct: 13 TTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYAR 72
Query: 102 NLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS---GF 153
++F S+ ++ +N ++ G N+ + F + + N++TY IS GF
Sbjct: 73 DIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGF 132
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDG--------------FMKKGEVDKARALSDY 199
R + A R VI A++DG + K V+ AR + D
Sbjct: 133 ----RDDRAGR---------VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDR 179
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYD------------------------ 235
M K+ + W MI+GY KNE + E+ ++F + +
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 236 --------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQ 281
+ +V+T I+ + K G ++ LF + D V++NAMI GY
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 282 NGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSV 341
NG E +L LF ++ + +TLVS+ L L+ H +++ F ++ SV
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASV 356
Query: 342 CNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGF 401
A+ T+YS+ I + F + +L SWN +I+ + Q+G E A+ F +M + F
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 402 DPDGITFLSLLSACGHAGKVN 422
P+ +T +LSAC G ++
Sbjct: 417 SPNPVTITCILSACAQLGALS 437
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 18/259 (6%)
Query: 235 DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSG 294
D + + + ++ + K +E+AR +F+R+ KD + +N MI+GY +N + E++++F
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 295 MIKMD-MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
+I + D TL+ + A + LQ L G Q H L + G ++ V I++YS+CG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I FR+ P++V++N +I + +G E +L F ++ L+G T +SL+
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 414 ACGHAGKVNESMDLFELMVKVYG------IIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
GH L+ ++G + + T L + S+ ++E A ++
Sbjct: 331 VSGH----------LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDES 380
Query: 468 PFEADTGVWGSLLAACVIN 486
P E W ++++ N
Sbjct: 381 P-EKSLPSWNAMISGYTQN 398
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 160/410 (39%), Gaps = 83/410 (20%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--- 107
+V IS S+ GKI LF + D++ +NA+I GY NG + S +LF+ +
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 108 -------------PVKNIVSWNCMIAG-CIDN-------------------DRIDDAFDY 134
PV + I G C+ + + I+ A
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKL 376
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEV 190
F PE++ ++NAMISG+ ++G E+A LF +M + N ++ T +L + G +
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL 436
Query: 191 DKARALSDYMSFKNVVS----WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMIT 246
+ + D + + S T +I Y K EAR LF M KN MI+
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT--KKNEVTWNTMIS 494
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
G+ G + A +F + L SG+ P T
Sbjct: 495 GYGLHGQGQEALNIFYEM--------------------------LNSGI-----TPTPVT 523
Query: 307 LVSVFTACSALQLLNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
+ V ACS L+ EG + + ++ R GFE +V ++ + R G L L F +
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGH-LQRALQFIEA 582
Query: 366 HS--PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
S P W T++ A H A + L DPD + + LLS
Sbjct: 583 MSIEPGSSVWETLLGACRIHKDTNLARTVSEK--LFELDPDNVGYHVLLS 630
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ A I ++ G I+ AR+LFD MT K+ +TWN +I+GY +G QE+ N+F M
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMISGFLKHGRLE 160
I V++ C++ C + + + F +M R + Y M+ + G L+
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 161 EATRLFEQM 169
A + E M
Sbjct: 575 RALQFIEAM 583
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 104/227 (45%), Gaps = 3/227 (1%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+ ++ ++T + +G + AR +F +Q D FN ++ G++ N +L +F+
Sbjct: 48 FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFA 107
Query: 294 GMIK-MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ K D++P+ +T +A S + GR H + +G ++ + + + ++ MY +
Sbjct: 108 HLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKF 167
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY-EKALIFFSQMGLNGFDPDGITFLSL 411
+ D+ F ++ + + WNT+I+ + ++ Y E +F + + D T L +
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDI 227
Query: 412 LSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
L A ++ M + L K G T + + S+ G+++
Sbjct: 228 LPAVAELQELRLGMQIHSLATKT-GCYSHDYVLTGFISLYSKCGKIK 273
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 303 bits (777), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 270/455 (59%), Gaps = 8/455 (1%)
Query: 136 QAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK--- 192
+++ R+ + ++ +L+ G A +LF++MP R+++S+ +++ G+ +G + K
Sbjct: 59 KSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFE 118
Query: 193 --ARALSDYMSFK-NVVSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITG 247
+R + + F+ N V++ MI+ V E R + + + + V VV A I
Sbjct: 119 VLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINW 178
Query: 248 FCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATL 307
+ K G L ++ LFE + K+ VS+N MI + QNG+AE+ L F+ ++ +PD AT
Sbjct: 179 YGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATF 238
Query: 308 VSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS 367
++V +C + ++ + H L++ GF N + A++ +YS+ G + DS F +I S
Sbjct: 239 LAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITS 298
Query: 368 PNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDL 427
P+ ++W ++AA+A HG A+ F M G PD +TF LL+AC H+G V E
Sbjct: 299 PDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHY 358
Query: 428 FELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINL 487
FE M K Y I P +HY+C+VD+L R+G L+ A+ + + MP E +GVWG+LL AC +
Sbjct: 359 FETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYK 418
Query: 488 NVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWI 547
+ +LG AA+++ EL+P++ YVMLSN+Y+A+G+W+D +R+R LMK++G+ + S+I
Sbjct: 419 DTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYI 478
Query: 548 EIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKS 582
E GNK+H F+ GD SHP +KI +LK +MKS
Sbjct: 479 EHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKS 513
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 162/362 (44%), Gaps = 28/362 (7%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+++ S ++ F+ + + R G A +LFD+M +D+++WN++I+GY G+L +
Sbjct: 57 VVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKC 116
Query: 101 KNLFQSMPVK------NIVSWNCMIAGCI------DNDRIDDAFDYFQAMPERNTATYNA 148
+ M + N V++ MI+ C+ + I F + E NA
Sbjct: 117 FEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEE--VKVVNA 174
Query: 149 MISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
I+ + K G L + +LFE + +N++S+ M+ ++ G +K A Y + V
Sbjct: 175 FINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLA---YFNMSRRVGH 231
Query: 209 TVMITGYVKNERFCEAREL---------FYRMPDYDKNVFVVTAMITGFCKVGMLENARL 259
++ R CE + + N + TA++ + K+G LE++
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSST 291
Query: 260 LFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQL 319
+F I D +++ AM+A YA +G +A++ F M+ + PD T + ACS L
Sbjct: 292 VFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGL 351
Query: 320 LNEGRQS-HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI-HSPNLVSWNTII 377
+ EG+ + R + + + ++ + R G + D+ +++ P+ W ++
Sbjct: 352 VEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Query: 378 AA 379
A
Sbjct: 412 GA 413
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 100/191 (52%), Gaps = 10/191 (5%)
Query: 305 ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQ 364
++L++ +C +++L R H V+++ + + + ++ Y R G + +E F +
Sbjct: 35 SSLIAAVKSCVSIELC---RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 365 IHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN--GFDPDGITFLSLLSACGHAGKVN 422
+ +LVSWN++I+ ++ G+ K S+M ++ GF P+ +TFLS++SAC + G
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
E + L++K +G++ + ++ + G L + ++ + + + + W +++
Sbjct: 152 EGRCIHGLVMK-FGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMI-- 207
Query: 483 CVINLNVELGE 493
VI+L L E
Sbjct: 208 -VIHLQNGLAE 217
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 302 bits (774), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 188/588 (31%), Positives = 301/588 (51%), Gaps = 70/588 (11%)
Query: 36 HSSNCLIRLFSTQYVFVNNAKISALSRAGK-ISAARQLFDQMTTKDVITWNAIITGYWQN 94
H+ I L +T Y + LS + + A +F + +++ WN + G+
Sbjct: 53 HAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH--- 109
Query: 95 GFLQESKNLFQSMPVKNIVSWNCMIA-GCIDNDRI----------DDAFDYFQAMP---- 139
S PV + + CMI+ G + N AF Q +
Sbjct: 110 --------ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 140 ----ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+ + + ++IS ++++GRLE+A ++F++ P R+V+SYTA++ G+ +G ++ A+
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD---------------- 233
L D + K+VVSW MI+GY + + EA ELF M PD
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 234 ---------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+ N+ +V A+I + K G LE A LFER+ KD +S+N +I G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR--NGFE 336
Y + +EAL LF M++ P+D T++S+ AC+ L ++ GR HV + + G
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
S+ ++I MY++CG I + F I +L SWN +I FA HG + + FS+M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G PD ITF+ LLSAC H+G ++ +F M + Y + P EHY C++D+L +G
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGL 521
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
++A ++ M E D +W SLL AC ++ NVELGE A+ + +++P+N YV+LSN+
Sbjct: 522 FKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 581
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHP 564
YA+AG W +V + R L+ ++G+ K S IEI + VH F+ GD HP
Sbjct: 582 YASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 629
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 240/538 (44%), Gaps = 93/538 (17%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
++V+ + IS + G++ A ++FD+ +DV+++ A+I GY G+++ ++ LF +PV
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNT----ATYNAMISGFLKHGRLEEATRL 165
K++VSWN MI+G + +A + F+ M + N +T ++S + G +E ++
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 166 F----EQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERF 221
+ N+ A++D + K GE++ A L + + +K+V+SW +I GY +
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY 348
Query: 222 CEARELFYRM------PD--------------------------YDKNVFVV-------T 242
EA LF M P+ DK + V T
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 243 AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQP 302
++I + K G +E A +F I K S+NAMI G+A +G A+ + LFS M K+ +QP
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 303 DDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAF 362
DD T V + +ACS +L+ GR + R TM D ++
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRH----IFR--------------TMTQ------DYKM-- 502
Query: 363 RQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVN 422
+P L + +I G +++A + M + PDG+ + SLL AC G V
Sbjct: 503 ----TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEME---PDGVIWCSLLKACKMHGNVE 555
Query: 423 ESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAW-QITQGMPFEADTGVWGSLLA 481
E ++K+ P S Y L +I + AG+ W ++ + D G+ +
Sbjct: 556 LGESFAENLIKIEPENPGS--YVLLSNIYASAGR----WNEVAKTRALLNDKGM-KKVPG 608
Query: 482 ACVINLNVELGELAAKKMRELDPQNSAVYVMLSN---LYAAAGMWRDVTRVRLLMKEQ 536
I ++ + E + P+N +Y ML L AG D + V M+E+
Sbjct: 609 CSSIEIDSVVHEFIIGD--KFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEE 664
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 183/560 (32%), Positives = 295/560 (52%), Gaps = 30/560 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+FV NA + ++ G + ARQ+F++M +D +TWN II Y Q+ E+ +LF+ M +
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----------ERNTATYNAMISGFLKHGRL 159
IVS +A + +Q +R+ T +++I + K G +
Sbjct: 523 CGIVSDGACLASTLKA--CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580
Query: 160 EEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTVMITGY 215
++A ++F +P +V+S A++ G+ + +++A L M + V +++ ++
Sbjct: 581 KDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENAR-------LLFERIQPKD 268
K E + ++ K F G +GM N+R L E PK
Sbjct: 640 HKPESLTLGTQFHGQIT---KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHV 328
V + M++G++QNG EEAL+ + M + PD AT V+V CS L L EGR H
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 329 LVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYE 387
L+ + + N +I MY++CG + S F ++ N+VSWN++I +A++G+ E
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
AL F M + PD ITFL +L+AC HAGKV++ +FE+M+ YGI +H C+
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACM 876
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNS 507
VD+L R G L++A + + D +W SLL AC I+ + GE++A+K+ EL+PQNS
Sbjct: 877 VDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNS 936
Query: 508 AVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCID 567
