Your job contains 1 sequence.
>007576
MTATSTTVTPNPKLSSAYSYSHYFQNHSSPKWTLEMNACKWHHCRRGQMIVTKASSSGSG
NKEKAGKRSTNTKKSNTNTNPDALTQQQQQQQQQPVSISLDDVNPVGLGRKSRQIFDEVW
RKFSGLGQISRTTRADDKDSLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRK
LMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTI
TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY
FQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVL
SVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPF
LVHTMTIRFEPRRQRPVEGPSGAKQDLRSFKLILEYIKALPTGQETDFVLVSCTGLGVEP
SRREQVLKAKRDGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRITQGISCADVA
DICVKALHDSTARNKSFDVCYEYVSEQGKELYELVAHLPDKANNYLTPALSVLEKNT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007576
(597 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2015651 - symbol:HCF173 "high chlorophyll fluo... 2135 4.2e-221 1
UNIPROTKB|Q71X34 - symbol:LMOf2365_2365 "Putative unchara... 130 7.3e-13 2
TAIR|locus:2185228 - symbol:AT5G02240 species:3702 "Arabi... 131 1.4e-10 2
TAIR|locus:2040716 - symbol:AT2G37660 species:3702 "Arabi... 127 1.7e-10 2
TAIR|locus:2030270 - symbol:AT1G72640 species:3702 "Arabi... 115 1.4e-08 2
TAIR|locus:2040854 - symbol:AT2G34460 species:3702 "Arabi... 101 6.7e-08 2
TAIR|locus:2119161 - symbol:FLDH "farnesol dehydrogenase"... 123 0.00014 1
TAIR|locus:2122083 - symbol:HCF244 "high chlorophyll fluo... 122 0.00023 1
TAIR|locus:2180019 - symbol:PCB2 "PALE-GREEN AND CHLOROPH... 117 0.00090 1
>TAIR|locus:2015651 [details] [associations]
symbol:HCF173 "high chlorophyll fluorescence phenotype
173" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0006413
"translational initiation" evidence=IMP] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006413 GO:GO:0009941 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR013857 Pfam:PF08547 eggNOG:COG0702
EMBL:AY062632 EMBL:AY128723 IPI:IPI00529705 RefSeq:NP_173116.1
UniGene:At.27283 UniGene:At.49888 ProteinModelPortal:Q8W4D6
SMR:Q8W4D6 STRING:Q8W4D6 PaxDb:Q8W4D6 PRIDE:Q8W4D6
EnsemblPlants:AT1G16720.1 GeneID:838243 KEGG:ath:AT1G16720
TAIR:At1g16720 HOGENOM:HOG000238768 InParanoid:Q8W4D6 OMA:KANNYLT
PhylomeDB:Q8W4D6 ProtClustDB:CLSN2679821 ArrayExpress:Q8W4D6
Genevestigator:Q8W4D6 Uniprot:Q8W4D6
Length = 598
Score = 2135 (756.6 bits), Expect = 4.2e-221, P = 4.2e-221
Identities = 406/503 (80%), Positives = 449/503 (89%)
Query: 95 PVSISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIREGPMCEF 154
P ++ LDDVNPVGLGR+SRQIFDEVWRKFSGLGQ+SRTTR D++++LD+LLIREGPMCEF
Sbjct: 96 PPTLKLDDVNPVGLGRRSRQIFDEVWRKFSGLGQMSRTTRPDEQETLDSLLIREGPMCEF 155
Query: 155 AIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDV 214
A+PGAQN TVLVVGATSRIGRIV+RKLMLRGY+VKALVRK D+EV+ MLPRSV+IV+GDV
Sbjct: 156 AVPGAQNVTVLVVGATSRIGRIVVRKLMLRGYTVKALVRKQDEEVMSMLPRSVDIVVGDV 215
Query: 215 GDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQXXXXXX 274
G+P TLK+AVE+C+KIIYCATARSTIT DL RVD+ GVYN+TKAFQD+NN+LAQ
Sbjct: 216 GEPSTLKSAVESCSKIIYCATARSTITADLTRVDHLGVYNLTKAFQDYNNRLAQLRAGKS 275
Query: 275 XXXXXXXXXXXXXXXXNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTR 334