+ YV+LSN+YA+ G W +R +M+++GV K YSWI++ + H F GD SH I
Sbjct: 937 SAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIG 996
Query: 568 KIHLELKRASVQMKSVDDFV 587
KI + L+ MK DD V
Sbjct: 997 KIEMFLEDLYDLMK--DDAV 1014
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 228/499 (45%), Gaps = 86/499 (17%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG----FLQESKNLFQSM 107
+ NA + ++ ++S A + FD KDV WN++++ Y G L+ +LF++
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 108 PVKNIVSWNCMIAGCIDN-----------------------------------DRIDDAF 132
N +++ +++ C DRI DA
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 215
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM----PRRNVISYTAMLDGFMKKG 188
F+ + + NT + + SG++K G EEA +FE+M R + +++ +++ +++ G
Sbjct: 216 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 275
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCE--ARELFYRMPDYD----------- 235
++ AR L MS +VV+W VMI+G+ K R CE A E F+ M
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGK--RGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 236 --------------------------KNVFVVTAMITGFCKVGMLENARLLFERIQPKDC 269
N++V +++++ + K +E A +FE ++ K+
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 270 VSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVL 329
V +NAMI GYA NG + + + LF M DD T S+ + C+A L G Q H +
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 330 VIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKA 389
+I+ N+ V NA++ MY++CG + D+ F ++ + V+WNTII ++ Q + +A
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEA 513
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVD 449
F +M L G DG S L AC H + + + L VK G+ + L+D
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC-GLDRDLHTGSSLID 572
Query: 450 ILSRAGQLEKAWQITQGMP 468
+ S+ G ++ A ++ +P
Sbjct: 573 MYSKCGIIKDARKVFSSLP 591
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 192/376 (51%), Gaps = 21/376 (5%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
I+ R GK+ AR LF +M++ DV+ WN +I+G+ + G + F +M ++ S
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 117 CMIAGCIDNDRIDDAFD-----YFQAMP---ERNTATYNAMISGFLKHGRLEEATRLFEQ 168
+ + I D + +A+ N ++++S + K ++E A ++FE
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV------VSWTVMITGYVKNERFC 222
+ +N + + AM+ G+ GE K L +M K+ ++T +++ +
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMEL--FMDMKSSGYNIDDFTFTSLLSTCAASHDL- 444
Query: 223 EARELFYRM---PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGY 279
E F+ + KN+FV A++ + K G LE+AR +FER+ +D V++N +I Y
Sbjct: 445 EMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSY 504
Query: 280 AQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANV 339
Q+ EA LF M + D A L S AC+ + L +G+Q H L ++ G + ++
Sbjct: 505 VQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDL 564
Query: 340 SVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLN 399
+++I MYS+CG I D+ F + ++VS N +IA ++Q+ + E+A++ F +M
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTR 623
Query: 400 GFDPDGITFLSLLSAC 415
G +P ITF +++ AC
Sbjct: 624 GVNPSEITFATIVEAC 639
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 225/458 (49%), Gaps = 24/458 (5%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I+L ++V ++ +S S+ K+ AA ++F+ + K+ + WNA+I GY NG +
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVM 413
Query: 102 NLFQSMPVK--NI--VSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISGF 153
LF M NI ++ +++ C + ++ + + ++ A NA++ +
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 154 LKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMIT 213
K G LE+A ++FE+M R+ +++ ++ +++ +A L M+ +VS +
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLA 533
Query: 214 GYVKNERFCEARELFYRMPD---------YDKNVFVVTAMITGFCKVGMLENARLLFERI 264
+K C Y+ D+++ +++I + K G++++AR +F +
Sbjct: 534 STLKA---CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Query: 265 QPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGR 324
VS NA+IAGY+QN + EEA+ LF M+ + P + T ++ AC + L G
Sbjct: 591 PEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGT 649
Query: 325 QSHVLVIRNGFEANVSVCN-AVITMYSRCGGILDSELAFRQIHSP-NLVSWNTIIAAFAQ 382
Q H + + GF + +++ MY G+ ++ F ++ SP ++V W +++ +Q
Sbjct: 650 QFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQ 709
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
+G YE+AL F+ +M +G PD TF+++L C + E + L+ + +
Sbjct: 710 NGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
T L+D+ ++ G ++ + Q+ M ++ W SL+
Sbjct: 770 SNT-LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 7/217 (3%)
Query: 320 LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAA 379
L G+ H + G ++ + NA++ +Y++C + +E F + ++ +WN++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
++ G K L F + N P+ TF +LS C V + M+K+ G+
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM-GLER 193
Query: 440 SSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKM 499
+S LVD+ ++ ++ A ++ + + + +T W L + V E L ++M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 500 R-ELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
R E + +V + N Y G +D RLL E
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKD---ARLLFGE 286
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 302 bits (773), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 302/547 (55%), Gaps = 18/547 (3%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV---- 109
N I + + G++ AA +LF+ M K++I+W +++GY QN +E+ LF SM
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDY----FQAMPERNTATYNAMISGFLKHGRLEEATRL 165
++ + + ++ C + +A ++ N++I + K L +A ++
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 166 FEQMPRRNVISYTAMLDGFMKKG---EVDKARALSDYMSFK----NVVSWTVMITGYVKN 218
F+ +V+ + AM++G+ + G E+ +A + M F+ +++++ ++
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
Query: 219 ERFCEARELFYRMPDYDKN--VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMI 276
++++ M Y N +F +A+I + L+++RL+F+ ++ KD V +N+M
Sbjct: 468 TSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527
Query: 277 AGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFE 336
AGY Q EEAL LF + +PD+ T ++ TA L + G++ H +++ G E
Sbjct: 528 AGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Query: 337 ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM 396
N + NA++ MY++CG D+ AF S ++V WN++I+++A HG +KAL +M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Query: 397 GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
G +P+ ITF+ +LSAC HAG V + + FELM++ +GI P +EHY C+V +L RAG+
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGR 706
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNL 516
L KA ++ + MP + VW SLL+ C NVEL E AA+ DP++S + MLSN+
Sbjct: 707 LNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNI 766
Query: 517 YAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRA 576
YA+ GMW + +VR MK +GV K+ SWI I +VH FL D SH ++I+ L
Sbjct: 767 YASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Query: 577 SVQMKSV 583
VQ++ V
Sbjct: 827 LVQIRGV 833
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 205/456 (44%), Gaps = 53/456 (11%)
Query: 80 DVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP 139
D N +I Y + G + ++ +F+ MP +N+VSW+ M++ C + +++ F
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 140 ERNTATYNAMI--------SGFLKHGR---LEEATRLFEQMPRRNVISYTAMLDGFMKKG 188
+ N I SG GR + + L + R+V T ++D ++K G
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197
Query: 189 EVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------PD--------- 233
+D AR + D + K+ V+WT MI+G VK R + +LFY++ PD
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
Query: 234 ----------------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS 271
+ + ++ +I + K G + A LF + K+ +S
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+ +++GY QN + +EA+ LF+ M K ++PD S+ T+C++L L G Q H I
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHG---HYEK 388
+ + V N++I MY++C + D+ F + ++V +N +I +++ G +
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE 437
Query: 389 ALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLV 448
AL F M P +TF+SLL A + S + LM K YG+ + L+
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALI 496
Query: 449 DILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
D+ S L+ + + M + D +W S+ A V
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYV 531
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 210/450 (46%), Gaps = 19/450 (4%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V+V I + G I AR +FD + K +TW +I+G + G S LF +
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEE 161
N+V +++ + I + + + E + + N +I ++K GR+
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 162 ATRLFEQMPRRNVISYTAMLDGF----MKKGEVDKARALSDYMSFKNVVSWTVMIT--GY 215
A +LF MP +N+IS+T +L G+ + K ++ ++S + ++ + + ++T
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 216 VKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ F + + + +V ++I + K L +AR +F+ D V FNAM
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 276 IAGYAQNGVA---EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
I GY++ G EAL +F M ++P T VS+ A ++L L +Q H L+ +
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
G ++ +A+I +YS C + DS L F ++ +LV WN++ A + Q E+AL
Sbjct: 483 YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNL 542
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
F ++ L+ PD TF ++++A G+ V + ++K G+ + L+D+ +
Sbjct: 543 FLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK-RGLECNPYITNALLDMYA 601
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+ G E A + D W S++++
Sbjct: 602 KCGSPEDAHKAFDSAA-SRDVVCWNSVISS 630
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 153/286 (53%), Gaps = 9/286 (3%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA------ 193
E +T N +I+ + + G + A ++FE+MP RN++S++ M+ G +++
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 194 --RALSDYMSFKNVVSWTVMITGYVKNERFCEAR-ELFYRMPDYDKNVFVVTAMITGFCK 250
R D + + S+ +G R+ + + F +D++V+V T +I + K
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
G ++ ARL+F+ + K V++ MI+G + G + +L+LF +++ ++ PD L +V
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 311 FTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNL 370
+ACS L L G+Q H ++R G E + S+ N +I Y +CG ++ + F + + N+
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 371 VSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG 416
+SW T+++ + Q+ +++A+ F+ M G PD S+L++C
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 137/337 (40%), Gaps = 56/337 (16%)
Query: 14 RILFPPILRILSTPDSCGNFTPHSSNCLIRLFSTQY-----VFVNNAKISALSRAGKISA 68
R++ P +L +S + + T + I +Y +F +A I S +
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 69 ARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM------PVKNIVSWNCMIAGC 122
+R +FD+M KD++ WN++ GY Q +E+ NLF + P + + AG
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 123 IDNDRIDDAF--DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAM 180
+ + ++ F + E N NA++ + K G E+A + F+ R+V+ + ++
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 181 LDGFMKKGEVDKARAL----------SDYMSFKNVVS----------------------- 207
+ + GE KA + +Y++F V+S
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGI 687
Query: 208 ------WTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLF 261
+ M++ + R +AREL +MP + V ++++G K G +E A
Sbjct: 688 EPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAI-VWRSLLSGCAKAGNVELAEHAA 746
Query: 262 ERI---QPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
E PKD SF + YA G+ EA ++ M
Sbjct: 747 EMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM 783
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIA 378
LL+ H +I G E + + N +I +YSR GG++ + F ++ NLVSW+T+++
Sbjct: 59 LLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVS 118
Query: 379 AFAQHGHYEKALIFFSQMGLNGFD-PDGITFLSLLSAC-GHAGKVNESMDLFELMVKVYG 436
A HG YE++L+ F + D P+ S + AC G G+ + + + G
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSG 178
Query: 437 IIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
T L+D + G ++ A + +P E T W ++++ CV
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCV 225
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 301 bits (771), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 291/549 (53%), Gaps = 17/549 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VFV A + + + A ++F++M +D TWNA+++G+ Q+G ++ +LF+ M +
Sbjct: 87 VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRL 146
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEE 161
I + + I + + + +AM + N IS + K G L+
Sbjct: 147 NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS 206
Query: 162 ATRLFEQMPR--RNVISYTAMLDGFMKKGEVDKARALSDYM---SFKNVVSWTVMITGYV 216
A +FE + R R V+S+ +M + GE A L M FK +S + +
Sbjct: 207 AKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASC 266
Query: 217 KNERFCEARELFYRMPDY---DKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFN 273
+N L + + D+++ + I+ + K +ARLLF+ + + CVS+
Sbjct: 267 QNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWT 326
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLV-IR 332
MI+GYA+ G +EAL LF MIK +PD TL+S+ + C L G+ I
Sbjct: 327 VMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIY 386
Query: 333 NGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIF 392
NV +CNA+I MYS+CG I ++ F +V+W T+IA +A +G + +AL
Sbjct: 387 GCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKL 446
Query: 393 FSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILS 452
FS+M + P+ ITFL++L AC H+G + + + F +M +VY I P +HY+C+VD+L
Sbjct: 447 FSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLG 506
Query: 453 RAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
R G+LE+A ++ + M + D G+WG+LL AC I+ NV++ E AA+ + L+PQ +A YV
Sbjct: 507 RKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVE 566
Query: 513 LSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLE 572
++N+YAAAGMW R+R +MK++ + K S I++ K H F G+ H + I+
Sbjct: 567 MANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFT 626
Query: 573 LKRASVQMK 581
L S+ K
Sbjct: 627 LNGLSLFAK 635
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+VFV TA + F K ++ A +FER+ +D ++NAM++G+ Q+G ++A LF M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 297 KMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGIL 356
++ PD T++++ + S + L H + IR G + V+V N I+ Y +CG +
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 357 DSELAFRQIHSPN--LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSA 414
++L F I + +VSWN++ A++ G A + M F PD TF++L ++
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 415 C 415
C
Sbjct: 266 C 266
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 158/392 (40%), Gaps = 67/392 (17%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESK 101
I L + Q + N IS S++ +AR LFD MT++ ++W +I+GY + G + E+
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEAL 342
Query: 102 NLFQSM----PVKNIVSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISG 152
LF +M ++V+ +I+GC ++ + DA N NA+I
Sbjct: 343 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDM 402
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMI 212
+ K G + EA +F+ P + V+++ T MI
Sbjct: 403 YSKCGSIHEARDIFDNTPEKTVVTW-------------------------------TTMI 431
Query: 213 TGYVKNERFCEARELFYRMP--DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCV 270
GY N F EA +LF +M DY N A++ G LE F ++ +
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 271 S-----FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC----------- 314
S ++ M+ + G EEAL L M +PD ++ AC
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEALELIR---NMSAKPDAGIWGALLNACKIHRNVKIAEQ 548
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+A L N Q + AN+ + ++R I+ + ++ +++ N
Sbjct: 549 AAESLFNLEPQMAAPYVE---MANIYAAAGMWDGFARIRSIM-KQRNIKKYPGESVIQVN 604
Query: 375 TIIAAF--AQHGHYEKALIFFSQMGLNGFDPD 404
+F +HGH E +I+F+ GL+ F D
Sbjct: 605 GKNHSFTVGEHGHVENEVIYFTLNGLSLFAKD 636
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 287 EALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVI 346
E+L LF M + +P++ T V AC+ L + H +I++ F ++V V A +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 347 TMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGI 406
M+ +C + + F ++ + +WN +++ F Q GH +KA F +M LN PD +
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 407 TFLSLLSACGHAGKVNESMDLFELMVKV 434
T ++L+ + +S+ L E M V
Sbjct: 155 TVMTLI----QSASFEKSLKLLEAMHAV 178
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 10/149 (6%)
Query: 372 SWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELM 431
+WN I ++L+ F +M GF+P+ TF + AC V + +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 432 VKVYGIIPS-SEHY--TCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
+K P S+ + T VD+ + ++ A ++ + MP E D W ++L+ + +
Sbjct: 79 IKS----PFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP-ERDATTWNAMLSGFCQSGH 133
Query: 489 VELGELAAKKMR--ELDPQNSAVYVMLSN 515
+ ++MR E+ P + V ++ +
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQS 162
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 270/472 (57%), Gaps = 13/472 (2%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
M A C RI+ A + F M R+ T+N MI + + G ++EA +LFE+M NV+
Sbjct: 155 MYASC---GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 178 TAMLDGFM----KKGEVDKARALSDYMSFKNVVS----WTVMITGYVKNERFCEARELFY 229
+L + + G + RA+ +++ +V T ++T Y ARE F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 230 RMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEAL 289
+M +N+FV TAM++G+ K G L++A+++F++ + KD V + MI+ Y ++ +EAL
Sbjct: 272 KMSV--RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEAL 329
Query: 290 RLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMY 349
R+F M ++PD ++ SV +AC+ L +L++ + H + NG E+ +S+ NA+I MY
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 350 SRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFL 409
++CGG+ + F ++ N+VSW+++I A + HG AL F++M +P+ +TF+
Sbjct: 390 AKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 410 SLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPF 469
+L C H+G V E +F M Y I P EHY C+VD+ RA L +A ++ + MP
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV 509
Query: 470 EADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
++ +WGSL++AC I+ +ELG+ AAK++ EL+P + V++SN+YA W DV +
Sbjct: 510 ASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNI 569
Query: 530 RLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
R +M+E+ V K+ S I+ K H FL GD H ++I+ +L ++K
Sbjct: 570 RRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLK 621
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 191/410 (46%), Gaps = 49/410 (11%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV + + G+I+ AR +FD+M+ +DV+TWN +I Y + G + E+ LF+ M
Sbjct: 147 FVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDS 206
Query: 111 NIVSWNCMIAGCIDNDRIDDAFDYFQAMPE--------RNTATYNAMISGFLKHGRLEEA 162
N++ ++ + Y +A+ E +T A+++ + G ++ A
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA 266
Query: 163 TRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
F +M RN+ TAM+ G+ K G +D A+ + D K++V WT MI+ YV+++
Sbjct: 267 REFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQ 326
Query: 223 EARELFYRM------PD----------------YDKNVFVVT---------------AMI 245
EA +F M PD DK +V + A+I
Sbjct: 327 EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALI 386
Query: 246 TGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA 305
+ K G L+ R +FE++ ++ VS+++MI + +G A +AL LF+ M + +++P++
Sbjct: 387 NMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEV 446
Query: 306 TLVSVFTACSALQLLNEGRQSHV-LVIRNGFEANVSVCNAVITMYSRCGGILDS-ELAFR 363
T V V CS L+ EG++ + + ++ ++ R + ++ E+
Sbjct: 447 TFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIES 506
Query: 364 QIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ N+V W ++++A HG E L F+ + +PD L L+S
Sbjct: 507 MPVASNVVIWGSLMSACRIHGELE--LGKFAAKRILELEPDHDGALVLMS 554
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 128/275 (46%), Gaps = 33/275 (12%)
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
FV T + + G + AR +F+ + +D V++N MI Y + G+ +EA +LF M
Sbjct: 147 FVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDS 206
Query: 299 DMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITM---------- 348
++ PD+ L ++ +AC + R + +I N + + A++TM
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA 266
Query: 349 ---------------------YSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
YS+CG + D+++ F Q +LV W T+I+A+ + + +
Sbjct: 267 REFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQ 326
Query: 388 KALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCL 447
+AL F +M +G PD ++ S++SAC + G ++++ + V G+ L
Sbjct: 327 EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNAL 385
Query: 448 VDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAA 482
+++ ++ G L+ + + MP + W S++ A
Sbjct: 386 INMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINA 419
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 141/285 (49%), Gaps = 23/285 (8%)
Query: 43 RLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKN 102
R S + +FV+ A +S S+ G++ A+ +FDQ KD++ W +I+ Y ++ + QE+
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 103 LFQSMPVK----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISGFL 154
+F+ M ++VS +I+ C + +D A + E + NA+I+ +
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA 390
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV----VSWTV 210
K G L+ +FE+MPRRNV+S+++M++ GE A +L M +NV V++
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 211 MITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGF-CKVGMLENARLLFERIQPKDC 269
++ G + E +++F M D + +T + + C V + A LL E ++ +
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDE----YNITPKLEHYGCMVDLFGRANLLREALEVIES 506
Query: 270 --VSFNAMIAGYAQNGV---AEEALRLFSGMIKMDMQPD-DATLV 308
V+ N +I G + E L F+ ++++PD D LV
Sbjct: 507 MPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALV 551
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 94/202 (46%), Gaps = 1/202 (0%)
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
P + + FN + +++ + + + + + D + + + A S + L EG +
Sbjct: 73 PPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
H + + + V + MY+ CG I + F ++ ++V+WNT+I + + G
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL 192
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
++A F +M + PD + +++SACG G + + ++E +++ + + T
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE-NDVRMDTHLLT 251
Query: 446 CLVDILSRAGQLEKAWQITQGM 467
LV + + AG ++ A + + M
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKM 273
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/556 (30%), Positives = 301/556 (54%), Gaps = 35/556 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
F+ I A S G I+ ARQ+FD + + WNAII GY +N Q++ ++ +M +
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLA 113
Query: 111 NI----VSWNCMIAGC-----IDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEE 161
+ ++ ++ C + R A F+ + + N +I+ + K RL
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHA-QVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 162 ATRLFE--QMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV-VSWTVMITGYVKN 218
A +FE +P R ++S+TA++ + + GE +A + M +V W +++ V N
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVS--VLN 230
Query: 219 ERFC-----EARELFYRM--------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQ 265
C + R + + PD ++ ++ T + K G + A++LF++++
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPD------LLISLNTMYAKCGQVATAKILFDKMK 284
Query: 266 PKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQ 325
+ + +NAMI+GYA+NG A EA+ +F MI D++PD ++ S +AC+ + L + R
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGH 385
+ V R+ + +V + +A+I M+++CG + + L F + ++V W+ +I + HG
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGR 404
Query: 386 YEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT 445
+A+ + M G P+ +TFL LL AC H+G V E F M + I P +HY
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYA 463
Query: 446 CLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
C++D+L RAG L++A+++ + MP + VWG+LL+AC + +VELGE AA+++ +DP
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS 523
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
N+ YV LSNLYAAA +W V VR+ MKE+G+ K SW+E+ ++ F GD SHP
Sbjct: 524 NTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPR 583
Query: 566 IDKIHLELKRASVQMK 581
++I +++ ++K
Sbjct: 584 YEEIERQVEWIESRLK 599
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF+++A I ++ G + AR +FD+ +DV+ W+A+I GY +G +E+ +L+++M
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 110 ----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER----NTATYNAMISGFLKHGRLEE 161
N V++ ++ C + + + + +F M + Y +I + G L++
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 162 ATRLFEQMP-RRNVISYTAMLDGFMKKGEVD 191
A + + MP + V + A+L K V+
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 324 RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQH 383
+Q H ++ G + + + +I S G I + F + P + WN II ++++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 384 GHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEH 443
H++ AL+ +S M L PD TF LL AC +G + M F + +V+ + ++
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKAC--SGLSHLQMGRF-VHAQVFRLGFDADV 154
Query: 444 YT--CLVDILSRAGQLEKAWQITQGMPFEADTGV-WGSLLAACVINLNVELGELAAKKMR 500
+ L+ + ++ +L A + +G+P T V W ++++A N +MR
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 501 ELD 503
++D
Sbjct: 215 KMD 217
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/455 (33%), Positives = 268/455 (58%), Gaps = 7/455 (1%)
Query: 135 FQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE-VDKA 193
Q++ + N +++ + K G LEEA ++FE+MP+R+ +++T ++ G+ + D
Sbjct: 87 LQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL 146
Query: 194 RALSDYMSF---KNVVSWTVMITGYVKNERFCEAREL--FYRMPDYDKNVFVVTAMITGF 248
+ + F N + + +I R C +L F +D NV V +A++ +
Sbjct: 147 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
+ G++++A+L+F+ ++ ++ VS+NA+IAG+A+ E+AL LF GM++ +P +
Sbjct: 207 TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYA 266