+GWE+RQGTYFQD A KYD GMDAKFE +ET A FSGYVFTR
Sbjct: 276 SKSKLLLAKFKSAESLDGWEIRQGTYFQDTTASKYDGGMDAKFEFTETERAEFSGYVFTR 335
Query: 335 GGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTK 394
GGYVELSKKLSLPLG TLDRYEGLVLSVGGNGRSYV+ILEAGPS+D SQSK YFAR STK
Sbjct: 336 GGYVELSKKLSLPLGTTLDRYEGLVLSVGGNGRSYVVILEAGPSSDMSQSKQYFARISTK 395
Query: 395 VGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQRPVEGPSGAKQDLRSFKLIL 454
GFCRVRVPFS+FRPV P+DPP+DPFLVHT+TIRFEP+RQRPV+G +GA+QDLRSF L+
Sbjct: 396 AGFCRVRVPFSAFRPVNPEDPPLDPFLVHTLTIRFEPKRQRPVDGLAGAQQDLRSFSLVF 455
Query: 455 EYIKALPTGQETDFVLVSCTGLGVEPSRREQVLKAKRDGEDSLRRSGLGYTIIRPGPLKE 514
EYIKALP GQETDF+LVSCTG GVE +RREQVLKAKR GEDSLRRSGLGYTIIRPGPLKE
Sbjct: 456 EYIKALPAGQETDFILVSCTGSGVEANRREQVLKAKRAGEDSLRRSGLGYTIIRPGPLKE 515
Query: 515 EPGGQRALIFDQGNRITQGISCADVADICVKALHDSTARNKSFDVCYEYVSEQGKELYEL 574
EPGGQRALIFDQGNRI+QGISCADVADICVKALHDSTARNKSFDVC+EYV+EQG ELYEL
Sbjct: 516 EPGGQRALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCHEYVAEQGIELYEL 575
Query: 575 VAHLPDKANNYLTPALSVLEKNT 597
VAHLPDKANNYLTPALSVLEKNT
Sbjct: 576 VAHLPDKANNYLTPALSVLEKNT 598
>UNIPROTKB|Q71X34 [details] [associations]
symbol:LMOf2365_2365 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017262 GenomeReviews:AE017262_GR eggNOG:COG0702 OMA:NFRAVEL
HOGENOM:HOG000262434 RefSeq:YP_014954.1 ProteinModelPortal:Q71X34
STRING:Q71X34 GeneID:2797166 KEGG:lmf:LMOf2365_2365 PATRIC:20326096
ProtClustDB:CLSK564896 Uniprot:Q71X34
Length = 209
Score = 130 (50.8 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 37/109 (33%), Positives = 60/109 (55%)
Query: 457 IKALPTGQETD---FVLVSCTGLGVEPSRREQV---LKAKRDGEDSLRRSGLGYTIIRPG 510
IKA+ T +E F++VS G + E + LKAK+ ++ L+RSGL YTI+RP
Sbjct: 91 IKAIETAKEKGVRRFIIVSSYGADNPENGPESLIHYLKAKQAADEELKRSGLDYTIVRPV 150
Query: 511 PLKEEPGGQRALIFDQGNRITQGISCADVADICVKALHDSTARNKSFDV 559
L ++P + I + + T I ADVAD +AL + ++ K++ +
Sbjct: 151 GLSDDPATGK--IAEVSEKPTTTIPRADVADFISEALSEKSSFYKTYTI 197
Score = 101 (40.6 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 27/90 (30%), Positives = 49/90 (54%)
Query: 164 VLVVGATSRIGRIVIRKL-MLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKA 222
VLV+GA +IGR+++ KL M +G+ V+A+VRKA+Q V ++ + ++ D+
Sbjct: 3 VLVIGANGKIGRLLVEKLAMEKGFFVRAMVRKAEQ-VSELEKLGAKPIIADLKKD--FHY 59
Query: 223 AVENCNKIIYCA-TARSTITGDLFRVDYQG 251
A + +I+ A + T + +D G
Sbjct: 60 AYDEIEAVIFTAGSGGHTPASETINIDQNG 89
>TAIR|locus:2185228 [details] [associations]
symbol:AT5G02240 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886
GO:GO:0009737 GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046
EMBL:AL162508 eggNOG:COG0702 UniGene:At.21103 HOGENOM:HOG000262433
ProtClustDB:CLSN2688756 EMBL:AY142045 EMBL:BT000751 EMBL:AK221714
EMBL:AF410336 IPI:IPI00530877 PIR:T48245 RefSeq:NP_568098.1
PDB:1XQ6 PDB:1YBM PDB:2Q46 PDB:2Q4B PDBsum:1XQ6 PDBsum:1YBM
PDBsum:2Q46 PDBsum:2Q4B ProteinModelPortal:Q94EG6 SMR:Q94EG6
PaxDb:Q94EG6 PRIDE:Q94EG6 ProMEX:Q94EG6 DNASU:830851
EnsemblPlants:AT5G02240.1 GeneID:830851 KEGG:ath:AT5G02240
TAIR:At5g02240 InParanoid:Q94EG6 OMA:KTGFRIA PhylomeDB:Q94EG6
EvolutionaryTrace:Q94EG6 Genevestigator:Q94EG6 GermOnline:AT5G02240