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP 368
S+F ACS+ L +G+ H +I++G + N ++ MY++ G I D+ F ++
Sbjct: 267 SLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 369 NLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLF 428
++VSWN+++ A+AQHG ++A+ +F +M G P+ I+FLS+L+AC H+G ++E +
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
ELM K GI+P + HY +VD+L RAG L +A + + MP E +W +LL AC ++ N
Sbjct: 387 ELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 489 VELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIE 548
ELG AA+ + ELDP + +V+L N+YA+ G W D RVR MKE GV K+ A SW+E
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Query: 549 IGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSV 583
I N +H F+ D HP ++I + + ++K +
Sbjct: 506 IENAIHMFVANDERHPQREEIARKWEEVLAKIKEL 540
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 172/390 (44%), Gaps = 55/390 (14%)
Query: 64 GKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCI 123
G+I A + + D++ N ++ Y + G L+E++ +F+ MP ++ V+W +I+G
Sbjct: 79 GRIVHA-HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 124 DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMP--------RRNVI 175
+DR DA +F M + +S +K E Q+ NV
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 176 SYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF------- 228
+A+LD + + G +D A+ + D + +N VSW +I G+ + +A ELF
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 229 -----------------------------YRMPDYDKNV-FVVTAMITGFCKVGMLENAR 258
Y + +K V F ++ + K G + +AR
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 259 LLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQ 318
+F+R+ +D VS+N+++ YAQ+G +EA+ F M ++ ++P++ + +SV TACS
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 319 LLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIH----SPNLVSWN 374
LL+EG + L+ ++G V+ + R G D A R I P W
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG---DLNRALRFIEEMPIEPTAAIWK 434
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPD 404
++ A H + E L ++ + DPD
Sbjct: 435 ALLNACRMHKNTE--LGAYAAEHVFELDPD 462
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 37/277 (13%)
Query: 289 LRLFSGMIKMDMQPDDATLV-SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
LR S ++ P D ++ C+ +LL +GR H ++++ F ++ + N ++
Sbjct: 44 LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN 103
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY++CG + ++ F ++ + V+W T+I+ ++QH AL+FF+QM G+ P+ T
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 408 FLSLLSA-------------------CGHAGKVNESMDLFELMVKVYGIIPSSE------ 442
S++ A CG V+ L +L + YG++ ++
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR-YGLMDDAQLVFDAL 222
Query: 443 ------HYTCLVDILSRAGQLEKAWQITQGM---PFEADTGVWGSLLAACVINLNVELGE 493
+ L+ +R EKA ++ QGM F + SL AC +E G+
Sbjct: 223 ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK 282
Query: 494 -LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRV 529
+ A ++ + + L ++YA +G D ++
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMP- 108
F N + +++G I AR++FD++ +DV++WN+++T Y Q+GF +E+ F+ M
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 109 ---VKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT----YNAMISGFLKHGRLEE 161
N +S+ ++ C + +D+ + Y++ M + Y ++ + G L
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 162 ATRLFEQMP 170
A R E+MP
Sbjct: 417 ALRFIEEMP 425
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 114/272 (41%), Gaps = 34/272 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V +A + +R G + A+ +FD + +++ ++WNA+I G+ + +++ LFQ M
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM-- 253
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMIS-GFLKHGRLEEATRLFEQ 168
D F+ + + A S GFL+ G+ A + +
Sbjct: 254 ---------------------LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY-MIKS 291
Query: 169 MPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF 228
+ + +LD + K G + AR + D ++ ++VVSW ++T Y ++ EA F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 229 YRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS----FNAMIAGYAQN 282
M N +++T G+L+ +E ++ V + ++ +
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
G ALR +M ++P A ++ AC
Sbjct: 412 GDLNRALRFIE---EMPIEPTAAIWKALLNAC 440
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 298 bits (764), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 294/544 (54%), Gaps = 59/544 (10%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----E 140
N ++ Y + G L SK L S +++V+WN +++ N+++ +A +Y + M E
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 141 RNTATYNAMISG-----FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARA 195
+ T ++++ L+ G+ A L N +A++D + +V R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 196 LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD---------------------- 233
+ D M + + W MI GY +NE EA LF M +
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 234 ----------------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIA 277
D++ FV ++ + ++G ++ A +F +++ +D V++N MI
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 278 GYAQNGVAEEALRLF-----------SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQS 326
GY + E+AL L G ++ ++P+ TL+++ +C+AL L +G++
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H I+N +V+V +A++ MY++CG + S F QI N+++WN II A+ HG+
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 387 EKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
++A+ M + G P+ +TF+S+ +AC H+G V+E + +F +M YG+ PSS+HY C
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 447 LVDILSRAGQLEKAWQITQGMPFEAD-TGVWGSLLAACVINLNVELGELAAKKMRELDPQ 505
+VD+L RAG++++A+Q+ MP + + G W SLL A I+ N+E+GE+AA+ + +L+P
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 506 NSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPC 565
++ YV+L+N+Y++AG+W T VR MKEQGV K+ SWIE G++VH F+ GD SHP
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 566 IDKI 569
+K+
Sbjct: 780 SEKL 783
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 171/379 (45%), Gaps = 29/379 (7%)
Query: 132 FDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVD 191
+ F + ERN ++N++IS + E A F M NV
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV----------------- 195
Query: 192 KARALSDYMSFKNVVSWTVMITGYVKNERFCEARELF-YRMPDYDKNVFVVTAMITGFCK 250
+ SF +VS + E +++ Y + + N F++ ++ + K
Sbjct: 196 ------EPSSF-TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGK 248
Query: 251 VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSV 310
+G L ++++L +D V++N +++ QN EAL M+ ++PD+ T+ SV
Sbjct: 249 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 308
Query: 311 FTACSALQLLNEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
ACS L++L G++ H ++NG + N V +A++ MY C +L F +
Sbjct: 309 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 368
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLN-GFDPDGITFLSLLSACGHAGKVNESMDLF 428
+ WN +IA ++Q+ H ++AL+ F M + G + T ++ AC +G + +
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 428
Query: 429 ELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLN 488
+VK G+ L+D+ SR G+++ A +I M + D W +++ V + +
Sbjct: 429 GFVVK-RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEH 486
Query: 489 VELGELAAKKMRELDPQNS 507
E L KM+ L+ + S
Sbjct: 487 HEDALLLLHKMQNLERKVS 505
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 5/249 (2%)
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
+V V ++ + K G +F+RI ++ VS+N++I+ E AL F M+
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 297 KMDMQPDDATLVSVFTACSALQL---LNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
+++P TLVSV TACS L + L G+Q H +R G E N + N ++ MY + G
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 250
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+ S++ +LV+WNT++++ Q+ +AL + +M L G +PD T S+L
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H + +L +K + +S + LVD+ Q+ ++ GM F+
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKI 369
Query: 474 GVWGSLLAA 482
G+W +++A
Sbjct: 370 GLWNAMIAG 378
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/523 (20%), Positives = 229/523 (43%), Gaps = 38/523 (7%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
+ V V N ++ + G A ++FD+++ ++ ++WN++I+ + + F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 105 QSMPVKNI----VSWNCMIAGCIDNDRID------DAFDYFQAMPERNTATYNAMISGFL 154
+ M +N+ + ++ C + + Y E N+ N +++ +
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYG 247
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
K G+L + L R+++++ +L + ++ +A M + V I+
Sbjct: 248 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 215 YVKN----ERFCEARELF-YRMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ E +EL Y + + D+N FV +A++ +C + + R +F+ + +
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 268 DCVSFNAMIAGYAQNGVAEEALRLFSGMIK-MDMQPDDATLVSVFTACSALQLLNEGRQS 326
+NAMIAGY+QN +EAL LF GM + + + T+ V AC +
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 327 HVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY 386
H V++ G + + V N ++ MYSR G I + F ++ +LV+WNT+I + H+
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 387 EKALIFFSQM-----------GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
E AL+ +M P+ IT +++L +C + + ++ +K
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-N 546
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
+ + LVD+ ++ G L+ + ++ +P + + W ++ A ++ N G+ A
Sbjct: 547 NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQEA 602
Query: 496 AKKMRELDPQ----NSAVYVMLSNLYAAAGMWRDVTRVRLLMK 534
+R + Q N ++ + + +GM + R+ +MK
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
++ ++ + EA+ + MI + ++PD+ ++ A + LQ + G+Q H V + G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 335 FEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFF 393
+ + V+V N ++ +Y +CG F +I N VSWN++I++ +E AL F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 394 SQMGLNGFDPDGITFLSLLSAC 415
M +P T +S+++AC
Sbjct: 188 RCMLDENVEPSSFTLVSVVTAC 209
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
V V +A + ++ G + +R++FDQ+ K+VITWN II Y +G QE+ +L + M V
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 611
Query: 110 K----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLE 160
+ N V++ + A C + +D+ F M E ++ Y ++ + GR++
Sbjct: 612 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 671
Query: 161 EATRLFEQMPR 171
EA +L MPR
Sbjct: 672 EAYQLMNMMPR 682
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 298 bits (763), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 195/651 (29%), Positives = 306/651 (47%), Gaps = 123/651 (18%)
Query: 54 NAKISALSRAGKISAARQLFDQMT---TKDVITWNAIITGYWQNGFLQESKNLFQSMP-- 108
N+ IS S++G + A +F+ M +DV++W+A++ Y NG ++ +F
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 109 --VKNIVSWNCMIAGCIDNDRI-------------------------------------D 129
V N + +I C ++D + +
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF----------EQMPRRNVISYTA 179
+A+ F M E N T+ MI+ ++ G EA R F ++ +V S A
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 180 ---------------------------MLDGFMK---KGEVDKARALSDYMSFKNVVSWT 209
++D + K G VD R + D M +V+SWT
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 210 VMITGYVKNERFC-EARELFYRM-------------------------PDYDKNVF---- 239
+ITGY+KN EA LF M P K V
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 240 ---------VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALR 290
V ++I+ F K +E+A+ FE + K+ VS+N + G +N E+A +
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 291 LFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYS 350
L S + + ++ T S+ + + + + +G Q H V++ G N VCNA+I+MYS
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520
Query: 351 RCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLS 410
+CG I + F + + N++SW ++I FA+HG + L F+QM G P+ +T+++
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580
Query: 411 LLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFE 470
+LSAC H G V+E F M + + I P EHY C+VD+L RAG L A++ MPF+
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 471 ADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVR 530
AD VW + L AC ++ N ELG+LAA+K+ ELDP A Y+ LSN+YA AG W + T +R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700
Query: 531 LLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
MKE+ + K+ SWIE+G+K+H F GD +HP +I+ EL R ++K
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 175/367 (47%), Gaps = 20/367 (5%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPR---RNVISYTAMLDGFMKKG-EVDKARA 195
E ++ YN++IS + K G +A +FE M R R+V+S++AM+ + G E+D +
Sbjct: 94 EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 196 LSDYMSF---KNVVSWTVMITGYVKNERFCEAR---ELFYRMPDYDKNVFVVTAMITGFC 249
+++ N +T +I ++ R + ++ +V V ++I F
Sbjct: 154 FVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 250 K-VGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
K ENA +F+++ + V++ MI Q G EA+R F M+ + D TL
Sbjct: 214 KGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC---GGILDSELAFRQI 365
SVF+AC+ L+ L+ G+Q H IR+G +V +++ MY++C G + D F ++