Uniprot:Q94EG6
Length = 253
Score = 131 (51.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 486 VLKAKRDGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRI----TQGISCADVAD 541
+L KR E L SG YTIIR G L ++ GG R L+ + + + T+ + ADVA+
Sbjct: 151 ILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAE 210
Query: 542 ICVKALHDSTARNKSFDV 559
+C++AL A+NK+FD+
Sbjct: 211 VCIQALLFEEAKNKAFDL 228
Score = 85 (35.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 163 TVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTL 220
TVLV GA+ R G+IV +KL + K LVR A + + + ++ +GD+ D ++
Sbjct: 6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK--EKIGGEADVFIGDITDADSI 63
Query: 221 KAAVENCNKIIYCATA 236
A + + ++ +A
Sbjct: 64 NPAFQGIDALVILTSA 79
>TAIR|locus:2040716 [details] [associations]
symbol:AT2G37660 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0042742
"defense response to bacterium" evidence=IEP;RCA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0000272 "polysaccharide catabolic process"
evidence=RCA] [GO:0005982 "starch metabolic process" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009409 "response
to cold" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] InterPro:IPR016040 EMBL:AC004684 GO:GO:0009570
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0042742 GO:GO:0005507
GO:GO:0009579 eggNOG:COG0702 UniGene:At.26205 UniGene:At.66411
HOGENOM:HOG000262433 EMBL:AY042827 EMBL:AY081456 EMBL:AY085201
IPI:IPI00539231 PIR:T02532 RefSeq:NP_565868.1
ProteinModelPortal:O80934 SMR:O80934 STRING:O80934
SWISS-2DPAGE:O80934 World-2DPAGE:0003:O80934 PaxDb:O80934
PRIDE:O80934 ProMEX:O80934 EnsemblPlants:AT2G37660.1 GeneID:818343
KEGG:ath:AT2G37660 TAIR:At2g37660 InParanoid:O80934 OMA:GTNPNHP
PhylomeDB:O80934 ProtClustDB:CLSN2688756 Genevestigator:O80934
GermOnline:AT2G37660 Uniprot:O80934
Length = 325
Score = 127 (49.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 486 VLKAKRDGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRI----TQGISCADVAD 541
+L KR E L SG+ YTIIR G L+++ GG R L+ + + + T+ I+ ADVA+
Sbjct: 223 ILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGGIRELLVGKDDELLETETRTIARADVAE 282
Query: 542 ICVKALHDSTARNKSFDV 559
+CV+AL A+ K+ D+
Sbjct: 283 VCVQALQLEEAKFKALDL 300
Score = 94 (38.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 163 TVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTL 220
TVLV GA R G+IV +KL R + + LVR + + + + E+ +GD+ D ++
Sbjct: 78 TVLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESK--EKINGEDEVFIGDIRDTASI 135
Query: 221 KAAVENCNKIIYCATA 236
AVE + ++ +A
Sbjct: 136 APAVEGIDALVILTSA 151
>TAIR|locus:2030270 [details] [associations]
symbol:AT1G72640 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] InterPro:IPR016040 EMBL:CP002684
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0009535 EMBL:BT011739
IPI:IPI00533777 RefSeq:NP_177408.3 UniGene:At.35075
ProteinModelPortal:Q6NMC1 SMR:Q6NMC1 PRIDE:Q6NMC1
EnsemblPlants:AT1G72640.1 GeneID:843596 KEGG:ath:AT1G72640
TAIR:At1g72640 HOGENOM:HOG000265886 InParanoid:Q6NMC1 OMA:AFGTYVE