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 366 HSPNLVSWNTIIAAFAQHGHY-EKALIFFSQMGLNG-FDPDGITFLSLLSACGHAGKVNE 423
+++SW +I + ++ + +A+ FS+M G +P+ TF S ACG+
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 424 SMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAAC 483
+ K G+ +S ++ + ++ ++E A + + + E + + + L
Sbjct: 392 GKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGT 449
Query: 484 VINLNVE 490
NLN E
Sbjct: 450 CRNLNFE 456
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 143/294 (48%), Gaps = 14/294 (4%)
Query: 206 VSWTVMITGYVKNERFCEARELFYRMPDYD--KNVFVVTAMITGFCKVGMLENARLLFE- 262
V+++ ++ ++ F + + R+ ++D + + ++I+ + K G A +FE
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 263 --RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLL 320
R +D VS++AM+A Y NG +A+++F +++ + P+D +V ACS +
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFV 182
Query: 321 NEGRQSHVLVIRNG-FEANVSVCNAVITMYSRCGGILDSEL-AFRQIHSPNLVSWNTIIA 378
GR + +++ G FE++V V ++I M+ + ++ F ++ N+V+W +I
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 379 AFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGII 438
Q G +A+ FF M L+GF+ D T S+ SAC ++ L ++ G++
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIR-SGLV 301
Query: 439 PSSEHYTCLVDILSRA---GQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
E LVD+ ++ G ++ ++ M + W +L+ + N N+
Sbjct: 302 DDVE--CSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITGYMKNCNL 352
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 52 VNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGF----LQESKNLFQSM 107
V NA IS S+ G I A ++F+ M ++VI+W ++ITG+ ++GF L+ + +
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 108 PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMISGFLKHGRLEEA 162
N V++ +++ C + + + +F +M E + Y M+ + G L +A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 163 TRLFEQMP 170
MP
Sbjct: 631 FEFINTMP 638
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/638 (28%), Positives = 303/638 (47%), Gaps = 122/638 (19%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM----- 107
N IS + G +S+AR LFD M + V+TW ++ Y +N E+ LF+ M
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 108 -PVKNIVSWNCMIAGCIDN-------------------------------------DRID 129
+ + V++ ++ GC D R+D
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 130 DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR------------------ 171
A F+ +PE+++ T+N +I+G+ K G E+ LF +M +
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 172 ---------------------RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTV 210
R+ +LD + K V + R L D M + VS+ V
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321
Query: 211 MITGYVKNERFCEARELFYR--------------------------------------MP 232
+I+ Y + +++ EA F+R +
Sbjct: 322 VISSYSQADQY-EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 233 DYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLF 292
D + V +++ + K M E A L+F+ + + VS+ A+I+GY Q G+ L+LF
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 293 SGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRC 352
+ M +++ D +T +V A ++ L G+Q H +IR+G NV + ++ MY++C
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC 500
Query: 353 GGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLL 412
G I D+ F ++ N VSWN +I+A A +G E A+ F++M +G PD ++ L +L
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVL 560
Query: 413 SACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEAD 472
+AC H G V + + F+ M +YGI P +HY C++D+L R G+ +A ++ MPFE D
Sbjct: 561 TACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD 620
Query: 473 TGVWGSLLAACVINLNVELGELAAKKMRELDP-QNSAVYVMLSNLYAAAGMWRDVTRVRL 531
+W S+L AC I+ N L E AA+K+ ++ +++A YV +SN+YAAAG W V V+
Sbjct: 621 EIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKK 680
Query: 532 LMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKI 569
M+E+G+ K AYSW+E+ +K+H F D +HP D+I
Sbjct: 681 AMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEI 718
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 187/388 (48%), Gaps = 47/388 (12%)
Query: 140 ERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDY 199
+ +T N ++ L+ G++ A +++++MP +N +S M+ G +K G+V AR L D
Sbjct: 45 DTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDA 104
Query: 200 MSFKNVVSWTVMITGYVKNERFCEARELFYRM--------PD------------------ 233
M + VV+WT+++ Y +N F EA +LF +M PD
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 234 -------------YDKNVFVVTA--MITGFCKVGMLENARLLFERIQPKDCVSFNAMIAG 278
+D N F+ + ++ +C+V L+ A +LFE I KD V+FN +I G
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 279 YAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEAN 338
Y ++G+ E++ LF M + QP D T V A L G+Q H L + GF +
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 339 VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGL 398
SV N ++ YS+ +L++ + F ++ + VS+N +I++++Q YE +L FF +M
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 399 NGFDPDGITFLSLLSACGHAGKVNESMDLF--ELMVKVYGIIPSSEHYTCLVDILSRAGQ 456
GFD F ++LS + + L L+ I+ LVD+ ++
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG---NSLVDMYAKCEM 401
Query: 457 LEKAWQITQGMPFEADTGVWGSLLAACV 484
E+A I + +P + T W +L++ V
Sbjct: 402 FEEAELIFKSLP-QRTTVSWTALISGYV 428
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 235/517 (45%), Gaps = 67/517 (12%)
Query: 53 NNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNI 112
+N + L R G++SAAR+++D+M K+ ++ N +I+G+ + G + +++LF +MP + +
Sbjct: 51 SNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTV 110
Query: 113 VSWNCMIAGCIDNDRIDDAFDYFQAM--------PERNTATY------------------ 146
V+W ++ N D+AF F+ M P+ T T
Sbjct: 111 VTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVH 170
Query: 147 -----------------NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGE 189
N ++ + + RL+ A LFE++P ++ +++ ++ G+ K G
Sbjct: 171 AFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGL 230
Query: 190 VDKARAL-----------SDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNV 238
++ L SD+ +F V+ V + + ++ + ++
Sbjct: 231 YTESIHLFLKMRQSGHQPSDF-TFSGVLKAVVGLHDFALGQQL----HALSVTTGFSRDA 285
Query: 239 FVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKM 298
V ++ + K + R+LF+ + D VS+N +I+ Y+Q E +L F M M
Sbjct: 286 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 345
Query: 299 DMQPDD---ATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ AT++S+ S+LQ+ GRQ H + ++ + V N+++ MY++C
Sbjct: 346 GFDRRNFPFATMLSIAANLSSLQM---GRQLHCQALLATADSILHVGNSLVDMYAKCEMF 402
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
++EL F+ + VSW +I+ + Q G + L F++M + D TF ++L A
Sbjct: 403 EEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKAS 462
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+ L +++ G + + + LVD+ ++ G ++ A Q+ + MP + +
Sbjct: 463 ASFASLLLGKQLHAFIIR-SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVS 520
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVM 512
W +L++A N + E A KM E Q +V ++
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 109/272 (40%), Gaps = 33/272 (12%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ V N+ + ++ A +F + + ++W A+I+GY Q G LF M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 110 KNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQM 169
N+ + A + + +A++ +++ G H + + L
Sbjct: 446 SNLRADQSTFATVL-----------------KASASFASLLLGKQLHAFIIRSGNL---- 484
Query: 170 PRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFY 229
NV S + ++D + K G + A + + M +N VSW +I+ + N A F
Sbjct: 485 --ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 230 RMPD--YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVS-----FNAMIAGYAQN 282
+M + + + ++T G +E F+ + P ++ + M+ +N
Sbjct: 543 KMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRN 602
Query: 283 GVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
G EA +L M +M +PD+ SV AC
Sbjct: 603 GRFAEAEKL---MDEMPFEPDEIMWSSVLNAC 631
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR + + VF + + ++ G I A Q+F++M ++ ++WNA+I+ + NG + +
Sbjct: 478 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537
Query: 101 KNLFQSMPVKNI----VSWNCMIAGCIDNDRIDDAFDYFQAM-------PERNTATYNAM 149
F M + VS ++ C ++ +YFQAM P++ Y M
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK--HYACM 595
Query: 150 ISGFLKHGRLEEATRLFEQMP 170
+ ++GR EA +L ++MP
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMP 616
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 234/376 (62%), Gaps = 4/376 (1%)
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKD 268
T ++ Y K A+++F RMP+ +++ TAMIT + K G +E AR LF+ + +D
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPE--RSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 269 CVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLNEGRQSH 327
VS+N MI GYAQ+G +AL LF ++ + +PD+ T+V+ +ACS + L GR H
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 328 VLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYE 387
V V + NV VC +I MYS+CG + ++ L F ++V+WN +IA +A HG+ +
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342
Query: 388 KALIFFSQM-GLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTC 446
AL F++M G+ G P ITF+ L AC HAG VNE + +FE M + YGI P EHY C
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC 402
Query: 447 LVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQN 506
LV +L RAGQL++A++ + M +AD+ +W S+L +C ++ + LG+ A+ + L+ +N
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Query: 507 SAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCI 566
S +YV+LSN+YA+ G + V +VR LMKE+G+ K+ S IEI NKVH F GD H
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKS 522
Query: 567 DKIHLELKRASVQMKS 582
+I+ L++ S ++KS
Sbjct: 523 KEIYTMLRKISERIKS 538
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 178/393 (45%), Gaps = 55/393 (13%)
Query: 44 LFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES--- 100
L +Y +N A + GKI + LF Q D+ + A I NG ++
Sbjct: 58 LLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLL 117
Query: 101 -KNLFQSMPVKNIVSWNCMIAGCI--DNDRIDDAFDYFQAMPERNTATYNAMISGFLKHG 157
L S N +++ ++ C I F + AT ++ + K G
Sbjct: 118 YVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVAT--GLVDVYAKGG 175
Query: 158 RLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVK 217
+ A ++F++MP R+++S TAM+ + K+G V+ ARAL D M +++VSW VMI GY +
Sbjct: 176 DVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQ 235
Query: 218 NERFCEARELFYRM-----PDYDK---------------------------------NVF 239
+ +A LF ++ P D+ NV
Sbjct: 236 HGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK 295
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
V T +I + K G LE A L+F KD V++NAMIAGYA +G +++ALRLF+ M +
Sbjct: 296 VCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGIT 355
Query: 300 -MQPDDATLVSVFTACSALQLLNEG-RQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+QP D T + AC+ L+NEG R + G + + ++++ R G +
Sbjct: 356 GLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQL-- 413
Query: 358 SELAFRQIHSPNL----VSWNTIIAAFAQHGHY 386
+ A+ I + N+ V W++++ + HG +
Sbjct: 414 -KRAYETIKNMNMDADSVLWSSVLGSCKLHGDF 445
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 301/561 (53%), Gaps = 40/561 (7%)
Query: 42 IRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTK-DVITWNAIITGYWQNGFLQES 100
+++ S + +F + +++ R + LF++ K DV +WN++I ++G E+
Sbjct: 1 MKVRSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEA 60
Query: 101 KNLFQSM------PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA---------- 144
F SM P ++ S+ C I C FD F A
Sbjct: 61 LLAFSSMRKLSLYPTRS--SFPCAIKAC------SSLFDIFSGKQTHQQAFVFGYQSDIF 112
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARAL-------- 196
+A+I + G+LE+A ++F+++P+RN++S+T+M+ G+ G A +L
Sbjct: 113 VSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDE 172
Query: 197 --SDYMSFKNVVSWTVMITG--YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVG 252
D F + + +I+ V + E+ F +D+ V V ++ + K G
Sbjct: 173 NDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG 232
Query: 253 M--LENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDA-TLVS 309
+ AR +F++I KD VS+N++++ YAQ+G++ EA +F ++K + +A TL +
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292
Query: 310 VFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPN 369
V A S L G+ H VIR G E +V V ++I MY +CG + + AF ++ + N
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKN 352
Query: 370 LVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE 429
+ SW +IA + HGH KAL F M +G P+ ITF+S+L+AC HAG E F
Sbjct: 353 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 412
Query: 430 LMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNV 489
M +G+ P EHY C+VD+L RAG L+KA+ + Q M + D+ +W SLLAAC I+ NV
Sbjct: 413 AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNV 472
Query: 490 ELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEI 549
EL E++ ++ ELD N Y++LS++YA AG W+DV RVR++MK +G+ K +S +E+
Sbjct: 473 ELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLEL 532
Query: 550 GNKVHYFLGGDMSHPCIDKIH 570
+VH FL GD HP +KI+
Sbjct: 533 NGEVHVFLIGDEEHPQREKIY 553
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+IR+ V V + I + G++ AR+ FD+M K+V +W A+I GY +G ++
Sbjct: 313 VIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKA 372
Query: 101 KNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPER-----NTATYNAMIS 151
LF +M N +++ ++A C + + +F AM R Y M+
Sbjct: 373 LELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVD 432
Query: 152 GFLKHGRLEEATRLFEQM 169
+ G L++A L ++M
Sbjct: 433 LLGRAGFLQKAYDLIQRM 450
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 295 bits (755), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 184/593 (31%), Positives = 311/593 (52%), Gaps = 57/593 (9%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F+ +V + A IS+L KI A + DV N++I+ Y + G +++ +F
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHA--MVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFD---YFQAM------PERNTATYNAMISGFLK 155
+ MP ++IVSWN MI+G + + D F F+ M P+R +T +A+ G
Sbjct: 189 EEMPERDIVSWNSMISGYLA---LGDGFSSLMLFKEMLKCGFKPDR-FSTMSAL--GACS 242
Query: 156 H------GRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWT 209
H G+ + ++ +V+ T++LD + K GEV A + + M +N+V+W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 210 VMITGYVKNERFCEARELFYRM-------PD---------------------------YD 235
VMI Y +N R +A F +M PD +
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFL 362
Query: 236 KNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGM 295
++ + TA+I + + G L++A ++F+R+ K+ +S+N++IA Y QNG AL LF +
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Query: 296 IKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGI 355
+ PD T+ S+ A + L+EGR+ H ++++ + +N + N+++ MY+ CG +
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 356 LDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSAC 415
D+ F I ++VSWN+II A+A HG ++ FS+M + +P+ TF SLL+AC
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 416 GHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGV 475
+G V+E + FE M + YGI P EHY C++D++ R G A + + MPF +
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 476 WGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKE 535
WGSLL A + ++ + E AA+++ +++ N+ YV+L N+YA AG W DV R++LLM+
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 536 QGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVE 588
+G+++ + S +E K H F GD SH +KI+ L S + D +V
Sbjct: 663 KGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVH 715
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 172/362 (47%), Gaps = 14/362 (3%)
Query: 133 DYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDK 192
D ++ + N + GF +E+A +LF++M + + + M+ GF G +
Sbjct: 54 DRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIE 113
Query: 193 ARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP------DYDKNVFVVTAMIT 246
A M F V + T +K+ + E ++ + +V+V ++I+
Sbjct: 114 AVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLIS 173
Query: 247 GFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDAT 306
+ K+G +A +FE + +D VS+N+MI+GY G +L LF M+K +PD +
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 307 LVSVFTACSALQLLNEGRQSHVLVIRNGFE-ANVSVCNAVITMYSRCGGILDSELAFRQI 365
+S ACS + G++ H +R+ E +V V +++ MYS+ G + +E F +
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMG-LNGFDPDGITFLSLLSACGHAGKVNES 424
N+V+WN +I +A++G A + F +M NG PD IT ++LL A + E
Sbjct: 294 IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEG 349
Query: 425 MDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACV 484
+ ++ G +P T L+D+ GQL+ A I M E + W S++AA V
Sbjct: 350 RTIHGYAMR-RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYV 407
Query: 485 IN 486
N
Sbjct: 408 QN 409
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 1/280 (0%)
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
+T + GF ++E+A LF+ + D +N MI G+ G+ EA++ +S M+ +
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
+ D T V + + + L EG++ H +VI+ GF ++V VCN++I++Y + G D+E
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGK 420
F ++ ++VSWN++I+ + G +L+ F +M GF PD + +S L AC H
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 421 VNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
++ V+ T ++D+ S+ G++ A +I GM + + W ++
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMI 305
Query: 481 AACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAA 520
N V L +KM E + V ++ L A+A
Sbjct: 306 GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA 345
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 295 bits (755), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 169/559 (30%), Positives = 299/559 (53%), Gaps = 18/559 (3%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
++RL V + N+ I SR GK+ +R++F+ M +++ +WN+I++ Y + G++ ++
Sbjct: 115 VLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDA 174
Query: 101 KNLFQSMPV----KNIVSWNCMIAGCIDNDRIDDAFDYFQAMP----ERNTATYNAMISG 152
L M + +IV+WN +++G DA + M + +T++ ++++
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 153 FLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSW 208
+ G L+ + + R +V T ++D ++K G + AR + D M KN+V+W
Sbjct: 235 VAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAW 294
Query: 209 TVMITGYVKNERFCEARELFYRMPDYDKNVFVVT--AMITGFCKVGMLENARLLFERIQP 266
+++G +A L RM +T ++ +G+ +G E A + +++
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 267 K----DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNE 322
K + VS+ A+ +G ++NG AL++F M + + P+ AT+ ++ L LL+
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHS 414
Query: 323 GRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQ 382
G++ H +R + V A++ MY + G + + F I + +L SWN ++ +A
Sbjct: 415 GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAM 474
Query: 383 HGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSE 442
G E+ + FS M G +PD ITF S+LS C ++G V E F+LM YGIIP+ E
Sbjct: 475 FGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIE 534
Query: 443 HYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
H +C+VD+L R+G L++AW Q M + D +WG+ L++C I+ ++EL E+A K+++ L
Sbjct: 535 HCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVL 594
Query: 503 DPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMS 562
+P NSA Y+M+ NLY+ W DV R+R LM+ V Q +SWI+I VH F +
Sbjct: 595 EPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKT 654
Query: 563 HPCIDKIHLELKRASVQMK 581
HP I+ EL + +MK
Sbjct: 655 HPDEGDIYFELYKLVSEMK 673
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 162/310 (52%), Gaps = 8/310 (2%)
Query: 240 VVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMD 299
VV+A + + + L A LF+ + +D +++N ++ ++G E+A+ LF M
Sbjct: 25 VVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSG 84
Query: 300 MQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSE 359
+ D+T+V + CS + EGRQ H V+R G E+NVS+CN++I MYSR G + S
Sbjct: 85 AKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSR 144
Query: 360 LAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAG 419
F + NL SWN+I++++ + G+ + A+ +M + G PD +T+ SLLS G
Sbjct: 145 KVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG 204
Query: 420 KVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSL 479
+++ + + M ++ G+ PS+ + L+ ++ G L K + G +W +
Sbjct: 205 LSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHL-KLGKAIHGYILRNQ--LWYDV 260
Query: 480 -LAACVINLNVELGELAAKKM--RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQ 536
+ +I++ ++ G L +M +D +N + L + + A + +D + + M+++
Sbjct: 261 YVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKE 320
Query: 537 GVTKQCAYSW 546
G+ K A +W
Sbjct: 321 GI-KPDAITW 329
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 101/219 (46%), Gaps = 6/219 (2%)
Query: 323 GRQSHVLVIRNGFE-ANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G H +I+ G + ++ V +A + Y RC + + F ++ + ++WN I+
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSS 441
+ G++EKA+ F +M +G T + LL C + E + ++++ G+ +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRL-GLESNV 124
Query: 442 EHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVE--LGELAAKKM 499
L+ + SR G+LE + ++ M + + W S+L++ V+ +G L ++
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 500 RELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
L P +LS YA+ G+ +D V M+ G+
Sbjct: 184 CGLKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGL 221
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 270/490 (55%), Gaps = 15/490 (3%)
Query: 85 NAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTA 144
N +I Y + G ++ +F M ++N+ SWN M++G + + + A F +MPER+
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 145 TYNAMISGFLKHGRLEEATRLFEQMPRR----NVISYTAMLDGFMKKGEVDKARA----- 195
++N M+ G+ + G L EA +++ R N S+ +L +K ++ R
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 196 -LSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGML 254
++ ++S NVV +I Y K + A+ F M K++ + T +I+G+ K+G +
Sbjct: 206 LVAGFLS--NVVLSCSIIDAYAKCGQMESAKRCFDEMTV--KDIHIWTTLISGYAKLGDM 261
Query: 255 ENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
E A LF + K+ VS+ A+IAGY + G AL LF MI + ++P+ T S A
Sbjct: 262 EAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCAS 321
Query: 315 SALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSP-NLVSW 373
+++ L G++ H +IR N V +++I MYS+ G + SE FR + V W
Sbjct: 322 ASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFW 381
Query: 374 NTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVK 433
NT+I+A AQHG KAL M P+ T + +L+AC H+G V E + FE M
Sbjct: 382 NTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTV 441
Query: 434 VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGE 493
+GI+P EHY CL+D+L RAG ++ + + MPFE D +W ++L C I+ N ELG+
Sbjct: 442 QHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGK 501
Query: 494 LAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKV 553
AA ++ +LDP++SA Y++LS++YA G W V ++R +MK++ V K+ A SWIEI KV
Sbjct: 502 KAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKV 561
Query: 554 HYFLGGDMSH 563
F D SH
Sbjct: 562 EAFTVSDGSH 571
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 189/427 (44%), Gaps = 89/427 (20%)
Query: 45 FSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLF 104
F ++N I + GK A ++FDQM +++ +WN +++GY ++G L ++ +F
Sbjct: 77 FKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVF 136
Query: 105 QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYN----------------- 147
SMP +++VSWN M+ G + + +A +++ R+ +N
Sbjct: 137 DSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF-RRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 148 ---------AMISGFL--------------KHGRLEEATRLFEQMPRRNVISYTAMLDGF 184
+++GFL K G++E A R F++M +++ +T ++ G+
Sbjct: 196 QLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGY 255
Query: 185 MKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM------------- 231
K G+++ A L M KN VSWT +I GYV+ A +LF +M
Sbjct: 256 AKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Query: 232 ------------------------PDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPK 267
+ N V++++I + K G LE + +F K
Sbjct: 316 SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK 375
Query: 268 -DCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG-RQ 325
DCV +N MI+ AQ+G+ +ALR+ MIK +QP+ TLV + ACS L+ EG R
Sbjct: 376 HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRW 435
Query: 326 SHVLVIRNGFEANVSVCNAVITMYSRCGGILD-----SELAFRQIHSPNLVSWNTIIAAF 380
+ +++G + +I + R G + E+ F P+ WN I+
Sbjct: 436 FESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPF----EPDKHIWNAILGVC 491
Query: 381 AQHGHYE 387
HG+ E
Sbjct: 492 RIHGNEE 498
>sp|P0C7R0|PPR69_ARATH Pentatricopeptide repeat-containing protein At1g32415,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E56 PE=2
SV=1
Length = 761
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 295/560 (52%), Gaps = 53/560 (9%)
Query: 54 NAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIV 113
N ++ L R G + A+Q+FD M ++DV++WNA+I GY +N ++E+K LF M KN+V
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV 232
Query: 114 SWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPR-- 171
+W M+ G + +A+ F MPERN ++ AMISGF + EA LF +M +
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDV 292
Query: 172 -------RNVISYTAMLDG----FMKKGEVDKARALS--------DYMSFKNVV------ 206
+IS G F + GE A+ +S D K++V
Sbjct: 293 DAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASS 352
Query: 207 -----------------SWTVMITGYVKNERFCEARELFYRMPD-YDKNVFVVTAMITGF 248
S ++I Y+KN A LF R+ +DK + T+MI G+
Sbjct: 353 GLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSW--TSMIDGY 410
Query: 249 CKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
+ G + A LF+++ KD V++ MI+G QN + EA L S M++ ++P ++T
Sbjct: 411 LEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYS 470
Query: 309 SVFTACSALQLLNEGRQSHVLVIRNG--FEANVSVCNAVITMYSRCGGILDSELAFRQIH 366
+ ++ A L++G+ H ++ + ++ ++ + N++++MY++CG I D+ F ++
Sbjct: 471 VLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMV 530
Query: 367 SPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMD 426
+ VSWN++I + HG +KAL F +M +G P+ +TFL +LSAC H+G + ++