PhylomeDB:Q6NMC1 ProtClustDB:CLSN2681414 Genevestigator:Q6NMC1
Uniprot:Q6NMC1
Length = 312
Score = 115 (45.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 33/107 (30%), Positives = 48/107 (44%)
Query: 477 GVEPSRREQVLKAKRDGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRITQGISC 536
G++ + K E++ S + YTIIR G L+ PGG + F G IS
Sbjct: 205 GIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGKLENSPGGSQGFNFSAGAAAKGSISK 264
Query: 537 ADVADICVKALHDSTARNKSFDVCY--EYVSEQGKELYELVAHLPDK 581
D A ICV+AL F+V E VS+ +L +++ DK
Sbjct: 265 EDAARICVEALSVIPPTGLIFEVTNGEEVVSDWEGQLMKVMQRQSDK 311
Score = 88 (36.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCT 219
+ V V S +G+++I +L+++G VKALV K ++ ++ VE+ GD D
Sbjct: 102 EKDVVFVTDGDSDLGQMIILQLIVKGTRVKALV-KDKRKALEAFGSYVELTTGDASDERF 160
Query: 220 LKAAVENCNKII 231
LK A + +I
Sbjct: 161 LKKAFKGVGAVI 172
>TAIR|locus:2040854 [details] [associations]
symbol:AT2G34460 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR016040
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0009941 GO:GO:0009535 GO:GO:0010287
EMBL:AC004077 EMBL:AC004481 eggNOG:COG0702 EMBL:AY034977
EMBL:AY056425 EMBL:BT000884 IPI:IPI00536241 PIR:T02333
RefSeq:NP_565789.2 UniGene:At.48549 UniGene:At.60259
ProteinModelPortal:Q8H124 SMR:Q8H124 IntAct:Q8H124 STRING:Q8H124
PaxDb:Q8H124 PRIDE:Q8H124 EnsemblPlants:AT2G34460.1 GeneID:818009
KEGG:ath:AT2G34460 TAIR:At2g34460 HOGENOM:HOG000262433
InParanoid:Q8H124 OMA:NFRAVEL PhylomeDB:Q8H124 ProtClustDB:PLN00141
Genevestigator:Q8H124 Uniprot:Q8H124
Length = 280
Score = 101 (40.6 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPR-SVEIVLGDVGD-PCTLK 221
V V GAT + G+ ++ +L+ RG++VKA VR ++ S++IV DV + P L
Sbjct: 49 VFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEGPDKLA 108
Query: 222 AAVENCNKIIYCATA-RSTITGDLF---RVDYQGVYNVTKA 258
+ + ++ + CAT R D+F +VD G N+ A
Sbjct: 109 EVIGDDSQAVICATGFRPGF--DIFTPWKVDNFGTVNLVDA 147
Score = 95 (38.5 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 487 LKAKRDGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRITQGISCAD-VADICVK 545
L AK E +++SG+ YTI+RPG LK +P ++ + + + +G D VA++ V+
Sbjct: 187 LVAKLQAEKYIKKSGINYTIVRPGGLKNDPPTGN-VVMEPEDTLYEGSISRDLVAEVAVE 245
Query: 546 AL 547
AL
Sbjct: 246 AL 247
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCT 219
+N +LV G+T +G + L+ RG+SV+ALVR+ ++ D LP VE+ GDV D +
Sbjct: 11 ENMKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTS-DLSD-LPPEVELAYGDVTDYRS 68
Query: 220 LKAAVENCNKIIYCATARSTITGDLFR---VDYQGVYNVTKAFQD 261
L A C+ + + A D R V+ G+ NV +A ++
Sbjct: 69 LTDACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKE 113
>TAIR|locus:2122083 [details] [associations]
symbol:HCF244 "high chlorophyll fluorescence phenotype
244" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009637 "response
to blue light" evidence=RCA] [GO:0010114 "response to red light"
evidence=RCA] [GO:0010218 "response to far red light" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0003743
"translation initiation factor activity" evidence=IMP] [GO:0010207
"photosystem II assembly" evidence=IMP] InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0003743 GO:GO:0009534 EMBL:AL022604