Sbjct: 531 QKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLE 590
Query: 427 LFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVIN 486
LF+ M + Y I P +HY ++D+L RAG+L++A + +PF D V+G+LL C +N
Sbjct: 591 LFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLN 650
Query: 487 LNVE----LGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQC 542
+ + E AA ++ ELDP N+ +V L N+YA G +R M +GV K
Sbjct: 651 WRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTP 710
Query: 543 AYSWIEIGNKVHYFLGGDMS 562
SW+ + + + FL GD S
Sbjct: 711 GCSWVVVNGRANVFLSGDKS 730
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 216/444 (48%), Gaps = 76/444 (17%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
+S ++ G + AR LF+ M ++++T NA++TGY + + E+ LF+ MP KN+VSW
Sbjct: 84 LSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWT 142
Query: 117 CMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVIS 176
M+ D+ R +DA + F MPERN ++N +++G +++G +E+A ++F+ MP R+V+S
Sbjct: 143 VMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVS 202
Query: 177 YTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPDYDK 236
+ AM+ G+++ +++A+ L MS KNVV+WT M+ GY + EA LF MP ++
Sbjct: 203 WNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP--ER 260
Query: 237 NVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI 296
N+ TAMI+GF A N + EAL LF M
Sbjct: 261 NIVSWTAMISGF-------------------------------AWNELYREALMLFLEMK 289
Query: 297 K-MD-MQPDDATLVSVFTACSAL--QLLNEGRQSHVLVIRNGFEA--------------- 337
K +D + P+ TL+S+ AC L + G Q H VI NG+E
Sbjct: 290 KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Query: 338 -----------------NVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAA 379
++ CN +I Y + G + +E F ++ S + VSW ++I
Sbjct: 350 ASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDG 409
Query: 380 FAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIP 439
+ + G +A F ++ D DG+T+ ++S E+ L MV+ G+ P
Sbjct: 410 YLEAGDVSRAFGLFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC-GLKP 464
Query: 440 SSEHYTCLVDILSRAGQLEKAWQI 463
+ Y+ L+ L++ I
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHI 488
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 219/467 (46%), Gaps = 51/467 (10%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
L + + + NA ++ + +++ A LF +M K+V++W ++T +G +++
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDA 157
Query: 101 KNLFQSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLE 160
LF MP +N+VSWN ++ G I N ++ A F AMP R+ ++NAMI G++++ +E
Sbjct: 158 VELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGME 217
Query: 161 EATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNER 220
EA LF M +NV+++T+M+ G+ + G+V +A L M +N+VSWT MI+G+ NE
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNEL 277
Query: 221 FCEARELFYRMPDYDKNVFVV-----TAMITGFCKVGMLENARLLFERIQPKDCVSFNAM 275
+ EA LF M K+V V T + + G+ R L E++
Sbjct: 278 YREALMLFLEMK---KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLH---------- 324
Query: 276 IAGYAQNG--VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEG--RQSHVLVI 331
A NG + RL ++ M S SA LLNE QS ++I
Sbjct: 325 -AQVISNGWETVDHDGRLAKSLVHM--------YASSGLIASAQSLLNESFDLQSCNIII 375
Query: 332 ----RNG--------FEANVSVCNAV-----ITMYSRCGGILDSELAFRQIHSPNLVSWN 374
+NG FE S+ + V I Y G + + F+++H + V+W
Sbjct: 376 NRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWT 435
Query: 375 TIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKV 434
+I+ Q+ + +A S M G P T+ LLS+ G +++ + ++ K
Sbjct: 436 VMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKT 495
Query: 435 YGII-PSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLL 480
P LV + ++ G +E A++I M + DT W S++
Sbjct: 496 TACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMI 541
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 39 NCLIRLFSTQY---VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNG 95
+C+I + Y + + N+ +S ++ G I A ++F +M KD ++WN++I G +G
Sbjct: 489 HCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHG 548
Query: 96 FLQESKNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----Y 146
++ NLF+ M N V++ +++ C + I + F+AM E + Y
Sbjct: 549 LADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHY 608
Query: 147 NAMISGFLKHGRLEEATRLFEQMP 170
+MI + G+L+EA +P
Sbjct: 609 ISMIDLLGRAGKLKEAEEFISALP 632
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 299/552 (54%), Gaps = 18/552 (3%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
VF N + A ++ KI ARQLFD++ D +++N +I+GY + LF+ M
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 110 KNI----VSWNCMIAGCIDNDRIDDAFDYFQAMP--ERNTATYNAMISGFLKHGRLEEAT 163
+ + +IA C D + F + ++ NA ++ + K G L EA
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 164 RLFEQMPR-RNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVVSWTVMITGYVKN 218
+F M R+ +S+ +M+ + + E KA AL M FK ++ + ++
Sbjct: 194 SVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL 253
Query: 219 ERFCEARELFYRM--PDYDKNVFVVTAMITGFCKVGMLE---NARLLFERIQPKDCVSFN 273
+ R+ ++ + +N V + +I + K G + ++ +F+ I D V +N
Sbjct: 254 DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWN 313
Query: 274 AMIAGYAQNG-VAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIR 332
MI+GY+ N ++EEA++ F M ++ +PDD + V V +ACS L ++ +Q H L I+
Sbjct: 314 TMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIK 373
Query: 333 NGFEAN-VSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALI 391
+ +N +SV NA+I++Y + G + D+ F ++ N VS+N +I +AQHGH +AL+
Sbjct: 374 SHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALL 433
Query: 392 FFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDIL 451
+ +M +G P+ ITF+++LSAC H GKV+E + F M + + I P +EHY+C++D+L
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLL 493
Query: 452 SRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYV 511
RAG+LE+A + MP++ + W +LL AC + N+ L E AA ++ + P + YV
Sbjct: 494 GRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYV 553
Query: 512 MLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHL 571
ML+N+YA A W ++ VR M+ + + K+ SWIE+ K H F+ D SHP I +++
Sbjct: 554 MLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNE 613
Query: 572 ELKRASVQMKSV 583
L+ +MK V
Sbjct: 614 YLEEMMKKMKKV 625
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 174/377 (46%), Gaps = 44/377 (11%)
Query: 134 YFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA 193
Y +++ +T N ++ + K GRL A F NV SY ++ + K ++ A
Sbjct: 34 YVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIA 93
Query: 194 RALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMPD-------------------- 233
R L D + + VS+ +I+GY A LF RM
Sbjct: 94 RQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR 153
Query: 234 ---------------YDKNVFVVTAMITGFCKVGMLENARLLFERI-QPKDCVSFNAMIA 277
+D V A +T + K G+L A +F + + +D VS+N+MI
Sbjct: 154 VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIV 213
Query: 278 GYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEA 337
Y Q+ +AL L+ MI + D TL SV A ++L L GRQ H +I+ GF
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ 273
Query: 338 NVSVCNAVITMYSRCG---GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHY-EKALIFF 393
N V + +I YS+CG G+ DSE F++I SP+LV WNT+I+ ++ + E+A+ F
Sbjct: 274 NSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSF 333
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYT--CLVDIL 451
QM G PD +F+ + SAC + ++ + L +K + IPS+ L+ +
Sbjct: 334 RQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH--IPSNRISVNNALISLY 391
Query: 452 SRAGQLEKAWQITQGMP 468
++G L+ A + MP
Sbjct: 392 YKSGNLQDARWVFDRMP 408
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 10/291 (3%)
Query: 215 YVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNA 274
Y K R AR FY + NVF ++ + K + AR LF+ I D VS+N
Sbjct: 53 YSKCGRLSYARAAFYSTEE--PNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNT 110
Query: 275 MIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNG 334
+I+GYA A+ LF M K+ + D TL + AC ++ +Q H + G
Sbjct: 111 LISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGG 168
Query: 335 FEANVSVCNAVITMYSRCGGILDSELAFRQIHS-PNLVSWNTIIAAFAQHGHYEKALIFF 393
F++ SV NA +T YS+ G + ++ F + + VSWN++I A+ QH KAL +
Sbjct: 169 FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALY 228
Query: 394 SQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSR 453
+M GF D T S+L+A + ++K G +S + L+D S+
Sbjct: 229 KEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA-GFHQNSHVGSGLIDFYSK 287
Query: 454 AGQLEKAWQITQGMP--FEADTGVWGSLLAACVINLNVELGELAAKKMREL 502
G + + + D VW ++++ ++N EL E A K R++
Sbjct: 288 CGGCDGMYDSEKVFQEILSPDLVVWNTMISG--YSMNEELSEEAVKSFRQM 336
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/523 (31%), Positives = 288/523 (55%), Gaps = 15/523 (2%)
Query: 73 FDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSM--PVKNIVSWNCMIAGCIDNDRIDD 130
F T V+ I+ NG LQE+ L +M P ++ ++ C+D + D
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEAL-LEMAMLGPEMGFHGYDALLNACLDKRALRD 70
Query: 131 AFDYFQAMPERN--TATY--NAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMK 186
M + ATY ++ + K LE+A ++ ++MP +NV+S+TAM+ + +
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 187 KGEVDKARALSDYM----SFKNVVSWTVMITGYVKNERFCEARELFYRMP--DYDKNVFV 240
G +A + M N ++ ++T ++ +++ + +YD ++FV
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 241 VTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDM 300
++++ + K G ++ AR +FE + +D VS A+IAGYAQ G+ EEAL +F + M
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 301 QPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSEL 360
P+ T S+ TA S L LL+ G+Q+H V+R + N++I MYS+CG + +
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 361 AFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQM-GLNGFDPDGITFLSLLSACGHAG 419
F + +SWN ++ +++HG + L F M PD +T L++LS C H
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370
Query: 420 KVNESMDLFELMVK-VYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGS 478
+ +++F+ MV YG P +EHY C+VD+L RAG++++A++ + MP + GV GS
Sbjct: 371 MEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGS 430
Query: 479 LLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGV 538
LL AC ++L+V++GE +++ E++P+N+ YV+LSNLYA+AG W DV VR +M ++ V
Sbjct: 431 LLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAV 490
Query: 539 TKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
TK+ SWI+ +HYF D +HP +++ ++K S++MK
Sbjct: 491 TKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMK 533
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 197/437 (45%), Gaps = 64/437 (14%)
Query: 44 LFSTQYVFVNNAKISALSRAGK---ISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+ T+Y+ + L GK + AR++ D+M K+V++W A+I+ Y Q G E+
Sbjct: 78 MIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEA 137
Query: 101 KNLFQSM----PVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTATY----NAMISG 152
+F M N ++ ++ CI + + + N ++ ++++
Sbjct: 138 LTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDM 197
Query: 153 FLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKA-----RALSDYMSFKNVVS 207
+ K G+++EA +FE +P R+V+S TA++ G+ + G ++A R S+ MS N V+
Sbjct: 198 YAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS-PNYVT 256
Query: 208 WTVMIT-----GYVKNERFCEARELFYRMPDYDKNVFVVTAMITGFCKVGMLENARLLFE 262
+ ++T + + + L +P Y + ++I + K G L AR LF+
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFY---AVLQNSLIDMYSKCGNLSYARRLFD 313
Query: 263 RIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMI-KMDMQPDDATLVSVFTACSALQLLN 321
+ + +S+NAM+ GY+++G+ E L LF M + ++PD TL++V + CS ++ +
Sbjct: 314 NMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMED 373
Query: 322 EGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFA 381
G I D +A P + I+
Sbjct: 374 TGLN-----------------------------IFDGMVAGEYGTKPGTEHYGCIVDMLG 404
Query: 382 QHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFE-LMVKVYGIIP- 439
+ G ++A F +M P SLL AC +V+ S+D+ E + ++ I P
Sbjct: 405 RAGRIDEAFEFIKRMPSK---PTAGVLGSLLGAC----RVHLSVDIGESVGRRLIEIEPE 457
Query: 440 SSEHYTCLVDILSRAGQ 456
++ +Y L ++ + AG+
Sbjct: 458 NAGNYVILSNLYASAGR 474
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 268/476 (56%), Gaps = 6/476 (1%)
Query: 118 MIAGCIDNDRIDDAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLFEQMPRRNVISY 177
+I C D +D A+D F + N Y AMI GF+ GR + L+ +M +V+
Sbjct: 67 LIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPD 126
Query: 178 TAMLDGFMKKGEVDKARALSDY---MSFKNVVSWTV-MITGYVKNERFCEARELFYRMPD 233
++ +K ++ R + + F + S + M+ Y K+ A+++F MPD
Sbjct: 127 NYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPD 186
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
D T MI + + G ++ A LF+ ++ KD V + AMI G +N +AL LF
Sbjct: 187 RDH--VAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFR 244
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
M ++ ++ T V V +ACS L L GR H V E + V NA+I MYSRCG
Sbjct: 245 EMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCG 304
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
I ++ FR + +++S+NT+I+ A HG +A+ F M GF P+ +T ++LL+
Sbjct: 305 DINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLN 364
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADT 473
AC H G ++ +++F M +V+ + P EHY C+VD+L R G+LE+A++ + +P E D
Sbjct: 365 ACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDH 424
Query: 474 GVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLM 533
+ G+LL+AC I+ N+ELGE AK++ E + +S YV+LSNLYA++G W++ T +R M
Sbjct: 425 IMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
Query: 534 KEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMKSVDDFVEI 589
++ G+ K+ S IE+ N++H FL GD++HP + I+ L+ + ++ ++ ++I
Sbjct: 485 RDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKENQIDI 540
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 131/270 (48%), Gaps = 22/270 (8%)
Query: 62 RAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMIAG 121
++G++ A+++FD+M +D + +I Y + GF++E+ LFQ + +K+ V W MI G
Sbjct: 170 KSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDG 229
Query: 122 CIDNDRIDDAFDYFQAMPERNTA----TYNAMIS-----GFLKHGRLEEATRLFEQMPRR 172
+ N ++ A + F+ M N + T ++S G L+ GR + ++M
Sbjct: 230 LVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELS 289
Query: 173 NVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRMP 232
N + A+++ + + G++++AR + M K+V+S+ MI+G + EA F M
Sbjct: 290 NFVG-NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMV 348
Query: 233 D--YDKNVFVVTAMITGFCKVGMLENARLLFE------RIQPKDCVSFNAMIAGYAQNGV 284
+ + N + A++ G+L+ +F ++P+ + ++ + G
Sbjct: 349 NRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQ-IEHYGCIVDLLGRVGR 407
Query: 285 AEEALRLFSGMIKMDMQPDDATLVSVFTAC 314
EEA R + ++PD L ++ +AC
Sbjct: 408 LEEAYRFIE---NIPIEPDHIMLGTLLSAC 434
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 111/225 (49%), Gaps = 9/225 (4%)
Query: 234 YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFS 293
+D++ FVV +I + ++ A +F + + + AMI G+ +G + + + L+
Sbjct: 57 HDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYH 116
Query: 294 GMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCG 353
MI + PD+ + SV AC L R+ H V++ GF ++ SV ++ +Y + G
Sbjct: 117 RMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSG 172
Query: 354 GILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLS 413
+++++ F ++ + V+ +I +++ G ++AL F + + D + + +++
Sbjct: 173 ELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIK----DTVCWTAMID 228
Query: 414 ACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLE 458
++N++++LF M ++ + + C++ S G LE
Sbjct: 229 GLVRNKEMNKALELFREM-QMENVSANEFTAVCVLSACSDLGALE 272
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 51 FVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVK 110
FV NA I+ SR G I+ AR++F M KDVI++N +I+G +G E+ N F+ M +
Sbjct: 291 FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNR 350
Query: 111 ----NIVSWNCMIAGCIDNDRIDDAFDYFQAMP-----ERNTATYNAMISGFLKHGRLEE 161
N V+ ++ C +D + F +M E Y ++ + GRLEE
Sbjct: 351 GFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEE 410
Query: 162 ATRLFEQMP 170
A R E +P
Sbjct: 411 AYRFIENIP 419
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 31/275 (11%)
Query: 57 ISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWN 116
I+ S G I A +LF + KD + W A+I G +N + ++ LF+ M ++N VS N
Sbjct: 196 INCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN-VSAN 254
Query: 117 -----CMIAGCIDNDRID-----DAFDYFQAMPERNTATYNAMISGFLKHGRLEEATRLF 166
C+++ C D ++ +F Q M E + NA+I+ + + G + EA R+F
Sbjct: 255 EFTAVCVLSACSDLGALELGRWVHSFVENQRM-ELSNFVGNALINMYSRCGDINEARRVF 313
Query: 167 EQMPRRNVISYTAMLDGFMKKG----EVDKARALSDYMSFKNVVSWTVMITGYVKNERFC 222
M ++VISY M+ G G +++ R + + N V+ ++
Sbjct: 314 RVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLD 373
Query: 223 EARELFYRMPDYDKNVFVVTAMITGF-C------KVGMLENARLLFER--IQPKDCVSFN 273
E+F M K VF V I + C +VG LE A E I+P D +
Sbjct: 374 IGLEVFNSM----KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEP-DHIMLG 428
Query: 274 AMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLV 308
+++ +G E ++ + + + PD T V
Sbjct: 429 TLLSACKIHGNMELGEKIAKRLFESE-NPDSGTYV 462
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 83/207 (40%), Gaps = 30/207 (14%)
Query: 306 TLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQI 365
TL+SV +C + + H +IR + + V +I + S + + F +
Sbjct: 31 TLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 366 HSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACG-------HA 418
+PN+ + +I F G + + +M N PD S+L AC HA
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 419 GKVN----ESMDLFELMVKVYGI-------------IPSSEHY--TCLVDILSRAGQLEK 459
+ S + M+++YG +P +H T +++ S G +++
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 460 AWQITQGMPFEADTGVWGSLLAACVIN 486
A ++ Q + + DT W +++ V N
Sbjct: 208 ALELFQDVKIK-DTVCWTAMIDGLVRN 233
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 289 bits (739), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 264/474 (55%), Gaps = 38/474 (8%)
Query: 146 YNAMISGFLKHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNV 205
+N ++ + K G L +A ++F++MP R++ S+ M++G+ + G +++AR L D M+ K+
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS 182
Query: 206 VSWTVMITGYVKNERFCEARELF---YRMPDYDKNVFVVT-------------------- 242
SWT M+TGYVK ++ EA L+ R+P+ N+F V+
Sbjct: 183 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 243 ---------------AMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEE 287
+++ + K G ++ AR +F++I KD VS+ +MI Y ++ E
Sbjct: 243 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWRE 302
Query: 288 ALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVIT 347
LFS ++ +P++ T V AC+ L G+Q H + R GF+ ++++
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVD 362
Query: 348 MYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGIT 407
MY++CG I ++ P+LVSW ++I AQ+G ++AL +F + +G PD +T
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 408 FLSLLSACGHAGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
F+++LSAC HAG V + ++ F + + + + +S+HYTCLVD+L+R+G+ E+ + M
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 468 PFEADTGVWGSLLAACVINLNVELGELAAKKMRELDPQNSAVYVMLSNLYAAAGMWRDVT 527
P + +W S+L C N++L E AA+++ +++P+N YV ++N+YAAAG W +
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEG 542
Query: 528 RVRLLMKEQGVTKQCAYSWIEIGNKVHYFLGGDMSHPCIDKIHLELKRASVQMK 581
++R M+E GVTK+ SW EI K H F+ D SHP ++I L+ +MK
Sbjct: 543 KMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK 596
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 205/470 (43%), Gaps = 93/470 (19%)
Query: 50 VFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQESKNLFQSMPV 109
+ + N + ++ G + AR++FD+M +D+ +WN ++ GY + G L+E++ LF M
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 110 KNIVSWNCMIAGCIDNDRIDDA---FDYFQAMPERNTATYNAMIS------------GFL 154
K+ SW M+ G + D+ ++A + Q +P + I+ G
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 155 KHGRLEEATRLFEQMPRRNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITG 214
HG + A ++ + +++++D + K G +D+AR + D + K+VVSWT MI
Sbjct: 240 IHGHIVRAGLDSDE------VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDR 293
Query: 215 YVKNERFCEARELFYRM------PD-------------------------------YDKN 237
Y K+ R+ E LF + P+ +D
Sbjct: 294 YFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353
Query: 238 VFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIK 297
F ++++ + K G +E+A+ + + D VS+ ++I G AQNG +EAL+ F ++K
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 413
Query: 298 MDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILD 357
+PD T V+V +AC +H ++ G E S+
Sbjct: 414 SGTKPDHVTFVNVLSAC-----------THAGLVEKGLEFFYSITE-------------- 448
Query: 358 SELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGH 417
R H+ + + ++ A+ G +E+ S+M + P + S+L C
Sbjct: 449 ---KHRLSHTSD--HYTCLVDLLARSGRFEQLKSVISEMPMK---PSKFLWASVLGGCST 500
Query: 418 AGKVNESMDLFELMVKVYGIIPSSEHYTCLVDILSRAGQLEKAWQITQGM 467
G ++ + + + + K+ P + Y + +I + AG+ E+ ++ + M
Sbjct: 501 YGNIDLAEEAAQELFKIEPENPVT--YVTMANIYAAAGKWEEEGKMRKRM 548
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 41 LIRLFSTQYVFVNNAKISALSRAGKISAARQLFDQMTTKDVITWNAIITGYWQNGFLQES 100
+ R+ Y F +++ + ++ G I +A+ + D D+++W ++I G QNG E+
Sbjct: 345 MTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEA 404
Query: 101 KNLF----QSMPVKNIVSWNCMIAGCIDNDRIDDAFDYFQAMPERNTAT-----YNAMIS 151
F +S + V++ +++ C ++ ++F ++ E++ + Y ++
Sbjct: 405 LKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVD 464
Query: 152 GFLKHGRLEEATRLFEQMP-RRNVISYTAMLDGFMKKGEVDKARALSDYMSFK----NVV 206
+ GR E+ + +MP + + + ++L G G +D A + + FK N V
Sbjct: 465 LLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL-FKIEPENPV 523
Query: 207 SWTVMITGYVKNERFCEARELFYRMPD 233
++ M Y ++ E ++ RM +
Sbjct: 524 TYVTMANIYAAAGKWEEEGKMRKRMQE 550
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 289 bits (739), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 156/435 (35%), Positives = 243/435 (55%), Gaps = 14/435 (3%)
Query: 147 NAMISGFLKHGRLEEATRLFEQMPRRNVIS--YTAMLDGFMKKGEVDKARALSDYMSFKN 204
A+IS + K G + +A ++FE+ P+ + +S Y A++ G+ +V A + M
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 205 VVSWTVMITGYVKNERFCEARELFYR---------MPDYDKNVFVVTAMITGFCKVGMLE 255
V +V + G V C E + D V V+ + IT + K G +E
Sbjct: 152 VSVDSVTMLGLVP---LCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVE 208
Query: 256 NARLLFERIQPKDCVSFNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACS 315
R LF+ + K +++NA+I+GY+QNG+A + L L+ M + PD TLVSV ++C+
Sbjct: 209 AGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCA 268
Query: 316 ALQLLNEGRQSHVLVIRNGFEANVSVCNAVITMYSRCGGILDSELAFRQIHSPNLVSWNT 375
L G + LV NGF NV V NA I+MY+RCG + + F + +LVSW
Sbjct: 269 HLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTA 328
Query: 376 IIAAFAQHGHYEKALIFFSQMGLNGFDPDGITFLSLLSACGHAGKVNESMDLFELMVKVY 435
+I + HG E L+ F M G PDG F+ +LSAC H+G ++ ++LF M + Y
Sbjct: 329 MIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREY 388
Query: 436 GIIPSSEHYTCLVDILSRAGQLEKAWQITQGMPFEADTGVWGSLLAACVINLNVELGELA 495
+ P EHY+CLVD+L RAG+L++A + + MP E D VWG+LL AC I+ NV++ ELA
Sbjct: 389 KLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELA 448
Query: 496 AKKMRELDPQNSAVYVMLSNLYAAAGMWRDVTRVRLLMKEQGVTKQCAYSWIEIGNKVHY 555
K+ E +P N YV++SN+Y+ + + R+R++M+E+ K+ YS++E +VH
Sbjct: 449 FAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHL 508
Query: 556 FLGGDMSHPCIDKIH 570
FL GD SH +++H
Sbjct: 509 FLAGDRSHEQTEEVH 523
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 213/480 (44%), Gaps = 69/480 (14%)
Query: 16 LFPPILRILSTPD---------SCGNFTPHSSNCLIRLFSTQ-----YVFVNNAKISALS 61
L+ +LR S+PD SC + + S + T+ FV A IS
Sbjct: 40 LYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYC 99
Query: 62 RAGKISAARQLFDQ--MTTKDVITWNAIITGYWQNGFLQESKNLFQSMPVKNIVSWNCMI 119
+ G ++ AR++F++ +++ + +NA+I+GY N + ++ +F+ M + + +
Sbjct: 100 KCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTM 159
Query: 120 AGCIDNDRIDDAFDYFQAMP--------ERNTATYNAMISGFLKHGRLEEATRLFEQMPR 171
G + + + +++ + A N+ I+ ++K G +E RLF++MP
Sbjct: 160 LGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPV 219
Query: 172 RNVISYTAMLDGFMKKGEVDKARALSDYMSFKNVVSWTVMITGYVKNERFCEARELFYRM 231
+ +I++ A++ G+ + G L + M V + + + A+++ + +
Sbjct: 220 KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEV 279
Query: 232 PD------YDKNVFVVTAMITGFCKVGMLENARLLFERIQPKDCVSFNAMIAGYAQNGVA 285
+ NVFV A I+ + + G L AR +F+ + K VS+ AMI Y +G+
Sbjct: 280 GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMG 339
Query: 286 EEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVIRNGFEANVSVCNAV 345
E L LF MIK ++PD A V V +ACS L ++G + F A
Sbjct: 340 EIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL--------FRA-------- 383
Query: 346 ITMYSRCGGILDSELAFRQIHSPNLVSWNTIIAAFAQHGHYEKALIFFSQMGLNGFDPDG 405
+ E P ++ ++ + G ++A+ F M + +PDG
Sbjct: 384 ----------MKREYKLE----PGPEHYSCLVDLLGRAGRLDEAMEFIESMPV---EPDG 426
Query: 406 ITFLSLLSACGHAGKVNESMDLFEL-MVKVYGIIPSS-EHYTCLVDILSRAGQLEKAWQI 463
+ +LL AC K+++++D+ EL KV P++ +Y + +I S + E W+I
Sbjct: 427 AVWGALLGAC----KIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRI 482
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 272 FNAMIAGYAQNGVAEEALRLFSGMIKMDMQPDDATLVSVFTACSALQLLNEGRQSHVLVI 331
+N + A + E++ L+ M++ PD + + +C++L L G+Q H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 332 RNGFEANVSVCNAVITMYSRCGGILDSELAFRQ-IHSPNL-VSWNTIIAAFAQHGHYEKA 389
+ G E V A+I+MY +CG + D+ F + S L V +N +I+ + + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 390 LIFFSQMGLNGFDPDGITFLSLLSAC 415
F +M G D +T L L+ C
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLC 166
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,444,822
Number of Sequences: 539616
Number of extensions: 8381245
Number of successful extensions: 33472
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 22400
Number of HSP's gapped (non-prelim): 2456
length of query: 597
length of database: 191,569,459
effective HSP length: 123
effective length of query: 474
effective length of database: 125,196,691
effective search space: 59343231534
effective search space used: 59343231534
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)