EMBL:AL161587 GO:GO:0010207 eggNOG:COG0702 InterPro:IPR008030
Pfam:PF05368 EMBL:AF462834 EMBL:AY133542 IPI:IPI00547139 PIR:T06132
RefSeq:NP_195251.1 UniGene:At.21262 ProteinModelPortal:O65502
SMR:O65502 IntAct:O65502 STRING:O65502 PaxDb:O65502 PRIDE:O65502
EnsemblPlants:AT4G35250.1 GeneID:829678 KEGG:ath:AT4G35250
TAIR:At4g35250 HOGENOM:HOG000111358 InParanoid:O65502 OMA:EWGCELT
PhylomeDB:O65502 ProtClustDB:CLSN2686059 ArrayExpress:O65502
Genevestigator:O65502 Uniprot:O65502
Length = 395
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 157 PGA--QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDV 214
PG + T++LVVGAT +GR ++R+ + GY V+ LVR + +V D+
Sbjct: 73 PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADL 132
Query: 215 GDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQG 251
P T+ A + + +I CAT R + VD++G
Sbjct: 133 SKPETIPATLVGIHTVIDCATGRPE--EPIKTVDWEG 167
>TAIR|locus:2180019 [details] [associations]
symbol:PCB2 "PALE-GREEN AND CHLOROPHYLL B REDUCED 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0015995
"chlorophyll biosynthetic process" evidence=RCA;IMP;TAS]
[GO:0051744 "3,8-divinyl protochlorophyllide a 8-vinyl reductase
activity" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0009073 "aromatic amino acid family biosynthetic
process" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016117 "carotenoid biosynthetic process"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0019344
"cysteine biosynthetic process" evidence=RCA] [GO:0030154 "cell
differentiation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR016040
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0009941 GO:GO:0009534 GO:GO:0015995
eggNOG:COG0702 EMBL:BT025627 IPI:IPI00539374 RefSeq:NP_197367.1
UniGene:At.21772 ProteinModelPortal:Q1H537 SMR:Q1H537 IntAct:Q1H537
STRING:Q1H537 PaxDb:Q1H537 PRIDE:Q1H537 EnsemblPlants:AT5G18660.1
GeneID:831984 KEGG:ath:AT5G18660 TAIR:At5g18660
HOGENOM:HOG000251228 InParanoid:Q1H537 OMA:ICVQKPL PhylomeDB:Q1H537
ProtClustDB:PLN02657 Genevestigator:Q1H537 GO:GO:0051744
Uniprot:Q1H537
Length = 417
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 36/137 (26%), Positives = 66/137 (48%)
Query: 140 SLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR------ 193
SLD+ + F ++ VLVVG+T IGR V+++++ RG++V A+ R
Sbjct: 62 SLDSGISEIATSPSFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGFNVIAVAREKSGIR 121
Query: 194 -KADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC----NKIIYCATARSTITGDLFRVD 248
K D+E + + DV + L+ ++EN + ++ C +R+ D +++D
Sbjct: 122 GKNDKEETLKQLQGANVCFSDVTELDVLEKSIENLGFGVDVVVSCLASRNGGIKDSWKID 181
Query: 249 YQGVYNVTKAFQDFNNK 265
Y+ N A + F K
Sbjct: 182 YEATKNSLVAGKKFGAK 198
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 597 554 0.00098 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 616 (65 KB)
Total size of DFA: 301 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.79u 0.09s 40.88t Elapsed: 00:00:02
Total cpu time: 40.80u 0.09s 40.89t Elapsed: 00:00:02
Start: Tue May 21 14:39:07 2013 End: Tue May 21 14:39:09 2013